BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020257
(328 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/302 (83%), Positives = 271/302 (89%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + GENGTIDGQG +WWNMWRQRTL FTRPNL+EF+NSR IIISNVIF+NSPFWNI
Sbjct: 111 LQDVIITGENGTIDGQGDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNI 170
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVY NVVIRYVTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI
Sbjct: 171 HPVYSRNVVIRYVTILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 230
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
AYG PSS ITIRR+TGSSPFSGIAVGSETSGGV+NVL E++NLYN+GVGIH+KTNIGRGG
Sbjct: 231 AYGRPSSDITIRRITGSSPFSGIAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGG 290
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 266
FI+NITV+DVYMEN RKGIKIAGDVGDHPDD FNPNALPVV GIT+K +WG KVQQ G I
Sbjct: 291 FIKNITVTDVYMENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSI 350
Query: 267 QGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 326
QGLKNSPFTGICLSNINL GV GP S P KCSDVSGSA V PWPCSEL+S QTG+CS+
Sbjct: 351 QGLKNSPFTGICLSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPCSELTSPHQTGSCSD 410
Query: 327 HF 328
HF
Sbjct: 411 HF 412
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/301 (82%), Positives = 270/301 (89%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ GENGTIDGQG IWWNMWRQRTL FTRPNL+EF+NSR IIISNVIFQNSPFWNI
Sbjct: 145 LHDVVITGENGTIDGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNI 204
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVVIR+VTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI
Sbjct: 205 HPVYCSNVVIRFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 264
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
AYG PSS ITIRR+TGSSPF+GIAVGSETSGGVE+VLAE+INLY++GVG+HVKTNIGRGG
Sbjct: 265 AYGRPSSHITIRRITGSSPFAGIAVGSETSGGVEHVLAENINLYDMGVGLHVKTNIGRGG 324
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 266
FIRNIT SDVYM+NARKGIKIAGDVGDHPDD +NPNALPVV GI + VWG V Q G I
Sbjct: 325 FIRNITFSDVYMKNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAI 384
Query: 267 QGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 326
QGLK+SPFTGICLSNINL GV GP S P KCSDVSG+A +V P+PCSEL+++ QTG+CS+
Sbjct: 385 QGLKSSPFTGICLSNINLHGVPGPRSTPWKCSDVSGAALEVSPFPCSELATTHQTGSCSD 444
Query: 327 H 327
H
Sbjct: 445 H 445
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/300 (80%), Positives = 271/300 (90%), Gaps = 1/300 (0%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
+ + GENGTIDGQG WWN WRQ TL FTRPNL+EF+NSR IIISNVIF+NSPFWNIH
Sbjct: 147 QDVVITGENGTIDGQGDAWWNKWRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIH 206
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
PVYCSNVV+RYVTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA
Sbjct: 207 PVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 266
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
YG PSS ITIRR+TGSSPF+GIA+GSETSGGVENVLAEHINLYN+G+GIH+KTN GRGGF
Sbjct: 267 YGRPSSDITIRRITGSSPFAGIAIGSETSGGVENVLAEHINLYNMGIGIHIKTNTGRGGF 326
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
I+NIT+S VYME ARKGI+I+GDVGDHPDDKF+ NALP+V G+TIK+VWG KV Q+GLIQ
Sbjct: 327 IKNITMSHVYMEEARKGIRISGDVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQ 386
Query: 268 GLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNH 327
GL+NSPFT ICL +INL GV GP +PP KCSDVSG A+QV PWPCSELSS+QQ G+C+N+
Sbjct: 387 GLRNSPFTDICLYDINLHGVTGPRTPPWKCSDVSGFAHQVSPWPCSELSSNQQ-GSCANY 445
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/309 (77%), Positives = 271/309 (87%), Gaps = 1/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + GENGTIDGQG +WWNMWRQRTL FTRPNL+EF+NS+ IIISNV
Sbjct: 166 RYMSFIHGDGLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNV 225
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
IF+NSPFWNIHPVYCSNVV+RYVTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVA
Sbjct: 226 IFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 285
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSGWDEYGIAYG PS GITIRR+TGSSPF+GIA+GSETSGGVENVLAEHINL+N+GVGI
Sbjct: 286 VKSGWDEYGIAYGRPSYGITIRRLTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGVGI 345
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGG I+NITV+ VY+ENAR+GIKIAGDVG HPD+KFNPNALPVV GITIK+VW
Sbjct: 346 HIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVW 405
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G +V Q+GLI GL+NSPFT +CLSNIN G+ GP SP KCSDV G A+QV PWPCS+L
Sbjct: 406 GVRVNQAGLIHGLRNSPFTDVCLSNINFHGMRGPRSPSWKCSDVFGFAHQVSPWPCSQL- 464
Query: 317 SSQQTGACS 325
SSQ+ G+C+
Sbjct: 465 SSQEPGSCA 473
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/309 (77%), Positives = 271/309 (87%), Gaps = 1/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + GENGTIDGQG +WWNMWRQRTL FTRPNL+EF+NS+ IIISNV
Sbjct: 134 RYMSFIHGDGLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNV 193
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
IF+NSPFWNIHPVYCSNVV+RYVTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVA
Sbjct: 194 IFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 253
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSGWDEYGIAYG PS GITIRRVTGSSPF+GIA+GSETSGGVENVLAEHINL+N+GVGI
Sbjct: 254 VKSGWDEYGIAYGRPSYGITIRRVTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGVGI 313
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGG I+NITV+ VY+ENAR+GIKIAGDVG HPD+KFNPNALPVV GITIK+VW
Sbjct: 314 HIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVW 373
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G KV Q+GLI GL+NSPFT +CLS+IN G+ GP SP KCSDV G A+QV PWPCS+L
Sbjct: 374 GVKVNQAGLIHGLRNSPFTDVCLSDINFHGMEGPRSPSWKCSDVFGFAHQVSPWPCSQL- 432
Query: 317 SSQQTGACS 325
SSQ+ G+C+
Sbjct: 433 SSQEPGSCA 441
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/310 (78%), Positives = 266/310 (85%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + GENGTIDGQG +WWNMWRQRTL FTRPNLIE +NSR+IIISNV
Sbjct: 136 RYMSFIHADGVHDVIITGENGTIDGQGEVWWNMWRQRTLQFTRPNLIELINSRNIIISNV 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
IF++SPFWNIHPVYC NVV+++VTILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVA
Sbjct: 196 IFRDSPFWNIHPVYCRNVVVQFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSGWDEYGIAYG PSSGITIRR+TGSSPF+GIAVGSETSGGV+NV AEHINLYN+GVGI
Sbjct: 256 VKSGWDEYGIAYGRPSSGITIRRITGSSPFAGIAVGSETSGGVQNVFAEHINLYNMGVGI 315
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTNIGRGG IRNITVS+VYME AR GIKIAGDVGDHPDD FNPNALPVV G+ I+DVW
Sbjct: 316 HLKTNIGRGGVIRNITVSNVYMEKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVW 375
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G V Q G I GLKNSPFTGICLS INL G P + P KCSDVSG+A V PWPCSEL+
Sbjct: 376 GLDVLQPGSIIGLKNSPFTGICLSKINLHGKIKPGTAPWKCSDVSGAAVGVSPWPCSELT 435
Query: 317 SSQQTGACSN 326
S QTG+CS+
Sbjct: 436 SPGQTGSCSS 445
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/304 (76%), Positives = 268/304 (88%), Gaps = 3/304 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + GENGTIDGQG +WWNMWR+RTL FTRPNL+EF+NS+ IIISNVIF++SPFWNI
Sbjct: 148 LQDVVITGENGTIDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNI 207
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVVIR+ TILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI
Sbjct: 208 HPVYCSNVVIRFATILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 267
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
AYG SS ITIRRV+GSSPF+GIAVGSETSGGVEN+LAEHINLYN+G+GIH+KTNIGRGG
Sbjct: 268 AYGRSSSNITIRRVSGSSPFAGIAVGSETSGGVENILAEHINLYNMGIGIHIKTNIGRGG 327
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 266
+I+NI VS+VY+ENARKGIKI+GDVGDH DDK++ NALP+V GIT+ +VWG KV Q+GLI
Sbjct: 328 YIKNINVSNVYIENARKGIKISGDVGDHADDKYDSNALPIVKGITMANVWGVKVLQAGLI 387
Query: 267 QGLKNSPFTGICLSNINLQGVAGPTS--PPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 324
+G+K+SPFT ICLS+INL GV G S P +CSDVSG A QV PWPCSEL S Q G+C
Sbjct: 388 KGMKHSPFTDICLSDINLHGVNGTRSRTPSWQCSDVSGVALQVSPWPCSEL-ISHQLGSC 446
Query: 325 SNHF 328
+N++
Sbjct: 447 ANYY 450
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/301 (74%), Positives = 259/301 (86%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
+ GENGTIDGQG WWNMWR TL +TRP+L+EF+NS +IIISNV+F NSPFWNIH
Sbjct: 145 HDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIH 204
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
PVYC NVV+RYVTILAP DSPNTDG+DPDSS+NVCIEDSYISTGDDLVAVKSGWDEYGIA
Sbjct: 205 PVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIA 264
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
YG S ITIRR++GSSPF+G+AVGSE SGGV NVLAEH+N Y++GVGI++KTNIGRGGF
Sbjct: 265 YGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGF 324
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
I+NITVS+VYMEN+RKG+KIAGD GDHPDDKF+PNALP+V ITIK++WG VQQ+G I
Sbjct: 325 IKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIY 384
Query: 268 GLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNH 327
GL++SPFTGICLSNINL+G P S P CS VSG+A V PWPCSEL+S+ Q G CS++
Sbjct: 385 GLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSELTSTDQDGLCSDN 444
Query: 328 F 328
F
Sbjct: 445 F 445
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/312 (69%), Positives = 258/312 (82%), Gaps = 1/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + G+NGTIDGQG +WWNMWR RTL +TRPNLIEF +S+ IIISNV
Sbjct: 134 RYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNV 193
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
IFQNSPFWNIHPVYCSNVVI +VTILAP DSPNTDGIDPDSS NVCIEDSYISTGDDLVA
Sbjct: 194 IFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVA 253
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWD+YGIAYG PSS ITIRR+TGSSPF+GIA+GSETSGG++N++AEHI L N+GVG+
Sbjct: 254 IKSGWDQYGIAYGRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIIAEHITLSNMGVGV 313
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
++KTNIGRGG+I+NI +SDVY++ A+ GIKIAGD GDHPD+ +NPNALPVV GI IK+VW
Sbjct: 314 NIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVW 373
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G V+ +G IQGLK SPFTGICLS INL G + KCSDVSG++ +V PWPCSEL
Sbjct: 374 GVNVRNAGSIQGLKGSPFTGICLSEINLHGSLN-SYKTWKCSDVSGTSLKVSPWPCSELR 432
Query: 317 SSQQTGACSNHF 328
++ + CS+ F
Sbjct: 433 TTGGSNLCSSTF 444
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/312 (69%), Positives = 258/312 (82%), Gaps = 1/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + G+NGTIDGQG +WWNMWR RTL +TRPNLIEF +S+ IIISNV
Sbjct: 134 RYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNV 193
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
IFQNSPFWNIHPVYCSNVVI +VTILAP DSPNTDGIDPDSS NVCIEDSYISTGDDLVA
Sbjct: 194 IFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVA 253
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSS ITIRR+TGSSPF+GIA+GSETSGG++N++AEHI L N+GVG+
Sbjct: 254 IKSGWDEYGIAYGRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIVAEHITLSNMGVGV 313
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
++KTNIGRGG+I+NI +SDVY++ A+ GIKIAGD GDHPD+ +NPNALP+V GI IK+VW
Sbjct: 314 NIKTNIGRGGYIKNIKISDVYIDTAKYGIKIAGDTGDHPDENYNPNALPIVKGIHIKNVW 373
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G V+ +G IQGLK SPFTGICLS INL G + KCSDV G++ +V PWPCSEL
Sbjct: 374 GVNVRNAGSIQGLKGSPFTGICLSEINLHGSLN-SYKTWKCSDVIGTSLKVSPWPCSELR 432
Query: 317 SSQQTGACSNHF 328
++ + +CS+ F
Sbjct: 433 TTGGSYSCSSTF 444
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/289 (74%), Positives = 246/289 (85%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + GENGTIDGQG WWN W+QRTL FTRPNL+EF+NSR IIISNV
Sbjct: 157 RYMSFIHGDGVXDVVITGENGTIDGQGDEWWNKWKQRTLQFTRPNLVEFVNSRDIIISNV 216
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
IF++SPFWNIHP CSNVV+RYVTILAP DSPNTDGIDP SSSNVCIEDSYISTGDDLVA
Sbjct: 217 IFKSSPFWNIHPFLCSNVVVRYVTILAPRDSPNTDGIDPHSSSNVCIEDSYISTGDDLVA 276
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
KSGWDEYGI YG PSS ITIRRVTGSSPF+GIA+GSETSGGVENVL+EHINLYN+G+GI
Sbjct: 277 EKSGWDEYGIVYGRPSSDITIRRVTGSSPFAGIAIGSETSGGVENVLSEHINLYNMGIGI 336
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GR G+I+NIT+S VYME ARKGI+I+GDVGDHPDDK++PNALP+V G+TIK+VW
Sbjct: 337 HIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHPDDKYDPNALPLVKGVTIKNVW 396
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY 305
G KV Q+GLIQGL + PF IC +INL GV GP +PP KC+DVSG A+
Sbjct: 397 GVKVLQAGLIQGLSSXPFRDICQYDINLHGVTGPRTPPWKCTDVSGFAH 445
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/312 (68%), Positives = 254/312 (81%), Gaps = 1/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + G+NGTIDGQG +WWNMW RTL +TRPNLIEF +S+ IIISNV
Sbjct: 134 RYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWHSRTLKYTRPNLIEFKDSKEIIISNV 193
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
IFQNSPFWNIHPVYCSNVVI +VTILAP DSPNTDGIDPDSS NVCIEDSYISTGDDLVA
Sbjct: 194 IFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVA 253
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSS ITIRR+TGSSPF+GIA+GSETSGG++N++AEHI L N+GVG+
Sbjct: 254 IKSGWDEYGIAYGRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIVAEHITLSNMGVGV 313
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
++KTNIGRGG+I+NI +SDVY++ A+ GIKI GD GDHPD+ +NPNALP+V GI IK+VW
Sbjct: 314 NIKTNIGRGGYIKNIKISDVYIDTAKYGIKITGDTGDHPDENYNPNALPIVKGIHIKNVW 373
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G V+ +G IQGLK SPFTGICLS INL G + KCSDV G++ +V PWPCSEL
Sbjct: 374 GVNVRNAGSIQGLKGSPFTGICLSEINLHGSLN-SYKTWKCSDVIGTSLKVSPWPCSELR 432
Query: 317 SSQQTGACSNHF 328
++ CS+ F
Sbjct: 433 TTGGYNLCSSTF 444
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/310 (65%), Positives = 255/310 (82%), Gaps = 2/310 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + GENGTIDGQG++WW+MWR+RTLPFTRP+L+E ++S +IISNV
Sbjct: 167 RYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNV 226
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVI VT+LAP DSPNTDGIDPDSSSNVCIEDSYISTGDDL++
Sbjct: 227 VFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLIS 286
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIA+G PSSGITIRR+TGS PF+G AVGSETSGGVENV EH+N + +GVGI
Sbjct: 287 IKSGWDEYGIAFGRPSSGITIRRITGSGPFAGFAVGSETSGGVENVHVEHLNFFGMGVGI 346
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
HVKTN GRGGFIRNITVS+V + AR G++IAGDVG HPD ++P+ LPVV+G+TIK+VW
Sbjct: 347 HVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVW 406
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++Q+GL++G+++S F+ ICLSN+ L G G + P KC VSG A V+P PC+EL+
Sbjct: 407 GQNIRQAGLVRGIRDSVFSRICLSNVKLYG--GDSVGPWKCRAVSGGALDVQPSPCAELT 464
Query: 317 SSQQTGACSN 326
S+ + C+N
Sbjct: 465 STSEMSFCTN 474
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/310 (65%), Positives = 255/310 (82%), Gaps = 2/310 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + GENGTIDGQG++WW+MWR+RTLPFTRP+L+E ++S +IISNV
Sbjct: 141 RYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNV 200
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVI VT+LAP DSPNTDGIDPDSSSNVCIEDSYISTGDDL++
Sbjct: 201 VFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLIS 260
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIA+G PSSGITIRR+TGS PF+G AVGSETSGGVENV EH+N + +GVGI
Sbjct: 261 IKSGWDEYGIAFGRPSSGITIRRITGSGPFAGFAVGSETSGGVENVHVEHLNFFGMGVGI 320
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
HVKTN GRGGFIRNITVS+V + AR G++IAGDVG HPD ++P+ LPVV+G+TIK+VW
Sbjct: 321 HVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVW 380
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++Q+GL++G+++S F+ ICLSN+ L G G + P KC VSG A V+P PC+EL+
Sbjct: 381 GQNIRQAGLVRGIRDSVFSRICLSNVKLYG--GDSVGPWKCRAVSGGALDVQPSPCAELT 438
Query: 317 SSQQTGACSN 326
S+ + C+N
Sbjct: 439 STSEMSFCTN 448
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/310 (65%), Positives = 255/310 (82%), Gaps = 2/310 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + GENGTIDGQG++WW+MWR+RTLPFTRP+L+E ++S +IISNV
Sbjct: 141 RYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNV 200
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVI VT+LAP DSPNTDGIDPDSSSNVCIEDSYISTGDDL++
Sbjct: 201 VFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLIS 260
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIA+G PSSGITIRR+TGS PF+G AVGSETSGGVENV EH+N + +GVGI
Sbjct: 261 IKSGWDEYGIAFGRPSSGITIRRITGSGPFAGFAVGSETSGGVENVHVEHLNFFGMGVGI 320
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
HVKTN GRGGFIRNITVS+V + AR G++IAGDVG HPD ++P+ LPVV+G+TIK+VW
Sbjct: 321 HVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVW 380
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++Q+GL++G+++S F+ ICLSN+ L G G + P KC VSG A V+P PC+EL+
Sbjct: 381 GQNIRQAGLVRGIRDSVFSRICLSNVKLYG--GDSVGPWKCRAVSGGALDVQPSPCAELT 438
Query: 317 SSQQTGACSN 326
S+ + C+N
Sbjct: 439 STSEMSFCTN 448
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/312 (66%), Positives = 248/312 (79%), Gaps = 3/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + G NGTIDGQG WWNMWR TL FTRP LIEF NS +I++S+V
Sbjct: 139 RYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHV 198
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+ QNSPFW +HPVYCSNVV+ +VTILAP DS NTDGIDPDSSSNVCIEDSYISTGDDLVA
Sbjct: 199 VLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVA 258
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSGWDEYGIAY PS ITIRR+TGSSPF+GIA+GSETSGG++NV E+I LYN G+GI
Sbjct: 259 VKSGWDEYGIAYNRPSRDITIRRITGSSPFAGIAIGSETSGGIQNVTVENITLYNSGIGI 318
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTNIGRGG I+ IT+S VY+E R GIKI+GD GDHPDDKFN +ALP+V GITIK+VW
Sbjct: 319 HIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVW 378
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G KV+++G++QGLK+SPFT +C SN+ L G SP KCSDV G+A +V P PC ELS
Sbjct: 379 GIKVERAGMVQGLKDSPFTNLCFSNVTLTGTK--RSPIWKCSDVVGAADKVNPTPCPELS 436
Query: 317 -SSQQTGACSNH 327
++QQ G+C N
Sbjct: 437 ATTQQGGSCENQ 448
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/310 (65%), Positives = 256/310 (82%), Gaps = 2/310 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + + GENGTIDGQG++WW+MW++RTLPFTRP+L+E M S +++SNV
Sbjct: 132 RYMSLIHGNGLQDVFITGENGTIDGQGSLWWDMWKKRTLPFTRPHLLELMYSTDVVVSNV 191
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVI VT+LAP DSPNTDGID DSSSNVCIEDSYIS GDDL++
Sbjct: 192 VFQDSPFWNIHPVYCSNVVIANVTVLAPHDSPNTDGIDLDSSSNVCIEDSYISAGDDLIS 251
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIA+G PSSGITIRR+TGS PF+G AVGSETSGGVENVL EH+NL+ +GVGI
Sbjct: 252 IKSGWDEYGIAFGRPSSGITIRRITGSGPFAGFAVGSETSGGVENVLVEHLNLFGMGVGI 311
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGGFIRNITVS+V + AR G++IAGDVG HPD +NP+ LPVVN +TIK+V
Sbjct: 312 HIKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYNPSVLPVVNSVTIKNVL 371
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++Q+GLI+G++NS F+ ICLSN+ L G A + P KC VSG+A V+P PC+EL+
Sbjct: 372 GQNIRQAGLIRGIRNSVFSNICLSNVKLYGSA--SIGPWKCRAVSGAALDVQPSPCTELA 429
Query: 317 SSQQTGACSN 326
S+ +TG C++
Sbjct: 430 STSETGFCTS 439
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/302 (67%), Positives = 244/302 (80%), Gaps = 3/302 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDGQG WWNMWR TL FTRP LIEF NS +I++S+V+ QNS FW +
Sbjct: 149 LNDVVITGRNGTIDGQGEPWWNMWRHGTLEFTRPGLIEFKNSTNIVVSHVVLQNSAFWTL 208
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVV+ +VTILAP DS NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI
Sbjct: 209 HPVYCSNVVVHHVTILAPTDSFNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 268
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
AY PS ITIRR+TGSSPF+GIA+GSETSGG++NV E+I LYN G+GIH+KTNIGRGG
Sbjct: 269 AYNLPSRDITIRRITGSSPFAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGG 328
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 266
I+ IT+S VY+E R GIKI+GD GDHPDDKFN +ALP+V GITIK+VWG KV+++G++
Sbjct: 329 SIQGITISGVYLEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMV 388
Query: 267 QGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGACS 325
QGLK+SPFT +C SN+ L G ++P KCSDV G+A +V P PC EL +++QQ G+C
Sbjct: 389 QGLKDSPFTNLCFSNVTLTGTK--STPIWKCSDVVGAASKVNPTPCPELTTTTQQGGSCE 446
Query: 326 NH 327
N
Sbjct: 447 NQ 448
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/312 (65%), Positives = 249/312 (79%), Gaps = 2/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + + GENGTIDGQG+ WW+MW+ RTL +TRP+L+E M+S II+SNV
Sbjct: 137 RYTSLIHGNGLQDVVITGENGTIDGQGSAWWDMWKNRTLLYTRPHLLELMSSSDIIVSNV 196
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVIR VTILAP DSPNTDGIDPDSSSN+CIED YISTGDD +A
Sbjct: 197 VFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIA 256
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG SSGIT+RR+TGSSPF+G AVGSETSGGVENVLAEH+N +N G GI
Sbjct: 257 IKSGWDEYGIAYGRASSGITVRRITGSSPFAGFAVGSETSGGVENVLAEHLNFFNSGFGI 316
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
HVKTN GRGGFIRNITVSDV ++N R G++I GDVG+HPDD +N +ALP+V+ +T+K+V
Sbjct: 317 HVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQ 376
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G V+++GLI+G+ NS F+ ICLSN+ G G P KC VSG A V+P PC+EL+
Sbjct: 377 GQNVREAGLIKGIPNSAFSRICLSNVKFTG--GAPVRPWKCEAVSGGALDVQPSPCTELT 434
Query: 317 SSQQTGACSNHF 328
S+ T C+N
Sbjct: 435 STSGTSFCTNSL 446
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/312 (65%), Positives = 253/312 (81%), Gaps = 2/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + + GENGTIDGQG++WW+MW++ TLPFTRP+L+E M+S + I+SN+
Sbjct: 141 RYISLIHGNGLQDVFITGENGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNL 200
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVIR +TILAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A
Sbjct: 201 VFQDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIA 260
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSS ITIRR+TGSSPF+G +VGSETSGGVENVLAEH+N Y+ G G+
Sbjct: 261 IKSGWDEYGIAYGRPSSDITIRRITGSSPFAGFSVGSETSGGVENVLAEHLNFYSSGFGV 320
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGGFIRNITVSDV ++N R G++IAGDVG HPD+++N NALP+V+ + IK+V
Sbjct: 321 HIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQ 380
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++++GLI+G+ NS F+ ICLSNI L G A P P KC VSG A V+P PC+EL+
Sbjct: 381 GQNIKEAGLIKGIPNSAFSRICLSNIKLHGSA-PVR-PWKCQAVSGGALDVQPSPCTELT 438
Query: 317 SSQQTGACSNHF 328
S C+N
Sbjct: 439 SMSGMSFCTNSL 450
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/312 (65%), Positives = 253/312 (81%), Gaps = 2/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + + GENGTIDGQG++WW+MW++ TLPFTRP+L+E M+S + I+SN+
Sbjct: 141 RYISLIHGNGLQDVFITGENGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNL 200
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVIR +TILAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A
Sbjct: 201 VFQDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIA 260
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSS ITIRR+TGSSPF+G +VGSETSGGVENVLAEH+N Y+ G G+
Sbjct: 261 IKSGWDEYGIAYGRPSSDITIRRITGSSPFAGFSVGSETSGGVENVLAEHLNFYSSGFGV 320
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGGFIRNITVSDV ++N R G++IAGDVG HPD+++N NALP+V+ + IK+V
Sbjct: 321 HIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQ 380
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++++GLI+G+ NS F+ ICLSNI L G A P P KC VSG A V+P PC+EL+
Sbjct: 381 GQNIKEAGLIKGIPNSAFSRICLSNIKLHGSA-PVR-PWKCQAVSGGALDVQPSPCTELT 438
Query: 317 SSQQTGACSNHF 328
S C+N
Sbjct: 439 SMSGMSFCTNSL 450
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/312 (64%), Positives = 251/312 (80%), Gaps = 2/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S S + + GENGTIDGQG WW+MW++ TL +TRP+L+E M+S II+SNV
Sbjct: 138 RYISLIHGSGLQDVVITGENGTIDGQGTPWWDMWKKGTLLYTRPHLLELMSSSHIIVSNV 197
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVIR VTILAP DSPNTDGIDPDSSSN+CIED YISTGDD +A
Sbjct: 198 VFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIA 257
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSS IT+RR+TGSSPF+G AVGSETSGGVENVLAEH+N ++ G GI
Sbjct: 258 IKSGWDEYGIAYGRPSSDITVRRITGSSPFAGFAVGSETSGGVENVLAEHLNFFSSGFGI 317
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGGFIRN+TVSDV ++N R G++I GDVG+HPD+++N +ALP+V+ +TIK+V
Sbjct: 318 HIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHPDERYNRSALPIVDALTIKNVQ 377
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++++GLI+G+ NS F+ ICLSN+ L G G P KC VSG A V+P PC+EL+
Sbjct: 378 GQNIKEAGLIKGIANSAFSRICLSNVKLTG--GAPVQPWKCEAVSGGALDVQPSPCTELT 435
Query: 317 SSQQTGACSNHF 328
S+ T C+N
Sbjct: 436 STSGTSFCTNSL 447
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/312 (63%), Positives = 251/312 (80%), Gaps = 2/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + + G NGTIDGQG++WW+MW++ TLPFTRP+L+E M+S +I+SN+
Sbjct: 139 RYKSLIHGNGLQDVFITGANGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSDVIVSNL 198
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+F++SPFWNIHPVYCSNVVIR +TILAP DSPNTDGIDPDSSSNVCIED YISTGDDLVA
Sbjct: 199 VFRDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVA 258
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSS IT+RR+TGSSPF+G AVGSETSGGVENVLAEH+N ++ G G+
Sbjct: 259 IKSGWDEYGIAYGRPSSDITVRRITGSSPFAGFAVGSETSGGVENVLAEHLNFFSSGFGV 318
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGGFIRN+TVSDV ++N R G++IAGDVGDHPD+ +N NALP V+ +TIK+V
Sbjct: 319 HIKTNSGRGGFIRNVTVSDVTLDNVRYGLRIAGDVGDHPDEHYNHNALPKVDSLTIKNVQ 378
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++++G I+G+ +S F+ ICLSNI L G P P KC VSG A ++P PC+EL+
Sbjct: 379 GQNIKEAGSIKGIASSAFSRICLSNIKLHGSV-PVR-PWKCESVSGGALDLQPSPCTELT 436
Query: 317 SSQQTGACSNHF 328
S+ T C+N
Sbjct: 437 STSGTSFCTNSL 448
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/309 (61%), Positives = 249/309 (80%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + GENGTIDGQG +WW+MW++RTLPFTRP+L+E M S +++SN+
Sbjct: 138 RYMSLIHGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNL 197
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVI +T+LAP DSPNTDGID DSSSNVC+ED YIS GDDL++
Sbjct: 198 VFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLIS 257
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYG+A+G PSSGIT+RR+TGS PF+G AVGSETSGGVE+V+AEH++ VGVG+
Sbjct: 258 IKSGWDEYGVAFGRPSSGITVRRITGSGPFAGFAVGSETSGGVEDVVAEHLSFSGVGVGV 317
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
HVKTN GRGGFIRN+TVS V ++ AR G++IAGDVG HP +N + LPVV+G+ +++VW
Sbjct: 318 HVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVVDGVAVRNVW 377
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G V+Q+GLI+G+++S F+ ICLSN+ L G+ + P +C VSGSA V+P PC+EL+
Sbjct: 378 GRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAELA 437
Query: 317 SSQQTGACS 325
S+ TG C+
Sbjct: 438 STSGTGFCT 446
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 188/309 (60%), Positives = 249/309 (80%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + GENGTIDGQG +WW+MW++RTLPFTRP+L+E M S +++SN+
Sbjct: 150 RYMSLIHGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNL 209
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVI +T+LAP DSPNTDGID DSSSNVC+ED YIS GDDL++
Sbjct: 210 VFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLIS 269
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYG+A+G PSSGIT+RR+TGS PF+G AVGSETSGGVE+V+AEH++ VGVG+
Sbjct: 270 IKSGWDEYGVAFGRPSSGITVRRITGSGPFAGFAVGSETSGGVEDVVAEHLSFSGVGVGV 329
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
HVKTN GRGGFIRN+TVS V ++ AR G++IAGDVG HP +N + LPV++G+ +++VW
Sbjct: 330 HVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVIDGVAVRNVW 389
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G V+Q+GLI+G+++S F+ ICLSN+ L G+ + P +C VSGSA V+P PC+EL+
Sbjct: 390 GRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAELA 449
Query: 317 SSQQTGACS 325
S+ TG C+
Sbjct: 450 STSGTGFCT 458
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/309 (64%), Positives = 240/309 (77%), Gaps = 2/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S I G+ G IDGQG +WWNMWRQRTL TRPNL+EFM+S I ISN+
Sbjct: 136 RYTSFIHGDGLRDIVITGDKGIIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNI 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+ +NSPFWNIHPVYC NVVI + I+AP DSPNTDG+DPDSS+NVCIEDSYISTGDDLVA
Sbjct: 196 VLKNSPFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSSGITIRRV GSSPFSGIA+GSE SGGV NVL E +++N G GI
Sbjct: 256 IKSGWDEYGIAYGRPSSGITIRRVRGSSPFSGIAIGSEASGGVSNVLVEDCSIFNSGYGI 315
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTNIGRGGFIRNITV +V M + R G++IAGDVGDHPD+ F+ ALP V+ ++IK+VW
Sbjct: 316 HIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVW 375
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G VQQ G I+G++NSPFT ICL+N+ L G + KC DV G+A V+P PC+EL+
Sbjct: 376 GVNVQQPGSIEGIRNSPFTRICLANVKLFGWR--NNAAWKCRDVHGAALGVQPGPCAELT 433
Query: 317 SSQQTGACS 325
+S +G CS
Sbjct: 434 TSLSSGFCS 442
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/309 (64%), Positives = 241/309 (77%), Gaps = 2/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + G+ G IDGQG +WWNMWRQRTL TRPNL+EFM+S I ISN+
Sbjct: 136 RYASFIHGDGLHDVVITGDKGIIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNI 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+ +NSPFWNIHPVYC NVVI + I+AP DSPNTDG+DPDSS+NVCIEDSYISTGDDLVA
Sbjct: 196 VLKNSPFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSSGITIRRV GSSPFSGIA+GSE SGGV +VL E +++N G GI
Sbjct: 256 IKSGWDEYGIAYGRPSSGITIRRVRGSSPFSGIAIGSEASGGVSDVLVEDCSIFNSGYGI 315
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTNIGRGGFIRNITV +V M + R G++IAGDVGDHPD+ F+ ALP V+G++IK+VW
Sbjct: 316 HIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDGVSIKNVW 375
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G VQQ G I+G++NSPFT ICL+N+ L G + KC DV G+A V+P PC+EL+
Sbjct: 376 GVNVQQPGSIEGIRNSPFTRICLANVKLFGWR--NNAAWKCRDVHGAALGVQPGPCAELT 433
Query: 317 SSQQTGACS 325
+S +G CS
Sbjct: 434 TSLSSGFCS 442
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/312 (63%), Positives = 253/312 (81%), Gaps = 2/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + + G+NGTIDGQG+ WW+MW++ TLPFTRP+L+E MNS +++SNV
Sbjct: 136 RYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNV 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCSNVVIR VT+LAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A
Sbjct: 196 VFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYG+AYG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GI
Sbjct: 256 IKSGWDEYGMAYGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGI 315
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGGFIRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V
Sbjct: 316 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 375
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++++G I+G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+
Sbjct: 376 GQNIREAGSIKGIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELT 433
Query: 317 SSQQTGACSNHF 328
S+ C+N
Sbjct: 434 STSGMSFCTNSL 445
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/300 (65%), Positives = 248/300 (82%), Gaps = 2/300 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G+NGTIDGQG+ WW+MW++ TLPFTRP+L+E MNS +++SNV+FQ+SPFWNI
Sbjct: 9 LQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQDSPFWNI 68
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVVIR VT+LAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A+KSGWDEYG+
Sbjct: 69 HPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGM 128
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
AYG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GIH+KTN GRGG
Sbjct: 129 AYGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGG 188
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 266
FIRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V G ++++G I
Sbjct: 189 FIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSI 248
Query: 267 QGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 326
+G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+S+ C+N
Sbjct: 249 KGIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELTSTSGMSFCTN 306
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/302 (60%), Positives = 229/302 (75%), Gaps = 2/302 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + G+ G IDGQG +WWNMWR+RTL TRPNL+EFM+S I ISN+
Sbjct: 143 RYASFIHGDGLRDVVITGDRGVIDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNI 202
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+ +NSPFWNIHPVYC NVV+ + ILAP DSPNTDG+DPDSSSNVCIEDSYISTGDDLVA
Sbjct: 203 VLKNSPFWNIHPVYCDNVVVTNMMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVA 262
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PS+G+T+RRV GSSPFSGIA+GSE SGGV +VL E +++ G GI
Sbjct: 263 IKSGWDEYGIAYGRPSAGVTVRRVRGSSPFSGIAIGSEASGGVRDVLVEDCAIFDSGYGI 322
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN+GRGG+IRN+TV V + R G++IAGDVGDHPD F+ A+P V+ + I +VW
Sbjct: 323 HIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVW 382
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G VQQ G ++G++ SPFT ICLSN+ L G + KC DV G+A V+P PC+EL+
Sbjct: 383 GVNVQQPGSLEGIRASPFTRICLSNVKLFGWR--SDAAWKCRDVRGAALGVQPSPCAELA 440
Query: 317 SS 318
+S
Sbjct: 441 TS 442
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 235/310 (75%), Gaps = 2/310 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + ++ G+ G IDGQG +WWNMWR+RTL TRPNL+EFM+S I ISN+
Sbjct: 138 RYASFIHGNGLRDVAITGDKGVIDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNI 197
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+ +NSPFWNIHPVYC NVV+ + ILAP DSPNTDGIDPDSSSNVCIEDSYISTGDDLVA
Sbjct: 198 VLKNSPFWNIHPVYCDNVVVTNMMILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 257
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PSSGITIRRV GSSPFSGIA+GSE SGGV +VL E ++++ G GI
Sbjct: 258 IKSGWDEYGIAYGRPSSGITIRRVRGSSPFSGIAIGSEASGGVRDVLVEDCSIFDSGYGI 317
Query: 197 HVKTNIGRGGFIRNITVSDVYMENAR-KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
H+KTN+GRGG+IRN+TV +V M R G++IAGDVGDHPD F+ A+P+V+ + I +V
Sbjct: 318 HIKTNVGRGGYIRNVTVDNVRMSGVRISGVRIAGDVGDHPDAHFSQLAVPLVDAVRISNV 377
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
WG VQ G ++G+++SPFT ICLSN+ L G +C DV G+A V+P PC+EL
Sbjct: 378 WGVNVQHPGSLEGIRSSPFTRICLSNVKLFGWR-KNDAAWRCRDVRGAALGVQPSPCAEL 436
Query: 316 SSSQQTGACS 325
++S + S
Sbjct: 437 ATSFASAGSS 446
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/302 (60%), Positives = 229/302 (75%), Gaps = 2/302 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + G+ G IDGQG +WWNMWR+RTL TRPNL+EFM+S I ISN+
Sbjct: 39 RYASFIHGDGLRDVVITGDRGVIDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNI 98
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+ +NSPFWNIHPVYC NVV+ + ILAP DSPNTDG+DPDSSSNVCIEDSYISTGDDLVA
Sbjct: 99 VLKNSPFWNIHPVYCDNVVVTNMMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVA 158
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYGIAYG PS+G+T+RRV GSSPFSGIA+GSE SGGV +VL E +++ G GI
Sbjct: 159 IKSGWDEYGIAYGRPSAGVTVRRVRGSSPFSGIAIGSEASGGVRDVLVEDCAIFDSGYGI 218
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN+GRGG+IRN+TV V + R G++IAGDVGDHPD F+ A+P V+ + I +VW
Sbjct: 219 HIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVW 278
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G VQQ G ++G++ SPFT ICLSN+ L G + KC DV G+A V+P PC+EL+
Sbjct: 279 GVNVQQPGSLEGIRASPFTRICLSNVKLFGWR--SDAAWKCRDVRGAALGVQPSPCAELA 336
Query: 317 SS 318
+S
Sbjct: 337 TS 338
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 207/249 (83%), Gaps = 2/249 (0%)
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
FQ+SPFWNIHPVYCSNVVIR VT+LAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A+
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
KSGWDEYG+AYG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GIH
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGIH 132
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KTN GRGGFIRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V G
Sbjct: 133 IKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQG 192
Query: 258 TKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
++++G I+G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+S
Sbjct: 193 QNIREAGSIKGIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELTS 250
Query: 318 SQQTGACSN 326
+ C+N
Sbjct: 251 TSGMSFCTN 259
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/312 (56%), Positives = 229/312 (73%), Gaps = 28/312 (8%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + + G+NGTIDGQG+ WW+MW++ TLPFTRP+L+E MNS +++SNV
Sbjct: 136 RYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNV 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+FQ+SPFWNIHPVYCS SNVCIED YISTGDDL+A
Sbjct: 196 VFQDSPFWNIHPVYCS--------------------------SNVCIEDCYISTGDDLIA 229
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYG+AYG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GI
Sbjct: 230 IKSGWDEYGMAYGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGI 289
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KTN GRGGFIRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V
Sbjct: 290 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 349
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G ++++G I+G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+
Sbjct: 350 GQNIREAGSIKGIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELT 407
Query: 317 SSQQTGACSNHF 328
S+ C+N
Sbjct: 408 STSGMSFCTNSL 419
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/195 (86%), Positives = 181/195 (92%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGTIDGQG IWWNMWRQ LPFTRPNL+EFMNSR IIISNVIF+NSPFWNI PVYCSN
Sbjct: 18 GENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVIFKNSPFWNIPPVYCSN 77
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VVIRYVTILAP DSPNTDGIDPDSSSNVCIEDS+ISTGDDLVAVKSGWDEYGI YG PSS
Sbjct: 78 VVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAVKSGWDEYGIGYGRPSS 137
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
ITIRRVTGSSPF+GIAVGSETSGGVE+VLAE+I +YN G+G+++KTNIGRGGFI+NITV
Sbjct: 138 HITIRRVTGSSPFAGIAVGSETSGGVEHVLAENIVIYNSGIGVNIKTNIGRGGFIKNITV 197
Query: 214 SDVYMENARKGIKIA 228
S V+MEN R GIKIA
Sbjct: 198 SPVFMENVRTGIKIA 212
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/295 (56%), Positives = 205/295 (69%), Gaps = 3/295 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQG+IWWN + R+L +TRP+L+E MNS ++ISN+ F NSPFW IHPVYCS
Sbjct: 153 GNNGTIDGQGSIWWNRFWNRSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQ 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V ++ V ILAP DSPNTDGIDPDSS NVCIED YISTGDDL+A+KSGWDEYGIAYG PS+
Sbjct: 213 VTVQNVRILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPST 272
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
I I R+ G + SGIA+GSE SGGV V AE I Y+ I +KT+ GRGG++RNI V
Sbjct: 273 NIIIHRLVGRTQTSGIAIGSEMSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYV 332
Query: 214 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 273
S+V + N I G G+HPDD +NPNALPV+ ITIKDV G ++ +GLI+G++
Sbjct: 333 SNVTLANVDIAITFTGLYGEHPDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDN 392
Query: 274 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 328
F ICLSNI L + + P CS V G + V+P C L G CS+ +
Sbjct: 393 FVNICLSNIILNVTS---NYPWNCSYVKGYSDLVQPEACEPLKERIFPGHCSDCY 444
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/295 (55%), Positives = 205/295 (69%), Gaps = 3/295 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQG+IWWN + RTL +TRP+L+E MNS ++ISN+ F NSPFW IHPVYCS
Sbjct: 153 GNNGTIDGQGSIWWNRFMNRTLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQ 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V ++ V ILAP DSPNTDGIDPDSS NVCIED YISTGDDL+A+KSGWDEYGIAYG PS+
Sbjct: 213 VTVQNVRILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPST 272
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
I I R+ G + SGIA+GSE SGGV V AE I Y+ GI +KT+ GRGG++RNI V
Sbjct: 273 NIIIHRLVGKTQTSGIAIGSEMSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYV 332
Query: 214 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 273
S+V + N I G G+HPDD ++PNALPV+ +TIKDV G ++ +GLI+G++
Sbjct: 333 SNVSLANVDIAIWFTGSYGEHPDDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDN 392
Query: 274 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 328
F ICLSNI L + + P CS V G + V+P C L CS+ +
Sbjct: 393 FVNICLSNIILNVTS---NYPWNCSYVKGYSDLVQPEACEPLKERIFPDHCSDCY 444
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/302 (52%), Positives = 209/302 (69%), Gaps = 11/302 (3%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R L+D +I+ G+NGTIDGQG+IWWN +R TL +TRP+L+E MN+ ++ISN+
Sbjct: 137 RNLTDVIIT--------GDNGTIDGQGSIWWNWFRNETLDYTRPHLVELMNTTGVVISNL 188
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSPFW IHPVYCS V+++ VTILAP DSPNTDGIDPDSS +VCIED YISTGDD++A
Sbjct: 189 TFLNSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIA 248
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYG +Y PS ITIR + G + +GIA+GSE SGGV V AE++ YN GI
Sbjct: 249 IKSGWDEYGTSYARPSKNITIRGLVGQTTSAGIAIGSEMSGGVSEVHAENLTFYNSTTGI 308
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
+KT GRGG++RNI +S++ + + + I+ G GDHPD+ ++P ALP++ ITI DV
Sbjct: 309 RIKTAPGRGGYVRNIYISNMSLTDVKTAIRFTGQYGDHPDESYDPKALPLIERITIDDVT 368
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G V+ +GL++GL+ F ICLSNINL + P CS + G + V P C L
Sbjct: 369 GQNVKYAGLLEGLEGDTFLDICLSNINLSVTS---KSPWNCSYIQGYSEAVSPEICEPLR 425
Query: 317 SS 318
+
Sbjct: 426 ET 427
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 217/293 (74%), Gaps = 3/293 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG+IDGQG +WW +W RTL TR +L+E MNS +I+ISN+ F+NSPFW IHPVYCSN
Sbjct: 188 GNNGSIDGQGKMWWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSN 247
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV++ +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS
Sbjct: 248 VVVKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSS 307
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I +RRV+G++P SG+ +GSE SGG+ NV+ + +++++ G+ +KT+IGRGG+I NIT
Sbjct: 308 HIIVRRVSGTTPTCSGVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNIT 367
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+ ++ ME + I+ + DHPD++++PNA+PVV G++I +V ++ ++QG+K++
Sbjct: 368 LHNITMERVKIPIRFSRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDA 427
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 325
PF GIC+ N+ L G+A TS C VSG A +V P PC +L ++ + CS
Sbjct: 428 PFGGICMKNVTLVGLASSTS--WHCEFVSGFANEVFPMPCPQLQNNDSSSWCS 478
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 159/296 (53%), Positives = 208/296 (70%), Gaps = 4/296 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G G IDGQG+IWW+M+R +TL +TRP+L+E MNS ++ISN+ F NSPFW IHPVYCS
Sbjct: 153 GNEGIIDGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQ 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V ++ VTILAP DSPNTDGIDPDSS +VCIED YISTGDDL+A+KSGWDEYGIA+G PS+
Sbjct: 213 VTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPST 272
Query: 154 GITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I R+ G + S GIA+GSE SGGV +V AE I+ Y+ I +KT+ GRGG++RNI
Sbjct: 273 NIVIHRLVGKTHTSAGIAIGSEMSGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIY 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
V+++ + N I+ G GDHPDD ++PNALPV+ ITI+DV G + ++GLI+G++
Sbjct: 333 VTNMTLANVDIAIRFTGSYGDHPDDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 328
F ICLSNI L ++ P CS++ G + V P C L CS+ +
Sbjct: 393 NFVNICLSNITLN---VSSNYPWNCSNIRGYSDMVFPEACEPLKERIFPDHCSDCY 445
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/299 (51%), Positives = 213/299 (71%), Gaps = 11/299 (3%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R L+D +I+ G+NGTIDGQG+IWW+ +R +TL +TRP+L+EFMN+ ++ISN+
Sbjct: 144 RNLTDVIIT--------GDNGTIDGQGSIWWDWFRNQTLNYTRPHLVEFMNTTGVVISNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSPFW IHPVYCS V+++ VTILAP DSPNTDGIDPDSS +VC+ED Y+STGDD++A
Sbjct: 196 TFINSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDVCVEDCYVSTGDDIIA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWDEYG++YG PS ITIRR+ G + +GIA+GSE SGGV V AE++ YN GI
Sbjct: 256 IKSGWDEYGMSYGRPSKNITIRRLVGQTTSAGIAIGSEMSGGVSEVHAENLRFYNSTTGI 315
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
+KT+ GRGG++RNI +S++ + + + I G G+HPD+ ++P ALP++ IT++DV
Sbjct: 316 RIKTSPGRGGYVRNIYISNMSLTDVKTAISFTGRYGEHPDEYYDPTALPLIERITVEDVA 375
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G V+ +GL++G++ F ICL NINL + P CS + G + V P C L
Sbjct: 376 GQNVKYAGLLEGIEGDTFLDICLLNINLSVTS---KSPWNCSYIQGYSDTVSPEICEPL 431
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 155/283 (54%), Positives = 207/283 (73%), Gaps = 4/283 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G+NGTIDGQG+IWWN ++++TL +TRP+L+EF+NS ++ISNV F NSPFW IHPVYCS
Sbjct: 153 GDNGTIDGQGSIWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPVYCSQ 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V+I+ VTILAP DSPNTDGIDPDSS++VCIED YISTGDDL+A+KSGWDEYGI+Y PS+
Sbjct: 213 VIIQNVTILAPLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPST 272
Query: 154 GITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I IRR+ G + S GIA+GSE SGGV V AE + +N GI +KT+ GRGG++RNI
Sbjct: 273 NIIIRRLVGKTNSSAGIAIGSEMSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIY 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SD+ + + + I+ G G+HPD+ ++P ALP++ IT+KDV G ++ +GL++G++
Sbjct: 333 ISDMNLVDVKIAIRFTGQYGEHPDEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
F ICLSNI L + P CS + G + V P C L
Sbjct: 393 NFVNICLSNITLNVTS---ESPWNCSYIHGYSDLVSPEACEPL 432
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 158/302 (52%), Positives = 207/302 (68%), Gaps = 3/302 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDGQG+IWWN + +TL +TRP+L+E MNS ++ISNV F NSPFW I
Sbjct: 154 LTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMNSTGVLISNVTFLNSPFWTI 213
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCS+V I+ VTI+AP SPNTDGI+PDSS NVCIED YISTGDDL+++KSGWD YGI
Sbjct: 214 HPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCYISTGDDLISIKSGWDGYGI 273
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
++G PS+ I IRR+ G + +GIA+GSE SGGV V AE I +++ I +KT+ GRGG
Sbjct: 274 SFGRPSTNINIRRLIGKTTSAGIAIGSEMSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGG 333
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI 266
++RN+ +S++ + N I+ G G+HPDD ++P+ALPV+ ITIKDV G KV+ +GLI
Sbjct: 334 YVRNVYISNMILANVDIAIRFTGLYGEHPDDTYDPDALPVIERITIKDVIGVKVKHAGLI 393
Query: 267 QGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 326
QG+K F ICLSNI L + P CS + G + V P C L CS+
Sbjct: 394 QGIKGDNFVNICLSNITLN---VSSKLPWNCSYIKGFSDLVSPEACEPLKERIFPEHCSD 450
Query: 327 HF 328
+
Sbjct: 451 CY 452
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 213/312 (68%), Gaps = 11/312 (3%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R L+D +I+ G NGTIDGQG+IWWN + +TL +TRP+L+E MNS ++ISNV
Sbjct: 152 RNLTDVVIT--------GNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMNSTGVLISNV 203
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSPFW IHPVYCS+V I+ VTI+AP SPNTDGI+PDSS NVCIED YISTGDDL++
Sbjct: 204 TFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCYISTGDDLIS 263
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWD YGI++G PS+ I IRR+ G + +GIA+GSE SGGV V AE I +++ I
Sbjct: 264 IKSGWDGYGISFGRPSTNINIRRLIGKTTSAGIAIGSEMSGGVSEVHAEDIYIFDSHSAI 323
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
+KT+ GRGG++RN+ +S++ + N I+ G G+HPDD ++P+ALPV+ ITIKDV
Sbjct: 324 RIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEHPDDTYDPDALPVIERITIKDVI 383
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
G KV+++GLIQG+K F ICLSNI L P CS V G + V P C L
Sbjct: 384 GEKVKRAGLIQGIKGDNFVNICLSNITLN---VSKKLPWNCSYVKGYSDLVSPEACEPLR 440
Query: 317 SSQQTGACSNHF 328
CS+ +
Sbjct: 441 ERIFPEHCSDCY 452
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 150/290 (51%), Positives = 212/290 (73%), Gaps = 3/290 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDGQG +WW +W RTL TR +L+E MNS+ I+ISN+ F+NSPFW I
Sbjct: 104 LANVVITGNNGTIDGQGKMWWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTI 163
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HP+YCSN+V++ +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 164 HPIYCSNLVVKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGI 223
Query: 147 AYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
PSS I IRRV+G++P SG+ +GSE SGG+ NV E +++++ G+ +KT+ GRG
Sbjct: 224 KMARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRG 283
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I NIT+SD+ ME + I+ + DHPD++++P A+PVV G++I ++ ++ +
Sbjct: 284 GYIANITISDITMERVKIPIRFSSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPV 343
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
++G++++PF GIC+ NI+L GV +SP +C VSG A V P PC +L
Sbjct: 344 LEGIEDAPFGGICMKNISLLGVV--SSPSWRCEFVSGFANDVFPTPCPQL 391
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/302 (50%), Positives = 209/302 (69%), Gaps = 4/302 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S S + G NGTIDGQG IWWN + TL +TRP L+EFM S +++SN+
Sbjct: 137 RHQSLIFGSNLTDVIITGANGTIDGQGEIWWNWFHNHTLNYTRPPLVEFMYSTRVVVSNL 196
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSPFWNIHPVYCS V+++++TILAP SPNTDGIDPDSS+NVCIED YI GDD+V
Sbjct: 197 TFTNSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVV 256
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ +PSS I+I+ +TG + S GIA+GSE SGG+ NV A I + N G
Sbjct: 257 IKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSEMSGGISNVRAVGIRIVNSVHG 316
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++N+ ++DV M+N I+I + G+HPDDK++ NALP+++ ITIK+V
Sbjct: 317 IRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEHPDDKYDKNALPIISNITIKNV 376
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + +G++QG++ F+ ICLSN+ L + + P CS V G + V P C EL
Sbjct: 377 IGANIGVAGMLQGIQGDSFSNICLSNVTL---STKSMDPWNCSLVEGYSNSVSPEICEEL 433
Query: 316 SS 317
+
Sbjct: 434 RT 435
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/284 (53%), Positives = 203/284 (71%), Gaps = 3/284 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQG+IWW+ +R +TL TRP+L+E +NS ++ISN F NSPFW IHPVYCSN
Sbjct: 283 GNNGTIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSN 342
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V ++ VTI+ P SPNTDGIDPDSS NVCIED YISTGDDL+++KSGWDEYGI++G PS+
Sbjct: 343 VTVQNVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPST 402
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
I+I R+TG + +GIA+GSE SGGV V AE I +++ I +KT+ GRGG++RN+ +
Sbjct: 403 NISIHRLTGRTTSAGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYI 462
Query: 214 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 273
S++ + N I+ G G+HPDD ++ +ALPV+ IT+ +V G ++++GLIQG+K
Sbjct: 463 SNMTLINVDIAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDN 522
Query: 274 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
F ICLSNI L + P CSDV G + V P C +L+
Sbjct: 523 FVDICLSNITLN---VSKNNPWNCSDVKGYSELVSPESCEQLNE 563
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/287 (51%), Positives = 204/287 (71%), Gaps = 2/287 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGTIDGQG++WW+ +R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +
Sbjct: 153 GENGTIDGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRD 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV++ +TILAP +SPNTDG+DPDSS+NVCIED YI TGDDLV++KSGWDEYGI+Y PSS
Sbjct: 213 VVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSS 272
Query: 154 GITIRRVTG-SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I R+TG ++ SGIA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+
Sbjct: 273 KIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVH 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+ +V ++N +K I+ G G+HPD+KF+P ALP + IT ++V G + +GL++G+
Sbjct: 333 ILNVKLDNVKKAIRFTGKYGEHPDEKFDPKALPAIEKITFENVNGDGIGVAGLLEGIAGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PCSELSSS 318
F IC N+ L+ P +CS+V G + V P C L S
Sbjct: 393 EFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKES 439
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 213/293 (72%), Gaps = 3/293 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQG +WW +W RTL TR +L+E MNS +I+I+N+ F N+PFW IHPVYCSN
Sbjct: 145 GNNGTIDGQGKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSN 204
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV++ +TILAP +PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS
Sbjct: 205 VVVKDMTILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSS 264
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I +RRV+G++P SG+ +GSE SGG+ N+ E +++++ G+ +KT+ GRGG+I NIT
Sbjct: 265 NIVVRRVSGTTPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANIT 324
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+S+V ME + I+ + DHPD+ ++P A+PVV GI+I++V ++ +++G++++
Sbjct: 325 ISNVTMERVKVPIRFSRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDA 384
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 325
PF GIC+ N++L GV +S C VSG A +V P PC +L S+ + CS
Sbjct: 385 PFGGICMKNVSLLGVV--SSLSWHCEFVSGFADEVFPTPCPQLQSNISSSWCS 435
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/287 (51%), Positives = 204/287 (71%), Gaps = 2/287 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGTIDGQG +WW+ +R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +
Sbjct: 153 GENGTIDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRD 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV++ +TILAP +SPNTDG+DPDSS+NVCIED YI TGDDLV++KSGWDEYGI+Y PSS
Sbjct: 213 VVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSS 272
Query: 154 GITIRRVTG-SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I R+TG ++ SGIA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+
Sbjct: 273 KIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVH 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+ +V ++N +K I+ G G+HPD+K++P ALP + IT ++V G + +GL++G++
Sbjct: 333 ILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PCSELSSS 318
F IC N+ L+ P +CS+V G + V P C L S
Sbjct: 393 VFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKES 439
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/287 (51%), Positives = 204/287 (71%), Gaps = 2/287 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGTIDGQG +WW+ +R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +
Sbjct: 152 GENGTIDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRD 211
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV++ +TILAP +SPNTDG+DPDSS+NVCIED YI TGDDLV++KSGWDEYGI+Y PSS
Sbjct: 212 VVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSS 271
Query: 154 GITIRRVTG-SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I R+TG ++ SGIA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+
Sbjct: 272 KIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVH 331
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+ +V ++N +K I+ G G+HPD+K++P ALP + IT ++V G + +GL++G++
Sbjct: 332 ILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGD 391
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PCSELSSS 318
F IC N+ L+ P +CS+V G + V P C L S
Sbjct: 392 VFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKES 438
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/307 (50%), Positives = 210/307 (68%), Gaps = 4/307 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S S + G NGTIDGQGA+WW+ + TL +TRP L+E M S ++ISN+
Sbjct: 153 RHQSLIFGSNLTDVIITGSNGTIDGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNL 212
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSPFWNIHPVYCS V+ +++TILAP SPNTDGIDPDSS+NVCIED YI GDD+V
Sbjct: 213 TFINSPFWNIHPVYCSQVLAQHLTILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVV 272
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ HPSS I+IR +TG + S G+A GSE SGG+ +V AE I + N G
Sbjct: 273 IKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEMSGGISDVRAEGIRIVNSVHG 332
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++N+ V+DV +N I+I G+ G+HPDD++N +ALP ++ ITIKDV
Sbjct: 333 IRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDDRYNKSALPTISNITIKDV 392
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + +G++QG+ F+ ICLSN++L + ++ P CS V G + V P C +L
Sbjct: 393 VGVNIGVAGMLQGIPGDNFSNICLSNVSL---SVRSTDPWNCSLVEGYSNSVSPEVCEQL 449
Query: 316 SSSQQTG 322
+S G
Sbjct: 450 RTSPGPG 456
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 203/299 (67%), Gaps = 1/299 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDGQG +WW +WR RTL TR +LIE +NS +++IS+V NSPFW +
Sbjct: 192 LNDVVITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTV 251
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVV++ +TILAP D+PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 252 HPVYCSNVVMKDLTILAPLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGI 311
Query: 147 AYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
++G PS+ I I+RV+G++P SG+ GSE SGG+ NVL ++++N + +KT++GRG
Sbjct: 312 SFGKPSTNIVIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRG 371
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I NIT++ V ME + I+ + DHPDD+++P ALP ++ + + DV G +Q++ +
Sbjct: 372 GYITNITIASVAMEKVKVPIRFSRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPM 431
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 324
++ + + + GIC N + +G+ C V G A+ V P PC E + C
Sbjct: 432 LEAVPGAVYEGICFRNFSFRGIRRQQDSRWHCESVYGEAHDVFPAPCEEFRRDGSSSWC 490
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 209/307 (68%), Gaps = 4/307 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S S + G NGTIDGQG +WWN + TL +TRP L+E M S ++ISN+
Sbjct: 166 RHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNL 225
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F N+PFWNIHPVYCS V+++++TILAP SPNTDGIDPDSSSNVCIED YI GDD+V
Sbjct: 226 TFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVV 285
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ HPSS I+IR +TG + S GIA GSE SGG+ +V AE + N G
Sbjct: 286 IKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHG 345
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++NI ++DV M+N I+I G+ G+HPDD ++ NALPV++ ITIK+V
Sbjct: 346 IRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVISNITIKNV 405
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + +G++ G++ F+ ICLSN++L + ++ P CS + G + V P C +L
Sbjct: 406 VGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPWNCSLIEGFSNSVAPEICEQL 462
Query: 316 SSSQQTG 322
S G
Sbjct: 463 RPSPGPG 469
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 152/308 (49%), Positives = 212/308 (68%), Gaps = 4/308 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S S + G NGT+DGQGA+WW+ + TL +TRP L+E M S ++ISN+
Sbjct: 146 RHQSLIFGSNLTDVIITGANGTVDGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSPFWNIHPVYCS V+++++TILAP SPNTDGIDPDSS+NVCIED Y+ GDD++
Sbjct: 206 TFINSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIEDCYVRNGDDIIV 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ HPSS I+IR +TG + S G+A GSE SGG+ +V AE + + N G
Sbjct: 266 IKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEMSGGISDVRAEGVRIVNSVHG 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++N+ V+DV +N I+I G+ G+HPDD ++ NALP ++ ITIKDV
Sbjct: 326 IRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDDGYDRNALPTISNITIKDV 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + +G++QG+ F+GICLSN++L + ++ P CS V G + V P C +L
Sbjct: 386 VGVNIGVAGMLQGIPGDSFSGICLSNVSL---SVRSTDPWNCSLVEGYSSSVSPEVCEQL 442
Query: 316 SSSQQTGA 323
++ G+
Sbjct: 443 RATPGPGS 450
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 209/307 (68%), Gaps = 4/307 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S S + G NGTIDGQG +WWN + TL +TRP L+E M S ++ISN+
Sbjct: 106 RHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNL 165
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F N+PFWNIHPVYCS V+++++TILAP SPNTDGIDPDSSSNVCIED YI GDD+V
Sbjct: 166 TFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVV 225
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ HPSS I+IR +TG + S GIA GSE SGG+ +V AE + N G
Sbjct: 226 IKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHG 285
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++NI ++DV M+N I+I G+ G+HPDD ++ NALPV++ ITIK+V
Sbjct: 286 IRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVISNITIKNV 345
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + +G++ G++ F+ ICLSN++L + ++ P CS + G + V P C +L
Sbjct: 346 VGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPWNCSLIEGFSNSVAPEICEQL 402
Query: 316 SSSQQTG 322
S G
Sbjct: 403 RPSPGPG 409
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 313 bits (802), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 208/307 (67%), Gaps = 4/307 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S S + G NGTIDGQG +WWN + TL +TRP L+E M S ++ISN+
Sbjct: 166 RHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNL 225
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F N+PFWNIHPVYCS V+++++TILAP SPNTDGIDPDSSSNVCIED YI GDD+V
Sbjct: 226 TFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVV 285
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ HPSS I+IR +TG + S GIA GSE SGG+ +V AE + N G
Sbjct: 286 IKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHG 345
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++NI ++DV M+N I+I G+ G+HPDD ++ N LPV++ ITIK+V
Sbjct: 346 IRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNVLPVISNITIKNV 405
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + +G++ G++ F+ ICLSN++L + ++ P CS V G + V P C +L
Sbjct: 406 VGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPWNCSLVKGFSNSVAPEICEQL 462
Query: 316 SSSQQTG 322
S G
Sbjct: 463 RPSPGPG 469
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 159/313 (50%), Positives = 211/313 (67%), Gaps = 12/313 (3%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R L+D +I+ G+NGTIDGQG+IWW ++ +L +TRP+L+E MNS I+ISN+
Sbjct: 154 RNLTDVVIT--------GDNGTIDGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSPFW IHPVYCS V+++ VTI AP DSPNTDGIDPDSS +VCIED +ISTGDDL+A
Sbjct: 206 TFINSPFWTIHPVYCSKVIVQNVTIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI YG P ITIRR+ G + S GIA+GSE SGGV V AE+I YN G
Sbjct: 266 IKSGWDEYGILYGRPCRNITIRRLVGQTRSSAGIAIGSEMSGGVSEVHAENILFYNSNTG 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT+ GRGG++RNI VS+V + + I+ G+ G+HPD+ ++P ALP++ ITI+ V
Sbjct: 326 IRIKTSPGRGGYVRNIYVSNVTLNDVNIAIRFTGNYGEHPDEHYDPKALPIIERITIEHV 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G ++ +G++ G++ F ICLSNI+L + P CS + G + V P C L
Sbjct: 386 MGDNIKYAGILDGIEADSFVNICLSNISLNVTS---KFPWNCSYIQGYSESVSPEICEPL 442
Query: 316 SSSQQTGACSNHF 328
S SN +
Sbjct: 443 RESIPPDHYSNCY 455
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 206/309 (66%), Gaps = 3/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R +S E + GENGTIDGQGA WW + L TR +L+EF++S +IIISNV
Sbjct: 124 RHISLVHGENLEDVVITGENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNV 183
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSPFW +HPVYC+NV+I+ VTILAP DSPNTDGIDPDSSSNVCI+D YIS GDD++A
Sbjct: 184 TLVNSPFWTLHPVYCTNVLIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIA 243
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGIAYG PSS I IRRVTG + + IA+GSETSGG+ENVL E + + G
Sbjct: 244 IKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSG 303
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ ++T +GRG +IRN+ +S + + + + I I+G +HPD+ +N A PVV +T++ V
Sbjct: 304 VSIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSEHPDNGYNATAFPVVEKVTVRGV 363
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + + G I G+ PF ICL +I L G T+ KC+DV G + V P C EL
Sbjct: 364 TGNTLDRPGRILGIPEVPFRDICLEDIALDASTGLTA--WKCTDVEGYSSSVTPKICKEL 421
Query: 316 SSSQQTGAC 324
S + AC
Sbjct: 422 SENNSPDAC 430
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 209/303 (68%), Gaps = 3/303 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G+NGTIDGQG +WW +W RTL TR +L+E NS +I+ISN+ F NSPFW I
Sbjct: 180 LANVVITGQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTI 239
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVVI+ VTILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 240 HPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGI 299
Query: 147 AYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
A PSS I +RR++G++P SG+ +GSE SGG+ NV E +++++ G+ +KT+ GRG
Sbjct: 300 AMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRG 359
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G++ NIT++++ ME + I+ + DHPDD ++P A+P + GI I +V ++ L
Sbjct: 360 GYVVNITINNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPL 419
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 325
++G++ +P+ GIC+ N+ L G+A + C VSG V P C ++ S+ + C
Sbjct: 420 LEGIEGAPYEGICMKNVTLLGLA--PAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSSWCL 477
Query: 326 NHF 328
+H
Sbjct: 478 DHL 480
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/293 (48%), Positives = 210/293 (71%), Gaps = 3/293 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G+NGT+DGQG +WW +W RTL TR +L+E ++S +++ISN+ F+NSPFW IHPVYCSN
Sbjct: 185 GQNGTVDGQGRMWWELWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSN 244
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV++ +TILAP ++PNTDGIDPDSS+NVCIED+YI +GDDLVA+KSGWD YGI HPS+
Sbjct: 245 VVVKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPST 304
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I +RR++G++P SG+ +GSE SGG+ N+ E++++++ G+ +K++ GRGG+I N++
Sbjct: 305 NIIVRRISGTTPTCSGVGIGSEMSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVS 364
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SD+ ME + I+ + DHPDD ++P A+P I I +V ++ +++G++ S
Sbjct: 365 ISDIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGS 424
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 325
F G+C NI L GVA S +C VSG A +V P PC EL ++ + CS
Sbjct: 425 SFEGLCFKNITLHGVA--LSARWRCEYVSGFATEVFPVPCPELRNNSYSSWCS 475
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/308 (51%), Positives = 206/308 (66%), Gaps = 3/308 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R +S E + GENGTIDGQGA WW + L TR +L+EF++S +IIISNV
Sbjct: 124 RHISLVHGENLEDVVITGENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNV 183
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSPFW +HPVYC+NV+I+ VTILAP DSPNTDGIDPDSSSNVCI+D YIS GDD++A
Sbjct: 184 TLVNSPFWTLHPVYCTNVLIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIA 243
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGIAYG PSS I IRRVTG + + IA+GSETSGG+ENVL E + + G
Sbjct: 244 IKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSG 303
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I ++T +GRG +IRN+ +S + + + + I I+G +HPD+ FN A PVV +T++ V
Sbjct: 304 ISIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSEHPDNGFNATAFPVVEKVTVRGV 363
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + + G I G+ PF ICL +I L G T+ KC+DV G + V P CS+L
Sbjct: 364 TGNTLDRPGRILGIPEVPFRDICLEDIALDATTGLTA--WKCTDVEGYSSSVTPKICSQL 421
Query: 316 SSSQQTGA 323
S + A
Sbjct: 422 SENNTPDA 429
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 209/303 (68%), Gaps = 3/303 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G+NGTIDGQG +WW +W RTL TR +L+E NS +I+ISN+ F NSPFW I
Sbjct: 180 LANVVITGQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTI 239
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVVI+ VTILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 240 HPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGI 299
Query: 147 AYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
A PSS I +RR++G++P SG+ +GSE SGG+ NV E +++++ G+ +KT+ GRG
Sbjct: 300 AMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRG 359
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G++ NIT++++ ME + I+ + DHPDD ++P A+P + GI I +V ++ L
Sbjct: 360 GYVVNITINNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPL 419
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 325
++G++ +P+ GIC+ N+ L G+A + C VSG V P C ++ S+ + C
Sbjct: 420 LEGIEGAPYEGICMKNVTLLGLA--PAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSSWCL 477
Query: 326 NHF 328
+H
Sbjct: 478 DHL 480
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 199/277 (71%), Gaps = 1/277 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGTIDGQG++WW+ +R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +
Sbjct: 153 GENGTIDGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRD 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV++ +TILAP +SPNTDG+DPDSS+NVCIED YI T DDLV++K+GWDEYGI+Y PSS
Sbjct: 213 VVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSS 272
Query: 154 GITIRRVTG-SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I R+TG ++ SGIA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+
Sbjct: 273 KIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVH 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+ +V ++N +K I+ G G+HPD F+P ALP + IT ++V G + +GL++G++
Sbjct: 333 ILNVKLDNVKKAIRFTGKYGEHPDKNFDPKALPAIEKITFENVNGDGIGVAGLLEGIEGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 309
F IC N+ L+ P +CS+V G + V P
Sbjct: 393 EFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSP 429
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 207/300 (69%), Gaps = 3/300 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R +S + G NGTIDGQG +WW +W RTL TR +LIE +NS +++ISNV
Sbjct: 172 RHISLIHGQDLNDVVITGSNGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNV 231
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+NSPFW +HPVYC NVVI+ +TILAP ++PNTDGIDPDSSS VCIED YI +GDDLVA
Sbjct: 232 TLRNSPFWTVHPVYCRNVVIKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVA 291
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI+ G PSS I I+RV+G++P SG+ GSE SGG+ NVL ++++N
Sbjct: 292 VKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASA 351
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT++GRGG+I NIT+++V ME + I+ + DH DDK++ ALP+++GI I D+
Sbjct: 352 VRLKTDVGRGGYITNITIANVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDI 411
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G VQ++ +++ + + + GIC N++L+ + +C V G A++V P PC EL
Sbjct: 412 VGVDVQRAPMLEAVHGAVYEGICFRNVSLRAIRRQVR--WQCESVYGEAHEVFPAPCEEL 469
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 208/297 (70%), Gaps = 3/297 (1%)
Query: 30 ISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 89
+ F GENGTIDGQG +WW +W RTL TR +L+E +NS +I+ISN+ F+NSPFW IHPV
Sbjct: 36 VVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 95
Query: 90 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 149
YCSNVVI+ +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 96 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLA 155
Query: 150 HPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 208
PSS I IRRV+G++P SG+ +GSE SGG+ N+ E +N+++ GI +K++ GRGG+I
Sbjct: 156 RPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYI 215
Query: 209 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 268
N+++++ M + I+ + DHPD++F+P A+P V GI I ++ ++ ++ G
Sbjct: 216 ANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYG 275
Query: 269 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 325
+ + + G+C+ N+ + G+ S C+ VSG + V P PC +L ++ + CS
Sbjct: 276 IAGTSYDGVCMKNVTILGLT--PSAKWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCS 330
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 201/288 (69%), Gaps = 5/288 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQG++WW+ + +TL FTR +L+E ++SR I ISNV F+NSPFW IHPVYCS+
Sbjct: 172 GANGTIDGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSD 231
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V+I+ VTILAP +PN DGIDPDSSSNVCI D YISTGDDL+++KSGWDE+GI YG PS+
Sbjct: 232 VLIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPST 291
Query: 154 GITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ I V+G SP S GIA GSE SGG+ +V + + + N GI +KT GRGG+I NI+
Sbjct: 292 NVCIHNVSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNIS 351
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SD+ +EN G HPDD ++P ALPV+ GI+I+DV G ++ +G + GL+ +
Sbjct: 352 ISDLQLENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEA 411
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 320
PF +C +N++L AG CS+ G + +V P PC EL QQ
Sbjct: 412 PFRDLCFANVSLSVGAG----AWNCSNTYGFSERVVPSPCLELDRKQQ 455
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 207/296 (69%), Gaps = 3/296 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G+NGTIDGQG +WW +W RTL TR +L+E NS +I+ISN+ F NSPFW I
Sbjct: 169 LANVVITGQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTI 228
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVVI+ VTILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 229 HPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGI 288
Query: 147 AYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
A PSS I +RR++G++P SG+ +GSE SGG+ NV E +++++ G+ +KT+ GRG
Sbjct: 289 AMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRG 348
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G++ NIT++++ ME + I+ + DHPDD ++P A+P + GI I +V ++ L
Sbjct: 349 GYVVNITINNIRMERVKVPIRFSRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNSTKAPL 408
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 321
++G++ +P+ GIC+ N+ L G+A + C VSG V P C ++ S++ T
Sbjct: 409 LEGIEGAPYEGICMKNVTLLGLA--PAAKWHCEFVSGFTDAVFPVSCPQMQSNEAT 462
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/283 (52%), Positives = 200/283 (70%), Gaps = 3/283 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGTIDGQG +WW +W RTL TR +LIE NS +I+ISN+ NSPFW IHPVYCSN
Sbjct: 182 GENGTIDGQGKMWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSN 241
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VVIR +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YG+A PSS
Sbjct: 242 VVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSS 301
Query: 154 GITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I IRR++G++ SG+ +GSE SGG+ N+ E I++++ G+ +KT+ GRGG+I NIT
Sbjct: 302 NIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNIT 361
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
++V +E + I+ + DH DDK++P ALP V GI I +V +++ ++ G++ +
Sbjct: 362 FNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGT 421
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
F +CL N+ L G+ P + KC DVSG A V P C +L
Sbjct: 422 SFQDVCLRNVTLLGL--PKTEKWKCKDVSGYASDVFPLSCPQL 462
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/292 (49%), Positives = 207/292 (70%), Gaps = 4/292 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGT+DGQG +WW +W RTL TR +L+E MNS ++++SN+ F+NSPFW IHPVYCSN
Sbjct: 186 GENGTVDGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSN 245
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VVI+ +TILAP ++PNTDGIDPDSS+NVCIED+YI +GDDLVA+KSGWD+YGIA PS+
Sbjct: 246 VVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPST 305
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I + RV+G++P SG+ +GSE SGG+ N+ E+++++N G+ +K++ GRGG+I+N++
Sbjct: 306 NIIVSRVSGTTPTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVS 365
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+S++ ME + I+ + DHPDD ++P A+P I I +V ++ +++G+K S
Sbjct: 366 ISNIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGS 425
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 324
F G+C NI GVA S C V+G V P PC EL ++ T +C
Sbjct: 426 SFEGLCFKNITFLGVA--LSATWHCEYVAGFTNGVFPLPCPELQNN-GTSSC 474
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/281 (51%), Positives = 202/281 (71%), Gaps = 3/281 (1%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 95
NGTIDGQG +WW +W RTL TR +LIE +NS +++ISNV +NSPFW +HPVYC NVV
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 96 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 155
I+ +TILAP ++PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 156 TIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 214
I+RV+G++P SG+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT++
Sbjct: 126 IIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIA 185
Query: 215 DVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 274
+V ME + I+ + DH DDK++ ALP+++GI I D+ G VQ++ +++ + + +
Sbjct: 186 NVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVY 245
Query: 275 TGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
GIC N++L+ + +C V G A++V P PC EL
Sbjct: 246 EGICFRNVSLRAIRRQVR--WQCESVYGEAHEVFPAPCEEL 284
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 208/301 (69%), Gaps = 3/301 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ GENGTIDGQG +WW +W RTL TR +L+E +NS +I+ISN+ F+NSPFW I
Sbjct: 173 LSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTI 232
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVVI+ +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 233 HPVYCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGI 292
Query: 147 AYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
PSS I IRRV+G++P SG+ +GSE SGG+ N+ E +N+++ GI +K++ GRG
Sbjct: 293 NLARPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRG 352
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I N+++++ M + I+ + DHPD++F+P A+P V GI I ++ ++ +
Sbjct: 353 GYIANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPV 412
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 325
+ G+ + + G+C+ N+ + G+ S C+ VSG + V P PC +L ++ + CS
Sbjct: 413 LYGIAGTSYDGVCMKNVTILGLT--PSAKWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCS 470
Query: 326 N 326
+
Sbjct: 471 S 471
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 199/300 (66%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQGA+WW+ + Q+ L TRP LIEF+ S + ISN+
Sbjct: 125 RFSSLIFGTHLTDVVVTGNNGTIDGQGAVWWDKFHQKKLKLTRPYLIEFLYSDQVQISNL 184
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HP YCSNV+I+++TILAP DSPNTDGI+PDSSSNV IEDS++ +GDD +A
Sbjct: 185 TLINSPSWNVHPTYCSNVLIQWLTILAPVDSPNTDGINPDSSSNVRIEDSFVVSGDDCIA 244
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR T SP S IA+GSE SGG+++V AE I + G
Sbjct: 245 VKSGWDEYGIKFGRPTQHLVIRRFTCISPDSATIALGSEMSGGIQDVRAEDITALSTQSG 304
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++++I V + ++ + + G G HPD ++P ALP + GI+ KD+
Sbjct: 305 VRIKTAVGRGAYVKDIFVRRMTLKTMKYAFWMTGSYGSHPDTGYDPKALPEIKGISYKDI 364
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S ++G++N PFTGIC+SN+N+ P C+D+ G + +V P PC+ L
Sbjct: 365 VAENVTYSARLEGIENDPFTGICISNVNISLTQKPKELQWNCTDIQGVSSKVTPQPCAAL 424
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 204/294 (69%), Gaps = 5/294 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGTIDGQG +WW +W RTL TR +LIE N +I+ISN+ NSPFW IHPVYCSN
Sbjct: 182 GENGTIDGQGKMWWELWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSN 241
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VVIR +TILAP ++PNTDGIDPDSS+NVCIED YI +GDDL+AVKSGWD+YG+A PSS
Sbjct: 242 VVIRNMTILAPINAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSS 301
Query: 154 GITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I IRR++G++ SG+ +GSE SGG+ N+ E I++++ G+ +KT+ GRGG+I NIT
Sbjct: 302 NIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNIT 361
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
++V +E + I+ + DH DDK++P ALP V GI I +V +++ ++ G++ +
Sbjct: 362 FNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGT 421
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 326
F +CL N+ L G+ P + KC DVSG A V P C +L Q+ G+ S
Sbjct: 422 SFQDVCLRNVTLLGL--PQTEKWKCKDVSGYASDVFPLSCPQL--LQKKGSISQ 471
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 5/295 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQGA+WW+ + TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS
Sbjct: 153 GANGTIDGQGAVWWDWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQ 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V++ ++TILAP DSPNTDGI+PDSS+N+CI+ Y+ GDD++ +KSGWDEYGI++ HPSS
Sbjct: 213 VLVEHLTILAPLDSPNTDGINPDSSTNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSS 272
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I+I +TG + +GIA+GSE SGG+ V AE + + N GI +KT GRGG++RN+
Sbjct: 273 NISITNITGETRGGAGIAIGSEMSGGISEVRAERLRIVNSLHGIRIKTAPGRGGYVRNVY 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
++DV M N I+I G+ G+HPD+ ++ NALP+++ ITI++V G V +G+++G++
Sbjct: 333 IADVSMHNVSMAIRITGNYGEHPDNNYDRNALPMISNITIENVVGINVGIAGILEGIEGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGACSN 326
F+ IC+SN++L + + P CS + G + V P C +L + QT C N
Sbjct: 393 NFSSICISNVSL---SVQSMHPWNCSLIQGYSNSVIPESCDQLRTDCGQTPVCYN 444
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/286 (50%), Positives = 197/286 (68%), Gaps = 3/286 (1%)
Query: 43 GAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 102
G++WW +R +TL +TRP+L+E MNS ++ISN+ F NSPFW IHP+YCS+V+++ VTI
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 103 APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG 162
AP DSPNTDGIDPDSS +VCIED YISTGDD++A+KSGWDEYGI+YG PS I IRR+ G
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIG 120
Query: 163 SSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 222
+ SGIA+GSE SGGV +V AE I +N GI +KT+ GRGG++RNI +S+V + N +
Sbjct: 121 ETHSSGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANVK 180
Query: 223 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
I+ G G+HPD+ ++P A+P + IT KD+ G + +GL++G++ F ICL NI
Sbjct: 181 VAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYNI 240
Query: 283 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 328
L + + P CS+V G + V P C L S C+ +
Sbjct: 241 TL---SVNSISPWNCSNVQGFSSLVFPQTCELLEESIFPDHCTECY 283
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 149/283 (52%), Positives = 199/283 (70%), Gaps = 5/283 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQG++WW+ + +TL FTR +L+E ++SR I ISNV F+NSPFW IHPVYCS+
Sbjct: 115 GANGTIDGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSD 174
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V+I+ VTILAP +PN DGIDPDSSSNVCI D YISTGDDL+++KSGWDE+GI YG PS+
Sbjct: 175 VLIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPST 234
Query: 154 GITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ I V+G SP S GIA GSE SGG+ +V + + + N GI +KT GRGG+I NI+
Sbjct: 235 NVCIHNVSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNIS 294
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SD+ +EN G HPDD ++P ALPV+ GI+I+DV G ++ +G + GL+ +
Sbjct: 295 ISDLQLENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEA 354
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PF +C +N++L AG CS+ G + +V P PC EL
Sbjct: 355 PFRDLCFANVSLSVGAG----AWNCSNTYGFSERVVPSPCLEL 393
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 144/311 (46%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R +S + + G NGTIDGQG IWW++W RTL TR +LIE ++S +I+ISN+
Sbjct: 173 RHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNI 232
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+NSPFW +HPVYC NVVIR +T+LAP ++PNTDGIDPDSSS VCIED YI +GDDLVA
Sbjct: 233 TLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVA 292
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI+ G PSS I I+RV+G++P SG+ GSE SGG+ NV+ ++++N
Sbjct: 293 VKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQA 352
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT++GRGG+I NIT+ +V ME + I+ + DH DDK++ +ALP ++ + I+DV
Sbjct: 353 VRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDV 412
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G +Q++ +++ + + + GIC N++L + C V G A+ V P PC E
Sbjct: 413 VGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIK--RQDRWHCESVYGEAHDVLPAPCEEF 470
Query: 316 SSSQQTGACSN 326
+ + C +
Sbjct: 471 RRNGSSSWCGH 481
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 144/311 (46%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R +S + + G NGTIDGQG IWW++W RTL TR +LIE ++S +I+ISN+
Sbjct: 173 RHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNI 232
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+NSPFW +HPVYC NVVIR +T+LAP ++PNTDGIDPDSSS VCIED YI +GDDLVA
Sbjct: 233 TLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVA 292
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI+ G PSS I I+RV+G++P SG+ GSE SGG+ NV+ ++++N
Sbjct: 293 VKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQA 352
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT++GRGG+I NIT+ +V ME + I+ + DH DDK++ +ALP ++ + I+DV
Sbjct: 353 VRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDV 412
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G +Q++ +++ + + + GIC N++L + C V G A+ V P PC E
Sbjct: 413 VGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIK--RQDRWHCESVYGEAHDVLPAPCEEF 470
Query: 316 SSSQQTGACSN 326
+ + C +
Sbjct: 471 RRNGSSSWCGH 481
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/293 (49%), Positives = 209/293 (71%), Gaps = 5/293 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG+IDGQGAIWW +R TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS
Sbjct: 137 GANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQ 196
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V++++VTILAP +SPNTDG+ PDSS+NVCI Y+ GDD++ +KSGWDEYGI++ PSS
Sbjct: 197 VLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSS 256
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I+I +TG + +GIA GSE SGG+ V A + + N GI +KT GRGG+++N+
Sbjct: 257 NISISDITGETRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVY 316
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
++DV M+N I+I G+ G+HPDDK++ ALPV++ ITIKDV G + +G+++G++
Sbjct: 317 IADVSMDNVSMAIRITGNYGEHPDDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGD 376
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 324
F+ ICLSN++L + ++ P CS + G + V P C +L S+ +QT C
Sbjct: 377 NFSNICLSNVSL---SVQSAHPWNCSLIEGYSNSVIPESCEQLKSNCRQTPIC 426
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/311 (46%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R +S + + G NGTIDGQG IWW++W RTL TR +LIE ++S +I+ISN+
Sbjct: 173 RHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNI 232
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+NSPFW +HPVYC NVVIR +T+LAP ++PNTDGIDPDSSS VCIED YI +GDDLVA
Sbjct: 233 TLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVA 292
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI+ G PSS I I+RV+G++P SG+ GSE SGG+ NV+ ++++N
Sbjct: 293 VKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQA 352
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT++GRGG+I NIT+ +V ME + I+ + DH DDK++ +ALP ++ + I+DV
Sbjct: 353 VRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDV 412
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G +Q++ +++ + + + GIC N++L + C V G A+ V P PC E
Sbjct: 413 VGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIK--RQDRWHCESVYGEAHDVLPAPCEEF 470
Query: 316 SSSQQTGACSN 326
+ + C +
Sbjct: 471 RRNGSSSWCGH 481
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/290 (51%), Positives = 196/290 (67%), Gaps = 1/290 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G+NGTIDGQGAIWW + ++ L TR L+E M S+ IIISN+ F NSP WN+HPVY SN
Sbjct: 156 GDNGTIDGQGAIWWQKFHKKILKNTRGYLVELMYSKDIIISNLTFLNSPAWNLHPVYSSN 215
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
++I+YVTILAP DSPNTDGIDPDS S V IED Y+ +GDD+VA+KSGWDEYGI++G PS
Sbjct: 216 ILIQYVTILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQ 275
Query: 154 GITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I IRR+ G SP S IA+GSE SGG+++V AE I N GI +KT+ GRGGF+++I
Sbjct: 276 HIVIRRLVGISPTSAIIALGSEMSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVKDIF 335
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
V+ + M N + + G G HPD+K++PNALP V I+ ++ T V +G + G+ N+
Sbjct: 336 VNRMTMVNMKWAFTMTGSYGSHPDNKYDPNALPAVERISYSNIVATNVSVAGKLDGIANA 395
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 322
PF ICL+N+ + A P C+ + G + V P PCS L G
Sbjct: 396 PFKDICLTNVTITMAAKSKKYPWNCTYIHGLSNAVYPQPCSLLEERPAEG 445
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/293 (49%), Positives = 206/293 (70%), Gaps = 5/293 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG+IDGQGAIWW + TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS
Sbjct: 153 GANGSIDGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQ 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V++R+VTILAP +SPNTDG+ PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS
Sbjct: 213 VLVRHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSS 272
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I+I +TG + SGIA GSE SGG+ V A + + N GI +KT GRGG++ N+
Sbjct: 273 NISISDITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVY 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
++DV M+N I+I G+ G+HPDDK++ ALPV++ ITIKDV G + +G+++G++
Sbjct: 333 IADVSMDNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 324
F+ ICLSN++L + ++ P CS + G + V P C +L S+ +QT C
Sbjct: 393 NFSNICLSNVSL---SVQSAHPWNCSLIEGYSNSVIPESCEQLRSNCRQTSIC 442
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 213/310 (68%), Gaps = 5/310 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S + + G NGTIDGQGAIWW+ + TL +TRP+L+E M S ++ISN+
Sbjct: 136 RHQSLIFGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F+NSPFWNIHPVYCS V++++VTILAP +SPNTDGIDPDSS+NVCI+ Y+ GDD++
Sbjct: 196 TFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIV 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ PS+ I+I +TG + +GIA GSE SGG+ V AE + + N G
Sbjct: 256 IKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHG 315
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++N+ +SDV M+N I+I G+ G+HPDDK++ NALP+++ ITI++V
Sbjct: 316 IRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENV 375
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G V +G+++G++ F+ ICLSN++L + + P CS + G + V P C +L
Sbjct: 376 VGVNVGVAGILEGIEGDNFSSICLSNVSL---SVQSMHPWNCSLIEGYSNSVIPESCEQL 432
Query: 316 SSS-QQTGAC 324
+ QT C
Sbjct: 433 RTDCGQTPIC 442
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 213/310 (68%), Gaps = 5/310 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S + + G NGTIDGQGAIWW+ + TL +TRP+L+E M S ++ISN+
Sbjct: 120 RHQSLIFGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNL 179
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F+NSPFWNIHPVYCS V++++VTILAP +SPNTDGIDPDSS+NVCI+ Y+ GDD++
Sbjct: 180 TFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIV 239
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ PS+ I+I +TG + +GIA GSE SGG+ V AE + + N G
Sbjct: 240 IKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHG 299
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++N+ +SDV M+N I+I G+ G+HPDDK++ NALP+++ ITI++V
Sbjct: 300 IRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENV 359
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G V +G+++G++ F+ ICLSN++L + + P CS + G + V P C +L
Sbjct: 360 VGVNVGVAGILEGIEGDNFSSICLSNVSL---SVQSMHPWNCSLIEGYSNSVIPESCEQL 416
Query: 316 SSS-QQTGAC 324
+ QT C
Sbjct: 417 RTDCGQTPIC 426
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/293 (49%), Positives = 206/293 (70%), Gaps = 5/293 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG+IDGQGAIWW + TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS
Sbjct: 153 GANGSIDGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQ 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V++++VTILAP +SPNTDG+ PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS
Sbjct: 213 VLVQHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSS 272
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I+I +TG + SGIA GSE SGG+ V A + + N GI +KT GRGG++ N+
Sbjct: 273 NISISDITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVY 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
++DV M+N I+I G+ G+HPDDK++ ALPV++ ITIKDV G + +G+++G++
Sbjct: 333 IADVSMDNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 324
F+ ICLSN++L + ++ P CS + G + V P C +L S+ +QT C
Sbjct: 393 NFSNICLSNVSL---SVQSAHPWNCSLIEGYSNSVIPESCEQLRSNCRQTSIC 442
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 203/312 (65%), Gaps = 3/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G+NGT+DGQG +WW + + L +TRP LIE M S ++ ISN+
Sbjct: 136 RFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQLQYTRPYLIEIMYSDNVQISNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVYCSNV+++ +TILAP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 196 TLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI+YG P+ + IRR+T SP S IA+GSE SGG+E+V AE I N G
Sbjct: 256 VKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDILAINSESG 315
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++R+I V + M+ + + GD G H D+ ++PNA+PV+ I +D+
Sbjct: 316 VRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPNAIPVIENINYRDM 375
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ +PFTGIC+SN+ ++ P C+DVSG + V P PC L
Sbjct: 376 VAENVTMAARLEGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSGISSGVTPEPCELL 435
Query: 316 --SSSQQTGACS 325
+ ++ GACS
Sbjct: 436 PGQAEEKFGACS 447
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/193 (77%), Positives = 166/193 (86%), Gaps = 1/193 (0%)
Query: 111 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 170
DGIDPDSSS+VCIEDSYISTGDDLVAVKSGWD+YGI Y PS+ ITIRR+TGSSPF+GIA
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSPFAGIA 60
Query: 171 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 230
+GSETSGGV NVLAEHI L N+G+GIH+KTNIGRGG IRNITVSDVYM N RKGIKI+ D
Sbjct: 61 IGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISAD 120
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG-VAG 289
VGDHPD +NPNALPV+ + IK+VWG KVQQ+GLI GLKNSPFT ICLSNINLQG +
Sbjct: 121 VGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPIIS 180
Query: 290 PTSPPLKCSDVSG 302
+ P KCS VSG
Sbjct: 181 TRNVPWKCSYVSG 193
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/299 (47%), Positives = 202/299 (67%), Gaps = 3/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDGQG +WW +W RTL TR +LIE +NS +I+IS++ +NSPFW +
Sbjct: 198 LNDVVITGSNGTIDGQGNMWWELWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTV 257
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVV++ +TILAP ++PNTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI
Sbjct: 258 HPVYCSNVVMKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGI 317
Query: 147 AYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
+ G PS+ I I+RV+G++P SG+ GSE SGG+ NVL ++++N + +KT++GRG
Sbjct: 318 SLGKPSTNIVIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRG 377
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I NIT+S+V ME + I+ + DH DD ++ ALP ++ + I DV G +Q++ +
Sbjct: 378 GYITNITISNVTMEKVKVPIRFSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPM 437
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 324
++ + + + IC N +L+G+ C V G A++V P PC E + + C
Sbjct: 438 LEAVPGAVYEEICFRNFSLRGIRRQDR--WHCESVYGEAHEVFPAPCEEFRKNGSSSWC 494
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 201/300 (67%), Gaps = 10/300 (3%)
Query: 19 LSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIF 78
LSD +I+ G NGTIDGQG++WW + +L ++RP+++EF++S IIISN+ F
Sbjct: 165 LSDVVIT--------GNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTF 216
Query: 79 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 138
NSP WNIHPVYCSNV ++ +T AP +SP T G+ PDSS +CIEDS IS G D + +K
Sbjct: 217 LNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLK 276
Query: 139 SGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGIAYG P+ + IRRV SS SG+A GSE SGG+ ++L EHI+L + GI
Sbjct: 277 SGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIK 336
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KT GRGG+I+ I +SDV MEN I G HPDDK++P ALPVV+GIT KD+ G
Sbjct: 337 LKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVG 396
Query: 258 TKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
T V +G G+ SPFT ICL NI+L + +S P CS+V GS+ V P PC L +
Sbjct: 397 TNVSIAGNFSGIYESPFTSICLFNISLS-ITSNSSKPWLCSNVFGSSECVSPEPCPNLQT 455
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 196/294 (66%), Gaps = 3/294 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
E + G+NGTIDGQGA+WWN ++ +TL +TR +L+E ++S+ I+ISN+ F++SPFW I
Sbjct: 152 LEDVVITGDNGTIDGQGAVWWNAFQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTI 211
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYC NVV++ +T+LAP +SPNTDGIDPDSS VCIED YIS GDD +A+KSGWDEYG
Sbjct: 212 HPVYCRNVVVKDMTLLAPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGT 271
Query: 147 AYGHPSSGITIRR-VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
AYG PS I IRR V S +GIA GSE SGG+ +V +H+ ++ GI KT GRG
Sbjct: 272 AYGMPSQHIDIRRIVVHSETSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGPGRG 331
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+IRNITV +V M + I G+ G+HPD+ +N PV+ + I+++ G + +GL
Sbjct: 332 GYIRNITVDNVNMRSVNTAIAFTGNYGEHPDENWNRTDYPVIENVLIENIVGEDITHAGL 391
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 319
GL SPF I L+NI L S CS V+G+ + V P PC + + +
Sbjct: 392 FLGLPESPFLNIHLANIALD--TKSESEDWNCSSVAGTYFFVWPQPCPDFTKEE 443
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 205/311 (65%), Gaps = 12/311 (3%)
Query: 19 LSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIF 78
LSD +I+ G NGTIDGQG++WW + +L ++RP+++EF++S IIISN+ F
Sbjct: 230 LSDVVIT--------GNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTF 281
Query: 79 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 138
NSP WNIHPVYCSNV ++ +T AP +SP T G+ PDSS +CIEDS IS G D + +K
Sbjct: 282 LNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLK 341
Query: 139 SGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGIAYG P+ + IRRV SS SG+A GSE SGG+ ++L EHI+L + GI
Sbjct: 342 SGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIK 401
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KT GRGG+I+ I +SDV MEN I G HPDDK++P ALPVV+GIT KD+ G
Sbjct: 402 LKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVG 461
Query: 258 TKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-- 315
T V +G G+ SPFT ICL NI+L + +S P CS+V GS+ V P PC L
Sbjct: 462 TNVSIAGNFSGIYESPFTSICLFNISLS-ITSNSSKPWLCSNVFGSSECVSPEPCPNLQT 520
Query: 316 SSSQQTGACSN 326
+S CS+
Sbjct: 521 KTSNSFSTCSS 531
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 202/312 (64%), Gaps = 3/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G+NGTIDGQG +WW +R+ L +TRP LIE M S ++ ISN+
Sbjct: 136 RFSSLIFGTNLTDVIITGDNGTIDGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HP+Y SN+V++ +TILAP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 196 TLVNSPSWNVHPIYSSNLVVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGIAYG P+ + IRR+T SPFS IA+GSE SGG+++V AE I N G
Sbjct: 256 VKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESG 315
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + M+ + + G+ G H DD ++PNALPV+ I +D+
Sbjct: 316 VRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDM 375
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ PFTGIC+SN+ +Q P C+D++G + V P PC L
Sbjct: 376 VAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCGLL 435
Query: 316 --SSSQQTGACS 325
++ GAC+
Sbjct: 436 PDQGEEKIGACT 447
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 202/312 (64%), Gaps = 3/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G+NGT+DGQG +WW + + L +TRP LIE M S ++ ISN+
Sbjct: 136 RFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQLQYTRPYLIEIMYSDNVQISNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVYCSNV+++ +TILAP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 196 TLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI+YG P+ + IRR+T SP S IA+GSE SGG+E+V AE I N G
Sbjct: 256 VKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDILAINSESG 315
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++R+I V + M+ + + GD G H D+ ++PNA+PV+ I +D+
Sbjct: 316 VRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPNAIPVIENINYRDM 375
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + + G+ +PFTGIC+SN+ ++ P C+DVSG + V P PC L
Sbjct: 376 VAENVTMAARLGGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSGISSGVTPEPCELL 435
Query: 316 --SSSQQTGACS 325
+ ++ GACS
Sbjct: 436 PGQAEEKFGACS 447
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 201/312 (64%), Gaps = 3/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G+NGTIDGQG +WW + + L +TRP L+E M S ++ ISN+
Sbjct: 161 RFSSLIFGTNLTDVIITGDNGTIDGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNL 220
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HP+Y SNVV++ +TILAP SPNTDGI+PDS ++ IED YI +GDD VA
Sbjct: 221 TLVNSPSWNVHPIYSSNVVVQGITILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVA 280
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGIAYG P+ + IRR+T SPFS IA+GSE SGG++++ AE I N G
Sbjct: 281 VKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAAIALGSEMSGGIQDMRAEDIVAINTESG 340
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + M+ + + G+ G H DD ++PNALPV+ I +D+
Sbjct: 341 VRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDM 400
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ PFTGIC+SN+ +Q P C+D++G + V P PC L
Sbjct: 401 VAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCDLL 460
Query: 316 --SSSQQTGACS 325
++ GAC+
Sbjct: 461 PDQGEEKIGACT 472
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/280 (50%), Positives = 198/280 (70%), Gaps = 4/280 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG+IDGQGAIWW + TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS
Sbjct: 153 GANGSIDGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQ 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V++R+VTILAP +SPNTDG+ PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS
Sbjct: 213 VLVRHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSS 272
Query: 154 GITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I+I +TG + SGIA GSE SGG+ V A + + N GI +KT GRGG++ N+
Sbjct: 273 NISISDITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVY 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
++DV M+N I+I G+ G+HPDDK++ ALPV++ ITIKDV G + +G+++G++
Sbjct: 333 IADVSMDNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
F+ ICLSN++L + ++ P CS + G + V P C
Sbjct: 393 NFSNICLSNVSL---SVQSAHPWNCSLIEGYSNSVIPESC 429
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 203/287 (70%), Gaps = 2/287 (0%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E + G NGTIDGQG++WW+ +R ++L +TR +L+EF+NS++I++SN+ NSP W IH
Sbjct: 140 EDVVITGGNGTIDGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIH 199
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
PVYCSNVVIR VT++AP++SPNTDG+ PDS + VCIED I++G D V+VKSGWDEYGI
Sbjct: 200 PVYCSNVVIRGVTVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQ 259
Query: 148 YGHPSSGITIRRVTGSSPFSGIAV-GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
G PS+ + IRR+T +P S GSE SGG++NV+ E + ++N +G+HVKT GRGG
Sbjct: 260 VGLPSAKVVIRRITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGG 319
Query: 207 FIRNITVSDVYMENARKGIKIAGD-VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
+++NI+V++V M++ I ++G+ +HPD+ ++P A PVV GI + VWG + +G
Sbjct: 320 YVKNISVTNVTMDSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGS 379
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
++GL+ +PF ICLSNI L+ CS+V G++ V P PC
Sbjct: 380 LRGLEAAPFEDICLSNITLEVDEASQGSKWDCSNVKGASLGVTPTPC 426
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/288 (48%), Positives = 203/288 (70%), Gaps = 2/288 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
E + G NGTIDGQG++WW+ +R ++L +TR +L+EF+NS++I++SN+ NSP W I
Sbjct: 139 LEDVVITGGNGTIDGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTI 198
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNVVIR VT++AP++SPNTDG+ PDS + VCIED I++G D V+VKSGWDEYGI
Sbjct: 199 HPVYCSNVVIRGVTVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGI 258
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAV-GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
G PS+ + IRR+T +P S GSE SGG++NV+ E + ++N +G+HVKT GRG
Sbjct: 259 RVGLPSAKVVIRRITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRG 318
Query: 206 GFIRNITVSDVYMENARKGIKIAGD-VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
G+++NI+V++V M++ I ++G+ +HPD+ ++P A PVV GI + VWG + +G
Sbjct: 319 GYVKNISVTNVTMDSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAG 378
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
++GL+ +PF ICLSNI L+ CS+V G++ V P PC
Sbjct: 379 SLRGLEAAPFEDICLSNITLEVDDASQGSKWDCSNVKGASLGVTPTPC 426
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 206/311 (66%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R +S + + G NGTIDGQG +WW +W RTL TR +LIE +NS +++ISNV
Sbjct: 172 RHISLIHGENLDDVVITGSNGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVMISNV 231
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+NSPFW +HPVYC NVVI+ +TILAP ++PNTDGIDPDSSS+VCIED YI +GDDLVA
Sbjct: 232 TLRNSPFWTVHPVYCRNVVIKDLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVA 291
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWD+YGI+ PS+ I I+RV+G++P SG+ +GSE SGGV VL ++++N
Sbjct: 292 IKSGWDQYGISVNKPSTNIIIQRVSGTTPTCSGVGIGSEMSGGVSGVLIRDLHVWNSASA 351
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT++GRGGF+ N+TV++V ME + I+ + DH DDK++ ALP ++ + I D+
Sbjct: 352 VRIKTDVGRGGFVTNVTVANVTMERVKVPIRFSRGSDDHSDDKYDRTALPTISDVRIVDI 411
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL--KCSDVSGSAYQVKPWPCS 313
G VQ++ +++ + + + GIC N++L+ +C V G A+ V P C
Sbjct: 412 VGVDVQRAPILEAVHGAVYEGICFRNVSLRLREEVRRRHAGWQCESVYGEAHGVFPEACE 471
Query: 314 ELSSSQQTGAC 324
EL + + C
Sbjct: 472 ELRHNGSSSWC 482
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 193/311 (62%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + GENGTIDGQG WW + ++ L +TRP LIE M S +I ISN+
Sbjct: 148 RFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHRKKLKYTRPYLIELMFSDNIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++++ +TI AP SPNTDGI+PDS +NV IED YI +GDD VA
Sbjct: 208 TLLNSPSWNVHPVYSSNIIVQGITIFAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVA 267
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SP+S IA+GSE SGG+++V AE I G
Sbjct: 268 VKSGWDEYGIKFGWPTKQLMIRRLTCISPYSATIALGSEMSGGIQDVRAEDITAIQTESG 327
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + + + K+ GD H D ++PNALP + I +DV
Sbjct: 328 VRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHADSHYDPNALPEIKNINYRDV 387
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + QG+ N PFTGIC++N+ L+ A P C+D+ G V P PC L
Sbjct: 388 VAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPWTCTDIEGMTSGVTPPPCGLL 447
Query: 316 SSS--QQTGAC 324
++ AC
Sbjct: 448 PDQGPEKITAC 458
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 191/279 (68%), Gaps = 3/279 (1%)
Query: 35 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
+NGTIDGQGA+WW+ + +TL +TR +L+E ++S I+ISN+ F++SPFW IHPVYC NV
Sbjct: 117 DNGTIDGQGAVWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNV 176
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
V++ +TILAP DSPNTDGIDPDSS NVCIED YIS G D +A+KSGWDEYG +YG PS
Sbjct: 177 VVKDMTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKH 236
Query: 155 ITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
I +RR+T S S GIA GSE SGG+ +V +H+ ++ GI KT +GRGG+IRN+TV
Sbjct: 237 IDVRRITVHSKTSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTV 296
Query: 214 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 273
+V M + I G+ G+HPD+ +N PV+ I+I++V G + +GL GL SP
Sbjct: 297 DNVDMHSVGTAIAFTGNYGEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESP 356
Query: 274 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
F I L+NI L S CS V+G+ + V P PC
Sbjct: 357 FHNIHLANIALD--VKSESDDWNCSSVAGTYFFVWPQPC 393
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 193/311 (62%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + GENGTIDGQG WW + ++ L +TRP LIE M S +I ISN+
Sbjct: 148 RFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHRKKLKYTRPYLIELMFSDNIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++++ +TI AP SPNTDGI+PDS +NV IED YI +GDD VA
Sbjct: 208 TLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVA 267
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SP+S IA+GSE SGG+++V AE I G
Sbjct: 268 VKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDITAIQTESG 327
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + + + K+ GD H D ++PNALP + I +DV
Sbjct: 328 VRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHADGHYDPNALPEIKNINYRDV 387
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + QG+ N PFTGIC++N+ L+ A P C+D+ G V P PC L
Sbjct: 388 VAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPWTCTDIEGMTSGVTPPPCGLL 447
Query: 316 SSS--QQTGAC 324
++ AC
Sbjct: 448 PDQGPEKITAC 458
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/300 (46%), Positives = 196/300 (65%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + GENGTIDGQGA+WW + + L +TRP LIE M+S ++ IS++
Sbjct: 146 RYISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SNV+I+ +TI AP SPNTDGI+PDS +N IED YI +GDD +A
Sbjct: 206 TLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGIAYG P+ + IRR+T SPFS IA+GSE SGG+E+V AE I + G
Sbjct: 266 VKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESG 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + M+ + + G+ G H D+ ++PNALP + GI +D+
Sbjct: 326 VRIKTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDM 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V +G ++G+ PFTGIC+SN+ + P C+D++G V P PC L
Sbjct: 386 VAENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLL 445
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 203/310 (65%), Gaps = 4/310 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S S + G NGTIDGQGA+WW+ + + L +TR LIE M+S +I ISN+
Sbjct: 174 RFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNL 233
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVY SN+V++ +TILAP +SPNTDGI+PDS S+V IED YI +GDD VA
Sbjct: 234 TLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVA 293
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI+YG PS I IRR+T SP S IA+GSE SGG+++V AE I N
Sbjct: 294 IKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESA 353
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++R++ + + ++ + GD HPDDK++PNA+PVV I+ +DV
Sbjct: 354 VRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDV 413
Query: 256 WGTKV-QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 314
T V +++ +QG++ +PF GIC++N+ ++ P C+D+ G + V P PC
Sbjct: 414 VATGVYKEAARLQGIQGAPFRGICVANVTAD-LSKSRKYPWNCADIEGVSANVSPAPCDP 472
Query: 315 LSSSQQTGAC 324
L + GAC
Sbjct: 473 LQGAHD-GAC 481
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 196/299 (65%), Gaps = 6/299 (2%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
E ++ GENGTIDGQG +WW +R +TL ++R +++E + S+ I+I N+ FQNSP W I
Sbjct: 126 LEDVTITGENGTIDGQGGVWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTI 185
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYC NVVI+ +T+L P DSPNTDGIDPDSS +VCIED YIS GDD +++KSGWD+YGI
Sbjct: 186 HPVYCKNVVIKNLTVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGI 245
Query: 147 AYGHPSSGITIRRVTGSSP----FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 202
+YG PS I IRR+ +S +G++ GSE SGG+ NV + + LY G+ KT+
Sbjct: 246 SYGMPSKHIQIRRIVSASKTFGIHAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSP 305
Query: 203 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ 262
GRGG+I+++ V ++ + + + + + G HPDD +N A PV+ I IK++ G + Q
Sbjct: 306 GRGGYIKHVAVHNLLLHSVKTAVAFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQ 365
Query: 263 SGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 321
+G++QGL SPF I L I L T CS VSGS + V P PC++L+ T
Sbjct: 366 AGILQGLPESPFRHIHLKTIALD--VRSTKNVWNCSWVSGSYFFVVPQPCADLTRQNIT 422
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 203/310 (65%), Gaps = 4/310 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S S + G NGTIDGQGA+WW+ + + L +TR LIE M+S +I ISN+
Sbjct: 154 RFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNL 213
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVY SN+V++ +TILAP +SPNTDGI+PDS S+V IED YI +GDD VA
Sbjct: 214 TLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVA 273
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI+YG PS I IRR+T SP S IA+GSE SGG+++V AE I N
Sbjct: 274 IKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESA 333
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++R++ + + ++ + GD HPDDK++PNA+PVV I+ +DV
Sbjct: 334 VRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDV 393
Query: 256 WGTKV-QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 314
T V +++ +QG++ +PF GIC++N+ ++ P C+D+ G + V P PC
Sbjct: 394 VATGVYKEAARLQGIQGAPFRGICVANVTAD-LSKSRKYPWNCADIEGVSANVSPAPCDP 452
Query: 315 LSSSQQTGAC 324
L + GAC
Sbjct: 453 LQGAHD-GAC 461
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/291 (48%), Positives = 198/291 (68%), Gaps = 10/291 (3%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G+NGTI+GQG++WW+ + +L ++RP+L+EF+ S ++++SN+ F N+P +NI
Sbjct: 144 LRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNI 203
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNV ++ +++ AP +SP T GI PDSS + CIED I+ G D +A+KSGWDEYGI
Sbjct: 204 HPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGI 263
Query: 147 AYGHPSSGITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
AYG P++ + IRRV SS S +A GSE SGG+ NV E ++LYN GI +T GRG
Sbjct: 264 AYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRG 323
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I+ I +SDV MEN G +G HPDD F+PNALPV++ IT+++V GT + +G
Sbjct: 324 GYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGS 383
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLK----CSDVSGSAYQVKPWPC 312
G++ SPFT ICLSNI+L T+PP CS+VSG + V P PC
Sbjct: 384 FTGIQESPFTSICLSNISLS-----TTPPASISWVCSNVSGFSQWVFPEPC 429
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 203/310 (65%), Gaps = 4/310 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S S + G NGTIDGQGA+WW+ + + L +TR LIE M+S +I ISN+
Sbjct: 107 RFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNL 166
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVY SN+V++ +TILAP +SPNTDGI+PDS S+V IED YI +GDD VA
Sbjct: 167 TLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVA 226
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI+YG PS I IRR+T SP S IA+GSE SGG+++V AE I N
Sbjct: 227 IKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESA 286
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++R++ + + ++ + GD HPDDK++PNA+PVV I+ +DV
Sbjct: 287 VRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDV 346
Query: 256 WGTKV-QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 314
T V +++ +QG++ +PF GIC++N+ ++ P C+D+ G + V P PC
Sbjct: 347 VATGVYKEAARLQGIQGAPFRGICVANVTAD-LSKSRKYPWNCADIEGVSANVSPAPCDP 405
Query: 315 LSSSQQTGAC 324
L + GAC
Sbjct: 406 LQGAHD-GAC 414
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/291 (48%), Positives = 198/291 (68%), Gaps = 10/291 (3%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G+NGTI+GQG++WW+ + +L ++RP+L+EF+ S ++++SN+ F N+P +NI
Sbjct: 142 LRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNI 201
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNV ++ +++ AP +SP T GI PDSS + CIED I+ G D +A+KSGWDEYGI
Sbjct: 202 HPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGI 261
Query: 147 AYGHPSSGITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
AYG P++ + IRRV SS S +A GSE SGG+ NV E ++LYN GI +T GRG
Sbjct: 262 AYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRG 321
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I+ I +SDV MEN G +G HPDD F+PNALPV++ IT+++V GT + +G
Sbjct: 322 GYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGS 381
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLK----CSDVSGSAYQVKPWPC 312
G++ SPFT ICLSNI+L T+PP CS+VSG + V P PC
Sbjct: 382 FTGIQESPFTSICLSNISLS-----TTPPASISWVCSNVSGFSQWVFPEPC 427
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 145/314 (46%), Positives = 197/314 (62%), Gaps = 3/314 (0%)
Query: 14 AIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIII 73
A R+ S + + G+NGTIDGQG +WW + L +TRP LIE M S I I
Sbjct: 153 AAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQI 212
Query: 74 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 133
SN+ NSP WN+HPVY N++I+ +TILAP SPNTDGI+PDS +N IED YI +GDD
Sbjct: 213 SNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDD 272
Query: 134 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNV 192
VAVKSGWDEYGIAYG P+ + IRR+T SP+S IA+GSE SGG+++V AE I N
Sbjct: 273 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINS 332
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITI 252
GI +KT IGRGG++++I V + M+ + + G+ G H D+ ++P A PV+ GI
Sbjct: 333 ESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINY 392
Query: 253 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
+D+ V + ++G+ + PFTGIC+SN+ + A P C+DV G + V P PC
Sbjct: 393 RDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPC 452
Query: 313 SELSSS--QQTGAC 324
S L ++T C
Sbjct: 453 STLPDQGPEKTSLC 466
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/314 (46%), Positives = 197/314 (62%), Gaps = 3/314 (0%)
Query: 14 AIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIII 73
A R+ S + + G+NGTIDGQG +WW + L +TRP LIE M S I I
Sbjct: 141 AAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQI 200
Query: 74 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 133
SN+ NSP WN+HPVY N++I+ +TILAP SPNTDGI+PDS +N IED YI +GDD
Sbjct: 201 SNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDD 260
Query: 134 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNV 192
VAVKSGWDEYGIAYG P+ + IRR+T SP+S IA+GSE SGG+++V AE I N
Sbjct: 261 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINS 320
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITI 252
GI +KT IGRGG++++I V + M+ + + G+ G H D+ ++P A PV+ GI
Sbjct: 321 ESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINY 380
Query: 253 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
+D+ V + ++G+ + PFTGIC+SN+ + A P C+DV G + V P PC
Sbjct: 381 RDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPC 440
Query: 313 SELSSS--QQTGAC 324
S L ++T C
Sbjct: 441 STLPDQGPEKTSLC 454
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 197/311 (63%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G+NGTIDGQGA WW ++++ L +TRP LIE M S I ISN+
Sbjct: 148 RYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQKFQKKKLKYTRPYLIELMFSDKIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++I+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 208 TLLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 267
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SP S IA+GSE SGG+++V AE I + G
Sbjct: 268 VKSGWDEYGIKFGWPTKQLVIRRLTCISPESAAIALGSEMSGGIQDVRAEDITAIHTESG 327
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + M + + G+ G H D ++PNALP +NGI +DV
Sbjct: 328 VRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADSHYDPNALPEINGINYRDV 387
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ N PFTGIC++N+ + A P C+D+ G V P PC+ L
Sbjct: 388 VADNVTIAARLEGISNDPFTGICIANVTINMAAKAKKQPWACTDIEGITSGVTPKPCNSL 447
Query: 316 SSS--QQTGAC 324
++ AC
Sbjct: 448 PDQGPEKIKAC 458
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 205/310 (66%), Gaps = 4/310 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S S + G NGTIDGQGA+WW+ + + L +TR LIE M+S +I ISN+
Sbjct: 156 RFASLVGGSNLTDVVITGNNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNL 215
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVY SN+V++ +TILAP +SPNTDGI+PDS S+V IED YI +GDD VA
Sbjct: 216 TLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVA 275
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI+YG PS I IRR+T SP S IA+GSE SGG+++V AE I N G
Sbjct: 276 IKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINSESG 335
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG +++++ V + + + + G+ HPDDK++PNA+PVV+ I+ +DV
Sbjct: 336 VRIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGNYKSHPDDKYDPNAIPVVDNISYQDV 395
Query: 256 WGTKV-QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 314
T V +++ ++G++ +PF GIC++N+ ++ P C+DV G + V P PC
Sbjct: 396 VATGVYKEAARLEGIQGAPFKGICVANVTAD-LSKSRKYPWTCADVEGVSVNVSPAPCQP 454
Query: 315 LSSSQQTGAC 324
L + GAC
Sbjct: 455 LQGAHD-GAC 463
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG+ WW+ ++++ L TRP +IE M S I ISN+
Sbjct: 157 RFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNL 216
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HPVY SN++I +TILAP D PNTDGIDPDSS+NV IED+YI +GDD +A
Sbjct: 217 TLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIA 276
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI G PS I +RR+T SP S +A+GSE SGG+++V E + N
Sbjct: 277 IKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESA 336
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +K+ +GRG F+++I V + + + + G GDHPD+ F+PNALP ++GI +DV
Sbjct: 337 VRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDV 396
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V +G ++G+ N PFTGIC+SN+ ++ A P C+D+SG V P PC L
Sbjct: 397 TAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELL 456
Query: 316 SSSQ 319
+
Sbjct: 457 KEKE 460
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/292 (49%), Positives = 202/292 (69%), Gaps = 2/292 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G++G IDGQG +WWN + +L ++RP+L+EF +S+ +++SN+ F N+P +NI
Sbjct: 145 LQDVVITGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNI 204
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNV + +++ AP++SP T GI PDSS +VCIE I+TG D +A+KSGWD+YGI
Sbjct: 205 HPVYCSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGI 264
Query: 147 AYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
AYG PS I IRRV SS S IA GSE SGG+ NVL EH+ L N +GI ++T GRG
Sbjct: 265 AYGRPSKNIHIRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRG 324
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I+ I VSDV MEN +G G HPDD+++PNALP+V IT+++V GT ++ +G
Sbjct: 325 GYIKGIVVSDVEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGN 384
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
G++ SPFT I LSNI + ++ + CSDVSG + V P PCS+LS+
Sbjct: 385 FSGIQESPFTSIYLSNITFSINSSSSTSWI-CSDVSGFSESVIPPPCSDLST 435
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/292 (49%), Positives = 202/292 (69%), Gaps = 2/292 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G++G IDGQG +WWN + +L ++RP+L+EF +S+ +++SN+ F N+P +NI
Sbjct: 140 LQDVVITGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNI 199
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNV + +++ AP++SP T GI PDSS +VCIE I+TG D +A+KSGWD+YGI
Sbjct: 200 HPVYCSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGI 259
Query: 147 AYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
AYG PS I IRRV SS S IA GSE SGG+ NVL EH+ L N +GI ++T GRG
Sbjct: 260 AYGRPSKNIHIRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRG 319
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I+ I VSDV MEN +G G HPDD+++PNALP+V IT+++V GT ++ +G
Sbjct: 320 GYIKGIVVSDVEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGN 379
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
G++ SPFT I LSNI + ++ + CSDVSG + V P PCS+LS+
Sbjct: 380 FSGIQESPFTSIYLSNITFSINSSSSTSWI-CSDVSGFSESVIPPPCSDLST 430
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 199/300 (66%), Gaps = 3/300 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G NGTIDG G+ WW + +L ++RP+L+E + S +++SN+ F N+P +NI
Sbjct: 143 LQDVVITGNNGTIDGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNI 202
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYC NV I ++I AP +SP T GI PDSS +VCIED I+TG D +A+KSGWDEYGI
Sbjct: 203 HPVYCRNVHIHNISIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGI 262
Query: 147 AYGHPSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
AYG P+ + IRRV + + S +A GS+ SGG+ NV EH++LYN GI +T GRG
Sbjct: 263 AYGRPTENVHIRRVHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRG 322
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G++++I +SD+ M+N + I G G HPDDKF+PNALP+++ +D+ GT + +G
Sbjct: 323 GYMKDIILSDIEMKNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGS 382
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS-SQQTGAC 324
GL+ SPFT ICLSNI L V +S +CS+VSG + V P PC +L S S + +C
Sbjct: 383 FAGLQESPFTNICLSNITLS-VNYASSTSWECSNVSGFSDSVLPIPCPDLDSPSNYSSSC 441
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 143/292 (48%), Positives = 196/292 (67%), Gaps = 2/292 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NG IDG G WW ++ +L ++RP+LIE + S +++SN+ F N+P ++I
Sbjct: 142 LHDVVITGNNGNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSI 201
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNV I V+I AP +SPNT GI PDSS +VCIED I+TG D +++KSGWDEYGI
Sbjct: 202 HPVYCSNVHIHNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGI 261
Query: 147 AYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
AYG P+ + IRRV +S S IA GS+ SGG+ N+L E+++LYN GI +T GRG
Sbjct: 262 AYGRPTENVHIRRVHLQASSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRG 321
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+++ I +SD+ MEN I G G HPDDKF+PNALP+++ I ++D+ GT + +G
Sbjct: 322 GYMKEIIISDIEMENIYTAIAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGS 381
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
GL+ SPFT ICLSNI L +S P +CS+VSG + V P PC +L +
Sbjct: 382 FAGLQESPFTNICLSNITLS-TNSVSSIPWECSNVSGFSDYVLPKPCPDLET 432
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 198/312 (63%), Gaps = 3/312 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG +WW +R L TRP LIE M S +I ISN+
Sbjct: 23 RFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGELNHTRPYLIEIMFSTNIQISNL 82
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVYCSNVV++ +TILAP SPNTDGI+PDS +N I+D YI +GDD VA
Sbjct: 83 TLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQDCYIVSGDDCVA 142
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGIA+G P+ + IRR+T SP S IA+GSE SGG+E+V AE I + G
Sbjct: 143 VKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESG 202
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + ++ + + G+ G HPD+ ++PNA+PV+ I +DV
Sbjct: 203 VRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDV 262
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ PFTGIC+SN+ + CSDV+G +V P PC L
Sbjct: 263 VAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDVAGITSEVTPKPCDLL 322
Query: 316 SSS--QQTGACS 325
S + GAC+
Sbjct: 323 SDQGPGKIGACN 334
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 201/305 (65%), Gaps = 2/305 (0%)
Query: 15 IFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIIS 74
I R+ S + G+NGTIDGQG+IWW ++ +L +TRPNLIEF++S +IIS
Sbjct: 194 IGRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWKLFNSNSLNYTRPNLIEFVDSVDVIIS 253
Query: 75 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 134
N+ F +SP W IHPVYCSNV I+ +T APA+ P T GI PDSS NVCIE+S ISTG D
Sbjct: 254 NLTFLDSPAWGIHPVYCSNVQIQNITYRAPAEFPYTSGIVPDSSQNVCIENSNISTGHDA 313
Query: 135 VAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 193
+ +KSGWD+YGIAYG P+S + I V SS +G+A GSE SGG+ ++AE +++ N
Sbjct: 314 IVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGAGLAFGSEMSGGISVIIAEKLHILNSP 373
Query: 194 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIK 253
+GI +KT GRGG++R I +SD +EN GI + G G HPDDK++ ++LPVV IT K
Sbjct: 374 IGIELKTTRGRGGYMRGIFISDAELENISLGISMTGYSGFHPDDKYDTSSLPVVGDITFK 433
Query: 254 DVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCS 313
+V G + +G G+ SPF+ ICLSN+ + P SP CS+V G + V P PC
Sbjct: 434 NVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEP-SPSWFCSNVIGFSEHVIPEPCP 492
Query: 314 ELSSS 318
++ SS
Sbjct: 493 DIQSS 497
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/311 (46%), Positives = 197/311 (63%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQG +WW +R L TRP LIE M S +I ISN+
Sbjct: 137 RYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNHTRPYLIEIMFSTNIQISNL 196
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVYCSNVV++ +TILAP SPNTDGI+PDS +N I+D YI +GDD VA
Sbjct: 197 TLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQDCYIVSGDDCVA 256
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGIA+G P+ + IRR+T SP S IA+GSE SGG+E+V AE I + G
Sbjct: 257 VKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESG 316
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + ++ + + G+ G HPD+ ++PNA+PV+ I +DV
Sbjct: 317 VRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDV 376
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ PFTGIC+SN+ + CSDV+G +V P PC L
Sbjct: 377 VAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDVAGITSEVTPKPCDLL 436
Query: 316 SSS--QQTGAC 324
S + GAC
Sbjct: 437 SDQGPGKIGAC 447
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 196/286 (68%), Gaps = 3/286 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G+NGTIDGQG++WW+ + +L ++RP+L+EF +S +++SN+ F N+P ++IHPVYCSN
Sbjct: 151 GDNGTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSN 210
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV++ +++ AP +SP T GI PDSS+NVCIEDS I G D +++KSGWDEYGIAY P++
Sbjct: 211 VVVQNISVSAPGESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTT 270
Query: 154 GITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ IRRV SS S +A GSE SGG+ NV E +++YN GI +T GRGG+I+ I
Sbjct: 271 DVYIRRVYLQSSSGSSVAFGSEMSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRII 330
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV ++N GD G HPDD F+PNA+PV++ IT++ V G+ + +G GL S
Sbjct: 331 ISDVELKNTNTAFGAIGDCGSHPDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAES 390
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 318
PFT +CL N++L T P CS+V G + V P PC EL SS
Sbjct: 391 PFTSLCLFNVSL--AIRNTLSPWTCSNVVGFSESVSPEPCPELESS 434
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 189/304 (62%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S F + + G NGTIDGQG+ WW + L +TRP LIE M S +I ISN+
Sbjct: 138 RFASLFFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNL 197
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F +SP WNIHPVY SN++++ VTI+AP SPNTDGI+PDS +N IED YI +GDD +A
Sbjct: 198 TFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIA 257
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI++G P+ + IRR+T SP+S IA+GSE SGG+E+V AE I Y G
Sbjct: 258 VKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESG 317
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG F++NI V + + + + G+ H D ++P+ALP + GI +D+
Sbjct: 318 VRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDI 377
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V +G ++G+ PFTGIC+SN + A CSDV G V P PC L
Sbjct: 378 VAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLL 437
Query: 316 SSSQ 319
+
Sbjct: 438 DGQE 441
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 201/297 (67%), Gaps = 3/297 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + E + G+N TIDGQGA+WW+ +R++TL +TR +++E + S++I+ISN+
Sbjct: 98 RFSSLINGNGLEDVIITGDNATIDGQGAVWWSAFRKKTLNYTRGHMLELIESKNILISNL 157
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F+NSPFW IHPVYC NVV++ +TIL P D+PNTDGIDPDSS +VCIED YIS GDD ++
Sbjct: 158 TFKNSPFWTIHPVYCKNVVVKSLTILNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAIS 217
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTG-SSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWD++G ++ PS I ++R+ S +GI+ GSE SGG+ +V + + + G
Sbjct: 218 IKSGWDQFGTSFAMPSKHIKVQRILAFSRSSAGISFGSEMSGGISDVKVDGMVVTGARWG 277
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++R I+V ++ + + R I + G+ G+HPD+ +N A P++ I +K++
Sbjct: 278 VRIKTAVGRGGYVRGISVKNIVLHSIRTAIAVMGNYGEHPDENWNRTAYPLIEDIRMKNI 337
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
G + Q+GL GL+ SPF I L+NI LQ T CSDV+GS V P PC
Sbjct: 338 VGENINQAGLFLGLQESPFRDIHLANIALQ--VNTTKQIWNCSDVAGSYIFVFPQPC 392
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/286 (49%), Positives = 197/286 (68%), Gaps = 3/286 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G+NGTIDGQG++WW+ + +L ++RP+L+EF +S +++SN+ F N+P +NIHPVYCSN
Sbjct: 149 GDNGTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSN 208
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V+++ +++ AP +SP T GI PDSS+NVCIEDS I G D +++KSGWDEYGIAY P+
Sbjct: 209 VLVQNISVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQ 268
Query: 154 GITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ IRRV SS S IA GSE SGG+ NV E + LYN GI +T GRGG+I+ I
Sbjct: 269 DVHIRRVYLQSSSGSSIAFGSEMSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRII 328
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+S+V ++N GD G HPDD F+PNA+P+++ IT+++V G+ + +G GL S
Sbjct: 329 ISNVELKNINMAFGAIGDCGSHPDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAES 388
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 318
PFT ICL N++L A TS CS+V G + V P PC EL+SS
Sbjct: 389 PFTSICLFNVSLTIPA--TSTSWTCSNVIGFSEFVSPEPCPELNSS 432
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 197/313 (62%), Gaps = 1/313 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQG +WW + + +TRP LIE M S +I ISN+
Sbjct: 146 RYSSLIFGTNLTDVVITGANGTIDGQGDLWWKKFHNGEINYTRPYLIEIMYSNNIQISNL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHP Y SNVV++ +TILAP +SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 206 TLMNSPSWNIHPTYSSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI++G P+ + IRR+T SP S IA+GSE SGG+++V AE I N G
Sbjct: 266 VKSGWDEYGISFGMPTKQLVIRRLTCISPTSAAIALGSEMSGGIQDVRAEDITCINTESG 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT++GRGG++++I V + M + + G+ G HPD+ ++PNA+PV+ I +D+
Sbjct: 326 VRIKTSVGRGGYVKDIYVRKMTMHTMKWVFWMTGNYGSHPDNNYDPNAIPVIENINYRDI 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ PFTGIC+SN+ + P C+D++G + V P PCS L
Sbjct: 386 VAENVTMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQWNCTDIAGISSGVTPKPCSLL 445
Query: 316 SSSQQTGACSNHF 328
++ +F
Sbjct: 446 PEQEKEKIADCNF 458
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/296 (47%), Positives = 194/296 (65%), Gaps = 3/296 (1%)
Query: 23 LISKFE--KISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQN 80
LIS + + G NG IDGQG +WW R L +RPNL+EF+ S I+ISN+ F N
Sbjct: 141 LISGYNLTDVVITGNNGVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLN 200
Query: 81 SPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 140
SP W+IHPVYCSNV + VTI D+P TDGI PDS SN+CIEDS IS + +++KSG
Sbjct: 201 SPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSG 260
Query: 141 WDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVK 199
WD YGI++G P+S I I RV SS + +A GSE SGG+ ++ H+ +++ GI K
Sbjct: 261 WDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFK 320
Query: 200 TNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTK 259
T+ GRGG+I ++ +S+V MEN GI+ G+ HPDD F+P+ LP ++ +T+K++ GT
Sbjct: 321 TSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTN 380
Query: 260 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
+ +G++ G++ +PFT ICLSN+N AG CSDVSG + V P PC+EL
Sbjct: 381 ISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTEL 436
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G+NGTIDGQG+ WW+ + ++ L TRP +IE M S I ISN+
Sbjct: 148 RFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HP+Y SN++I +TILAP DSPNTDGI+PDS +NV IED++I +GDD +A
Sbjct: 208 TLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIA 267
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI G PS I IRR+T SP S +A+GSE SGG+++V E + N
Sbjct: 268 IKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESA 327
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +K+ +GRG F+++I V + + + + G GDHPD+ F+PNALP ++GI +DV
Sbjct: 328 IRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDV 387
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V +G ++G+ N PFTGIC+SN+ ++ A P C+D+SG V P PC L
Sbjct: 388 TAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELL 447
Query: 316 SSSQ 319
+
Sbjct: 448 QEKE 451
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/311 (45%), Positives = 194/311 (62%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQGA WW + ++ L +TRP LIE M S I ISN+
Sbjct: 148 RYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKKLKYTRPYLIELMFSDQIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++I+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 208 TLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 267
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SP S IA+GSE SGG+++V AE I + G
Sbjct: 268 VKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAAIALGSEMSGGIQDVRAEDITAIHTESG 327
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + M + + G+ G H D ++P ALP +NGI +DV
Sbjct: 328 VRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADSHYDPKALPEINGINYRDV 387
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ N PFTGIC++N+ + A P C+D+ G V P PC+ L
Sbjct: 388 VADNVTMAARLEGISNDPFTGICIANVTIGMAAKAKKQPWTCTDIEGITSGVTPKPCNSL 447
Query: 316 SSS--QQTGAC 324
++ AC
Sbjct: 448 PDQGPEKIKAC 458
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 211/312 (67%), Gaps = 5/312 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S S + G NGTIDGQGA WW+ + TL +TRP+L+E M S S++ISN+
Sbjct: 136 RHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F+NSPFWNIHPVYCS V++ +VTILAP DSPNTDGI+PDSS+NVCI Y+ GDD++
Sbjct: 196 TFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIV 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ SS I+I +TG + +GIA+GSE SGG+ V AE + + N G
Sbjct: 256 IKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGISEVRAEGLRIVNSLHG 315
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG++RN+ ++DV M N I+I G+ G+HPD K++ NALP+++ ITI++V
Sbjct: 316 IRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYDKNALPIISNITIENV 375
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G V +G+++G++ F+ IC+SN++L + + P CS + G + V P C +L
Sbjct: 376 VGIDVGVAGILEGIEGDNFSSICISNVSL---SVRSRYPWNCSRIQGYSNSVTPESCEQL 432
Query: 316 SSS-QQTGACSN 326
+ ++T C N
Sbjct: 433 KTDCEETPICYN 444
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/302 (48%), Positives = 198/302 (65%), Gaps = 6/302 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDG G +WW+ + +L +RP+L+EF+ S +++SN+ F N+P ++I
Sbjct: 140 LHDVVVTGNNGTIDGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSI 199
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCS+V I+ V+I P +SP T GI PDSS NVCIED ++ G D +++KSGWDEYGI
Sbjct: 200 HPVYCSHVHIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGI 259
Query: 147 AYGHPSSGITIRRVTGSSPFSG--IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
AYG P+ + IRRV + FSG +A GS+ SGG+ NVL EH +L+N GI +T GR
Sbjct: 260 AYGRPTENVHIRRVQLHA-FSGSALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGR 318
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+++ I +SD+ MEN I G+ G HPDDKF+PNALP ++ IT+KDV GT + +G
Sbjct: 319 GGYMKEIVMSDIQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVIGTNITIAG 378
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSP-PLKCSDVSGSAYQVKPWPCSELSSSQQTGA 323
+ G+ SPFT ICLSNI L SP CS+VSG + V P PC EL ++ +
Sbjct: 379 NLAGIDESPFTNICLSNITLS--TNSVSPITWACSNVSGFSDSVLPEPCPELGNTSYDSS 436
Query: 324 CS 325
S
Sbjct: 437 SS 438
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 145/302 (48%), Positives = 202/302 (66%), Gaps = 6/302 (1%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
K + G+NGTIDGQG++WW+ + +L ++RP+L+EF+ S I++SN+ F N+P +N
Sbjct: 141 KLRDVVITGDNGTIDGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYN 200
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHPVYCSNV+++ +++ AP +SP T GI PDSS+NVCIE+S I G D +++KSGWDEYG
Sbjct: 201 IHPVYCSNVLVQNMSLSAPPESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYG 260
Query: 146 IAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAY + + IRRV SS S IA GSE SGG+ NV E ++LYN GI +T GR
Sbjct: 261 IAYDRATRDVHIRRVHLQSSSGSSIAFGSEMSGGISNVHVEQVHLYNSFSGIGFRTTKGR 320
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+I+ I +SDV +EN + GD G HPDDKF+P A+PVV+ IT++++ GT + +G
Sbjct: 321 GGYIKRIFISDVELENINLALGAIGDHGLHPDDKFDPKAVPVVDQITLQNLTGTNISTAG 380
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS--SQQTG 322
G+++SPFT +CL NI L +S CS+V G + V P PC EL S S +
Sbjct: 381 NFTGIQDSPFTSLCLFNITLM---VSSSNSWTCSNVIGYSDSVFPVPCPELKSPYSNSSS 437
Query: 323 AC 324
AC
Sbjct: 438 AC 439
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 190/305 (62%), Gaps = 1/305 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NG IDGQGA WWN + Q L TRP LIE M S I IS +
Sbjct: 141 RFSSLIFGTHLTDVVITGNNGLIDGQGAYWWNKFHQGQLTLTRPYLIEIMYSDQIQISFL 200
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HPVY SN++I+ +TI AP DSPNTDGI+PDS SN+ IED I++GDD +A
Sbjct: 201 TLVNSPTWFVHPVYSSNIIIKGLTIKAPVDSPNTDGINPDSCSNIRIEDCNITSGDDCIA 260
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SP S IA+GSE SGG+ +V AE + N
Sbjct: 261 VKSGWDEYGIRFGMPTQHLIIRRITCVSPDSAMIALGSEMSGGIYDVRAEDLTAINTEAA 320
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT IGRGG+++NI V + + + I G GDHPD ++P ALP + GI +DV
Sbjct: 321 VRIKTAIGRGGYVKNIFVKGMNLNTMKYVFWITGTYGDHPDPGYDPKALPYITGINYRDV 380
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
T V +S ++G+ N PFTGIC+SN+++Q CS++SG V P+PC+ L
Sbjct: 381 VATNVTKSARLEGISNDPFTGICISNVSIQVSEQQKKLQWNCSNISGVTSNVTPYPCALL 440
Query: 316 SSSQQ 320
Q
Sbjct: 441 PEKGQ 445
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 210/312 (67%), Gaps = 5/312 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S S + G NGTIDGQGA WW+ + TL +TRP+L+E M S S++ISN+
Sbjct: 136 RHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F+NSPFWNIHPVYCS V++ +VTILAP DSPNTDGI+PDSS+NVCI Y+ GDD++
Sbjct: 196 TFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIV 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI++ SS I+I +TG + +GIA+GSE SGG+ V AE + + N G
Sbjct: 256 IKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGISEVRAEGLRIVNSLHG 315
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG++RN+ ++DV M N I+I G+ G+HPD K++ NALP+++ ITI++V
Sbjct: 316 IRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYDKNALPIISNITIENV 375
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G V +G+++G++ F+ IC+SN++L P P CS + G + V P C +L
Sbjct: 376 VGIDVGVAGILEGIEGDNFSSICISNVSLS--VRPRY-PWNCSRIQGYSNSVTPESCEQL 432
Query: 316 SSS-QQTGACSN 326
+ ++T C N
Sbjct: 433 KTDCEETPICYN 444
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 146/307 (47%), Positives = 193/307 (62%), Gaps = 4/307 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG+ WW+ + + L TRP +IE + S I ISN+
Sbjct: 143 RFSSLIFGTHLTDVIITGNNGTIDGQGSYWWDKFHNKQLKITRPYMIEILYSDQIQISNL 202
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HP Y SN++I+ +TILAP DSPNTDGIDPDSS+NV IED+YI +GDD +A
Sbjct: 203 TLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNYIVSGDDCIA 262
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWD+YGI +G PS I IRR+T SP S IA+GSE SGG+ENV E + N
Sbjct: 263 IKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSEMSGGIENVRVEDVTAINTESA 322
Query: 196 IHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
+ +K+ +GRGG++++I V V + R + G GDHPD+ F+P ALP + GI +D
Sbjct: 323 VRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGDHPDNGFDPKALPKITGIIFRD 382
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSN--INLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
V V +G ++G+ N PFTGIC+SN I L + P C+DVSG V P PC
Sbjct: 383 VIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKKKLPWNCTDVSGVTSNVVPKPC 442
Query: 313 SELSSSQ 319
LS +
Sbjct: 443 DLLSEKK 449
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/292 (49%), Positives = 195/292 (66%), Gaps = 6/292 (2%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDG G +WW+ + +L +RP+L+E + S +++SN+ F N+P ++I
Sbjct: 267 LHDVVVTGNNGTIDGMGMVWWDWYSTHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSI 326
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCS+V I+ V+I P +SP T GI PDSS NVCIED ++ G D +++KSGWDEYGI
Sbjct: 327 HPVYCSHVHIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGI 386
Query: 147 AYGHPSSGITIRRVTGSSPFSG--IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
AYG P+ + IRRV + FSG +A GS+ SGG+ NVL EH +L+N GI +T GR
Sbjct: 387 AYGRPTENVHIRRVHLHA-FSGSALAFGSDMSGGISNVLVEHAHLFNSKSGIEFRTTKGR 445
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+++ I +SD+ MEN I G+ G HPDDKF+PNALP ++ IT+KDV GT + +G
Sbjct: 446 GGYMKEIVMSDIQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVTGTNISIAG 505
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSP-PLKCSDVSGSAYQVKPWPCSEL 315
I G++ SPFT ICLSNI L SP +CS+VSG + V P PC EL
Sbjct: 506 NIAGIEESPFTNICLSNITLS--TNSVSPITWECSNVSGFSDSVLPEPCPEL 555
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 140/300 (46%), Positives = 194/300 (64%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQG +WW +R L +TRP LIE M S +I ISN+
Sbjct: 146 RYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNYTRPYLIEIMFSTNIQISNL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVYCSNVV++ +TILAP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 206 TLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI++G P+ + IRR+T SP S IA+GSE SGG+E+V AE I + G
Sbjct: 266 VKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESG 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + ++ + + G+ G HPD+ ++PNA+PV+ I +DV
Sbjct: 326 VRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDV 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ PFTGIC+SN+ + C+DV+G +V P PC+ L
Sbjct: 386 VAENVTMAAKLEGIAGDPFTGICISNVTIGLAQNSKKLQWNCTDVAGITSEVNPKPCALL 445
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 144/310 (46%), Positives = 202/310 (65%), Gaps = 4/310 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S S + G NGTIDGQGA+WW+ + L +TR LIE M+S +++ISNV
Sbjct: 153 RYASLIGGSNLTDVVITGANGTIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNV 212
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVY SN+V++ VTILAP SPNTDGI+PDS S+V IED YI +GDD VA
Sbjct: 213 TLVNSPAWNIHPVYSSNIVVQGVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVA 272
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGIAYG PS I +RR+T SP S IA+GSE SGG+ +V AE I N
Sbjct: 273 IKSGWDEYGIAYGMPSQHIVVRRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESA 332
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++R++ V + ++ + + G+ HPDD ++PNA+PVV+ I+ +DV
Sbjct: 333 VRIKTAVGRGAYVRDVFVRGMSLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDV 392
Query: 256 WGTKV-QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 314
T V +++ ++G++ +PF GIC++N+ ++ P C+D+ G + V P PC
Sbjct: 393 VATGVYKEAARLEGIQGAPFRGICIANVTAT-LSKSRKYPWTCTDIEGVSTGVTPAPCQP 451
Query: 315 LSSSQQTGAC 324
L + GAC
Sbjct: 452 LQGAHD-GAC 460
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 188/304 (61%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG+ WW + L +TRP LIE M S +I ISN+
Sbjct: 138 RFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNL 197
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F +SP WNIHPVY SN++++ VTI+AP SPNTDGI+PDS +N IED YI +GDD +A
Sbjct: 198 TFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIA 257
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI++G P+ + IRR+T SP+S IA+GSE SGG+E+V AE I Y G
Sbjct: 258 VKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESG 317
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG F++NI V + + + + G+ H D ++P+ALP + GI +D+
Sbjct: 318 VRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDI 377
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V +G ++G+ PFTGIC+SN + A CSDV G V P PC L
Sbjct: 378 VAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLL 437
Query: 316 SSSQ 319
+
Sbjct: 438 DGQE 441
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 188/300 (62%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + + G NGTIDGQGA WWN + + L TRP LIE + S I ISN+
Sbjct: 146 RFSSLIFGTNLKDVVITGNNGTIDGQGATWWNKFHKGLLNQTRPYLIELLYSHKIQISNL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
I NSP WN+HP Y SNV+I+ +TILAP DSPNTDGI+PDS +N IED YI +GDD +A
Sbjct: 206 ILINSPSWNVHPTYSSNVLIQGLTILAPVDSPNTDGINPDSCTNTRIEDCYIVSGDDCIA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI +G P+ + IRR+T SP S IA+GSE SGG+++V AE I N G
Sbjct: 266 VKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSEMSGGIQDVRAEDITAINTQSG 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRG ++++I V + + + + G G HPD ++PNALP++ I +D+
Sbjct: 326 IRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSHPDKGYDPNALPIITRINYRDI 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S ++G++ PFTGIC+SN N+ P C+D+ G V P PCS L
Sbjct: 386 VAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQWNCTDIEGVTSNVNPRPCSLL 445
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/293 (47%), Positives = 197/293 (67%), Gaps = 4/293 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NG IDG G WW ++ +L ++RP+LIE + S +++SN+ F N+P ++I
Sbjct: 153 LHDVVITGNNGIIDGMGLGWWELFSSHSLNYSRPHLIELVASNRVVVSNLTFLNAPAYSI 212
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNV I V+I AP +SP T GI PDSS +VCIED I+TG D +++KSGWDEYGI
Sbjct: 213 HPVYCSNVHIHNVSISAPQESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGI 272
Query: 147 AYGHPSSGITIRRVTGSSPFSG--IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
AYG P+ + IRRV + +SG IA GS+ SGG+ N+L E+++LYN GI +T GR
Sbjct: 273 AYGRPTENVHIRRVHLQA-YSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGR 331
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+++ I +SD+ MEN + G G HPDDKF+PNALP+++ I ++D+ GT + +G
Sbjct: 332 GGYMKEIIISDIEMENIYTAMAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAG 391
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
GL+ SPFT ICLSN+ L + +S P +CS+VSG + V P PC +L +
Sbjct: 392 SFAGLQESPFTNICLSNVTLS-INSVSSIPWECSNVSGFSDSVLPKPCPDLET 443
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 192/301 (63%), Gaps = 9/301 (2%)
Query: 19 LSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIF 78
L+D +IS G NGTI+GQG +WW+ + + L +TR L+E + SR IIISNV F
Sbjct: 63 LTDVIIS--------GNNGTINGQGQVWWDKFHAKELDYTRGYLLELLYSRDIIISNVTF 114
Query: 79 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 138
++P WN+HP YC+NV I VTILAP SPNTDGIDPDSSS+V IED YI +GDD +AVK
Sbjct: 115 VDAPSWNLHPTYCTNVTISGVTILAPVHSPNTDGIDPDSSSHVKIEDCYIVSGDDCIAVK 174
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGI + PS I +RR+T SP S IA+GSE SGG+++V E N +
Sbjct: 175 SGWDEYGIRFNMPSQHIVVRRLTCISPTSAMIALGSEMSGGIQDVRVEDNIAINTESAVR 234
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+K+ +GRGGF+R++ V + + + + G+ G HPD+ +P ALP V GI +DV+
Sbjct: 235 IKSGVGRGGFVRDVFVRRLSLHTMKWVFWMTGNYGQHPDNSSDPKALPEVTGINYRDVFA 294
Query: 258 TKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
V +G ++G+ N P+TGIC+SN+ Q C+DV G AY V P PC EL +
Sbjct: 295 ENVTMAGRMEGIPNDPYTGICMSNVTAQLAPKAKKLQWNCTDVQGVAYGVSPEPCPELGA 354
Query: 318 S 318
Sbjct: 355 E 355
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 199/302 (65%), Gaps = 2/302 (0%)
Query: 15 IFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIIS 74
I R+ S + G+NGTIDGQG+IWW ++ +L ++RPNLIEF++S IIIS
Sbjct: 149 IGRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWELFSSNSLNYSRPNLIEFVDSVDIIIS 208
Query: 75 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 134
N+ F +SP W IHPV+CSNV I+ +T APA+ P T GI PDSS VCIE+S ISTG D
Sbjct: 209 NLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFPYTSGIVPDSSRYVCIENSNISTGHDA 268
Query: 135 VAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 193
V +KSGWD+YGIAYG P+S + I V SS +G+A GSE SGG+ +++AE +++ N
Sbjct: 269 VVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEMSGGISDIIAEKLHILNSP 328
Query: 194 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIK 253
+GI +KT GRGG++R I +SD +EN GI + G G HPDDK++ +ALP+V IT K
Sbjct: 329 IGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFHPDDKYDTSALPIVGDITFK 388
Query: 254 DVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCS 313
+V G + +G G+ SPF+ ICLSN+ + P SP CS+V G + V P PC
Sbjct: 389 NVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEP-SPSWFCSNVIGFSEDVIPEPCP 447
Query: 314 EL 315
+L
Sbjct: 448 DL 449
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 5/296 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQG+ WWN +R L ++RP+L+EF++S I+ISN+ F NSP W+IHPVYCSN
Sbjct: 151 GNNGTIDGQGSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSN 210
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV+ VTI D+P GI PDS SN+CIEDS IS D +++KSGWD+ GIA+G P+S
Sbjct: 211 VVVHSVTIQTSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTS 270
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I R+ S + +A GSE SGG+ ++ A+ + +++ G+ KT GRGG+IR+
Sbjct: 271 DIHISRLDLQSSLGAALAFGSEMSGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTV 330
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV ME+ I GD HPDD+F+P ALPVV+ IT+K++ GT++ +G++ G+
Sbjct: 331 ISDVQMEDVDVAIAFTGDWPSHPDDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGD 390
Query: 273 PFTGICLSNIN--LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGACS 325
PFT ICLSNIN L A PTS CS+VSG + V P PC +L + S CS
Sbjct: 391 PFTDICLSNINFSLADSASPTS-HWSCSNVSGYSELVFPEPCLDLQTQSSDASVCS 445
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/303 (49%), Positives = 212/303 (69%), Gaps = 2/303 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQG+IWW + +L +TRP+L+EF++SR+++ISN+
Sbjct: 161 RYRSLISGNNLTDVVITGNNGTIDGQGSIWWEKFNSHSLNYTRPHLVEFVSSRNVVISNL 220
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
N+P WNI P YCSNVVI+ +T+ P DSP T+GI PDSS +VCIE+S IS G D +
Sbjct: 221 TLLNAPGWNIRPAYCSNVVIQNLTVYTPQDSPFTNGIVPDSSEHVCIENSNISMGYDAIV 280
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI+YG P+S + IRRV S+ +G+A+GSE SGG+ +VL E +L++ G
Sbjct: 281 LKSGWDEYGISYGKPTSNVHIRRVRLQSAAGAGVALGSEMSGGISDVLVELSSLHDSLFG 340
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGGFI++I +S+V M+N + GIK G HPD+K++P++LP V+GIT +D+
Sbjct: 341 IELKTARGRGGFIKDILISNVVMDNLQVGIKATGYSDMHPDEKYDPSSLPTVSGITFEDI 400
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
GT + +G GL SPFT ICLSNI++ + P++P L CS++SGS+ V P PC EL
Sbjct: 401 VGTNISIAGNFTGLSESPFTSICLSNISISISSDPSTPWL-CSNISGSSKNVSPEPCPEL 459
Query: 316 SSS 318
S
Sbjct: 460 QGS 462
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/297 (46%), Positives = 193/297 (64%), Gaps = 2/297 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
E + G NGTIDGQGA+WW+ +R +TL TR +L+E + ++ I+ISN+ FQNSPFW I
Sbjct: 188 LEDVIITGNNGTIDGQGAVWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTI 247
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVY NVV++ VTIL P +SPNTDGIDPDSS VCIED YIS GDD +++KSGWD+YG
Sbjct: 248 HPVYSKNVVVKRVTILNPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGT 307
Query: 147 AYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
+G PS I I+RV S S GI+ GSE SGG+ ++ + + + N G+ KT++GRG
Sbjct: 308 GFGMPSKYIRIQRVVAFSHTSAGISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRG 367
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
+IRN+TV+++ M R I + G+ G+HPD+ +N A PV+ I + ++ G + Q+GL
Sbjct: 368 AYIRNVTVNNIVMHTVRTAIAVMGNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGL 427
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 322
+ GL ++PF I L+ + L P CS V+G V P PC EL+ G
Sbjct: 428 LLGLPDAPFHDIHLTKVVLD-TRTTKQGPWNCSWVTGFYNFVLPKPCPELTMENSNG 483
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 187/294 (63%), Gaps = 1/294 (0%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
S + G+NGTI+GQG +WW+ + + L +TR L+E + S IIISNV F ++P W
Sbjct: 145 SNLTDVIITGQNGTINGQGQVWWDKYHAKELTYTRGYLLELLYSHDIIISNVTFVDAPSW 204
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
N+HP YC+NV I VTILAP SPNTDGIDPDSSS V IED YI +GDD +AVKSGWDEY
Sbjct: 205 NLHPTYCTNVTISGVTILAPVHSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEY 264
Query: 145 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
GI + PS I +RR+T SP S IA+GSE SGG+++V AE N + +K+ +G
Sbjct: 265 GIKFNMPSQHIVVRRLTCISPTSAMIALGSEMSGGIQDVRAEDNIAINTESAVRIKSGVG 324
Query: 204 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
RGGF++++ V + + + + G+ G HPD+ NP ALP V GI +DV+ V +
Sbjct: 325 RGGFVKDVFVRGLSLHTMKWVFWMTGNYGQHPDNSSNPKALPEVTGINYRDVFAENVTMA 384
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 317
G ++G+ N P+TGIC+SN+ Q C+DV G A V P PC EL +
Sbjct: 385 GRMEGIPNDPYTGICMSNVTAQLAPDAKKLQWNCTDVKGVASGVSPKPCPELGA 438
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 144/304 (47%), Positives = 187/304 (61%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF+S S + GENGTIDGQG WW +++ L +TRP LIE M+S I ISN+
Sbjct: 161 RFISLLFGSNLTDVVITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNL 220
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSP W+IHPVY SN+ I+ +TILAP PNTDGI+PDS +N IED YI +GDD +A
Sbjct: 221 TFLNSPSWHIHPVYSSNIYIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIA 280
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI YG P+ + IRR+T SP S IA+GSE SGG+E+V AE I N G
Sbjct: 281 VKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESG 340
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT IGRGG+++++ V + M + + G G HPDD ++P ALPV+ I +D+
Sbjct: 341 IRIKTAIGRGGYVKDVYVRGMTMMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDM 400
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + G+ FTGIC+SN+ + P C+DVSG V P PC L
Sbjct: 401 VAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLL 460
Query: 316 SSSQ 319
Q
Sbjct: 461 PEKQ 464
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 189/283 (66%), Gaps = 1/283 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG IDGQG WWN +R L ++RP+L+EF +S I+ISN+ F NSP W IHPVYCSN
Sbjct: 147 GNNGVIDGQGLTWWNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYCSN 206
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V + +TI D+P +DGI PDS SNVCIEDS IS D +++KSGWD YGI +G P+S
Sbjct: 207 VTVNNITIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTS 266
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I RV + + +A+GSE SGG+ +V +H++++ G+ +T GRGG+IR++
Sbjct: 267 DIHICRVDLQASLGAALALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVI 326
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV ME+ I+ GD HPD+ F+P+ALPV++GIT+K++ GT + +G++ G+
Sbjct: 327 ISDVQMEDVHVAIEFTGDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGD 386
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFT ICLSN+N S CS++SG + V P PC++L
Sbjct: 387 PFTDICLSNVNFSIPDSAHSTSWSCSNISGYSELVFPEPCTDL 429
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 196/296 (66%), Gaps = 5/296 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQG+ WWN +R L ++RP+L+EF++S I+ISN+ F NSP W+IHPVYCSN
Sbjct: 151 GNNGTIDGQGSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSN 210
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
VV+ VTI D+P GI PDS SN+CIEDS IS D +++KSGWD+ GIA+G P+S
Sbjct: 211 VVVHSVTIQTSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTS 270
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I R+ S + + GSE SGG+ +V A+ + +++ G+ KT GRGG+IR+
Sbjct: 271 DIHISRLDLQSSLGAALTFGSEMSGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTV 330
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV ME+ I GD HPDD+F+P ALPVV+ IT+K++ GT++ +G++ G+
Sbjct: 331 ISDVQMEDVDVAIAFTGDWPSHPDDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGD 390
Query: 273 PFTGICLSNIN--LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGACS 325
PFT ICLSNIN L A PTS CS+VSG + V P PC +L + S CS
Sbjct: 391 PFTDICLSNINFSLADSASPTS-HWSCSNVSGYSELVFPEPCLDLQTQSSDASICS 445
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 188/304 (61%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF+S S + GENGTIDGQG WW +++ L +TRP LIE M+S I ISN+
Sbjct: 160 RFISLLFGSNLTDVVITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNL 219
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSP W+IHPVY N+ I+ +TILAP PNTDGI+PDS +N IED YI +GDD +A
Sbjct: 220 TFLNSPSWHIHPVYSRNIFIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIA 279
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGIAYG P+ + IRR+T SP S IA+GSE SGG+E+V AE I + G
Sbjct: 280 VKSGWDQYGIAYGMPTKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAIDSESG 339
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT IGRGG+++++ V + M+ + + G G HPD+ ++P ALPV+ I +D+
Sbjct: 340 IRIKTAIGRGGYVKDVYVRGMTMKTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDM 399
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + G+ FTGIC+SN+ + P C+DVSG V P PC L
Sbjct: 400 VAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPAPCQLL 459
Query: 316 SSSQ 319
Q
Sbjct: 460 PEKQ 463
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 190/300 (63%), Gaps = 1/300 (0%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
S + G+NGTI+GQG +WW+ + + L FTR +L+E + S +IIISNV F ++P+W
Sbjct: 146 SNLTDVIITGKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYW 205
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
N+HP YC+NV I VTILAP +SPNTDGIDPDSSS V IED YI +GDD VAVKSGWDEY
Sbjct: 206 NLHPTYCTNVTISGVTILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEY 265
Query: 145 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
GI + PS I IRR+T SP S IA+GSE SGG+ +V AE N + VK+ G
Sbjct: 266 GIRFNMPSQHIVIRRLTCVSPTSAMIALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAG 325
Query: 204 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
RGGF+R+I V + + + + G+ G HPD+ +PNA+P V GI DV+ V +
Sbjct: 326 RGGFVRDIFVRGLSLHTMKWVFWMTGNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMA 385
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 323
G ++G+ P+TGIC+SN+ + C++V G V P PC EL++ + A
Sbjct: 386 GRMEGIPKDPYTGICISNVTARLAPDAKELQWNCTNVKGVTSHVSPKPCPELAAEGKPCA 445
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/309 (44%), Positives = 191/309 (61%), Gaps = 1/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQGA WW+ + + L TRP LIE M S I IS++
Sbjct: 147 RYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIEIMYSDQIQISDL 206
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HP+Y NV+I+ +TILAP DSPNTDGIDPDS SN IED +I +GDD +A
Sbjct: 207 TLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDCFIVSGDDCIA 266
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI +G P+ + I+R+T SP S G+A+GSE SGG+ NV E+ N
Sbjct: 267 VKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIENFTGINTQSA 326
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT GRGGF+++I V +Y+ + + G+ HPDDKF+P ALP + I +DV
Sbjct: 327 VRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALPEITNINYRDV 386
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S ++G+ PFT IC+SN+ + A P C+DV G + V P PC+ L
Sbjct: 387 VAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSSDVVPPPCAPL 446
Query: 316 SSSQQTGAC 324
+ + ++G C
Sbjct: 447 AKAGKSGGC 455
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 4/311 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG WW ++ L TRP +IE M S + ISN+
Sbjct: 104 RFASLIFGTNLTDVVITGANGTIDGQGESWWKKYKSNELTQTRPYMIELMYSNGVQISNL 163
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVYC +V+IR +TILAP SPNTDGIDPDS SNV IE +YI +GDD +A
Sbjct: 164 TLLNSPNWNVHPVYCRDVIIRGLTILAPTHSPNTDGIDPDSCSNVRIEHNYIVSGDDCIA 223
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI + P+ + IR +T SP S IA+GSE SGG++NV AEHI + G
Sbjct: 224 IKSGWDEYGIRFNMPTQDVVIRHLTCISPTSATIALGSEMSGGIQNVRAEHITAIDTESG 283
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD---HPDDKFNPNALPVVNGITI 252
I VKT+ GRG F+RNI V + M+ + + G HPD +NP ALPV+ GI
Sbjct: 284 IRVKTSPGRGAFVRNIYVRKMTMKTMKYVFWMTGYYSSSRVHPDRHYNPRALPVIEGINY 343
Query: 253 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPC 312
D+ V G ++G+K F GICLSN+ + P C+++ G A V P PC
Sbjct: 344 MDMVAANVSMPGYLEGIKEDVFKGICLSNVTIGLAKKPKEMLWNCTNIEGVASGVTPQPC 403
Query: 313 SELSSSQQTGA 323
L S+ G
Sbjct: 404 GFLRESKAMGC 414
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/309 (44%), Positives = 191/309 (61%), Gaps = 1/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQGA WW+ + + L TRP LIE M S I IS++
Sbjct: 147 RYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIEIMYSDQIQISDL 206
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HP+Y NV+I+ +TILAP DSPNTDGIDPDS SN IED +I +GDD +A
Sbjct: 207 TLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDCFIVSGDDCIA 266
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI +G P+ + I+R+T SP S G+A+GSE SGG+ NV E+ N
Sbjct: 267 VKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIENFTGINTQSA 326
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT GRGGF+++I V +Y+ + + G+ HPDDKF+P ALP + I +DV
Sbjct: 327 VRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALPEITNINYRDV 386
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S ++G+ PFT IC+SN+ + A P C+DV G + V P PC+ L
Sbjct: 387 VAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSSDVVPPPCAPL 446
Query: 316 SSSQQTGAC 324
+ + ++G C
Sbjct: 447 AKAGKSGGC 455
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 186/304 (61%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF+S S + GENGTIDGQG WW +++ L +TRP LIE M+S I ISN+
Sbjct: 160 RFISLLFGSNLTDVVITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNL 219
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSP W+IHPVY N+ I+ +TILAP PNTDGI+PDS +N IED YI +GDD +A
Sbjct: 220 TFLNSPSWHIHPVYSRNIFIQSLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIA 279
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI YG P+ + IRR+T SP S IA+GSE SGG+E+V AE I N G
Sbjct: 280 VKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESG 339
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT IGRGG+++++ V + M + + G G HPD+ ++P ALPV+ I +D+
Sbjct: 340 IRIKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDM 399
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + G+ FTGIC+SN+ + P C+DVSG V P PC L
Sbjct: 400 VAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLL 459
Query: 316 SSSQ 319
Q
Sbjct: 460 PEKQ 463
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/308 (45%), Positives = 195/308 (63%), Gaps = 1/308 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+++ S + G+NGTI+GQG +WW+ + + L TR +L+E ++S +IIISNV
Sbjct: 138 RYINFIGGSNLTDVIITGKNGTINGQGQVWWDKFHAKELKSTRGHLLELLHSDNIIISNV 197
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F ++P+WN+HP YC+NV I VTILAP +SPNTDGIDPDSS++V IED YI +GDD VA
Sbjct: 198 TFVDAPYWNLHPTYCTNVTISGVTILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVA 257
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI + PS I IRR+T SP S IA+GSE SGG+ +V AE N
Sbjct: 258 VKSGWDEYGIKFNMPSQHIVIRRLTCISPTSAMIALGSEMSGGIRDVRAEDNIAINTESA 317
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +K+ GRGGF+++I V + + + + G+ G HPD+ NPNA+P V GI DV
Sbjct: 318 VRIKSGAGRGGFVKDIFVRGLSLHTMKWVFWMTGNYGQHPDNTSNPNAMPEVTGINYSDV 377
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
+ V +G ++G+ N P+TGIC+SN+ T C++V G V P PC EL
Sbjct: 378 FAENVTTAGRMEGIPNDPYTGICISNVTASLAPNATELQWNCTNVKGVTSNVSPKPCPEL 437
Query: 316 SSSQQTGA 323
+ + A
Sbjct: 438 GAEGKPCA 445
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 187/304 (61%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S + + G NGTIDGQGA WW +++ L TRP LIE M S + ISN+
Sbjct: 149 RLSSLIFGTNLTDVVVTGANGTIDGQGAYWWGKFKKNQLDVTRPYLIEIMYSNQVQISNL 208
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSP WN+HP+Y SNV+I+ +TILAP DSPNTDGIDPDS +++ IED YI +GDD +A
Sbjct: 209 TFVNSPSWNVHPIYSSNVIIQGLTILAPVDSPNTDGIDPDSCTDIRIEDCYIVSGDDCIA 268
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI G P+ + IRRVT SP S IA+GSE SGG+ +V AE I + G
Sbjct: 269 VKSGWDQYGIKVGMPTQRLVIRRVTCISPDSATIALGSEMSGGIRDVRAEDITAIDTQSG 328
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + M+ + + G G HPD F+P ALP ++GI +D+
Sbjct: 329 VRIKTGVGRGGYVKDIYVRRMTMKTMKYVFWMTGSYGQHPDPGFDPKALPDIHGINYRDM 388
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S + G+ N PF GIC+ N+ + P C+DV G +V P CS L
Sbjct: 389 VAENVTYSARLDGIPNDPFKGICIFNVTITLTKKPKELQWNCTDVQGVTSRVTPPACSLL 448
Query: 316 SSSQ 319
+
Sbjct: 449 PEKK 452
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 185/300 (61%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG+ WW+ + + L TRP +IE M S I ISN+
Sbjct: 145 RFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNL 204
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HP+Y SN+ I+ +TILAP DSPNTDGIDPDS +N IED YI +GDD VA
Sbjct: 205 TLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVA 264
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SP S IA+GSE SGG+++V E I N
Sbjct: 265 VKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSA 324
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + + + + G G HPD F+P ALP + GI +DV
Sbjct: 325 VRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDV 384
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
T V S ++G+ N PFTGIC+SN+++Q C+DV+G V P C L
Sbjct: 385 VATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDVAGVTSNVTPNTCQLL 444
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 185/300 (61%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG+ WW+ + + L TRP +IE M S I ISN+
Sbjct: 146 RFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HP+Y SN+ I+ +TILAP DSPNTDGIDPDS +N IED YI +GDD VA
Sbjct: 206 TLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SP S IA+GSE SGG+++V E I N
Sbjct: 266 VKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSA 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + + + + G G HPD F+P ALP + GI +DV
Sbjct: 326 VRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDV 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
T V S ++G+ N PFTGIC+SN+++Q C+DV+G V P C L
Sbjct: 386 VATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDVAGVTSNVTPNTCQLL 445
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 188/300 (62%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + G NGTIDGQG WW ++ Q L +TRP LIE M S I IS++
Sbjct: 159 RYISLIFGTNLTDVVITGNNGTIDGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSL 218
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++I+ +TI+AP SPNTDGI+PDS +NV IED YI +GDD VA
Sbjct: 219 TLLNSPAWNVHPVYSSNILIQGITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVA 278
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI++G P+ + +RR+T SP S IA+GSE SGG+E+V AE I + G
Sbjct: 279 VKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESG 338
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT IGRGG++++I V + M + + GD G H D ++P+ALPV+ GI KD+
Sbjct: 339 VRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDM 398
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
+ ++G+ FT IC+SN+ + P C+D+ G QV P PC L
Sbjct: 399 VVENATMAARLEGISGDTFTDICISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLL 458
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 188/300 (62%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + G NGTIDGQG WW ++ Q L +TRP LIE M S I IS++
Sbjct: 159 RYISLIFGTNLTDVVITGNNGTIDGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSL 218
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++I+ +TI+AP SPNTDGI+PDS +NV IED YI +GDD VA
Sbjct: 219 TLLNSPAWNVHPVYSSNILIQGITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVA 278
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI++G P+ + +RR+T SP S IA+GSE SGG+E+V AE I + G
Sbjct: 279 VKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESG 338
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT IGRGG++++I V + M + + GD G H D ++P+ALPV+ GI KD+
Sbjct: 339 VRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDM 398
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
+ ++G+ FT IC+SN+ + P C+D+ G QV P PC L
Sbjct: 399 VVENATMAARLEGISGDTFTDICISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLL 458
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 190/311 (61%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + GENGTIDGQG WW + ++ L +TRP LIE M S I ISN+
Sbjct: 141 RYSSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHKKKLKYTRPYLIEIMFSSDIQISNL 200
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++++ +TI+AP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 201 TLLNSPSWNVHPVYSSNIIVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVA 260
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI++G P+ + IRR+T SP+S IA+GSE SGG+++V AE I N
Sbjct: 261 VKSGWDEYGISFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIVAINTESA 320
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++++I V + + + + G+ G H D ++ NA P + GI +DV
Sbjct: 321 VRIKTAVGRGAYVKDIYVRRMTLHTMKWAFWMTGNYGSHADGNYDKNAFPEITGINYRDV 380
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ + PFTGIC+SN+ + P C+D+ G V P PC L
Sbjct: 381 VAENVTMAARLEGIADHPFTGICMSNVTIGLAKKAKKQPWTCTDIQGITSGVTPTPCGLL 440
Query: 316 --SSSQQTGAC 324
+ + G C
Sbjct: 441 PDQGTDKPGGC 451
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 192/304 (63%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTI+GQG WW+ ++++ TRP LIE + S++I ISN+
Sbjct: 139 RFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNI 198
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+SP WNIHPVYC++V+++ VT+LAP PNTDGI+PDS +N IED YI +GDD +A
Sbjct: 199 TLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIA 258
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI +G P+ ++IRR+T SP S G+A+GSE SGG+++V E + L N
Sbjct: 259 VKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESA 318
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT +GRG ++++I + M+ + ++G+ G HPD+ F+P ALP + I +D+
Sbjct: 319 IRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDM 378
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S + G+ PFTGIC+SN+ + A C+DV+G +V P PCS L
Sbjct: 379 TAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLL 438
Query: 316 SSSQ 319
+
Sbjct: 439 PEKK 442
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 192/301 (63%), Gaps = 2/301 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G+NGTIDGQGA WW + + L +TRP LIE M S I ISN+
Sbjct: 163 RYTSFIFGTNLTDVIVTGDNGTIDGQGAFWWQQFYNKRLNYTRPYLIELMFSDKIQISNL 222
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSP WN+HPVY SN++I+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 223 TFLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 282
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDE+GI +G P+ + IRR+T SP S IA+GSE SGG+++V AE I + G
Sbjct: 283 VKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIALGSEMSGGIQDVRAEDITAIHTESG 342
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD-KFNPNALPVVNGITIKD 254
+ +KT+IGRGG++++I V + M + + G+ G + ++ ++P ALP + GI +D
Sbjct: 343 VRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGNYGSYANNSHYDPKALPEIKGINYRD 402
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 314
V V + ++G+ NSPFTGIC++N+ + P C+D+ G V P PC+
Sbjct: 403 VVADNVTMAATLEGISNSPFTGICIANVTISMADKANEKPWTCTDIEGITSGVTPKPCNS 462
Query: 315 L 315
L
Sbjct: 463 L 463
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 144/311 (46%), Positives = 189/311 (60%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQGA WW + ++ L +TRP LIE M S SI ISN+
Sbjct: 148 RFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++I+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 208 TLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVA 267
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SPFS IA+GSE SGG+++V AE I G
Sbjct: 268 VKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESG 327
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V M + K+ GD H D F+PNALP + I +DV
Sbjct: 328 VRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDV 387
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + QG+ N PF GIC++N+ L C+D+ G V P PC L
Sbjct: 388 VAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLL 447
Query: 316 SSS--QQTGAC 324
++ GAC
Sbjct: 448 PDQGPEKIGAC 458
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/300 (46%), Positives = 191/300 (63%), Gaps = 1/300 (0%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
S + G NGTI+GQG +WW+ + + L +TR L+E + S +IIISNV F +SP W
Sbjct: 141 SNLTDVIITGRNGTINGQGQVWWDKFHAKELTYTRGYLLELLYSNNIIISNVTFVDSPSW 200
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
N+HP YC+NV I +TILAP +SPNTDGIDPDSSS+V IEDSYI +GDD +AVKSGWD+Y
Sbjct: 201 NLHPTYCTNVTISGITILAPLNSPNTDGIDPDSSSHVKIEDSYIVSGDDCIAVKSGWDQY 260
Query: 145 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
GI + PS I IRR+T SP S IA+GSE SGG+ +V A + + +K+ +G
Sbjct: 261 GIKFNMPSQHILIRRLTCISPTSAMIALGSEMSGGIRDVRAVDNVAIDTESAVRIKSGVG 320
Query: 204 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
RGG+++++ V + + + + G+ G HPD+ +PNALP V GI DV+ V +
Sbjct: 321 RGGYVKDVFVRGLSLHTMKWVFWMTGNYGQHPDNSSDPNALPEVTGINYSDVFAENVTMA 380
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 323
G ++G+ N P+TGIC+SN+ Q C+DV G A V P PC EL ++ + A
Sbjct: 381 GRMEGIPNDPYTGICMSNVTAQLAPDAKKLQWNCTDVKGVASDVSPVPCPELGAAGKPCA 440
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 189/305 (61%), Gaps = 1/305 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG+ WW+ + + + TRP +IE M S I ISN+
Sbjct: 149 RFSSLVFGTNLTDVIITGNNGTIDGQGSYWWDKFHKGQMKITRPYMIEIMYSDQIQISNL 208
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HPVY SN++I +TILAP D PNTDGIDPDS +NV IED+YI +GDD +A
Sbjct: 209 TLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPDSCTNVRIEDNYIVSGDDCIA 268
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI +G PS I IRR+T SP S +A+GSE SGG+++V E +
Sbjct: 269 IKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEMSGGIQDVRVEDVTAIKTESA 328
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT IGRG ++++I V + ++ + + G HPD+ F+PNALP ++ I +DV
Sbjct: 329 VRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHPDNGFDPNALPKISEINYRDV 388
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V +G + G+ N PFTGIC+SN ++ A P C+DVSG V P PC L
Sbjct: 389 TAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPWNCTDVSGVTSNVSPTPCELL 448
Query: 316 SSSQQ 320
+ ++
Sbjct: 449 AEKEK 453
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/311 (46%), Positives = 189/311 (60%), Gaps = 3/311 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQGA WW + ++ L +TRP LIE M S SI ISN+
Sbjct: 148 RFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKELKYTRPYLIELMFSDSIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++I+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 208 TLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVA 267
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGI +G P+ + IRR+T SPFS IA+GSE SGG+++V AE I G
Sbjct: 268 VKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESG 327
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V M + K+ GD H D F+PNALP + I +DV
Sbjct: 328 VRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDV 387
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + QG+ N PF GIC++N+ L C+D+ G V P PC L
Sbjct: 388 VAENVTIAARFQGIFNDPFKGICIANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLL 447
Query: 316 SSS--QQTGAC 324
++ GAC
Sbjct: 448 PDQGPEKIGAC 458
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 192/305 (62%), Gaps = 3/305 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S S + G NGTIDGQGA WW+ ++ L +TR LIE M+S +I ISNV
Sbjct: 168 RYTSLISGSNLTDVVITGNNGTIDGQGATWWSKYKSGKLKYTRGYLIELMSSDTIFISNV 227
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVY N+VI+ VTILAP SPNTDGI+PDS S V IED Y+ +GDD VA
Sbjct: 228 TLLNSPAWNIHPVYSKNIVIQGVTILAPTRSPNTDGINPDSCSQVRIEDCYVVSGDDCVA 287
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGIA G P+ + +RR+T SP S +A+GSE SGGV +V E + +
Sbjct: 288 IKSGWDEYGIAAGIPTEHVIVRRLTCVSPTSALVAIGSEMSGGVRDVRIEDVAAVDTESA 347
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++++I + + ++ + GD HPDD ++ A+PVV G++ +DV
Sbjct: 348 VRIKTAVGRGAYVKDIYARRMTLTGMKRVFWMTGDYKSHPDDGYDKTAVPVVEGVSFQDV 407
Query: 256 WGTKV-QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 314
T V +++ ++G+ +PF GIC++N+ ++ + P C+DV G + V P PC +
Sbjct: 408 AATGVWKEAARMEGISGAPFKGICMANVTME-MTKPRKVMWNCADVEGVSTGVTPAPCGQ 466
Query: 315 LSSSQ 319
L Q
Sbjct: 467 LQQKQ 471
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 193/310 (62%), Gaps = 1/310 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + IG NGTI+GQG +WW+ ++Q+ L TRP LIE M S + ISN+
Sbjct: 98 RFSSLIFGTNLTDVVIIGGNGTINGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNL 157
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+SP WN+HPVYCS+V+I+ +TILAP D PNTDGI+PDS +NV IED YI +GDD +A
Sbjct: 158 TLIDSPSWNVHPVYCSDVIIQGMTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIA 217
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI YG P+ I IRR+T SP S IA+GSE SGG++NV AE I N G
Sbjct: 218 VKSGWDQYGIKYGVPTRDIVIRRLTCISPDSAVIALGSEMSGGIKNVRAEDITAINSQSG 277
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I + M+ + + D G HPDD+++ A+P + I ++V
Sbjct: 278 VRIKTGVGRGGYVQDIYARKMTMKTMKYVFWMTSDYGSHPDDEWDRKAIPKIENINYREV 337
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S + G+ FTGIC+S++ ++ P C++V G QV P C L
Sbjct: 338 VAENVTYSARLDGIAGDKFTGICISDVTIRLTQKPKQLQWNCTNVEGVTSQVTPQSCDLL 397
Query: 316 SSSQQTGACS 325
S+ C+
Sbjct: 398 PPSKGPLQCT 407
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 200/303 (66%), Gaps = 1/303 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + G+N IDGQG++WW++ +L ++RP++IE + S +I ISN+
Sbjct: 133 RYRSLIYGQNLSDVVITGDNAIIDGQGSVWWDLIGTHSLNYSRPHIIELVGSDNITISNL 192
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSP W+IHPVYCSNV I+ +T+ AP + P T GI PDSS +VCI +S ISTG D +
Sbjct: 193 TFLNSPAWSIHPVYCSNVQIQKITVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIV 252
Query: 137 VKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWD+YG+AYG P+S + IR V SS +G+A GSE SGG+ +++AE +++ N +G
Sbjct: 253 LKSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTIG 312
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++NI +SD +EN GI + G G HPDDK++PNA+P V +T ++V
Sbjct: 313 IELKTTKGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENV 372
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
GT + +G G+ +SPFT ICL N + +SP CSD+ G + +V P PC +L
Sbjct: 373 IGTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESSSPSWFCSDIMGISEEVFPEPCPDL 432
Query: 316 SSS 318
++
Sbjct: 433 QNT 435
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 189/304 (62%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTI+GQG WW+ ++++ TRP LIE + S++I ISN+
Sbjct: 139 RFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKLTRPYLIELLFSKNIQISNI 198
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+SP WNIHPVYC+NV+++ VT+LAP PNTDGI+PDS +N IED YI +GDD +A
Sbjct: 199 TLIDSPSWNIHPVYCNNVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIA 258
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI +G P+ ++IRR+T SP S G+A+GSE SGG+++V E + L N
Sbjct: 259 VKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESA 318
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRG ++++I + M+ + ++G+ HPD+ F+P ALP V I +D+
Sbjct: 319 IRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSHPDEGFDPKALPEVTNINYRDM 378
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S + G+ PFTGIC+SN+ + C+DV+G +V P PCS L
Sbjct: 379 TAENVTMSASLDGIHKDPFTGICISNVTIALADKAKKVQWNCTDVAGVTSRVTPEPCSLL 438
Query: 316 SSSQ 319
+
Sbjct: 439 PEKK 442
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 194/310 (62%), Gaps = 4/310 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S S + G NGTIDGQGA WW+ ++ L +TR LIE M++ + ISNV
Sbjct: 143 RYASLVSGSNLTDVVITGNNGTIDGQGATWWSKYKSGKLKYTRGYLIELMHTDGVFISNV 202
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVY N+V+ VTILAP SPNTDGI+PDS S V IED Y+ +GDD VA
Sbjct: 203 TLVNSPAWNIHPVYSRNIVVSGVTILAPVKSPNTDGINPDSCSQVRIEDCYVVSGDDCVA 262
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGIA G PS I++RR+T SP S IA+GSE SGG+ +V AE I
Sbjct: 263 IKSGWDEYGIAVGMPSEHISVRRLTCVSPTSAVIALGSEMSGGIRDVRAEDITAIGTESA 322
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++R++ + ++ ++ + GD HPDD ++ A+PVV I+ +DV
Sbjct: 323 VRIKTAVGRGAYVRDVYARRMRLDGMKRVFWMTGDYKSHPDDGYDKAAVPVVENISYQDV 382
Query: 256 WGTKV-QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSE 314
T V +++ +QG++ +PF GIC++N+ ++ + C+DV G + V P PC+
Sbjct: 383 VATGVWKEAARMQGIQGAPFKGICMANVTME-MTKERKVSWNCADVEGVSAGVTPAPCAP 441
Query: 315 LSSSQQTGAC 324
L + GAC
Sbjct: 442 LQGTHG-GAC 450
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 199/303 (65%), Gaps = 2/303 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + G+NG IDGQG++WW++ +L ++RP++IE + S +IIISN+
Sbjct: 133 RYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNL 192
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSP W+IHPVYCSN+ I+ +T+ AP P T GI PDSS +VCI++ ISTG D +
Sbjct: 193 TFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIV 252
Query: 137 VKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYG+AYG P+S + IR V SS +G+A GSE SGG+ +++AE +++ N G
Sbjct: 253 LKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTFG 312
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +KT GRGG+++NI +SD +EN GI + G G HPDDK++PNA+P V +T ++V
Sbjct: 313 IELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENV 372
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + +G G+ +SPFT ICLSN+ + + CS+V G + +V P PC +L
Sbjct: 373 IGANIAIAGNFSGIVDSPFTPICLSNVTFSTSSESSPSWF-CSNVMGISKEVFPEPCPDL 431
Query: 316 SSS 318
++
Sbjct: 432 QNT 434
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 189/290 (65%), Gaps = 1/290 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NG IDGQG++WW+ L +RP+++EF++S ++ISN+ F NSP W+I
Sbjct: 138 LSDVVITGNNGVIDGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSI 197
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNV + VTI D+P TDGI PDS SNVCIEDS IS G D +++KSGWD YGI
Sbjct: 198 HPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGI 257
Query: 147 AYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
++G P+S I I RV +S + +A+GSE SGG+ ++ +HI + + GI +T GRG
Sbjct: 258 SFGRPTSDIHISRVDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRG 317
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I + V+DV M++ I+ G+ HPDD F+P+ LPV++ IT+K++ GT + +G+
Sbjct: 318 GYIAEVVVADVVMDSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGV 377
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
+ G++ PF+ ICLSN+N S CS+V G + V P PCSEL
Sbjct: 378 LSGIEGDPFSAICLSNLNFSIADSAPSSAWTCSNVHGYSELVFPKPCSEL 427
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 187/300 (62%), Gaps = 1/300 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQGA WW + + L +TRP LIE M S +I ISN+
Sbjct: 136 RYSSLIFGTNLTDVIITGNNGTIDGQGAFWWQNFHKGKLKYTRPYLIEIMFSDTIQISNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY +++++ +TI+AP SPNTDGI+PDS +N IED YI +GDD VA
Sbjct: 196 TLLNSPSWNVHPVYSRDILVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVA 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGIA+G P+ + IRR+T SP+S IA+GSE SGG+E+V AE I + G
Sbjct: 256 VKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIEDVRAEDITAIHTESG 315
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + M + + G+ G H D ++PNALP++ GI +D+
Sbjct: 316 VRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADKNYDPNALPLIQGINYRDM 375
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ PF IC+SN+ + P C+++ G V P PC L
Sbjct: 376 VADNVTMAARLEGIAGDPFKEICISNVTIGLAPKAKKVPWTCTEIEGMTSGVSPRPCDLL 435
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 190/286 (66%), Gaps = 4/286 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGT DGQGA WW +L ++RP++IEF++S+ I+ISN+ F N+P NIHPVYCS
Sbjct: 150 GENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQ 209
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
+ IR V I DSP+ G+ PDSS NVCIEDS I+ G D V++KSGWD+YGI YG P++
Sbjct: 210 IHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTT 269
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ IR + SP +GI+ GSE SGGV +V E +N+++ +G+ +T GRGG+IRNIT
Sbjct: 270 AVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNIT 329
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV + + I G G HPDDKF+ +ALPVV I +++ G + +G + G+ S
Sbjct: 330 ISDVDLTSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGES 389
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 318
PFT ICL++I+LQ + CS+VSG + V P PC EL SS
Sbjct: 390 PFTSICLADIHLQ---TRSEESWICSNVSGFSDDVSPEPCQELMSS 432
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/309 (44%), Positives = 186/309 (60%), Gaps = 3/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG WW+ + + L TRP +IE M S I ISN+
Sbjct: 146 RFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMIEIMFSDHIQISNL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HP+Y S+++I+ +TILAP DSPNTDGIDPDS SN+ IED YI +GDD VA
Sbjct: 206 TLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPDSCSNIRIEDCYIVSGDDCVA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI +G PS I IRR+ SP S IA+GSE SGG+++V AE + N
Sbjct: 266 IKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIQDVRAEDLTAINTQSA 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++R+I + + + + + G HPD+ F+P LP + GI +DV
Sbjct: 326 VRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMTGSYSSHPDNGFDPKTLPNITGINYRDV 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S ++G+ N PFTGIC+SN+ + +G C+D+ G V P PC L
Sbjct: 386 IAENVTYSARLEGIANDPFTGICISNVTIH--SGKKKLQWNCTDIEGVTSNVYPKPCELL 443
Query: 316 SSSQQTGAC 324
Q+ C
Sbjct: 444 PLKQEKIEC 452
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 190/286 (66%), Gaps = 4/286 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGT DGQGA WW +L ++RP++IEF++S+ I+ISN+ F N+P NIHPVYCS
Sbjct: 148 GENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQ 207
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
+ IR V I DSP+ G+ PDSS NVCIEDS I+ G D V++KSGWD+YGI YG P++
Sbjct: 208 IHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTT 267
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ IR + SP +GI+ GSE SGGV +V E +N+++ +G+ +T GRGG+IRNIT
Sbjct: 268 AVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNIT 327
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV + + I G G HPDDKF+ +ALPVV I +++ G + +G + G+ S
Sbjct: 328 ISDVDLTSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGES 387
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 318
PFT ICL++I+LQ + CS+VSG + V P PC EL SS
Sbjct: 388 PFTSICLADIHLQ---TRSEESWICSNVSGFSDDVSPEPCQELMSS 430
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 190/286 (66%), Gaps = 4/286 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGT DGQGA WW +L ++RP++IEF++S+ I+ISN+ F N+P NIHPVYCS
Sbjct: 148 GENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQ 207
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
+ IR V I DSP+ G+ PDSS NVCIEDS I+ G D V++KSGWD+YGI YG P++
Sbjct: 208 IHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTT 267
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ IR + SP +GI+ GSE SGGV +V E +N+++ +G+ +T GRGG+IRNIT
Sbjct: 268 AVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNIT 327
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV + + I G G HPDDKF+ +ALPVV I +++ G + +G + G+ S
Sbjct: 328 ISDVDLTSVDTAIVTNGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGES 387
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 318
PFT ICL++I+LQ + CS+VSG + V P PC EL SS
Sbjct: 388 PFTSICLADIHLQ---TRSEESWICSNVSGFSDDVSPEPCQELMSS 430
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 189/290 (65%), Gaps = 1/290 (0%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NG IDGQG++WW+ L +RP+++EF++S ++ISN+ F NSP W+I
Sbjct: 138 LSDVVITGNNGVIDGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSI 197
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPVYCSNV + VTI D+P TDGI PDS SNVCIEDS IS G D +++KSGWD YGI
Sbjct: 198 HPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGI 257
Query: 147 AYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
++G P+S I I RV +S + +A+GSE SGG+ ++ +HI + + GI +T GRG
Sbjct: 258 SFGRPTSDIHISRVDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRG 317
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G+I + V+DV M++ I+ G+ HPDD F+P+ LPV++ IT+K++ GT + +G+
Sbjct: 318 GYIAEVVVADVVMDSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGV 377
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
+ G++ PF+ ICLSN+N S CS+V G + V P PCSEL
Sbjct: 378 LSGIEGDPFSAICLSNLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSEL 427
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/298 (46%), Positives = 188/298 (63%), Gaps = 3/298 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
E I G NGTIDG G WW + + L TR LI+FM SR I IS+V +NSPFW +
Sbjct: 155 LEDIVITGHNGTIDGNGRKWWEKAKLKQLKHTRGRLIQFMWSRGIEISDVTLRNSPFWTV 214
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HP C NV IR VTI+AP D+PNTDGIDPDS NV IE+ YIS GDD VAVKSGWD+YGI
Sbjct: 215 HPYDCENVTIRGVTIIAPPDAPNTDGIDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGI 274
Query: 147 AYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
YG P + ITIR + ++P S G+++GSE SGG+ NV E++ ++N G+ +KT GRG
Sbjct: 275 DYGKPCANITIRNIQVNAPVSAGVSIGSEMSGGITNVTVENVYIWNSKRGVRIKTTPGRG 334
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G++ + ++ ME R GI I D GDHPD+ ++P ALPVV I ++G++V+
Sbjct: 335 GYVTQVFYRNITMETVRVGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPAR 394
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G K P G+ + ++N+ GV +CS + G + + P PC +L +S + G
Sbjct: 395 IYGSKEVPVRGLEIRDMNV-GVTRKKKHVFQCSFLQGQVFGTIFPKPCEDLGTSSRPG 451
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 190/309 (61%), Gaps = 1/309 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S + + G NGTI GQG WW+ +R L TRP LIE M S + ISN+
Sbjct: 138 RHASLIFGTNLTDVVITGGNGTIHGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNL 197
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
I +SP WN+HP Y SNV+I+++TI+AP SPNTDGI+PDSS NV IED +I +GDD +A
Sbjct: 198 ILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIA 257
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWD+YGI +G P+ + IRR+T SP S IA+GSE SGG++NV AE+I + G
Sbjct: 258 VKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEMSGGIKNVRAENITAIDSESG 317
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +K+ +GRGG++++I + M+ + + GD G HPDD ++P ALP + I +D+
Sbjct: 318 VRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHPDDGWDPKALPKIENINYRDM 377
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S + G+ PFTGIC+SN+ + P C++V G + QV P C L
Sbjct: 378 VAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDLL 437
Query: 316 SSSQQTGAC 324
S++ C
Sbjct: 438 HPSKKVFNC 446
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/283 (48%), Positives = 185/283 (65%), Gaps = 1/283 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G+NGTIDGQG+ WW + + L +TRP LIE M S +I ISN+ +SP WNIHPVY SN
Sbjct: 165 GDNGTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSN 224
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
++I+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+
Sbjct: 225 IIIKGITIIAPIRSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTK 284
Query: 154 GITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ IRR+T SP+S IA+GSE SGG+++V AE I + GI +KT +GRGG++++I
Sbjct: 285 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIY 344
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
V + M + I G+ G H D +N +ALP + I +D+ V +G ++G+ N
Sbjct: 345 VKKMTMHTMKWAFWITGNYGSHADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISND 404
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFTGIC+SN+ + A P C+D+ G V P PC L
Sbjct: 405 PFTGICISNVTITMAAKAKKQPWTCNDIEGITSGVTPKPCDLL 447
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 138/298 (46%), Positives = 187/298 (62%), Gaps = 3/298 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
E I G NGTIDG G WW +++ L TR LI+ M SR I IS+V +NSPFW +
Sbjct: 155 LEDIVITGHNGTIDGNGRKWWEKAKRKQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTV 214
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HP C NV IR VTI+AP D+PNTDGIDPDS NV IE YIS GDD VAVKSGWD+YGI
Sbjct: 215 HPYDCENVTIRGVTIIAPPDAPNTDGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGI 274
Query: 147 AYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
YG P + ITIR + ++P S G+++GSE SGG+ NV E++ ++N G+ +KT GRG
Sbjct: 275 DYGKPCANITIRNIQVNAPVSAGVSIGSEMSGGITNVTVENVFIWNSKRGVRIKTTPGRG 334
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G++ + ++ ME R GI I D GDHPD+ ++P ALPVV I ++G++V+
Sbjct: 335 GYVTQVFYRNITMETVRVGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPAR 394
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G K P G+ + ++N+ GV +CS + G + + P PC +L +S + G
Sbjct: 395 IYGSKEVPVRGLEIRDMNV-GVTRKKKHVFQCSFLQGEVFGTIFPKPCEDLGTSTRPG 451
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 188/286 (65%), Gaps = 5/286 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GENGT DGQGA WW +L ++RP++IEF++S+ I+ISN+ F N+P NIHPVYCS
Sbjct: 148 GENGTFDGQGAAWWEWLETGSLNYSRPHIIEFVSSKHILISNLTFLNAPSINIHPVYCSQ 207
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
+ IR V I DSP G+ PDSS NVCIEDS I+ G D V++KSGWD+YGI YG P++
Sbjct: 208 IHIRKVLIETSVDSPYVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTT 267
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
+ IR ++ SP +GI+ GSE SGG+ +V E +N+ + VG+ +T GRGG+IRNIT
Sbjct: 268 AVYIRNLSLKSPTGAGISFGSEMSGGISDVTVERLNIQSSHVGVAFRTTRGRGGYIRNIT 327
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV + + I G G HPDDKF+ +ALPVV I +++ G + +G + G+ S
Sbjct: 328 ISDVDLTSVDTAIVANGHTGSHPDDKFDWDALPVVTHIVLRNFTGVDIGLAGNLTGIGES 387
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 318
PFT ICL++I+L S CS+VSG + V P PC EL SS
Sbjct: 388 PFTSICLTDIHLH----THSDSWICSNVSGFSDDVSPEPCQELMSS 429
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 185/301 (61%), Gaps = 1/301 (0%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
+ + G NGT++GQG WW+ +R + TRP LIE M S + ISN+ +SP W
Sbjct: 153 TNLTDVVITGGNGTLNGQGKYWWDKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSW 212
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
N+HPVY NV+++ +TILAP DSPNTDGI+PDS V IED +I +GDD +AVKSGWD+Y
Sbjct: 213 NVHPVYSRNVLVKDLTILAPIDSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQY 272
Query: 145 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
G +G P+ + IRR+T SP S IA+GSE SGG++NV AE I + GI +KT IG
Sbjct: 273 GYKFGMPTKDLLIRRLTCISPDSATIALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIG 332
Query: 204 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
RGG++++I V + ++ + I GD G HPDD ++P ALPV+ I +D+ V S
Sbjct: 333 RGGYVKDIYVRRMTVKTMKYVFWITGDYGSHPDDGWDPKALPVIKNINYRDMVAENVTYS 392
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 323
+ G+ PFTGIC+SN+ + P C++V+G QV P C L S +
Sbjct: 393 ARLDGISGDPFTGICISNVTIGLTEKPKELQWNCTNVAGVTSQVTPRSCDLLPPSDKVFN 452
Query: 324 C 324
C
Sbjct: 453 C 453
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 185/305 (60%), Gaps = 3/305 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG+ WW+ + + L TRP +IE M S I ISN+
Sbjct: 146 RFSSLIFGTNLTDVVITGYNGTIDGQGSYWWDKFHKGELKLTRPYMIEIMFSDHIQISNL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+SP W +HP+Y S+++I+ +TILAP DSPNTDGI+PDS SN IED YI +GDD VA
Sbjct: 206 TLIDSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGINPDSCSNTRIEDCYIVSGDDCVA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDE GI +G PS I IRR+ SP S IA+GSE SGG+ +V AE + N
Sbjct: 266 IKSGWDESGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIRDVRAEELTALNTQSA 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++R+I V + + + + G G HP+ F+P ALP + GI +DV
Sbjct: 326 VRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHPNTDFDPKALPNITGINYRDV 385
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V S ++G+ N PFTGIC+SN+ + +G P C+D+ G V P PC L
Sbjct: 386 IADNVTYSARLEGIANDPFTGICISNVTIH--SGKKKPQWNCTDIEGVTSNVYPKPCELL 443
Query: 316 SSSQQ 320
++
Sbjct: 444 PLKEK 448
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 188/311 (60%), Gaps = 12/311 (3%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + I G NGTIDGQGA WW +++ L +TRP LIE M S +I ISN+
Sbjct: 147 RYSSLIFGTNLTDIIVTGNNGTIDGQGAFWWQQFKKGKLKYTRPYLIEIMYSDNIQISNL 206
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SN++I+ +TI+AP SPNTDGI+PD YI +GDD VA
Sbjct: 207 TLLNSPSWNVHPVYSSNILIQGITIIAPVTSPNTDGINPDC---------YIISGDDCVA 257
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGIA+G P+ + IRR+T SP+S IA+GSE SGG+++V AE I + G
Sbjct: 258 VKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDITAIHTESG 317
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRGG++++I V + M + + G+ G H D ++PNALPV+ GI +D+
Sbjct: 318 VRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTGNYGSHADKNYDPNALPVIEGINYRDM 377
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V + ++G+ PF IC+SN+ + A P C+D+ G V P PC L
Sbjct: 378 VADNVSMAARLEGISGDPFKQICISNVTIGMAAKAKKIPWTCTDIEGITTGVSPRPCDLL 437
Query: 316 SSS--QQTGAC 324
++ AC
Sbjct: 438 PDQGPEKLTAC 448
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/299 (45%), Positives = 188/299 (62%), Gaps = 3/299 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + ++ G NGTIDGQG IWWN +R +TL TR +L+EFM S +I++ NV
Sbjct: 152 RYTSLLHGLRITDVAITGNNGTIDGQGLIWWNRFRSKTLQHTRGSLVEFMFSSNILVHNV 211
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSPFW +HPVY S+V+I+ VTILAP +PNTDG+DPDSSSNVCI D+YIS GDD VA
Sbjct: 212 TLINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVA 271
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSGWDEYG+A+ PS + + +T S GI++GSE SGG+ NV A +++ GI
Sbjct: 272 VKSGWDEYGLAFNRPSHDVFLVNLTVSGS-HGISLGSEMSGGIYNVHAYGVSISGAVQGI 330
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KT+ GRG +IRN + + + + G GDHPD +N +A + I+ +DV
Sbjct: 331 HIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVV 390
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G +V ++G +G+ SPF C +++ L+ S CS + G + V P PC EL
Sbjct: 391 GMRVNRAGDFRGVPQSPFRHTCFTDVALE--LNGKSNHWNCSYIEGYSRHVSPPPCPEL 447
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 187/304 (61%), Gaps = 1/304 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG+ WW+ ++++ L TRP +IE M S I ISN+
Sbjct: 148 RFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP W +HP+Y SN++I +TILAP D PNTDGIDPDS +NV IED+YI +GDD +A
Sbjct: 208 TLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVLIEDNYIVSGDDCIA 267
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
+KSG D YGI G PS I +RR+T SP S +A+GSE SGG++++ E I N
Sbjct: 268 IKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMSGGIQDIRIEDITAINTESA 327
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT +GRG ++++I V + + + + G H ++ F+P ALP ++GI +D+
Sbjct: 328 VRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFDPKALPKISGINYRDI 387
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V +G + G+ N PFTGIC+SN+ ++ A + P C+DVSG A P PC L
Sbjct: 388 IAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDVSGVASNAVPKPCDML 447
Query: 316 SSSQ 319
+
Sbjct: 448 PEKK 451
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/299 (45%), Positives = 188/299 (62%), Gaps = 3/299 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + ++ G NGTIDGQG +WWN +R +TL TR +L+EFM S +I++ NV
Sbjct: 123 RYTSLLHGLRITDVAITGNNGTIDGQGLVWWNRFRSKTLQHTRGSLVEFMFSSNILVHNV 182
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSPFW +HPVY S+V+I+ VTILAP +PNTDG+DPDSSSNVCI D+YIS GDD VA
Sbjct: 183 TLINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVA 242
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSGWDEYG+A+ PS + + +T S GI++GSE SGG+ NV A +++ GI
Sbjct: 243 VKSGWDEYGLAFNRPSHDVFLVNLTVSGS-HGISLGSEMSGGIYNVHAYGVSISGAVQGI 301
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
H+KT+ GRG +IRN + + + + G GDHPD +N +A + I+ +DV
Sbjct: 302 HIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVV 361
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G +V ++G +G+ SPF C +++ L+ S CS + G + V P PC EL
Sbjct: 362 GMRVNRAGDFRGVPQSPFRHTCFTDVALE--LNGKSNHWNCSYIEGYSRHVSPPPCPEL 418
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 186/283 (65%), Gaps = 1/283 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG IDGQG WWN +R L ++RP+L+EF++S I+ISN+ NSP W IHPV+CSN
Sbjct: 153 GNNGIIDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSN 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V++ VTI D+P TDGI PDS SN+CIEDS IS D +++KSGWD YGI G P+S
Sbjct: 213 VMVHDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPAS 272
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I RV + + +A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++
Sbjct: 273 DIHISRVDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVV 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV ME+ IK GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+
Sbjct: 333 ISDVQMEDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFT ICLSNI+ S CS++SG + V P PC +L
Sbjct: 393 PFTNICLSNISFSLADSTQSSSWSCSNISGYSELVFPEPCPDL 435
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 186/283 (65%), Gaps = 1/283 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG IDGQG WWN +R L ++RP+L+EF++S I+ISN+ NSP W IHPV+CSN
Sbjct: 120 GNNGIIDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSN 179
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V++ VTI D+P TDGI PDS SN+CIEDS IS D +++KSGWD YGI G P+S
Sbjct: 180 VMVHDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPAS 239
Query: 154 GITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I RV + + +A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++
Sbjct: 240 DIHISRVDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVV 299
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV ME+ IK GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+
Sbjct: 300 ISDVQMEDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGD 359
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFT ICLSNI+ S CS++SG + V P PC +L
Sbjct: 360 PFTNICLSNISFSLADSTQSSSWSCSNISGYSELVFPEPCPDL 402
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 188/314 (59%), Gaps = 3/314 (0%)
Query: 16 FRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISN 75
R+ S E G NG+IDGQG WW +Q+ L +TR L+E M S +I+IS+
Sbjct: 129 LRYSSLIHGQHVEDFVLTGHNGSIDGQGGWWWEQHKQKRLRYTRGRLVELMWSTNIVISD 188
Query: 76 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
V QNSPFW++HP C+NV I VTILAP D+PNTDGIDPDS NV +E+ YIS GDD V
Sbjct: 189 VTLQNSPFWHLHPYDCTNVTISGVTILAPLDAPNTDGIDPDSCKNVLVENCYISVGDDAV 248
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGV 194
AVKSGWD+YGI Y P +TIR V S S GI++GSE SGGVE VL E + ++
Sbjct: 249 AVKSGWDKYGIEYNRPCVNVTIRNVIARSQISAGISIGSEMSGGVEQVLVEDVYIWGSRR 308
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
GI +KT+ GRGG+++NI ++ + + R GI + D G+HPD F+P ALPVV I+
Sbjct: 309 GIRIKTSPGRGGYVKNILYKNLTLIDVRVGIVVKTDYGEHPDLDFDPKALPVVANISFDG 368
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCS 313
V+G+ V+ + G K P TGI + N+N+ G+ C + G +V P PC
Sbjct: 369 VYGSSVRYPVRMFGSKEVPITGIDIRNMNV-GLTRKKRNVFTCDFLQGRVVGKVFPSPCK 427
Query: 314 ELSSSQQTGACSNH 327
L + + +
Sbjct: 428 ALIREEASQTATEE 441
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLP-FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G NGTI+GQG WW +R TRP IE + S+++ ISN+ +SP WNIHPVYC+
Sbjct: 166 GNNGTINGQGKYWWVKYRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCN 225
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
NV+++ VTILAP DSPNTDGI+PDS +N IED Y+ +GDD +AVKSGWD++GI G P+
Sbjct: 226 NVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPT 285
Query: 153 SGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
++IRR+T SP S GIA+GSE SGG+++V E I L I +KT +GRGG++++I
Sbjct: 286 QQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDI 345
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
M+ + ++G HP F+P A+PV+ I +D+ V Q + G KN
Sbjct: 346 FARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKN 405
Query: 272 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFT IC+SNI + A P C+ +SG + +V P PCS L
Sbjct: 406 DPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSSKVTPKPCSLL 449
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLP-FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G NGTI+GQG WW +R TRP IE M S+++ ISN+ +SP WNIHPVYC+
Sbjct: 166 GNNGTINGQGKYWWVKYRSGGFKNITRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCN 225
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
NV+++ VTILAP DSPNTDGI+PDS +N IED Y+ +GDD +AVKSGWD++GI G P+
Sbjct: 226 NVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPT 285
Query: 153 SGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
++IRR+T SP S GIA+GSE SGG+++V E I L I +KT +GRGG++++I
Sbjct: 286 KQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDI 345
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
M+ + ++G HP F+P A+P + I +D+ V Q + G KN
Sbjct: 346 FARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKN 405
Query: 272 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFT IC+SNI + A P C+++SG + +V P PCS L
Sbjct: 406 DPFTKICMSNIKIDLAAEPKKLLWNCTNISGVSSKVTPKPCSLL 449
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLP-FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G NGTI+GQG WW +R TRP IE + S+++ ISN+ +SP WNIHPVYC+
Sbjct: 166 GNNGTINGQGKYWWVKYRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCN 225
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
NV+++ VTILAP DSPNTDGI+PDS +N IED Y+ +GDD +AVKSGWD++GI G P+
Sbjct: 226 NVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPT 285
Query: 153 SGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
++IRR+T SP S GIA+GSE SGG+++V E I L I +KT +GRGG++++I
Sbjct: 286 QQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDI 345
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
M+ + ++G HP F+P A+PV+ I +D+ V Q + G KN
Sbjct: 346 FARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKN 405
Query: 272 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFT IC+SNI + A P C+ +SG + +V P PCS L
Sbjct: 406 DPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSSKVTPKPCSLL 449
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 2/284 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLP-FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G NGTI+GQG WW +R TRP IE + S+++ ISN+ +SP WNIHPVYC+
Sbjct: 155 GNNGTINGQGKYWWVKYRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCN 214
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
NV+++ VTILAP DSPNTDGI+PDS +N IED Y+ +GDD +AVKSGWD++GI G P+
Sbjct: 215 NVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPT 274
Query: 153 SGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
++IRR+T SP S GIA+GSE SGG+++V E I L I +KT +GRGG++++I
Sbjct: 275 QQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDI 334
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
M+ + ++G HP F+P A+PV+ I +D+ V Q + G KN
Sbjct: 335 FARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKN 394
Query: 272 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFT IC+SNI + A P C+ +SG + +V P PCS L
Sbjct: 395 DPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSSKVTPKPCSLL 438
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 187/283 (66%), Gaps = 1/283 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG IDGQG +WW L +RP+L+EF+ S I+ISN+ F NSP W+IHPVYCSN
Sbjct: 144 GNNGVIDGQGLVWWQWLLSHELNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSN 203
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V + VTI D+P TDGI PDS SN+CIEDS IS + +++KSGWD+YGI++G P+S
Sbjct: 204 VKVHNVTIETSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTS 263
Query: 154 GITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I RV SS + +A GSE SGG+ ++ H+ +++ GI KT+ GRGG+I +
Sbjct: 264 DIHISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVI 323
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+S+V MEN GI+ G+ HPDD F+ + LP ++ +T+K++ GT + +G++ G+ N+
Sbjct: 324 ISEVQMENVHVGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNA 383
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
PFT ICLSN+N A S CS+VSG + V P PC+EL
Sbjct: 384 PFTAICLSNLNFSMAADTGSSSWSCSNVSGYSEAVFPEPCTEL 426
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/293 (46%), Positives = 190/293 (64%), Gaps = 2/293 (0%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG I+GQG+IWW+ L +RP+L+EF++S I+ISN+ F NSP W+IHPVYCS
Sbjct: 153 GNNGVINGQGSIWWDWLHSHELNHSRPHLVEFLHSEEIVISNLTFLNSPAWSIHPVYCSK 212
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V + VTI +D+P TDGI PDSSSNV IEDS IS D +++KSGWD+YGI+ G P+S
Sbjct: 213 VKVHNVTIKTSSDAPLTDGIVPDSSSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPAS 272
Query: 154 GITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I I R+ +S + +A GSE SGG+ ++ A++I ++ GI KT GRGG+I +
Sbjct: 273 DIHISRMDLQASSGAALAFGSEMSGGISDIHADNIQIHGSNKGISFKTTPGRGGYIDEVV 332
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+SDV M++ I+ G+ HPD+ F+P+ LPV+ IT+KD+ GT + +G++ G+
Sbjct: 333 ISDVKMDDVIVAIEFTGNWSSHPDEDFDPSQLPVIGQITLKDMVGTNISVAGVLSGIDGD 392
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS-SQQTGAC 324
PFT ICLSN+N S CS+VSG + V P PCSEL + S + C
Sbjct: 393 PFTAICLSNVNFLMAESAHSSSWSCSNVSGYSESVFPEPCSELHTPSSNSSMC 445
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 186/308 (60%), Gaps = 4/308 (1%)
Query: 12 SNAIF-RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLP-FTRPNLIEFMNSR 69
NA+F R S + G NGT+DGQGA+WW + ++ L RP LIE M S
Sbjct: 102 ENAVFGRPGGLIFASNVTDVIITGNNGTVDGQGAVWWEKFNEKKLKKLERPYLIEIMYSD 161
Query: 70 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 129
+ ISN+ NSP W++HP+Y SN+ I+ VTILAP D PNTDGI+PDS +NV IED YI
Sbjct: 162 QVQISNITLINSPQWHVHPIYSSNLWIQGVTILAPVDVPNTDGINPDSCTNVIIEDCYIV 221
Query: 130 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHIN 188
+GDD +AVKSG D+YGI G P + IRR+T SP S IA+GSE SGG+E+V E I
Sbjct: 222 SGDDCIAVKSGLDQYGIKVGMPMKQLVIRRITCISPKSAAIALGSEMSGGIEDVRIEDIT 281
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 248
N + VKT +GRGG++++I V + ++ + + G H D+ ++P ALP +
Sbjct: 282 AINTESAVRVKTAVGRGGYVKDIFVRRMTLKTMKYVFWMIGSYSSHADEGYDPKALPEIT 341
Query: 249 GITIKDVWGTKVQQSGLIQGL-KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQV 307
I +D+ V G ++GL + +PFTGIC+SN+ + P C+DVSG + V
Sbjct: 342 NINFRDIAADNVTIPGKLEGLGEGNPFTGICISNVTMTLAEKHKEPAWNCTDVSGVSSNV 401
Query: 308 KPWPCSEL 315
P PC+ L
Sbjct: 402 TPMPCAAL 409
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 182/305 (59%), Gaps = 3/305 (0%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
+ + G NGTI+GQG WW +RQ+ L TR L++ M S I+I+N+ ++SPFW
Sbjct: 175 QHLKDVVITGHNGTINGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFW 234
Query: 85 NIHPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 143
IHP C N+ I+ VTILAP +PNTDGIDPDS ++ IED YIS GDD +AVKSGWD+
Sbjct: 235 TIHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQ 294
Query: 144 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
YGI YG PS I IR + S+PF+GI++GSE SGGV NV E++ +++ G+ +KT G
Sbjct: 295 YGIDYGRPSMNIMIRNLVKSTPFAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPG 354
Query: 204 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
RG ++R IT ++ EN R GI + D +HPDD ++P ALP++ I+ V G V+
Sbjct: 355 RGAYVRQITYRNITFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVP 414
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++++ G+ +C+ V G + P PC L + G
Sbjct: 415 VRIHGSEEIPVRNVTFKDMSV-GLTYKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQG 473
Query: 323 ACSNH 327
H
Sbjct: 474 QLVKH 478
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 185/304 (60%), Gaps = 4/304 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G NGTI+GQG WW +RQ+ L +TR L++ M S I+I+++ ++SPFW +
Sbjct: 248 LKDVVITGHNGTINGQGQAWWKKFRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTL 307
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C N+ I+ VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 308 HPYDCKNLTIKGVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYG 367
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS I IR + S S GI++GSE SGG+ NV E++ +++ G+ +KT GR
Sbjct: 368 IAYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGR 427
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG++R IT ++ EN R GI + D +HPDD ++P ALPV+ I+ +V+G V+
Sbjct: 428 GGYVRQITYRNITFENVRVGIVMKTDYNEHPDDGYDPTALPVIRDISFTNVYGHGVRVPV 487
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGA 323
I G + P + ++++ G+ +C+ V G + P PC L + G
Sbjct: 488 RIHGSEEIPVRNVTFRDMSV-GLTYKKKHIFQCAFVHGRVIGTIFPSPCENLDRYNEQGQ 546
Query: 324 CSNH 327
H
Sbjct: 547 LVKH 550
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 181/306 (59%), Gaps = 4/306 (1%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
+ + G NGTI+GQG WW +RQ+ L TR L++ M S I+I+N+ ++SPFW
Sbjct: 174 QHLKDVVITGHNGTINGQGQTWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFW 233
Query: 85 NIHPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 143
+HP C N+ I+ VTILAP +PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+
Sbjct: 234 TLHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQ 293
Query: 144 YGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 202
YGIAYG PS I IR + S S GI++GSE SGGV NV+ E+I +++ G+ +KT
Sbjct: 294 YGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGVSNVMVENILIWDSRRGVRIKTAR 353
Query: 203 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ 262
GRG ++R IT ++ EN R GI + D +HPDD ++P ALP++ I+ V G V+
Sbjct: 354 GRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDDGYDPMALPILRDISFTTVHGQGVRV 413
Query: 263 SGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQT 321
I G + P + ++++ G+ +C+ V G + P PC L +
Sbjct: 414 PVRIHGSEEIPVRNVTFQDMSV-GLTYKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQ 472
Query: 322 GACSNH 327
G H
Sbjct: 473 GQLVKH 478
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 187/309 (60%), Gaps = 4/309 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NG+I+GQG +WW R+R L TRP L++ M S+ III+N+
Sbjct: 175 RFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLVQLMWSKDIIIANI 234
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
+NSPFW++HP C+NV + VTIL+P + +PNTDGIDPDSS +V IE+ YIS GDD +
Sbjct: 235 TLRNSPFWHLHPYDCTNVTVSNVTILSPVSGAPNTDGIDPDSSQDVLIENCYISVGDDAI 294
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGV 194
A+KSGWD+YGIAYG PSS I+IR V S S GI++GSE SGGV NV E++ ++
Sbjct: 295 AIKSGWDQYGIAYGRPSSNISIRNVNARSLVSAGISIGSEMSGGVANVTVENVRIWESRR 354
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
G+ +KT GRGG+IRNI+ ++ +N R GI I D +H DD ++ A P + I+ K
Sbjct: 355 GVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGYDRTAFPDITSISFKG 414
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ-VKPWPCS 313
+ G V+ G P I ++++ G++ +CS V G + V P PC
Sbjct: 415 IHGRGVRVPVRAHGSDVIPIRDISFQDMSV-GISYKKKHIFQCSYVEGRVVRPVFPKPCE 473
Query: 314 ELSSSQQTG 322
L + G
Sbjct: 474 NLDIYDEQG 482
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 184/302 (60%), Gaps = 4/302 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + ++ G NGTI+GQG WW +R++ L TR L++ M S +IIISN+
Sbjct: 207 RYGSLIHGQDLKDVTVTGHNGTINGQGKSWWTKFRRKLLNHTRGPLVQLMRSSNIIISNI 266
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
Q+SPFW +H C NV I TILAP +PNTDGIDPDS NV I++ YIS GDD V
Sbjct: 267 TLQDSPFWTLHTYDCKNVTISETTILAPIVGAPNTDGIDPDSCENVMIQNCYISVGDDGV 326
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGV 194
A+KSGWD+YGIAYG PS+ ITIR VT S S G+++GSE SGGV NVL E++++++
Sbjct: 327 AIKSGWDQYGIAYGRPSTNITIRDVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWSSRR 386
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
G+ +KT GRG ++ NI ++ +EN R GI I D +HPD+ FNP A+P+V I+
Sbjct: 387 GVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEHPDEGFNPKAVPIVGNISYTS 446
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCS 313
+ G V+ IQG P + ++++ G+ +CS V G V P PC
Sbjct: 447 IHGQGVRVPVRIQGSAEIPVKNVTFHDMSV-GILDKKHHVFQCSYVQGQVIGYVFPVPCK 505
Query: 314 EL 315
L
Sbjct: 506 NL 507
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 189/309 (61%), Gaps = 4/309 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NG+I+GQG +WW R+R L TRP L++ M S+ I+++N+
Sbjct: 170 RFGSLIHGQNLKDVVITGYNGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSKDIVVTNI 229
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
+NSPFW+ HP C+NV + VTIL+P + +PNTDGIDPDS +V IE+ YIS GDD +
Sbjct: 230 TLRNSPFWHFHPYDCTNVTVSNVTILSPISGAPNTDGIDPDSCEDVLIENCYISVGDDAI 289
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGV 194
A+KSGWD+YGIAYG SS I IR VT S S GI++GSE SGGV N+ E++++++
Sbjct: 290 AIKSGWDQYGIAYGRSSSNILIRNVTVRSLVSAGISIGSEMSGGVANITVENVHIWDSRR 349
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
G+ +KT IGRGG+IRNI+ S++ +N R GI I D +H DD ++ NA P + GI+ K
Sbjct: 350 GVRIKTAIGRGGYIRNISYSNITFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKK 409
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCS 313
+ G V+ G P I ++++ G++ +CS + G V P PC
Sbjct: 410 IHGRGVRVPVRAHGSNYIPIKDITFQDMSV-GISYKKKHIFQCSYIEGRVIGSVFPKPCE 468
Query: 314 ELSSSQQTG 322
L + G
Sbjct: 469 NLDVYDEQG 477
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 181/304 (59%), Gaps = 4/304 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTI GQG WW +RQ+ L TR L++ M SR I+ISN+ ++SPFW +
Sbjct: 178 LRDVVITGHNGTISGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTL 237
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C N+ IR VTILAP D+PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 238 HPYDCKNITIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYG 297
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS I IR V S S GI++GSE SGGV + E++ ++N G+ +KT GR
Sbjct: 298 IAYGQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGR 357
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG++++IT ++ ++ R GI I D +HPD+ ++P ALPV+ I+ + G V+
Sbjct: 358 GGYVQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPV 417
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGA 323
+ G K+ P + ++++ G+ +C+ V G + P PC L +
Sbjct: 418 RMHGSKDIPVRNVTFKDMSV-GITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDERQR 476
Query: 324 CSNH 327
H
Sbjct: 477 LIKH 480
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 181/304 (59%), Gaps = 4/304 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTI GQG WW +RQ+ L TR L++ M SR I+ISN+ ++SPFW +
Sbjct: 178 LRDVVITGHNGTISGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTL 237
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C N+ +R VTILAP D+PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 238 HPYDCKNITVRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYG 297
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS I IR V S S GI++GSE SGGV + E++ ++N G+ +KT GR
Sbjct: 298 IAYGQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGR 357
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG++++IT ++ ++ R GI I D +HPD+ ++P ALPV+ I+ + G V+
Sbjct: 358 GGYVQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPV 417
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGA 323
+ G K+ P + ++++ G+ +C+ V G + P PC L +
Sbjct: 418 RMHGSKDIPVRNVTFKDMSV-GITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDERQR 476
Query: 324 CSNH 327
H
Sbjct: 477 LIKH 480
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 184/309 (59%), Gaps = 4/309 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NG+I+GQG +WW R+R L TRP L++ M S+ II++N+
Sbjct: 137 RFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANI 196
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPDSSSNVCIEDSYISTGDDLV 135
+NSPFW+ HP C+N+ + VTILAP S PNTDGIDPDS +V IE+ YIS GDD +
Sbjct: 197 TLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAI 256
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGV 194
AVKSGWD+YGIAYG PS I IR V S S GI++GSE SGG+ NV E + ++
Sbjct: 257 AVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRR 316
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
G+ +KT IGRGG+IR+I+ ++ +N R GI I D +H DD ++ +A P + I+ K+
Sbjct: 317 GLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKE 376
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCS 313
+ G V+ G + P I ++++ G++ +CS + G V P PC
Sbjct: 377 IHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIFQCSFIEGRVIGSVFPKPCE 435
Query: 314 ELSSSQQTG 322
L + G
Sbjct: 436 NLDLYNEQG 444
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 164/260 (63%), Gaps = 3/260 (1%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
TRP +IE M S I ISN+ NSP W +HP+Y S+++I+ +TILAP DSPNTDGIDPD
Sbjct: 124 LTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPD 183
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSET 175
S SN IED YI +GDD +AVKSGWDEYGI G PS I IRR+T SP S IA+GSE
Sbjct: 184 SCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGSEM 243
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGG++++ AE + N + +KT +GRG ++RNI V + + + + G G HP
Sbjct: 244 SGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGSHP 303
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 295
D F+P ALP + GI +DV V ++G+ N PFTGIC+SN N++ V +
Sbjct: 304 DTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVGKKLA--W 361
Query: 296 KCSDVSGSAYQVKPWPCSEL 315
C+DV G V P PC+ L
Sbjct: 362 NCTDVHGVTSNVSPEPCALL 381
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 188/304 (61%), Gaps = 4/304 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + G+NGTIDGQG +WW+ + +L ++RP+L+EF++S ++I+SN+
Sbjct: 134 RYMSLINGDTLHDVVVTGDNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSSGNVIVSNL 193
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F N+P + IH VYCSN+ I VT +SP T GI PDSS NVCI+DS I+ G D ++
Sbjct: 194 TFLNAPAYTIHSVYCSNLYIHRVTANTSPESPYTIGIVPDSSENVCIQDSSINMGYDAIS 253
Query: 137 VKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSGWDEYGI+Y P++ + I+ V G++ S I+ GSE SGG+ +V +++N G
Sbjct: 254 LKSGWDEYGISYARPTANVQIKNVYLGAASGSSISFGSEMSGGISDVEVRDAHIHNSLSG 313
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +T GRGG+I+ I +S+++M N G G HPD F+ NA P+V+ I + D+
Sbjct: 314 ISFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHPDSGFDANAFPLVSHIRLHDI 373
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP--LKCSDVSGSAYQVKPWPCS 313
G + +G G + SPFT I LSNI+L + SP +CS V GS+ V P PC
Sbjct: 374 AGENISTAGYFFGTEESPFTSILLSNISLS-IKNSDSPADFWQCSYVDGSSEFVVPEPCL 432
Query: 314 ELSS 317
EL S
Sbjct: 433 ELKS 436
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 185/309 (59%), Gaps = 4/309 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + G NG+I+GQG +WW R+R L TRP L++ M S+ II++N+
Sbjct: 170 RFGSLIHGQNLRDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLVQLMWSKDIIVANI 229
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
+NSPFW++HP C+NV + VTI++P + +PNTDGIDPDS +V IE+ YIS GDD +
Sbjct: 230 TLRNSPFWHLHPYDCTNVTVSNVTIMSPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAI 289
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGV 194
A+KSGWD+YGIAYG PSS I IR VT S S GI++GSE SGGV NV E++ ++
Sbjct: 290 AIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSEMSGGVANVTVENVRIWESRR 349
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
G+ +KT GRGG+IRNI+ ++ +N R GI I D +H DD ++ A P + I+ K
Sbjct: 350 GVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGYDRTAFPDITSISFKG 409
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ-VKPWPCS 313
+ G V+ G P I ++++ G++ +CS + G + V P PC
Sbjct: 410 IHGQGVRVPVRAHGSDVIPIKDISFQDMSV-GISYKKKHIFQCSYLEGRVIRPVFPKPCE 468
Query: 314 ELSSSQQTG 322
L + G
Sbjct: 469 NLDVYDEQG 477
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/309 (41%), Positives = 184/309 (59%), Gaps = 4/309 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NG+I+GQG +WW R+R L TRP L++ M S+ II++N+
Sbjct: 193 RFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANI 252
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
+NSPFW+ HP C+N+ + VTILAP + +PNTDGIDPDS +V IE+ YIS GDD +
Sbjct: 253 TLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAI 312
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGV 194
AVKSGWD+YGIAYG PS I IR V S S GI++GSE SGG+ NV E + ++
Sbjct: 313 AVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRR 372
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
G+ +KT IGRGG+I +I+ ++ +N R GI I D +H DD ++ +A P + I+ K+
Sbjct: 373 GLRIKTAIGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKE 432
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCS 313
+ G V+ G + P I ++++ G++ +CS + G V P PC
Sbjct: 433 IHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIFQCSFIEGRVIGSVFPKPCE 491
Query: 314 ELSSSQQTG 322
L + G
Sbjct: 492 NLDLYNEQG 500
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 181/292 (61%), Gaps = 4/292 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G NG+I+GQG +WW R+R L TRP L++ M S II++N+ +NSPFW+
Sbjct: 181 LKDVVITGYNGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSSDIIVTNITLRNSPFWHF 240
Query: 87 HPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C+NV + VTILAP + +PNTDGIDPDS +V IE+ YIS GDD +AVKSGWD+YG
Sbjct: 241 HPYDCTNVTVSNVTILAPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYG 300
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PSS I IR V S S GI++GSE SGGV NV E++ +++ G+ +KT GR
Sbjct: 301 IAYGRPSSNILIRNVAVRSLVSAGISIGSEMSGGVANVTVENVRIWDSRRGVRIKTATGR 360
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+IRNI+ ++ +N R GI I D +H DD ++ NA P + GI+ K++ G V+
Sbjct: 361 GGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKEIHGWGVRVPV 420
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 315
G P + ++++ G++ +CS + G V P PC L
Sbjct: 421 RAHGSNIIPIKDVTFQDMSV-GISYKKKHIFQCSYIEGRVIGSVFPKPCENL 471
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 183/299 (61%), Gaps = 4/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ I G NGTI+GQG WW +++R L +TR L++ M S I+I+N+ ++SPFW +
Sbjct: 191 LKDIVITGHNGTINGQGQSWWKKYQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTL 250
Query: 87 HPVYCSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV IR VTILAP +PNTDGIDPDS ++ IED YISTGDD +A+KSGWD++G
Sbjct: 251 HPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFG 310
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I IR + S S G+++GSE SGG+ NV E++ ++N GI +KT GR
Sbjct: 311 IAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGR 370
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+IRNIT ++ ++N R GI I D +H DD ++ A P+++G + + G V+
Sbjct: 371 GGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPV 430
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++++ G+ +CS V G + + P PC + G
Sbjct: 431 RIHGSEQIPVRNVTFRDMSV-GLTYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 179/306 (58%), Gaps = 4/306 (1%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
+ + G NGTI+GQG WW +RQ+ L TR L++ M S I+I+N+ ++SPFW
Sbjct: 175 QHLKDVVITGHNGTINGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFW 234
Query: 85 NIHPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 143
IHP C N+ I+ VTILAP +PNTDGIDPDS ++ IED YIS GDD +AVKSGWD+
Sbjct: 235 TIHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQ 294
Query: 144 YGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 202
YGI YG PS I IR + S S GI++GSE SGGV NV E++ +++ G+ +KT
Sbjct: 295 YGIDYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAP 354
Query: 203 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQ 262
GRG ++R IT ++ EN R GI + D +HPDD ++P ALP++ I+ V G V+
Sbjct: 355 GRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRV 414
Query: 263 SGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQT 321
I G + P + ++++ G+ +C+ V G + P PC L +
Sbjct: 415 PVRIHGSEEIPVRNVTFKDMSV-GLTYKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQ 473
Query: 322 GACSNH 327
G H
Sbjct: 474 GQLVKH 479
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 180/297 (60%), Gaps = 4/297 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTI+GQG WW +RQ+ L TR L++ + S +I+ISN+ ++SPFW +HP C N
Sbjct: 181 GHNGTINGQGQTWWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKN 240
Query: 94 VVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
V ++ VTILAP + +PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGI YG PS
Sbjct: 241 VTVKKVTILAPVSHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPS 300
Query: 153 SGITIRR-VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
I IR V S+ +GI++GSE SGGV NVL E+I ++ + +KT GRGG++R I
Sbjct: 301 KNIVIRNLVVRSNVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQI 360
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
T ++ ++N R GI I D +HP ++P ALP++ I+ ++ G V+ IQG +
Sbjct: 361 TYKNLMLKNVRVGIVIKTDYNEHPGAGYDPRALPILRDISFMNIRGQGVRVPVRIQGSEQ 420
Query: 272 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 327
P + ++ + G+ +C+ V G A + P PC + G H
Sbjct: 421 IPVRNVTFQDMKV-GITYKKKHIFQCAFVQGQAIGTIFPSPCDSFDRYNEQGQLVKH 476
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 182/299 (60%), Gaps = 4/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ I G NGTI+GQG WW ++R L +TR L++ M S I+I+N+ ++SPFW +
Sbjct: 218 LKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTL 277
Query: 87 HPVYCSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV IR VTILAP +PNTDGIDPDS ++ IED YISTGDD +A+KSGWD++G
Sbjct: 278 HPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFG 337
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I IR + S S G+++GSE SGG+ NV E++ ++N GI +KT GR
Sbjct: 338 IAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGR 397
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+IRNIT ++ ++N R GI I D +H DD ++ A P+++G + + G V+
Sbjct: 398 GGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPV 457
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++++ G+ +CS V G + + P PC + G
Sbjct: 458 RIHGSEQIPVRNVTFRDMSV-GLTYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 515
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 182/299 (60%), Gaps = 4/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ I G NGTI+GQG WW ++R L +TR L++ M S I+I+N+ ++SPFW +
Sbjct: 191 LKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTL 250
Query: 87 HPVYCSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV IR VTILAP +PNTDGIDPDS ++ IED YISTGDD +A+KSGWD++G
Sbjct: 251 HPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFG 310
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I IR + S S G+++GSE SGG+ NV E++ ++N GI +KT GR
Sbjct: 311 IAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGR 370
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+IRNIT ++ ++N R GI I D +H DD ++ A P+++G + + G V+
Sbjct: 371 GGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPV 430
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++++ G+ +CS V G + + P PC + G
Sbjct: 431 RIHGSEQIPVRNVTFRDMSV-GLTYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 182/299 (60%), Gaps = 4/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ I G NGTI+GQG WW ++R L +TR L++ M S I+I+N+ ++SPFW +
Sbjct: 191 LKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTL 250
Query: 87 HPVYCSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV IR VTILAP +PNTDGIDPDS ++ IED YISTGDD +A+KSGWD++G
Sbjct: 251 HPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFG 310
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I IR + S S G+++GSE SGG+ NV E++ ++N GI +KT GR
Sbjct: 311 IAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGR 370
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+IRNIT ++ ++N R GI I D +H DD ++ A P+++G + + G V+
Sbjct: 371 GGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPV 430
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++++ G+ +CS V G + + P PC + G
Sbjct: 431 RIHGSEQIPVRNVTFRDMSV-GLTYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 172/281 (61%), Gaps = 3/281 (1%)
Query: 46 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
WW+ + ++ TRP +IE M S I ISN+ NSP W +HP+Y SN+ I+ +TILAP
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
DSPNTDGIDPDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 121
Query: 166 FSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG--FIRNITVSDVYMENAR 222
S IA+GSE SGG+++V E I + + +KT +GRG ++++I V + + +
Sbjct: 122 DSAVIALGSEMSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMK 181
Query: 223 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+ G G HPD F+P ALP + GI +DV T V S ++G+ N+PFTGIC+SN+
Sbjct: 182 YVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNV 241
Query: 283 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 323
++Q C+DV+G V P C L + G
Sbjct: 242 SIQVSEQRKKLQWNCTDVAGVTSNVSPNSCQLLPEKGKLGC 282
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/314 (40%), Positives = 183/314 (58%), Gaps = 4/314 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + G NGTI+GQG WW +RQ+ L TR L++ + S +I+ISN+
Sbjct: 169 RYSSLIHGQNLRDVVITGHNGTINGQGQTWWTKYRQKLLNHTRGPLVQILWSSNIVISNI 228
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
++SPFW +HP C NV ++ VTILAP + +PNTDGIDPDS ++ IED YIS GDD +
Sbjct: 229 TLRDSPFWTLHPYDCKNVTVKNVTILAPVSHAPNTDGIDPDSCEDMLIEDCYISVGDDAI 288
Query: 136 AVKSGWDEYGIAYGHPSSGITIRR-VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 194
A+KSGWD+YGI YG PS I IR V S+ +GI++GSE SGGV NVL E+I ++
Sbjct: 289 AIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVLVENILVWESRR 348
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
+ +KT GRGG++R IT ++ +N R GI I D +HP ++P ALP++ I+ +
Sbjct: 349 AMRIKTAPGRGGYVRQITYKNLMFKNVRVGIVIKTDYNEHPGTGYDPRALPILRDISFIN 408
Query: 255 VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCS 313
+ G V+ IQG + P + ++ + G+ +C+ V G A + P PC
Sbjct: 409 IRGQGVRVPVRIQGSEQIPVRNVTFQDMKI-GITYKKKHIFQCAFVQGQAIGTIFPSPCD 467
Query: 314 ELSSSQQTGACSNH 327
+ G H
Sbjct: 468 SFDRYNEQGQLVKH 481
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 181/304 (59%), Gaps = 4/304 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G NGTI+GQG WW +RQ+ L TR L++ M S I+ISN+ ++SPFW +
Sbjct: 178 LKDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTL 237
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV I+ VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 238 HPYDCKNVTIKNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYG 297
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
+AYG PS I IR + S S G+++GSE SGGV NV E++ ++N + +KT+ GR
Sbjct: 298 VAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGR 357
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG++++I ++ +N R GI I D +HPDD F+P ALP++ I+ V G V+
Sbjct: 358 GGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPV 417
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGA 323
I G + P + ++++ G+ +C+ V G V P PC L +
Sbjct: 418 RIHGSEEIPVKKVTFRDMSV-GITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQEQ 476
Query: 324 CSNH 327
H
Sbjct: 477 LIKH 480
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 180/299 (60%), Gaps = 4/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDGQG WW +RQ+ L TR L++ M S I+ +N+ ++SPFW +
Sbjct: 180 LRDVVITGHNGTIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTL 239
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV IR VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 240 HPYDCKNVTIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 299
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I IR + S S GI++GSE SGGV NV E++ +++ + +KT GR
Sbjct: 300 IAYGRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGR 359
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG++R+IT ++ +N R GI I D +HPD+ ++P A+P++ I+ + G V+
Sbjct: 360 GGYVRHITYRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPV 419
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++++ G+ +C+ V G V P PC L + G
Sbjct: 420 RIHGSQEIPVRNVTFWDMSV-GLTYKKKHIFQCAFVQGRVIGTVFPAPCENLDRYDEQG 477
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 179/292 (61%), Gaps = 4/292 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G NGTI+GQG WW +R++ L TR L++ M S +IIISN+ ++SPFW +
Sbjct: 215 LKDVIITGHNGTINGQGQSWWIKFRKKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTL 274
Query: 87 HPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
H C NV I TILAP +PNTDGIDPDS NV IE+ YIS GDD VA+KSGWD+YG
Sbjct: 275 HVYDCKNVTISGTTILAPIVGAPNTDGIDPDSCENVMIENCYISVGDDGVAIKSGWDQYG 334
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ ITIR V S S G+++GSE SGGV NVL E++++++ G+ +KT GR
Sbjct: 335 IAYGRPSTNITIRNVIIRSMVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGR 394
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
G ++ NI ++ +EN R GI I D +HPD+ F+P A+PV I+ + G +V+
Sbjct: 395 GAYVNNIVYRNITLENVRVGIVIKTDYNEHPDELFDPKAVPVGGNISYTSIHGQRVRVPV 454
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 315
IQG P + ++++ G+ +CS V G V P PC L
Sbjct: 455 RIQGSAEIPVRNVTFHDMSV-GILDKKHHVFQCSFVQGQVIGYVFPVPCKNL 505
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 181/299 (60%), Gaps = 4/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G NGTI+GQG WW +RQ+ L TR L++ M S I+I+N+ ++SPFW +
Sbjct: 179 LKDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTL 238
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV IR VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 239 HPYDCKNVTIRNVTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYG 298
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAY PS+ I IR + S S GI++GSE SGGV N+ E++ +++ + +KT GR
Sbjct: 299 IAYRRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGR 358
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG++R+IT ++ +N R GI I D +HPD+ ++P A+PV+ I+ V G V+
Sbjct: 359 GGYVRHITYRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPV 418
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++++ G+ +C+ V G + P PC L + G
Sbjct: 419 RIHGSEEIPVRNVTFQDMSV-GLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQG 476
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 179/292 (61%), Gaps = 4/292 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ ++ G NGTI+GQG WW +R++ L TR L++ M S IIISN+ ++SPFW +
Sbjct: 203 LKDVTITGHNGTINGQGQSWWVKFRRKLLNHTRGPLVQLMRSSDIIISNITLRDSPFWTL 262
Query: 87 HPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
H C NV I TILAP A +PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YG
Sbjct: 263 HTYDCKNVTISETTILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYG 322
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I I+ V S S G+++GSE SGGV +VL E++++++ G+ +KT GR
Sbjct: 323 IAYGRPSANIVIQNVVIRSMVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGR 382
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
G ++ NI ++ +EN R GI I D +HPD+ F+P A+P + I+ + G +V+
Sbjct: 383 GAYVTNIVYRNITLENVRVGIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPV 442
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 315
IQG P + ++++ G+ +CS V G V P PC L
Sbjct: 443 RIQGSAEIPVKNVTFHDMSI-GIVDKKHHVFQCSFVQGQVIGYVFPVPCKNL 493
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 180/292 (61%), Gaps = 4/292 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ ++ G NGTI+GQG WW +R++ L TR L++ M S +IIISN+ ++SPFW +
Sbjct: 201 LKHVTITGHNGTINGQGQSWWVKFRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTL 260
Query: 87 HPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
H C NV I TILAP A +PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YG
Sbjct: 261 HTYDCKNVTISETTILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYG 320
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ ITI+ V S S G+++GSE SGGV +VL E++++++ G+ +KT GR
Sbjct: 321 IAYGRPSANITIQNVVIRSMVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGR 380
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
G ++ N+ ++ EN R GI I D +HPD+ F+P A+P + I+ + G +V+
Sbjct: 381 GAYVTNVIYQNITFENVRVGIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPV 440
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 315
IQG P + ++++ G+ +CS V G V P PC L
Sbjct: 441 RIQGSAQIPVKNVTFHDMSI-GIVDKKHHVFQCSFVQGQVIGYVFPVPCKNL 491
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 175/299 (58%), Gaps = 4/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G NGTI+GQG WW + L +TR L++ M S I+ISN+ ++SPFW +
Sbjct: 159 LKDVVITGHNGTINGQGQTWWTKHLHKLLNYTRGPLVQIMYSSDIVISNITLRDSPFWTL 218
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV I+ VTILAP +PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 219 HPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYG 278
Query: 146 IAYGHPSSGITIRR-VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAY PS I IR V S+ +GI++GSE SGGV NV E+I ++ I +KT GR
Sbjct: 279 IAYAKPSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTIENILVWESRRAIRIKTAPGR 338
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG++R IT ++ N R GI I D +HPDD ++P ALP++ I+ ++ G V+
Sbjct: 339 GGYVRQITYRNITFHNVRVGIVIKTDYNEHPDDGYDPTALPILRDISFTNIRGEGVRVPV 398
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++N+ G+ +C+ V G + P PC + G
Sbjct: 399 RITGSEEIPVRNVTFHDMNV-GITYKKKHIFQCAFVEGRVIGTIFPKPCRNFDQYNEQG 456
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 177/299 (59%), Gaps = 4/299 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
I G NGTIDGQG WW +RQ+ L TR L++ M S I+ N+ +NSPFW +
Sbjct: 180 LRDIVITGHNGTIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTL 239
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV IR VTILAP ++PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 240 HPYDCKNVTIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 299
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I IR + S S GI++GSE SGGV +V E++ +++ + +KT GR
Sbjct: 300 IAYGRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGR 359
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
G ++RNIT ++ ++ R GI I D +HPD+ ++P A+P + I+ + G V+
Sbjct: 360 GAYVRNITYRNLTFDDVRVGIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPV 419
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 322
I G + P + ++++ G+ +C+ V G + P PC L + G
Sbjct: 420 RIHGSEEIPVRNVTFQDMSV-GLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQG 477
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 185/304 (60%), Gaps = 4/304 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + G+NGTIDGQG +WW+ + +L ++RP+L+EF+++ ++I+SN+
Sbjct: 134 RYMSLINGDMLHDVVVTGDNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNL 193
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F N+P + IH VYC N+ I VT +SP T GI PDSS NVCI++S I+ G D ++
Sbjct: 194 TFLNAPAYTIHSVYCRNLYIHRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAIS 253
Query: 137 VKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSG DEYG++Y P++ + IR V ++ S I+ GSE SGG+ +V +++N G
Sbjct: 254 LKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSG 313
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +T GRGG+I+ I +S+++M N G G HPD F+ NA P+V+ I + D+
Sbjct: 314 IAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDI 373
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP--LKCSDVSGSAYQVKPWPCS 313
G + +G G K SPFT I LSNI+L + SP +CS V GS+ V P PC
Sbjct: 374 VGENISTAGYFFGTKESPFTSILLSNISLS-IKNSASPADSWQCSYVDGSSEFVVPEPCL 432
Query: 314 ELSS 317
EL S
Sbjct: 433 ELKS 436
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 182/292 (62%), Gaps = 4/292 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ ++ G+NGTI+GQG WW+ +R++ L TR L++ M S +I ISN+ ++SPFW +
Sbjct: 111 LKDVTITGQNGTINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTL 170
Query: 87 HPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
H C +V I TILAP +PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YG
Sbjct: 171 HIYDCKDVTISDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYG 230
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I I VT S S G+++GSE SGGV NVL E++++++ G+ +KT GR
Sbjct: 231 IAYGRPSTNIIIHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGR 290
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
G ++ NIT ++ +E+ R GI I D +HPD+ F+P A+P++ I+ + G V+
Sbjct: 291 GAYVSNITYRNITLEHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPV 350
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 315
IQG P + ++++ G+ + +CS V G V P PC L
Sbjct: 351 RIQGSAEIPVKNVTFHDMSV-GLVDRKNHVFQCSFVQGQVIGYVFPVPCKNL 401
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 185/304 (60%), Gaps = 4/304 (1%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + G+NGTIDGQG +WW+ + +L ++RP+L+EF+++ ++I+SN+
Sbjct: 136 RYMSLINGDMLHDVVVTGDNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNL 195
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F N+P + IH VYC N+ I VT +SP T GI PDSS NVCI++S I+ G D ++
Sbjct: 196 TFLNAPAYTIHSVYCRNLYIHRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAIS 255
Query: 137 VKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+KSG DEYG++Y P++ + IR V ++ S I+ GSE SGG+ +V +++N G
Sbjct: 256 LKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSG 315
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +T GRGG+I+ I +S+++M N G G HPD F+ NA P+V+ I + D+
Sbjct: 316 IAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDI 375
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP--LKCSDVSGSAYQVKPWPCS 313
G + +G G K SPFT I LSNI+L + SP +CS V GS+ V P PC
Sbjct: 376 VGENISTAGYFFGTKESPFTSILLSNISLS-IKNSASPADSWQCSYVDGSSEFVVPEPCL 434
Query: 314 ELSS 317
EL S
Sbjct: 435 ELKS 438
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 188/291 (64%), Gaps = 4/291 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G+NGTIDGQG +WW+ + +L + RP+LIEF++S+++I+SN+ F N+P + I
Sbjct: 146 LHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSKNVIVSNLTFLNAPAYTI 205
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
H +Y S+V I + + +SP T GI PDSS+ VCI++S I+ G D +++KSGWDEYGI
Sbjct: 206 HSIYSSHVYIHKILAHSSPESPYTIGIVPDSSNYVCIQNSTINVGYDAISLKSGWDEYGI 265
Query: 147 AYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
AY P+ + IR V G+S S I+ GSE SGG+ +V+ ++ +++N GI +T GR
Sbjct: 266 AYSRPTENVHIRNVYLRGASG-SSISFGSEMSGGISDVVVDNAHMHNSLTGIAFRTTKGR 324
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG+I+ I +S++ M I G G HPDDK++ NALP+V+ I + ++ G + +G
Sbjct: 325 GGYIKEIDISNIDMSRIGTAIVANGSFGSHPDDKYDANALPLVSHIRLSNISGENIGIAG 384
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
+ G+K SPF+ + LSNI L +G +S +CS V GS+ V P PC EL
Sbjct: 385 KLFGIKESPFSAVALSNIALSTSSG-SSVSWQCSYVYGSSESVIPEPCPEL 434
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 182/292 (62%), Gaps = 4/292 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ ++ G+NGTI+GQG WW+ +R++ L TR L++ M S +I ISN+ ++SPFW +
Sbjct: 211 LKDVTITGQNGTINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTL 270
Query: 87 HPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
H C +V I TILAP +PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YG
Sbjct: 271 HIYDCKDVTISDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYG 330
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I I VT S S G+++GSE SGGV NVL E++++++ G+ +KT GR
Sbjct: 331 IAYGRPSTNIIIHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGR 390
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
G ++ NIT ++ +E+ R GI I D +HPD+ F+P A+P++ I+ + G V+
Sbjct: 391 GAYVSNITYRNITLEHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPV 450
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 315
IQG P + ++++ G+ + +CS V G V P PC L
Sbjct: 451 RIQGSAEIPVKNVTFHDMSV-GLVDRKNHVFQCSFVQGQVIGYVFPVPCKNL 501
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 182/292 (62%), Gaps = 4/292 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ ++ G+NGTI+GQG WW+ +R++ L TR L++ M S +I ISN+ ++SPFW +
Sbjct: 211 LKDVTITGQNGTINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTL 270
Query: 87 HPVYCSNVVIRYVTILAP-ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
H C +V I TILAP +PNTDGIDPDS NV I++ YIS GDD +A+KSGWD+YG
Sbjct: 271 HIYDCKDVTISDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYG 330
Query: 146 IAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS+ I I VT S S G+++GSE SGGV NVL E++++++ G+ +KT GR
Sbjct: 331 IAYGRPSTNIIIHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGR 390
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
G ++ NIT ++ +E+ R GI I D +HPD+ F+P A+P++ I+ + G V+
Sbjct: 391 GAYVSNITYRNITLEHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPV 450
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 315
IQG P + ++++ G+ + +CS V G V P PC L
Sbjct: 451 RIQGSAEIPVKNVTFHDMSV-GLVDRRNHVFQCSFVQGQVIGYVFPVPCRNL 501
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 175/290 (60%), Gaps = 4/290 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG+I+GQG WW +RQ+ L TR L++ M S I+ +N+ ++SPFW +HP C N
Sbjct: 179 GNNGSINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKN 238
Query: 94 VVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
V I +TILAP ++PNTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS
Sbjct: 239 VTITNMTILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPS 298
Query: 153 SGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
I IR + S S GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+I
Sbjct: 299 KNILIRNLIIRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDI 358
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
T +V ++ R GI I D +HPD FNP A P++ I ++G V+ IQG K
Sbjct: 359 TFRNVTLDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKE 418
Query: 272 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 320
P + ++++ G+ +C+ V G + P PC L +
Sbjct: 419 IPVKNVTFRDMSV-GITYKKKHIFQCAYVEGRVIGTIFPAPCENLDRYDE 467
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 175/290 (60%), Gaps = 4/290 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG+I+GQG WW +RQ+ L TR L++ M S I+ +N+ ++SPFW +HP C N
Sbjct: 176 GNNGSINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKN 235
Query: 94 VVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
V I +TILAP ++PNTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS
Sbjct: 236 VTITNMTILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPS 295
Query: 153 SGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
I IR + S S GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+I
Sbjct: 296 KNILIRNLIIRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDI 355
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
T +V ++ R GI I D +HPD FNP A P++ I ++G V+ IQG K
Sbjct: 356 TFRNVTLDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKE 415
Query: 272 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 320
P + ++++ G+ +C+ V G + P PC L +
Sbjct: 416 IPVKNVTFRDMSV-GITYKKKHIFQCAYVEGRVIGTIFPAPCDNLDRYDE 464
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 177/304 (58%), Gaps = 4/304 (1%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTI+GQG WW +R++ L TR L++ M S I+I+N+ ++SPFW +
Sbjct: 167 LRDVVITGHNGTINGQGQSWWTKYREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTL 226
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
HP C NV I+ VTILAP +PNTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG
Sbjct: 227 HPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYG 286
Query: 146 IAYGHPSSGITIRR-VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
IAYG PS I IR V S+ +GI++GSE SGGV NV E++ ++ I +KT GR
Sbjct: 287 IAYGKPSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGR 346
Query: 205 GGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG 264
GG++R IT ++ N R GI I + +HPD ++P A PV++ I+ +V G V+
Sbjct: 347 GGYMRQITYRNLTFNNVRVGIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRVPV 406
Query: 265 LIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGA 323
I+G K + ++N+ G+ +C+ V G + P PC + G
Sbjct: 407 RIEGSKEISVRNVTFQDMNV-GITYKKKHIFQCAFVEGRVIGTIFPAPCGNFDQYNEQGE 465
Query: 324 CSNH 327
H
Sbjct: 466 LVKH 469
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 174/290 (60%), Gaps = 4/290 (1%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NG+I+GQG WW +RQ+ L TR L + M S I+ +N+ ++SPFW +HP C N
Sbjct: 176 GNNGSINGQGQTWWKKYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKN 235
Query: 94 VVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
V I +TILAP ++PNTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS
Sbjct: 236 VTITNMTILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPS 295
Query: 153 SGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
I IR + S S GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+I
Sbjct: 296 KNILIRNLIIRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDI 355
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
T +V ++ R GI I D +HPD FNP A P++ I ++G V+ IQG K
Sbjct: 356 TFRNVTLDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKE 415
Query: 272 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 320
P + ++++ G+ +C+ V G + P PC L +
Sbjct: 416 IPVKNVTFRDMSV-GITYKKKHIFQCAYVEGRVIGTIFPAPCDNLDRYDE 464
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 181/320 (56%), Gaps = 20/320 (6%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ + G NGTI+GQG WW +RQ+ L TR L++ M S I+ISN+ ++SPFW +
Sbjct: 178 LKDVVVTGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTL 237
Query: 87 HPVYCSNVVIRYVTILAPA-DSPNTDGIDP----------------DSSSNVCIEDSYIS 129
HP C NV I+ VTILAP ++PNTDGIDP +S ++ IED YIS
Sbjct: 238 HPYDCKNVTIKNVTILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYIS 297
Query: 130 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHIN 188
GDD +A+KSGWD+YG+AYG PS I IR + S S G+++GSE SGGV NV E++
Sbjct: 298 VGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLL 357
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 248
++N + +KT+ GRGG++++I ++ +N R GI I D +HPDD F+P ALP++
Sbjct: 358 VWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILE 417
Query: 249 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QV 307
I+ V G V+ I G + P + ++++ G+ +C+ V G V
Sbjct: 418 DISFTGVHGQGVRVPVRIHGSEEIPVKKVTFRDMSV-GITYKKKHIFQCAYVEGRVIGTV 476
Query: 308 KPWPCSELSSSQQTGACSNH 327
P PC L + H
Sbjct: 477 FPAPCENLDRYDEQEQLXKH 496
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 187/292 (64%), Gaps = 4/292 (1%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
K + G+NGTIDGQG +WW+ + +L + RP+LIEF++S ++I+SN+ F N+P ++
Sbjct: 145 KLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYS 204
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+ +Y S+V I + + SP T GI PDSS VCI++S I+ G D +++KSGWDEYG
Sbjct: 205 IYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYG 264
Query: 146 IAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
IAY P+ + IR V G+S S I+ GSE SGG+ +V+ ++ +++ GI +T G
Sbjct: 265 IAYSRPTENVHIRNVYLRGASG-SSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKG 323
Query: 204 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
RGG+I+ I +S++ M I G G HPDDK++ NALP+V+ I + ++ G + +
Sbjct: 324 RGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIA 383
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + G+K SPF+ + LSN++L +G +S +CS V GS+ V P PC EL
Sbjct: 384 GKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEPCPEL 434
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 166/300 (55%), Gaps = 48/300 (16%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + GENGTIDGQGA+WW + + L +TRP LIE M+S ++ IS++
Sbjct: 146 RYISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSL 205
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WN+HPVY SNV+I+ +TI AP SPNTDGI+PDS +N IED YI +GDD +A
Sbjct: 206 TLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIA 265
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVG 195
VKSGWDEYGIAYG P+ + IRR+T SPFS IA+GSE SGG+E+V AE I + G
Sbjct: 266 VKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESG 325
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+ +KT I D+ EN
Sbjct: 326 VRIKT--------AGINYRDMVAEN----------------------------------- 342
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
V +G ++G+ PFTGIC+SN+ + P C+D++G V P PC L
Sbjct: 343 ----VTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLL 398
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 187/292 (64%), Gaps = 4/292 (1%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
K + G+NGTIDGQG +WW+ + +L + RP+LIEF++S ++I+SN+ F N+P ++
Sbjct: 76 KLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYS 135
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+ +Y S+V I + + SP T GI PDSS VCI++S I+ G D +++KSGWDEYG
Sbjct: 136 IYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYG 195
Query: 146 IAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
IAY P+ + IR V G+S S I+ GSE SGG+ +V+ ++ +++ GI +T G
Sbjct: 196 IAYSRPTENVHIRNVYLRGASG-SSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKG 254
Query: 204 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
RGG+I+ I +S++ M I G G HPDDK++ NALP+V+ I + ++ G + +
Sbjct: 255 RGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIA 314
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + G+K SPF+ + LSN++L +G +S +CS V GS+ V P PC EL
Sbjct: 315 GKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEPCPEL 365
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 187/292 (64%), Gaps = 4/292 (1%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
K + G+NGTIDGQG +WW+ + +L + RP+LIEF++S ++I+SN+ F N+P ++
Sbjct: 76 KLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYS 135
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+ +Y S+V I + + SP T GI PDSS VCI++S I+ G D +++KSGWDEYG
Sbjct: 136 IYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYG 195
Query: 146 IAYGHPSSGITIRRV--TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
IAY P+ + IR V G+S S I+ GSE SGG+ +V+ ++ +++ GI +T G
Sbjct: 196 IAYSRPTENVHIRNVYLRGASG-SSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKG 254
Query: 204 RGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
RGG+I+ I +S++ M I G G HPDDK++ NALP+V+ I + ++ G + +
Sbjct: 255 RGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIA 314
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G + G+K SPF+ + LSN++L +G +S +CS V GS+ V P PC EL
Sbjct: 315 GKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEPCPEL 365
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 178/308 (57%), Gaps = 6/308 (1%)
Query: 12 SNAIFRFLSDFLISKFEKISFIGENG--TIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSR 69
+ +IFR+ S + + +NG IDG G WW R L +TR +L+E M +
Sbjct: 142 TESIFRYSSLVHGENLDDVVITSDNGQGVIDGNGMGWWAAHRASNLTYTRGHLVELMYTT 201
Query: 70 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 129
I++ NV +NSPFW IHP +NV++ VTI P DSPNTDG DPDS + V I++ +
Sbjct: 202 DIMLVNVELRNSPFWTIHPYSSTNVLVSNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFT 261
Query: 130 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHIN 188
GDD +AVKSGWD GI YG P++ + IR +T +P S IA+GSE SGGV N+LA+ I
Sbjct: 262 VGDDCIAVKSGWDNPGIQYGVPTTDVVIRNMTMHTPTSAAIAIGSEMSGGVSNLLAQDIR 321
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 248
+N GI +K+ GRGG++RN+T V + + + + I G H ++P A+P+++
Sbjct: 322 AFNCSSGIRLKSARGRGGYLRNLTFDGVTLNDVKTALSINDFYGQHESIFYDPLAVPIID 381
Query: 249 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 308
I + ++ GT + G QGL ++ T + +SN++L V S CS +G+ + V
Sbjct: 382 SIFMSNIVGTAITIPGDFQGLFDAKITNVAISNVSLAVVG---SGSYTCSYATGTQHAVV 438
Query: 309 PWPCSELS 316
P C +
Sbjct: 439 PVLCDAFA 446
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 163/268 (60%), Gaps = 4/268 (1%)
Query: 58 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPD 116
TRP L++ M S+ II++N+ +NSPFW+ HP C+N+ + VTILAP S PNTDGIDPD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSET 175
S +V IE+ YIS GDD +AVKSGWD+YGIAYG PS I IR V S S GI++GSE
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGG+ NV E + ++ G+ +KT IGRGG+IR+I+ ++ +N R GI I D +H
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 295
DD ++ +A P + I+ K++ G V+ G + P I ++++ G++
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIF 239
Query: 296 KCSDVSGSAY-QVKPWPCSELSSSQQTG 322
+CS + G V P PC L + G
Sbjct: 240 QCSFIEGRVIGSVFPKPCENLDLYNEQG 267
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 157/260 (60%), Gaps = 4/260 (1%)
Query: 66 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPDSSSNVCIE 124
M S+ II++N+ +NSPFW+ HP C+N+ + VTILAP S PNTDGIDPDS +V IE
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 125 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVL 183
+ YIS GDD +AVKSGWD+YGIAYG PS I IR V S S GI++GSE SGG+ NV
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVT 120
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 243
E + ++ G+ +KT IGRGG+IR+I+ ++ +N R GI I D +H DD ++ +A
Sbjct: 121 VEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDA 180
Query: 244 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS 303
P + I+ K++ G V+ G + P I ++++ G++ +CS + G
Sbjct: 181 FPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIFQCSFIEGR 239
Query: 304 AY-QVKPWPCSELSSSQQTG 322
V P PC L + G
Sbjct: 240 VIGSVFPKPCENLDLYNEQG 259
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 157/303 (51%), Gaps = 52/303 (17%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTI+GQG WW+ ++++ TRP LIE + S++I ISN+
Sbjct: 139 RFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNI 198
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+SP WNIHPVYC++V+++ VT+LAP PNTDGI+PDS +N IED YI +GDD +A
Sbjct: 199 TLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIA 258
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSGWD+YGI AVG
Sbjct: 259 VKSGWDQYGIK---------------------TAVG------------------------ 273
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
RG ++++I + M+ + ++G+ G HPD+ F+P ALP + I +D+
Sbjct: 274 -------RGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMT 326
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 316
V S + G+ PFTGIC+SN+ + A C+DV+G +V P PCS L
Sbjct: 327 AENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLP 386
Query: 317 SSQ 319
+
Sbjct: 387 EKK 389
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 161/280 (57%), Gaps = 6/280 (2%)
Query: 46 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
WW+ + ++ L TRPNLIE + S + I+ + +SP WN+HP+Y NV+I+ +TI+AP
Sbjct: 160 WWDKFHEKRLNATRPNLIEIVFSYQVQITXTLI-DSPSWNVHPIYSRNVIIQGLTIIAPV 218
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
PNTDGI+PDS +N+ +ED YI +GDD +AVKS +E G+ G P+ G+ IRR+T SP
Sbjct: 219 TVPNTDGINPDSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCISP 278
Query: 166 FSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
S IA+G E +G + NV AE I + GI +KT + RGG++++I V + M+ R
Sbjct: 279 HSAVIALGREMAGXM-NVRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTMKTMRFA 337
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
I GD G P + PV+ GI +D+ V + G+ PFTG C+SN+ +
Sbjct: 338 FWIIGDYGPPPAPG---HEGPVIEGINYRDMVADNVTYPAQLHGISGGPFTGFCISNVTI 394
Query: 285 QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 324
C +V G +V P PC LS S++ C
Sbjct: 395 GLTEESRKQQWDCDEVQGITSRVTPQPCDLLSPSKEILNC 434
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 152/284 (53%), Gaps = 38/284 (13%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G NGTIDGQGA WW+ + + +RP LI+ M + + ISN+ NSP W++HPVYCSN
Sbjct: 168 GNNGTIDGQGAPWWDKFEKGLFKASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSN 227
Query: 94 VVIRYVTILAPADSPNTDGIDPD----SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 149
V+++ VTI+AP + PNTDGI+P SS + + IST D
Sbjct: 228 VLVQGVTIIAPVEVPNTDGINPSRFLASSFHQYLNFPLISTSD----------------- 270
Query: 150 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
+GIA+GSE SGG+ENV E I + + +KT GRGG+++
Sbjct: 271 -----------------AGIALGSEMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVK 313
Query: 210 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 269
+I V + ++ + I+G+ HPDD F+PNAL + I +D+ V SG G
Sbjct: 314 DIFVRRMTLQTMKYVFWISGNYKTHPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGF 373
Query: 270 KNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCS 313
+ FTGIC+SN+ +Q P P CS+V G + V P PCS
Sbjct: 374 PTNHFTGICMSNVTIQLSQTPKKPQWNCSNVEGVSSHVTPTPCS 417
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 168/301 (55%), Gaps = 11/301 (3%)
Query: 18 FLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVI 77
FL F ++ G NGTI+ G IWW T +TR +L E M SR + +S++
Sbjct: 168 FLHGF---NLTDVTVTGNNGTINATGDIWWARHNNGTEVYTRGHLYEVMWSRQLEVSHLT 224
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SPFW +HPVY + +TIL P SPNTDG+DPDS+ +V I D Y STGDD VA+
Sbjct: 225 LTHSPFWTVHPVYSQDFRAIDLTILNPPYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAI 284
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
KSGWD YG S+ ITI SP +GI +GSE SGG+ NV A +I + G
Sbjct: 285 KSGWDVYGYTVNISSNNITIENCVFHSPNAAGICLGSEMSGGIANVFARNITMTGCLQGF 344
Query: 197 HVKTNIGRGGFIRNITVSDVYMENA-RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+KT +GRGG++ N+TV DV +EN+ + + G G HP +NP A P V I++ +
Sbjct: 345 RIKTGMGRGGYVVNVTVEDVVIENSIQLAVGYNGHYGGHP-AGYNPLATPHVYNISLINA 403
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
G Q + GL NS F + N+++ G G T CSD+SG+A V P C L
Sbjct: 404 RGGNNTQIAELVGLPNSQFRALRFQNVHITGKQGWT-----CSDISGTAQNVTPAACPSL 458
Query: 316 S 316
+
Sbjct: 459 A 459
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 132/202 (65%), Gaps = 10/202 (4%)
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSE 174
DSS + CIED I+ G D +A+KSGWDEYGIAYG P++ + IRRV SS S +A GSE
Sbjct: 51 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 110
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
SGG+ NV E ++LYN GI +T GRGG+I+ I +SDV MEN G +G H
Sbjct: 111 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 170
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 294
PDD F+PNALPV++ IT+++V GT + +G G++ SPFT ICLSNI+L T+PP
Sbjct: 171 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLS-----TTPP 225
Query: 295 LK----CSDVSGSAYQVKPWPC 312
CS+VSG + V P PC
Sbjct: 226 ASISWVCSNVSGFSQWVFPEPC 247
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 168
TDGI+PDS +NV IED YI +GDD VAVKSGWDEYGIA+G P+ + IRR+T SP+S
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 169 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 228
IA+GSE SGG+ +V AE I N GI +KT +GRG +I++I V + M + K+
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
GD HPD+K++PNALPV+ I +D+ V + G+ FTGIC++N+ L A
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 289 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 324
P C+DV G V P PC L ++ AC
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISAC 218
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
+ + G NGT++GQG WW+ +R + TRP LIE M S + ISN+ +SP W
Sbjct: 153 TNLTDVVITGGNGTLNGQGKYWWDKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSW 212
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
N+HPVY NV+++ +TILAP DSPNTDGI+PDS V IED +I +GDD +AVKSGWD+Y
Sbjct: 213 NVHPVYSRNVLVKDLTILAPIDSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQY 272
Query: 145 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
G +G P+ + IRR+T SP S IA+GSE SGG++NV AE I + GI +KT IG
Sbjct: 273 GYKFGMPTKDLLIRRLTCISPDSATIALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIG 332
Query: 204 RGGFI 208
RGG+I
Sbjct: 333 RGGYI 337
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 123/179 (68%), Gaps = 1/179 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S S + G NGTIDGQGA+WW+ + + L +TR LIE M+S +I ISN+
Sbjct: 147 RFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNL 206
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NSP WNIHPVY SN+V++ +TILAP +SPNTDGI+PDS S+V IED YI +GDD VA
Sbjct: 207 TLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVA 266
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGV 194
+KSGWDEYGI+YG PS I IRR+T SP S IA+GSE SGG + + + GV
Sbjct: 267 IKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGGVRAAPDDAHHHEAGV 325
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
S + G+NGTI+G+G +WW+ + + L F R +L+E + S +IIISNV F N+P+W
Sbjct: 56 SNLTDVIITGKNGTINGKGQVWWDKFHAKELKFIRGHLLELLYSENIIISNVTFVNAPYW 115
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
N+HP YC+NV I VTILAP +SPNTDGIDP SSS V IED YI +GDD VAVKSGWDEY
Sbjct: 116 NLHPTYCTNVTISGVTILAPVNSPNTDGIDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEY 175
Query: 145 GIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKT 200
GI + PS I I+R+T SP S IA+ SE SGG+ +V A+ N I VKT
Sbjct: 176 GIRFNMPSQHIVIQRLTSVSPTSAMIALSSEMSGGIRDVRAKDSVAINTESAIRVKT 232
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 1/213 (0%)
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 168
TDG+DPDS +N IED +I +GDD VAVKSGWDEYGI+YG P+ + IRR+T SP+S
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 169 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 228
IA+GSE SGG+E+V AE I N GI +KT +GRGG++++I V + M + +
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
G+ G HPD ++P A P++ GI +D+ V ++G+ +PFTGIC+SN +
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 289 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 321
P CSD+ G V P PC L + T
Sbjct: 181 ESKKEPWTCSDIHGITSGVTPQPCGMLPAETTT 213
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 131/206 (63%), Gaps = 1/206 (0%)
Query: 111 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-I 169
DGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T SP S I
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 170 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 229
A+GSE SGG+E+V AE I N G+ +KT IGRGG++++I V + M + + G
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
+ G H D+ ++PNALP++ I +D+ V + ++G+ PFTGIC+SN+ +
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 180
Query: 290 PTSPPLKCSDVSGSAYQVKPWPCSEL 315
P C+D+SG + V P PC+ L
Sbjct: 181 PKKLQWNCTDISGISSSVVPQPCNAL 206
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 3/201 (1%)
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSE 174
DSS+NVCIED YI +GDDLVAVKSGWD+YG+A PSS I IRR++G++ SG+ +GSE
Sbjct: 251 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSE 310
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
SGG+ N+ E I++++ G+ +KT+ GRGG+I NIT ++V +E + I+ + DH
Sbjct: 311 MSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDH 370
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 294
DDK++P ALP V GI I +V +++ ++ G++ + F +CL N+ L G+ P +
Sbjct: 371 SDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGL--PKTEK 428
Query: 295 LKCSDVSGSAYQVKPWPCSEL 315
KC DVSG A V P C +L
Sbjct: 429 WKCKDVSGYASDVFPLSCPQL 449
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 157/303 (51%), Gaps = 33/303 (10%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G IDGQG WW+ R +TR +L+EFM S I + N+ QNSPFW H C +V +
Sbjct: 131 GIIDGQGRYWWDRRRHNRDRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHV 190
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
+ V + AP SPNTDG DPDSS NV IEDS GDD VA+KSGWD +GI Y PS IT
Sbjct: 191 QNVHVKAPWSSPNTDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENIT 250
Query: 157 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 216
IR VT P++GIA+G+E SGGV NV E++ ++KT RGG++ ++ V
Sbjct: 251 IRNVTCQGPYAGIAIGTEMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDV----V 306
Query: 217 YMENARKGIKIAG--DVGDHPD-------------DKFNPNALPVVNGITIKDVWGTKV- 260
Y + I+I G D H D + + PN LP + + + GT+
Sbjct: 307 Y-----QNIRITGHIDQAIHVDMYHYHNTPNPSCSNNYQPNQLPHLRDLYFFNFEGTQAL 361
Query: 261 ---QQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ--VKPW-PCSE 314
+ GL SP + L NI+ +S CS+V GS V PW PC E
Sbjct: 362 TESHEVFHFVGLPESPIEYVFLENISFPTPV--SSLGWNCSNVQGSVKNNSVTPWPPCPE 419
Query: 315 LSS 317
S
Sbjct: 420 FPS 422
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 139/212 (65%), Gaps = 5/212 (2%)
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGS 173
PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SGIA GS
Sbjct: 10 PDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGS 69
Query: 174 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 233
E SGG+ V A + + N GI +KT GRGG++ N+ ++DV M+N I+I G+ G+
Sbjct: 70 EMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGE 129
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 293
HPDDK++ ALPV++ ITIKDV G + +G+++G++ F+ ICLSN++L + ++
Sbjct: 130 HPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---SVQSAH 186
Query: 294 PLKCSDVSGSAYQVKPWPCSEL-SSSQQTGAC 324
P CS + G + V P C +L S+ +QT C
Sbjct: 187 PWNCSLIEGYSNSVIPESCEQLRSNCRQTSIC 218
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 157/312 (50%), Gaps = 34/312 (10%)
Query: 6 MILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLP-FTRPNLIE 64
M+ + S RF S S + G+ GTI+GQG WW +R RP LIE
Sbjct: 131 MLQVLPSYRDTRFASLIYGSNLTDVVIAGDKGTINGQGKSWWAKYRNGGFKSIQRPMLIE 190
Query: 65 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 124
+S ++ ISN+ +SP W+IHPVYC NV+I+ V I P DS NTDGI+P
Sbjct: 191 IQSSENVQISNINLIDSPMWSIHPVYCRNVIIKGVKISNPIDSANTDGINP--------- 241
Query: 125 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETSGGVENVL 183
G P + IRR + +P +GIA+GSE SGG++ V
Sbjct: 242 -----------------------VGRPIEMLLIRRFSCIAPNGAGIAMGSEMSGGIKGVR 278
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 243
E + L+N I ++T +GRGG+++N+ ++ ++ + G P D P A
Sbjct: 279 MEDVTLHNTQSAIKIETAMGRGGYVQNVWARRFTIKTSKYVFLMTGSHKPIPRDGNIPKA 338
Query: 244 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS 303
PVV I +D+ G V S ++G+K++PFTG+C+SN+++ + C D+ G
Sbjct: 339 KPVVTNINFRDITGENVSTSAKLEGMKSNPFTGVCMSNVSISLSPNASKQQFHCMDIVGE 398
Query: 304 AYQVKPWPCSEL 315
+ VKP PCS L
Sbjct: 399 SRSVKPQPCSLL 410
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 109/138 (78%)
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 183
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 243
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 244 LPVVNGITIKDVWGTKVQ 261
LPVV I + DV G+ ++
Sbjct: 121 LPVVGDIAVLDVVGSSIK 138
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 118/170 (69%), Gaps = 1/170 (0%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + G+NG IDGQG++WW++ +L ++RP++IE + S +IIISN+
Sbjct: 17 RYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNL 76
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
F NSP W+IHPVYCSN+ I+ +T+ AP P T GI PDSS +VCI++ ISTG D +
Sbjct: 77 TFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIV 136
Query: 137 VKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAE 185
+KSGWDEYG+AYG P+S + IR V SS +G+A GSE SGG+ +++AE
Sbjct: 137 LKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGISDIIAE 186
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%)
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 183
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 243
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 244 LPVVNGITIKDVWGTKVQ 261
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%)
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 183
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 243
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 244 LPVVNGITIKDVWGTKVQ 261
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 151/290 (52%), Gaps = 26/290 (8%)
Query: 18 FLSDFLISKFEKISFIGENGTIDGQGAIWWNMW------------RQRT--------LPF 57
+ S F + ++ G G IDGQG WW+ + R+R L +
Sbjct: 95 YASLFTGHDLKNVTITGR-GRIDGQGKAWWDAFWETDKMRTAAGIREREPENPEGSPLKY 153
Query: 58 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 117
RP +I ++ I+++ NSP W +HPVYC NV+I ++I+ P +SPNTDGIDPD
Sbjct: 154 PRPRMINLYRCENVKIADLTITNSPSWTVHPVYCRNVIIDGISIIQPYESPNTDGIDPDC 213
Query: 118 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 177
+ V I + YI GDD + +KSG++E+G G P I I T + S + +GSE SG
Sbjct: 214 CNGVRISNCYIDCGDDCITLKSGYNEHGRKKGIPCENIVISNCTFAHGRSAVGIGSEMSG 273
Query: 178 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG-DHPD 236
G++NV + G+ VKT GRGG + NI S + MEN R+GI I D+G +
Sbjct: 274 GIKNVTVMNCVFKGTLRGLRVKTGRGRGGTVENIFASGIIMENLREGISI--DMGYEGVS 331
Query: 237 DKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
K P + P I KD+ GT V+Q+ I GL +P I L +I +
Sbjct: 332 GKIYPVTESTPFFKNIRFKDIIGTNVEQAINIIGLAEAPPQFIVLEDIRM 381
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 108/138 (78%)
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 183
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSE SGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSEMSGGIRDIL 60
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 243
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 244 LPVVNGITIKDVWGTKVQ 261
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 111/167 (66%), Gaps = 1/167 (0%)
Query: 30 ISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 89
+ G NG IDGQG +WW R L +RPNL+EF+ S I+ISN+ F NSP W+IHPV
Sbjct: 150 VVITGNNGVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPV 209
Query: 90 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 149
YCSNV + VTI D+P TDGI PDS SN+CIEDS IS + +++KSGWD YGI++G
Sbjct: 210 YCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFG 269
Query: 150 HPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
P+S I I RV SS + +A GSE SGG+ ++ H+ +++ G
Sbjct: 270 RPTSDIRISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKG 316
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 114/172 (66%), Gaps = 3/172 (1%)
Query: 23 LISKFE--KISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQN 80
LIS + + G NG IDGQG +WW R L +RPNL+EF+ S I+ISN+ F N
Sbjct: 141 LISGYNLTDVVITGNNGVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLN 200
Query: 81 SPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 140
SP W+IHPVYCSNV + VTI D+P TDGI PDS SN+CIEDS IS + +++KSG
Sbjct: 201 SPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSG 260
Query: 141 WDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
WD YGI++G P+S I I RV SS + +A GSE SGG+ ++ H+ +++
Sbjct: 261 WDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHD 312
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 131/207 (63%), Gaps = 1/207 (0%)
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 168
TD + DS SN+CIEDS IS D +++KSGWD YGI G P+S I I RV + +
Sbjct: 137 TDVVITDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAA 196
Query: 169 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 228
+A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++ +SDV ME+ IK
Sbjct: 197 LAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFT 256
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+ PFT ICLSNI+
Sbjct: 257 GDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLAD 316
Query: 289 GPTSPPLKCSDVSGSAYQVKPWPCSEL 315
S CS++SG + V P PC +L
Sbjct: 317 STQSSSWSCSNISGYSELVFPEPCPDL 343
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSR 69
W + + E ++ G GTIDG+G WW ++R + RP LI F +
Sbjct: 86 WEGKEVLTYAHQIYGEDLEGVAITG-RGTIDGRGETWWRLFRAKAFTHPRPRLIAFTRCK 144
Query: 70 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 129
I+I V NSP W I+PV C V I VTI+ P DSPNTDGIDPDSS NV I + YI
Sbjct: 145 DILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPPDSPNTDGIDPDSSRNVYITNCYID 204
Query: 130 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 189
GDD +A+K+G ++ Y P I I G+ +GSETSGG+ V+ +
Sbjct: 205 VGDDCIAIKAGREDS--LYRTPCENIVIANCLMRHGHGGVVIGSETSGGIRKVVITNCIF 262
Query: 190 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------AGDVGDHPDDKFNPN- 242
+ GI +K+ GRGGF+ ++ +++ ME + G V D P+
Sbjct: 263 EDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCPFVLNMYYDTGGGVIDERAHDLEPHP 322
Query: 243 ---ALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSN--INLQGVAGPTSPPL 295
A P ++ + +VQ + + GL P + + I L A P P +
Sbjct: 323 VSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQPLEDVLFDDIWIELAADASPARPAM 381
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 150/308 (48%), Gaps = 44/308 (14%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWN-------------------MWRQ---------- 52
F E I+ G G IDGQG WWN MW +
Sbjct: 116 FYAKDVENITIKGR-GVIDGQGKAWWNEVYRIETAKGPIPETKYQKMWTEQNKGIVYEPY 174
Query: 53 --RTLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
RT+ F RP+ + N ++I+I V F+NSPFW I+P +C NV + +TI P SP
Sbjct: 175 YKRTIDKHFFRPSFFQAYNCKNILIEGVTFKNSPFWTINPEFCDNVTVTGITINNP-HSP 233
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
NTDGI+P S +NV I + +IS GDD + +KSG D G YG + +TI T S G
Sbjct: 234 NTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADGRKYGKATENVTITNCTMLSGHGG 293
Query: 169 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 228
+ +GSE SGG++ + + GI +K GRGG + +I V ++ M+N IK
Sbjct: 294 VVIGSEMSGGIKKITISNCVFDGTDRGIRIKAARGRGGVVEDIRVDNIVMKN----IKEE 349
Query: 229 GDVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 283
+ D DK NP P+ I I +V G V ++G ++G+ P I SNIN
Sbjct: 350 AIILDLFYDKDNPVEPVTERTPIFRNIHISNVTGGNVNKAGFVRGIVEMPIQNITFSNIN 409
Query: 284 LQGVAGPT 291
+ G G T
Sbjct: 410 MDGKEGFT 417
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 147/284 (51%), Gaps = 18/284 (6%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
K E +S G +GT+DGQG WW + R++ L + RP I F S ++I + NSP W
Sbjct: 101 KVENVSITG-HGTLDGQGEPWWRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWT 159
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+PV C+NVVI +TI PADSPNTDGI+PDS NV I + YIS GDD VA+KSG EY
Sbjct: 160 INPVRCNNVVIDGITIKNPADSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGV-EYS 218
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
Y P ITI T G+ +GSE SG V N+ + GI +KT GRG
Sbjct: 219 -KYRIPCENITITNCTMLDGHGGVVIGSEMSGCVRNITISNCVFEGTDRGIRIKTRRGRG 277
Query: 206 GFIRNITVSDVYMENARKGIKI-----AGDVGDHP--DDKFNPNAL----PVVNGITIKD 254
G + +I VS++ M+ + + G G P DK NP+ + PV + + +
Sbjct: 278 GVVEDIRVSNIIMKKVMCPLVMNMYYFCGKGGKEPIVKDK-NPHPVNEGTPVFRRVHLSN 336
Query: 255 VWGTKVQQ-SGLIQGLKNSPFTGICLSN--INLQGVAGPTSPPL 295
+ + +G GL P I + I++ A P P +
Sbjct: 337 ISAREAGACAGFFYGLPEMPIEDISFHDVYIHMADDAKPDRPAM 380
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 17 RFLSDFLISKFEKISFIGENGT--IDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIIS 74
R+ S E ++ GE T +DG G WW+ + ++ TR +LIEFM S+ I I
Sbjct: 100 RYTSLVHGEHVEDVTIQGEGPTSVLDGNGQYWWD--QVHSMTVTRGHLIEFMYSKDIRIY 157
Query: 75 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 134
++ ++SPFWN H V +R V I A +SPNTDG DPDS+ +V +E S GDD
Sbjct: 158 DLSMRDSPFWNNHFYDSERVHVRNVHISAKDNSPNTDGWDPDSARDVLVEHSTYVGGDDC 217
Query: 135 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 194
VA+KSGWD +G+AYG PS ITIR V + +GIA+GSE SGGVE+VL + +N+
Sbjct: 218 VAIKSGWDCFGVAYGKPSRNITIRDVNCTGSKAGIAIGSEMSGGVEDVLVQRVNILGKAN 277
Query: 195 GI-HVKTNIGRGGFIRNI 211
GI HVKT RGG++RN+
Sbjct: 278 GIAHVKTGPTRGGYVRNV 295
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 97/133 (72%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + IG NGTI+GQG +WW+ ++Q+ L TRP LIE M S + ISN+
Sbjct: 141 RFSSLIFGTNLTDVVIIGGNGTINGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNL 200
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+SP WN+HPVYCS+V+I+ +TILAP D PNTDGI+PDS +NV IED YI +GDD +A
Sbjct: 201 TLIDSPSWNVHPVYCSDVIIQGMTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIA 260
Query: 137 VKSGWDEYGIAYG 149
VKSGWD+YGI YG
Sbjct: 261 VKSGWDQYGIKYG 273
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 107/184 (58%), Gaps = 8/184 (4%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R S + + G NGTI GQG WW+ +R L TRP LIE M S + ISN+
Sbjct: 393 RHASLIFGTNLTDVVITGGNGTIHGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNL 452
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
I +SP WN+HP Y SNV+I+++TI+AP SPNTDGI+PDSS NV IED +I +GDD +A
Sbjct: 453 ILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIA 512
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSS--------PFSGIAVGSETSGGVENVLAEHIN 188
VKSGWD+YGI G + VT S+ PF+GI + + G E N
Sbjct: 513 VKSGWDQYGIKCGKGRIYMVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWN 572
Query: 189 LYNV 192
NV
Sbjct: 573 CTNV 576
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 260 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 319
V S + G+ PFTGIC+SN+ + P C++V G + QV P C L S+
Sbjct: 536 VTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDLLHPSK 595
Query: 320 QTGAC 324
+ C
Sbjct: 596 KVFNC 600
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 155/315 (49%), Gaps = 45/315 (14%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNM-WRQ---------------- 52
W + + + + ++ G+ G IDG G WW++ W++
Sbjct: 82 WEGVECYAMQACLYCADSDSVTVTGK-GVIDGSGDTWWDLRWQKADQGGPKSPIECKLAA 140
Query: 53 --------------RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRY 98
R + F RP L++F N ++ + V +NSPFW +HPVYC N+++R
Sbjct: 141 LNPGYRSQPGGGGGREVQFLRPALVQFYNCTNVRLEQVTLENSPFWTVHPVYCDNLLVRG 200
Query: 99 VTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 158
+TI P D+PNTDGID DS +NV I D +S GDD +A+KSG E GI P+ +T+R
Sbjct: 201 ITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSVGDDGIALKSGSGEDGIRVNRPTRNVTVR 260
Query: 159 RVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
T G+ +GSET+ G+ +VLAE+ G+ +K+ GRGG I ++ + ++ M
Sbjct: 261 GCTVRDAHGGMVIGSETAAGIRHVLAENCRFPGTDRGVRIKSRRGRGGEIYDVKLRNLVM 320
Query: 219 ENARKGIKI-----AGDVGDHPDDKFNPNALPVVNGIT-IKDVWGTKVQQS------GLI 266
E+ I I G+ D F+ +A PV + + DV T V+ S G I
Sbjct: 321 EDNLCPIAINMYYKCGET-DPKSPLFSLDAQPVTDSTPHVHDVEITGVRASGCKASAGFI 379
Query: 267 QGLKNSPFTGICLSN 281
GL SP + + +
Sbjct: 380 AGLPESPVGNLVIKD 394
>gi|147772320|emb|CAN69072.1| hypothetical protein VITISV_012807 [Vitis vinifera]
Length = 111
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 84/108 (77%)
Query: 218 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 277
ME AR GIKIAGDVGDHPDD FNPNALPVV G+ I+DVWG V Q G I GLKNSPFTGI
Sbjct: 1 MEKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGI 60
Query: 278 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 325
CLS INL G P + P KCSDVSG+A V PWPCSEL+S QTG+CS
Sbjct: 61 CLSKINLHGKIKPGTAPWKCSDVSGAAVGVSPWPCSELTSPGQTGSCS 108
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 148/310 (47%), Gaps = 35/310 (11%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAI------------WWNMWRQ----- 52
W ++R++S ++ GE G IDG G WW+ +
Sbjct: 208 WEGTEMYRYMSLITGDNVRNVTITGE-GVIDGNGETPIHDNAGNTYGNWWSKQYKEPLSD 266
Query: 53 ------------RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 100
+ LP+ RP+LIEF++S++I+I V QNSP W IHPVYC +V + V
Sbjct: 267 PAVSLVQSPNYSQGLPYARPSLIEFLHSQNILIQGVTVQNSPSWTIHPVYCDHVTLADVH 326
Query: 101 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 160
I+ P S NTDG+DPDS + + I D S GDD +A+KSG D G G PS I +R
Sbjct: 327 IVNPPTSDNTDGVDPDSVNGMQIIDDTFSVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNC 386
Query: 161 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+ G+++GSE SGGV+NVL E+ + G+ +KT GRGG ++NIT V M N
Sbjct: 387 HMLNGH-GVSIGSEMSGGVQNVLVENCDFDGTNAGLRIKTLRGRGGIVQNITFDHVSMSN 445
Query: 221 ARKGIKIAGDVGDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 276
+ I + P +A P + + ++ +Q+ GL P
Sbjct: 446 IQAQAFIIDENYASNGSALPPGPVTDATPAIRNLNFDNITVNGAKQAMYFSGLAELPIQN 505
Query: 277 ICLSNINLQG 286
I N+ + G
Sbjct: 506 IAFHNVAING 515
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 47/311 (15%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWR----------QRTLP-------------------- 56
++++ GE G I+GQG WW+ +R LP
Sbjct: 98 LKQVAIKGE-GVIEGQGQAWWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEW 156
Query: 57 ---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 113
F RP L++ M+ +++ + QNSPFWN H VYC +V +R V P+ +PN DG+
Sbjct: 157 QTQFLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGL 216
Query: 114 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
D DS SNV I D + GDD + +KSG DE G G P+ + + T G+ +GS
Sbjct: 217 DVDSCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHGGVVLGS 276
Query: 174 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 233
ET+GG+ NV + GI +KTN RGG + N+ +S++YME+ + I
Sbjct: 277 ETAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINA-FYK 335
Query: 234 HPDDKFN-----PNALPVVNG------ITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSN 281
H D+ N P A+PV G I I DV + +G I GL P + L +
Sbjct: 336 HGIDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRH 395
Query: 282 INLQGVAGPTS 292
+ + P
Sbjct: 396 VTFEMTLDPAE 406
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 107/173 (61%), Gaps = 11/173 (6%)
Query: 14 AIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIII 73
A R+ S + + G+NGTIDGQG +WW + L +TRP LIE M S I I
Sbjct: 139 AAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQI 198
Query: 74 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 133
SN+ NSP WN+HPVY N++I+ +TILAP SPNTDGI+PDS +N IED YI +GDD
Sbjct: 199 SNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDD 258
Query: 134 LVAVKSGWDEYGIAYG-HPSSGITI--------RRVTG--SSPFSGIAVGSET 175
VAVKSGWDEYGIAY H + + R+ G S PF+GI + + T
Sbjct: 259 CVAVKSGWDEYGIAYDWHRERRLYMVAENVSMAARLEGIPSDPFTGICISNVT 311
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 260 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS- 318
V + ++G+ + PFTGIC+SN+ + A P C+DV G + V P PCS L
Sbjct: 288 VSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQG 347
Query: 319 -QQTGAC 324
++T C
Sbjct: 348 PEKTSLC 354
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 148/305 (48%), Gaps = 38/305 (12%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWN-------------------MWRQ---------- 52
F + I+ G G IDGQG WWN MW +
Sbjct: 114 FYAKDVQNITITGR-GVIDGQGKAWWNEVYRIETAKEPLPPTKYQTMWEEQNKGLYTEPY 172
Query: 53 --RTL--PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
RT+ F RP+ + N ++I+I V FQNSPFW I+P +C NV + ++I P SP
Sbjct: 173 YKRTVDKKFFRPSFFQAYNCKNILIEGVTFQNSPFWTINPEFCDNVTVTGISIFNP-HSP 231
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
NTDGI+P S +NV I + +IS GDD + +KSG D G YG + +TI T S G
Sbjct: 232 NTDGINPSSCTNVHISNCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGHGG 291
Query: 169 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 228
+ +GSE SGG++ + + GI +K+ GRGG + +I V ++ M+N ++ +
Sbjct: 292 VVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIVL 351
Query: 229 GDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
D + P P+ I + ++ + V ++G I G+ P I SNIN+ G
Sbjct: 352 SLFYDK-GTQVEPVTEKTPIFRNIHMSNITASNVNKAGQILGITEMPIQNITFSNINMDG 410
Query: 287 VAGPT 291
G T
Sbjct: 411 KEGFT 415
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 47/311 (15%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWR----------QRTLP-------------------- 56
++++ GE G I+GQG WW+ +R LP
Sbjct: 99 LKQVAIKGE-GVIEGQGQAWWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEW 157
Query: 57 ---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 113
F RP L++ M+ +++ + QNSPFWN H VYC +V +R V P+ +PN DG+
Sbjct: 158 QTQFLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGL 217
Query: 114 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
D DS SNV I D + GDD + +KSG DE G G P+ + + T G+ +GS
Sbjct: 218 DVDSCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHGGVVLGS 277
Query: 174 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 233
ET+GG+ NV + GI +KTN RGG + N+ +S++YME+ + I
Sbjct: 278 ETAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINA-FYK 336
Query: 234 HPDDKFN-----PNALPVVNG------ITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSN 281
H D+ N P A+PV G I I DV + +G I GL P + L +
Sbjct: 337 HGIDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRH 396
Query: 282 INLQGVAGPTS 292
+ + P
Sbjct: 397 VTFEMTLDPAE 407
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 147/305 (48%), Gaps = 38/305 (12%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWN-------------------MWRQ---------- 52
F E I+ G G IDGQG WWN MW +
Sbjct: 114 FYAKDVENIAITGR-GIIDGQGKAWWNEVYRIETAKEPLPPTKYQTMWEEQNKGLYTEPY 172
Query: 53 --RTL--PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
RT+ F RP+ + N ++I+I V F+NSPFW I+P +C NV + ++I P SP
Sbjct: 173 YKRTVDKKFFRPSFFQAYNCKNILIEGVTFKNSPFWTINPEFCDNVRVTGISIFNP-HSP 231
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
NTDGI+P S +NV I D +IS GDD + +KSG D G YG + +TI T S G
Sbjct: 232 NTDGINPSSCTNVHISDCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGHGG 291
Query: 169 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 228
+ +GSE SGG++ + + GI +K+ GRGG + +I V ++ M+N ++ +
Sbjct: 292 VVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIVL 351
Query: 229 GDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
D P P+ I + ++ + V ++G I G+ P I SNIN+ G
Sbjct: 352 SLFYDK-GTTVEPVTEKTPIFRNIHMSNITASNVNKAGQILGITEMPIQNITFSNINMDG 410
Query: 287 VAGPT 291
G T
Sbjct: 411 KEGFT 415
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 138/264 (52%), Gaps = 9/264 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 115
RP I+F +++I NV NSPFW I+P +C NV + VTI P+ P NTDGI+P
Sbjct: 187 RPPFIQFYECNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINP 246
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGSEM 306
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGGV V + + GI +K++ GRGG + + V ++ M+N ++ I D+
Sbjct: 307 SGGVRRVTISNCVFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIF-DLFYDK 365
Query: 236 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG---P 290
+ K P PV I + ++ G+ ++Q G I+G++ P G+ SNIN++ G
Sbjct: 366 ESKMEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKAEVGFIVD 425
Query: 291 TSPPLKCSDVSGSAYQVKPWPCSE 314
+ ++ +V S+ PW S+
Sbjct: 426 IAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 146/266 (54%), Gaps = 27/266 (10%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
GTIDG+G WW R+ RP LI F +S I++ N+ QNSP W I P Y +++V
Sbjct: 124 GTIDGRGQSWWP---DRSAANKRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVF 180
Query: 97 RYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW------DEYGIAYG 149
R +T+ AP S NTDGIDP SSS+V IE I TGDD +A+KSG DE
Sbjct: 181 RNMTVYAPDRVSHNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQPNSPGGDE------ 234
Query: 150 HPSSGITIRRVTGSSPF---SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
PS I IR S F G+++GSE +GGV NVLAE I+ G G+ +K+N RG
Sbjct: 235 -PSHDIVIR----DSTFLHGHGLSIGSEVAGGVYNVLAERIHFKGTGTGVRIKSNRDRGN 289
Query: 207 FIRNITVSDVYMENARKGIKIAG---DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 263
+++ D+ ME+ I I+ + D D + P + ITI+++ T +Q+
Sbjct: 290 ELKHFVYRDLKMEDVNTPILISEFYPKIPDVIDSQPVGRLTPRFSDITIENLTATGARQA 349
Query: 264 GLIQGLKNSPFTGICLSNINLQGVAG 289
+I GL SP TG+ L+N+ ++ G
Sbjct: 350 AIIVGLPESPVTGLKLTNVRIKADKG 375
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 148/314 (47%), Gaps = 41/314 (13%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNM-------------WRQR--- 53
W + F F E I+ +G G IDG G WW W++
Sbjct: 106 WEGTEVINFSPLFYAKDVENIAIVGR-GLIDGHGKNWWRFSEVEVKKLTEDSKWQKEFKR 164
Query: 54 --------TLP------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYV 99
LP F RP I+FMN +++ I ++ QNSPFW I+P YC NV + +
Sbjct: 165 LNPNVLAPDLPGWIERGFLRPPFIQFMNCKNVQIKDIKIQNSPFWTINPQYCDNVTVDGI 224
Query: 100 TILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 159
TI P SPNTDGI+P+S NV I + +IS GDD + +KSG D G P+ TI
Sbjct: 225 TIDNPP-SPNTDGINPESCRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITN 283
Query: 160 VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 219
T G+ +GSE SGGV+N+ + GI +K+ GRGG + +I VS++ M
Sbjct: 284 CTMLRGHGGVVIGSEMSGGVKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMR 343
Query: 220 NARKGIKIAGDVGDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
N R V D K NP + P+ I I D+ + ++G + GL+ P +
Sbjct: 344 NIRD----QAIVLDLQYAKTNPEPISERTPIFRNIHISDITAS-TNRAGYLNGLEELPIS 398
Query: 276 GICLSNINLQGVAG 289
I +N+N+ G
Sbjct: 399 NISFNNVNMTANTG 412
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 143/311 (45%), Gaps = 47/311 (15%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWR----------QRTLP-------------------- 56
++++ GE G I+GQG WW+ +R LP
Sbjct: 99 LKQVAIKGE-GVIEGQGQAWWDAYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEW 157
Query: 57 ---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 113
F RP L++ M+ +++ + QNSPFWN H VYC +V +R V P+ +PN DG+
Sbjct: 158 QTQFLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGL 217
Query: 114 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
D DS SNV I D + GDD + +KSG D G G P+ + + T G+ +GS
Sbjct: 218 DVDSCSNVRISDCHFDVGDDCLCLKSGIDADGRRVGRPTENVAVTNCTMLHGHGGVVLGS 277
Query: 174 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 233
ET+GG+ NV + GI +KTN RGG + N+ +S++YME+ + I
Sbjct: 278 ETAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINA-FYK 336
Query: 234 HPDDKFN-----PNALPVVNG------ITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSN 281
H D+ N P A+PV G I I DV + +G I GL P + L +
Sbjct: 337 HGIDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRH 396
Query: 282 INLQGVAGPTS 292
+ + P
Sbjct: 397 VTFEMTLDPAE 407
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 9/264 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 115
RP I+F +++I NV NSPFW I+P +C NV + VTI P+ P NTDGI+P
Sbjct: 187 RPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINP 246
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGSEM 306
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGGV V + GI +K++ GRGG + + V ++ M+N ++ I D+
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIF-DLFYDK 365
Query: 236 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG---P 290
+ K P PV I + ++ G+ ++Q G I+G++ P G+ SNIN++ G
Sbjct: 366 ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKAEVGFIVD 425
Query: 291 TSPPLKCSDVSGSAYQVKPWPCSE 314
+ ++ +V S+ PW S+
Sbjct: 426 IAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 9/264 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 115
RP I+F +++I NV NSPFW I+P +C NV + VTI P+ P NTDGI+P
Sbjct: 187 RPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINP 246
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGSEM 306
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGGV V + GI +K++ GRGG + + V ++ M+N ++ I D+
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIF-DLFYDK 365
Query: 236 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG---P 290
+ K P PV I + ++ G+ ++Q G I+G++ P G+ SNIN++ G
Sbjct: 366 ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKAEVGFIID 425
Query: 291 TSPPLKCSDVSGSAYQVKPWPCSE 314
+ ++ +V S+ PW S+
Sbjct: 426 IAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 136/291 (46%), Gaps = 28/291 (9%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMW--RQRTLP----------------------F 57
L+++ E + G GT+DGQG WW + LP F
Sbjct: 97 LLVAEAENVEITGR-GTVDGQGDYWWQFYGVDDDELPASLADRLDSFHEANDKADDVSSF 155
Query: 58 T-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
T RP L + S ++ +S + +NSPFWN H VY NV + V + PAD+PN DGID D
Sbjct: 156 TLRPPLFQVDRSTNVSVSGITLRNSPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDID 215
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS V I D Y++ GDD V +KSG DE G G P+SGIT+ T + G+ +GSE S
Sbjct: 216 SSRYVRISDCYLNAGDDAVCIKSGKDEEGRRIGRPASGITVTNCTVEAGHGGVVIGSEMS 275
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
G V +V + + GI +KT GRGG + + ++ M I G D
Sbjct: 276 GDVRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDID 335
Query: 237 DKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
P + P+V I D+ V+ +G GL F I SN+ +
Sbjct: 336 SDPIPVDESTPMVRNIAYSDIIARDVETAGFFAGLPEQRFENISFSNVEID 386
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 9/264 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 115
RP I+F +++I NV NSPFW I+P +C NV + VTI P+ P NTDGI+P
Sbjct: 187 RPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINP 246
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGSEM 306
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGGV V + GI +K++ GRGG + + V ++ M+N ++ I D+
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIF-DLFYDK 365
Query: 236 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG---P 290
+ K P PV I + ++ G+ ++Q G I+G++ P G+ SNIN++ G
Sbjct: 366 ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKAEVGFIVD 425
Query: 291 TSPPLKCSDVSGSAYQVKPWPCSE 314
+ ++ +V S+ PW S+
Sbjct: 426 IAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 145/305 (47%), Gaps = 36/305 (11%)
Query: 20 SDFLIS-KFEKISFIGENGTIDGQGAIWW----------------NMWRQRTLPF----- 57
S FL + + E IS G G ++GQG WW N RT P
Sbjct: 108 SPFLYAHRCEDISITGA-GLLNGQGQSWWPWKHSQPGMSSIQGPDNFAALRT-PLEERVF 165
Query: 58 ------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD--SPN 109
RP + + + ++I V F++SP W + PV+CS+++IR+ TIL P S N
Sbjct: 166 GTREAGVRPVFCQPIECKRVLIEGVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHN 225
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 169
TDGIDPD+ NV IE + TGDD + +K+G DE G PS I IR S GI
Sbjct: 226 TDGIDPDACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPSENILIRHCEIRSGHGGI 285
Query: 170 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-GIKIA 228
+GSE S GV N+ A I +KT GRGGFI++I + ++ R +++
Sbjct: 286 TIGSEMSAGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELT 345
Query: 229 ---GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
GD + P D N +P V I I++V +++ ++GL P + L N+ +
Sbjct: 346 FHYGDTLEKPPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIH 405
Query: 286 GVAGP 290
P
Sbjct: 406 AFQNP 410
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 26/214 (12%)
Query: 36 NGTIDGQGAIWWNMWRQ--------------RTLPFT----------RPNLIEFMNSRSI 71
GTID QG + W Q + +P T RP+ I+FM I
Sbjct: 646 QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRI 705
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+SNV IE+ TG
Sbjct: 706 LVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPESTSNVLIEECIFRTG 763
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
DD +A+K+G D G G PS I IR S +G+ +GSE SGGVEN+ ++I +
Sbjct: 764 DDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGT 823
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 824 VKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 857
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 26/214 (12%)
Query: 36 NGTIDGQGAIWWNMWRQ--------------RTLPFT----------RPNLIEFMNSRSI 71
GTID QG + W Q + +P T RP+ I+FM I
Sbjct: 644 QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRI 703
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+SNV IE+ TG
Sbjct: 704 LVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPESTSNVLIEECIFRTG 761
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
DD +A+K+G D G G PS I IR S +G+ +GSE SGGVEN+ ++I +
Sbjct: 762 DDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGT 821
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 822 VKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 855
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 26/214 (12%)
Query: 36 NGTIDGQGAIWWNMWRQ--------------RTLPFT----------RPNLIEFMNSRSI 71
GTID QG + W Q + +P T RP+ I+FM I
Sbjct: 644 QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRI 703
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+SNV IE+ TG
Sbjct: 704 LVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPESTSNVLIEECIFRTG 761
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
DD +A+K+G D G G PS I IR S +G+ +GSE SGGVEN+ ++I +
Sbjct: 762 DDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGT 821
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 822 VKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 855
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 26/214 (12%)
Query: 36 NGTIDGQGAIWWNMWRQ--------------RTLPFT----------RPNLIEFMNSRSI 71
GTID QG + W Q + +P T RP+ I+FM I
Sbjct: 644 QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRI 703
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+SNV IE+ TG
Sbjct: 704 LVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPESTSNVLIEECIFRTG 761
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
DD +A+K+G D G G PS I IR S +G+ +GSE SGGVEN+ ++I +
Sbjct: 762 DDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGT 821
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 822 VKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 855
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 26/214 (12%)
Query: 36 NGTIDGQGAIWWNMWRQ--------------RTLPFT----------RPNLIEFMNSRSI 71
GTID QG + W Q + +P T RP+ I+FM I
Sbjct: 644 QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRI 703
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+SNV IE+ TG
Sbjct: 704 LVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPESTSNVLIEECIFRTG 761
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
DD +A+K+G D G G PS I IR S +G+ +GSE SGGVEN+ ++I +
Sbjct: 762 DDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGT 821
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 822 VKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 855
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 26/214 (12%)
Query: 36 NGTIDGQGAIWWNMWRQ--------------RTLPFT----------RPNLIEFMNSRSI 71
GTID QG + W Q + +P T RP+ I+FM I
Sbjct: 627 QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERIFGKGTILRPSCIQFMGCSRI 686
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+SNV IE+ TG
Sbjct: 687 LVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPESTSNVLIEECIFRTG 744
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
DD +A+K+G D G G PS I IR S +G+ +GSE SGGVEN+ ++I +
Sbjct: 745 DDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGGVENIYMDNIQIGT 804
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 805 VKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 838
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 139/278 (50%), Gaps = 22/278 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E I+ +G GTIDGQG +WW + R + L + RP + F +++ I + NSP W ++
Sbjct: 99 ENIAVVG-FGTIDGQGEMWWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVN 157
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + V I P DSPNTDGI+P+S V I + YI GDD V +KSG ++ +
Sbjct: 158 PIECENVTVHNVKIQNPYDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVR 217
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P I I + GI +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 218 I--PCENIAITNCIMAHGHGGIVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGI 275
Query: 208 IRNITVSDVYMEN------------ARKG--IKIAGDVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D + P+V I I
Sbjct: 276 VEDIRVSNIVMKNVICPFAFYMYYHCGKGGKEKRVWDKSPYPVD----STTPIVRRIYIS 331
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGP 290
DV + + +G + GL P + SN+ ++ P
Sbjct: 332 DVIVRQARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP 369
>gi|357494033|ref|XP_003617305.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518640|gb|AET00264.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 156
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 118/195 (60%), Gaps = 42/195 (21%)
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSGWD+YGI+YG SS ITIR V+GSSPF GIA SETSG V+NV +GI
Sbjct: 1 MKSGWDKYGISYGRLSSSITIRHVSGSSPFIGIAGVSETSGRVDNV---------NDMGI 51
Query: 197 HVKTNIGRGGFIRNITVSDVYME-NARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
K VY+ ++GI+I+GDVGDHPDDK + NALP+V
Sbjct: 52 EYKC---------------VYIYGECKEGIQISGDVGDHPDDKCDLNALPIV-------- 88
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS--PPLKCSDVSGSAYQVKPWPCS 313
++GLIQG+KNSPFT ICLS+INL V G S P KCSDV G A QV PWPC
Sbjct: 89 ------KAGLIQGMKNSPFTDICLSDINLHEVNGTRSRTPSCKCSDVFGVALQVSPWPCP 142
Query: 314 ELSSSQQTGACSNHF 328
EL S Q G+C +++
Sbjct: 143 EL-ISHQLGSCVSYY 156
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMW--RQRTLP----------------------F 57
L+ + +S G GTIDG G WW + + TLP F
Sbjct: 120 LLVDGADTVSITGR-GTIDGNGEYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSF 178
Query: 58 T-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
T RP L++ ++ ++ +S V +NSPFWN H VY NV I V I PAD+PN DGID D
Sbjct: 179 THRPPLLQVFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPADAPNGDGIDID 238
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS V I D+YI+ GDD + +KSG D G G P+S IT+ T + G+ +GSE S
Sbjct: 239 SSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMS 298
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
G V +V + + GI +KT GRGG + ++ + M I G D
Sbjct: 299 GDVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLD 358
Query: 237 DKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
P P+V ++ ++ V+ +G GL F GI ++ +
Sbjct: 359 SDPEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRIDAT 411
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 152/292 (52%), Gaps = 30/292 (10%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E I+ G G IDG+G WW Q LP RP LI F + + I + N+ QNS W I
Sbjct: 118 EDITITG-GGVIDGRGESWWP---QPNLP--RPRLIVFDHCKHIRMENITAQNSAMWQIV 171
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P Y ++V R + +LAP S NTDGIDP +S+ + I+ YI TGDD VA+KSG
Sbjct: 172 PYYSDDLVFRNMKVLAPQTSHNTDGIDPFASTKIVIDHVYIDTGDDNVAIKSGQP----- 226
Query: 148 YGHPSSGITIRRVT-GSSPF---SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
G P + R +T F G+++GSE +GGV+NV AE I+ GI VK+N
Sbjct: 227 -GSPGPDLPSRDITITDCEFLHGHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNRD 285
Query: 204 RGGFIRNITVSDVYMENARKGI-------KIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
RG I N D+ MEN + I KI + + P + P+ + ITI++V
Sbjct: 286 RGNDIGNFVFRDITMENVKTAILLSEFYPKIPDTITEEPVTRLTPH----FHDITIENVQ 341
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 308
+ + +I GL SP + L+N+++ + G T ++ +D+ + + VK
Sbjct: 342 AVGSRDAAVIVGLPESPIRNLKLTNVHISAIHGAT---IQYTDLVATDFVVK 390
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 143/273 (52%), Gaps = 21/273 (7%)
Query: 61 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD---------SPNTD 111
+LI N R ++I+ F+ + ++ N + Y T+ P D S T
Sbjct: 33 SLIHGQNLRDVVITA--FE-------YIIHVLNALALYQTLEVPVDIHPFFYNILSILTL 83
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIA 170
+ DS +V IE+ YIS GDD +A+KSGWD+YGIAYG PSS I IR VT S S GI+
Sbjct: 84 ALVTDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGIS 143
Query: 171 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 230
+GSE SGGV NV E++ ++ G+ +KT GRGG+IRNI+ ++ +N R GI I D
Sbjct: 144 IGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVD 203
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
+H DD ++ A P + I+ K + G V+ G P I ++++ G++
Sbjct: 204 YNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSV-GISYK 262
Query: 291 TSPPLKCSDVSGSAYQ-VKPWPCSELSSSQQTG 322
+CS + G + V P PC L + G
Sbjct: 263 KKHIFQCSYLEGRVIRPVFPKPCENLDVYDEQG 295
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 167/339 (49%), Gaps = 38/339 (11%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNM------------W-----------------RQ 52
F + E I+ G G IDG G WW+ W RQ
Sbjct: 114 FYANGVENIAITGR-GVIDGHGKKWWDFVEGYKEGQPRTKWQLEFDRRNKNILLPDDPRQ 172
Query: 53 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPNTD 111
F RP I+F++S++I+I ++ +NSPFW I+P +C NV + VTI P +++PNTD
Sbjct: 173 MKRGFLRPPFIQFLHSKNILIEGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTD 232
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
GI+P+S SNV I D +IS GDD + +KSG D G + P+ TI T G+ +
Sbjct: 233 GINPESCSNVHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCTMLRGHGGVVI 292
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGD 230
GSE SGGV+ + + GI +KT GRGG + +I VS++ M+N A + I + +
Sbjct: 293 GSEMSGGVKKIAISNCIFDGTDRGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLDME 352
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
++ + P I + ++ Q+ LI G++ P +GI L+++ + G
Sbjct: 353 YAKGAEEPVSERT-PTFRNIRLSNITAY-TNQALLINGIREMPVSGISLNDVVFEARQGI 410
Query: 291 TSPPLK-CSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 328
LK +D+S + +++ + L + Q N+F
Sbjct: 411 V---LKNAADISLNNVKIRIPAGTALKADQVERLDVNNF 446
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 138/278 (49%), Gaps = 22/278 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E ++ +G GTIDGQG WW + R + L + RP I F ++ I + NSP W ++
Sbjct: 99 ENVAVVG-FGTIDGQGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVN 157
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + V I P DSPNTDGI+P+S V I + YI GDD V +KSG ++
Sbjct: 158 PIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CK 215
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P ITI + G+ +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 216 QKIPCENITITNCIMAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGV 275
Query: 208 IRNITVSDVYMENAR------------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D+ + P+V I I
Sbjct: 276 VEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDE----STPIVRRIYIS 331
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGP 290
DV + + +G + GL P + SN+ ++ P
Sbjct: 332 DVVVREARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP 369
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 143/310 (46%), Gaps = 41/310 (13%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMW-----------RQRTLPFT------------ 58
L+ E +S G GTIDG G WW + ++R F
Sbjct: 123 LLVDDAENVSITG-RGTIDGGGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSF 181
Query: 59 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
RP L + S ++ +S V +NSPFWN H VY NV I V I PAD+PN DGID D
Sbjct: 182 THRPPLFQISESENVSVSGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDID 241
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS V I D+YI+ GDD + +KSG + G G P+S IT+ T + G+ +GSE S
Sbjct: 242 SSRYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMS 301
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------D 230
G V +V + + G+ +KT RGG + ++ ++ M I G D
Sbjct: 302 GDVRDVTVSNCTFTDTDRGVRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLD 361
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
P D+ P+V ++ ++ +V+ +G GL F GI +++ +
Sbjct: 362 SDSEPVDE----GTPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFNDVQIDA---- 413
Query: 291 TSPPLKCSDV 300
+ PL +D+
Sbjct: 414 -TRPLDATDL 422
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 115
RP I+F +I+I NV NSPFW I+P +C N+ + VTI P+ +P NTDGI+P
Sbjct: 190 RPPFIQFFECNNIVIENVKIINSPFWTINPAFCDNITVHGVTINNPSKNPKGPNTDGINP 249
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
S SNV I D +IS GDD + +KSG D G YG P +TI S G+ +GSE
Sbjct: 250 TSCSNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLSGHGGVVIGSEM 309
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGGV+ V + GI +K + GRGG + +I V ++ M+N + I D+
Sbjct: 310 SGGVKRVAISNCVFDGTDAGIRLKASRGRGGVVEDIRVDNIVMKNIGRNAFIF-DLFYDK 368
Query: 236 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
K P PV I + ++ G+ V+Q G I+G++ P + SNIN++ G
Sbjct: 369 LSKPEPVSERTPVFRNIHLSNITGSDVKQIGYIKGIEEMPINELSFSNINMEAEKG 424
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 137/278 (49%), Gaps = 22/278 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E ++ +G GTIDGQG WW + R + L + RP I F ++ I + NSP W ++
Sbjct: 99 ENVAVVG-FGTIDGQGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVN 157
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + V I P DSPNTDGI+P+S V I + YI GDD V +KSG ++
Sbjct: 158 PIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CK 215
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P ITI + G+ +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 216 QKIPCENITITNCIMAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGV 275
Query: 208 IRNITVSDVYMENAR------------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D + PVV I I
Sbjct: 276 VEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKKVWDKSPYPVD----STTPVVRRIYIS 331
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGP 290
DV + + +G + GL P + SN+ ++ P
Sbjct: 332 DVVVREARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP 369
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 135/296 (45%), Gaps = 48/296 (16%)
Query: 37 GTIDGQGAIWWNMWRQ---------------------------------RTLPFTRPNLI 63
G IDGQG WW M+R R F RP L+
Sbjct: 107 GVIDGQGDAWWRMYRDYREGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLL 166
Query: 64 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 123
+ +SR ++I +I +NS FWN H +Y V IR V+ P D+PNTDG++ DSS NV I
Sbjct: 167 QVKDSRRVVIEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRI 226
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 183
ED GDD + +KSG DE G G P+ + IR GI GSE +GGV NV+
Sbjct: 227 EDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVCGSEIAGGVRNVV 286
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVGDHPDDKFNP 241
+ GI +K+ GRGGF+ N+ V + ME + + G P ++
Sbjct: 287 VTGCIFQDTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVVNLYYRCGIDPGEEETI 346
Query: 242 NAL------------PVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ L P V I+I V+ T V+ S G + GL P G+ LS+ +
Sbjct: 347 SRLASLLPLPVDETTPAVRNISISQVFATGVKSSAGFLLGLPERPIEGLMLSDYRV 402
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 36/297 (12%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMW-----------RQRTLPFT------------ 58
L+ E +S G GTIDG G WW + ++R F
Sbjct: 98 LLVDDAENVSITG-RGTIDGGGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSF 156
Query: 59 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
RP L + S ++ +S V +NSPFWN H VY NV I V I PAD+PN DGID D
Sbjct: 157 THRPPLFQIYGSENVSVSGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDID 216
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS V I D+YI+ GDD + +KSG + G G P+S IT+ T + G+ +GSE S
Sbjct: 217 SSRYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMS 276
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------D 230
G V +V + + G+ +KT RGG + ++ ++ M I G D
Sbjct: 277 GDVRDVTVTNCTFTDTDRGVRIKTARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLD 336
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
P D+ P+V ++ ++ +V+ +G GL F GI S++ +
Sbjct: 337 SDSEPVDE----GTPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFSDVQIDAT 389
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 137/278 (49%), Gaps = 22/278 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E ++ +G GTIDGQG WW + R + L + RP I F ++ I + NSP W ++
Sbjct: 99 ENVAVVG-FGTIDGQGEKWWRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVN 157
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + V I P DSPNTDGI+P+S V I + YI GDD V +KSG ++
Sbjct: 158 PIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CK 215
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P ITI + G+ +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 216 ERIPCENITITNCIMAHGHGGVVIGSEMSGGVRNVVISNCVFEGTDRGIRIKTRRGRGGV 275
Query: 208 IRNITVSDVYMENAR------------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D + PVV I I
Sbjct: 276 VEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKKVWDKSPYPVD----STTPVVRRIYIS 331
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGP 290
DV + + +G + GL P + SN+ ++ P
Sbjct: 332 DVVVREARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP 369
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 139/283 (49%), Gaps = 23/283 (8%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E ++ +G GTIDGQG WW + R + L + RP I F ++ I + NSP W ++
Sbjct: 95 ENVAVVG-FGTIDGQGEKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVN 153
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + V I P DSPNTDGI+P+S V I + YI GDD V +KSG ++
Sbjct: 154 PIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CK 211
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P ITI + G+ +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 212 QKIPCENITITNCIMAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGV 271
Query: 208 IRNITVSDVYMENAR------------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D + P+V I I
Sbjct: 272 VEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVD----DTTPIVRRIYIS 327
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 295
DV + + +G + GL P + SN+ ++ P P L
Sbjct: 328 DVVVREARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP-EPEL 369
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 137/278 (49%), Gaps = 22/278 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E ++ +G GTIDGQG WW + R + L + RP I F ++ I + NSP W ++
Sbjct: 99 ENVAVVG-FGTIDGQGEKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVN 157
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + V I P DSPNTDGI+P+S V I + YI GDD V +KSG ++
Sbjct: 158 PIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CK 215
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P ITI + G+ +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 216 QKIPCENITITNCIMAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGV 275
Query: 208 IRNITVSDVYMENAR------------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D + P+V I I
Sbjct: 276 VEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVD----DTTPIVRRIYIS 331
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGP 290
DV + + +G + GL P + SN+ ++ P
Sbjct: 332 DVVVREARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP 369
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 146/327 (44%), Gaps = 47/327 (14%)
Query: 3 FGLMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMW-----------R 51
+G +W+++A E + G GTIDG G WW + R
Sbjct: 92 YGFHPCLWVTDA-------------ENVEISG-RGTIDGNGQYWWQFYGADDDELPEGLR 137
Query: 52 QRTLPFT--------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 97
+R F RP L + S ++ +S V QNSPFWN H VY NV I
Sbjct: 138 ERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGVTLQNSPFWNTHVVYSENVTIS 197
Query: 98 YVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
V +L PA+ +PN DGID DSS V I D+YI+ GDD + +KSG + G G P+S IT
Sbjct: 198 DVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSGKNAEGREVGEPASQIT 257
Query: 157 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 216
+ T + G+ +GSE SG V +V + + G+ +KT RGG + ++ ++
Sbjct: 258 VTNCTVEAGHGGVVIGSEMSGDVRDVAVTNCTFTDTDRGVRIKTQRDRGGVVEDLRFDNI 317
Query: 217 YMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 274
M I G D + P P+V +T ++ V+ +G GL F
Sbjct: 318 VMRRIASPFTINGYYFTPLDSEPEPVDEGTPMVRNVTFSNITARNVETAGFFAGLPEQYF 377
Query: 275 TGICLSNINLQGVAGPTSPPLKCSDVS 301
GI N+ + + PL +D+
Sbjct: 378 EGIEFDNVRIDA-----TRPLDATDLD 399
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 136/300 (45%), Gaps = 56/300 (18%)
Query: 37 GTIDGQGAIWWNMWRQ---------------------------------RTLPFTRPNLI 63
G IDGQGA WW M+R R F RP L+
Sbjct: 107 GVIDGQGASWWRMYRDYREGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLL 166
Query: 64 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 123
+ +SR ++I ++ +NS FWN H +Y V IR V+ P D+PNTDG++ DSS NV I
Sbjct: 167 QVKDSRRVVIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRI 226
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 183
ED GDD + +KSG DE G G P+ + IR GI GSE +GGV NV+
Sbjct: 227 EDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVCGSEIAGGVRNVV 286
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA----------RKGIKIAGDVGD 233
+ GI +K+ GRGGF+ N+ + + ME R GI D G+
Sbjct: 287 VTGCIFQDTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVVNLYYRCGI----DPGE 342
Query: 234 HPDDKFNPNALPV--------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ LP+ V I+I V T V+ S G + GL P G+ LS+ +
Sbjct: 343 EEIVSRLASLLPLPVDETTPAVRNISISQVLATGVKSSAGFLLGLPERPIEGLVLSDYRV 402
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 137/278 (49%), Gaps = 22/278 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E ++ +G GTIDGQG WW + R + L + RP I F ++ I + NSP W ++
Sbjct: 99 ENVAVVG-FGTIDGQGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVN 157
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + + I P DSPNTDGI+P+S V I + YI GDD V +KSG ++
Sbjct: 158 PIECQNVTVHNIKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CK 215
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P ITI + G+ +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 216 ERIPCENITITNCIMAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGV 275
Query: 208 IRNITVSDVYMENAR------------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D + PVV I I
Sbjct: 276 VEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVD----DTTPVVRRIYIS 331
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGP 290
DV + + +G + GL P + SN+ ++ P
Sbjct: 332 DVVVRQARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP 369
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 142/264 (53%), Gaps = 13/264 (4%)
Query: 37 GTIDGQGAIWWNMWRQRT------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 90
GTI+G GA WW M R+ +TRP LI F + + +++ V +NSP W I P Y
Sbjct: 133 GTINGNGASWWKMAREHKDTGVMGSQYTRPRLIVFNHCKHVVLEGVTVENSPMWQIVPYY 192
Query: 91 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 150
+V+IR + +LAP +PNTD IDP SSS+V IE + GDD +A+KSG +
Sbjct: 193 SDDVIIRNIHVLAPQHAPNTDAIDPFSSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDA 251
Query: 151 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 210
PS+ ITIR G++VGSE +GG +++LAE+I + GI VK N RG + +
Sbjct: 252 PSTYITIRDCIFLHGH-GLSVGSEIAGGAQHILAENITMTGTDNGIRVKANRDRGNDVSD 310
Query: 211 ITVSDVYMENARKGIKIAGDVGD-HPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGL 265
+ ++ M N + + I+ +P NP + P + IT+++V T + +G
Sbjct: 311 LVFKNIQMTNVKNALIISEFYPHIYPPMPDNPAPITRLTPHFHNITVENVTATNSKNAGA 370
Query: 266 IQGLKNSPFTGICLSNINLQGVAG 289
I GL +P + L N+++ G
Sbjct: 371 IAGLPEAPIRDVVLKNVSIDAQKG 394
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 137/278 (49%), Gaps = 22/278 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E ++ +G GTIDGQG WW + R + L + RP I F ++ I + NSP W ++
Sbjct: 99 ENVAVVG-FGTIDGQGEKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVN 157
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + V I P DSPNTDGI+P+S V I + YI GDD V +KSG ++
Sbjct: 158 PIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CK 215
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P ITI + G+ +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 216 QKIPCENITITNCIMAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGV 275
Query: 208 IRNITVSDVYMENAR------------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D + P+V I I
Sbjct: 276 VEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVD----STTPIVRRIYIS 331
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGP 290
DV + + +G + GL P + SN+ ++ P
Sbjct: 332 DVVVREARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP 369
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 138/278 (49%), Gaps = 22/278 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E ++ +G GTIDGQG WW + R + L + RP I F ++ I + NSP W ++
Sbjct: 99 ENVAVVG-FGTIDGQGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVN 157
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P+ C NV + + I P DSPNTDGI+P+S V I + YI GDD V +KSG ++
Sbjct: 158 PIECQNVTVHNIKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CK 215
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P ITI + G+ +GSE SGGV NV+ + GI +KT GRGG
Sbjct: 216 ERIPCENITITNCIMAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGV 275
Query: 208 IRNITVSDVYMENAR------------KGIKIAG--DVGDHPDDKFNPNALPVVNGITIK 253
+ +I VS++ M+N KG K D +P D+ + P+V I I
Sbjct: 276 VEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDE----STPIVRRIYIS 331
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQGVAGP 290
DV + + +G + GL P + SN+ ++ P
Sbjct: 332 DVVVREARAAAGFLYGLTEMPIEDVVFSNVTVEMAQNP 369
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 143/305 (46%), Gaps = 36/305 (11%)
Query: 20 SDFLIS-KFEKISFIGENGTIDGQGAIWW----------------NMWRQRTLPF----- 57
S FL + + E IS G G ++GQG WW N RT P
Sbjct: 108 SPFLYAHRCEDISITGA-GLLNGQGQSWWPWKHSQPGMSSIQGPDNFAALRT-PLEERVF 165
Query: 58 ------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD--SPN 109
RP + + + ++I V F++SP W + PV+C+++ +R+ TIL P S N
Sbjct: 166 GTREAGVRPVFCQPIECKRVLIEGVTFRDSPSWTLQPVWCADLTLRHSTILNPPSPFSHN 225
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 169
TDGIDPD+ NV IE + TGDD + +K+G DE G P I IR S GI
Sbjct: 226 TDGIDPDACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPCENILIRHCEIRSGHGGI 285
Query: 170 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-GIKIA 228
+GSE S GV N+ A I +KT GRGGFI++I + ++ R +++
Sbjct: 286 TIGSEMSAGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELT 345
Query: 229 ---GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
GD + P D N +P V I I++V +++ ++GL P + L N+ +
Sbjct: 346 FHYGDTLEKPPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIH 405
Query: 286 GVAGP 290
P
Sbjct: 406 AFQNP 410
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 136/293 (46%), Gaps = 28/293 (9%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMW--RQRTLP----------------------F 57
L+ + +S G GTIDG G WW + + TLP F
Sbjct: 98 LLVDGADTVSITGR-GTIDGNGEYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSF 156
Query: 58 T-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
T RP L++ ++ ++ +S V +NSPFWN H VY NV I V I PA +PN DGID D
Sbjct: 157 THRPPLLQVFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDID 216
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS V I D+YI+ GDD + +KSG D G G P+S IT+ T + G+ +GSE S
Sbjct: 217 SSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMS 276
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
G V +V + + GI +KT GRGG + ++ + M I G D
Sbjct: 277 GDVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLD 336
Query: 237 DKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
P P+V ++ ++ V+ +G GL F GI ++ +
Sbjct: 337 SDPEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 23/298 (7%)
Query: 26 KFEKISFIGENG----TIDGQGAIWWNMWRQRTLP----------FTRPNLIEFMNSRSI 71
+F+ I ENG T+D +W + + + RP I+F +I
Sbjct: 140 EFDTRKVIKENGGKLPTLDKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFYECTNI 199
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYI 128
+I NV NSPFW I+P +C NV I VTI P+ +P NTDGI+P S NV I D +I
Sbjct: 200 LIENVKIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFI 259
Query: 129 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 188
S GDD + +KSG D G YG ITI S G+ +GSE SGGV+ V +
Sbjct: 260 SVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEMSGGVKRVAISNCV 319
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPV 246
GI +K + GRGG + +I V ++ M+N +G D+ K P P+
Sbjct: 320 FDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNI-QGDAFIFDLFYDRLSKVEPVSERTPI 378
Query: 247 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVAGPTSPPLKCSDVS 301
I + +V G +++ G I+G++ P + + SN+N+ QG T+ ++ ++VS
Sbjct: 379 FRNIHLSNVTGNDIKRIGYIKGIEEMPVSELSFSNMNIVAEQGFKAETATDIRFNNVS 436
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 130/278 (46%), Gaps = 26/278 (9%)
Query: 36 NGTIDGQGAIWWNMW----------RQRT---------LPFTRPNLIEFMNSRSIIISNV 76
GTIDGQG WW QRT L + RP++I+ + S+ ++I +
Sbjct: 123 RGTIDGQGQAWWKRMGWPDRRKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGL 182
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
NS W ++P+ C V I +TI P SPNTDGI+P+S NV I +S I GDD V
Sbjct: 183 HLINSASWTVNPLLCEFVRIDGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVT 242
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSG DE G G P ITI + +GSE SGGV NV+ + VGI
Sbjct: 243 LKSGKDEAGRRVGRPDENITITNCVMLKGHGAVTIGSEMSGGVRNVVVSNCVFQGTDVGI 302
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKI----AGDVGDHPDDKFN-PNALPVVNGIT 251
VK+ GRGG + VS+V M++ + AG D P D F P +
Sbjct: 303 RVKSQRGRGGIVEGFVVSNVVMQDVASAFTLTSFYAGT--DKPGDLFPVGEGTPRLRDFR 360
Query: 252 IKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
++ + +G I GLK P I + + +Q G
Sbjct: 361 FSNITARGSKTAGQITGLKEMPIENITFTGVRIQAETG 398
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 133/293 (45%), Gaps = 28/293 (9%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMW-----------RQRTLPFT------------ 58
L+ + +S G+ G IDG G WW + + R F
Sbjct: 98 LLVDGTDTVSITGQ-GAIDGNGEYWWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSF 156
Query: 59 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
RP L++ ++ ++ +S V +NSPFWN H VY NV I V I PA +PN DGID D
Sbjct: 157 THRPPLLQIFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDID 216
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS V I D+YI+ GDD + +KSG D G G P+S IT+ T + G+ +GSE S
Sbjct: 217 SSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVANCTVEAGHGGVVIGSEMS 276
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
G V +V + + GI +KT GRGG + ++ + M I G D
Sbjct: 277 GDVRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLD 336
Query: 237 DKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
P P+V ++ ++ V+ +G GL F GI ++ +
Sbjct: 337 SDPEPTGEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 140/278 (50%), Gaps = 14/278 (5%)
Query: 18 FLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVI 77
++S E I+ G GT++GQGA WW ++++ +L + RPNL+ F + + I V
Sbjct: 95 YMSCIYACHAENIAITG-FGTLNGQGAYWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVK 153
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP W +HP C NV I V+I+ PA+SPNTDGI+P+S NV I D I GDD +A+
Sbjct: 154 MIDSPSWTVHPNDCDNVTISGVSIVNPANSPNTDGINPESCRNVKISDCSIDVGDDCIAI 213
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+G ++ A P ITI T G+ GSE SG + NV+ + GI
Sbjct: 214 KAGTEDAERAI--PCENITITNCTMLHGHGGVVFGSEMSGDIRNVVVSNCIFEGTDRGIR 271
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP-NAL-PVV 247
K+ GRGG I NI V+++ M N + G G P D + P AL P
Sbjct: 272 FKSRRGRGGTIENIRVNNIVMNNVICPFILNLYYYHGPRGMEPYVWDKEVQPVTALTPKF 331
Query: 248 NGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINL 284
I ++ T V +G + GL P I S+I +
Sbjct: 332 RHIHFSNITATDVTAAAGFMYGLPEMPVEDITFSHIRI 369
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 118/229 (51%), Gaps = 34/229 (14%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWN-MWRQ------------------------------- 52
SK E I+ G +G IDG G WWN +W+
Sbjct: 98 SKAENITIAG-SGHIDGNGEPWWNSLWQAKAEKRTHPKYPYELQLADLNKDYRNQPSGGG 156
Query: 53 -RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
R L F RP LI+F+N ++I + NV QNSPFWN H +CS+ I V + P ++PNTD
Sbjct: 157 GRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDCTITGVHFINPKEAPNTD 216
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G++ DS S++ I++ GDD + +KSG E GI P+ I I T + G+ +
Sbjct: 217 GLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENILIDSCTMKNGHGGVVI 276
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GSET+GG+ N+ + ++ G+ +KT GRGG I NI + YM+N
Sbjct: 277 GSETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEHCYMKN 325
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 36 NGTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
+GT+DGQG WW + R+ L + RP LI F S I IS++ SP W +HP+ C +
Sbjct: 109 SGTLDGQGTNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYD 168
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V I+ ++IL PADSPNTDGIDP+S N+ I + I GDD +A+KSG ++ +
Sbjct: 169 VTIQNISILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTS-KSACE 227
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
ITI T + +GSE SG + NV + GI +KT GRGG + NITV
Sbjct: 228 NITISNCTMVHGHGAVVLGSEMSGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITV 287
Query: 214 SDVYMENARKGIKIAGD--VGDHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-Q 262
S + ME+ I G +K+ NP P I ++ KV+
Sbjct: 288 STIVMEDVLCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAA 347
Query: 263 SGLIQGLKNSPFTGICLSNINLQ 285
+G I GL P + +NI ++
Sbjct: 348 AGFIYGLPEMPVQDVSFTNIQIE 370
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 148/298 (49%), Gaps = 23/298 (7%)
Query: 26 KFEKISFIGENG----TIDGQGAIWWNMWRQRTL----------PFTRPNLIEFMNSRSI 71
+FE I ENG ++D +W + + + RP I+F +I
Sbjct: 140 EFETRKVIKENGGKLPSLDKLQQMWVDANKDLEISDYYKPSLERKMFRPPFIQFYECTNI 199
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDPDSSSNVCIEDSYI 128
+I NV NSPFW ++P +C NV I VTI P+ +P NTDGI+P S NV I D +I
Sbjct: 200 LIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFI 259
Query: 129 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 188
S GDD + +KSG D G YG ITI S G+ +GSE SGGV+ + +
Sbjct: 260 SVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEMSGGVKRIAISNCV 319
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPV 246
GI +K + GRGG + +I V ++ M+N +G D+ K P P+
Sbjct: 320 FDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNI-QGDAFIFDLFYDRLSKVEPVSERTPI 378
Query: 247 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVAGPTSPPLKCSDVS 301
I + +V G +++ G I+G++ P + + SN+N+ +G T+ ++ ++VS
Sbjct: 379 FRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNIVAGKGFQAETATDIRFNNVS 436
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 133/251 (52%), Gaps = 9/251 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 115
RP I+F +I+I NV NSPFW ++P +C NV I VTI P+ +P NTDGI+P
Sbjct: 187 RPPFIQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINP 246
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEM 306
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGGV+ + + GI +K + GRGG + +I V ++ M+N +G D+
Sbjct: 307 SGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNI-QGDAFIFDLFYDR 365
Query: 236 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVAGP 290
K P P+ I + +V G +++ G I+G++ P + + SN+N+ +G
Sbjct: 366 LSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNIVAGKGFQAE 425
Query: 291 TSPPLKCSDVS 301
T+ ++ ++VS
Sbjct: 426 TATDIRFNNVS 436
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 112/196 (57%), Gaps = 5/196 (2%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
E ++ G +G I+G G WW R R L + RP LI F R + I +V +SP W
Sbjct: 99 LENVTVTG-SGCINGNGQPWWEKQRNRPEELHYPRPKLISFDRCRRVTIRDVSLVDSPSW 157
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
++P+ C NV I V+IL PADSPNTDGI+P+S SNV I + +I GDD +A+K+G +E
Sbjct: 158 TVNPIRCHNVTIDNVSILNPADSPNTDGINPESCSNVRISNCHIDVGDDCIAIKAGTEE- 216
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
A P ITI T G+ +GSE SG + NV + + GI +K+ GR
Sbjct: 217 -TAERVPCENITITNCTMIHGHGGVVIGSEMSGNIRNVTISNCVFQHTDRGIRLKSRRGR 275
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ MEN
Sbjct: 276 GGIVEDIRVSNLVMEN 291
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 136/272 (50%), Gaps = 15/272 (5%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
GT++GQGA WW ++++ L + RPNL+ F + + + V +SP W +HP C NV I
Sbjct: 112 GTLNGQGAYWWKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTI 171
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
V+I+ PA+SPNTDGI+P+S NV I D I GDD +A+KSG ++ P IT
Sbjct: 172 SAVSIVNPANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTEDAERVI--PCENIT 229
Query: 157 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 216
I T G+ GSE SG + NV+ + GI K+ GRGG I NI V+++
Sbjct: 230 ITNCTMLHGHGGVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNI 289
Query: 217 YMENARKGIKI-----AGDVGDHP---DDKFNP-NAL-PVVNGITIKDVWGTKV-QQSGL 265
M N + G G P D + P AL P I ++ T V +G
Sbjct: 290 VMNNIICPFILNLYYYHGPRGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGF 349
Query: 266 IQGLKNSPFTGICLSNIN--LQGVAGPTSPPL 295
+ GL P I S+I ++ A P P +
Sbjct: 350 MYGLPEMPVEDITFSHIRIAMKPDAEPDLPAM 381
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 137/284 (48%), Gaps = 15/284 (5%)
Query: 14 AIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSI 71
A+ R S L + E+ I GTIDG G WW+ +R R L RP LI +
Sbjct: 82 AVGRVHSPCLYAHGERDVAITGLGTIDGGGQTWWDTFRHRREELAHPRPTLIGLHECERV 141
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
I +V +NSP W +HP C +V + + I PA+SPNTDGIDP+S NV I D +I G
Sbjct: 142 TIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDCHIDVG 201
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
DD +A+K+G + + +TI T G+ +GSE SGGV NV+ +
Sbjct: 202 DDCIALKAGTERTPDRVA--TENVTITGCTMVRGHGGVVIGSEMSGGVRNVVISNCVFQG 259
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP-- 241
GI +KT RGG + N+ VS + M++ + + G G P D P
Sbjct: 260 ADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPFYFCGPDGKEPHVGDRTARPVD 319
Query: 242 NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
P + + + + T V S G + GL +P + L ++++
Sbjct: 320 AGTPHLRSLHLSHLTATNVHASAGHVFGLPEAPLSDFSLHDVSI 363
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 36 NGTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
+GT+DGQG WW + R+ L + RP LI F S I IS++ SP W +HP+ C +
Sbjct: 109 SGTLDGQGTNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYD 168
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V I+ ++IL PADSPNTDGIDP+S N+ I + I GDD +A+KSG ++ +
Sbjct: 169 VTIQNISILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKS-ACE 227
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
ITI T + +GSE S + NV + GI +KT GRGG + NITV
Sbjct: 228 NITISNCTMVHGHGAVVLGSEMSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITV 287
Query: 214 SDVYMENARKGIKIAGD--VGDHPDDKF----NP----NALPVVNGITIKDVWGTKVQQS 263
S + ME+ I G +K+ NP P I ++ KV+ +
Sbjct: 288 STIVMEDVLCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAA 347
Query: 264 -GLIQGLKNSPFTGICLSNINLQ 285
G I GL P + +NI ++
Sbjct: 348 EGFIYGLPEMPVQDVSFTNIQIE 370
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 79/98 (80%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R++S + + GENGTIDGQG +WW+MW++RTLPFTRP+L+E M S +++SN+
Sbjct: 138 RYMSLIHGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNL 197
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 114
+FQ+SPFWNIHPVYCSNVVI +T+LAP DSPNTDGID
Sbjct: 198 VFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGID 235
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 130/255 (50%), Gaps = 10/255 (3%)
Query: 45 IWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL 102
+WW+ + T RP I+ +N ++I V QNSP W IHP+Y N+ I V +
Sbjct: 302 LWWDNPKATDPTKQTARPRTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVK 361
Query: 103 ---APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 159
+P DSPNTDG+DPDS N+ + ++ GDD +A+KSG D G G PSS ITIR
Sbjct: 362 NPSSPVDSPNTDGLDPDSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRN 421
Query: 160 VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 219
G+ +GSE SGG+ N+ + + +G+ +KT GRGG I+++ ++ M+
Sbjct: 422 SLMLHGHGGVTLGSEMSGGINNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMK 481
Query: 220 N-ARKGIKIAGDVGDH----PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 274
N + I + + P P + + K++ +++ QGL+ P
Sbjct: 482 NISSDAFNINSNYSSNGAPLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPV 541
Query: 275 TGICLSNINLQGVAG 289
G+ LSNIN+ G
Sbjct: 542 DGVTLSNINVTADKG 556
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 258 TKVQQSGLIQGLKNSPF 274
+++ +G ++G++N+PF
Sbjct: 121 XEIKTAGSVEGIQNAPF 137
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 136/271 (50%), Gaps = 16/271 (5%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
E IS G +GT+DG G WW R+ L + RP LI F + + I +V+ +NSP W
Sbjct: 122 LENISVTG-SGTLDGNGQPWWEKHRKHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSW 180
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
++P+ C NV I V+IL P DSPNTDGI+P+S SNV I + I GDD +A+K+G ++
Sbjct: 181 TVNPIACYNVTIDNVSILNPTDSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED- 239
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
P ITI T + +GSE SG + NV + GI +K+ GR
Sbjct: 240 -TQERIPCENITITNCTMVHGHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGR 298
Query: 205 GGFIRNITVSDVYMENARKG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKD 254
GG + +I VS++ ME+ + + G DK+ NP + P I D
Sbjct: 299 GGIVEDIRVSNIVMEDVICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSD 358
Query: 255 VWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 284
+ +V +G + GL I SNI++
Sbjct: 359 ITARQVHAAAGFLYGLAEQYIAEITFSNIDI 389
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 135/271 (49%), Gaps = 16/271 (5%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
E IS G +GT+DG G WW R L + RP LI F + + I +V+ +NSP W
Sbjct: 99 LENISITG-SGTLDGNGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSW 157
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
++P+ C NV I ++IL PADSPNTDGI+P+S SNV I + I GDD +A+K+G ++
Sbjct: 158 TVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED- 216
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
P ITI T + +GSE SG + NV + GI +K+ GR
Sbjct: 217 -TQERIPCENITITNCTMVHGHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGR 275
Query: 205 GGFIRNITVSDVYMENARKG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKD 254
GG I +I +S++ ME + + G DK+ NP + P I D
Sbjct: 276 GGIIEDIRISNIVMEEVICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSD 335
Query: 255 VWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 284
+ +V +G + GL I SNI++
Sbjct: 336 ITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 136/271 (50%), Gaps = 16/271 (5%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
E IS G +GT+DG G WW R L + RP LI F + + I +V+ +NSP W
Sbjct: 99 LENISVTG-SGTLDGNGQPWWQKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSW 157
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
++P+ C NV I ++IL PADSPNTDGI+P+S SNV I + I GDD +A+K+G ++
Sbjct: 158 TVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDT 217
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
P ITI T + +GSE SG + NV + GI +K+ GR
Sbjct: 218 QERI--PCENITITNCTMVHGHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGR 275
Query: 205 GGFIRNITVSDVYMENARKG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKD 254
GG I +I VS++ ME+ + + G DK+ NP + P I D
Sbjct: 276 GGTIEDIRVSNIVMEDVICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSD 335
Query: 255 VWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 284
+ +V +G + GL I SNI++
Sbjct: 336 ITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 128/227 (56%), Gaps = 7/227 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP IE +N R+I+I V ++ FW IHP+ C+NV +R V+I + + N+DG DP+S+
Sbjct: 201 RPAFIEPLNCRNILIEGVRIIDATFWVIHPIGCNNVTVRNVSI--DSFNANSDGFDPEST 258
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
+N +E+ + TGDD +A+KSG D+ G G P+ I +R T S SG+ +GSE SGG
Sbjct: 259 TNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRNSTFESLASGVCIGSEISGG 318
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 238
V NV E+I + I+ K+N+ RGG++ N + +V M++ I+ D +
Sbjct: 319 VRNVFIENIKIPKASNAIYFKSNLDRGGYMENTWIRNVNMDSVGTAIRFDPDYKSESKE- 377
Query: 239 FNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 284
N N TI+++ +SG+ + G K+ P T + L N+ +
Sbjct: 378 ---NYATRFNNFTIENINCAYASRSGIEVNGFKDMPITNVALKNVRI 421
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 258 TKVQQSGLIQGLKNSPF 274
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 139/308 (45%), Gaps = 36/308 (11%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------------------------ 57
++ E ++ GE G +DG G+ WW++ F
Sbjct: 117 LYVADAENVTITGE-GVVDGGGSHWWDLVETPEAEFPDDLKERLAEIRSGHRQDDVSTFT 175
Query: 58 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 117
RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DS
Sbjct: 176 VRPPLLQIHECENVTVSGVTLRNSPFWNTHVVYSEDVTIHDVSIRNPPDAPNGDGIDIDS 235
Query: 118 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 177
S V + D++I GDD + +KSG DE G G P+ + + T G+ VGSET+G
Sbjct: 236 SRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHGGVVVGSETAG 295
Query: 178 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----DVGD 233
V +V + + GI +K+ GRGG + ++ + M + G D+
Sbjct: 296 DVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVLNGYYQTDIDS 355
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 293
P K A P V + + +V+ + + GL F GI +++++ +
Sbjct: 356 DP--KPVDEATPNVRNVNFHHITAEEVESAAFLAGLPERRFEGISFTDVDIDA-----TR 408
Query: 294 PLKCSDVS 301
P +D+S
Sbjct: 409 PFDATDLS 416
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 146/313 (46%), Gaps = 42/313 (13%)
Query: 28 EKISFIGENGTIDGQGAIWW--------------------NMWR------------QRT- 54
E I+ G G IDGQG WW MW Q+T
Sbjct: 124 ENITITGR-GKIDGQGKDWWMEMYRIHEAAPETLEESKYQKMWTAANEGLETSPNYQKTM 182
Query: 55 -LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 113
L F RP LI+ +++ I V NSPFW ++P +C NV I VTI P SPNTDGI
Sbjct: 183 RLKFFRPPLIQPFRCKNVRIEGVTIVNSPFWTVNPAFCDNVTITGVTIENPP-SPNTDGI 241
Query: 114 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+P S NV I DS+IS GDD + +KSG D G + P+ +TI T S G+ +GS
Sbjct: 242 NPTSCRNVHISDSHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLSGHGGVVIGS 301
Query: 174 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 233
E SG + V + GI +K GRGG + I V +V M++ + + D
Sbjct: 302 EVSGSIRKVTISNCVFDGTDRGIRLKAARGRGGVVEEIRVDNVVMKDIQLEAIVMNLFYD 361
Query: 234 HPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVA 288
+ K P P I I +V G+++ +G I G+ P I SNIN+ +G++
Sbjct: 362 K-NTKEGPVTEETPAFRNIHISNVTGSQINVAGKILGIPEMPIDQISFSNINMDAKEGIS 420
Query: 289 GPTSPPLKCSDVS 301
T+ ++ DV
Sbjct: 421 IHTATNVELHDVQ 433
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 138/282 (48%), Gaps = 34/282 (12%)
Query: 36 NGTIDGQGAIWWNMWRQ-------------RTLPFT-----------RPNLIEFMNSRSI 71
GT DGQG WW W++ R +P RPN++EF+N R +
Sbjct: 123 RGTFDGQGDAWWE-WKKNEDGVRRLIDMVARRVPIAERIFGTVADCVRPNMLEFINCRDV 181
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
+I NV ++SP + +HPV C NV +R ++IL + PN DGIDP+ NV IED + TG
Sbjct: 182 LIENVTLRDSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEYCRNVLIEDCLVDTG 239
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
DD + +KSG D+ G A P+ + +RR+ GI +GSE S G+ NVL E +
Sbjct: 240 DDCICLKSGRDQDGWAENRPTENVIVRRIRTRRGHGGIVLGSELSSGIRNVLVEDCDFSG 299
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDDKF------NPNAL 244
GI +K+ GRGGF+ NI + ++ M + + I I D G + N +
Sbjct: 300 TERGIRIKSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVAKGQVGSAFQSNTPSP 359
Query: 245 PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ I I+DV ++ I G P I L N+ L
Sbjct: 360 TRMRNILIEDVTCASAGKALDITGDAALPPESITLRNLRLHA 401
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNM------------W-----------------RQ 52
F K E IS IG G IDG G WW+ W +Q
Sbjct: 122 FYAYKAENISIIGR-GLIDGHGKKWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQ 180
Query: 53 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 112
F RP I+ M ++++I + +NSPFW ++P + NV I VTI P SPNTDG
Sbjct: 181 MKRGFLRPPFIQTMFCKNVLIDGITIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNTDG 239
Query: 113 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 172
I+P+S NV I D +IS GDD + +KSG DE G P+ I T S G+ +G
Sbjct: 240 INPESCKNVHISDCHISVGDDCITIKSGKDEPGRRMAIPAENYVITNCTMLSGHGGVVIG 299
Query: 173 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 232
SE SG V + + GI +KT GRGG + I VS++ M K IK V
Sbjct: 300 SEMSGDVRKITISNCVFDGTDRGIRIKTARGRGGIVEEIRVSNIIM----KDIKQQAIVL 355
Query: 233 DHPDDKFN----PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
D K N + P I ++ G +V Q+ + GL+ P I ++IN++
Sbjct: 356 DMQYAKTNVQPVSDRTPKFRNIHFSNITG-QVNQAAYLNGLEEMPIENITFNDINMEAKT 414
Query: 289 G 289
G
Sbjct: 415 G 415
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 258 TKVQQSGLIQGLKNSPF 274
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 138/277 (49%), Gaps = 23/277 (8%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLP------FTRPNLIEFMNSRSIIISNVIFQNS 81
E I+ G GTIDG G IWW RP + F +S+ I + + QN+
Sbjct: 118 ENITITG-GGTIDGNGHIWWEYVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEGITVQNA 176
Query: 82 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 141
FW I P Y ++V R + ILAP SPNTD IDP SSSN+ I+ + S GDD VA+KSG
Sbjct: 177 GFWQIVPYYADDLVFRNLKILAP-HSPNTDAIDPFSSSNIVIDHVFSSVGDDNVAIKSGA 235
Query: 142 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTN 201
PS ITI T + G+++GSE +GGV+NV AE I+ GI +K N
Sbjct: 236 IN-SPGPDAPSKNITITDCTFENGH-GLSIGSEIAGGVQNVHAERIHFKGTDQGIRIKAN 293
Query: 202 IGRGGFIRNITVSDVYMENARKGIKIA---------GDVGDHPDDKFNPNALPVVNGITI 252
RG + NI+ D+ M + + I I G+V P + P + I I
Sbjct: 294 RDRGNDVSNISFKDIDMVDVKTAILITEYYPKAAPDGEVPSMPMGRLTPR----FHDIAI 349
Query: 253 KDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
++V T +G I GL SP G+ L N++LQ G
Sbjct: 350 ENVHATGSGSAGTIVGLPESPVEGLSLKNVDLQAKTG 386
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 137/304 (45%), Gaps = 32/304 (10%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNM-----------------------WRQRTLPFT-R 59
++ E ++ GE G IDG G+ WW + FT R
Sbjct: 96 VADAENVTITGE-GVIDGGGSYWWEFVSLPPEQYPSELTERLEEIRRGNQQDEVSTFTVR 154
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 155 PPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSR 214
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G V
Sbjct: 215 FVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDV 274
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 239
+V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 275 RHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTDIDSDP 334
Query: 240 NP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 297
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 335 EPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFDA 389
Query: 298 SDVS 301
SD+S
Sbjct: 390 SDLS 393
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + N+ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKNIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NALPVVNGITIKD 254
GG + +I VS++ M+N + G G P + K P P I +
Sbjct: 272 GGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSN 331
Query: 255 VWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ V S G I GL I NI++
Sbjct: 332 ITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 132/261 (50%), Gaps = 20/261 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN++ N + I++ V FQNSP WN+HP CS++ +R V + P + N DGID +
Sbjct: 216 FLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWYAQNGDGIDLE 275
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS+N IE+S GDD + +KSG DE G G P+ + +R G +GSE S
Sbjct: 276 SSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCVVYHAHGGFVIGSEMS 335
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GG +N+ + + VG+ KT GRGG ++NI V+++ M++ A+
Sbjct: 336 GGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDIGAEAILFDMYYMAKD 395
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ ++G+ D P + P A P I ++ + I+GL G+ L++
Sbjct: 396 PVALSGEKRDAPKVEVLPVTEATPQFKDFHISNIVCNGAATALFIRGLPEMNILGLYLND 455
Query: 282 INLQGVAGPTSPPLKCSDVSG 302
+ ++ G + C++ +G
Sbjct: 456 MVIKAKKG-----MVCTEATG 471
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGI YG PSS I IRRV G + SG+++GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 258 TKVQQSGLIQGLKNSPF 274
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 258 TKVQQSGLIQGLKNSPF 274
+++ +G + G++N+PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WWN +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WWN +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 137/304 (45%), Gaps = 32/304 (10%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNM-----------------------WRQRTLPFT-R 59
++ ++ GE G IDG G+ WW + FT R
Sbjct: 96 VADASNVTITGE-GVIDGGGSYWWEFVSLPPEEYPAELAERLEEIRRGNQQDEVSTFTVR 154
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 155 PPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSR 214
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G V
Sbjct: 215 FVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDV 274
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 239
+V + + GI +K+ GRGG + ++ + M I G D +
Sbjct: 275 RHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSEP 334
Query: 240 NP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 297
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 335 EPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFDA 389
Query: 298 SDVS 301
SD+S
Sbjct: 390 SDLS 393
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 131/271 (48%), Gaps = 18/271 (6%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRT--LPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R + L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNESDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NALPVVNGITIKD 254
GG + +I VS++ M+N + G G P + K P P I +
Sbjct: 272 GGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSN 331
Query: 255 VWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ V S G I GL I NI++
Sbjct: 332 ITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 134/271 (49%), Gaps = 16/271 (5%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
E IS G +G ++G G WW R L + RP LI F + + I +++ +NSP W
Sbjct: 150 LENISVTG-SGILEGNGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDIMLKNSPSW 208
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
I+P+ C NV I ++IL PADSPNTDGI+P+S SNV I + I GDD +A+K+G ++
Sbjct: 209 TINPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDT 268
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
ITI T G+ +GSE SG + NV + GI +K+ GR
Sbjct: 269 QERIA--CENITITNCTMVHGHGGVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGR 326
Query: 205 GGFIRNITVSDVYMENARKG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKD 254
GG I +I VS++ ME + + G DK+ NP + P I D
Sbjct: 327 GGIIEDIRVSNIVMEEVICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPCFRRIHFAD 386
Query: 255 VWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 284
+ +V +G + GL I SNI++
Sbjct: 387 ITARQVHAAAGFLYGLAEQYIAEITFSNIDI 417
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 155/321 (48%), Gaps = 48/321 (14%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPF 83
S++ I+ G GTIDG G W + FT RP LI M + +S++ + F
Sbjct: 639 SRYSNITITGA-GTIDGNGFSGWYLPPYLNGSFTNRPMLIAPMWVDGLYLSDLTLTDPAF 697
Query: 84 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 143
W + P +C NV I + I+ PNTDG+DPDS NV +E YISTGDD +A+KSG
Sbjct: 698 WTVAPAFCKNVHIHDLRIIT--SGPNTDGVDPDSCQNVLVERCYISTGDDCIAIKSGRGP 755
Query: 144 YGIAYGHPSSGITIRRV------------------------TGSSPFSGIAVGSETSGGV 179
+A P++ +TIR V T + GI++GSE SGG+
Sbjct: 756 QALAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTGHGISIGSEMSGGI 815
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD------VGD 233
+VL +++ L G+ VKT +GRGG +RN+T ++ +++ + I D VGD
Sbjct: 816 YDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTAVLINQDYNSVTCVGD 875
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 293
ALP + I +++V V+ + ++ L+++ G+ N+ + +
Sbjct: 876 ---------ALPNFSDILVQNVIANNVKMAFELECLQDNSCAGLRFENVTVTAFQNAS-- 924
Query: 294 PLKCSDVSGS-AYQVKPWPCS 313
KC+ V V P PC+
Sbjct: 925 --KCAHVQPEIGPNVSPVPCT 943
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NALPVVNGITIKD 254
GG + +I VS++ M+N + G G P + K P P I +
Sbjct: 272 GGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSN 331
Query: 255 VWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ V S G I GL I NI++
Sbjct: 332 ITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 139/299 (46%), Gaps = 44/299 (14%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWRQR------------ 53
E I+ GE GT+DGQG WW +W +
Sbjct: 122 ENITIKGE-GTLDGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLWERENDVEALYAETNE 180
Query: 54 ----TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
TL F RP I+ + R + I V NSPFW ++P +C NVV+ VTI S
Sbjct: 181 DWHGTLKRRFFRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGVTI-HNVPS 239
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 240 PNTDGINPESCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCTMLSGHG 299
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIK 226
G+ +GSE SG V V + GI +K+ GRGG + +I VS++ M N R+ +
Sbjct: 300 GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVV 359
Query: 227 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P + + P+ I+I + V+ I GL+ +P T I L +IN++
Sbjct: 360 LNLKYSEMPVEPMSERT-PLFRDISISGLTAVGVKTPVKIVGLEEAPVTDIILRDINVK 417
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 142/304 (46%), Gaps = 52/304 (17%)
Query: 28 EKISFIGENGTIDGQGAIWW----------------------NMWRQR------------ 53
E I+ GE GT+DGQG WW MW Q
Sbjct: 123 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQANDTTAIYAETNK 181
Query: 54 ----TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
TL F RP I+ + + + I V NSPFW ++P +C NV ++ VTI S
Sbjct: 182 DYIGTLQRRFFRPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVTI-HNVPS 240
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G G P ITI S
Sbjct: 241 PNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLSGHG 300
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---- 223
G+ +GSE SGGV V + GI +K+ GRGG + +I VS++ M N ++
Sbjct: 301 GVVIGSEMSGGVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVV 360
Query: 224 -GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+K +G + ++ P+ I I + T V+ I GL+ +P + I L +I
Sbjct: 361 LNLKYSGMPAEPKSER-----TPLFRNIHISGMTVTDVKTPVKIVGLEEAPISEIVLRDI 415
Query: 283 NLQG 286
++QG
Sbjct: 416 HVQG 419
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ NS+ ++ +FQNSP WNIHP ++++R VT+ P S N DG+D +
Sbjct: 229 FLRPVMVSIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQNGDGLDVE 288
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
NV +E+S GDD + +KSG D+ G+ G P I +R G+ VGSE S
Sbjct: 289 CCKNVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIVYHGHGGVTVGSEMS 348
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NARKGIKI 227
GGV+N+ + VG+ K+ GRGG + NI +SDV+M N G K
Sbjct: 349 GGVKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQAISFNLYYGGKS 408
Query: 228 AGDVGDHPDDKFNPNALPVV------NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ + DK A+PV I+IK++ QQ+ +QGL I +SN
Sbjct: 409 IAETLEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEISN 468
Query: 282 INLQGVAG 289
+ + G
Sbjct: 469 LTVTAEKG 476
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 147/310 (47%), Gaps = 52/310 (16%)
Query: 20 SDFLISKFEKISFIGENGTIDGQG-AIWWNMWR------------------------QRT 54
S F+ ++ ++ I GT+DGQG A W WR QR
Sbjct: 153 SSFIYARGQQDLAITGRGTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRL 212
Query: 55 L---PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
RPN+I+F + R+I++ ++ P W IHPV C NV +R V ++ + N+D
Sbjct: 213 FGDGHHLRPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSD 270
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+DP+ +S++ I T DD +AVKSG DE G G PS I IR S + G+AV
Sbjct: 271 GVDPECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWGGVAV 330
Query: 172 GSETSGGVENVLAEHINL--------YNVGVGIHVKTNIGRGG-----FIRNITVSDVYM 218
GSE SGGV +V AE + YN + +KTN RGG +IR T +
Sbjct: 331 GSEMSGGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDR 390
Query: 219 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 278
+ + AG G+ P V+ I I+D+ +++ ++GL + PFTG+
Sbjct: 391 DCVYLTTRYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVH 441
Query: 279 LSNINLQGVA 288
++ G+A
Sbjct: 442 IARCRFTGMA 451
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NALPVVNGITIKD 254
GG + +I VS++ M+N + G G P + K P P I +
Sbjct: 272 GGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSN 331
Query: 255 VWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ V S G I GL I NI++
Sbjct: 332 ITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NALPVVNGITIKD 254
GG + +I VS++ M+N + G G P + K P P I +
Sbjct: 272 GGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSN 331
Query: 255 VWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ V S G I GL I NI++
Sbjct: 332 ITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 139/301 (46%), Gaps = 42/301 (13%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNM-WRQRTLP------------------------ 56
LI + + GE G IDG G WW+ ++RT
Sbjct: 93 LLIENSDGLIVRGE-GIIDGNGQWWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGG 151
Query: 57 -------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 109
F RP L++ +NS ++ + + QNSPFW +HP+Y +N++ + +L P D+PN
Sbjct: 152 GGGRQSQFLRPPLVQILNSNNVKLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPN 211
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 169
TDGID DS V I+ + GDD +A+KSG G+A P++ I I T S G
Sbjct: 212 TDGIDVDSCRFVTIKKCLVDVGDDGIALKSGSGPDGVATNKPTTDILIEECTVKSAHGGA 271
Query: 170 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-- 227
+GSET+ G+ +V GI +KT GRGG I N+ S V M+N + +
Sbjct: 272 VIGSETAAGIRDVRVHDCLFDGTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNM 331
Query: 228 -----AGDVGDHPDDKFN-PNALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLS 280
+ D D +K + + P + G+TI+D + S I GL SP + +
Sbjct: 332 YYRCGSLDPQDFSLEKLSITDTTPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIR 391
Query: 281 N 281
N
Sbjct: 392 N 392
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 147/310 (47%), Gaps = 52/310 (16%)
Query: 20 SDFLISKFEKISFIGENGTIDGQG-AIWWNMWR------------------------QRT 54
S F+ ++ ++ I GT+DGQG A W WR QR
Sbjct: 138 SSFIYARGQQDLAITGRGTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRL 197
Query: 55 L---PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
RPN+I+F + R+I++ ++ P W IHPV C NV +R V ++ + N+D
Sbjct: 198 FGDGHHLRPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSD 255
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+DP+ +S++ I T DD +AVKSG DE G G PS I IR S + G+AV
Sbjct: 256 GVDPECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWGGVAV 315
Query: 172 GSETSGGVENVLAEHINL--------YNVGVGIHVKTNIGRGG-----FIRNITVSDVYM 218
GSE SGGV +V AE + YN + +KTN RGG +IR T +
Sbjct: 316 GSEMSGGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDR 375
Query: 219 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 278
+ + AG G+ P V+ I I+D+ +++ ++GL + PFTG+
Sbjct: 376 DCVYLTTRYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVH 426
Query: 279 LSNINLQGVA 288
++ G+A
Sbjct: 427 IARCRFTGMA 436
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NALPVVNGITIKD 254
GG + +I VS++ M+N + G G P + K P P I +
Sbjct: 272 GGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSN 331
Query: 255 VWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ V S G I GL I NI++
Sbjct: 332 ITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 140 bits (352), Expect = 1e-30, Method: Composition-based stats.
Identities = 93/281 (33%), Positives = 144/281 (51%), Gaps = 34/281 (12%)
Query: 37 GTIDGQGAIWWNMWRQRT--------------LP----------FTRPNLIEFMNSRSII 72
G IDG+G+ + W+ R +P + RP ++E +N ++
Sbjct: 148 GVIDGRGSHNFAHWKPRQKADQKALRRMGTDLVPVSDRLFGEGHYLRPAMLEPVNCTDVL 207
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I V F +SPFW IHP+ C NV +R VT+ + + N DG DP+S +NV IED TGD
Sbjct: 208 IEGVTFVDSPFWVIHPLACENVTVRGVTV--DSYNLNNDGCDPESCTNVLIEDCTFRTGD 265
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G P+ + IR + S +G+ +GSE SGGV NV+ E++ + +V
Sbjct: 266 DGIAIKSGRDNDAWRIGRPTENVLIRNCSFRSKANGVCIGSEISGGVRNVVVENVRMSDV 325
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPVVNGI 250
G GI+ K+N+ RGG+I ++ V V ++ RK + + PD K N G
Sbjct: 326 GNGIYFKSNLDRGGYIEDVFVCGVEADSVRKTLVLF-----EPDYKSESRENHPTAFRGF 380
Query: 251 TIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 290
I+DV ++G+ I+G + P + +S + L P
Sbjct: 381 VIEDVRAQWAGKAGIDIRGFADMPVRDVTISRLTLASTPEP 421
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 31/304 (10%)
Query: 6 MILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWR-------------- 51
+I W +F + + I+ G+ GTI+G G+ ++ W
Sbjct: 133 VITRWEGTELFNYSPLIYAYHVQNIALTGK-GTINGNGSKKFSAWADNQNIDKEILRRMG 191
Query: 52 QRTLPF----------TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 101
+ LP RP IE ++ I + ++SPFW IHP++C+NV++R VT+
Sbjct: 192 RENLPIYRRIFGEGFRLRPGFIEPYGCVNVRIEGITIKDSPFWVIHPIFCNNVIVRDVTV 251
Query: 102 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 161
+ + N DG DP+S SNV IE STGDD +A+KSG D G P+ + IR T
Sbjct: 252 --DSHNRNNDGCDPESCSNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCT 309
Query: 162 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 221
S +G+ +GSE SGGV NV E+I++ I+ K+N+ RGG+I NI V ++ ++
Sbjct: 310 FWSKINGVCIGSEISGGVRNVFIENISILKSSNAIYFKSNLDRGGYIENIYVRNIQADSV 369
Query: 222 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLS 280
R + F+P + N IT+++V + + + + G P I L
Sbjct: 370 RTALVRVEPNYKGERSGFHPT---LFNKITVENVTCGQTNECAISMAGFPELPIRNITLK 426
Query: 281 NINL 284
NI +
Sbjct: 427 NITV 430
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NALPVVNGITIKD 254
GG + +I VS++ M+N + G G P + K P P I +
Sbjct: 272 GGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSN 331
Query: 255 VWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ V S G I GL I NI++
Sbjct: 332 ITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 136/304 (44%), Gaps = 32/304 (10%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWW------------------------NMWRQRTLPFTR 59
++ ++ GE G IDG G+ WW N + + R
Sbjct: 133 VADASNVTITGE-GVIDGGGSYWWVFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVR 191
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 192 PPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSR 251
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G V
Sbjct: 252 FVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDV 311
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 239
+V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 312 RHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDP 371
Query: 240 NP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 297
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 372 KPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFDA 426
Query: 298 SDVS 301
SD+S
Sbjct: 427 SDLS 430
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 32/304 (10%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNM-----------------------WRQRTLPFT-R 59
++ ++ GE G IDG G+ WW + FT R
Sbjct: 133 VADASNVTITGE-GIIDGGGSYWWEFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVR 191
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 192 PPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSR 251
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G V
Sbjct: 252 FVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDV 311
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 239
+V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 312 RHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDP 371
Query: 240 NP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 297
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 372 KPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFDA 426
Query: 298 SDVS 301
SD+S
Sbjct: 427 SDLS 430
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 112/213 (52%), Gaps = 26/213 (12%)
Query: 37 GTIDGQGAIWWNMW---------RQRTL---------------PFTRPNLIEFMNSRSII 72
GTID QG + + W R R + RP+ I+ ++
Sbjct: 150 GTIDAQGGLEFAAWSKIEANDRDRLREMGDKLVPVHERIFGEGTVLRPSCIQPYGCSRVL 209
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I + ++SPFW IHPVYC NV++R VTI + PN DG DP+S++NV IE+ TGD
Sbjct: 210 IEGITVKDSPFWTIHPVYCDNVIVRGVTI--DSHFPNNDGCDPESTTNVLIENCTFRTGD 267
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G G PS I IR S +G+ +GSE SGG +V +I + V
Sbjct: 268 DAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHSECNGLCIGSEMSGGASDVYMNNIEIGTV 327
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
I+ K+N RGG+IRN+ V + +E A+ I
Sbjct: 328 KNAIYFKSNRDRGGYIRNVVVDSITVERAKGAI 360
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 18/236 (7%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP ++ ++I V NSPFW ++PV C++V++R VT + PN+DG DP+S
Sbjct: 239 RPPFVQPYECERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVT--CDSMGPNSDGCDPESC 296
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
V IED Y TGDD +A+KSG + G PS I IR G+ +GSE SGG
Sbjct: 297 DRVLIEDCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCHMRRGHGGVVIGSEMSGG 356
Query: 179 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDV 231
V NV EH +N ++ G+ +KTN RGG + N D+ + + I I GD
Sbjct: 357 VRNVFVEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVIDFQYEEGDA 416
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
G+H P+V I + + K ++ ++G + SP + + L N + + V
Sbjct: 417 GEH---------TPIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRNCDFKQV 463
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 125/238 (52%), Gaps = 12/238 (5%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F NS+ I I V NSPFW I+PV C NV I+ V I D N DGIDP+SS
Sbjct: 226 RPPFIQFYNSKDIRIMGVHIVNSPFWEINPVLCENVWIKGVHI--ETDLYNNDGIDPESS 283
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IED Y TGDD +A+KSG +E G G P++ + IR ++ GI +GSE SGG
Sbjct: 284 RNVLIEDCYFLTGDDCIAIKSGRNEDGRRIGVPTANVIIRHNRFANGHGGITLGSEISGG 343
Query: 179 VENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
V +V A H + N+ I KTN RGG + N+ V D + AR + A +
Sbjct: 344 VHDVFATGNHFDSPNLDYPIRFKTNAMRGGTLENVYVKDSVVNKARLAVVHADFFYEEGH 403
Query: 237 DKFNPNALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
N LP ++ IT+ W + + + ++G ++ + ++ L+GV G
Sbjct: 404 AGEN---LPQLDNITLDGFWTAEGGSIDAKYAFYLKGFADALIENVTFRDMKLEGVKG 458
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 32/304 (10%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNM-----------------------WRQRTLPFT-R 59
++ ++ GE G IDG G+ WW + FT R
Sbjct: 96 VADAANVTITGE-GVIDGGGSYWWEFVSVPPEQYPSELTERLEAIRSGNKQDAVSTFTVR 154
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 155 PPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSR 214
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G V
Sbjct: 215 FVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDV 274
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 239
+V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 275 RHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDP 334
Query: 240 NP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 297
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 335 EPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFDA 389
Query: 298 SDVS 301
SD+S
Sbjct: 390 SDLS 393
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNAL + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 258 TKVQQSGLIQGLKNSPF 274
+++ +G + G++N+PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 134/271 (49%), Gaps = 16/271 (5%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
E IS G +G ++G G WW R L + RP LI F + + I +V+ +NSP W
Sbjct: 99 LENISVTG-SGILEGNGQPWWEKHRNHPEDLQYPRPKLISFDRCQRVTIKDVMLKNSPSW 157
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
++P+ C NV I ++IL PADSPNTDGI+P+S SNV I + I GDD +A+K+G ++
Sbjct: 158 TVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDT 217
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
ITI T G+ +GSE SG + NV + GI +K+ GR
Sbjct: 218 QERIA--CENITITNCTMVHGHGGVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGR 275
Query: 205 GGFIRNITVSDVYMENARKG--IKIAGDVGDHPDDKF----NP----NALPVVNGITIKD 254
GG I +I VS++ ME + + G DK+ NP + P I D
Sbjct: 276 GGIIEDIRVSNIVMEEVICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPSFRRIHFSD 335
Query: 255 VWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 284
+ +V +G + GL I SNI++
Sbjct: 336 ITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN I+ + ++++ V SP W ++PV C+NV +R + I A N DGIDP+
Sbjct: 177 FLRPNFIQVIGCENVLVEGVTLLRSPMWEVNPVLCTNVTVRGIHISTKA--ANNDGIDPE 234
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS+ V IED+Y TGDD +A+KSG + G A PS I IR + GI +GSE S
Sbjct: 235 SSNYVLIEDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRNNIFADGHGGITIGSEVS 294
Query: 177 GGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---DV 231
GGV NV A+ N N+ + KTN RGG I NI + + +++ + A +
Sbjct: 295 GGVNNVFADNNQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLYEE 354
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
G H D +P ITI+++ T ++ ++ P TG+ + N+ L V P
Sbjct: 355 GRHGD------YMPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEVENP 407
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 140/300 (46%), Gaps = 36/300 (12%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNM------------W--------RQRTLP----- 56
F K E I+ G G IDG G WW+ W R+ LP
Sbjct: 132 FYAYKAENIAITGR-GIIDGHGKKWWDFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQ 190
Query: 57 ----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPNTD 111
F RP I+ M +++ I + +NSPFW ++P +C NV I VTI P +PNTD
Sbjct: 191 MKRGFLRPPFIQTMYCKNVFIEGITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTD 250
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
GI+P+S +NV I + +IS GDD + +KSG D G P+ TI T S G+ +
Sbjct: 251 GINPESCNNVHISNCHISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLSGHGGVVI 310
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 231
GSE SG V + + GI +K+ GRGG + I V ++ M+N ++ I D+
Sbjct: 311 GSEMSGDVRKISISNCVFDGTDRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQ-AIVLDL 369
Query: 232 GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
+ P P I ++ G +V ++ + GL+ P I ++IN++ G
Sbjct: 370 -QYAKTTLEPVSERTPRFRNIHFSNITG-QVNEAAYLNGLEEMPIENISFNDINMEAKTG 427
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 32/291 (10%)
Query: 28 EKISFIGENGTIDGQGAIWW------------NMWRQR-----------TLP------FT 58
E I G GT++G G WW + W++ LP F
Sbjct: 120 ENIRITGR-GTLNGNGKKWWAYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERGFL 178
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+ M +++ I + +NSPFW ++P +C NV I VTI P SPNTDGI+P+S
Sbjct: 179 RPPFIQPMYCKNVRIDGITIKNSPFWTVNPEFCDNVTIDGVTINNPP-SPNTDGINPESC 237
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
SNV I + +IS GDD + +KSG D G P+ TI T S G+ +GSE SG
Sbjct: 238 SNVHISNCHISVGDDCITIKSGKDRSGRKEARPAENYTITNCTMLSGHGGVVIGSEMSGD 297
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 238
V+ ++ + GI +KT GRGG + +I VS++ M+N ++ + D +
Sbjct: 298 VKKIVISNCIFDGTDRGIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAKTDRE 357
Query: 239 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
P + I + ++ + +Q+G + GL+ P + SN+ ++ G
Sbjct: 358 PVSERTPRFSNIHLSNITA-QGEQAGYLNGLEEMPIENVSFSNMVMETKTG 407
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGIVEDIRVSNIVMDN 287
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 28 EKISFIGENGTIDGQGAIWW----------------------NMWR-------------- 51
E I+ GE GT+DGQG WW +MW
Sbjct: 130 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNK 188
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A
Sbjct: 189 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNA 245
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 246 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 305
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 306 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 365
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 366 VVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 425
Query: 286 G 286
G
Sbjct: 426 G 426
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWR-------------- 51
E I+ GE GT+DGQG WW MW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNK 179
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV+I+ +TI A
Sbjct: 180 DYVTTLQRR--FFRPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIKGITI-DNA 236
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 237 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 296
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 297 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 356
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 357 VVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ 416
Query: 286 G 286
G
Sbjct: 417 G 417
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 28 EKISFIGENGTIDGQGAIWW----------------------NMWR-------------- 51
E I+ GE GT+DGQG WW +MW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNK 179
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A
Sbjct: 180 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNA 236
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 237 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 296
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 297 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 356
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 357 VVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 416
Query: 286 G 286
G
Sbjct: 417 G 417
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGNVEDIRVSNIVMDN 287
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG G WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMEN 220
GG + +I VS++ M+N
Sbjct: 272 GGNVEDIRVSNIVMDN 287
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 42/299 (14%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWRQR------------ 53
E I+ GE GT+DGQG WW MW +
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNK 179
Query: 54 ----TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
TL F RP I+ + + + I V NSPFW ++P +C NV I+ +TI S
Sbjct: 180 DYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPS 238
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 239 PNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG 298
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
G+ +GSE SG V V + GI +K+ GRGG + +I VS++ M N ++ +
Sbjct: 299 GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVV 358
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 359 LNLKYSQMPAEAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 136/304 (44%), Gaps = 32/304 (10%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNM-----------------------WRQRTLPFT-R 59
++ ++ GE G IDG G+ WW + FT R
Sbjct: 89 VADAANVTITGE-GVIDGGGSYWWEFVSVPPEEYPPALAERLAEIRSGNKQDAVSTFTVR 147
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L++ ++ +S V +NSPFWN H VY +V + V+I P D+PN DGID DSS
Sbjct: 148 PPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSEDVTVHDVSIQNPPDAPNGDGIDIDSSR 207
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G V
Sbjct: 208 FVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDV 267
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 239
+V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 268 RHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDP 327
Query: 240 NP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 297
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 328 EPVTEATPNVRNVDFHHITAEEVESAAFLAGLPERRFEGISFTDVDIDA-----TRPFDA 382
Query: 298 SDVS 301
SD+S
Sbjct: 383 SDLS 386
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 137/301 (45%), Gaps = 46/301 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWR-------------- 51
E I+ GE GT+DGQG WW MW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNK 179
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C+NV I+ +TI A
Sbjct: 180 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCNNVTIKGITI-DNA 236
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 237 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 296
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 297 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 356
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 357 VVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 416
Query: 286 G 286
G
Sbjct: 417 G 417
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 137/302 (45%), Gaps = 48/302 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWR-------------- 51
E I+ GE GT+DGQG WW MW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNK 179
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + I I V NSPFW ++P +C NV I+ +TI
Sbjct: 180 DYVSTLQRR--FFRPPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNV 236
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 237 PSPNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 296
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKG 224
G+ +GSE SG V V + GI +K+ GRGG + +I VS++ M N R+
Sbjct: 297 HGGVVIGSEMSGSVRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKREA 356
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
+ + P + P+ + I + T V+ I GL+ +P + I L +I++
Sbjct: 357 VVLNLKYSKMPAEP-KSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI 415
Query: 285 QG 286
QG
Sbjct: 416 QG 417
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 136/301 (45%), Gaps = 46/301 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWR-------------- 51
E I+ GE GT+DGQG WW MW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNK 179
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A
Sbjct: 180 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNA 236
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 237 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 296
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 297 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 356
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 357 VVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 416
Query: 286 G 286
G
Sbjct: 417 G 417
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 4/186 (2%)
Query: 37 GTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
GTIDGQG WW+++R L + RP LI F + + I + +V NSP W ++P+ C ++
Sbjct: 105 GTIDGQGQKWWDVFRNHPEQLEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDI 164
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
+ + I PADSPNTDGIDP+S NV I + I GDD +A+KSG +E
Sbjct: 165 TVDNIKIKNPADSPNTDGIDPESCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CEN 222
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 214
ITI G+ +GSE SG + NV + + GI +K+ GRGG I +I V+
Sbjct: 223 ITISNCQMLHGHGGVVLGSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVN 282
Query: 215 DVYMEN 220
++ M+N
Sbjct: 283 NLIMDN 288
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 132/301 (43%), Gaps = 42/301 (13%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMWRQ----------------------------- 52
IS+ ++ G G IDG G WW R+
Sbjct: 93 LFISESHDVTVTG-TGVIDGSGKSWWESARRKRALHMKPETPMEKKLAALNPGYADQPGG 151
Query: 53 ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 109
R F RP L++ ++S + + V SPFW +HPV+ S + R V I+ PAD+PN
Sbjct: 152 GGGRQCQFLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKIINPADAPN 211
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 169
TDGID DS +V + + GDD +A+KSG GIA G P+ + + T S GI
Sbjct: 212 TDGIDIDSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTVRSAHGGI 271
Query: 170 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN--ARKGIKI 227
+GSET+ G+ ++AE GI +KT GRGG I ++ + M N I +
Sbjct: 272 VIGSETAAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNLCPLAINM 331
Query: 228 AGDVGDHPDDKFN------PNALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLS 280
G F+ + P + I ++D T Q S G I GL P T + +
Sbjct: 332 YYRCGTTEGSLFSLSPEPIDDTTPSIGNILVRDCVATGSQASAGFIVGLPERPITELVVE 391
Query: 281 N 281
+
Sbjct: 392 D 392
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 129/271 (47%), Gaps = 18/271 (6%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E IS G GT+DG WW+ +R L + RP L+ F N I + ++ SP W
Sbjct: 96 ENISVTG-FGTLDGNEKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWT 154
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
I+P+ CSN +TIL PADSPNTDGIDP+S NV I + +I GDD +A+K+G ++
Sbjct: 155 INPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-- 212
Query: 146 IAYGH-PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
Y ITI T G+ +GSE SG + N+ + GI +K+ GR
Sbjct: 213 -TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGR 271
Query: 205 GGFIRNITVSDVYMENARKGIKI-----AGDVGDHP---DDKFNP--NALPVVNGITIKD 254
GG + +I VS++ M+N + G G P + K P P I +
Sbjct: 272 GGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSN 331
Query: 255 VWGTKVQQS-GLIQGLKNSPFTGICLSNINL 284
+ V S G I GL I NI++
Sbjct: 332 ITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 4/186 (2%)
Query: 37 GTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
GTIDGQG WW+++R L + RP LI F + + I + +V NSP W ++P+ C ++
Sbjct: 105 GTIDGQGQKWWDVFRNHPEQLEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDI 164
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
+ + I PADSPNTDGIDP+S NV I + I GDD +A+KSG +E
Sbjct: 165 TVDNIKIKNPADSPNTDGIDPESCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CEN 222
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 214
ITI G+ +GSE SG + NV + + GI +K+ GRGG I +I V+
Sbjct: 223 ITISNCQMLHGHGGVVLGSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVN 282
Query: 215 DVYMEN 220
++ M+N
Sbjct: 283 NLIMDN 288
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 140/299 (46%), Gaps = 46/299 (15%)
Query: 30 ISFIGENGTIDGQGAIWWNMWRQ-----RTLP---------------------------- 56
I+ GE G IDG GA WW + Q RT P
Sbjct: 96 ITIDGE-GIIDGNGAWWWRTFAQIERTDRTQPQEDYELELARLNPDYKERAGGGARPSTQ 154
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP LI+F ++ + + QNSPFW IH VYC+ V I VT+ PA++ NTD +D D
Sbjct: 155 FLRPPLIQFWKCTAVKLKGITVQNSPFWTIHFVYCTQVTIDGVTVRNPANAINTDALDID 214
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS+NV + +S GDD + +KSG G+ P++ + ++ T + GIA+GSET+
Sbjct: 215 SSTNVAVSNSLFDVGDDAITLKSGSGPDGLRVNKPTAHVNVKDCTILASHGGIAIGSETA 274
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA-----GDV 231
GG+ +V E GI +K+ GRGG I+ IT+ + M++ I + G +
Sbjct: 275 GGINDVNVEKCTFSGTQRGIRLKSRRGRGGTIKGITLRHLEMDHCWCPIVLGMYFAPGVL 334
Query: 232 GDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNIN 283
D + +A PV + I I+DV V+ + I GL SP + +
Sbjct: 335 PQEEDYVLSKSAQPVEATTPHIRNIRIEDVRADNVRSTAAFIVGLPESPIENVSIDQFE 393
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 136/301 (45%), Gaps = 46/301 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWR-------------- 51
E I+ GE GT+DGQG WW MW
Sbjct: 96 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNK 154
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A
Sbjct: 155 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNA 211
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 212 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 271
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 272 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 331
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 332 VVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 391
Query: 286 G 286
G
Sbjct: 392 G 392
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 142/342 (41%), Gaps = 44/342 (12%)
Query: 16 FRFLSDFLISKFEKISFIGENGTIDGQGAIWW-------------NMWRQ-RTLP----- 56
+R + D+ +++ I G +D +WW + R+ T P
Sbjct: 141 WRPVKDWKMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAKVAQLKREGSTDPKDYEA 200
Query: 57 ---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 113
+ RPNL+ + +++ FQNSP WN+HP C +V +R VT+ P N DG+
Sbjct: 201 ARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGL 260
Query: 114 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
D DS +ED GDD + +KSG DE G A G P I IR G +GS
Sbjct: 261 DLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCRVYHGHGGFVIGS 320
Query: 174 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------------- 220
E SGGV + E +G+ K+ GRGG + +I + + M +
Sbjct: 321 EMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFYE 380
Query: 221 ARKGIKIAGDVGDHPDDKFNPNAL--PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 278
++G +AG + P ++ P+ GITI+DV + + LI GL P G+
Sbjct: 381 GKEGSGVAG-------ENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLV 433
Query: 279 LSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 320
+ N G + + V+ P L +Q
Sbjct: 434 VENFTASAKRGGVCTNAQNLTLKDVTLHVEQGPVVSLRHAQH 475
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 136/302 (45%), Gaps = 48/302 (15%)
Query: 28 EKISFIGENGTIDGQGAIWW---------------------------------------- 47
E I+ GE GT+DGQG WW
Sbjct: 131 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNK 189
Query: 48 ---NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 104
N ++R F RP I+ + + + I V NSPFW ++P +C NV I+ +TI
Sbjct: 190 DYVNTLQRR---FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DN 245
Query: 105 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 164
A SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 246 APSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 305
Query: 165 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 306 GHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQE 365
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
+ + P+ + I + T V+ I GL+ +P + I L +I++
Sbjct: 366 AVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 425
Query: 285 QG 286
QG
Sbjct: 426 QG 427
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 12/237 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP L++F R I + ++ QNSPFW H VY ++++R V IL PAD+ NTD +D D
Sbjct: 178 FLRPPLLQFWKCRHIRLEDITLQNSPFWTCHTVYSRDIILRGVKILNPADAINTDAVDLD 237
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS ++ IE GDD V +KSG G+ P+ G+T+ + GIA+GSET+
Sbjct: 238 SSEDIVIEHCLFDVGDDAVTLKSGSGADGLRINLPTRGVTVSHCKILASHGGIAIGSETA 297
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA-----GDV 231
GG+E+V I +K+ GRGG I+NIT+S++ M I I G +
Sbjct: 298 GGIEDVTVNDCVFEGTQRAIRLKSRRGRGGTIKNITLSNLTMTGCWCPIVIGQYFAPGVL 357
Query: 232 GDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 281
D + A PV + + I V T ++ + I GL +P + + N
Sbjct: 358 PAERDTTLSETAQPVTPMTPRIENVRIAHVQATDIRATAAFIVGLPEAPIQRVTIEN 414
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 136/302 (45%), Gaps = 48/302 (15%)
Query: 28 EKISFIGENGTIDGQGAIWW---------------------------------------- 47
E I+ GE GT+DGQG WW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNK 179
Query: 48 ---NMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 104
N ++R F RP I+ + + + I V NSPFW ++P +C NV I+ +TI
Sbjct: 180 DYVNTLQRR---FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DN 235
Query: 105 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 164
A SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 236 APSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
Query: 165 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 296 GHGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQE 355
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
+ + P+ + I + T V+ I GL+ +P + I L +I++
Sbjct: 356 AVVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 415
Query: 285 QG 286
QG
Sbjct: 416 QG 417
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 19/253 (7%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN ++ F RP ++ +N +++++ +VIFQNSP WNIHP+ C NV+I V P+
Sbjct: 222 WNAIKR----FLRPVMVSLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVLARNPSY 277
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
+ N D +D +S NV + +S GDD + +KSG DE G G P + + T +
Sbjct: 278 AQNGDALDLESCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCTVFAGH 337
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK--- 223
G VGSE SGGV N+L + VG+ K+ GRGG + NI + D+ M + +
Sbjct: 338 GGFVVGSEMSGGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIKTDAI 397
Query: 224 ------GIKIAGDV---GDHPDDKFN---PNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
G K ++ GD+PD+ P+ I I+++ ++ GL
Sbjct: 398 TFNMYYGGKSVAEMLADGDNPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAMEFNGLPE 457
Query: 272 SPFTGICLSNINL 284
P I L N+++
Sbjct: 458 MPIENINLENVHI 470
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 146/345 (42%), Gaps = 50/345 (14%)
Query: 16 FRFLSDFLISKFEKISFIGENGTIDGQGAIWW-------------NMWRQ-RTLP----- 56
+R + D+ +++ I G +D +WW + R+ T P
Sbjct: 141 WRPVKDWKMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAKVAQLKREGSTDPKDYEA 200
Query: 57 ---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 113
+ RPNL+ + +++ FQNSP WN+HP C +V +R VT+ P N DG+
Sbjct: 201 ARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGL 260
Query: 114 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
D DS +ED GDD + +KSG DE G G P I IR G +GS
Sbjct: 261 DLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCRVYHGHGGFVIGS 320
Query: 174 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------------- 220
E SGGV + E +G+ K+ GRGG + +I + + M +
Sbjct: 321 EMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFYE 380
Query: 221 ARKGIKIAGDVGDHPDDKFNPNAL--PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 278
++G +AG + P ++ P+ GITI+DV + + LI GL P G+
Sbjct: 381 GKEGSGVAG-------ENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLV 433
Query: 279 LSNINL---QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 320
+ N +GV + L DV+ V+ P L +Q
Sbjct: 434 VENFTASAKRGVVCTNAQNLTLKDVT---LHVEQGPVVSLRHAQH 475
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 42/299 (14%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWRQR------------ 53
E I+ GE GT+DGQG WW MW +
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNK 179
Query: 54 ----TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
TL F RP I+ + + + I V NSPFW ++P +C NV I+ +TI S
Sbjct: 180 DYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPS 238
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 239 PNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG 298
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
G+ +GSE SG V V + GI +K+ GRGG + +I VS++ M N ++ +
Sbjct: 299 GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVV 358
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ P+ + I + T V+ I GL+ +P I L +I++QG
Sbjct: 359 LNLKYSQMPAEAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPIFDIVLRDIHIQG 417
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 4/262 (1%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RPN + F N R++++ P W IHPVY N++IR V +L + PN DGIDPDS
Sbjct: 202 RPNFVVFFNCRNVLMEGFTIGGGPNWTIHPVYSENIIIRRVHVLT--EGPNNDGIDPDSC 259
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IE TGDD V +KSG++E G P+ + +R + + G+ VGSE SG
Sbjct: 260 RNVLIEHCVFDTGDDCVVLKSGYNEDGWRVARPTENVVMRWCSSARGHGGLVVGSEMSGD 319
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG-DVGDHPDD 237
V NV + + +K+ GRGG + NI ++ + + ++ + I D G +
Sbjct: 320 VRNVYMHDCDFAGTDRAVRIKSRRGRGGVVENIWAENLRVRDMQQEVVILNMDYGADRNQ 379
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 297
F P+ I ++ V + I GL +SP + ++ +Q G + ++
Sbjct: 380 AFTEKP-PLFRNIHVRRVTADGAPAAIRIAGLADSPIEHVTFEDLTIQSTRGVIAQHVRG 438
Query: 298 SDVSGSAYQVKPWPCSELSSSQ 319
+ A + P EL+ +Q
Sbjct: 439 LTFANVAIGPRIGPVFELTDAQ 460
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 141/303 (46%), Gaps = 52/303 (17%)
Query: 28 EKISFIGENGTIDGQGAIWWNMW-----------------------RQRTLP-------- 56
E I+ GE GT+DGQG WW + ++ L
Sbjct: 124 ENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNE 182
Query: 57 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
F RP I + +++ + V NSPFW ++P +C NV I+ +TI S
Sbjct: 183 DWHGTLDRRFFRPPFIHPIRCKNVRVEGVTIINSPFWTVNPEFCDNVTIKGITI-HNVPS 241
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG 301
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---- 223
G+ +GSE SGGV+ V + GI +K+ GRGG + +I VS++ M N +K
Sbjct: 302 GVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIV 361
Query: 224 -GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+K + + D+ V+G+T++D V ++ GL +P TGI + ++
Sbjct: 362 LNLKYSKMPAEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDV 416
Query: 283 NLQ 285
+Q
Sbjct: 417 YIQ 419
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 8/187 (4%)
Query: 37 GTIDGQGAIWWNMWRQR--TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
GTIDG G WW+++R R L + RP LI F + I + +V NSP W ++P+ C ++
Sbjct: 106 GTIDGNGMEWWDVFRNRREELKYPRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDI 165
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD--EYGIAYGHPS 152
+ V+IL PADSPNTDGIDP+S NV I + +I GDD +A+KSG + E +A
Sbjct: 166 TVDNVSILNPADSPNTDGIDPESCRNVRISNCHIDVGDDCIAIKSGTEDTEERVA----C 221
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
ITI T + GSE SG + NV + + GI K+ GRGG + ++
Sbjct: 222 ENITITNCTMVHGHGAVVFGSEMSGDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVR 281
Query: 213 VSDVYME 219
V ++ ME
Sbjct: 282 VDNIVME 288
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 136/301 (45%), Gaps = 46/301 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWR-------------- 51
E I+ GE GT+DGQG WW MW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNK 179
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A
Sbjct: 180 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNA 236
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 237 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 296
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 297 HGGVVIGSEMSGSVCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 356
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 357 VVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 416
Query: 286 G 286
G
Sbjct: 417 G 417
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 121/253 (47%), Gaps = 15/253 (5%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RPNL+ N + I++ V FQNSP WN+HP+ C ++ +R + + P + N D
Sbjct: 218 QSIKDFLRPNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWFAQNGD 277
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S NV IE S GDD + +KSG DE G G P+ + IR G V
Sbjct: 278 GVDVESCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRNNVVYHAHGGFVV 337
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN----------- 220
GSE SGG +N+ + +GI KT GRGG + +I ++++ M +
Sbjct: 338 GSEMSGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINMIDIPGEAILFDMY 397
Query: 221 --ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 276
A I +AG+ + P A P I IKDV +++ ++GL
Sbjct: 398 YAAVDPIVLAGEKREAIKTVVVPVTEATPQFKNIYIKDVVANGAEKAIFVRGLPEMNIKD 457
Query: 277 ICLSNINLQGVAG 289
I L N+ +Q G
Sbjct: 458 IYLENVTIQAKKG 470
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 141/303 (46%), Gaps = 52/303 (17%)
Query: 28 EKISFIGENGTIDGQGAIWWNMW-----------------------RQRTLP-------- 56
E I+ GE GT+DGQG WW + ++ L
Sbjct: 124 ENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNE 182
Query: 57 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
F RP I + +++ + V NSPFW ++P +C NV I+ +TI S
Sbjct: 183 DWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPS 241
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG 301
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---- 223
G+ +GSE SGGV+ V + GI +K+ GRGG + +I VS++ M N +K
Sbjct: 302 GVVIGSEMSGGVKKVTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIV 361
Query: 224 -GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+K + + D+ V+G+T++D V ++ GL +P TGI + ++
Sbjct: 362 LNLKYSKMPAEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDV 416
Query: 283 NLQ 285
+Q
Sbjct: 417 YIQ 419
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 132/295 (44%), Gaps = 42/295 (14%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWRQ----RTL------ 55
E I+ GE G +DGQG WW ++ Q +TL
Sbjct: 120 ENITIKGE-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNV 178
Query: 56 --------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
F RP I+ + R++ I + NSPFW ++P +C NV ++ VTI S
Sbjct: 179 DWHSTLDRRFLRPPFIQLLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPS 237
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S SNV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 238 PNTDGINPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHG 297
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
G+ +GSE SGGV+ V + GI +K+ GRGG + +I VS+V M + ++ +
Sbjct: 298 GVVIGSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVV 357
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+ PV I + + Q + GL +P GI +I
Sbjct: 358 LNLKYSQMKMEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDI 412
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 136/300 (45%), Gaps = 46/300 (15%)
Query: 28 EKISFIGENGTIDGQGAIWW----------------------NMWR-------------- 51
E I+ GE GT+DGQG WW +MW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNK 179
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A
Sbjct: 180 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNA 236
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 237 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 296
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 297 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 356
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 357 VVLNLKYSKMPVEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 416
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 141/303 (46%), Gaps = 52/303 (17%)
Query: 28 EKISFIGENGTIDGQGAIWWNMW-----------------------RQRTLP-------- 56
E I+ GE GT+DGQG WW + ++ L
Sbjct: 124 ENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNE 182
Query: 57 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
F RP I + +++ + V NSPFW ++P +C NV I+ +TI S
Sbjct: 183 DWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPS 241
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG 301
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---- 223
G+ +GSE SGGV+ V + GI +K+ GRGG + +I VS++ M N +K
Sbjct: 302 GVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIV 361
Query: 224 -GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+K + + D+ V+G+T++D V ++ GL +P TGI + ++
Sbjct: 362 LNLKYSKMPAEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDV 416
Query: 283 NLQ 285
+Q
Sbjct: 417 YIQ 419
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 141/303 (46%), Gaps = 52/303 (17%)
Query: 28 EKISFIGENGTIDGQGAIWWNMW-----------------------RQRTLP-------- 56
E I+ GE GT+DGQG WW + ++ L
Sbjct: 124 ENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNE 182
Query: 57 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
F RP I + +++ + V NSPFW ++P +C NV I+ +TI S
Sbjct: 183 DWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPS 241
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG 301
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---- 223
G+ +GSE SGGV+ V + GI +K+ GRGG + +I VS++ M N +K
Sbjct: 302 GVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIV 361
Query: 224 -GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+K + + D+ V+G+T++D V ++ GL +P TGI + ++
Sbjct: 362 LNLKYSKMPAEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDV 416
Query: 283 NLQ 285
+Q
Sbjct: 417 YIQ 419
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 141/303 (46%), Gaps = 52/303 (17%)
Query: 28 EKISFIGENGTIDGQGAIWWNMW-----------------------RQRTLP-------- 56
E I+ GE GT+DGQG WW + ++ L
Sbjct: 124 ENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNE 182
Query: 57 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
F RP I + +++ + V NSPFW ++P +C NV I+ +TI S
Sbjct: 183 DWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPS 241
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG 301
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---- 223
G+ +GSE SGGV+ V + GI +K+ GRGG + +I VS++ M N +K
Sbjct: 302 GVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIV 361
Query: 224 -GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+K + + D+ V+G+T++D V ++ GL +P TGI + ++
Sbjct: 362 LNLKYSKMPAEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDV 416
Query: 283 NLQ 285
+Q
Sbjct: 417 YIQ 419
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 147/312 (47%), Gaps = 35/312 (11%)
Query: 6 MILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQ---------RTLP 56
+I W +F + + I+ GE GT++G G+ ++ W R +
Sbjct: 123 VITRWEGTELFNYSPLIYAYHVQNIALTGE-GTVNGNGSKKFSPWNNIQTVEQEMLRKMG 181
Query: 57 FT---------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 101
T RP IE ++ I V +SPFW IHP++CSNV++R VT+
Sbjct: 182 RTNVPVYRRVFGEGYKLRPGFIEPFGCANVRIEGVTIIDSPFWVIHPIFCSNVIVRNVTV 241
Query: 102 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 161
+ + N DG DP+S NV IE STGDD +A+KSG D G P+ + IR +
Sbjct: 242 --DSHNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCS 299
Query: 162 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 221
S +G+ +GSE +GGV N+ E+I + I+ K+N+ RG +I+++ V +V +
Sbjct: 300 FRSKINGVCIGSEIAGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTV 359
Query: 222 RKGIKIAGDVGDHPDDKFNPNAL--PVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGIC 278
R + + P+ K +A + N I++V + + G+ + G P I
Sbjct: 360 RTAL-----IRFEPNYKGERSAFHPTLFNSFLIENVTCKQSNECGIYMAGFAERPLQNIV 414
Query: 279 LSNINLQGVAGP 290
L N+ + V P
Sbjct: 415 LKNVTIGKVPTP 426
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 141/303 (46%), Gaps = 52/303 (17%)
Query: 28 EKISFIGENGTIDGQGAIWWNMW-----------------------RQRTLP-------- 56
E I+ GE GT+DGQG WW + ++ L
Sbjct: 124 ENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNE 182
Query: 57 ---------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
F RP I + +++ + V NSPFW ++P +C NV I+ +TI S
Sbjct: 183 DWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPS 241
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG 301
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---- 223
G+ +GSE SGGV+ V + GI +K+ GRGG + +I VS++ M N +K
Sbjct: 302 GVVIGSEMSGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIV 361
Query: 224 -GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+K + + D+ V+G+T++D V ++ GL +P TGI + ++
Sbjct: 362 LNLKYSKMPAEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDV 416
Query: 283 NLQ 285
+Q
Sbjct: 417 YIQ 419
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 121/238 (50%), Gaps = 9/238 (3%)
Query: 53 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 112
R F RP L++ +S I++ + ++SPFW +HP+Y N+V + ++I P ++PNTDG
Sbjct: 155 RQSQFLRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLVFKNLSIKNPKNAPNTDG 214
Query: 113 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 172
ID DS NV IE I GDD +A+KSG GI G P+ + I + T + G +G
Sbjct: 215 IDLDSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCTVRNAHGGAVIG 274
Query: 173 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN--ARKGIKIAGD 230
SET+ G+ NV + GI +KT GRGG I +++ + M I +
Sbjct: 275 SETAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLCPLTINLYYR 334
Query: 231 VGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 281
G ++ F+ LPV V+ I I D S I GL SP TG+C+ +
Sbjct: 335 CGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVGCLSSIAFIVGLPESPITGLCIED 392
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 116/235 (49%), Gaps = 33/235 (14%)
Query: 19 LSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQ-------------------------- 52
+ ++S K I GT++G G WWN+ +
Sbjct: 90 MHPLVLSSHTKNVRITGKGTLNGNGETWWNLKKAKKERGQSAPEDMYEKILAELNPGYEN 149
Query: 53 -------RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
R + F RP+L+E + ++ + + ++SPFW +HP+Y N+ +R + I P
Sbjct: 150 QPGGGGGREIQFLRPSLLEISFAENVSVEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPY 209
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
+PNTDGID DS NV IED ++S GDD + +KSG GI P+ + IR T +
Sbjct: 210 TAPNTDGIDVDSCENVVIEDCFVSVGDDGICIKSGSGPDGIRCAKPTVNVEIRNCTVRNA 269
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GI +GSET+ G+ ++ A +L GI +K+ GRGG I +I + D+ M N
Sbjct: 270 HGGIVIGSETAAGMSHIHAVGCDLSGTDRGIRIKSRRGRGGDIFDIELRDMVMNN 324
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP L+ NS+ ++ +FQNSP WNIHP+ ++++R VT+ P S N DG+D +
Sbjct: 231 FLRPVLVSIQNSKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQNGDGLDVE 290
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV +E+S GDD + +KSG D+ G G P I ++ G+ VGSE S
Sbjct: 291 SCKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKNNIVYHGHGGVTVGSEMS 350
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GGV+N+ + + VG+ K+N GRGG + NI +SD+YM + +
Sbjct: 351 GGVKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAISFDLYYGGKS 410
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ + G+ K P P I+IK+V QQ+ +QGL I ++N
Sbjct: 411 IAETLAEGGNTVSSKKVPVDEKTPQFKNISIKNVTIAGAQQAVFLQGLPEMNLENIEITN 470
Query: 282 INLQGVAG 289
+ + G
Sbjct: 471 LIAKAEKG 478
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 144/310 (46%), Gaps = 55/310 (17%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWR--------------------------------- 51
+K + I+ GE G IDG G+ WW
Sbjct: 142 TKLDDIAIAGE-GIIDGAGSGWWAKSDKAAERAAAAAKAGESASTKPADSTSPKSEKPAP 200
Query: 52 -QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 110
++ L RP LI + + + V +NSP ++ P +C +VV+ VTI +PAD+PNT
Sbjct: 201 PEKPLYVPRPFLITLRDCARVHLQGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNT 260
Query: 111 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI---RRVTGSSPFS 167
DGIDP +S +V I I TGDD +AVK G G+A P+ +T+ + + G
Sbjct: 261 DGIDPANSRDVLIRRCTIDTGDDNIAVKGG----GVA-NEPTENVTVTDCKFLHG----H 311
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
G+++GSET GV N L + N G + +K++ RGG + N+ D+ M+N I I
Sbjct: 312 GVSIGSETEAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITI 371
Query: 228 -----AGDVGDHPDDKFNPNALPVVNGITIKDV--WGTKVQQSGLIQGLKNSPFTGICLS 280
HP+ P+V IT + + GT +++G + GL SP + +
Sbjct: 372 FLFYDDKKAAAHPELAPVTKQTPMVRNITFQKIVCHGT-TRKAGELVGLPESPISDVVFD 430
Query: 281 NINLQGVAGP 290
++++ G A P
Sbjct: 431 DVHIDGAAAP 440
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 135/299 (45%), Gaps = 42/299 (14%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWRQR------------ 53
E I+ GE GT+DGQG WW MW +
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAQNDTTAIYAETNK 179
Query: 54 ----TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
TL F RP I+ + + + I V NSPFW ++P +C NV I+ +TI S
Sbjct: 180 DYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPS 238
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T +
Sbjct: 239 PNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLAGHG 298
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
G+ +GSE SG V V + GI +K+ GRGG + +I VS++ M N ++ +
Sbjct: 299 GVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVV 358
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ P+ + I + T + I GL+ +P + I L +I++QG
Sbjct: 359 LNLKYSQMPAEAKSERTPIFRNVHISGMTVTDAKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 139/306 (45%), Gaps = 56/306 (18%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWRQR------------ 53
E I+ GE GT+DGQG WW MW
Sbjct: 114 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMHDLNKYQPMWDAENDTTAIYTETNK 172
Query: 54 ----TLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
TL F RP I+ + + + I V NSPFW ++P +C NV I+ +TI S
Sbjct: 173 DYVSTLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPS 231
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 232 PNTDGINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG 291
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
G+ +GSE SG V V + GI +K+ GRGG + +I VS++ M N ++ +
Sbjct: 292 GVVIGSEMSGSVRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVV 351
Query: 228 AGDVGDHPDDKFNP-------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 280
+ K++P P+ + I + T V+ I GL+ +P + I L
Sbjct: 352 L-------NLKYSPMPAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLR 404
Query: 281 NINLQG 286
+I++QG
Sbjct: 405 DIHIQG 410
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 136/300 (45%), Gaps = 46/300 (15%)
Query: 28 EKISFIGENGTIDGQGAIWW----------------------NMWR-------------- 51
E I+ GE GT+DGQG WW +MW
Sbjct: 130 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNK 188
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A
Sbjct: 189 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNA 245
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 246 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 305
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 306 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 365
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 366 VVLNLKYSKMPVEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 425
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 135/300 (45%), Gaps = 46/300 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWR-------------- 51
E I+ GE GT+DGQG WW MW
Sbjct: 121 ENITIKGE-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNK 179
Query: 52 ------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
QR F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A
Sbjct: 180 DYVNTLQRR--FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNA 236
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
SPNTDG++P+S NV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 237 PSPNTDGVNPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG 296
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SG V V + GI +K+ GRGG + +I VS+V M N ++
Sbjct: 297 HGGVVIGSEMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEA 356
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ + P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 357 VVLNLKYSKMPAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 416
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 15/253 (5%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RPNL+ + +++ V FQNSP W +HP+ N+ +R V + P + N D
Sbjct: 209 QSVKDFFRPNLVVLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGD 268
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
GID +S SNV IE+S GDD + +KSG D G P+ + IR T + G V
Sbjct: 269 GIDLESCSNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCTVYAAHGGFVV 328
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN----------- 220
GSE SGGV NV + +G+ KT GRGG + NI + D++M++
Sbjct: 329 GSEMSGGVNNVYVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMKDIPGDAVLFDMY 388
Query: 221 --ARKGIKIAGDVGDHPD-DKFNPN-ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 276
A+ I +AG+ + P +K + P I I +++ Q++ ++GL
Sbjct: 389 YMAKDPIALAGEKRELPKVEKLAVDETTPQFRNIQISNIYVNGAQRAVFLRGLPEMAVKN 448
Query: 277 ICLSNINLQGVAG 289
I +SN Q G
Sbjct: 449 ISISNAVFQSKQG 461
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 52 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 169 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V +V + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV- 379
Query: 227 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 268
+ ++ +K + N PVV I + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRNFPPVVRHIYLDNVTSEKSKYGVLITG 421
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 136/304 (44%), Gaps = 44/304 (14%)
Query: 30 ISFIGENGTIDGQGAIWWN---------------------MWRQRTLP-----------F 57
+S IG +G IDGQG WW + + T P F
Sbjct: 101 VSIIG-SGCIDGQGEAWWEVNHLLRKGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQF 159
Query: 58 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 117
RP L++ + S+ + + +NSPFWN H VYC NV I V P D+PN DG+D DS
Sbjct: 160 LRPPLLQMYDCDSVTLDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDS 219
Query: 118 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 177
SNV + + + GDD +A KSG +E G P+ + + T + GI +GSE SG
Sbjct: 220 CSNVRVSNCHFDVGDDCLAFKSGINEDGRRVARPTENVAVTNCTMKNGHGGIVMGSENSG 279
Query: 178 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------DV 231
G+ N+ + GI +KTN RG +IR+I + ++YM+ + I D
Sbjct: 280 GIRNIAVSNCVFIGTDRGIRLKTNRARGSYIRDILIDNIYMDGVLCPLAINSFYRHGLDK 339
Query: 232 GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINLQG 286
D ++ +P P + I I +V + +G I GL I L ++ ++
Sbjct: 340 SDSLINELSPIEISEKTPEIEYIHISNVTARNCRSAAGFIYGLPEKYVKDIILRHVLIEM 399
Query: 287 VAGP 290
P
Sbjct: 400 TINP 403
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 133/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPF-----------------TR 59
GTIDGQG+ WW M W R+R L + R
Sbjct: 154 GTIDGQGSNDTWWPMCGAAKYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLR 213
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LI + +I+I +V NSPFW IHP++C ++++R V I PN DG DP+S
Sbjct: 214 PQLINLYSCHTILIEDVTLLNSPFWVIHPLFCESLIVRGVNIFNRG--PNGDGCDPESCK 271
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG + G + PS I +R + G+ +GSE SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVVIGSEISGGY 331
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ + N+ I +KT+ RGG I N+ V D+ + R+ + + ++ +
Sbjct: 332 RNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRDITVGQCREAV-LRINLQYENRE 390
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
N N PVV + +K+V K + LI GL +
Sbjct: 391 NCNRNFPPVVRNVHLKNVTCEKSRLGVLIIGLDD 424
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 120/262 (45%), Gaps = 18/262 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN++ +++ + FQNSP W IHP+ C ++ +R V + P N D +D +
Sbjct: 446 FLRPNMVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWYGQNNDALDLE 505
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N +E TGDD + +KSG D G G P+ I +R T G +GSE S
Sbjct: 506 SCRNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCTVFHGHGGFVIGSEMS 565
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GGV N+ N VG+ KT GRGG + NI V+D+ M N A+
Sbjct: 566 GGVRNLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAILFDMYYMAKD 625
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ + G+ P+ K P P IK++ + LI+GL P I + N
Sbjct: 626 PVSLNGEKNVLPEMKAEPLGEGTPQFRNFHIKNIVCQGAETGILIRGLPEMPIKNISIEN 685
Query: 282 INL---QGVAGPTSPPLKCSDV 300
N+ QG+ S ++ ++
Sbjct: 686 ANITCNQGLVCVESENIRLKNI 707
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 52 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 169 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V +V + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV- 379
Query: 227 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 268
+ ++ +K + N PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRNFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 155/339 (45%), Gaps = 41/339 (12%)
Query: 6 MILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQ---------RTLP 56
+I W +F + + I+ GE GT++G G+ ++ W R +
Sbjct: 123 VITRWEGTELFNYSPLIYAYHVQNIALTGE-GTVNGNGSKKFSPWNNIQTVEQEMLRKMG 181
Query: 57 FT---------------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 101
T RP IE ++ I V +SPFW IHP++C+NV++R VT+
Sbjct: 182 RTNVPVYRRIFGEGYKLRPGFIEPFGCANVRIEGVTIMDSPFWVIHPIFCNNVIVRNVTV 241
Query: 102 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 161
+ + N DG DP+S NV IE STGDD +A+KSG D G P+ + IR +
Sbjct: 242 --DSHNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCS 299
Query: 162 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 221
S +G+ +GSE +GGV N+ E+I + I+ K+N+ RG +I+++ V +V +
Sbjct: 300 FRSKINGVCIGSEIAGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTV 359
Query: 222 RKGIKIAGDVGDHPDDKFNPNAL--PVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGIC 278
R + + P+ K +A + + I++V + + G+ + G P I
Sbjct: 360 RTAL-----IRFEPNYKGERSAFHPTLFDSFLIENVTCKQSNECGIYMAGFAERPLQNIV 414
Query: 279 LSNINLQGVAGP------TSPPLKCSDVSGSAYQVKPWP 311
L N+ + V P + + V+G KP P
Sbjct: 415 LKNVTIGKVPTPYCFQNGENIRFQSVKVNGKKLDEKPTP 453
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 132/295 (44%), Gaps = 42/295 (14%)
Query: 28 EKISFIGENGTIDGQGAIWWN----------------------MWRQ----RTL------ 55
E I+ GE G +DGQG WW ++ Q +TL
Sbjct: 120 ENITIKGE-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNV 178
Query: 56 --------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
F RP I+ + R++ I + NSPFW ++P +C NV ++ VTI S
Sbjct: 179 DWHSTLDRRFLRPPFIQPLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPS 237
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PNTDGI+P+S SNV I D +IS GDD + +KSG D G P ITI T S
Sbjct: 238 PNTDGINPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHG 297
Query: 168 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
G+ +GSE SGGV+ V + GI +K+ GRGG + +I VS+V M + ++ +
Sbjct: 298 GVVIGSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVV 357
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+ PV I + + Q + GL +P GI +I
Sbjct: 358 LNLKYSQMKMEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDI 412
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 18/239 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++F + I V NSPFW +HPV C +VV+R VT + PN DG DP+
Sbjct: 221 FLRPAFVQFYACNQVKIEGVTLVNSPFWLLHPVLCESVVVRGVT--CRSHGPNNDGCDPE 278
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE TGDD +A+KSG +E G G + +R G+ +GSE S
Sbjct: 279 SCKNVLIEQCVFDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCEMRDGHGGLVLGSEIS 338
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GG N+ EH +N ++ + KTN RGG I + V V+++ A++ + + G
Sbjct: 339 GGARNIFMEHCSMNSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVVNFHYEEG 398
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
+ G+H +P V I ++D+ +V++ ++G ++P I L VA
Sbjct: 399 EAGEH---------MPTVRDILVEDLRCDQVERVFHLRGFAHNPVGAITLRRAQFGRVA 448
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ ++F R++++ +V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 185 YLRPSFVQFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 242
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 174
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 243 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 302
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 229
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 303 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 362
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 363 EEGEY---------LPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISDTIMEG 410
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ ++F R++++ +V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 185 YLRPSFVQFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 242
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 174
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 243 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 302
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 229
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 303 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 362
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 363 EEGEY---------LPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISDTIMEG 410
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 125/237 (52%), Gaps = 7/237 (2%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ +++I V + SPFW +HPV C NV IR + I + PN DGIDP+
Sbjct: 212 YLRPPFIQPYRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDI--NSHGPNNDGIDPE 269
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S +V IED + STGDD +A+ SG +E G G P + IR + G+ +GS+ S
Sbjct: 270 SCDHVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCRMADGHGGLTIGSQIS 329
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
G V NV AE+ L ++ I K N RGG + + ++ + R+ + V +
Sbjct: 330 GHVRNVFAENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRAVVT---VDFN 386
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
++ N PV+ + I++V + +++ +QGL +P I + + + +GVA P+
Sbjct: 387 YEEGANGRFKPVLRDVLIENVRSGRSRRAVDLQGLPGAPARDIRIVDCDFRGVAEPS 443
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPNL NS+ I++ V FQNSP W +HP+ ++V+R V + P + N DGID +
Sbjct: 236 FYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYAQNGDGIDIE 295
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE+S GDD + +KSG DE G P+ + +R G +GSE S
Sbjct: 296 SCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHAHGGFVIGSEMS 355
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GG +N+ + + +G+ KT GRGG + N+ +++ YM++ A+
Sbjct: 356 GGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGDAILFDMYYEAKD 415
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ +AG+ P +F P A P IK+V + ++G+ I L +
Sbjct: 416 PVPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGIPEMNVQNIYLED 475
Query: 282 INLQGVAG 289
+ L+ G
Sbjct: 476 LTLEAKTG 483
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 136/269 (50%), Gaps = 22/269 (8%)
Query: 37 GTIDGQGAIWWNMWRQRTLP------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 90
GTIDGQG +WW+ + RP + +S+ + + N+ QN+ FW + P Y
Sbjct: 118 GTIDGQGKVWWDYVKGAKDAGVLGNDHPRPMGLLIDHSKHVTVENITIQNAGFWQVVPYY 177
Query: 91 CSNVVIRYVTILAPAD-SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 149
+V ++ +LAP +PNTDGIDP SSS++ I+ + S GDD +A+KSG
Sbjct: 178 SDYLVFSHLRVLAPQRGAPNTDGIDPFSSSHIKIDHYFSSVGDDNIAIKSGAIN-SPGPD 236
Query: 150 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
PS I I S G+++GSE +GGV +V AE I+ GI VK N RG
Sbjct: 237 APSEDIVITDCIFESGH-GLSIGSEIAGGVHHVHAERISFKGTDQGIRVKANRDRGNDTS 295
Query: 210 NITVSDVYMENARKGIKIA---------GDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 260
++T D+ M++ R I I+ G+V P + P+ + I I++V
Sbjct: 296 DLTFKDITMDDVRTSILISEYYPKAMPEGEVASAPITRLTPH----FHDIHIENVKSVNS 351
Query: 261 QQSGLIQGLKNSPFTGICLSNINLQGVAG 289
+G+I GL SP T I L N+++Q G
Sbjct: 352 DWAGVIVGLPESPVTDISLKNVSIQAKKG 380
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 52 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 169 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V +V + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV- 379
Query: 227 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 268
+ ++ +K + + PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 52 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 169 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V ++ + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAV- 379
Query: 227 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 268
+ ++ +K + + PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 52 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 169 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V ++ + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAV- 379
Query: 227 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 268
+ ++ +K + + PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPNL+ N + I++ V FQNSP WN+HP+ C ++ +R V + P + N DGID +
Sbjct: 236 FFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIE 295
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV +E+S GDD + +KSG DE G P+ + IR G +GSE S
Sbjct: 296 SCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHGGFVIGSEMS 355
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI--------------TVSDVYMENAR 222
GG N+ + +G+ KT GRGG + NI ++D+Y E A+
Sbjct: 356 GGARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISMFDIPGEAILADMYYE-AK 414
Query: 223 KGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 280
I + GD + P A P IKDV ++ +GL G+ L
Sbjct: 415 DPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLE 474
Query: 281 NINLQGVAG 289
NI+++ G
Sbjct: 475 NISIKSKKG 483
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 91/140 (65%)
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGG+ ++ H+ +++ GI KT+ GRGG+I ++ +S+V MEN GI+ G+ HP
Sbjct: 2 SGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTHP 61
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 295
DD F+P+ LP ++ +T+K++ GT + +G++ G++ +PFT ICLSN+N AG
Sbjct: 62 DDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSSW 121
Query: 296 KCSDVSGSAYQVKPWPCSEL 315
CSDVSG + V P PC+EL
Sbjct: 122 SCSDVSGYSEAVFPEPCTEL 141
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 15/252 (5%)
Query: 53 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 112
R + RP L+ + +++ V FQNSPFWN+HP C ++++ V + P +S N DG
Sbjct: 208 RLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQNGDG 267
Query: 113 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 172
+D +S NV + S GDD V +KSG +E G G P+ + + T G VG
Sbjct: 268 LDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCTVFHGHGGFVVG 327
Query: 173 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-------------E 219
SE SGGV ++L + N G+ K+N RGG + +I + +VYM
Sbjct: 328 SEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYMCGIAAEPILFDMYY 387
Query: 220 NARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 277
+ ++ D + P P + I I DV + ++ L GL + I
Sbjct: 388 QGKSAVEAMEDALKGSMETIPPVTEKTPKFDHIHISDVHCYQAGRALLFDGLPEQNISDI 447
Query: 278 CLSNINLQGVAG 289
L N+ + V G
Sbjct: 448 TLRNVTIHAVEG 459
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F +++ V SPFW +HP+ NV++R V + PN DG DP+S
Sbjct: 711 RPPFIQFYRCNRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKF--DSHGPNNDGCDPESC 768
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IE + GDD VA+KSG + G + PS I +R +G+AVGSE SG
Sbjct: 769 ENVLIESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCIMRDGHAGVAVGSEISGS 828
Query: 179 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 235
+V + + + + +K+N RGG + D+ + ++ + ++
Sbjct: 829 CYDVWVRDCVMDSPSMDRPLRIKSNALRGGVVDGFYARDIRIGECKQAVLRLELQYERVQ 888
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGP 290
+N PV I +++V K LI+G ++ + L N L+G+ P
Sbjct: 889 SGPYN----PVFRNIYLENVTCKKSSYGILIEGFEDRISIFNVRLKNCRLKGIQTP 940
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ ++++I V N+PFW ++PV C NV + V ++ PN+DG DP+
Sbjct: 253 YLRPPFIQPYACKNVLIEGVTITNAPFWLLNPVLCENVTVDGVNCIS--HGPNSDGCDPE 310
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I++ TGDD +A+KSG + G P+ I I G+ +GSE S
Sbjct: 311 SCKNVVIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCKMREGHGGVVIGSEIS 370
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GGV NV EH + N+ GI +KTN RGG I N + D+ + I I D +
Sbjct: 371 GGVRNVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVIDFDYEEG 430
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
KF P V I I+++ + ++G K SP + L+N + + V
Sbjct: 431 DAGKFT----PTVRNIDIRNLHCENAKHVFQVRGYKRSPIQNLHLTNCHFKQV 479
>gi|238024144|ref|YP_002908376.1| glycoside hydrolase [Burkholderia glumae BGR1]
gi|237878809|gb|ACR31141.1| Glycoside hydrolase [Burkholderia glumae BGR1]
Length = 673
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++EF+ ++++ N QN+PFW HP C+NVVIR V +A + PN DG DPD
Sbjct: 341 FLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIRGV--MADSIGPNNDGFDPD 398
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ +NV + +TGDD +A+KSG D EYG A H ++ T +S GI +GS
Sbjct: 399 ACNNVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQNH-----VVQNCTMNSGHGGITLGS 453
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GG+ENV A ++ + N + + I +KTN+ RGGF+RN V+ V + N G+
Sbjct: 454 EMGGGIENVYARNLTMLNQFWATNSLNIAIRIKTNMNRGGFVRNFYVNGVTLPN---GVS 510
Query: 227 IAG 229
+ G
Sbjct: 511 LTG 513
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 124/237 (52%), Gaps = 18/237 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ ++F R++++ V NSP W IHPV NV+IR + I + PN DGIDP+
Sbjct: 187 YLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEI--SSTGPNNDGIDPE 244
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 174
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 245 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 304
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 229
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 305 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 364
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 365 EEGEY---------LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 412
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 52 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 169 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V ++ + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERIIRIKTNNCRGGVIENIYVRNIEVGECREAV- 379
Query: 227 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 268
+ ++ +K + + PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 125/233 (53%), Gaps = 10/233 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ ++F R++++ V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 185 YLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 242
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 174
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 243 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 302
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI-TVSDVYMENARKGIKIAGDVGD 233
SGGV NV+A + NV + +KTN RGG++ NI + +V M + + I+I +
Sbjct: 303 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRI-----N 357
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
D LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 358 LRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 410
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG +P+
Sbjct: 229 FLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGCNPE 286
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GSE S
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGSEIS 346
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I G
Sbjct: 347 GGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEG 406
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
D G N +P VN + I ++ K Q++ ++G + +P +G+ L ++ A
Sbjct: 407 DAG---------NFMPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAA 457
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ +++I V +NSPFW ++PV C NV +R I + PN+DG DP+
Sbjct: 222 YLRPPFIQPYACINVLIEGVTIKNSPFWLVNPVLCKNVTVR--NIHCDSHGPNSDGCDPE 279
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+ ++V IE+ TGDD +A+KSG + G G P I I S G+ +GSE S
Sbjct: 280 ACTDVLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGHGGVVIGSEIS 339
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GGV N+ A++ + ++ GI +KTN RGG ++N+ D+ + ++ + I G
Sbjct: 340 GGVRNLYAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVINFYYEEG 399
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
DVG KF PV+ I I++++ ++ ++G ++P TG+ + N+ + V
Sbjct: 400 DVG-----KFT----PVLEDINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTILKV 448
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 124/233 (53%), Gaps = 8/233 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP LI F+ S +I+I +V SPFW IHP+ C N+ + V I + PN DG DP++
Sbjct: 211 RPQLINFVRSENILIKDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEAC 268
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I+++ TGDD +A+KSG + G +G PS I IR G+ +GSE SGG
Sbjct: 269 ENVIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCKMEDGHGGVVIGSEISGG 328
Query: 179 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 235
ENV AE +++ N+ + +KTN RGG I+NI + +V + ++ + KI D ++
Sbjct: 329 CENVYAENCYMDSPNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDYENNE 388
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 287
D P V + +++V K + L+ GL N I L N GV
Sbjct: 389 D--CYRGFEPTVRNVNMENVTCEKSEYGVLMIGLDNVDNIYDINLKNCTFNGV 439
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG +P+
Sbjct: 229 FLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGCNPE 286
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GSE S
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGSEIS 346
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I G
Sbjct: 347 GGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEG 406
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
D G N +P VN + I ++ K Q++ ++G + +P +G+ L ++ A
Sbjct: 407 DAG---------NFMPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAA 457
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 37 GTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
G +DGQG WW +R+ L + RP LI F + + I + ++ +SP W ++P+ C N+
Sbjct: 106 GMLDGQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNL 165
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
I + I PADSPNTDGIDP+S NV I + +I GDD +A+KSG ++
Sbjct: 166 TIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CEN 223
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 214
ITI + +GSE SG + NV + + GI +K+ GRGG I +I V+
Sbjct: 224 ITIVNCHMLHGHGAVVLGSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVN 283
Query: 215 DVYMEN 220
++ M+N
Sbjct: 284 NIVMDN 289
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 5/254 (1%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
+R F RP L++ N+ ++ I V F++SP W IH +Y +V + + +AP SPNTD
Sbjct: 182 ERYREFFRPQLLQLYNAENVTIEGVTFKDSPMWTIHILYSRHVTLINTSSIAPDYSPNTD 241
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+ DSSS+V + I GDD + +KSG DE G G PS I G +
Sbjct: 242 GVVVDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKRGHGGFVI 301
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGD 230
GSE SGGV NV + G+ +KT GRGG I N+ V+++YM N + + +
Sbjct: 302 GSEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNIIHEAVVVDMF 361
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGV 287
P + + P + G+ I++ Q+ LI GL P I + N + +G+
Sbjct: 362 YEKRPVEPVSERT-PKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENTRITSNKGI 420
Query: 288 AGPTSPPLKCSDVS 301
+ ++ S+V
Sbjct: 421 HIENASSIRLSNVK 434
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPNL+ N + I++ V FQNSP WN+HP+ C ++ +R V + P + N DGID +
Sbjct: 243 FFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIE 302
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV +E+S GDD + +KSG DE G P+ + IR G +GSE S
Sbjct: 303 SCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHGGFVIGSEMS 362
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS--------------DVYMENAR 222
GG N+ + +G+ KT GRGG + NI + D+Y E A+
Sbjct: 363 GGARNIWVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISMFDIPGEAILVDMYYE-AK 421
Query: 223 KGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 280
I + GD + P A P IKDV ++ +GL G+ L
Sbjct: 422 DPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLE 481
Query: 281 NINLQGVAG 289
NI+++ G
Sbjct: 482 NISIKSKKG 490
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP L+ NS+ ++ +FQNSP WN+HP+ ++++R VT+ P S N DG+D +
Sbjct: 227 FLRPVLVSIQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVE 286
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE+S GDD + +KSG D+ G G P I ++ G+ VGSE S
Sbjct: 287 SCKNVIIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIVYHGHGGVTVGSEMS 346
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NARKGIKI 227
GGV+N+ + VG+ K+ GRGG + NI +SDV+M + G K
Sbjct: 347 GGVKNLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDIPSQAISFDLYYGGKS 406
Query: 228 AGDVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ + + A+PV I+IK++ QQ+ +QGL I ++N
Sbjct: 407 IAETLAEGGNTVSTKAIPVNEETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEITN 466
Query: 282 I 282
+
Sbjct: 467 L 467
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 124/237 (52%), Gaps = 18/237 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ ++F R++++ V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 187 YLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 244
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 174
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 245 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 304
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 229
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 305 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 364
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 365 EEGEY---------LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 412
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 116/248 (46%), Gaps = 15/248 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN++ + I++ V FQNSP W +HP+ C ++ +R VT P + N DG+D +
Sbjct: 211 FLRPNMLSLTRCKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGDGLDLE 270
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N ++D GDD + +KSG DE G G P+ IT+R G +GSE S
Sbjct: 271 SCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRNSRVYHAHGGFVIGSEMS 330
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GGV+N+ + VG+ KT GRGG + NI V + M + A+
Sbjct: 331 GGVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDIAGEAILFDMYYAAKD 390
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ G+ + P + P A P I++V + + LI+GL I + N
Sbjct: 391 PVPQQGESNELPVIQPQPLSEATPQFRSFQIRNVTCKGAETAILIRGLPEMAVKDILIEN 450
Query: 282 INLQGVAG 289
LQ G
Sbjct: 451 AVLQSRKG 458
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 16/261 (6%)
Query: 47 WNMWRQRTL-PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
W + + +T+ F RP ++ ++ +I++ FQNSP WNIHP+ N+++R +T+ P
Sbjct: 208 WTIEQLQTVRSFLRPVMVSLVDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPW 267
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
+ N DG+D +S NV + ++ GDD + +KSG +E G P+ + I+ T
Sbjct: 268 YAQNGDGLDLESCENVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKNNTVYHG 327
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR--- 222
G VGSE SGGV + H N G+ K+ GRGG + I +S +YM +
Sbjct: 328 HGGFVVGSEMSGGVSKIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIKTDA 387
Query: 223 ---------KGIKIAGDVGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLK 270
+ ++ D+ ++ +D+ P P I I D+ K +SG GL
Sbjct: 388 IRFNLYYGGQAPDLSNDLAENTEDRDVPEVTIETPSFKDIYISDITSVKAHKSGFFMGLP 447
Query: 271 NSPFTGICLSNINLQGVAGPT 291
+ + N G G T
Sbjct: 448 EMNIQNVSIKNSLFHGEEGFT 468
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 129/293 (44%), Gaps = 33/293 (11%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLP------------------------FTRPN 61
+ +S IG+ GTIDG + WR P + RP+
Sbjct: 131 QLHDVSIIGK-GTIDGNAMTTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPH 189
Query: 62 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 121
LI+ I I +V NSPFW IH + N ++R +I A N DGIDP+ S NV
Sbjct: 190 LIQLYGCERITIEDVFITNSPFWCIHLLQSENAILR--SIRFDAKLVNNDGIDPEMSRNV 247
Query: 122 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 181
IED + + GDD VA+KSG D G PS I IR + +GSE S G++N
Sbjct: 248 LIEDVHFNNGDDNVAIKSGRDHDGRGTACPSENIIIRNCHFKG-LHAVVLGSEMSAGIQN 306
Query: 182 VLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 240
V E+ + G+++KTN RGGFIRNI+ + + I G D
Sbjct: 307 VYVENCDYAGYCKRGLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYGGEGQDN-- 364
Query: 241 PNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 292
+ IT++++ K + GL+ QG K P I NI + V S
Sbjct: 365 -TFFTDIENITVENIQCRKARAGGLVLQGTKAKPLRNIQFRNITIGEVKNAIS 416
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 124/237 (52%), Gaps = 18/237 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ ++F R++++ V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 185 YLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 242
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 174
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 243 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 302
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 229
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 303 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 362
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 363 EEGEY---------LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 410
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPF-----------------TR 59
GTIDGQG+ WW+M W R+R L + R
Sbjct: 154 GTIDGQGSNETWWSMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRIMKPEDGMR 213
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LI + +++I +V NSPFW IHP++C ++++R V + PN DG DP+S
Sbjct: 214 PQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFNRG--PNGDGCDPESCK 271
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG ++ G + PS I +R + G+ +GSE SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMKNGHGGVVIGSEISGGY 331
Query: 180 ENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ + + + I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 332 RNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRE 390
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K N P V + +K+V K + LI GL +
Sbjct: 391 KCNRGYAPTVRNVHLKNVTCEKSKLGVLIIGLDD 424
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 37 GTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
G +DGQG WW +R+ L + RP LI F + + I + ++ +SP W ++P+ C N+
Sbjct: 106 GMLDGQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNL 165
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
I + I PADSPNTDGIDP+S NV I + +I GDD +A+KSG ++
Sbjct: 166 TIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CEN 223
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 214
ITI + +GSE SG + NV + + G+ +K+ GRGG I +I V+
Sbjct: 224 ITIVNCHMLHGHGAVVLGSEMSGDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVN 283
Query: 215 DVYMEN 220
++ M+N
Sbjct: 284 NIVMDN 289
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 134/287 (46%), Gaps = 17/287 (5%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMN 67
W N + F S +++ G+ GT++G G WWN +++ + RP + +N
Sbjct: 170 WEGNPLDCFCSLIYGKDVQQVRIYGD-GTLNGSGMEGGWWNEPKKKNRAY-RPRNVSLVN 227
Query: 68 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 127
I + + QNS WNIHP+Y SN+ +TI + DSPNTDG++P+S NV I
Sbjct: 228 CSDITVCGLTSQNSAAWNIHPLYSSNLAFYGLTIQSDPDSPNTDGLNPESCENVEIVGCR 287
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 187
GDD +A+KSG + PS IT+RR G+ +GSE S GV++VL ++
Sbjct: 288 FQVGDDCIAIKSGKLFLSRRHLRPSRKITVRRCLMEEGHGGVVIGSEISCGVQDVLVQNC 347
Query: 188 NLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKI----AGDVGDHPDDKFNP 241
G +KT GRG + + S V ME I D H D
Sbjct: 348 LFRRTDRGFRIKTRRGRGSTSVVDGVRFSHVKMEQVSHCFVINMFYHCDPDGHSDLVQCK 407
Query: 242 NALPV------VNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSN 281
ALPV V IT+ D+ ++ S + + GL SP + + N
Sbjct: 408 EALPVGAETPAVQNITLSDICADEIAGSAVFLYGLPESPIRNVTVKN 454
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN++ + +++ V FQNSP W +HP+ C +V +R VT+ + N DG+D +
Sbjct: 446 FLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYAQNGDGVDLE 505
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N +E+ TGDD + +KSG DE G G P+ IR G +GSE S
Sbjct: 506 SCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRVYQAHGGFVIGSEMS 565
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GGV N+ + VG+ KT GRGG + NI V+++ M A+
Sbjct: 566 GGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAILFDMYYAAKD 625
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ AGD + P + P P + +V + LI+GL P + I + N
Sbjct: 626 PVPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLPEMPVSNILIEN 685
Query: 282 INLQGVAG 289
LQ G
Sbjct: 686 AVLQTRKG 693
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 37 GTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
G +DGQG WW +R+ L + RP LI F + + I + ++ +SP W ++P+ C ++
Sbjct: 106 GMLDGQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDL 165
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
I + I PADSPNTDGIDP+S NV I + +I GDD +A+KSG ++
Sbjct: 166 TIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CEN 223
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 214
ITI + +GSE SG + NV + + GI +K+ GRGG I +I V+
Sbjct: 224 ITIVNCHMLHGHGAVVLGSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVN 283
Query: 215 DVYMEN 220
++ M+N
Sbjct: 284 NIVMDN 289
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 37 GTIDGQGAIWWNMWRQ--RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
G +DGQG WW +R+ L + RP LI F + + I + ++ +SP W ++P+ C ++
Sbjct: 106 GMLDGQGQRWWKTFRENREQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDL 165
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
I + I PADSPNTDGIDP+S NV I + +I GDD +A+KSG ++
Sbjct: 166 TIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CEN 223
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 214
ITI + +GSE SG + NV + + GI +K+ GRGG I +I V+
Sbjct: 224 ITIVNCHMLHGHGAVVLGSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVN 283
Query: 215 DVYMEN 220
++ M+N
Sbjct: 284 NIVMDN 289
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 116/259 (44%), Gaps = 25/259 (9%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
+R F RP +I + ++++ VIFQNSP WNIHP C+N+++ +T+ P + N D
Sbjct: 219 ERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYAQNGD 278
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
GID +S NV + +S GDD + +KSG D+ G G P I + G V
Sbjct: 279 GIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCIVFHGHGGFVV 338
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN----------- 220
GSE SGGV NV + VG+ K+ GRGG + NI + D+ M N
Sbjct: 339 GSEMSGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNILQEPLLFDLF 398
Query: 221 ----------ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 270
A G D+ P D+ P I I++VW +++ GL
Sbjct: 399 YGGKSASEAHAEGGDAEVTDIAPKPVDE----TTPAFRDIHIRNVWCRGARRAMYFNGLP 454
Query: 271 NSPFTGICLSNINLQGVAG 289
+ + N + V G
Sbjct: 455 EMNVERVTVENTQIYAVTG 473
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 11/236 (4%)
Query: 51 RQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
RQR + RP I+ R++++ +V N+PFW +HPV C NV R + + +
Sbjct: 204 RQRHYSDGHYLRPPFIQPYQCRNVLLEDVTIINAPFWLVHPVLCDNVTARRLHLQSLG-- 261
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PN+DG +P+S NV IE + TGDD +A+KSG + G PS I IR +
Sbjct: 262 PNSDGCNPESCRNVLIEHCFFDTGDDCIAIKSGRNADGRRLNIPSENIVIRHCEMRAGHG 321
Query: 168 GIAVGSETSGGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SGGV NV A ++ ++ G +KTN RGG I NI + D+ + + I
Sbjct: 322 GVVIGSEISGGVRNVYAHDNRMSSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAI 381
Query: 226 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
I + KF+ P V I + ++ QQ I+G +P + ++N
Sbjct: 382 VINFHYEEGDAGKFD----PTVRNINLDNISCEHAQQVFQIRGFDRAPIKQLSITN 433
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 24/250 (9%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ F +++ + VIFQNSP WNIHP+ C NV+I + + P+ + N D
Sbjct: 217 QSVRDFLRPVMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNGD 276
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S NV + +S GDD + +KSG +E G G P + + T G V
Sbjct: 277 GLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCTVFKGHGGFVV 336
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM------------- 218
GSE SGGV N+ + VG+ K+N GRGG + NI +S++ M
Sbjct: 337 GSEMSGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISMIDIATEPLHFNLY 396
Query: 219 -------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
E G KI P D+ P ITIK+V+ ++ ++ GL
Sbjct: 397 YGGKSAVEELEDGTKIVRQEKLPPVDE----TTPTFKNITIKNVYCSEANKAMYFYGLPE 452
Query: 272 SPFTGICLSN 281
+ + N
Sbjct: 453 HNIKNLQIEN 462
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN+I I++ V FQNS WNIHP+ +++ IR + + P S N DG+D +
Sbjct: 213 YLRPNMILLEKCERILLEGVTFQNSAAWNIHPLMSADLTIRNINVRNPWYSQNGDGLDIE 272
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV +E S GDD + +KSG +E G G P+ + +R T G VGSE S
Sbjct: 273 SCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCTVYHAHGGFVVGSEMS 332
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GG +N+ ++ +G+ KT GRGG + N+ +++++M++ A+
Sbjct: 333 GGAKNLYVDNCTFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDIPGEAILFDMYYEAKD 392
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
I ++G+ + P +F P A P I +V ++ I+GL I L+
Sbjct: 393 PIVLSGEHREPPKVEFLPVTEATPQFKDFYINNVVCDGAAKALFIRGLPEMHIKNIQLTR 452
Query: 282 INLQGVAG 289
+++ G
Sbjct: 453 LDMVAKEG 460
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 18/240 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG +P+
Sbjct: 229 FLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGCNPE 286
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GSE S
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGSEIS 346
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I G
Sbjct: 347 GGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEG 406
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
D G N +P V + I ++ K Q++ ++G + +P +G+ L ++ A
Sbjct: 407 DAG---------NFMPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAA 457
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+ ++I V +NSPFW I+PV C +VVIR V ++ PN+DG DP+S
Sbjct: 223 RPPFIQPYGCERVLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVS--FGPNSDGCDPESC 280
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
V IE+ TGDD +A+KSG + G P + I+ S G+ +GSE SGG
Sbjct: 281 QRVLIENCLFDTGDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKSGHGGVVIGSEISGG 340
Query: 179 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDV 231
+ + A + N+ G+ +KTN RGG I I V D+ + + I I GD
Sbjct: 341 AKQIFARRCRMSSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYEEGDA 400
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
G N LP V + I + K Q++ I+GL + +GI +S+++ +
Sbjct: 401 G---------NFLPEVKDLKISNFRVKKAQRAFEIRGLPRAGISGIQMSDVSFE 445
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 77/105 (73%)
Query: 54 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 113
T TRP LIE M S +I ISN+ NSP WN+HPVY SN++++ +TI AP SPNTDGI
Sbjct: 95 TRRHTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGI 154
Query: 114 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 158
+PDS +NV IED YI +GDD VAVKSGWDEYGI +G P+ + I
Sbjct: 155 NPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 138/288 (47%), Gaps = 46/288 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG+I WW M W R+R + R
Sbjct: 156 GIIDGQGSIDAWWPMCGSAKYGWKEGMVAQRNGGRERLQMYGETSTPVYKRLMKPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I NI V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCQMDSPNLDRVIRIKTSTCRGGLIENIFVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
K P+V + +K+V K + LI GL++ +SNI+++
Sbjct: 393 KCKRGFEPIVRNVHLKNVTCEKSELGVLIIGLEDDKH----VSNISIE 436
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 10/242 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPNL+ N + +++ V FQNSP W +HP+ C ++ +R VT P + N DG+D +
Sbjct: 222 FLRPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYAHNGDGMDIE 281
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N IE + GDD + +KSG DE G G P+ IR T + G VGSE S
Sbjct: 282 SCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRNNTVYNGHGGFVVGSEMS 341
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGI--------KI 227
GG + + G+ K+ GRGG + +I D++M+N A++ I K
Sbjct: 342 GGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNIAQEAIFFDMYYFVKF 401
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
A D G+ + PV + +++ T ++ ++GL I ++N+ L+
Sbjct: 402 ATD-GERDERPVVNEGTPVFRNMRFENIVCTGAKKGIFVRGLPEMAIQTIAMANMVLETE 460
Query: 288 AG 289
G
Sbjct: 461 KG 462
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 5/238 (2%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN ++F S++I+I V F+NSP W +HPV N++IR V + PN DG DP+
Sbjct: 209 YLRPNFVQFYKSKNILIEGVTFKNSPMWFLHPVLSENIIIRNVKTIG--HGPNNDGCDPE 266
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE Y GDD +A+KSG + G PS I IR T G+ +GSE S
Sbjct: 267 SCKNVLIEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNCTMKDGHGGVVIGSEIS 326
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GG V AE + N+ + +K+N RGG + ++ V ++ + I + ++
Sbjct: 327 GGCRFVFAEECKMDSPNLDRMLRIKSNTVRGGVVEHVYVRNIEVGEVSNAI-VRMNMFYD 385
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 292
P + + P I +++V K + GL+ SP + + N + GV S
Sbjct: 386 PKEIGPRDFPPKFRNIRVENVTSRKSDYALEFLGLEESPIENVEIINCDFNGVKKENS 443
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 133/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPF-----------------TR 59
GTIDGQG+ WW M W R+R L + R
Sbjct: 154 GTIDGQGSNETWWPMCGASRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMKPEDGMR 213
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LI + +++I +V NSPFW IHP++C ++++R V + PN DG DP+S
Sbjct: 214 PQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFNRG--PNGDGCDPESCK 271
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG ++ G + PS I +R + G+ +GSE SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKNGHGGVVIGSEISGGY 331
Query: 180 ENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ + + + I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 332 RNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRE 390
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K N P V + +K+V K + LI GL +
Sbjct: 391 KCNRGYAPTVRNVHLKNVTCEKSKLGVLIIGLDD 424
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPF-----------------TR 59
GTIDGQG+ WW M W R+R L + R
Sbjct: 154 GTIDGQGSNDTWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRVMTPEDGLR 213
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LI + +++I +V NSPFW IHP++C ++++R V + PN DG DP+S
Sbjct: 214 PQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYNRG--PNGDGCDPESCK 271
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHGGVVIGSEISGGY 331
Query: 180 ENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ + + + I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 332 RNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRE 390
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
N P V + +K+V K + LI GL N
Sbjct: 391 NCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDN 424
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 21/254 (8%)
Query: 46 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
WW +R TL RP L+ + + +V ++SP W +HP+ C +V +R VTI+ P
Sbjct: 123 WWEAFRAGTLAHPRPTLVGLHRCTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPP 182
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
DSPNTDGIDP+S NV I +I GDD +A+K+G + + + T
Sbjct: 183 DSPNTDGIDPESCRNVRISGCHIDVGDDCIALKAGTEASPERVA--CENVVVTGCTLVHG 240
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SGG+ NV+ GI +K GRGG + ++ VS+V M++ +
Sbjct: 241 HGGVVLGSEMSGGIRNVVVADCVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPL 300
Query: 226 KI--------------AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLK 270
+ GD G P D P+ IT+ V V+ + + GL
Sbjct: 301 VLNQHYDRGPGGDSPHVGDRGALPVDATT----PLFRRITVAHVSARNVRAAAVFALGLA 356
Query: 271 NSPFTGICLSNINL 284
P + L ++ +
Sbjct: 357 EQPVAELVLDDVAV 370
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 156 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMRPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 393 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I+ ++++I V NSPFW +HPV C +V +R VT + PN DG DP+
Sbjct: 237 FLRPAFIQPYLCQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRS--HGPNNDGCDPE 294
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+V IE TGDD +A+KSG +E G G + +R G+ +GSE S
Sbjct: 295 CCDHVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQMKDGHGGLVLGSEIS 354
Query: 177 GGVENVLAEHINLYN--VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GGV NV ++ + + + +KTN RGG I I + ++ + + + I +
Sbjct: 355 GGVYNVFLDNCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSINFFYEEG 414
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
+ +F LP V I I ++ Q++ ++G ++P G+ LSN + VA P+
Sbjct: 415 QEGRF----LPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTLSNCRIDKVAAPS 467
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 117/241 (48%), Gaps = 16/241 (6%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP LI F+ I IS V SPFW IHP+ C NV + V I + PN DG DP+
Sbjct: 210 RPQLINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEGC 267
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I+++ TGDD +A+KSG + G + PS I IR G+ +GSE SGG
Sbjct: 268 ENVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCVMEDGHGGVVIGSEISGG 327
Query: 179 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
+N+ AE + + + + +KTN RGG I NI + V + ++ + + ++ P
Sbjct: 328 CQNIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCKEAV-VKINLDYEPK 386
Query: 237 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGICLSNINLQ 285
+ PVV + ++DV K LI G LKN F GI N+ +
Sbjct: 387 EPCYRGFEPVVRNVNVEDVTCQKSAYGVLIVGRDSVENVTDIRLKNCSFNGISKENVKIT 446
Query: 286 G 286
G
Sbjct: 447 G 447
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 156 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 393 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 156 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 393 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 156 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETLTPVYKRLMKPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 393 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 156 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 393 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 156 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 393 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 28/263 (10%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP+LI+F R++++ ++ + SPFW +HP+ C +V IR V+I A N DG+DP+ S
Sbjct: 212 RPHLIQFNRCRNVLVEDISIRGSPFWTLHPLLCRDVTIRRVSI--QAHGHNNDGVDPEMS 269
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IED GDD V+VKSG D P + +R + +AVGSE SGG
Sbjct: 270 QNVLIEDCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCRVLNGHQLMAVGSELSGG 329
Query: 179 VENVLAEHINLYNVGVG-----------IHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
+EN+ + + G G ++VKTN RGG++RN+ +S V +
Sbjct: 330 IENIWVDDCHFVGDGRGGDDHAVPINNLLYVKTNERRGGYVRNVHMSRV------TATTL 383
Query: 228 AGDVGDHPDDKFNP---------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 278
AG V D L + + + DV + Q +I+G ++ P +
Sbjct: 384 AGSVLAVETDVLYQWRTLLPTYVRRLTAIERLRVSDVHVQQAQSVAVIKGERDLPIQDVR 443
Query: 279 LSNINLQGVAGPTSPPLKCSDVS 301
LS + ++ V+G + DV+
Sbjct: 444 LSRVRVERVSGTPTIVENARDVT 466
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN I+ +++ I++V NSP WN++PV C NV+I V +++ PN DG DP+
Sbjct: 228 YLRPNFIQPYQCKNVWIADVKLINSPMWNLNPVLCENVLIEKVKVIS--HGPNNDGCDPE 285
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+ NV I D Y TGDD +A+KSG DE G G P+ I G+ +GSE +
Sbjct: 286 ACKNVWIRDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCVMKDGHGGVVIGSEIA 345
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GG +N+ A + + N+ + +KT+ RGG I N+ + +V + ++ +
Sbjct: 346 GGAKNIYAINCEMDSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFKEAAVKCNMFYEK 405
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 290
P N +P + I ++++ K Q L + + SP T + + N NL+G+ P
Sbjct: 406 PG-----NHIPTIRNIWVENLNVEKGGQYALMVAAYQQSPVTNLRMINCNLKGIKEP 457
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 156 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 393 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 146 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 205
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 206 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 263
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 264 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 323
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 324 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENRE 382
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 383 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 416
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 67 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 126
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 127 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 184
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 185 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 244
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 245 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRE 303
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 304 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 337
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPF-----------------TR 59
GTIDGQG+ WW M W R+R L + R
Sbjct: 154 GTIDGQGSNETWWPMCGAPKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPEDGLR 213
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LI +++I +V NSPFW IHP++C ++++R V I PN DG DP+S
Sbjct: 214 PQLINLYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFNRG--PNGDGCDPESCK 271
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG + G + PS I +R + G+ +GSE SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVVIGSEISGGY 331
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ + N+ I +KT+ RGG I N+ V ++ + R+ + + ++ +
Sbjct: 332 RNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNITVGQCREAV-LRINLQYENRE 390
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
+ N P V + +K+V K + LI GL +
Sbjct: 391 QCNRGFTPTVRNVHLKNVTCQKSRLGVLIIGLDD 424
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGAI--WWNM-------W-----------RQRTLPF-----------------TR 59
G IDGQG++ WW M W R+R L + R
Sbjct: 156 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 215
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESCK 273
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGGY 333
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 334 RNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRE 392
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K P+V + +K+V K + LI GL++
Sbjct: 393 KCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 19/239 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN I+F R+++I V NSP W IHPV C NV +R VT+ + PN DG +P+
Sbjct: 218 YLRPNFIQFYRCRNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPE 275
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S V IED TGDD +A+KSG + G PS+ I IR G+ +GSE S
Sbjct: 276 SCRYVLIEDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCKMRDGHGGVVIGSEIS 335
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKI-----A 228
GG ++ AE + N+ + +KTN RGG I +I + +V + + A I++
Sbjct: 336 GGAHHIYAERCEMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRVNFYYEE 395
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
GD G P D P+V I ++++ + + ++G SP + L + GV
Sbjct: 396 GDAG--PFD-------PIVRHIEVRNLTSRQSPYALYLRGYARSPIRDVRLIDCTFDGV 445
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 15/264 (5%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +DG G WW+ ++ RP + ++ R + +N+ W IHP C +
Sbjct: 201 RGILDGSGDKGDWWSWPKETRDGARRPRGLHLVSCRKTQLLGFTIRNAASWTIHPQGCED 260
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--P 151
+ +TI+AP DSPNTDG +P+S NV I S GDD +AVK+G H
Sbjct: 261 LTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE 320
Query: 152 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
+ GI++R G+ +GSE SGGV +V E ++ G+ +KT GRGG + NI
Sbjct: 321 TRGISVRHCLMQRGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNI 380
Query: 212 TVSDVYMENARKGIKIAG----DVGDHPD--DKFNP----NALPVVNGITIKDVWGTKV- 260
T+ V ++ + + D H D NP + P V+GIT++DV +
Sbjct: 381 TMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLA 440
Query: 261 QQSGLIQGLKNSPFTGICLSNINL 284
+G+ GL +P I + N+ +
Sbjct: 441 HAAGVFLGLPEAPIRNIVVRNLTI 464
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 17/254 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
++ + RP ++ + ++I++ V FQNSP WNIHP+ N++++ VT+ P S N D
Sbjct: 160 RKVRDYLRPVMVNLVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGD 219
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
GID +S NV I D GDD + +KSG +E+G G P+ + I G +
Sbjct: 220 GIDVESCKNVVIYDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCIVYHGHGGFTI 279
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN----------- 220
GSE SGGV N+ + N +G+ K+ GRGG + NI + ++YM++
Sbjct: 280 GSEMSGGVRNIKVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDIPTEALSFNMY 339
Query: 221 -----ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
+ I +A + + + P I + D++ + + +IQGL
Sbjct: 340 YGGQAPTEDIPLAEKLKNRKVLNVDETT-PQFRNIFLNDIYCIGAEDAVIIQGLPEMKIK 398
Query: 276 GICLSNINLQGVAG 289
I L+N+ + G
Sbjct: 399 NIVLNNVVMTSKRG 412
>gi|309779639|ref|ZP_07674398.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|349616569|ref|ZP_08895706.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
gi|308921580|gb|EFP67218.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|348612214|gb|EGY61836.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
Length = 671
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ N N+PFW HPV+C+NVVIR VT+ DS PN DG D
Sbjct: 339 YLRPCMVEFIGCTNVLMENYRTVNTPFWQHHPVHCTNVVIRGVTV----DSIGPNNDGFD 394
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ SNV E+ +TGDD +A+KSG YG P+ I+ T +S GI +GSE
Sbjct: 395 PDACSNVLCENVTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIQNCTMNSGHGGITLGSE 452
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+N+ A ++ + N + + I +KTN+ RGGF++N V++V + N G+ +
Sbjct: 453 MGGGVQNIYARNLAMLNQFWATNSLNIAIRIKTNMNRGGFVKNFYVTNVSLPN---GVNL 509
Query: 228 AG 229
G
Sbjct: 510 TG 511
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 129/239 (53%), Gaps = 14/239 (5%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+ S++I+I ++ NSPFW ++PV C N+ I +T+ + N DG+DP+S
Sbjct: 238 RPPFIQPYKSKNILIKDITILNSPFWEVNPVLCENIKIDSITV--DSHLYNNDGVDPESC 295
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
++ IED + +TGDD +A+KSG + G G PS I IR GI +GSE SGG
Sbjct: 296 KDMIIEDCHFTTGDDCIAIKSGRNNEGRNIGVPSQNIIIRNNKFEDGHGGITIGSEISGG 355
Query: 179 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
V ++ A H N ++ + I KTN RGG + NI V + + ++ + I D
Sbjct: 356 VNDIFA-HDNYFDSSELDYPIRFKTNAERGGKLENIYVKNSVVNKSKIAV-IHADF--FY 411
Query: 236 DDKFNPNALPVVNGIT---IKDVWGTKVQQSG--LIQGLKNSPFTGICLSNINLQGVAG 289
++ N N +P++ IT IK V G + + ++G K++P I + ++ L GV G
Sbjct: 412 EEGTNGNYMPILRNITLSNIKTVEGGSIDANNALFLKGFKDAPIENILIEDVYLNGVKG 470
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 125/250 (50%), Gaps = 21/250 (8%)
Query: 51 RQRTL---PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
+QR + RPN ++ N ++I+I ++ NSP WN++PV C NV I V +++
Sbjct: 208 KQRVFGDGQYLRPNFVQPYNCKNILIEDIRMINSPMWNLNPVLCENVTIERVKVISHG-- 265
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PN DG DP++ NV I+D Y TGDD +A+KSG DE G G P+ I
Sbjct: 266 PNNDGCDPEACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG 325
Query: 168 GIAVGSETSGGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDV----YMENA 221
G+ +GSE +GG N+ A ++ N+ + +KT+ RGG I N+ + DV Y E A
Sbjct: 326 GVVIGSEIAGGARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAA 385
Query: 222 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLKNSPFTGICLS 280
K GDH +P + + ++++ K + L+ ++SP +
Sbjct: 386 VKFNMFYEKPGDH---------IPTIRNVWVENMHVKKGGRYALMSAAYESSPIKNFRMV 436
Query: 281 NINLQGVAGP 290
N ++ GV P
Sbjct: 437 NCDINGVKEP 446
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 45/312 (14%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLP-------- 56
+++ W F + + ++ G+ GTIDG GA+ +N W P
Sbjct: 126 MVLTKWEGTECFNYSPFIYAYQCTNVALTGK-GTIDGNGAVTFNGWHALQGPALDRLRQM 184
Query: 57 ----------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 100
+ RP +I+F +++++ +V +SPFW IHPV+C NV +R V
Sbjct: 185 GIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQIYDSPFWIIHPVFCDNVTVRNVY 244
Query: 101 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 160
I +++ N DG DP+SS+NV IE+ + GDD +A+KSG D+ G G + + IR
Sbjct: 245 I--DSNNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNC 302
Query: 161 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+ I +GSE SGGV N+ E + + GI+ K+N+ RGG+ N+ + + +
Sbjct: 303 HFAR--WAITIGSEMSGGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADV 360
Query: 221 ARKGI------KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSP 273
G+ G+HP + I I+DV +V L+ GL +
Sbjct: 361 CLWGVINFRTNYHGYRGGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAK 411
Query: 274 FTGICLSNINLQ 285
I L NI ++
Sbjct: 412 LYNITLRNIKVK 423
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 21/250 (8%)
Query: 51 RQRTL---PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
+QR + RPN ++ N ++I+I ++ NSP WN++PV C NV I V +++
Sbjct: 208 KQRVFGDGQYLRPNFVQPYNCKNILIEDIKMINSPMWNLNPVLCENVTIERVKVISHG-- 265
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PN DG DP++ NV I+D Y TGDD +A+KSG DE G G P+ I
Sbjct: 266 PNNDGCDPEACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG 325
Query: 168 GIAVGSETSGGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDV----YMENA 221
G+ +GSE +GG N+ A ++ N+ + +KT+ RGG I N+ + DV Y E A
Sbjct: 326 GVVIGSEIAGGARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAA 385
Query: 222 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLKNSPFTGICLS 280
K GDH +P + + ++++ K + L+ ++SP +
Sbjct: 386 VKFNMFYEKPGDH---------IPTIRNVWVENMHVKKGGKYALMSAAYESSPIKNFRMV 436
Query: 281 NINLQGVAGP 290
N + GV P
Sbjct: 437 NCEINGVKEP 446
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 31/301 (10%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQ--------------RTL 55
W + + + E ++ G G +DG G+ WW+ W++ + +
Sbjct: 74 WEGVECYNYSPLIYAADCENVTICG-TGVLDGAGSAWWH-WKKLQQNAADHLIRAESQEI 131
Query: 56 PFT-----------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 104
P RP+ I+F+N + + + + ++ P W IHPVYC +VV+R VT+
Sbjct: 132 PVEERIFATRKDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYCEDVVVRGVTV--N 189
Query: 105 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 164
PNTDG +PDS V IED TGDD +A+ SG +E G G P I ++
Sbjct: 190 TKGPNTDGCNPDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQIEVKNCRFIG 249
Query: 165 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK- 223
+ +A+GS SGG+ ++ GI +K+ GRGG+++ + V + M+ K
Sbjct: 250 GHAAVAIGSGMSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVNVERMQMDEIEKE 309
Query: 224 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 283
I+++ + G + A P + + + G + GL SP I L +++
Sbjct: 310 AIEVSMNYGSSTAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCGLPESPLREITLEDVS 368
Query: 284 L 284
+
Sbjct: 369 I 369
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 138/314 (43%), Gaps = 33/314 (10%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQG--AIWWN-------MWRQRTL 55
L + W A F S E ++ IGE GTIDG WW WR RT+
Sbjct: 170 LYLATWEGEAAECFASLITGINIENVNIIGE-GTIDGNANFETWWKEHKIKKGAWRPRTV 228
Query: 56 PFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 114
F+N ++I+I + +NSP W IHP N+ +TI P +SPNTDG++
Sbjct: 229 ---------FLNQCKNILIEGLTIKNSPAWTIHPFQSENLKFINLTIENPQNSPNTDGLN 279
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
P++S NV I S GDD +A+KSG + G + + +R G+ +GSE
Sbjct: 280 PEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLGKLTEKVFVRNCYMEYGHGGVVIGSE 339
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
SGGV+ V E N GI +KT GRGGFI I + M + I
Sbjct: 340 MSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTINSFYFCD 399
Query: 235 PDDK----FNPNALPV------VNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNI- 282
D K ++ LP+ + I +KD+ T Q +G + GL + + NI
Sbjct: 400 SDGKTEYVWSKEKLPIDKRTPYIGNIYLKDIGCTNTQVAAGFMYGLPERKIEKVIMENIY 459
Query: 283 -NLQGVAGPTSPPL 295
+ A P P +
Sbjct: 460 VHFDENAKPGYPEM 473
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 17/252 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ +N +++ FQNSP WNIHP+ NV+IR + + P S N DG+D +
Sbjct: 235 FLRPVMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQNGDGLDLE 294
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I ++ GDD + +KSG D+ G G P+ + ++ T G +GSE S
Sbjct: 295 SCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNNTVYHAHGGFVIGSEMS 354
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIKIAGDV 231
GGV+N+ + N VG+ K+ GRGG + NI +SD+ M E R + +G+
Sbjct: 355 GGVKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINMINIPTEAIRFNMFYSGNA 414
Query: 232 ------GDHPDDKFNPNAL------PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 279
+ D++ + + PV I +K++ T ++ GL + L
Sbjct: 415 PILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFMGLPEKSLENVTL 474
Query: 280 SNINLQGVAGPT 291
N L+ G T
Sbjct: 475 ENAMLEADEGIT 486
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 125/236 (52%), Gaps = 18/236 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ +++I V SPFW ++PV C NV + + + PN+DG DP+
Sbjct: 233 YLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPE 290
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S +NV I + TGDD +A+KSG + G P S I I + G+ +GSE S
Sbjct: 291 SCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHGGVVIGSEIS 350
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GGVEN+ A+H + ++ GI +KTN RGG ++N+ ++ + + + + G
Sbjct: 351 GGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEG 410
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
D G+ P P++ ITI+++ ++ +++G ++P +G+ L+NI ++
Sbjct: 411 DAGNFP---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 45/312 (14%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLP-------- 56
+++ W F + + ++ G+ GTIDG GA+ +N W P
Sbjct: 136 MVLTKWEGTECFNYSPFIYAYQCTNVALTGK-GTIDGNGAVTFNGWHALQGPALDRLRQM 194
Query: 57 ----------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 100
+ RP +I+F +++++ +V +SPFW IHPV+C NV +R V
Sbjct: 195 GIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQIYDSPFWIIHPVFCDNVTVRNVY 254
Query: 101 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 160
I +++ N DG DP+SS+NV IE+ + GDD +A+KSG D+ G G + + IR
Sbjct: 255 I--DSNNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNC 312
Query: 161 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+ I +GSE SGGV N+ E + + GI+ K+N+ RGG+ N+ + + +
Sbjct: 313 HFAR--WAITIGSEMSGGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADV 370
Query: 221 ARKGI------KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSP 273
G+ G+HP + I I+DV +V L+ GL +
Sbjct: 371 CLWGVINFRTNYHGYRGGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAK 421
Query: 274 FTGICLSNINLQ 285
I L NI ++
Sbjct: 422 LYNITLRNIKVK 433
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 121/253 (47%), Gaps = 19/253 (7%)
Query: 50 WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W +R RP LI F+ + +S V NSPFW IHP+ C NV + V I +
Sbjct: 198 WDERRFGLGYGLRPQLINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--E 255
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
PN DG DP++ NV I++++ TGDD +A+KSG + G + PS I IRR
Sbjct: 256 GPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCVMEDGH 315
Query: 167 SGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
GI +GSE SGG NV AE + ++ + +KTN RGG I NI V V + ++
Sbjct: 316 GGIVIGSEISGGCMNVFAEDCTMDSPHLDRVLRIKTNNCRGGRIENINVRRVKVGQCKEA 375
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSP 273
+ + ++ P + P V + ++ V K LI G LK+
Sbjct: 376 V-VKINLDYEPQEPCYRGFEPEVRNVNVEQVTCQKSAYGVLIVGRDSVENVSDIRLKDCE 434
Query: 274 FTGICLSNINLQG 286
F GI ++ + G
Sbjct: 435 FNGISKQDVRITG 447
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 147/312 (47%), Gaps = 45/312 (14%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLP-------- 56
+++ W F + + ++ G+ GT+DG GA+ +N W + P
Sbjct: 124 MVLTKWEGTECFNYTPFIYAYQCTNVALTGK-GTLDGNGAVTFNGWHAKQGPAVDRLRQM 182
Query: 57 ----------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 100
+ RP +I+F +++++ +V +SPFW IHPV+C+NV +R +
Sbjct: 183 GIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVRIFDSPFWIIHPVFCNNVTVRNIY 242
Query: 101 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 160
I +++ N DG DP+S +NV IE+ + GDD +A+KSG D+ G G + + IR
Sbjct: 243 I--DSNNYNNDGCDPESCTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNC 300
Query: 161 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+ I +GSETSGGV NV E + + GI+ K+N+ RGG+ N+ + + +
Sbjct: 301 HFAR--WAITIGSETSGGVRNVYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADV 358
Query: 221 ARKGI------KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSP 273
G+ G+HP + I I+D+ +V L+ GL +
Sbjct: 359 CLWGVVNFRTNYHGYRGGNHP---------TLFRNICIEDINCNRVDSVALMANGLPEAK 409
Query: 274 FTGICLSNINLQ 285
I L NI ++
Sbjct: 410 LYNITLRNIKVK 421
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 87/162 (53%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPNLI N +++++ V FQNSP WN+HP+ C N+ +R + I P + N DG D +
Sbjct: 223 FLRPNLIVLNNCKNVLLEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIE 282
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV +E GDD + +KSG DE G G + + IR T G VGSE S
Sbjct: 283 SCKNVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRNNTVYKGHGGFVVGSEMS 342
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
GG +N+ GI KT+ GRGG + NI + D+ M
Sbjct: 343 GGAKNIFVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINM 384
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 146/283 (51%), Gaps = 7/283 (2%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
+S G GTIDG GA+WW + RP LI SR++ I + NSP ++
Sbjct: 98 SLTDVSLTGT-GTIDGNGAVWWQRFIDSGKTLNRPRLIYLTRSRNVTIDGLTLINSPSFH 156
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
+ P C NV I+ +TI AP+DSPNTDGIDP + ++V I++ I GDD +A+K G
Sbjct: 157 LVPSQCQNVTIQNLTITAPSDSPNTDGIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQ 216
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
I P I IR G++VGSETS GV +V + GI +K+ G G
Sbjct: 217 IV--QPCQDIQIRNCRFLHGH-GLSVGSETSSGVSSVSVTNCTFTGTTNGIRIKSQPGLG 273
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G I+N++ S + M N + I + ++ + + +P V+G+TI + T + +G
Sbjct: 274 GAIQNLSYSQITMTNVTNPLIIDLAYSLNNNNGYASD-IPSVSGLTIDQLSVTGAKNAGS 332
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 308
+ GL NS + LSN+ + G + +++ SAY+++
Sbjct: 333 LVGLTNSLLQNLTLSNLQISAQTGLVLQNAR--NITMSAYRIQ 373
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 132/275 (48%), Gaps = 42/275 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPF-----------------TR 59
GTIDGQG+ WW M W R+R L + R
Sbjct: 154 GTIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLR 213
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LI + +++I +V NSPFW IHP++C ++ +R V + PN DG DP+S
Sbjct: 214 PQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRG--PNGDGCDPESCK 271
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHGGVVIGSEISGGY 331
Query: 180 ENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ + + + I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 332 RNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRE 390
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
N P V + +K+V K + LI GL ++
Sbjct: 391 NCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDDN 425
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPF-----------------TR 59
GTIDGQG+ WW M W R+R L + R
Sbjct: 154 GTIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLR 213
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LI + +++I +V NSPFW IHP++C ++ +R V + PN DG DP+S
Sbjct: 214 PQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRG--PNGDGCDPESCK 271
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCYMKKGHGGVVIGSEISGGY 331
Query: 180 ENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ + + + I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 332 RNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRE 390
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
N P V + +K+V K + LI GL +
Sbjct: 391 NCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDD 424
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 124/245 (50%), Gaps = 28/245 (11%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RPN ++F S +I++S V NSP W IHPV NV++ VT+ +P D PN+DG++P+SS
Sbjct: 221 RPNFVQFYRSSTILVSGVTLTNSPMWMIHPVLSENVLVDGVTLDSP-DGPNSDGVNPESS 279
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I +S + GDD +AVKSG + G G PS I I + G+ +GSE SG
Sbjct: 280 RNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFAGHGGVVIGSEMSGD 339
Query: 179 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------ARKGIKI--- 227
V NV AE +N ++ + +KTN RGG TV VY + A I+I
Sbjct: 340 VRNVFAERNVMNSPHLDRALRIKTNSVRGG-----TVEGVYFRDNDVPAVADAVIRINFH 394
Query: 228 --AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
GDVGD P V GI I +V + + ++G + SP T I + +
Sbjct: 395 YEEGDVGDF---------TPTVRGIHIDNVHSVGGEFALYLRGYERSPITDITIRDSTFS 445
Query: 286 GVAGP 290
P
Sbjct: 446 EATTP 450
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 124/236 (52%), Gaps = 18/236 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ +++I V SPFW ++PV C NV + + + PN+DG DP+
Sbjct: 233 YLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPE 290
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S +NV I + TGDD +A+KSG + G P S I I + G+ +GSE S
Sbjct: 291 SCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHGGVVIGSEIS 350
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GGVEN+ A+H + ++ GI +KTN RGG ++N+ ++ + + + + G
Sbjct: 351 GGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEG 410
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
D G P P++ ITI+++ ++ +++G ++P +G+ L+NI ++
Sbjct: 411 DAGKFP---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 42/274 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPF-----------------TR 59
GTIDGQG+ WW M W R+R L + R
Sbjct: 175 GTIDGQGSKETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMKPEDGLR 234
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+ + +++I ++ NSPFW IHP++C ++ +R V + PN DG DP+S
Sbjct: 235 PQLVNLYSCNTVLIEDITLLNSPFWVIHPLFCESLTVRGVKVFNRG--PNGDGCDPESCK 292
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG + G + PS I +R + G+ +GSE SGG
Sbjct: 293 NVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKNGHGGVVIGSEISGGY 352
Query: 180 ENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ + N+ I +KT+ RGG I N+ V +V + R+ + + ++ +
Sbjct: 353 RNLYVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNVTVGQCREAV-LRINLQYENRE 411
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
K + + PVV + +K+V K + LI GL +
Sbjct: 412 KCDRSFPPVVRNVHLKNVTCEKSKLGILIIGLDD 445
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 144/307 (46%), Gaps = 56/307 (18%)
Query: 28 EKISFIGENGTIDGQG--AIWW---------------NMWRQRTLPFT------------ 58
+ I+ GE GT+DGQG WW N + R L F
Sbjct: 146 KNIAITGE-GTLDGQGDNEHWWPWKGKKEFGWKEGEPNQQQDRDLLFKMAEEKVPVKERV 204
Query: 59 -------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
RP+ I+ +S++I+I V NSP W I+PV N++I V I+ PN D
Sbjct: 205 FGKGHYLRPSFIQPYHSKNIMIKGVTILNSPMWQINPVLSENILIDDVKIIG--HGPNND 262
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+DP+SS NV I+DSY GDD +A+KSG + G PS I I G+ +
Sbjct: 263 GVDPESSKNVLIKDSYFDNGDDCIAIKSGRNADGRRINVPSENIIIEGNEMKDGHGGVVI 322
Query: 172 GSETSGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKI- 227
GSE SG V NV A+H ++ N+ + +KTN RGG I +I S+ +++ + I+I
Sbjct: 323 GSEISGSVRNVFAQHNVMDSPNLDRALRIKTNSVRGGTIEDIDFSNNTVKSVGSEVIQID 382
Query: 228 ----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 283
GD G N PVV I I+++ + I+ + SP T + + + N
Sbjct: 383 MYYEEGDTG---------NFTPVVRNINIENLQSNGGKYGLWIRAYERSPVTNLTIRHSN 433
Query: 284 LQGVAGP 290
Q VA P
Sbjct: 434 FQHVATP 440
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 30 ISFIGENGTIDGQGAIWWNMW--RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
++ GE GTIDG A W N W + RP +I + I+ + QNSP WNIH
Sbjct: 201 VTICGE-GTIDGN-ASWENWWLDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNIH 258
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P +CS++ VT+L P SPNTDG++P+S +V I S GDD +AVK+G G
Sbjct: 259 PYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAK 318
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG-- 205
Y PSS I IR+ I +GSE + G++N+ A N G+ +KT GRG
Sbjct: 319 YKVPSSNIRIRQCCMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRGKD 378
Query: 206 GFIRNITVSDVYMEN 220
I I D+ M++
Sbjct: 379 AVIDGILFEDIRMDS 393
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 129/292 (44%), Gaps = 33/292 (11%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQR-----TLP-------------------FTRPNL 62
+S +G+ G IDG A + WR R TL + RP L
Sbjct: 154 LHDVSIVGK-GLIDGNCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQL 212
Query: 63 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 122
I+ R++ I V NSPFW IH + NV+ R + A N DGIDP+SS NV
Sbjct: 213 IQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPESSRNVL 270
Query: 123 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 182
IED GDD VA+KSG D G + HPS I IRR + +GSE SGGV NV
Sbjct: 271 IEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMSGGVRNV 329
Query: 183 LAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 241
E + G+++KTN RGG+++NI + D + I + + +
Sbjct: 330 FVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYAGEGLGS 386
Query: 242 NALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 292
V + + V K + +G++ QG K P + + + + V S
Sbjct: 387 RHFSEVEHLLVDGVSCRKARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 438
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 103/195 (52%), Gaps = 7/195 (3%)
Query: 30 ISFIGENGTIDG--QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
+ GE GTIDG WWN + R + + RP LI + +I + + +NSP WNIH
Sbjct: 192 VEITGE-GTIDGCADETNWWNNPKVRNIAW-RPRLIFLNHCNNITVQGITVKNSPCWNIH 249
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P + ++ +TIL P DSPNTDG+DP+S NV I Y S GDD +A+KSG G
Sbjct: 250 PYFSDDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGKIYMGAK 309
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
+ PS + IR+ I +GSE +GGV+N+ + G+ +KT GRG
Sbjct: 310 HKRPSENLEIRQCCMRDGHGSITIGSEMAGGVKNLTVRECLFIHTDRGLRIKTRRGRG-- 367
Query: 208 IRNITVSDVYMENAR 222
++ + V EN R
Sbjct: 368 -KDAIIDGVLFENIR 381
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 30 ISFIGENGTIDGQGAIWWNMW--RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
++ GE GTIDG A W N W + RP +I + I+ + QNSP WNIH
Sbjct: 191 VTICGE-GTIDGN-ASWENWWLDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNIH 248
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P +CS++ VT+L P SPNTDG++P+S +V I S GDD +AVK+G G
Sbjct: 249 PYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAK 308
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG-- 205
Y PSS I IR+ I +GSE + G++N+ A N G+ +KT GRG
Sbjct: 309 YKVPSSNIRIRQCCMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRGKD 368
Query: 206 GFIRNITVSDVYMEN 220
I I D+ M++
Sbjct: 369 AVIDGILFEDIRMDS 383
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 135/275 (49%), Gaps = 33/275 (12%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRT-------LPFTRPNLIEFMNSRSIIISNVIF 78
K ++ G +G IDG GA+WW W +R L + R ++I + +++V
Sbjct: 189 KLHDVAITG-SGQIDGNGALWW-AWSERAARAQRGRLVYKRTHMIIIDGCERLRVADVTL 246
Query: 79 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 138
NS +++ P +++ I V + AP ++PNTD IDP S +N I I TGDD + +K
Sbjct: 247 SNSAMFHLVPRRITDLTIERVKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDDNIVIK 306
Query: 139 SGW-----DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVG 193
SG ++ I +GH GI++GSET+ GV N+L +
Sbjct: 307 SGGTNILIEDCVIKHGH-----------------GISIGSETTEGVRNMLVRRCSFDGTD 349
Query: 194 VGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD--HPDDKFNPNALPVVNGIT 251
GI +K+ G GG + NI + + M++ I + D P+ + +P +PV+ I
Sbjct: 350 NGIRIKSMRGAGGVVENIRYTGITMKDVENAIVLDLTYTDNNRPNFRGDPTKIPVIRDIL 409
Query: 252 IKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
I V T ++G I GL +SP +G+ L ++ +Q
Sbjct: 410 IDHVTVTGSLKAGKIVGLPDSPISGVTLRDVTIQA 444
>gi|330816973|ref|YP_004360678.1| glycoside hydrolase family protein [Burkholderia gladioli BSR3]
gi|327369366|gb|AEA60722.1| Glycoside hydrolase, family 28 [Burkholderia gladioli BSR3]
Length = 672
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 14/180 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N QN+PFW HP C+NVVIR ++A + PN DG DPD
Sbjct: 340 YLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIR--GVMADSIGPNNDGFDPD 397
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+ NV + +TGDD +A+KSG D YG P+ ++ T +S GI +GSE
Sbjct: 398 ACRNVLCDGMVFNTGDDCIAIKSGKD-LDTGYG-PAQNHVVQNCTMNSGHGGITLGSEMG 455
Query: 177 GGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 229
GGVEN+ A ++ + N + + I +KTN+ RGGF+RN V V + N G+ + G
Sbjct: 456 GGVENIYARNLTMLNQFWATNSLNIAIRIKTNMNRGGFVRNFYVDGVSLPN---GVSLTG 512
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 126/238 (52%), Gaps = 18/238 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ + ++++I V +NSPFW ++PV C NV ++ I + PN+DG DP+
Sbjct: 224 YLRPPFIQPIRCKNVLIEGVTIKNSPFWLVNPVLCENVTVQ--GIHCESYGPNSDGCDPE 281
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+ +V I++ TGDD +A+KSG + G G S I I + G+ +GSE S
Sbjct: 282 ACKDVLIQNCIFDTGDDCIAIKSGRNADGRRVGVASENILIENCQMKAGHGGVVIGSEIS 341
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GGV N+ ++ + ++ GI +KTN RGG ++N+ ++ + + I I G
Sbjct: 342 GGVRNLYVDNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYEEG 401
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
DVG KF PV+ I I+++W ++ ++G ++P TG+ L N+ V
Sbjct: 402 DVG-----KFT----PVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTFVKV 450
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 133/299 (44%), Gaps = 31/299 (10%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQG--AIWWN-------MWRQRTL 55
L + W A F S E ++ IGE GTIDG WW WR RT+
Sbjct: 170 LYLATWEGEAAECFASLITGINIENVNIIGE-GTIDGNANFETWWKEHKIKKGAWRPRTV 228
Query: 56 PFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 114
F+N ++I+I V +NSP W IHP N+ +TI P +SPNTDG++
Sbjct: 229 ---------FLNQCKNILIEGVTIKNSPAWTIHPFQSENLKFINLTIENPKNSPNTDGLN 279
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
P++S NV I S GDD +A+K+G + G + + +R G+ +GSE
Sbjct: 280 PEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLGKLTEKVFVRNCYMEYGHGGVVIGSE 339
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----D 230
SGGV+ V E N GI +KT GRGGFI I + M + I D
Sbjct: 340 MSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTINSFYFCD 399
Query: 231 VGDHPDDKFNPNALPV------VNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNI 282
V + ++ LP+ + I +K++ T Q +G I GL + + I
Sbjct: 400 VDGKTEYVWSKEKLPIDERTPYIGNIYLKNINCTDTQVAAGFIYGLPERKIEKVIMEEI 458
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 140/301 (46%), Gaps = 45/301 (14%)
Query: 28 EKISFIGENGTIDGQG--AIWWNMWR-------------------QRTLPFT-------- 58
E I+ G+ GT+DGQG WW R +R +P T
Sbjct: 121 ENIAITGK-GTLDGQGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGH 179
Query: 59 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
RPN I+ + I+I V NSP W +HPV C NV + + ++ PNTDG++P+
Sbjct: 180 YLRPNFIQPYRCKDILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIGHG--PNTDGVNPE 237
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I+ + GDD +AVKSG + G PS I I G+ +GSE S
Sbjct: 238 SCKNVVIKGCHFDNGDDCIAVKSGRNADGRRINMPSENIVIEHNEMKDGHGGVTIGSEIS 297
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 231
GGV+NV+AE ++ N+ + +KTN RGG + NI +++ ++ I + +
Sbjct: 298 GGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEE 357
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
GD D K PVV I ++ + Q + +SP TG+ +++ + GV P
Sbjct: 358 GDAGDFK------PVVRNIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPM 411
Query: 292 S 292
Sbjct: 412 E 412
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 15/264 (5%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +DG G WW+ ++ RP + ++ + +N+ W IHP C +
Sbjct: 201 RGILDGSGDKGDWWSWPKETREGARRPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCED 260
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--P 151
+ +TI+AP DSPNTDG +P+S NV I S GDD +AVK+G H
Sbjct: 261 LTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE 320
Query: 152 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
+ GI++R G+ +GSE SGGV +V E ++ G+ +KT GRGG + NI
Sbjct: 321 TRGISVRHCLMQRGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNI 380
Query: 212 TVSDVYMENARKGIKIAG----DVGDHPD--DKFNP----NALPVVNGITIKDVWGTKV- 260
T+ V ++ + + D H D NP + P V+GIT++DV +
Sbjct: 381 TMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLA 440
Query: 261 QQSGLIQGLKNSPFTGICLSNINL 284
+G+ GL +P I + N+ +
Sbjct: 441 HAAGVFLGLPEAPIRNIVVRNLTI 464
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 126/240 (52%), Gaps = 18/240 (7%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RPN ++F +SR+I++ V +NSP W IHPV N+ + V + +P + PN DG++P+SS
Sbjct: 226 RPNFVQFYDSRNILVQGVTLKNSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGVNPESS 284
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
+V I++S GDD +A+KSG + G G PS I I G+ +GSE SG
Sbjct: 285 RDVVIKNSRFDNGDDCIAIKSGRNADGRRIGVPSENILIENNHMQDGHGGVVMGSEMSGS 344
Query: 179 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVS-DVYMENARKGIKI-----AGD 230
V NV A+H ++ N+ + +KTN RGG + N+ + +E + I++ D
Sbjct: 345 VRNVFAQHNVMDSPNLHRALRIKTNSVRGGIVENVYFRHNTVVEIGDEVIRVNFFYEEAD 404
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
G H P+V I I+D+ + + ++G + SP + + +++ GV P
Sbjct: 405 SGPH---------TPIVRNIHIEDLRSDNGEYALYLRGYERSPVSNVTVTDSVFTGVEHP 455
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 122/244 (50%), Gaps = 19/244 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ R + I+ ++I+I V ++SP W IHPV C NV++R V I+ PNTDG++P+
Sbjct: 210 YLRSSFIQPYQCQNILIEGVTVKDSPMWQIHPVLCENVIVRGVNIIG--HGPNTDGVNPE 267
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IED Y GDD +A+KSG +E G G PS I IRR G+ +GSE S
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNEMRDGHGGVTIGSEIS 327
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------A 228
GGV V AE ++ N+ + +KTN RGG I +I + +++ + +
Sbjct: 328 GGVRYVYAEDNIMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEE 387
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
GD G H PVV I ++ + + + I +SP T + + + V
Sbjct: 388 GDAGPHK---------PVVRHIEVEGLKSSGGRYGVKIAAYPHSPVTHFKMKDCVIDDVT 438
Query: 289 GPTS 292
P S
Sbjct: 439 YPLS 442
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 52/310 (16%)
Query: 23 LISKFEKISF-IGENGTIDGQGAI-WWNMWRQRTLP------------------------ 56
LI FE+ + + GT+DGQ ++ W W ++ P
Sbjct: 150 LIYAFEQTNIAVTGKGTLDGQASLDNWLDWNVKSAPGGSKQIPARNRLIEYGAKGTPVDE 209
Query: 57 -------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 109
F RPN ++ +++I +V NSP W IHPV NV +R VT+++ N
Sbjct: 210 RVFGEGDFLRPNFLQPYRCDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVS--HGSN 267
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 169
DG +P+SS +V IE+ TGDD +A+KSG + G PS I +R G+
Sbjct: 268 NDGCNPESSKDVLIENCVFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCKMKDGHGGV 327
Query: 170 AVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IK 226
+GSE SGGV NV E+ + N+ + +KTN RGG I N+ V DV + + IK
Sbjct: 328 VIGSEISGGVRNVFVENCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEVGVVKDSVIK 387
Query: 227 I-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ GD GD PVV + ++ + + + + ++G +++P TGI L +
Sbjct: 388 VNFLYEEGDAGDFA---------PVVRNVVVRRLTSRESKYALFLKGYEHTPITGIRLID 438
Query: 282 INLQGVAGPT 291
+GV P+
Sbjct: 439 CQFEGVQRPS 448
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 20/270 (7%)
Query: 35 ENGTIDGQGAI--------WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
EN I GQG I WW + + + + RP I ++I+I + +NSP W +
Sbjct: 188 ENVRIIGQGVIDANANFDDWWFNPKVKRIAW-RPRSIFLNRCKNILIEGITIRNSPSWTV 246
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HP++C ++ + + I+ P +SPNTDGI+P+S SNV I IS GDD VAVK+G E
Sbjct: 247 HPLFCKDLKLLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQ 306
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
+ PS I IR + +GSE S GV NV + N G+ +KT RGG
Sbjct: 307 KFDVPSENIEIRNCLMEHGHGAVVIGSEMSCGVRNVKVSNCLFVNTDRGLRIKTRRERGG 366
Query: 207 FIRNITVSDVYMENARKGIKIAG--DVGDHPDDKFNPNAL--------PVVNGITIKDVW 256
++ I + +V M + I + G D ++ + + P + I +K+V
Sbjct: 367 YVDEIELKNVQMNGVFVPLAINCFYNCGADYDPLYSSDKVVADVNERTPTIGSIVMKNVL 426
Query: 257 GTKVQ-QSGLIQGLKNSPFTGICLSNINLQ 285
V+ + + GL I + N+ ++
Sbjct: 427 CEDVKSMAAFVYGLPEKKIEKIYMENVRIE 456
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 130/275 (47%), Gaps = 20/275 (7%)
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P+ ++ R + ++N N+PFW +HPVY NV +R + + D PNTDG+DP++
Sbjct: 188 PSFVQPFRCRRVSLANFSLVNAPFWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACK 247
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
+V +E+ IS GDD VA+K+G D G G S I +RR +S F+GI VGSE SGGV
Sbjct: 248 DVLVENCVISAGDDAVALKTGRDADGWRVGVASENIVVRRNVLASRFNGICVGSEVSGGV 307
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD-K 238
+NV + I VK+N RG F+R + V+ V K +AGD +D K
Sbjct: 308 DNVFFLENRIERAFHAIFVKSNSERGSFVRYVHVAHV------KAYDLAGDCIHFTNDYK 361
Query: 239 FNPNALPVV-NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA-----GPTS 292
A P KDV + L SP + + ++ ++ P S
Sbjct: 362 GVRGARPTTFEKFAFKDVICRSAVFAIRATSLAASPIADVTIRDVIVKSTMRTTPDHPVS 421
Query: 293 PPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNH 327
P+ ++V+ W + L + Q SN
Sbjct: 422 HPVAVANVAN-------WEVANLRVNGQAVDLSNR 449
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 16/254 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ + +++ VIFQNSP WN+HP+ C NV+I + + P+ + N D
Sbjct: 219 QSVRHFLRPVMVSLIECKNVWFQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGD 278
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G P + + T G V
Sbjct: 279 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV 338
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME----NAR 222
GSE SGGV NV + VG+ K+ GRGG +IRN+++ D+ E N
Sbjct: 339 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSMMDIPTEPVTFNLY 398
Query: 223 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
G K A +V G+ K +P + P I I ++ + +++ G+ P
Sbjct: 399 YGGKSAVEVLESGEKIPAKVDPLPVDDTTPCFRNIHISNLVCSNARRALFFNGIPEMPID 458
Query: 276 GICLSNINLQGVAG 289
GI L N+++ G
Sbjct: 459 GITLDNLDITSQIG 472
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 138/269 (51%), Gaps = 21/269 (7%)
Query: 37 GTIDGQGAIWWNMWR-QRTLPFTR-----PNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 90
GTI+G G WW+ Q+ P R PNL+ + + I N++ NSP + + P Y
Sbjct: 307 GTINGHGDFWWDRKTDQKYSPSMRKKAHVPNLVHLVGCSDVKIENIVLTNSPHFTVRPQY 366
Query: 91 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD--DLVAVKSGWDEYGIAY 148
C+ V + + I PA+SP T+G+ DS+SN + DS+I+TGD D VA+KSG D +G
Sbjct: 367 CNKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDAVAIKSGKDYHGRKA 426
Query: 149 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI------NLYNVGVGIHVKTNI 202
PS I + VT + ++VGSE SGGV N++ I N + VG VKT
Sbjct: 427 NVPSKNIRVEHVTILGGHA-LSVGSEMSGGVSNIIFSDITFDGRNNKFGVG-SARVKTMR 484
Query: 203 GRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTK 259
GRGG + IT ++ NA +++ + D P P+V I K+V
Sbjct: 485 GRGGVVDQITFQNIRGWNALYALELY-EYYSKQDTNVGPVSREETPIVKNINFKNVHIEG 543
Query: 260 VQQ-SGLIQGLKNSPFTGICLSNINLQGV 287
+++ +G+I GL + + + N++L V
Sbjct: 544 IKRYAGVIAGLPEMAVSNLVIENVHLTNV 572
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 50 WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W +R RP LI F+ + +S V +SPFW IHP+ C NV + V I +
Sbjct: 200 WDERRFGLGQGLRPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--E 257
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
PN DG DP++ NV I++++ TGDD +A+KSG + G + PS I IR
Sbjct: 258 GPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGH 317
Query: 167 SGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
GI +GSE SGG +NV AE + ++ + +KTN RGG I NI + V + ++
Sbjct: 318 GGIVIGSEISGGCKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEA 377
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSP 273
+ + ++ P++ P V + I+DV K LI G LK+
Sbjct: 378 V-VKINLDYEPEEPCYRGFEPEVRDVNIEDVTCRKSAYGVLIVGRDSVENVSDIRLKDCV 436
Query: 274 FTGICLSNINLQG 286
F GI N+ + G
Sbjct: 437 FNGIGRENVRITG 449
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 116/238 (48%), Gaps = 10/238 (4%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F +++ + V NSPFW IHP C NVVIR V + A N DG+DP+
Sbjct: 214 RPQFIQFNRCKNVRMEGVTIINSPFWVIHPYMCHNVVIRNVKVYAHGH--NNDGVDPEMC 271
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IED GDD +A+KSG ++ PS I +R + +A+GSE SGG
Sbjct: 272 ENVLIEDCVFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCLVKNGHQLLAIGSELSGG 331
Query: 179 VENVLAEHINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIK-IAGDVGDH 234
VENV E+ + H +KTN RGG+++N+ V +V + +GI I DV
Sbjct: 332 VENVFLENCTVEENARMFHLVFIKTNERRGGYVKNVYVRNVTADKMSQGILGIDTDVLYQ 391
Query: 235 PDD---KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
D + P ++ + + D+ KV I P I L NI ++ + G
Sbjct: 392 WRDLVPTYEKRLTP-ISDVYLTDIKANKVNFLSRILAQDALPVKNIRLKNIRVEQITG 448
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 115/255 (45%), Gaps = 24/255 (9%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q PF RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSIRPFLRPVMVSLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGD 279
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G P + + T G V
Sbjct: 280 GLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCTVFKGHGGFVV 339
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM------------- 218
GSE SGGV NV + VG+ K+ GRGG + NI V +V M
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSMIDIATEPVTFNLY 399
Query: 219 -------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
E G + +V P D+ P I I+ + +++ G+
Sbjct: 400 YGGKSAVEVLESGEVVPAEVPAMPVDE----TTPCFRNIHIERLTCAGARRAMYFNGIPE 455
Query: 272 SPFTGICLSNINLQG 286
P GI L ++ ++
Sbjct: 456 MPIDGITLKHVRIRA 470
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 20/237 (8%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++ +++++ V NSP W ++PV C NV I VT+ + PN+DG DP+
Sbjct: 221 YLRPQFVQPYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTV--ESHGPNSDGCDPE 278
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS NV I+D Y +TGDD +A+KSG + G PS I I+ + G+ +GSE S
Sbjct: 279 SSKNVLIKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCKMADGHGGVVIGSEIS 338
Query: 177 GGVENVLAE--HINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAG 229
GGV NV AE +N ++ + +KT+ RGG ++RNI V + + R +
Sbjct: 339 GGVRNVFAENCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVGQIAQQVVRVNM-FYE 397
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQ 285
D G + +P V I ++++ + G L++G +NSP I L N+N++
Sbjct: 398 DSGAY---------VPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNIK 445
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 129/292 (44%), Gaps = 33/292 (11%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQR-----TLP-------------------FTRPNL 62
+S +G+ G IDG A + WR R TL + RP L
Sbjct: 142 LHDVSIVGK-GLIDGNCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQL 200
Query: 63 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 122
I+ R++ I V NSPFW IH + NV+ R + A N DGIDP+SS NV
Sbjct: 201 IQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPESSRNVL 258
Query: 123 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 182
IED GDD VA+KSG D G + HPS I IRR + +GSE SGGV NV
Sbjct: 259 IEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMSGGVRNV 317
Query: 183 LAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 241
E + G+++KTN RGG+++NI + D + I + + +
Sbjct: 318 FVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYAGEGLGS 374
Query: 242 NALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 292
V + + V + + +G++ QG K P + + + + V S
Sbjct: 375 RHFSEVEHLLVDGVSCRRARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 426
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP++
Sbjct: 230 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 287
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE SGG
Sbjct: 288 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEISGG 347
Query: 179 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 235
ENV AE +++ + + +KTN RGG I+NI + +V + ++ + KI D P
Sbjct: 348 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY--EP 405
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 287
+ P V + +++V K + L+ GL I +SN GV
Sbjct: 406 REACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 458
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP++
Sbjct: 210 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 267
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE SGG
Sbjct: 268 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEISGG 327
Query: 179 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 235
ENV AE +++ + + +KTN RGG I+NI + +V + ++ + KI D P
Sbjct: 328 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY--EP 385
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 287
+ P V + +++V K + L+ GL I +SN GV
Sbjct: 386 REACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 438
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 120/254 (47%), Gaps = 16/254 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 279
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G G + + T G V
Sbjct: 280 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFVV 339
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME----NAR 222
GSE SGGV NV + VG+ K+ GRGG +IRNI + D+ E N
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPITFNLY 399
Query: 223 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
G K A +V G+ K P P I +K++ +++ G+ P
Sbjct: 400 YGGKSAVEVLESGEKVLAKVEPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPID 459
Query: 276 GICLSNINLQGVAG 289
GI L +I++ G
Sbjct: 460 GIVLEDIDITSKLG 473
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 36/315 (11%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMW---------RQRTL 55
+++ W ++ + + I+ GE GTIDG+G W + R R +
Sbjct: 119 MVLTSWEGTMLYNYSPLIYANNCTNIAISGE-GTIDGEGGKTWKTFKAKENEGKNRSRDM 177
Query: 56 P---------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 100
F RP +I+F+N ++I++ N+ +NSPFW +H + ++ IR ++
Sbjct: 178 NHNNTPLSERKFGEGYFLRPQMIQFLNCKNILVENIRIENSPFWCLHLLKSESITIRGIS 237
Query: 101 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA-YGHPSSGITIRR 159
+ + N DGIDP+ + +V IE+ GDD VA+K+G D G A PS I IR
Sbjct: 238 Y--KSLNHNNDGIDPEYAKDVLIENVTFDNGDDNVAIKAGRDHEGRANTATPSQNIIIRN 295
Query: 160 VTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYM 218
G+ +GSE S GV+NV E+ + GI++KTN RGG+I+NI V ++ +
Sbjct: 296 CNFKG-LHGVVIGSEMSAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNIFVRNIQL 354
Query: 219 ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGI 277
+ + I + H + K V+ + ++ K +SG+ IQG + I
Sbjct: 355 DQVEDCLYITANY--HGEGK---GYQSDVSNVYFSNITCNKASESGIVIQGFADKKIKNI 409
Query: 278 CLSNINLQGVAGPTS 292
L NI ++ S
Sbjct: 410 SLKNIEIKEAKNALS 424
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 50 WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W +R RP LI F+ + +S V +SPFW IHP+ C NV + V I +
Sbjct: 198 WDERRFGLGQGLRPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--E 255
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
PN DG DP++ NV I++++ TGDD +A+KSG + G + PS I IR
Sbjct: 256 GPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGH 315
Query: 167 SGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
GI +GSE SGG +NV AE + ++ + +KTN RGG I NI + V + ++
Sbjct: 316 GGIVIGSEISGGCKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEA 375
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSP 273
+ + ++ P++ P V + ++DV K LI G LK+
Sbjct: 376 V-VKINLDYEPEEPCYRGFEPEVRDVNVEDVTCRKSAYGVLIVGRDSVENVSDIRLKDCV 434
Query: 274 FTGICLSNINLQG 286
F GI N+ + G
Sbjct: 435 FNGIGRENVRITG 447
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP++
Sbjct: 200 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 257
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE SGG
Sbjct: 258 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEISGG 317
Query: 179 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 235
ENV AE +++ + + +KTN RGG I+NI + +V + ++ + KI D P
Sbjct: 318 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY--EP 375
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 287
+ P V + +++V K + L+ GL I +SN GV
Sbjct: 376 REACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 428
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 16/242 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ S++++I++V N+PFWNI+PV C NV +R V ++ PN DG DP+
Sbjct: 216 YLRPPFIQPYLSKNVLIADVKIINAPFWNINPVLCENVTVRNVKVVT--HGPNNDGCDPE 273
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I Y TGDD +A+KSG +E G P+ I G+ +GSE S
Sbjct: 274 SCKNVLITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENCEMKDGHGGVVIGSEIS 333
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GG N+ A+++ + N+ + +KT+ RGG I N+ + +V + ++ + +
Sbjct: 334 GGARNIFAQNLIMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAILCDMFYEK 393
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQGVAGP 290
P D LP + I+++++ ++Q G LI K SP + +SN + GV P
Sbjct: 394 PGD-----FLPTIRNISVENL---NIKQGGKFGVLINAYKESPVENLRISNSTINGVKIP 445
Query: 291 TS 292
Sbjct: 446 VQ 447
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 135/288 (46%), Gaps = 46/288 (15%)
Query: 37 GTIDGQGA--IWWNM-------W-----------RQRTLPFT-----------------R 59
GTIDGQG+ WW M W R+R + + R
Sbjct: 169 GTIDGQGSNETWWPMCGAAHYGWKEGMHSQKLGSRERLMGYAELKRPIYERAMTPEDALR 228
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LI F +I+I +V NSPFW IHP+ C ++++R V I PN DG DP+S
Sbjct: 229 PQLINFYLCNTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYNRG--PNGDGCDPESCK 286
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 287 NVLIENCRFDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKNGHGGVVIGSEISGGY 346
Query: 180 ENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
N+ E+ ++ + I +KTN RGG + N+ V ++ + + + + ++ +
Sbjct: 347 RNLYVENCVMDSPQLDRVIRIKTNDCRGGIVENVFVRNIKVGQCHEAV-LKINLLYESKE 405
Query: 238 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
N P+V + +K++ Q GL N C+ NI+++
Sbjct: 406 NCNRAFPPIVRNVHLKNITCENSQYGIYAVGLPNKD----CVYNISVE 449
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLP------------------------FTRPNL 62
+S +G+ G IDG A + WR R + RP L
Sbjct: 142 LHDVSIVGK-GLIDGNCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQL 200
Query: 63 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 122
I+ R++ I V NSPFW IH + NV+ R + A N DGIDP+SS NV
Sbjct: 201 IQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPESSRNVL 258
Query: 123 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 182
IED GDD VA+KSG D G + HPS I IRR + +GSE SGGV NV
Sbjct: 259 IEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMSGGVRNV 317
Query: 183 LAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP 241
E + G+++KTN RGG+++NI + D + I + + +
Sbjct: 318 FVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYAGEGLGS 374
Query: 242 NALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 292
V + + V + + +G++ QG K P + + + + V S
Sbjct: 375 RHFSEVEHLLVDGVSCRRARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 426
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Query: 30 ISFIGENGTIDGQGAI-WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 88
++ IGE G +DG G+I WW+ + R + + RP L + ++S + + + QNSP W +HP
Sbjct: 193 VNLIGE-GVLDGNGSIGWWDFPKVRNVAW-RPRLFQIIHSHHVNVQGITLQNSPSWTVHP 250
Query: 89 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 148
++ ++ + I+ P DSPNTDG+DP+S V I + S GDD +A+KSG G
Sbjct: 251 LFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRL 310
Query: 149 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--G 206
S ITIR + + + +GSE +GGV+++L E G+ +KT GRG
Sbjct: 311 KRASEYITIRNCSMNFGHGAVVIGSEMAGGVKHILVEQCLFNETDRGLRIKTRRGRGEAA 370
Query: 207 FIRNITVSDVYMENA 221
+ ++T + ME
Sbjct: 371 IVEDVTFRHIEMEKV 385
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 143/308 (46%), Gaps = 47/308 (15%)
Query: 23 LISKFE--KISFIGENGTIDGQG--AIWWNMWR-------------------QRTLPFT- 58
LI +E I+ G+ GT+DGQG WW R +R +P T
Sbjct: 114 LIYAYEADNIAITGK-GTLDGQGDDEHWWPWKRGTNGQPSQEKDRNALFEMAERGIPVTE 172
Query: 59 ---------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 109
RPN I+ + I+I V NSP W +HPV C NV + + ++ PN
Sbjct: 173 RQFGKGHYLRPNFIQPYRCKHILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPN 230
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 169
TDG++P+S NV I+ + GDD +AVKSG + G PS I I G+
Sbjct: 231 TDGVNPESCKNVVIKGCHFDNGDDCIAVKSGRNADGRRINIPSENIVIEHNEMKDGHGGV 290
Query: 170 AVGSETSGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---G 224
+GSE SGGV+NV+AE ++ N+ + +KTN RGG + NI +++ ++
Sbjct: 291 TIGSEISGGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIA 350
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
I + + GD D K PVV + +K + Q + +SP TG+ +++ +
Sbjct: 351 IDMEYEEGDAGDFK------PVVRTVDVKQLKSMGGQYGIRVLAYDHSPVTGLKVADSEI 404
Query: 285 QGVAGPTS 292
GV P
Sbjct: 405 DGVDVPME 412
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 119/232 (51%), Gaps = 16/232 (6%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP L+ F+ S I+I +V NSPFW +HP+ C ++ + VT+ + PN DG DP++
Sbjct: 214 RPQLVNFVRSERILIKDVKMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEAC 271
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I++ TGDD +A+KSG + G + PS I IR G+ +GSE SGG
Sbjct: 272 ENVLIQNCIFHTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCRMEDGHGGVVIGSEISGG 331
Query: 179 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
ENV AE+ + + + + +KTN RGG I+NI + V + ++ + + ++ P
Sbjct: 332 CENVYAENCEMDSPHLERILRIKTNNCRGGLIQNIHMRKVTVGQCKEAV-LKINLDYEPR 390
Query: 237 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGI 277
+ P V ++++DV K LI G +KN F G+
Sbjct: 391 EACYRGFEPTVRNVSMEDVTCQKSNYGVLIIGGNKVENVYDIHVKNCKFDGV 442
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 24/241 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ ++++I +V N+P WN+HPV C NV + V I PN DG DP+
Sbjct: 220 FMRPQFVQPFECKNVLIQDVKLINAPMWNLHPVLCENVTVERVKI--ETLGPNNDGCDPE 277
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+ NV I+D Y TGDD +A+KSG +E G G PS I I G+ +GSE S
Sbjct: 278 ACKNVLIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCEMKEGHGGVVIGSEIS 337
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDV----YMENARKGIKIAGD 230
GG NV A+++ + N+ + +KT+ RGG + NI + DV Y E A + +
Sbjct: 338 GGARNVFAQNLVMDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGTYREAAVRFNMFYEE 397
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQG 286
GDH +P + + ++++ +V+ G + ++SP T + N +
Sbjct: 398 EGDH---------IPTIRNVIVENL---QVKNGGKYAVMANAYESSPVTNFQMINCRIDS 445
Query: 287 V 287
V
Sbjct: 446 V 446
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 21/244 (8%)
Query: 51 RQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 107
R+R F RP ++F + + I++ + N+PFW IHPV +V IR V +
Sbjct: 215 RERVFADGGFLRPPFLQFYDCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVH--CQSYG 272
Query: 108 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 167
PN+DG DP+S V IED TGDD +A+KSG + G G P + ++
Sbjct: 273 PNSDGCDPESCERVVIEDCVFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKEGHG 332
Query: 168 GIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
G+ +GSE SGGV NV H + ++ I +KTN RGG I ++ S + + + +
Sbjct: 333 GVVIGSEISGGVANVHVRHCTMDSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVF 392
Query: 226 KI-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 280
I GD G +P+V I I D+ K Q+ ++G SP T + L
Sbjct: 393 VINFYYEEGDRG---------KWMPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLR 443
Query: 281 NINL 284
N N+
Sbjct: 444 NWNV 447
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Query: 30 ISFIGENGTIDGQGAI-WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 88
++ IGE G +DG G+I WW+ + R + + RP L + ++S + + + QNSP W +HP
Sbjct: 82 VNLIGE-GVLDGNGSIGWWDFPKVRNVAW-RPRLFQIIHSHHVNVQGITLQNSPSWTVHP 139
Query: 89 VYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY 148
++ ++ + I+ P DSPNTDG+DP+S V I + S GDD +A+KSG G
Sbjct: 140 LFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRL 199
Query: 149 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--G 206
S ITIR + + + +GSE +GGV+++L E G+ +KT GRG
Sbjct: 200 KRASEYITIRNCSMNFGHGAVVIGSEMAGGVKHILVEQCLFNETDRGLRIKTRRGRGEAA 259
Query: 207 FIRNITVSDVYMENA 221
+ ++T + ME
Sbjct: 260 IVEDVTFRHIEMEKV 274
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 137/298 (45%), Gaps = 46/298 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNS 68
E +S G GTIDGQG IWW + R L + RP I S
Sbjct: 98 ENVSITG-TGTIDGQGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFES 156
Query: 69 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 128
+SI++ + + S FWN+H Y + + V I A P+TDGID DS V +E +
Sbjct: 157 QSILLRDFTSRESGFWNMHLCYSRRITVEGVQISNSA-GPSTDGIDIDSCEQVRVERCIV 215
Query: 129 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 188
S DD + +KSG + I IR T + SGI +GSETSGG+E VL E
Sbjct: 216 SCNDDNICIKSGRGREAAQKARTARDIVIRGCT-LNKGSGITLGSETSGGIERVLIEDNA 274
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA------------GDVGDHPD 236
GVG +K+ RGGFIR+ITV ++++ + R + I G++ D P+
Sbjct: 275 FNGTGVGFRIKSARNRGGFIRDITVQNLHLTDVRFPVLIQLNWFPQYSYGDRGNLSDKPE 334
Query: 237 D--KF-----NPNALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNI 282
K L V+G+TIK++ + ++ I+G P TG+ L I
Sbjct: 335 HWRKLAEGVEGEAGLTAVSGLTIKNMSAHRSDNKYFSRAFFIEGYPERPVTGLTLDGI 392
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 68/89 (76%)
Query: 27 FEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+ G NGTIDGQG +WW +WR RTL TR +LIE +NS +++IS+V NSPFW +
Sbjct: 192 LNDVVITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTV 251
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDP 115
HPVYCSNVV++ +TILAP D+PNTDGIDP
Sbjct: 252 HPVYCSNVVMKDLTILAPLDAPNTDGIDP 280
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLP-----FT----RPNLIEFMNSRSIIISNVIFQNSPFW 84
G G I+ + + +R +P FT RPN ++F S I++S V NSP W
Sbjct: 189 GRGGVIETEHRDALHAMAERGVPVEQRRFTDSKLRPNFVQFYRSSDILVSGVTLTNSPMW 248
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
IHPV NV++ VT+ +P D PN+DG++P+SS NV I +S GDD +A+KSG +
Sbjct: 249 MIHPVLSENVIVDGVTLDSP-DGPNSDGVNPESSRNVVIRNSSFDNGDDCIAIKSGRNAD 307
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYNVGVGIHVKTNI 202
G G PS I I G+ +GSE SG V NV AE ++ + + +KTN
Sbjct: 308 GRRIGVPSENIVIHDNRMFDGHGGVVIGSEMSGDVRNVFAERNVMDSPRLDRALRIKTNS 367
Query: 203 GRGGFIRNITVSDVYM-ENARKGIKI-----AGDVGDHPDDKFNPNALPVVNGITIKDVW 256
RGG + + D + E A I++ GD GD P V G+ I++V
Sbjct: 368 VRGGTVEGVYFRDNDIPEVADAVIRVNFHYEEGDTGD---------FTPTVRGLHIENVH 418
Query: 257 GTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
+ + ++G + SP T + + + V P
Sbjct: 419 SVGGEFALYLRGYERSPVTDVTIRDSTFSEVTTP 452
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 23/267 (8%)
Query: 46 WWNMWRQ-RTLP-------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIR 97
W N+W + +TL F RPN+I +++I V FQNSP W +HP+ ++ +R
Sbjct: 427 WANLWVEGKTLEDYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLR 486
Query: 98 YVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI 157
V + P N D +D +S S ++ TGDD + +KSG DE G G P+ + I
Sbjct: 487 NVNVRNPWFGQNNDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVII 546
Query: 158 RRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVY 217
+ T G +GSE SGGV+NV ++ + +G+ KT RGG + NI +S++
Sbjct: 547 KNTTVFHGHGGFVIGSEMSGGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIA 606
Query: 218 MEN-------------ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQ 262
M N A+ + + GD P P P IK+V
Sbjct: 607 MNNIPGEAILFDMYYEAKDPVPLDGDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAVS 666
Query: 263 SGLIQGLKNSPFTGICLSNINLQGVAG 289
+ +++GL P GI + + + + G
Sbjct: 667 AIVLRGLPEMPIRGIKIEDSHFKSDKG 693
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 124/237 (52%), Gaps = 7/237 (2%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ +EF N ++++ ++ ++SPFWNIHPV NV++R V ++ PN DG +P+
Sbjct: 215 YLRPSFVEFYNCENVLVEDIHLKDSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPE 272
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S ++ IE+ Y TGDD +A+KSG + G PS I IR + G+ +GSE S
Sbjct: 273 SVDHMLIENCYFDTGDDCIAIKSGRNADGRRVAVPSENILIRNCQMKAGHGGVVIGSEIS 332
Query: 177 GGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
G V NV AE ++ ++ + +K N RGG + NI + ++ + + + I +
Sbjct: 333 GDVFNVYAEGCAMDSPDLWYMLRIKNNAMRGGVVENIHLRNIEVGQVARAVMIC---DFN 389
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
++ N PV+ ++++ + K + QG + I L + GV+ P+
Sbjct: 390 YEEGINGPFTPVLRNVSMQSIAVKKAVRVLDSQGFAKAEIENISLKDCIFNGVSSPS 446
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 219 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 278
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G + + T G V
Sbjct: 279 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCTVFKGHGGFVV 338
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NAR 222
GSE SGGV NV + VG+ K+ GRGG + NI V +V M N
Sbjct: 339 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNLY 398
Query: 223 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
G K A +V G+ K +P P I I ++ + +++ G+ P
Sbjct: 399 YGGKSAVEVLESGEKVPLKVDPLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPID 458
Query: 276 GICLSNINLQGVAG 289
GI L N+++ G
Sbjct: 459 GITLENLDITSQIG 472
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 227 IAG 229
+ G
Sbjct: 503 LKG 505
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 19/244 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ R + I+ N ++I+I V ++SP W +HPV NV++R V I+ PNTDG++P+
Sbjct: 210 YLRSSFIQPYNCQNILIEGVTVKDSPMWQVHPVLSENVIVRGVNIIGHG--PNTDGVNPE 267
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S +V IED Y GDD +A+KSG +E G G PS I IRR T G+ +GSE S
Sbjct: 268 SCRHVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNTMRDGHGGVTIGSEIS 327
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------A 228
GGV+ V AE ++ N+ + +KTN RGG I +I + +++ + +
Sbjct: 328 GGVKYVYAEDNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNLVKSLKHEVVCIDMMYEE 387
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
GD G H PVV I ++ + + + I +SP T + + + V
Sbjct: 388 GDAGPH---------RPVVRHIEVEGLKSSGGRYGVKIAAYSHSPVTHFKMKDCVIDDVT 438
Query: 289 GPTS 292
P S
Sbjct: 439 YPLS 442
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV++ V + P+ + N D
Sbjct: 230 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGD 289
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G P + + T G V
Sbjct: 290 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV 349
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NAR 222
GSE SGGV NV + VG+ K+ GRGG + NI +++V M N
Sbjct: 350 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFNLY 409
Query: 223 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
G K A +V G+ K +P P I +K++ +++ G+ P
Sbjct: 410 YGGKSAVEVLESGEKVPAKVDPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPIE 469
Query: 276 GICLSNINLQGVAG 289
+ L ++++ G
Sbjct: 470 NVVLEDVDITSRLG 483
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 125/270 (46%), Gaps = 17/270 (6%)
Query: 30 ISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
+ IG+ G IDG + WW +++ + + RP LI N R I+I V QNSP W IH
Sbjct: 194 VKIIGK-GIIDGNASFDNWWKDAKKKRVAW-RPRLIFIKNCRDILIEEVTVQNSPSWTIH 251
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P++ N+ + + ++ P DSPNTDGI+P+S NV I S GDD +A+KSG G
Sbjct: 252 PMFSQNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIAIKSGKLYLGQR 311
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG-- 205
S I IR GI +GSE +GGV+NV A GI +KT GRG
Sbjct: 312 LKIASQDIMIRNCHMKFGHGGIVIGSEMAGGVKNVSAIRCIFEETDRGIRIKTRRGRGKD 371
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN----------PNALPVVNGITIKDV 255
G I I ++ M+ I PD K PVV + +K++
Sbjct: 372 GVINGINAENIVMKKVLTPFVINTFYFCDPDGKTEYVWSKEKLPVDERTPVVKNVYLKNM 431
Query: 256 WGTKVQ-QSGLIQGLKNSPFTGICLSNINL 284
+ +G I GL I L +I +
Sbjct: 432 ICEDCEVAAGFIYGLPECKIENIILEDIKV 461
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 116/258 (44%), Gaps = 24/258 (9%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV++ V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGD 279
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G P + + T G V
Sbjct: 280 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV 339
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM------------- 218
GSE SGGV NV + VG+ K+ GRGG + NI +++V M
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFNLY 399
Query: 219 -------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
E G K+ V P D+ P I +K++ +++ G+
Sbjct: 400 YGGKSAVEVLESGEKVPAKVEPLPVDE----TTPCFRNIHVKNLICAGARRALFFNGIPE 455
Query: 272 SPFTGICLSNINLQGVAG 289
P + L +I++ G
Sbjct: 456 MPIENVVLEDIDITSRLG 473
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ + R++ + VIFQNSP WN+HP+ C NV++ V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNGD 279
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G + + T G V
Sbjct: 280 GLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCTVFKGHGGFVV 339
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NAR 222
GSE SGGV NV + VG+ K+ GRGG + NI V++V M N
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIPTEPITFNLY 399
Query: 223 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
G K A +V G+ K P P I ++++ +++ G+ P
Sbjct: 400 YGGKSAVEVLESGETVPAKVEPLPVDETTPCFRNIHVRNLVCAGARRALFFNGIPEMPID 459
Query: 276 GICLSNINLQGVAG 289
GI L +I++ G
Sbjct: 460 GIVLEDIDITSRLG 473
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 227 IAG 229
+ G
Sbjct: 503 LKG 505
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 125/236 (52%), Gaps = 18/236 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ +++I V SPFW ++PV C NV + + + PN+DG DP+
Sbjct: 233 YLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPE 290
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S +NV I + TGDD +A+KSG + G P S I I + G+ +GSE S
Sbjct: 291 SCTNVIISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIIIEHCEMKAGHGGVVIGSEIS 350
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GGVEN+ A++ + ++ GI +KTN RGG ++N+ ++ + + + + G
Sbjct: 351 GGVENLYAQYCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEG 410
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
D G+ P P++ ITI+++ ++ +++G ++P +G+ L+N+ ++
Sbjct: 411 DAGNFP---------PLLEDITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTIK 457
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 227 IAG 229
+ G
Sbjct: 503 LKG 505
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 140/301 (46%), Gaps = 45/301 (14%)
Query: 28 EKISFIGENGTIDGQG--AIWWNMWR-------------------QRTLPFT-------- 58
E I+ G+ GT+DGQG WW R +R +P T
Sbjct: 121 ENIAITGK-GTLDGQGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGH 179
Query: 59 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
RPN I+ + I+I V NSP W +HPV C NV + + ++ PNTDG++P+
Sbjct: 180 YLRPNFIQPYRCKDILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPE 237
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I+ + +GDD +AVKSG + PS I I G+ +GSE S
Sbjct: 238 SCKNVVIKGCHFDSGDDCIAVKSGRNADARRINMPSENIVIEHNEMKDGHGGVTIGSEIS 297
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 231
GGV+NV+AE ++ N+ + +KTN RGG + NI +++ ++ I + +
Sbjct: 298 GGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEE 357
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
GD D K PVV I ++ + Q + +SP TG+ +++ + GV P
Sbjct: 358 GDAGDFK------PVVRNIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPM 411
Query: 292 S 292
Sbjct: 412 E 412
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 283 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 340
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 341 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 395
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 396 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 452
Query: 227 IAG 229
+ G
Sbjct: 453 LKG 455
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 21/240 (8%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPNL+ N + I++S FQNS W +HP + I+ +T+ P + N DG+D D
Sbjct: 196 YLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDID 255
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S V +E+S GDD + +KSG +E G G PS I+IR T GI VGSE S
Sbjct: 256 SCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGGIVVGSEMS 315
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV----- 231
GG+++V +GI K+ GRGG + NI + + M + I GD
Sbjct: 316 GGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRD------IDGDAISFNL 369
Query: 232 --------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
G++ ++ P PV I I+D+ + + LI GL P + +
Sbjct: 370 YYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTVKR 429
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 16/254 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 279
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G G + + T G V
Sbjct: 280 GLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCTVFKGHGGFVV 339
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME----NAR 222
GSE SGGV NV + VG+ K+ GRGG +IRNI++ D+ E N
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPITFNLY 399
Query: 223 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
G K A +V G+ K P P I ++++ +++ G+ P
Sbjct: 400 YGGKSAVEVLESGEVVPAKVEPMPVDETTPCFRNIHVENLVCAGARRALFFNGIPEMPID 459
Query: 276 GICLSNINLQGVAG 289
GI L N+++ G
Sbjct: 460 GITLKNVDISSKLG 473
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 138/302 (45%), Gaps = 46/302 (15%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIE 64
I + E +S G GTIDGQGAIWW + R L + RP I
Sbjct: 94 IIECENVSITG-TGTIDGQGAIWWQRFWGDDERSGMVEDYSARGLRWVVDYDCQRPRNIL 152
Query: 65 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 124
S++I++ + + S FWN+H Y ++ + V I A P+TDGID DS V +E
Sbjct: 153 IFESQTILLRDFTSRESGFWNMHLCYSRHIEVEGVQISNSA-GPSTDGIDIDSCEQVRVE 211
Query: 125 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 184
+S DD + +KSG + I IR T + SGI +GSETSGG+E VL
Sbjct: 212 RCIVSCNDDNICIKSGRGYEAAQKARTARDIVIRGCT-LNKGSGITLGSETSGGIERVLI 270
Query: 185 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA------------GDVG 232
E GVG +K+ RGGFIR+I V ++ + + R + I GD+
Sbjct: 271 EDNAFNGTGVGFRIKSARNRGGFIRDIIVQNLRLTDVRFPVLIQLNWFPQYSYGDRGDLA 330
Query: 233 DHPDDKFNPNA-------LPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLS 280
D P+ A L VV+G+TI ++ + ++ I+G P G+ L
Sbjct: 331 DKPEHWRKLAAGVEGDAGLTVVSGLTINNITARRSDNKCFSRAFFIEGYPERPVAGLTLE 390
Query: 281 NI 282
I
Sbjct: 391 GI 392
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 20/265 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPNLI + +++ V FQNS W +HP+ ++ +R VT+ P + N DGID +
Sbjct: 214 FLRPNLIVLTKCKKVLLEGVTFQNSAAWCLHPLMSEDLTVRNVTVKNPWFAQNGDGIDVE 273
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S + V IE+S GDD + +KSG DE G G P+ + IR G +GSE S
Sbjct: 274 SCNRVLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRDCKVYHAHGGFVIGSEMS 333
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GG N+ + +G+ KT GRGG + NI +D+ M + +
Sbjct: 334 GGARNIWVNNCTFIGTDIGLRFKTTRGRGGIVENIYCNDIQMIDIPGEAILFDMYYMSVD 393
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ +AG+ + P + P P +K+V + ++G+ + L N
Sbjct: 394 PVALAGEKRELPKVEKLPVDEGTPQFRNFVVKNVVCNGAAKGIFLRGIPEMHVKDVLLEN 453
Query: 282 INLQGVAGPTSPPLKCSDVSGSAYQ 306
LQ G + C + SG ++
Sbjct: 454 CILQARKG-----IDCQEASGITFK 473
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 149/303 (49%), Gaps = 29/303 (9%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
KI+ +G G+I+G A+ ++ P RP LIEF+ + + + W+IH
Sbjct: 146 RKIAVLGP-GSIEGNVAVAGRPTKEN--PLRRPALIEFLYCDDVHLEGFSTSYAHMWSIH 202
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P C N+V R +T+ + N DGID DS +V I+ I++GDD +++KSG E
Sbjct: 203 PTCCDNLVFRNLTVRSTLT--NGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRGEEAYQ 260
Query: 148 YGHPSSGITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNV-GVGIHVKTNIGRG 205
P+ + I T F+ I +GSETS G+ VL E + +V +++K+ +GRG
Sbjct: 261 LARPTEDVRIVNCTLEGRGFACIGIGSETSAGIRRVLIEGCRVTSVYKFAVYIKSRVGRG 320
Query: 206 GFIRNITVSDVYMENARKG-IKIAGDVGDHPDDKFNP--NALPVVNGIT-----IKD--- 254
FI ++TV D+ R G +KI+ D+ P + LP+ I+ + D
Sbjct: 321 AFIEDLTVRDMSAAKMRMGFLKISQTSAGVQDENPVPGLDGLPLFRNISFLRIHVDDAPV 380
Query: 255 -VWGTKVQQSGLIQGLKNSPFTGIC-----LSNI---NLQGVA--GPTSPPLKCSDVSGS 303
V ++ L+ GL FTG C L+NI L+G+A G T P L+ +V+G
Sbjct: 381 LVEAKEISADKLLDGLTLDGFTGTCAKGLELANITHATLRGIAVSGFTGPLLRIDNVTGK 440
Query: 304 AYQ 306
Q
Sbjct: 441 GLQ 443
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 15/248 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPNL+ + +++ V FQNSP WN+HP+ ++ IR V P + N DG+D +
Sbjct: 222 FLRPNLLVLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIE 281
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV +E S GDD + +KSG D G P+ + IR T G +GSE S
Sbjct: 282 SCKNVLVEGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRHSTVYHAHGGFVIGSEMS 341
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GG +N+ +G+ KT GRGG + NI ++ M++ A
Sbjct: 342 GGAKNIFISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIPGEAILFDMYYAAVD 401
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ + G+ + P + P PV I +V ++ I+GL + I L N
Sbjct: 402 PVPLTGEKRETPKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIRGLPEMSISDIFLDN 461
Query: 282 INLQGVAG 289
+ ++ G
Sbjct: 462 LTIKAKEG 469
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 125/243 (51%), Gaps = 22/243 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN ++ S++ +++V+ +NSP WN++PV C NV+I V +++ PN DG DP+
Sbjct: 212 YLRPNFVQPYKSKNFYMADVLVKNSPMWNLNPVLCENVLIERVKVIS--HGPNNDGFDPE 269
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+ NV I+DSY TGDD +A+KSG DE G G P+ I G+ +GSE +
Sbjct: 270 ACKNVWIKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENCEMKDGHGGVVIGSEIA 329
Query: 177 GGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GG +N+ A ++ N+ + +KT+ RGG I N V+ N + G V
Sbjct: 330 GGAKNIYAIGNVMDSKNLERALRIKTSSNRGGIIEN-----VFFYNTKVGAYKEAAV--- 381
Query: 235 PDDKFNPNALPVVNGI-TIKDVW--GTKVQQSG----LIQGLKNSPFTGICLSNINLQGV 287
+FN + N I TI+++W V++ G L ++SP T + N + V
Sbjct: 382 ---RFNMHYEKPGNFIPTIRNIWVENLTVEKGGKYAILSDAYESSPVTDFTMVNAKINNV 438
Query: 288 AGP 290
P
Sbjct: 439 EIP 441
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 445
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N
Sbjct: 446 EMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN 499
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 20/258 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN+I +++++ V FQNSP W +HP+ C +V IR VT+ + N+D +D +
Sbjct: 449 FLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKNHWYAQNSDALDLE 508
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N +E TGDD + +KSG DE G G P+ I+ G +GSE S
Sbjct: 509 SCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCKVYHAHGGFVIGSEMS 568
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GGV N+ + VG+ KT GRGG + +I V+DV M A+
Sbjct: 569 GGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTEIPGEAILFDMYYAAKD 628
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ G+ + P K P P +K++ + + L++GL + + N
Sbjct: 629 PVPQEGESNELPAIKAEPLNEGTPQFKNFYLKNIICRGAETAILVRGLPE-----MSIKN 683
Query: 282 INLQGVAGPTSPPLKCSD 299
IN++ + L C +
Sbjct: 684 INVENAVIEANKGLVCVE 701
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 445
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N
Sbjct: 446 EMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN 499
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 8/219 (3%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ ++ +++I ++ N+PFW +HP NV +R V + + PN+DG DP+
Sbjct: 211 YLRPSFVQPYKCENVLIEDITIINAPFWLLHPTLSQNVTVRGVHL--ESLGPNSDGCDPE 268
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE+ + +TGDD +A+KSG + G P+ + IR + G+ +GSE S
Sbjct: 269 SCKNVVIENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCKMEAGHGGVVIGSEIS 328
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GGV NV AE+ ++ ++ GI +KTN RGG + NI V + + ++ I I +
Sbjct: 329 GGVRNVFAENNVMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVINFQYEEG 388
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 273
KF+ P V + I+++ Q I+G + +P
Sbjct: 389 DAGKFD----PTVRNVEIRNLVCQHALQVFNIRGFERAP 423
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 132/286 (46%), Gaps = 15/286 (5%)
Query: 18 FLSDFLISKFEKISFIGENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISN 75
F S F ++ GE GTIDG WW + + + + RP I + +I I
Sbjct: 178 FASLFTGVSVNNVNITGE-GTIDGNSDRETWWKDAKIKRISW-RPRTIFLTDCSNINIVG 235
Query: 76 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
+ +NSP W +HPV+ SN+ + I P DSPNTDGIDP+S NV I S GDD +
Sbjct: 236 INIENSPSWTLHPVFSSNLGFFDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCI 295
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
A+KSG + G G PS I I G+ +GSE SGG++NV ++ N G
Sbjct: 296 AIKSGKGKIGREIGIPSENINIENCHMEFGHGGVVIGSEMSGGIKNVNIKNCLFENTDRG 355
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK----FNPNAL------P 245
+ +KT GRGG I I ++ M+ I D K +N + L P
Sbjct: 356 LRIKTRRGRGGIIDGIHAENIVMDKVLTPFVINEFYYCDSDGKTEYVWNKDKLEITEETP 415
Query: 246 VVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINLQGVAGP 290
V+ IT K++ + +G + GL + L N+ + P
Sbjct: 416 VIKNITFKNMVCKNSEVCAGFMYGLPERKIERVVLENLTIDFAEDP 461
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 112/240 (46%), Gaps = 21/240 (8%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPNL+ N + I++S FQNS W +HP + I+ +T+ P + N DG+D D
Sbjct: 196 YLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDID 255
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S V +E+S GDD + +KSG +E G G PS I IR T GI VGSE S
Sbjct: 256 SCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCTVYHGHGGIVVGSEMS 315
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV----- 231
GG+++V +GI K+ GRGG + NI + + M + I GD
Sbjct: 316 GGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRD------IDGDAISFNL 369
Query: 232 --------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
G++ ++ P PV I I+D+ + + LI GL P + +
Sbjct: 370 YYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTVKR 429
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 335 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 392
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 393 ACTDVLCEDCTFNTGDDCIAIKSGKDRDVEYGPAKRH-----LIRNCTMNSGHGGITLGS 447
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 448 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 504
Query: 227 IAG 229
+ G
Sbjct: 505 LKG 507
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 112/236 (47%), Gaps = 21/236 (8%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPNL+ N + I+++ FQNS W +HP + I+ +T+ P + N DG+D D
Sbjct: 195 YLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDID 254
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S V +E+S GDD + +KSG +E G G PS I+IR T GI VGSE S
Sbjct: 255 SCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGGIVVGSEMS 314
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV----- 231
GG+++V N +GI K+ GRGG + NI + + M +I GD
Sbjct: 315 GGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMR------EIDGDAISFNL 368
Query: 232 --------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 277
G++ + P PV I I+D+ + + LI GL P +
Sbjct: 369 YYEGKAGSGEYQAEAMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENV 424
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 124/252 (49%), Gaps = 21/252 (8%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--NTDGIDPD 116
RP +++F R++++S++ + P W +HPV SNV +R VT+ DS NTDG DP+
Sbjct: 223 RPKMVQFYRCRNVLVSDLTIVDPPMWTVHPVLSSNVTVRGVTV----DSTLYNTDGCDPE 278
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S+V I +T DD VAVKSG DE G G PS I +R S + G+ VGSE S
Sbjct: 279 CCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSGRWGGMTVGSEMS 338
Query: 177 GGVENVLAEHINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 228
GGV ++ AE+ + Y V ++VK N RGGFI + + + ++ + I
Sbjct: 339 GGVRDIFAENCEINPPDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVERDIAFV 398
Query: 229 GDVGDHPDDKFNPNALPV-VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
+ +D LPV V I + + Q + GL G+ LS G+
Sbjct: 399 TMAYNGGED----GTLPVSVRNIHMDRMAIDGAQTVLRLVGLDTDHLRGVRLSRSTFTGI 454
Query: 288 AGPTSPPLKCSD 299
P S + C+D
Sbjct: 455 LNPDS--IACTD 464
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 25/279 (8%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN ++ F RP +I +N +++ ++ VIFQNSP WNIHP+ C NV+I V + P+
Sbjct: 218 WNEIKR----FLRPVMISLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSY 273
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
+ N DG+D +S N I +S GDD + +KSG D G G P + + T
Sbjct: 274 AQNGDGLDLESCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCTVFKGH 333
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI- 225
G VGSE SGGV+N+ VG+ K+ GRGG + NI + ++ M + + +
Sbjct: 334 GGFVVGSEMSGGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDVI 393
Query: 226 --------KIAGDVGDHPDD-------KFNPN-ALPVVNGITIKDVWGTKVQQSGLIQGL 269
K A +V + D+ KF + P I I V +++ GL
Sbjct: 394 TFDLYYGGKSAVEVLNDGDEAKSQKVQKFKVDETTPCFRNIDINHVICRTARRAAYFNGL 453
Query: 270 KNSPFTGICLSNINL----QGVAGPTSPPLKCSDVSGSA 304
P + I + ++ + QG+ + +K ++ SA
Sbjct: 454 PEMPVSNIHIKDMEVNNAQQGIVINRTDGVKLENIKVSA 492
>gi|323529874|ref|YP_004232026.1| glycoside hydrolase family 28 [Burkholderia sp. CCGE1001]
gi|323386876|gb|ADX58966.1| glycoside hydrolase family 28 [Burkholderia sp. CCGE1001]
Length = 667
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N N+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 335 YLRPCMVEFIGCTNVLMENYCTNNTPFWQHHPTDCKNVVIRGVTT--NSIGPNNDGFDPD 392
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ NV + +TGDD +A+KSG D +YG A H I+ T +S GI +GS
Sbjct: 393 ACDNVLCDGVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCTMNSGHGGITLGS 447
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGV+N+ A ++ + N + + I +KTN+ RGGF++N V V + N G+
Sbjct: 448 EMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGFVKNFYVDKVTLPN---GVA 504
Query: 227 IAG 229
+ G
Sbjct: 505 LKG 507
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 31/264 (11%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP+ ++F R ++I ++ ++SPFW IHP+ C +VVIR V + A N DG+DP+ S
Sbjct: 209 RPHFVQFNRCRHVLIEDISIEDSPFWTIHPLLCRDVVIRRVKVRAHGH--NNDGVDPEMS 266
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IED GDD V+VKSG D P+ + +R + +AVGSE SGG
Sbjct: 267 QNVLIEDCVFDQGDDAVSVKSGRDMDAWRLNTPTKNVVMRNCRIKNGHQLMAVGSELSGG 326
Query: 179 VENVLAEHINLYNVGVG-----------IHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
+EN+ ++ + G G ++VKTN RGG+++NI + +V KI
Sbjct: 327 IENIFVDNCHFVGDGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNV------SATKI 380
Query: 228 AGDVGDHPDDKFNP---------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 278
G + D L + G+ + DV + + LI+ + P +
Sbjct: 381 QGSLLAVETDVLYQWRTLLPTYVRKLTPIEGLYLSDVRVEEAKHLCLIKAETDMPVKTVS 440
Query: 279 LSNINLQGVAGPTSPPLKCSDVSG 302
L + + T +K +V G
Sbjct: 441 LRRLRANTL---TDTAIKTQNVQG 461
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 445
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + + VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAVRVKTNMNRGGYVKDFHVKGVTLPN---GVT 502
Query: 227 IAG 229
+ G
Sbjct: 503 LKG 505
>gi|407710705|ref|YP_006794569.1| glycoside hydrolase family protein [Burkholderia phenoliruptrix
BR3459a]
gi|407239388|gb|AFT89586.1| glycoside hydrolase family 28 [Burkholderia phenoliruptrix BR3459a]
Length = 637
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N N+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 305 YLRPCMVEFIGCTNVLMENYCTNNTPFWQHHPTDCKNVVIRGVTT--NSIGPNNDGFDPD 362
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ NV + +TGDD +A+KSG D +YG A H I+ T +S GI +GS
Sbjct: 363 ACDNVLCDGVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCTMNSGHGGITLGS 417
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGV+N+ A ++ + N + + I +KTN+ RGGF++N V V + N G+
Sbjct: 418 EMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGFVKNFYVDKVTLPN---GVA 474
Query: 227 IAG 229
+ G
Sbjct: 475 LKG 477
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 123/264 (46%), Gaps = 15/264 (5%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +DG G WW+ ++ RP + ++ R I + +N+ W IHP C +
Sbjct: 203 RGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCED 262
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--P 151
++ +TI AP DSPNTDG +P+S NV I S GDD +AVK+G H
Sbjct: 263 LIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRSPDGEDDHLAE 322
Query: 152 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
+ GI +R G+ +GSE SGGV +V E ++ G+ +KT GRGG + NI
Sbjct: 323 TRGIRVRHCLMERGHGGLVIGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNI 382
Query: 212 TVSDVYMENARKGIKIAGDV---GDHPDDKFNP-------NALPVVNGITIKDVWGTKV- 260
+ V ++ + + D D++ P ++GI ++DV +
Sbjct: 383 AMRRVLLDGVQTALSANAHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLA 442
Query: 261 QQSGLIQGLKNSPFTGICLSNINL 284
+G+ GL +P + + N+ +
Sbjct: 443 HAAGVFLGLPEAPIRNVAIRNLTI 466
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Query: 37 GTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
GTI+G + WW + F RP L + +++ + V F+NSP W +HP + N+
Sbjct: 199 GTINGNASKENWWKNPKVMVGAF-RPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFSDNL 257
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
+TI P+DSPNTDG+DP+S NV I S GDD +AVKSG G Y PS
Sbjct: 258 KFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSEN 317
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
I IR+ + + VGSE +GGV+N++ E Y+ G+ +KT GRG
Sbjct: 318 IHIRQCLMENGHGAVTVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRG 368
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 36 NGTIDGQ-GAIWWNMWRQRTLPFT--RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
GTIDG G N W + + T RP +I R + + + +NSP WNIHP +
Sbjct: 197 QGTIDGNAGDSEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHPYFSD 256
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
++ + +L P DSPNTDG+DP+S +V I Y S GDD +AVKSG G Y PS
Sbjct: 257 HLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIYMGSTYKRPS 316
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I+IRR + +GSE +GGV+N+ + + G+ +KT GRG ++
Sbjct: 317 KDISIRRCCMRDGHGSVTIGSEMAGGVKNLTVKDCMFLHTDRGLRIKTRRGRG---KDAV 373
Query: 213 VSDVYMENAR 222
V + E+ R
Sbjct: 374 VDGIVFEHIR 383
>gi|170695826|ref|ZP_02886967.1| glycoside hydrolase family 28 [Burkholderia graminis C4D1M]
gi|170139250|gb|EDT07437.1| glycoside hydrolase family 28 [Burkholderia graminis C4D1M]
Length = 667
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N N+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 335 YLRPCMVEFIGCTNVLMENYATNNTPFWQHHPTDCKNVVIRGVTTN--SIGPNNDGFDPD 392
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ NV + +TGDD +A+KSG D +YG A H I+ T +S GI +GS
Sbjct: 393 ACDNVLCDGVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCTMNSGHGGITLGS 447
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGV+N+ A ++ + N + + I +KTN+ RGGF++N V V + N G+
Sbjct: 448 EMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGFVKNFYVDKVTLPN---GVA 504
Query: 227 IAG 229
+ G
Sbjct: 505 LKG 507
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 30 ISFIGENGTIDGQGAI--WWNM-------W-----------RQRTLPFT----------- 58
I+ G+ G IDGQG+ WW M W R+R + +
Sbjct: 148 IALTGK-GVIDGQGSNENWWYMCGAPRYGWKEGMRSQKLGSRERLMGYAELKRPIYERVM 206
Query: 59 ------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 112
RP LI F + +++I +V NSPFW IHP++C ++++R V I PN DG
Sbjct: 207 TPEDGLRPQLINFYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFNRG--PNGDG 264
Query: 113 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 172
DP+S NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +G
Sbjct: 265 CDPESCKNVLIENCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGHGGVVIG 324
Query: 173 SETSGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 230
SE SGG N+ E ++ + I +KT+ RGG I N+ V ++ + + + + +
Sbjct: 325 SEISGGYRNLYVEDCVMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKVGQCNEAV-LRIN 383
Query: 231 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ ++ N P V + +K+V K + + GL + +SN++L+
Sbjct: 384 LKYEEREQCNRGFDPTVRNVHLKNVTCEKSRYGIVAIGLDDDKH----VSNVSLE 434
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Query: 37 GTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
GTI+G + WW + F RP L + +++ + V F+NSP W +HP + N+
Sbjct: 199 GTINGNASKENWWKNPKVMVGAF-RPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFSDNL 257
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
+TI P+DSPNTDG+DP+S NV I S GDD +AVKSG G Y PS
Sbjct: 258 KFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSEN 317
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
I IR+ + + VGSE +GGV+N++ E Y+ G+ +KT GRG
Sbjct: 318 IHIRQCLMENGHGAVTVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRG 368
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 146/312 (46%), Gaps = 45/312 (14%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMW---------RQRTL 55
+++ W F + + ++ G+ GTIDG G++ +N W R R +
Sbjct: 126 MVLTKWEGTECFNYSPFIYAYQCTNVAVTGK-GTIDGNGSVTFNDWHAIQGPAVDRLRQM 184
Query: 56 ---------------PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 100
+ RP +I+F +++++ ++ +SPFW IHPV+C NV +R V
Sbjct: 185 GIDSVPVYERVFGEGHYLRPCMIQFYGCKNVLVEDLKIYDSPFWIIHPVFCDNVTVRNVY 244
Query: 101 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 160
I +++ N DG DP+SS+NV IE + GDD +A+KSG D+ G G + + IR
Sbjct: 245 I--DSNNYNNDGCDPESSTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNC 302
Query: 161 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+ I +GSE SGGV N+ E + + GI+ K+N+ RGG+ N+ + + +
Sbjct: 303 HFAR--WAITIGSEMSGGVRNIYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADV 360
Query: 221 ARKGI------KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSP 273
G+ G+HP + I I+DV +V L+ GL +
Sbjct: 361 CLWGVINFRTNYHGYRGGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAK 411
Query: 274 FTGICLSNINLQ 285
I L NI ++
Sbjct: 412 LYDITLRNITVK 423
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 18/286 (6%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRT--LPFTRPNLIEFMNSRSIIISNVIFQNSP 82
S +++ GE G +DGQG WW + ++ L + RP L +S ++I NV F NSP
Sbjct: 98 SHLKRVKITGE-GVVDGQGKKWWRRFDEKAAELEYPRPYLCSIEHSEQVVIENVTFVNSP 156
Query: 83 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 142
W +HP C NV I VT++ P +SPNTDG+DP+S N+ I + GDD +A+KSG +
Sbjct: 157 AWTLHPFDCENVAINNVTVVNPKNSPNTDGLDPESCRNIRIANCCFDVGDDCIAIKSGTE 216
Query: 143 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 202
+ + I I G+ GSE SG + NV + + GI KT
Sbjct: 217 DASQSIA--CENIIISGCNMVHGHGGVVFGSEMSGDIRNVTISNCVFQDTDRGIRFKTRR 274
Query: 203 GRGGFIRNITVSDVYMENARKGIKIAGD--VGDHPDDKF--NPNALPV------VNGITI 252
GRGG I I+V+++ M+N + I G ++ + ALPV ++ ++
Sbjct: 275 GRGGRISGISVNNIVMDNVLCPLIINSYYFCGKRGNEAYVWTKEALPVDERTPKLSNLSF 334
Query: 253 KDVWGTKVQQ-SGLIQGLKNSPFTGICLSN--INLQGVAGPTSPPL 295
+ T ++ +G I GL + + LS+ L + P +P +
Sbjct: 335 SHLIATNIRSCAGFIYGLPEMAISNVTLSDARFELSKDSQPEAPAM 380
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 15/264 (5%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +DG G WW+ ++ RP + ++ R++ + +N+P W +HP C
Sbjct: 208 TGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCET 267
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--P 151
+ +TI AP +SPNTDG +P+S NV I S GDD +AVK+G H
Sbjct: 268 LKAAGLTISAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAE 327
Query: 152 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
+ G+++R G+ +GSE SGGV +V E ++ G+ +KT GRGG + NI
Sbjct: 328 TRGVSVRHCLMERGHGGLVIGSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNI 387
Query: 212 TVSDVYMENARKGIKIAG----DVGDHP------DDKFNPNALPVVNGITIKDVWGTKV- 260
T+ V ++ + D H D + P ++GIT++DV +
Sbjct: 388 TMRRVLLDGVHTALSANAHYHCDADGHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLA 447
Query: 261 QQSGLIQGLKNSPFTGICLSNINL 284
+G+ GL +P I + N+ +
Sbjct: 448 HAAGVFLGLPEAPIRNIAIRNLTI 471
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 15/264 (5%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +DG G WW+ ++ RP + ++ R++ + +N+P W +HP C
Sbjct: 200 TGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCET 259
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--P 151
+ +TI AP +SPNTDG +P+S NV I S GDD +AVK+G H
Sbjct: 260 LKAAGLTISAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAE 319
Query: 152 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
+ G+++R G+ +GSE SGGV NV E ++ G+ +KT GRGG + N+
Sbjct: 320 TRGVSVRHCLMERGHGGLVIGSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNV 379
Query: 212 TVSDVYMENARKGIKIAG----DVGDHPD--DKFNPNAL----PVVNGITIKDVWGTKV- 260
T+ V ++ + + D H +P + P ++GIT++DV +
Sbjct: 380 TMRRVLLDGVQTALSANAHYHCDADGHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLA 439
Query: 261 QQSGLIQGLKNSPFTGICLSNINL 284
+G+ GL +P I + N+ +
Sbjct: 440 HAAGVFLGLPEAPIRNIAIRNLTI 463
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 7/236 (2%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN I+ + +++ +NSP W ++PV C ++ + VT+ + N DG DP+
Sbjct: 188 YLRPNFIQTIRCSRVLLQGFTLKNSPMWQLNPVMCRSLTVDGVTLYS--HGANNDGCDPE 245
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S + V I + TGDD +++KSG D G G P + I + GIA+GSE S
Sbjct: 246 SCNGVHIRNCRFDTGDDCISLKSGRDRDGRMAGIPCENVLIENNEFADGHGGIALGSEMS 305
Query: 177 GGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GG+ VLA + N+ + +KTN RGG + ++ ++D M++ G + G +
Sbjct: 306 GGIRRVLAVNNRFSSPNLTYALRLKTNARRGGRVEDVILADSVMDHV-HGAAVHGTM--L 362
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
+D N + LP + ITI+++ ++ P TG+ L NI + GVA P
Sbjct: 363 YEDGRNGSDLPEFHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRIDGVARP 418
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 19/242 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP+ I+F NS++I+I + ++SP W I PV C N+ I V I+ PNTDG +PD
Sbjct: 199 YLRPSFIQFYNSKNILIEGITVKDSPMWQISPVLCENITIDKVKIVGHG--PNTDGFNPD 256
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N+ I++ Y + GDD +A+KSG + G P I I+ GI +GSE S
Sbjct: 257 SCKNILIKNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQNNYMKDGHGGITIGSEIS 316
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA------ 228
G V NV A+H ++ N+ + KTN RGG I NI + +++ + I I
Sbjct: 317 GSVRNVFADHNVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFIVDMDYEE 376
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
GD G++ P+V I ++++ + L+ +P + + +N L V
Sbjct: 377 GDAGEY---------TPIVRNIFVENLESYGGKTGILMSAYDRTPISNVQFTNCILHNVE 427
Query: 289 GP 290
P
Sbjct: 428 TP 429
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 123/264 (46%), Gaps = 15/264 (5%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +DG G WW+ ++ RP + ++ R I + +N+ W IHP C +
Sbjct: 201 RGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCED 260
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--P 151
++ +TI AP DSPNTDG +P+S NV I S GDD +AVK+G H
Sbjct: 261 LIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE 320
Query: 152 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
+ GI +R G+ +GSE SGGV +V E ++ G+ +KT GRGG + NI
Sbjct: 321 TRGIRVRHCLMERGHGGLVIGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNI 380
Query: 212 TVSDVYMENARKGIKIAGDV---GDHPDDKFNP-------NALPVVNGITIKDVWGTKV- 260
+ V ++ + + D D++ P ++GI ++DV +
Sbjct: 381 AMRRVLLDGVQTALSANAHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLA 440
Query: 261 QQSGLIQGLKNSPFTGICLSNINL 284
+G+ GL +P + + N+ +
Sbjct: 441 HAAGVFLGLPEAPIRNVAIRNLTI 464
>gi|420246887|ref|ZP_14750314.1| endopolygalacturonase [Burkholderia sp. BT03]
gi|398073036|gb|EJL64222.1| endopolygalacturonase [Burkholderia sp. BT03]
Length = 674
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ N N+PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 342 YLRPCMVEFLGCTNVLMENYRTNNTPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 397
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ +NV + +TGDD +A+KSG YG P+ I+ T +S GI +GSE
Sbjct: 398 PDACNNVLCDGVTFNTGDDCIAIKSG-KALDTTYG-PAQNHVIQNCTMNSGHGGITLGSE 455
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+N+ A ++ + N + + I +KTN+ RGG+++N V +V + N G+ +
Sbjct: 456 MGGGVQNIYARNLQMLNQNWQTNPLNIAIRIKTNMNRGGYVKNFYVDNVTLPN---GVNL 512
Query: 228 AG 229
G
Sbjct: 513 TG 514
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 150/310 (48%), Gaps = 40/310 (12%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQR----------- 53
+++ W I+ + I+ GE GTIDG+G W ++ +
Sbjct: 119 MVLTSWEGTMIYNYSPLIYAYDCTNIAISGE-GTIDGEGGKTWKSFKDKEGKGKELSREM 177
Query: 54 ---TLP----------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 100
++P F RP +I+F ++I++ N+ +NSPFW +H + ++ +R ++
Sbjct: 178 NHNSIPINERKFGTGYFLRPQMIQFFKCKNILVENIRIENSPFWCLHLLKSESITVRGIS 237
Query: 101 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA-YGHPSSGITIRR 159
+ + N DGIDP+ + +V IE+ + GDD +A+K+G D G A PS I IR
Sbjct: 238 Y--KSLNYNNDGIDPEYAKDVLIENVTFNNGDDNIAIKAGRDHEGRANSATPSENIIIRN 295
Query: 160 VTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV---GIHVKTNIGRGGFIRNITVSDV 216
G+ +GSE S GV+NV E N VG GI++KTN RGGFI+N+ V ++
Sbjct: 296 CNFKG-LHGVVIGSEMSAGVQNVYVE--NCKTVGYLKRGIYLKTNADRGGFIKNVFVRNI 352
Query: 217 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFT 275
++ + I + H + K ++ ++ D+ K +G+ IQG +
Sbjct: 353 QLDEVEDCLYITANY--HGEGK---GFQSEISNVSFSDISCNKASATGIVIQGFPDKKIK 407
Query: 276 GICLSNINLQ 285
I L+NI ++
Sbjct: 408 NISLNNIEIK 417
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 144/312 (46%), Gaps = 45/312 (14%)
Query: 5 LMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWR------------- 51
+++ W F + + ++ G+ GTIDG G++ +N W
Sbjct: 126 MVLTKWEGTECFNYSPFIYAYQCTNVAVTGK-GTIDGNGSVTFNGWHAIQGPAVDRLRQM 184
Query: 52 --------QRTL---PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVT 100
QR + RP +I+F +++++ ++ +SPFW IHPV+C NV +R V
Sbjct: 185 GIDSVPVYQRVFGEGHYLRPCMIQFYGCKNVLVEDLKIYDSPFWIIHPVFCDNVTVRNVY 244
Query: 101 ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV 160
I +++ N DG DP+S +NV IE + GDD +A+KSG D+ G G + + IR
Sbjct: 245 I--DSNNYNNDGCDPESCTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNC 302
Query: 161 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+ I VGSE SGGV N+ E + + GI+ K+N RGG+ N+ + + +
Sbjct: 303 HFAR--WAITVGSEMSGGVRNIYIEDCKIDSCRNGIYFKSNPDRGGYFENLNMRRIEADV 360
Query: 221 ARKGI------KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSP 273
G+ G+HP + I I+DV +V L+ GL +
Sbjct: 361 CLWGVINFRTNYHGYRGGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAK 411
Query: 274 FTGICLSNINLQ 285
I L NIN++
Sbjct: 412 LHNITLRNINVK 423
>gi|254254779|ref|ZP_04948096.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
gi|124899424|gb|EAY71267.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
Length = 668
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++++ QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 336 YLRPCMVEFIGCTNVLMADYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 393
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V E+ +TGDD +A+KSG + EYG A H IR T +S GI +GS
Sbjct: 394 ACTDVLCEECTFNTGDDCIAIKSGKNLDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 448
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 449 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVN 505
Query: 227 IAG 229
+ G
Sbjct: 506 LKG 508
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 131/272 (48%), Gaps = 17/272 (6%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E + GE GTIDG WW + R + + RP L + R++ + + QNSP W
Sbjct: 194 ENVVITGE-GTIDGNAGFDNWWYNVKVRNIAW-RPRLFFINHCRNVTMHGITVQNSPSWT 251
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
+HP + ++ V I PA+S NTDG+DP+S ++V + +YIS GDD +A+KSG G
Sbjct: 252 LHPYFSDHLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIAIKSGKIYMG 311
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
+ P+S + +R+ + VGSE + GV++V N G+ VKT GRG
Sbjct: 312 RKHKIPTSDMEVRQCCMRDGHGAVTVGSEIAAGVKDVHIRDCIFMNTDRGLRVKTRRGRG 371
Query: 206 --GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN----PNALPV------VNGITIK 253
+ +I+ ++ M+N + PD K ALPV + +T K
Sbjct: 372 RDSVLDDISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATSKALPVDDRTPAIKRLTFK 431
Query: 254 DVWGTKVQQSG-LIQGLKNSPFTGICLSNINL 284
D+ T +G I GL S + N+++
Sbjct: 432 DIKATNCHVAGAYICGLPESKIERLTFENVDI 463
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E + GE G +DG ++ WW +++ + + RPN + N ++I + + NSP W
Sbjct: 191 ENVHIYGE-GILDGNASMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWT 248
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
+HP Y N++ TI+ P +SPNTDG+DP+S NV I + IS GDD VA+KSG
Sbjct: 249 VHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMA 308
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
+ + P+ I IR + +GSE + GV +V E G+ +KT GRG
Sbjct: 309 LKHYKPAKNIVIRNSIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRG 368
Query: 206 --GFIRNITVSDVYMENA----RKGIKIAGDVGDHPD-----DKFNPN-ALPVVNGITIK 253
+ NI ++ M++ + D H D DK N P + I +
Sbjct: 369 EKSVLDNICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAAR 428
Query: 254 DVWGTKVQQ-SGLIQGLKNSPFTGICLSNINLQ 285
D+ V+ + GL P I L NI L
Sbjct: 429 DIRCENVKNIFACLYGLPEMPVEEIVLENITLN 461
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 100/171 (58%), Gaps = 10/171 (5%)
Query: 12 SNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSI 71
+A++R S F E + F GE G I+G+G WW Q L F RP L + + ++
Sbjct: 38 KDALYR--SVFYGEYVENVVFTGE-GLINGEGENWWTRNSQ-NLKFERPRLFQCLFCKNF 93
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
I + ++NSPFW IH VY N+ I V ILA +S NTDGID DSSSNV I D +I G
Sbjct: 94 KIEKLTWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDGIDIDSSSNVHIHDVFIDVG 153
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF--SGIAVGSETSGGVE 180
DD++A+KSG+D G +G P+ + + +S F A+GSE SGGV+
Sbjct: 154 DDVIALKSGFDFCGREFGMPTKNVLVE----NSVFINENFAIGSEMSGGVQ 200
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 138/304 (45%), Gaps = 51/304 (16%)
Query: 28 EKISFIGENGTIDGQG--AIWW----------NMWRQRTLPFT----------------- 58
E I+ G GT+DG+G WW + R R L F
Sbjct: 151 ENIAITGA-GTLDGRGDEHHWWPWKYGTNGQPSQERDRQLLFDMAEKRRPVEERVFGEGH 209
Query: 59 --RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
R + I+ + ++I V ++SP W IHPV +V++R V I+ PNTDG++P+
Sbjct: 210 YLRSSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSEHVIVRGVHIIG--HGPNTDGVNPE 267
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IED Y GDD +A+KSG +E G G PS I IRR G+ +GSE S
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHGGVTIGSEIS 327
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------A 228
GGV V AE+ ++ N+ + +KTN RGG I +I + +++ + +
Sbjct: 328 GGVRYVYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEE 387
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
GD G H PVV I ++ + + + I +SP T + N + V
Sbjct: 388 GDAGPH---------RPVVRHIEVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVT 438
Query: 289 GPTS 292
P S
Sbjct: 439 YPLS 442
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ F+ +++++ V+F+NSP WNIHP+ C NV++ V + P + N DG+D +
Sbjct: 226 FLRPVMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNGDGLDLE 285
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N I +S GDD + +KSG DE G P+ + I G VGSE S
Sbjct: 286 SCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCKVFQGHGGFVVGSEMS 345
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G V N+L + VG+ K+ GRGG + NI + D+ M
Sbjct: 346 GSVRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDINM 387
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 6/189 (3%)
Query: 36 NGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GT+DG WW R + + F RP ++ + +++ V QNSP WN+HP + +
Sbjct: 197 EGTLDGCATFDDWWEDDRAKIIAF-RPRMVFLNHCDHVVLHGVTIQNSPSWNLHPYFSDD 255
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
+ +TIL P DSPNTDG+DP+S + + I Y S GDD +A+KSG G Y PS
Sbjct: 256 LRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKYKVPSQ 315
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
I +R+ ++ + +GSE + GV++V + + G+ +KT GRG ++ V
Sbjct: 316 NIEVRQCCMNNGHGAVTIGSEMAAGVKHVHVKDCLFLHTDRGLRIKTRRGRG---KDAVV 372
Query: 214 SDVYMENAR 222
D+ EN R
Sbjct: 373 EDICFENIR 381
>gi|221210443|ref|ZP_03583423.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
gi|221169399|gb|EEE01866.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
Length = 665
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V ED +TGDD +A+KSG + E G A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTESGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE V A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQVYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 227 IAG 229
+ G
Sbjct: 503 LKG 505
>gi|390567093|ref|ZP_10247442.1| glycoside hydrolase family protein [Burkholderia terrae BS001]
gi|389940941|gb|EIN02721.1| glycoside hydrolase family protein [Burkholderia terrae BS001]
Length = 674
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ N N+PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 342 YLRPCMVEFLGCTNVLMENYRTNNTPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 397
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ +NV + +TGDD +A+KSG YG P+ I+ T +S GI +GSE
Sbjct: 398 PDACNNVLCDGVTFNTGDDCIAIKSG-KALDTTYG-PAQNHVIQNCTMNSGHGGITLGSE 455
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+N+ A ++ + N + + I +KTN+ RGG+++N V +V + N G+ +
Sbjct: 456 MGGGVQNIYARNLQMLNQNWQTNPLNIAIRIKTNMNRGGYVKNFYVDNVTLPN---GVNL 512
Query: 228 AG 229
G
Sbjct: 513 TG 514
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 133/298 (44%), Gaps = 46/298 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNS 68
E +S G GTIDGQG IWW + R L + RP I S
Sbjct: 98 ENVSITG-TGTIDGQGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFES 156
Query: 69 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 128
++I++ + + S FWNIH Y + + V I A P+TDGID DS V IE +
Sbjct: 157 QNILLRDFTSRESGFWNIHLCYSRRIAVEAVQISNSA-GPSTDGIDVDSCEQVRIERCIV 215
Query: 129 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 188
S DD + +KSG + I IR T + SGI +GSETSGG+E VL E
Sbjct: 216 SCNDDNICIKSGRGREAAQKARTARDIVIRGCT-LNKGSGITLGSETSGGIERVLIEDNA 274
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD------VGDHPDDKFNPN 242
GVG +K+ RGGFIR+ITV ++ + + R + I + GD + P
Sbjct: 275 FNGTGVGFRIKSARNRGGFIRDITVQNLRLTDVRFPVLIQLNWFPQYSYGDQSNLSDKPE 334
Query: 243 -------------ALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNI 282
L V+G+TIK++ + ++ I+G P G+ L I
Sbjct: 335 HWRKLAEGVEGEAGLTEVSGLTIKNMTARRSDKKYFSRAFFIEGYPERPVAGLTLEGI 392
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 35/283 (12%)
Query: 37 GTIDGQGAIWWNMWRQR--------------TLP----------FTRPNLIEFMNSRSII 72
G IDG+G W ++ + +P F RP +I+F+N ++I+
Sbjct: 147 GIIDGEGGKIWKSFKAKEGAGKNLSREMNHNNVPVSDRKFGEGYFLRPQMIQFLNCKNIL 206
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ NV +NSPFW +H + N+ +R ++ + + N DGIDP+ + +V IE+ GD
Sbjct: 207 VENVRIENSPFWCLHLLKSQNITVRGISY--KSLNYNNDGIDPEYAKDVLIENVTFDNGD 264
Query: 133 DLVAVKSGWDEYGIA-YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN 191
D VA+K+G D G A PS I IR G+ +GSE S GV+NV E+
Sbjct: 265 DNVAIKAGRDHEGRANTASPSENIVIRNCNFKG-LHGVVIGSEMSAGVQNVFVENCKTAG 323
Query: 192 -VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGI 250
+ GI++KTN RGG+I+N+ V ++ ++ + I + + + ++ I
Sbjct: 324 YLKRGIYLKTNADRGGYIKNVFVQNLQLDEVEDCLYITANYHGEGEGYQSD-----ISNI 378
Query: 251 TIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTS 292
++ + +SG+ IQG + I L+NI+++ S
Sbjct: 379 HFSNITCNRASESGIVIQGFSDKKIRSISLNNIDIKEAKNALS 421
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 24/308 (7%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +DG G WW ++ RP + ++ R + +N+ W IHP C +
Sbjct: 201 RGILDGSGDKGDWWRWPKETRDGARRPRGLHLVSCRKTNLLGFTIRNAASWTIHPQGCED 260
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--P 151
++ ++I AP DSPNTDG +P+S NV I S GDD +AVK+G H
Sbjct: 261 LIAAGLSIAAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE 320
Query: 152 SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
+ G+ + G+ +GSE SGGV +V E ++ G+ +KT GRGG + NI
Sbjct: 321 TRGVRVGHCLMERGHGGLVIGSEMSGGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNI 380
Query: 212 TVSDVYMENARKGIKIAG----DVGDHPD--DKFNP----NALPVVNGITIKDVWGTKVQ 261
+ V ++ + + D H D NP + P ++GIT++DV +
Sbjct: 381 AMRRVLLDGVKTALSANAHYHCDADGHDDWVQSRNPAPVDSGTPFIDGITVEDVEIRNLS 440
Query: 262 Q-SGLIQGLKNSPFTGICLSNINL--QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 318
+G GL +P + + N+ + + ++ +PP+ A +V+P +
Sbjct: 441 HAAGAFLGLAEAPIRNVTIRNVTIVSRDLSAIATPPIM-------ADRVRPMRHEAIVFE 493
Query: 319 QQTGACSN 326
Q C N
Sbjct: 494 QAHIVCDN 501
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 137/300 (45%), Gaps = 19/300 (6%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMN 67
W N + F S + + IG G ++GQ + WW + + + + RP I F+N
Sbjct: 170 WEGNPLDSFTSLITGINVKNVRIIGR-GCLNGQASKENWWKNPKVKNIAW-RPRSI-FLN 226
Query: 68 S-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDS 126
S +++I + NSP W IHP +N+ + I PADSPNTDGIDP+S NV
Sbjct: 227 SCENVVIEGIKIMNSPSWTIHPFLTNNLRFINLKIENPADSPNTDGIDPESCENVEYIGI 286
Query: 127 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 186
S GDD +A+KSG G PS I+ + G+ +GSE SGGVEN+ E
Sbjct: 287 DFSVGDDCIAIKSGKLYLGKVLNKPSKNFIIKNCSMKYGHGGVVIGSEMSGGVENINIEK 346
Query: 187 INLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPDDK----FN 240
+ Y GI +KT GRG G I I V ++ M+ + PD K +
Sbjct: 347 CDFYKTDKGIRIKTRRGRGENGVIDGIYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYT 406
Query: 241 PNALPV------VNGITIKDVWGTK-VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 293
LPV + I+ +++ + +G + GL P + N+ + G +P
Sbjct: 407 KEKLPVDERTPSIKNISFENIKAEDTLVCAGFLYGLPEKPIENVKFKNVEVDFKDGEVTP 466
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 12/237 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN IEF ++++ ++ NSPFW +HP+ +N++I VT+ + PN DG DP+
Sbjct: 220 YLRPNFIEFFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTV--NSHGPNNDGCDPE 277
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N+ I++ +TGDD +A+K+G D G PS I ++ G+ +GSE S
Sbjct: 278 YSQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMIDGHGGVVIGSEIS 337
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GV NV E+ ++ N+ I +KTN RGG I N+ V ++ + ++ + + ++ +
Sbjct: 338 AGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECV-LKLNMFYN 396
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLI----QGLKNSPFTGICLSNINLQGV 287
N +PV+ I +++V V+ G +G K SP I L N+ +Q V
Sbjct: 397 VYGSQTGNFIPVIRNINLENV---NVKNGGKYSIWAEGYKESPVENITLKNVKIQKV 450
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 21/284 (7%)
Query: 35 ENGTIDGQGAI--------WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
+N TI GQG + WW ++ RP + R + I+ + +NSP W +
Sbjct: 188 DNLTICGQGIVDGGGDRGDWWTWPKETRDGARRPRTMFLSGCRHLTIAGITVRNSPSWTV 247
Query: 87 HPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGI 146
HPV C +V+ +TI DSPNTDG++P+SS N+ + IS GDD VA+K+G +
Sbjct: 248 HPVLCEDVLAVGLTIRNHPDSPNTDGLNPESSQNIRLVGLDISVGDDCVAIKAGKRDPRG 307
Query: 147 AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
P+ + IR + +GSE S G+ +V + + G+ +KT GRGG
Sbjct: 308 GPDRPTRNVEIRNCLMQRGHGAVVMGSEMSQGISDVSISRCHFFGTDRGLRIKTRRGRGG 367
Query: 207 FIRNITVSDVYMENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGITIKDVW 256
+ I+V D ME+ I + D D + ALPV + GI I+++
Sbjct: 368 TVSKISVHDCRMEDVATPIAVNAFYFCDADGRSDYVQSRTALPVSLTTPKIEGIDIRNLE 427
Query: 257 GTKVQQSGLI-QGLKNSPFTGICLSNINL--QGVAGPTSPPLKC 297
+ + + + GL S + + +++ A P P + C
Sbjct: 428 VSGAETAAAVFYGLPESTIDAVSIDGMSIAYSADAKPAVPEMAC 471
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 23/292 (7%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +DG G WW ++ R + ++ + + +N+P W IHP C
Sbjct: 203 KGILDGAGNAGDWWGWAKETRDGARRARGLHLIDCSDVTLFGFTIRNAPSWIIHPQGCHR 262
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG----IAYG 149
+V ++I AP DSPNTDG +P+ SS + +E + GDD +A+K+G + G A+
Sbjct: 263 LVAACLSIEAPHDSPNTDGFNPEGSSEIRVEGVRFTVGDDCIAIKAG--KRGPCGEAAHL 320
Query: 150 HPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
+ + IR G+ +GSE SGGV +VL E + G+ +KT GRGG +
Sbjct: 321 RETRDVQIRHCLMERGHGGVVIGSEMSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVS 380
Query: 210 NITVSDVYMENARKGIKIAGDVGDHPD------DKFNPNAL----PVVNGITIKDVWGTK 259
IT+ V ME PD P AL P ++GI ++D+ +
Sbjct: 381 GITMRRVRMEGVLTAFSANAHYHCDPDGHDEWVQSRQPAALDEGTPEIDGIAVEDIDLHE 440
Query: 260 VQQS-GLIQGLKNSPFTGICLSNINLQGV---AGPTSPPLKCSDVSGSAYQV 307
V + G GL +P + + N+ + A P +PP+ V +++
Sbjct: 441 VGHAVGAFLGLPEAPIRNVSIRNLRVHSFDPEAAP-APPIMADGVQAMRHEM 491
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ +N + +++ FQNSP WNIHP+ C +V IR +T+ P S N DG+D +
Sbjct: 250 FMRPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWYSQNGDGLDLE 309
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N I ++ GDD + +KSG D++G G P+ + ++ G VGSE S
Sbjct: 310 SCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKNNVVYHGHGGFVVGSEMS 369
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKI-------- 227
GV+NV + +G+ K+ GRGG + NI +S++ M N + I
Sbjct: 370 SGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDMINIPTQAISFNLFYGGNS 429
Query: 228 ----AGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
A G ++K P P I +K++ ++ +QGL + + N
Sbjct: 430 PTMDAEQGGAKKEEKLMPVTEETPSFKDIYMKNIRVAGADEALALQGLPEMNLQNVNIEN 489
Query: 282 INLQGVAGPTS 292
L+ G T+
Sbjct: 490 AVLKAKKGITA 500
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 17/272 (6%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E + GE G +DG + WW +++ + + RPN + N ++I + + NSP W
Sbjct: 191 ENVLIFGE-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWT 248
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
+HP Y N++ TI+ P +SPNTDG+DP+S NV I + IS GDD VA+KSG
Sbjct: 249 VHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMA 308
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
+ + P+ I IR + +GSE + GV +V E G+ +KT GRG
Sbjct: 309 LKHYKPAKNIVIRNSIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRG 368
Query: 206 --GFIRNITVSDVYMENA----RKGIKIAGDVGDHPD-----DKFNPN-ALPVVNGITIK 253
+ NI ++ M++ + D H D DK N P + I +
Sbjct: 369 EKSVLDNICFENIIMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAAR 428
Query: 254 DVWGTKVQQ-SGLIQGLKNSPFTGICLSNINL 284
D+ V+ + GL P I L NI L
Sbjct: 429 DIRCENVKNIFACLYGLPEMPVEEIVLENITL 460
>gi|187919562|ref|YP_001888593.1| glycoside hydrolase [Burkholderia phytofirmans PsJN]
gi|187718000|gb|ACD19223.1| glycoside hydrolase family 28 [Burkholderia phytofirmans PsJN]
Length = 671
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N N+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 339 YLRPCMVEFIGCTNVLMENYTTNNTPFWQHHPTDCKNVVIRGVTT--NSIGPNNDGFDPD 396
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ +NV + +TGDD +A+KSG D +YG A H I+ +S GI +GS
Sbjct: 397 ACNNVLCDSVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCIMNSGHGGITLGS 451
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGV+N+ A ++ + N + + I +KTN+ RGGF++N V V + N G+
Sbjct: 452 EMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGFVKNFYVDKVTLPN---GVS 508
Query: 227 IAG 229
+ G
Sbjct: 509 LKG 511
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 133/289 (46%), Gaps = 45/289 (15%)
Query: 37 GTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNVI 77
GTIDGQG +WW + R L + RP I S I + +
Sbjct: 106 GTIDGQGLVWWQRFWGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFT 165
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+ S FWN+H Y ++ + V I A P+TDGID DS V +E +S DD + +
Sbjct: 166 SRESGFWNVHLCYSRHITLDSVQISNSA-GPSTDGIDIDSCEQVRVERCVVSCNDDNICI 224
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+G + + + I IR T +S SGI +GSETSGG+E VL EH GVG
Sbjct: 225 KAGRGQEAASKARSARDIVIRDCTPNSG-SGITLGSETSGGIERVLIEHNRFNGTGVGFR 283
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIA------------GDVGDHP-------DDK 238
+K+ RGGFIR+I V + + + R + I GD+ D P DD
Sbjct: 284 IKSARNRGGFIRDIKVRHLQLVDVRFPVMIQLNWFAQYSYGERGDLTDKPDHWRKLADDV 343
Query: 239 FNPNALPVVNGITIKDVWGTKVQQS-----GLIQGLKNSPFTGICLSNI 282
L V+ +T++++ + + S I+G + P + + L+++
Sbjct: 344 QGEAGLTHVSNLTLENISARRSESSVFSRAFFIEGYPDRPVSALTLASV 392
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 119/233 (51%), Gaps = 31/233 (13%)
Query: 16 FRFLSDFLISKFEKISFIGENGTIDGQGAIW--WNMWRQRT----LPFTR---------- 59
+ + S E ++ G+ G ++GQG W W + R +P +R
Sbjct: 153 YNYSSLIYAKNIENVAITGK-GILEGQGEHWLKWGTVQPRATATKVPLSRRKNFGKGAGK 211
Query: 60 ----PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ + F S++I I + + SP WNIH +Y S++V+R +TI + +S N DGI
Sbjct: 212 EGMRPSFVVFWKSKNIFIEGITLRESPMWNIHLIYSSHIVVRDITINS-VESHNGDGIVL 270
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV------TGSSPFSGI 169
DSSS+ +E +++STGDD + +KSG++E G+ P+ + IR TGS G+
Sbjct: 271 DSSSDALLEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIRNYYAYDVRTGS---GGV 327
Query: 170 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 222
GSETSGG+ N+ GI KT GRG NI +SDV M+N R
Sbjct: 328 VFGSETSGGIRNIYVHDALFEKCDRGIRFKTARGRGNITENIIISDVQMKNIR 380
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 119/233 (51%), Gaps = 6/233 (2%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP L+ F I++ + NSPFW IHP+ +N+ + VT+ D PN DG DP++
Sbjct: 211 RPQLVNFNACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTN--DGPNGDGCDPEAC 268
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
SNV I++ TGDD +A+KSG + G + PS I IR G+ +GSE SGG
Sbjct: 269 SNVLIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCKMKDGHGGVVIGSEISGG 328
Query: 179 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
NV AE H++ ++ + +KTN RGG I NI + +V + + + + ++ P
Sbjct: 329 CRNVFAEDCHMDSPHLDRVLRIKTNNCRGGVIENINMRNVTVGQCNEAV-LRINLDYEPR 387
Query: 237 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGVA 288
++ P V + +++V + + I GL N + + + N GV+
Sbjct: 388 EQCYRGFEPTVRRVYMENVTSRESKYGVQIIGLNNIENVSDVTVKNCRFDGVS 440
>gi|254392542|ref|ZP_05007720.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706207|gb|EDY52019.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 380
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 35/255 (13%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP +++F R ++IS++ + P W +HPV C+NV +R +T+ + NTDG+DP+
Sbjct: 122 YLRPKMVQFNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPE 179
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+S V I +T DD VAVK+G DE G G PS I ++ S + GI VGSE S
Sbjct: 180 ASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCDFSGRWGGITVGSEMS 239
Query: 177 GGVENVLAEHINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 227
GGV V AE + Y V +++K + RGGF+ + V + + +
Sbjct: 240 GGVRRVFAEDCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFV 299
Query: 228 -----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTGI 277
G+ G HP ++++D+ + + G + GL+ G+
Sbjct: 300 NMDYNGGEGGTHP--------------VSVRDIHLSHCRIDGARAVLRLVGLETDRLRGV 345
Query: 278 CLSNINLQGVAGPTS 292
L++ + GV GP +
Sbjct: 346 HLAHCDFTGVRGPDA 360
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 133/296 (44%), Gaps = 53/296 (17%)
Query: 37 GTIDGQGAIWWNMWR-----QRTLP----------------------------FTRPNLI 63
G +DG G+ WW+ +R RTLP F RP LI
Sbjct: 103 GVVDGSGSSWWDKFRNIEQEDRTLPREKYELDLAKLNPDYKTRTGGGGRPSTQFLRPPLI 162
Query: 64 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 123
+F I +S+ +NSPFW +H VY + + I +T PA++ NTD +D DSS +V +
Sbjct: 163 QFWKCHDIKLSDFTLENSPFWTLHMVYSNKISIDNMTFSNPAEAINTDAMDIDSSEDVTV 222
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 183
++ + GDD V +KSG E GI P+ + + + GIA+GSET+ G+ +V
Sbjct: 223 KNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNVKVSDCRILASHGGIAIGSETAAGISDVE 282
Query: 184 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG-------------- 229
+ GI +K+ RGG I NI +S + M+ I +
Sbjct: 283 VSNCTFDGTRRGIRLKSRRTRGGTIENINLSGLKMDLCWCPISLEQYFAPGVLPEEEATV 342
Query: 230 -DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNIN 283
D G P D+ P+ + I+IK++ T V+ + I GL + + + N +
Sbjct: 343 LDEGPQPVDETTPH----IRNISIKNIKATNVRATAAFIVGLPEANIENVEIENFD 394
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ F+ +++ + V+FQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGD 279
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G + + T G V
Sbjct: 280 GLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCTVYKGHGGFVV 339
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME----NAR 222
GSE SGGV N+ + VG+ K+ GRGG +IRNI++ D+ E N
Sbjct: 340 GSEMSGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPVTFNLY 399
Query: 223 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 275
G K A +V G+ K P P I I+ + + +++ G+ P
Sbjct: 400 YGGKSAVEVLESGEVVPVKVAPMPVDETTPCFRNIHIEHLTCSNARRAMYFNGIPEMPID 459
Query: 276 GICLSNINL 284
GI L +I +
Sbjct: 460 GITLKHIRI 468
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 35/255 (13%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP +++F R ++IS++ + P W +HPV C+NV +R +T+ + NTDG+DP+
Sbjct: 221 YLRPKMVQFNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPE 278
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+S V I +T DD VAVK+G DE G G PS I ++ S + GI VGSE S
Sbjct: 279 ASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCDFSGRWGGITVGSEMS 338
Query: 177 GGVENVLAEHINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 227
GGV V AE + Y V +++K + RGGF+ + V + + +
Sbjct: 339 GGVRRVFAEDCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFV 398
Query: 228 -----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTGI 277
G+ G HP ++++D+ + + G + GL+ G+
Sbjct: 399 NMDYNGGEGGTHP--------------VSVRDIHLSHCRIDGARAVLRLVGLETDRLRGV 444
Query: 278 CLSNINLQGVAGPTS 292
L++ + GV GP +
Sbjct: 445 HLAHCDFTGVRGPDA 459
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 9/235 (3%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ +++I V +NSP W IHPV C NV+++ V I + PN DG +P+
Sbjct: 216 YLRPQFIQPYRCENVLIEGVTIRNSPMWEIHPVLCRNVIVQNVII--NSHGPNNDGCNPE 273
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S ++V I+D TGDD +A+KSG + G P+ I + GI VGSE S
Sbjct: 274 SCTDVLIKDCDFDTGDDCIAIKSGRNADGRRLKAPTENIIVTGCRMKDGHGGITVGSEIS 333
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKIAGDVGD 233
GGV N+ A + L N+ + VK N RGG + N+ ++ + + A I I + +
Sbjct: 334 GGVRNLFASNCRLDSPNLDHALRVKNNAMRGGLLENLHFRNIDVGQVAHAVITIDFNYEE 393
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
F PVV T+ + TK + + +QGL +P + L+N VA
Sbjct: 394 GAKGSFT----PVVRDYTVDGLRSTKSKYALDVQGLATAPIVNLRLTNCIFDNVA 444
>gi|387904260|ref|YP_006334598.1| Polygalacturonase [Burkholderia sp. KJ006]
gi|387579152|gb|AFJ87867.1| Polygalacturonase [Burkholderia sp. KJ006]
Length = 664
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 389
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V E +TGDD VA+KSG D EYG A H IR T +S GI +GS
Sbjct: 390 ACTDVLCERCTFNTGDDCVAIKSGKDRDTEYGPAKRH-----LIRDCTMNSGHGGITLGS 444
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 445 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVLPN---GVN 501
Query: 227 IAG 229
+ G
Sbjct: 502 LKG 504
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 109/233 (46%), Gaps = 7/233 (3%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP+ IE ++++I V NSP W IHP C+NV +R VT+ + N DG DP+
Sbjct: 204 FLRPSFIEPYRCKNVLIEGVTIVNSPMWEIHPTLCTNVTVRGVTVHSLGT--NNDGCDPE 261
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S +V IED TGDD +A+KSG + G G + I IRR T G+ +GSE S
Sbjct: 262 SCHDVLIEDCTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCTMKDGHGGVTIGSEVS 321
Query: 177 GGVENVLAEHINLYN--VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GGV NV + + + K+N RGG I NI VS V + R + D+
Sbjct: 322 GGVRNVFVSDCQMDSPRLDRAFRFKSNAVRGGEIENIQVSQVKI--GRVARAVLSVEFDY 379
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
+ P PV+ + I++V I + + L + GV
Sbjct: 380 EEGAHGPE-RPVLRHVRIENVTAESCGSVATITSFPAAVIDDVRLKDCTFHGV 431
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 12/235 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN IEF +++I ++ N+PFW +HP+ +N++I VT+ + PN DG DP+
Sbjct: 220 YLRPNFIEFFECNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTV--NSHGPNNDGCDPE 277
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N+ I++ +TGDD +A+KSG D G PS I ++ G+ +GSE S
Sbjct: 278 YSQNIIIKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCKMIDGHGGVVIGSEIS 337
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 231
GV NV E+ ++ N+ I +KTN RGG I ++ V ++ + ++ + + +V
Sbjct: 338 AGVNNVFVENCIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYNV 397
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 285
F +PV+ I++++V K + G+ +G K SP + L N+ ++
Sbjct: 398 YGSQTGSF----IPVIRNISLENVTVKKAGKYGVWAEGYKESPVENVTLKNVVIE 448
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 14/241 (5%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+ ++ I +V NSP + +HPV C NV+ R V + + PN DG DP+SS
Sbjct: 211 RPMFIQPYRCTNVQIEDVTITNSPMYEMHPVLCRNVIARNVKV--SSHGPNNDGCDPESS 268
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
+V I+ TGDD +A+KSG + G PS + ++ G+ +GSE SGG
Sbjct: 269 VDVLIDGCTFDTGDDCIAIKSGRNADGRRLHSPSENLIVQNCVMKDGHGGVTMGSECSGG 328
Query: 179 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVGDH 234
+ NV A+ + N+ V + K N RGG I + VYM N + G + A DV +
Sbjct: 329 IRNVFAQDCQMDSPNLNVALRFKNNAVRGGVIEH-----VYMRNVKAGQVAQAAIDVDFY 383
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 294
++ + PVV + + ++ K ++G K++P I + N AG T PP
Sbjct: 384 YEEGEKGSFTPVVRDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCTF---AGATKPP 440
Query: 295 L 295
+
Sbjct: 441 V 441
>gi|134292563|ref|YP_001116299.1| glycoside hydrolase family protein [Burkholderia vietnamiensis G4]
gi|134135720|gb|ABO56834.1| glycoside hydrolase, family 28 [Burkholderia vietnamiensis G4]
Length = 664
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 389
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V E +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 390 ACTDVLCERCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRDCTMNSGHGGITLGS 444
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 445 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVLPN---GVN 501
Query: 227 IAG 229
+ G
Sbjct: 502 LKG 504
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 14/257 (5%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP E S +++I V F N+PFW +HP+ C+NV + V +++ PN DG +P+ S
Sbjct: 214 RPTFFEPFESENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNPEYS 271
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I + TGDD +A+KSG ++ G G S I + G+ +GSE S G
Sbjct: 272 KNVHITNCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCIMKDGHGGVVMGSEISAG 331
Query: 179 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVGDHP 235
V NV + + N+ I +KTN RGGF+ N+ V D+ + ++ +KI +
Sbjct: 332 VRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKINTYYAIY- 390
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQGVAGP---- 290
D +P + I I++V + G LIQG + +P + N+ ++ P
Sbjct: 391 -DNQEGEHIPTIKNIHIENVTVEDGGKYGILIQGREENPVKNVTFKNVTIKKAEMPMRVE 449
Query: 291 TSPPLKCSD--VSGSAY 305
S P++ ++ + G Y
Sbjct: 450 NSEPIEFTNTTIGGQKY 466
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 142/332 (42%), Gaps = 50/332 (15%)
Query: 3 FGLMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAI--WWNM----------- 49
+ L+ W + + + I+ GE GT+DGQG+ WW+
Sbjct: 117 YPLVFTRWEGIELMNYSPLVYARQQRNIAITGE-GTLDGQGSARHWWSWKGPWGGTVDHG 175
Query: 50 WRQ-----------------RTLP----------FTRPNLIEFMNSRSIIISNVIFQNSP 82
WR+ R +P F RP ++ + +++I V + +P
Sbjct: 176 WREGMPDQRKARAILFEMAERRVPVEKRVFGEGSFLRPAFVQPYDCENVLIEGVKLRGAP 235
Query: 83 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 142
FW IHPV C N+++R V +L PN DG DP+S IE TGDD +A+ SG +
Sbjct: 236 FWQIHPVLCRNLIVRGVDVLG--HGPNNDGCDPESVDGALIERCTFDTGDDCIAINSGRN 293
Query: 143 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYNVGVGIHVKT 200
E G P+ I IR G+ VGS+ SGG + AE ++ ++ I K
Sbjct: 294 EDGRRLAMPAQNILIRDCRMKEGHGGVVVGSQISGGARWIFAERCVMDSPDLWYAIRFKN 353
Query: 201 NIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTK 259
N RGG + N D+ + +R + + + + +F +P + + I+ +
Sbjct: 354 NALRGGLLENFFYRDIDVGTVSRAAVTCDFNYEEGANGRF----VPRLRNVVIERLRTKN 409
Query: 260 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
+ QGL +P TG+ L + + GV P+
Sbjct: 410 AARVLDSQGLPGAPVTGVTLRDCSFDGVTQPS 441
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP L+ F I++ +V SPFW IHP++ +++ +R V ++ D PN DG DP+
Sbjct: 219 RPQLVSFNKCEGILLEDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCDPECC 276
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
V IED + +TGDD +A+KSG + G PS I IR + G+ VGSE SGG
Sbjct: 277 DRVLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGHGGVVVGSEISGG 336
Query: 179 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 235
+NV A ++ + + +KTN RGG I NI + ++ + ++ + KI D +H
Sbjct: 337 CQNVYAHDCVMDSPELERVLRIKTNSCRGGIIENINMRNITVGKCKESVLKINLDY-EH- 394
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT-GICLSNINLQGV 287
++ P+V + +++V + Q I GL F I + N + GV
Sbjct: 395 NEICCRGYYPIVRNVYMENVTSQQSQYGVQIIGLDEDTFVYDINVKNCHFNGV 447
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 136/300 (45%), Gaps = 46/300 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWN-MWRQRT------------------LPFTRPNLIEFMNS 68
+ +S G GT+DGQG IWW W RP + S
Sbjct: 98 QNVSLTG-TGTLDGQGRIWWQRFWGDDEHGGMVGDYSANGLRWVVDYDCQRPRNVLVYES 156
Query: 69 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 128
++I++ + S FWN+H Y +V + ++I+ A P+TDGID DS V IE +
Sbjct: 157 KNILLKDFTSCESGFWNVHLCYSRDVAVENLSIINSA-GPSTDGIDIDSCEQVRIERCTV 215
Query: 129 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 188
S DD + +K+G + I IR + SGI +GSETSGG+E+VL E+
Sbjct: 216 SCNDDNICIKAGRGREAAPKARTARAIVIRECV-LNKGSGITLGSETSGGIEHVLIENNR 274
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------------AGDVGDHPD 236
GVG +K+ RGGFIR+ITV ++ ++N R + I +G++ D P+
Sbjct: 275 FNGTGVGFRIKSARNRGGFIRHITVRNLLLQNVRFPVLIQLNWFPQYSYGDSGNLQDKPE 334
Query: 237 D------------KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
+ P ++ IT + ++ I+G + P G+ L NI++
Sbjct: 335 HWRKLADGVEGEAGLTEVSHPTLSNITARRSDSNLFSRAFFIEGYPDRPVCGLTLDNISV 394
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 7/266 (2%)
Query: 31 SFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 90
+F G+++ +G +W RP L+ F + +++ + V F+NSP W +HP+
Sbjct: 154 NFTSRPGSVNKKGDVWE---PDSNAANIRPVLLNFTSCKNVKLEGVTFKNSPAWCVHPLL 210
Query: 91 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 150
C NV I + + P + N D +D +S NV I +S GDD + +KSG +E G G
Sbjct: 211 CENVTIDNIKVNNPWYAQNGDALDVESCKNVVIINSLFDAGDDAICIKSGKNEAGRRRGV 270
Query: 151 PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 210
P + I+ T G +GSE SGGV+N+ VG+ K+ GRGG + N
Sbjct: 271 PCENVYIKNNTVLHGHGGFVIGSEMSGGVKNIYISDCTFIGTDVGLRFKSARGRGGVVEN 330
Query: 211 ITVSDVYMENARK---GIKIAGDVGDHPDDKFNPN-ALPVVNGITIKDVWGTKVQQSGLI 266
I + + M+N + + P ++ + N PV I +K++ +S +
Sbjct: 331 IYIDRINMKNIVNEAITMNLYYSSNGKPAERTDVNEGTPVFRNIEMKNLLVEGAGKSFYL 390
Query: 267 QGLKNSPFTGICLSNINLQGVAGPTS 292
GL P I + N+ + +A +S
Sbjct: 391 YGLPEMPLENISIQNMRVSKIAETSS 416
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ +GE GTIDGQGA+WW WR+ RP LI S +++I V
Sbjct: 130 IADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRSHNVLIDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G I I T GI++GSE++GGV NVL E+ GI
Sbjct: 249 KAEKADPRFPDG-VVDNIYIANNTLKQG-RGISIGSESAGGVNNVLVENNTFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMEN--------------------ARKGIKIAG-DVGDH-- 234
+K+ G+GG ++NI + M N K +K G +G+
Sbjct: 307 IKSPRGKGGEVKNIVYRNTKMHNVEVPLVFSAYYKAAPIVEAEVEKLLKEGGFTLGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + IT++++ T + + I G +P +G +N+N++
Sbjct: 367 PPDSDPKQPFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFTNVNIEAAQ 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 130/292 (44%), Gaps = 47/292 (16%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLP------------------------FTRPN 61
+ E IS IG+ GTIDG + W+ + + RP
Sbjct: 144 QLENISIIGK-GTIDGNAGSTFATWKSQQKKGQQLSRDMNHNETPVEERNFGEGYYLRPQ 202
Query: 62 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 121
LI+F ++I + V NSPFW IH + N++ R + A N DGIDP+ + N+
Sbjct: 203 LIQFFACKNITLEGVFITNSPFWCIHLLKSENIICR--GLRYDAKLVNNDGIDPEFTRNL 260
Query: 122 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 181
IE+ + GDD VA+K G D G PS I IR G+ +GSE S GV+N
Sbjct: 261 LIENIEFNNGDDNVAIKCGRDNDGWTTARPSENIIIRNCKFKG-LHGVVLGSEMSAGVQN 319
Query: 182 VLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD------- 233
V E+ GI++KTN RGGFIRNI Y+ N R G+V D
Sbjct: 320 VFIENCTYGGYCKRGIYIKTNPDRGGFIRNI-----YVNNCR-----FGEVEDLFYATSM 369
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 284
+ + + V+ I +KDV K + L+ QG P + N+N+
Sbjct: 370 YAGEGMDNTHFTEVHDIYVKDVTCQKASAAALVLQGTTVKPIYNVRFENVNV 421
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 35 ENGTIDGQGAI----------WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
+N + GQG I WW + R + F RP +I + +++ + QNSP W
Sbjct: 210 KNVVLYGQGLIEGNAGYEEDNWWYNAKVRRIAF-RPRMIFLNHCEHVVVQGIRVQNSPSW 268
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
NIHP + +++ +T+L P DSPNTDG+DP+S +V I Y S GDD +A+KSG
Sbjct: 269 NIHPYFSNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYM 328
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
G Y PS I IR+ I +GSE +GGV+++ + + G+ +KT GR
Sbjct: 329 GAKYRVPSEDIVIRQCCMRDGHGSITIGSEMAGGVKHLTVKDCLFLHTDRGLRIKTRRGR 388
Query: 205 G 205
G
Sbjct: 389 G 389
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 19/244 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ R + I+ + ++I V ++SP W IHPV V++R V I+ PNTDG++P+
Sbjct: 210 YLRSSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSELVIVRGVHIIG--HGPNTDGVNPE 267
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IED Y GDD +A+KSG +E G G PS I IRR G+ +GSE S
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHGGVTIGSEIS 327
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------A 228
GGV + AE+ ++ N+ + +KTN RGG I +I + +++ + +
Sbjct: 328 GGVRYIYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEE 387
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
GD G H PVV I ++ + + + I +SP T + N + V
Sbjct: 388 GDAGPH---------RPVVRHIQVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVT 438
Query: 289 GPTS 292
P S
Sbjct: 439 YPLS 442
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ GE GTIDGQGA+WW WR+ RP LI +S ++++ +V
Sbjct: 130 IADAQNVAITGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDSVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP ++I Y +V + IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + + GI++GSETSGGV NVL E+ GI
Sbjct: 249 KAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGGVNNVLVENNQFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+KT G+GG ++NIT + M + + A +G+
Sbjct: 307 IKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P+ F+ P + +TI+++ T K + + I G+ +P +G N+ +
Sbjct: 367 PPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADK 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 18/259 (6%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP E +I++ +V F N+PFW +HP+ N+ + VT+ + PN DG DP+ S
Sbjct: 216 RPTFFEPFECENILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEYS 273
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I++ TGDD +A+KSG ++ G PS I + G+ +GSE S G
Sbjct: 274 KNVHIKNCLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCEMKDGHGGVVMGSEISAG 333
Query: 179 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVGDHP 235
V NV + + N+ I +KTN RGGF+ N+ V ++ + ++ +K+ G +
Sbjct: 334 VRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIYA 393
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQGVAGPT 291
+ + + +P + I I+DV KV G L++G + P I N+ + A P
Sbjct: 394 NQE--GDYMPSIKNIHIEDV---KVDNGGKYGILVRGREALPVKNITFKNVVINKAATPM 448
Query: 292 ----SPPLKCSDVSGSAYQ 306
S P++ ++ S + Q
Sbjct: 449 LIEHSEPIQFTNTSINGKQ 467
>gi|344175292|emb|CCA87961.1| polygalacturonase [Ralstonia syzygii R24]
Length = 680
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 24/185 (12%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP +IEF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 348 YLRPCMIEFIGCTNVLMEAYRTHATPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 403
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
PD+ SNV ED +TGDD +A+KSG + YG A H I+ +S GI +
Sbjct: 404 PDACSNVLCEDMTFNTGDDCIAIKSGKNLDTTYGPAQNH-----VIQNCVMNSGHGGITL 458
Query: 172 GSETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
GSE GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G
Sbjct: 459 GSEMGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN---G 515
Query: 225 IKIAG 229
+ + G
Sbjct: 516 VSLTG 520
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQ------RTLPFTRPNLIEFMNSRSIIISNVI 77
I+ + ++ GE GTIDGQGA+WW WR+ + RP LI S +++ V
Sbjct: 137 IADAQNVAITGE-GTIDGQGAVWWERWREAIRATGKKGGTDRPRLIYITRSSQVLVDGVT 195
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
NSP +++ Y +V + +I+AP +PNTD IDP S N+ I ++ I DD +A+
Sbjct: 196 LTNSPSFHVVMRYARDVTVNGTSIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAI 255
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + V GI++GSETSGGV NVL E+ GI
Sbjct: 256 KAEKPDSRFPDGVVDNVYIANNVLKQG--RGISIGSETSGGVNNVLVENNRFEGSMYGIR 313
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+K+ G+GG ++N+T M N + +G +G+
Sbjct: 314 IKSLRGKGGEVKNVTYRHTRMVNVEVPLVFSGYYQAAPIVQAEVDKLLQAGGFTLGEQIY 373
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + ITI D+ T + + +G I G+ +P +G + ++
Sbjct: 374 PPDTEPAQPFDKVKTPHFSNITIVDLESTGRSKAAGYIIGVPEAPLSGFHFEQVRIEAEK 433
Query: 289 G 289
G
Sbjct: 434 G 434
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN I+ +++ I V NSP W IHPV C NV + V ++ PNTDG+DP+
Sbjct: 180 YLRPNFIQPYRCKNVFIQGVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPE 237
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S ++ I++ GDD +A+KSG + G PS I I G+ +GSE S
Sbjct: 238 SCKSMIIKNCLFDNGDDCIAIKSGRNADGRRINVPSENIVIENNEMKDGHGGVTIGSEIS 297
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 231
GGV+NV AE ++ N+ + +KTN RGG ++NI +++ ++ I + +
Sbjct: 298 GGVKNVFAEGNLMDSPNLDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQEVIAIDMEYEE 357
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
GD + K PVV GI + ++ + + +SP TG+ ++N + V P
Sbjct: 358 GDAGEFK------PVVRGIEVDELKSAGGRYGIRVLAYDHSPVTGLKVTNSEINDVNIPM 411
Query: 292 S 292
Sbjct: 412 E 412
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 21/204 (10%)
Query: 36 NGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNV 76
+GT+DGQGA+WW+ + +R L + RP + S + + +
Sbjct: 105 SGTLDGQGAVWWHKFWGDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDF 164
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
Q+S FWN+H Y V ++ + ++ A P+TDGID DSS V +E +S DD +
Sbjct: 165 TSQDSGFWNLHVCYSKQVNLQRLRVM-NATGPSTDGIDIDSSQLVRVEGCTVSCNDDNIC 223
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSG G + I IR T SGI +GSETSGG+ENV+ EH GVG
Sbjct: 224 VKSGRGAEAQQLGRTARDIIIRDCT-LLKGSGITLGSETSGGIENVIIEHNRFSGTGVGF 282
Query: 197 HVKTNIGRGGFIRNITVSDVYMEN 220
+K+ RGG+I+NI V + ME+
Sbjct: 283 RIKSARNRGGWIKNIVVRHLKMED 306
>gi|300693779|ref|YP_003749752.1| polygalacturonase [Ralstonia solanacearum PSI07]
gi|299075816|emb|CBJ35125.1| Polygalacturonase [Ralstonia solanacearum PSI07]
Length = 680
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 24/185 (12%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP +IEF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 348 YLRPCMIEFIGCTNVLMEAYRTNATPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 403
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
PD+ SNV ED +TGDD +A+KSG + YG A H I+ +S GI +
Sbjct: 404 PDACSNVLCEDMTFNTGDDCIAIKSGKNLDTTYGPAQNH-----VIQNCVMNSGHGGITL 458
Query: 172 GSETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
GSE GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G
Sbjct: 459 GSEMGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN---G 515
Query: 225 IKIAG 229
+ + G
Sbjct: 516 VSLTG 520
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 88/167 (52%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 279
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S N I +S GDD + +KSG DE G G + + T G V
Sbjct: 280 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFVV 339
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
GSE SGGV NV + VG+ K+ GRGG + NI + ++ M
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 110/238 (46%), Gaps = 11/238 (4%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP + + I+I V QNSP WN+HP+ C+N+ +R I + N DG+D +S
Sbjct: 195 RPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIRNANFAQNGDGLDLESC 254
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
V I GDD + +KSG + G P+ + IR G +GSE S G
Sbjct: 255 RFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDCVVYHGHGGFVIGSEMSRG 314
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG----------IKIA 228
V +V+ E+ GI K+ IGRGG + +IT+ ++ M + + ++
Sbjct: 315 VRDVVIENCLFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIEEDAIIFTMGYTLFRLD 374
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
D P D + +P ITI+DV + Q+ I GL+ P I L N+ +Q
Sbjct: 375 HQASDEP-DTISKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQMPIHDIILENVMIQA 431
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 36 NGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNV 76
+GT DGQGA+WW+ + +R L + RP + S + + +
Sbjct: 105 SGTFDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDF 164
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
Q+S FWN+H Y V ++ + ++ A P+TDGID DSS V +E +S DD +
Sbjct: 165 TSQDSGFWNLHVCYSKQVNLQRLRVMN-ATGPSTDGIDIDSSQLVRVESCTVSCNDDNIC 223
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSG G + I IR T SGI +GSETSGG+ENV+ EH GVG
Sbjct: 224 VKSGRGAEAQQLGRTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGF 282
Query: 197 HVKTNIGRGGFIRNITVSDVYMEN 220
+K+ RGG+I+NI V + ME+
Sbjct: 283 RIKSARNRGGWIKNIVVRHLKMED 306
>gi|344171385|emb|CCA83875.1| polygalacturonase [blood disease bacterium R229]
Length = 680
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 24/185 (12%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP +IEF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 348 YLRPCMIEFIGCTNVLMEAYRTNATPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 403
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
PD+ SNV ED +TGDD +A+KSG + YG A H I+ +S GI +
Sbjct: 404 PDACSNVLCEDMTFNTGDDCIAIKSGKNLDTTYGPAQNH-----VIQNCVMNSGHGGITL 458
Query: 172 GSETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
GSE GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G
Sbjct: 459 GSEMGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN---G 515
Query: 225 IKIAG 229
+ + G
Sbjct: 516 VSLTG 520
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 35 ENGTIDGQGAI----------WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
EN I G+G I WW+ ++ F RP ++ + ++I + +NSP W
Sbjct: 201 ENAVIYGRGVIEGNAGFGEENWWHDPKRMKTAF-RPRMVFLERCKHVVIQGLTLRNSPSW 259
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
NIHP + ++ + +L+P DSPNTDG+DP+S +V I S GDD +AVKSG
Sbjct: 260 NIHPYFSEHLKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICFSVGDDCIAVKSGKIYM 319
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGR 204
G Y PS I + R + +GSE +GGV+N+ + G+ +KT GR
Sbjct: 320 GTTYKRPSEDIVVSRCCMRDGHGSVTIGSEMAGGVKNLTVRDCVFRHTDRGLRIKTRRGR 379
Query: 205 G--GFIRNITVSDVYMENAR 222
G + I ++M+ +
Sbjct: 380 GKNAVVDGILFERIHMDQVK 399
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 8/236 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP +E + +++I V F N+PFW IHP+ V + VT+ + PN DG DP+ S
Sbjct: 231 RPLFLETLECENVLIQGVTFTNAPFWVIHPLKSKYVTVDGVTV--NSHGPNNDGCDPEYS 288
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
V I + +TGDD +A+KSG + G PS I + G+ +GSE S G
Sbjct: 289 KYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCDMKDGHGGVVMGSEISAG 348
Query: 179 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 235
V NV + +N N+ I +KTN RGGF+ N+ V D+ + ++ + KI G +
Sbjct: 349 VRNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVENVYVKDIEVGQVKEAVLKINTYYGIY- 407
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQGVAGP 290
K +P + I +++V + G LIQG + P TGI N+ ++ P
Sbjct: 408 -GKQEGEFIPTIQNINLENVTVENGGKYGLLIQGREEKPVTGISFKNVTIKNADTP 462
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ +GE GTIDGQGA+WW WR+ RP LI + +++I V
Sbjct: 130 IADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G I I T GI++GSE++GGV NVL E+ GI
Sbjct: 249 KAEKADPRFPDG-VVDNIYIANNTLKQ-GRGISIGSESAGGVNNVLVENNTFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-- 234
+K+ G+GG ++NI S+ M N K ++ G +G+
Sbjct: 307 IKSPRGKGGEVKNIVYSNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + IT++++ T + + I G +P +G SN+N++
Sbjct: 367 PPDSDPKQPFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADR 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 23/294 (7%)
Query: 15 IFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIIS 74
++R + F +S E SFI GT+ GAIW+ L RP ++ F+ +++
Sbjct: 161 LWRPVKRFKVSNAEWNSFIKTGGTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLLQ 220
Query: 75 NVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDL 134
V+FQNSP ++++ + N+V+ + + P ++ N DGID S +N I + + GDD
Sbjct: 221 GVVFQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGDDA 280
Query: 135 VAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGV 194
+ +KSG + G G P + I I T G +GS+T GG++ V + +
Sbjct: 281 ICLKSGIGDVGRRRG-PCANIIIDNCTVFHGHGGFVIGSDTGGGIDRVSVRNCRFIDTDT 339
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARK-----------------GIKIAGDVGDHPDD 237
G+ K+ GRGG + N+ V ++ M + GI G++ D P
Sbjct: 340 GLRFKSKRGRGGVVSNVYVDNIMMNDIANYAIWFDSYYQEKTPEPDGIPEGGEMTDVP-- 397
Query: 238 KFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
F P + P I I ++ ++ GL + + L++ + VAG
Sbjct: 398 -FMPVTDDTPCFQDIHISNITCRDAGRAMFFNGLPEMNVSNVSLTDCMIHSVAG 450
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V IN +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDINFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGGVIENIRVENLNM 308
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E + GE G +DG + WW +++ + + RPN + N ++I + + NSP W
Sbjct: 191 ENVLIFGE-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLYNCKNIAMQGLCIMNSPSWT 248
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
+HP Y N++ TI+ P +SPNTDG+DP+S NV I + IS GDD VA+KSG
Sbjct: 249 LHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMA 308
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
+ + P+ I IR + +GSE + GV +V G+ +KT GRG
Sbjct: 309 LKHYKPAKNIVIRNSIFRKGHGSVTIGSEVAAGVYDVRVGKCIFEGTDRGLRIKTRRGRG 368
Query: 206 --GFIRNITVSDVYMENA----RKGIKIAGDVGDHPD-----DKFNPN-ALPVVNGITIK 253
+ NI ++ M++ + D H D DK N P + I +
Sbjct: 369 EKSVLDNICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAAR 428
Query: 254 DVWGTKVQQ-SGLIQGLKNSPFTGICLSNINL 284
D+ V+ + GL P I L NI L
Sbjct: 429 DIRCENVKNIFACLYGLPEMPVEEIVLENITL 460
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGGV V AE I +++ I +KT+ GRGG++RN+ +S++ + N I+ G G+HP
Sbjct: 2 SGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEHP 61
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 295
D+ ++P+ALP++ ITIKDV G V+++GLIQG+K F ICLSNI+L + P
Sbjct: 62 DEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISLN---VSSKVPW 118
Query: 296 KCSDVSGSAYQVKPWPCSELSS 317
CSDV G + V P C L
Sbjct: 119 NCSDVKGYSDLVSPEVCEPLKE 140
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 10/236 (4%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F +++ V NSPFW IHP +VVIR V + A N DG+DP+ S
Sbjct: 206 RPQFIQFNRCEKVLLEGVKITNSPFWVIHPFMSKDVVIRDVQVFAHGH--NNDGVDPEMS 263
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
N+ IE+ GDD +AVKSG ++ P+ I IR + +A+GSE SGG
Sbjct: 264 QNMLIENCIFDQGDDAIAVKSGRNQDAWRLNMPTKNIVIRNSLVKNGHQLLAIGSELSGG 323
Query: 179 VENVLAEHINLY---NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK-IAGDVGDH 234
VENV E+ + + ++VKTN RGG++RN+ + ++ KG+ I DV
Sbjct: 324 VENVYMENCEVQEGAKLNHLLYVKTNERRGGYVRNVHMKNIQCGKIDKGVLGIETDVLYQ 383
Query: 235 PDD---KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
D + P+ N I +++V V I+ SP + L NI ++ +
Sbjct: 384 WRDLVPTYERRLTPIEN-IYMENVRAADVAFVSRIKADPESPVEVVQLKNIQVESI 438
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 37 GTIDGQGAIW--WNMWRQRT----LPFTR--------------PNLIEFMNSRSIIISNV 76
GT++GQG W W + R +P +R PN + F S++I++ +
Sbjct: 174 GTLEGQGQHWLEWGTVQPRANAAKVPLSRRKNFGKGAGKEGMRPNFVVFWKSKNILVEGI 233
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
SP WNIH VY N ++R +T+ + DS N DG+ DSS +V +E + + TGDD +
Sbjct: 234 TLNESPMWNIHLVYSQNAIVRDITVNS-LDSQNGDGVVVDSSHDVLLEYNQLHTGDDAIV 292
Query: 137 VKSGWDEYGIAYGHPSSGITIRRV------TGSSPFSGIAVGSETSGGVENVLAEHINLY 190
+KSG++E G+A P+ + IR TGS G+ GSETSGG+ NV
Sbjct: 293 LKSGFNEDGLAINIPTENVVIRNYYAYKVRTGS---GGVVFGSETSGGIRNVYVHDAVFE 349
Query: 191 NVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GI KT GRG I NI V D+ M++
Sbjct: 350 KCDRGIRFKTARGRGNVIENIFVRDISMKD 379
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 16/249 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP L+ F++ ++++ V FQNSP WN+HP+ C NV I +T+ P S N DG+D +
Sbjct: 231 FLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYSQNGDGLDIE 290
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N + + GDD + +KSG D G G P + + G VGSE S
Sbjct: 291 SCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCVVYHGHGGFVVGSEMS 350
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN---------ARKGIKI 227
GGV+N+ + VG+ K+ GRGG + NI + ++ M N G K
Sbjct: 351 GGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDMINIPTDALLFDLYYGGKS 410
Query: 228 AGDV---GDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 280
A +V GD ++ N A+ P ITI V +++ GL + +S
Sbjct: 411 ASEVLADGDEVKEESNIPAVTEETPAFRNITISRVNCQGARRAMYFNGLPEMNVQNVTVS 470
Query: 281 NINLQGVAG 289
+ N+ G
Sbjct: 471 DCNITAQLG 479
>gi|413961867|ref|ZP_11401095.1| glycoside hydrolase family protein [Burkholderia sp. SJ98]
gi|413930739|gb|EKS70026.1| glycoside hydrolase family protein [Burkholderia sp. SJ98]
Length = 664
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 21/176 (11%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ + N+PFW HP C NVV+R VT+ DS PN DG D
Sbjct: 332 YLRPCMVEFIGCTNVLMESYRTNNTPFWQHHPTDCRNVVMRSVTV----DSIGPNNDGFD 387
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
PD+ V E+ +TGDD +A+KSG D +YG A H I+ T +S GI +
Sbjct: 388 PDACDTVLCENVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCTMNSGHGGITL 442
Query: 172 GSETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GSE GGV+ + A ++ + N + + I +KTN+ RGGF+++ V +V + N
Sbjct: 443 GSEMGGGVQKIYARNLQMLNKFWATNSLNIAIRIKTNMNRGGFVKDFYVDNVTLPN 498
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 125/235 (53%), Gaps = 8/235 (3%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP IE +++I ++ N+PFW +HP+ +NVV+ +T+ + PN DG DP+
Sbjct: 216 FLRPTFIEPFGCENVLIKDITIINAPFWVVHPIKSNNVVVDGITV--DSHGPNNDGCDPE 273
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+ NV I++ +TGDD +A+KSG +E G PS I + G+ +GSE S
Sbjct: 274 YAKNVWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCKMIDGHGGVVMGSEIS 333
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGD 233
GV NV ++ + N+ I +KTN RGGF+ N+ V ++ + ++ + KI G
Sbjct: 334 AGVRNVFVQNCQMDSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGI 393
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQGV 287
+ K + +P V+ + ++++ + G L+ G + SP + L N+ ++ V
Sbjct: 394 YGVQK--GSFMPKVSNVYLENIAVDNGGKYGVLVNGYEESPVKNVFLKNVTIKKV 446
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 88/164 (53%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ NS+ I++ FQNSP WNIHP+ +++IR + + P S N DG+D +
Sbjct: 236 FLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQNGDGLDLE 295
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I D+ GDD + KSG D+ G G P+ + ++ G +GSE S
Sbjct: 296 SCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNIVYHGHGGFVIGSEMS 355
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GGV NV VG+ K+ GRGG + NI +S++ M N
Sbjct: 356 GGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIN 399
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ G+ GTIDGQGA+WW WR+ RP LI +S ++++ V
Sbjct: 130 IADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V + IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + + GI++GSETSGGV NVL E+ GI
Sbjct: 249 KAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGGVNNVLVENNQFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+KT G+GG ++NIT + M + + A +G+
Sbjct: 307 IKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P+ F+ + P + +TI+++ T K + + I G+ +P +G N+ +
Sbjct: 367 PSDTDPEQPFDQHKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADK 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ F +++ ++FQNSP WN+H ++++ + + P + N DGID +
Sbjct: 225 FLRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNGDGIDIE 284
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S +N+ + DS+ GDD + +KSG DE G G P+S I + G VGSE S
Sbjct: 285 SCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYHGHGGFVVGSEMS 344
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GGV+N+ + VG+ K+ GRGG + NI + ++ M +
Sbjct: 345 GGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMND 388
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 143/296 (48%), Gaps = 34/296 (11%)
Query: 35 ENGTIDGQGAIWWNMWRQRTLP--------FTRPNLIEFMNSRSIIISNVIFQNSPFWNI 86
E G IDG G I+W M R +P + RP L++ S+ + ++ QNSP +N+
Sbjct: 124 EGGIIDGSGDIFWEMARTHRVPNDTSGSGGYPRPMLVDITESQHLTFDHITLQNSPMYNL 183
Query: 87 HPVYCSNVVIRYVTILAPADS-PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
+C + I + I PA + PNTDGIDP SS N+ I I TGDD +A+KSG E
Sbjct: 184 TFFFCDGIKIDHTIIRNPAKTGPNTDGIDPFSSKNIEISYVDIDTGDDDIALKSGLVERD 243
Query: 146 IAYGHPSSGITIRRVTGSSPFS---GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 202
G P + I S F G++VGSE +GG+ +V E+I + N G+ +K+N
Sbjct: 244 PKIG-PVEHVYIH----DSIFRHGHGLSVGSELAGGISDVRVENIVMENTDAGVRIKSNR 298
Query: 203 GRGGFIRNITVSDVYMENARKGIKI---------AGDVGDHPDDKFNPNALPVVNGITIK 253
RG I ++ ++ M + I+I AG D P + I+++
Sbjct: 299 TRGNDIHDLHYKNIQMTGVGQPIQITEYYPKWPAAGTDTAKAVDAHTPR----FHDISLE 354
Query: 254 DVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 309
++ T + + +I G+ P + L+ I++ G G ++ ++V+ VKP
Sbjct: 355 NITATGAKDA-IIIGIPEYPIQNLTLTKISISGEKGLQ---IRNAEVTMQDVVVKP 406
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G +GQ I W + RP ++ + S+ I++ V F+NSP W IHP+ C ++ +
Sbjct: 217 GQNNGQKEITDEEWTYMK-SWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTL 275
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
V + P S N D +D +S NV + + + GDD + +KSG DE G G P +
Sbjct: 276 NDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVI 335
Query: 157 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 216
I+ T G +GSE SGGV NV + VG+ K+ GRGG + NI + ++
Sbjct: 336 IKNNTVLHGHGGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNI 395
Query: 217 YM---ENARKGIKIAGDVGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLK 270
M N + + V D P+ P+ PV I I +V +++ GL
Sbjct: 396 NMIDISNDALTMDLYYAVNDFPETPI-PDVNEETPVFRNIYISNVLCRGAERAVYFNGLP 454
Query: 271 NSPFTGICLSNINL 284
P I + N+ +
Sbjct: 455 EMPLKNIFIKNMTV 468
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 36 NGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNV 76
+GT DGQGA+WW+ + +R L + RP + S + + +
Sbjct: 105 SGTFDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDF 164
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
Q+S FWN+H Y V ++ + ++ A P+TDGID D+S V +E +S DD +
Sbjct: 165 TSQDSGFWNLHVCYSKQVNLQRLRVMN-ATGPSTDGIDIDTSQLVRVESCTVSCNDDNIC 223
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSG G + I IR T SGI +GSETSGG+ENV+ EH GVG
Sbjct: 224 VKSGRGAEAQQLGRTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGF 282
Query: 197 HVKTNIGRGGFIRNITVSDVYMEN 220
+K+ RGG+I+NI V + ME+
Sbjct: 283 RIKSARNRGGWIKNIVVRHLKMED 306
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 105 LIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 165 IRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S GV +V IN +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGVSDVYIHDINFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSRERGGVIENIRVENLNM 308
>gi|421898567|ref|ZP_16328933.1| polygalacturonase protein [Ralstonia solanacearum MolK2]
gi|206589773|emb|CAQ36734.1| polygalacturonase protein [Ralstonia solanacearum MolK2]
Length = 679
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 347 YLRPCMVEFIGCTNVLMEAYRTHATPCWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 402
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 403 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 460
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 461 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN---GVSL 517
Query: 228 AG 229
G
Sbjct: 518 TG 519
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 121/270 (44%), Gaps = 22/270 (8%)
Query: 36 NGTIDGQGAI--------WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
N TI G+G I WW + R + RP L N ++ + + QNSP W IH
Sbjct: 191 NVTITGEGTIDGCTTHDNWWKNCKIRNTAW-RPRLFFINNCSNVTMHGITVQNSPSWTIH 249
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P + ++ V IL PA+S NTDG+DP+S +V + +YIS GDD +A+KSG
Sbjct: 250 PYFSKHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGDDCIAIKSGKIYMAQK 309
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
P+ +T+R+ + VGSE + GV++V N G+ VKT GRG
Sbjct: 310 EKTPTEDMTVRQCCMRDGHGAVTVGSEIAAGVKDVHIRDCMFMNTDRGLRVKTRRGRGKL 369
Query: 208 --IRNITVSDVYMENARKGIKIAGDVGDHPDDKFN----------PNALPVVNGITIKDV 255
+ +I+ ++ M+N + PD K + P + +T KD+
Sbjct: 370 SVLDDISFENIDMDNVMTPFVVNSFYFCDPDGKTEYVGSRKPLPVDDRTPSIKSLTFKDI 429
Query: 256 WGTKVQQSG-LIQGLKNSPFTGICLSNINL 284
+G I GL S + NIN
Sbjct: 430 NAKNCHVAGAYIFGLPESKVEKLTFENINF 459
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
++ F RP ++ + +++ FQNSP WNIHP+ NV+IR +TI P S N D
Sbjct: 228 EKVKDFLRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNGD 287
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S NV I ++ GDD + KSG +E G G P+ + ++ G V
Sbjct: 288 GLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIVYHGHGGFVV 347
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIK 226
GSE SGGV NV G+ K+ GRGG + NI +SD+ M E R +
Sbjct: 348 GSEMSGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDMIDIPTEPIRFNLF 407
Query: 227 IAGDV------------GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 274
G+ G+ + + P I +K++ +G GL
Sbjct: 408 YEGNAPVLDDGGNSVPSGEWSEPQPVTEETPSFRNIFMKNIRAHGFGNAGFFMGLPEMNL 467
Query: 275 TGICLSNINLQGVAG 289
+ L N L+G G
Sbjct: 468 QNVHLENALLRGKEG 482
>gi|83748914|ref|ZP_00945924.1| PehC [Ralstonia solanacearum UW551]
gi|207739187|ref|YP_002257580.1| polygalacturonase protein [Ralstonia solanacearum IPO1609]
gi|83724413|gb|EAP71581.1| PehC [Ralstonia solanacearum UW551]
gi|206592560|emb|CAQ59466.1| polygalacturonase protein [Ralstonia solanacearum IPO1609]
Length = 678
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 346 YLRPCMVEFIGCTNVLMEAYRTHATPCWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 401
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 402 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 459
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 460 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN---GVSL 516
Query: 228 AG 229
G
Sbjct: 517 TG 518
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV I + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRIYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGGVIENIRVENLNM 308
>gi|300697434|ref|YP_003748095.1| Polygalacturonase [Ralstonia solanacearum CFBP2957]
gi|299074158|emb|CBJ53703.1| Polygalacturonase [Ralstonia solanacearum CFBP2957]
Length = 679
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 347 YLRPCMVEFIGCTNVLMEAYRTHATPCWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 402
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 403 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 460
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 461 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN---GVSL 517
Query: 228 AG 229
G
Sbjct: 518 TG 519
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 113/235 (48%), Gaps = 18/235 (7%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F S ++++ + NSPFW IH N++IR + + A N DG+DP+ S
Sbjct: 207 RPQFIQFNRSENVLLEGISITNSPFWTIHTYLSKNIIIRNLNVYAHGH--NNDGVDPEMS 264
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IE+ GDD +A+KSG + G PS I IR T + IA+GSE SGG
Sbjct: 265 QNVLIENCVFDQGDDAIAIKSGRNPEGWRLKAPSKNIIIRNCTVKNGHQLIAIGSELSGG 324
Query: 179 VENVLAEHINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
+ENV + + + H +KTN GG++RNI Y N + G G +G
Sbjct: 325 IENVFVDSCVVMDGAKLNHLLFIKTNERMGGYVRNI-----YASNLQAGRIELGILGIET 379
Query: 236 DDKFN-PNALPVVNG--ITIKDVW-----GTKVQQSGLIQGLKNSPFTGICLSNI 282
D + N +P V IKDV+ VQ I G K P I L N+
Sbjct: 380 DVLYQWRNLVPTVERRLTPIKDVYLNNVTAKNVQFVSRILGQKELPIENIVLKNV 434
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ +GE GTIDGQGA+WW WR+ RP LI + +++I V
Sbjct: 130 IADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G I I T GI++GSE++GGV NVL E+ GI
Sbjct: 249 KAEKADPRFPEG-VVDNIYIANNTLKQ-GRGISIGSESAGGVNNVLVENNTFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-- 234
+K+ G+GG ++NI + M N K ++ G +G+
Sbjct: 307 IKSPRGKGGEVKNIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + IT++++ T + + I G +P +G SN+N++
Sbjct: 367 PPDSDPKQPFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADR 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 125/270 (46%), Gaps = 17/270 (6%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E ++ IG+ G IDG + WW + + + + RP + ++++I + +NSP W
Sbjct: 191 ENVNIIGD-GIIDGNSSFDTWWQDAKVKRIAW-RPRTVYLNKCKNVLIEGITIKNSPSWT 248
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHP+ N+ + I P D+PNTDG+DP+S +V I + S GDD +A+KSG
Sbjct: 249 IHPLMSQNLKFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVS 308
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
PS + IR + +GSE SGGV+NV E+ GI +KT GRG
Sbjct: 309 QKLPMPSENLIIRNCLMEYGHGAVVIGSEMSGGVKNVHVENCIFRKTDRGIRIKTRRGRG 368
Query: 206 --GFIRNITVSDVYMENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGITIK 253
G I I S++ ME I D + ++ LPV V I +K
Sbjct: 369 KTGVIDEIHASNIRMEGVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYVGNIYLK 428
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNI 282
D+ Q +G + GL + + NI
Sbjct: 429 DITCIDTQVAAGYMYGLPERKIERVDMENI 458
>gi|410684707|ref|YP_006060714.1| Polygalacturonase [Ralstonia solanacearum CMR15]
gi|299069196|emb|CBJ40456.1| Polygalacturonase [Ralstonia solanacearum CMR15]
Length = 683
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF++ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 351 YLRPCMVEFIDCTNVLMEAYRTHATPCWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 406
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 407 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 464
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+ + A ++ + N + + I +KTN+ RGG++R+ + DV + N G+ +
Sbjct: 465 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYIDDVTLPN---GVSL 521
Query: 228 AG 229
G
Sbjct: 522 TG 523
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 140/300 (46%), Gaps = 37/300 (12%)
Query: 23 LISKFEKISF-IGENGTIDGQGAIWWNMWRQRTLPFT-------------RPNLIEFMNS 68
LI+ +E+ + I G IDG G +WW+ + Q + RP LI+ S
Sbjct: 113 LINVYEQSNVKISGQGVIDGDGKMWWDKYWQVRKDYEPKGLRWAADYDTPRPRLIQIYKS 172
Query: 69 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDS 126
++ + + + S FW +H Y V + VTI P+TDGID DSSS+V ++++
Sbjct: 173 DNVELQGLTLRRSGFWTVHICYSRKVTVDGVTIRNNIGGRGPSTDGIDVDSSSDVLVQNA 232
Query: 127 YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 186
I DD + +K+G D G+ P+ + I VT +GI GSETSGG+ +V A
Sbjct: 233 DIECNDDAIVMKAGRDADGLRVNRPTENVVIHDVTVRDGAAGITFGSETSGGIRHVEAYR 292
Query: 187 IN-LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-------------KIAGDVG 232
I+ L +GI K+ RGG + +I++ D+ M N KI +
Sbjct: 293 IHVLAPSPIGILFKSAATRGGTVEDISIHDIDMRNVPTAFSVNFNWNPNYSYAKIPQGLQ 352
Query: 233 DHPD-----DKFNPNA--LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ PD + P A LP + I I ++ + Q+ + ++P G+ NI++Q
Sbjct: 353 NVPDYYKVMTQEVPRAQGLPHLKNIRISNIKASGSTQAFSVGAYADAPLQGVTFRNIDIQ 412
>gi|17549054|ref|NP_522394.1| polygalacturonase transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17431305|emb|CAD17984.1| polygalacturonase transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|219566923|dbj|BAH04954.1| polygalacturonase [Ralstonia solanacearum]
Length = 680
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 348 YLRPCMVEFIGCTNVLMEAYRTHATPCWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 403
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 404 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 461
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 462 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN---GVSL 518
Query: 228 AG 229
G
Sbjct: 519 TG 520
>gi|170697849|ref|ZP_02888934.1| glycoside hydrolase family 28 [Burkholderia ambifaria IOP40-10]
gi|170137236|gb|EDT05479.1| glycoside hydrolase family 28 [Burkholderia ambifaria IOP40-10]
Length = 664
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ + QN+PFW HP NVV+R VT + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTNS--IGPNNDGFDPD 389
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V E +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 390 ACTDVLCEGCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 444
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 445 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 501
Query: 227 IAG 229
+ G
Sbjct: 502 LKG 504
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 18/242 (7%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F +I++ V NSPFW IHP +VV+R + + A N DG+DP+ S
Sbjct: 207 RPQFIQFNRCENILMDGVTITNSPFWTIHPFLSKDVVLRNLKVYAHGH--NNDGVDPEMS 264
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IE+ GDD +A+KSG ++ S I +R T + +A+GSE SGG
Sbjct: 265 QNVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCTVKNGHQLVAIGSELSGG 324
Query: 179 VENVLAEHINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
+ENV ++ + + H +KTN RGG+ VS++YM N G AG +G
Sbjct: 325 IENVFIDNCTVVDGAKLNHLLFIKTNERRGGY-----VSNIYMSNIVSGKIDAGILGIDT 379
Query: 236 DDKFN--------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
D + L + I + ++ T V+ I G K P I L N+ + V
Sbjct: 380 DVLYQWRDLVPTIERRLTPIKNIYLDNIKATNVKFISKISGQKELPVENIFLKNVTVDVV 439
Query: 288 AG 289
G
Sbjct: 440 QG 441
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 30 ISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
++ GE G+I+G + WW + F RP ++ R+I + + F +SP W IH
Sbjct: 193 VNLYGE-GSINGAASHENWWKNEKVMVGAF-RPRMLSLNRCRNIRVQGLYFHDSPAWVIH 250
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P + ++ + + PA SPNTDG+DP+S +V I S GDD +AVKSG G
Sbjct: 251 PYFSDELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMGRR 310
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG-- 205
Y PSS I + + + VGSE +GGV N++ E Y+ G+ +KT GRG
Sbjct: 311 YKTPSSNIHVYQCLMEHGHGAVTVGSEMAGGVNNLIVEKCRFYHTDRGLRIKTRRGRGKD 370
Query: 206 GFIRNITVSDVYMEN 220
+ NI D+ ME
Sbjct: 371 AILDNIIFRDLMMEQ 385
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIRDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGGVIENIRVENLNM 308
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGGVIENIRVENLNM 308
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 6/197 (3%)
Query: 29 KISFIGENGTIDGQ-GAIWWNMWRQRTLPFT--RPNLIEFMNSRSIIISNVIFQNSPFWN 85
K + I G IDG G N W + + T RP +I R + + + +NSP WN
Sbjct: 190 KEAVIYGQGIIDGNAGTGEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWN 249
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHP + ++ + +L+P DSPNTDG+DP+S +V I S GDD +AVKSG G
Sbjct: 250 IHPYFSDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAVKSGKIYMG 309
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
Y PS I+IRR + +GSE +GGV+++ + + G+ +KT GRG
Sbjct: 310 STYKCPSKNISIRRCCMRDGHGSVTIGSEMAGGVKDLTVKDCMFLHTDRGLRIKTRRGRG 369
Query: 206 GFIRNITVSDVYMENAR 222
++ V + E+ R
Sbjct: 370 ---KDAVVDKIVFEHIR 383
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 20/278 (7%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
++ F RP ++ S+ +++ FQNSP WNIHP+ +V+IR +T+ P S N D
Sbjct: 220 EKMKDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGD 279
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S NV I ++ GDD + KSG D G G P+ + ++ G V
Sbjct: 280 GLDLESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKNNIVYHGHGGFTV 339
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIK 226
GSE SGG++NV + VG+ K+ GRGG + NI +S + M E R +
Sbjct: 340 GSEMSGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINMINIPAEAIRFNMF 399
Query: 227 IAGDV-----GDHPDDKFNPNAL-------PVVNGITIKDVWGTKVQQSGLIQGLKNSPF 274
+G+ + +D+ L P I +KD+ T + GL
Sbjct: 400 YSGNAPVLEEDQNAEDEARKEELAPVTEETPSFRNIFMKDIQVTGSGVAAFFMGLPEMKL 459
Query: 275 TGICLSNINL---QGVAGPTSPPLKCSDVSGSAYQVKP 309
+ L N L +G+ + L+ +V+ S Q P
Sbjct: 460 QNVKLENAVLNAEKGITAIDAAGLELMNVNISGTQEIP 497
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGGVIENIRVENLNM 308
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGGVIENIRVENLNM 308
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 112 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 171
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 172 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 230
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 231 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 289
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 290 DCGIRMKSSKERGGVIENIRVENLNM 315
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ +GE GTIDGQGA+WW WR+ RP LI + +++I V
Sbjct: 130 IADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G I I T GI++GSE++GGV NVL E+ GI
Sbjct: 249 KAEKADPRFPDG-VVDNIYIANNTLKQ-GRGISIGSESAGGVNNVLVENNTFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-- 234
+K+ G+GG ++NI + M N K ++ G +G+
Sbjct: 307 IKSPRGKGGEVKNIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + IT++++ T + + I G +P +G SN+N++
Sbjct: 367 PPDSDPKQPFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADR 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ +GE GTIDGQGA+WW WR+ RP LI + +++I V
Sbjct: 130 IADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIYGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G I I T GI++GSE++GGV NVL E+ GI
Sbjct: 249 KAEKADPRFPEG-VVDNIYIANNTLKQG-RGISIGSESAGGVNNVLVENNTFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-- 234
+K+ G+GG ++NI + M N K ++ G +G+
Sbjct: 307 IKSPRGKGGEVKNIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + IT++++ T + + I G +P +G SN+N++
Sbjct: 367 PPDSDPKQPFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADR 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 139/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ G+ GTIDGQGA+WW WR+ RP LI +S ++++ V
Sbjct: 130 IADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSNNVLVDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V + IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + + GI++GSETSGGV NVL E+ GI
Sbjct: 249 KAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGGVNNVLVENNQFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+KT G+GG ++NIT + M + + A +G+
Sbjct: 307 IKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P+ F+ P + +TI+++ T K + + I G+ +P +G N+ +
Sbjct: 367 PPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADK 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 95 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 154
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 155 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 213
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 214 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 272
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 273 DCGIRMKSSKERGGVIENIRVENLNM 298
>gi|386336153|ref|YP_006032323.1| polygalacturonase [Ralstonia solanacearum Po82]
gi|334198603|gb|AEG71787.1| polygalacturonase [Ralstonia solanacearum Po82]
Length = 686
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 354 YLRPCMVEFIGCTNVLMETYRTHATPFWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 409
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ NV ED +TGDD +A+KSG AYG P+ I+ +S GI +GSE
Sbjct: 410 PDACDNVLCEDMTFNTGDDCIAIKSG-KNLDTAYG-PAQNHVIQDCIMNSGHGGITLGSE 467
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V +V + N G+ +
Sbjct: 468 MGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDNVTLPN---GVSL 524
Query: 228 AG 229
G
Sbjct: 525 TG 526
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 14/265 (5%)
Query: 30 ISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPV 89
I+ +GE G I+G A+ + P RP L+EF+N + + + + W+IHP
Sbjct: 148 IAIVGE-GKIEGNEAVAGRPTKDN--PLRRPALLEFINCDGVHLEGISTSYAHMWSIHPT 204
Query: 90 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 149
C N+V R +TI + N DGID DS +V I+ I++GDD +++KSG E
Sbjct: 205 CCDNLVFRNLTI--RSTKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMN 262
Query: 150 HPSSGITIRRVT-GSSPFSGIAVGSETSGGVENVLAEHINLYNV-GVGIHVKTNIGRGGF 207
P+ + I T F+ + +G+E+S G+ NV+ EH ++ +V I++K+ IGRG F
Sbjct: 263 RPTEDVRITNCTLEGRGFACLGIGTESSAGIRNVIIEHCHITSVYKYAIYIKSRIGRGAF 322
Query: 208 IRNITVSDVYMENARKG-IKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSG 264
I N+TV D+ R G ++I D P LP+ +++ +VQ +
Sbjct: 323 IENLTVRDMDAARMRMGFLRIDQTNAGIQDADPVPGLEGLPLFRNFRFENI---RVQDAP 379
Query: 265 LIQGLKNSPFTGICLSNINLQGVAG 289
++ N+ +G L + LQG++G
Sbjct: 380 VLVEAINTD-SGKMLDGLVLQGISG 403
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 139/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ G+ GTIDGQGA+WW WR+ RP LI +S ++++ V
Sbjct: 130 IADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V + IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + + GI++GSETSGGV NVL E+ GI
Sbjct: 249 KAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGGVNNVLVENNQFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+KT G+GG ++NIT + M + + A +G+
Sbjct: 307 IKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P+ F+ P + +TI+++ T K + + I G+ +P +G N+ +
Sbjct: 367 PPDTDPEQLFDQYKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADK 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 17/267 (6%)
Query: 33 IGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 90
I G IDG GA WW ++ RP + + +S + +NSP W IHP+
Sbjct: 193 IAGKGVIDGAGAEGDWWEWPKETREGARRPRTVFANRCTQLKMSGLTVRNSPSWTIHPLD 252
Query: 91 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG--WDEYGIAY 148
C+ V + I P DSPNTDG++P+SS+++ I S GDD +A+K+G W + +
Sbjct: 253 CAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRFSVGDDCIAIKAGKIWPDGTVPA 312
Query: 149 GHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 208
P+ +++R G+ +GSE SG V +V + + G+ +KT GRGG +
Sbjct: 313 --PTRNVSVRHCLMERGHGGVVIGSEMSGSVTDVTVAFCTMRDTDRGLRIKTRRGRGGAV 370
Query: 209 RNITVSDVYMENARKGIKIAGDVGDHPDDKFNP----------NALPVVNGITIKDVWGT 258
I +SD M+ + + I PD + + A P + I +
Sbjct: 371 ARIVLSDCLMDGVKTPLSINSHYFCDPDGRSDAVQNRAPAPVSAATPKIGDIRFERTEVK 430
Query: 259 KVQQS-GLIQGLKNSPFTGICLSNINL 284
+ + GL +P +G+ ++++++
Sbjct: 431 NAHHALAYVLGLAEAPVSGLTIADVSV 457
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 139/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ G+ GTIDGQGA+WW WR+ RP LI +S ++++ V
Sbjct: 130 IADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V + IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + + GI++GSETSGGV NVL E+ GI
Sbjct: 249 KAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGGVNNVLVENNQFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+KT G+GG ++NIT + M + + A +G+
Sbjct: 307 IKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P+ F+ P + +TI+++ T K + + I G+ +P +G N+ +
Sbjct: 367 PPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADK 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 120/238 (50%), Gaps = 5/238 (2%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP+ I FMN++++++ +V +P + +H +Y N +R V I P+ + I DSS
Sbjct: 203 RPSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNVMIQT-YPGPHANAIVADSS 261
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
V I DSYI TGDD + +KSG D GI P+ +TI T + +GSET+G
Sbjct: 262 RFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTVHHAHGAVVIGSETAGS 321
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD--VGDHPD 236
+ +V+A +I + GI +K+ GRGG + ++ + MEN GI + +G D
Sbjct: 322 IRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMGGESD 381
Query: 237 DKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 292
K P P I I +V ++ I GL P TG+ L+++ G G T+
Sbjct: 382 TKEEPVSERTPKFRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTDVAGSGKVGLTA 439
>gi|115359649|ref|YP_776787.1| glycoside hydrolase family protein [Burkholderia ambifaria AMMD]
gi|115284937|gb|ABI90453.1| glycoside hydrolase, family 28 [Burkholderia ambifaria AMMD]
Length = 665
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ + QN+PFW HP NVV+R VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTNS--IGPNNDGFDPD 390
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ ++V E +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCERCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRDCTMNSGHGGITLGS 445
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 502
Query: 227 IAG 229
+ G
Sbjct: 503 LKG 505
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGGVIENIRVENLNM 308
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 11/173 (6%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F S+ I++ + +NSPFW IHP S+V+IR V + A N DG+DP+ S
Sbjct: 204 RPQFIQFNRSKHILLEGIAIENSPFWVIHPYLSSDVIIREVNVFAHGH--NNDGVDPEMS 261
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IE+ GDD +AVK+G ++ P I IR + + +A+GSE SGG
Sbjct: 262 QNVLIENCVFDQGDDAIAVKAGRNQDAWRLNTPVKNIVIRDCSVKNGHQLLAIGSELSGG 321
Query: 179 VENV------LAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 225
VENV +A + L ++ + +KTN RGG+++NI + D+ KGI
Sbjct: 322 VENVYMGNCEVAPNAKLNHL---LFIKTNERRGGYVKNIYMEDIKAGRIDKGI 371
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 17/252 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ + +++ FQNSP WNIHP+ NVVIR + + P S N DG+D +
Sbjct: 231 FLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQNGDGLDLE 290
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N + ++ GDD + KSG ++ G G P+ + ++ T G VGSE S
Sbjct: 291 SCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNNTVYHAHGGFVVGSEMS 350
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIK--------- 226
GGV NV + VG+ K+ GRGG + NI +SD+ M N I+
Sbjct: 351 GGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDMINIPTDAIRFNMFYGGNS 410
Query: 227 -IAGDVGDHPDDKFNPNALPVV------NGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 279
+ + D D+ + +PV I +K++ T + GL + L
Sbjct: 411 PVLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATGSGTAAFFMGLPEKSLENVRL 470
Query: 280 SNINLQGVAGPT 291
N L+ G T
Sbjct: 471 ENALLEAKNGIT 482
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 105 LIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 165 IRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSRKRGGVIENIRVENLNM 308
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 22/244 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN IE +++I + N+PFW +HP+ N+++ V I + PN DG+DP+
Sbjct: 232 YLRPNFIEPFECENVLIQGITIINAPFWILHPIKSKNIIVDGVNIRS--HGPNNDGLDPE 289
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I++S +TGDD +A+K+G DE G G + I +R G+ +GSE S
Sbjct: 290 YSQNVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCKMIDGHGGVVIGSEMS 349
Query: 177 GGVENVLA--EHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAG 229
GV NV H++ + I +KTN RGG +++N+TV +V + I
Sbjct: 350 AGVRNVFVYNNHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEV----KEAVLHITM 405
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQ 285
+ D+ + N P + I ++DV KV+ G GL+NS I N+ +
Sbjct: 406 NYKDYKNR--TGNFTPQIRNILLEDV---KVKNGGKYAIFADGLENSKIQNITFKNVTID 460
Query: 286 GVAG 289
V
Sbjct: 461 KVKA 464
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 7/232 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +D +S
Sbjct: 238 RPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESC 297
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV + + + GDD + +KSG DE G G P + I+ T G +GSE SGG
Sbjct: 298 KNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFVIGSEMSGG 357
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGDVGDHP 235
V NV + VG+ K+ GRGG + NI + ++ M N + + V D P
Sbjct: 358 VRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMDLYYAVNDSP 417
Query: 236 DDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
+ P+ PV I I +V ++ GL P I + N+ +
Sbjct: 418 ETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNILIKNMTV 468
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 6/228 (2%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP+ + M SR+++I + F SP W IH +Y NVV+R V I+ +TDGI DSS
Sbjct: 187 RPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDV-IIETYPGVHTDGIAVDSS 245
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I + YI TGDD + +K+G D G+ P+ ++I + + +GSETSG
Sbjct: 246 RNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAVTIGSETSGW 305
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV---GDHP 235
V N++A +I +G+ +K+ GRGG + ++ + MEN + I G+ P
Sbjct: 306 VRNLVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKP 365
Query: 236 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ P N PV I I ++ + + I+GL + + +S+
Sbjct: 366 ANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEGLPEMNVSNLRISD 413
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 105 LIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 165 IRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSRERGGVIENIRVENLNM 308
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 112 LIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVV 171
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 172 IRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 230
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S G+ +V I+ +
Sbjct: 231 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGISDVYIHDIDFFQS 289
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 290 DCGIRMKSSRERGGVIENIRVENLNM 315
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 105 LIEGKGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 165 IRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSRERGGVIENIRVENLNM 308
>gi|172064462|ref|YP_001812113.1| glycoside hydrolase family protein [Burkholderia ambifaria MC40-6]
gi|171996979|gb|ACB67897.1| glycoside hydrolase family 28 [Burkholderia ambifaria MC40-6]
Length = 664
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++EF+ ++++ + QN+PFW HP NVV+R VT + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTN--SIGPNNDGFDPD 389
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
+ + V E +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 390 ACTAVLCEGCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRDCTMNSGHGGITLGS 444
Query: 174 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 226
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 445 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 501
Query: 227 IAG 229
+ G
Sbjct: 502 LKG 504
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP++++F S +++ V ++P W H +Y ++ +R VT+ PN DG+ D
Sbjct: 204 YLRPSMLQFYESSDVLVEGVTIVDAPMWVNHFIYSDDITVRDVTV--KTHRPNNDGVAID 261
Query: 117 SSSNVCIEDS-YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
SSS+V +E++ + GDD V VKSG DE G G PS I +R S G A+GSE
Sbjct: 262 SSSDVLVENNDFQGIGDDCVVVKSGRDEDGRRVGRPSENIVVRGNRMSGTEGGFAIGSEM 321
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV---- 231
SGGV V E + +G +++K N+ RGG + + + D+ + A K ++ D
Sbjct: 322 SGGVNTVFVERNTMDTIGSALYIKANLDRGGVVERVRIRDITVGTAEKVLRFQTDYSGYQ 381
Query: 232 -GDHP 235
G+HP
Sbjct: 382 GGNHP 386
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 125/245 (51%), Gaps = 26/245 (10%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+ S++I+I +V NSPFW I+PV C N+ + + + + N DG+DP+S
Sbjct: 241 RPPFIQPYKSKNILIKDVKIINSPFWEINPVLCENIKVDNIKV--GTNLYNNDGVDPESC 298
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
++ IE+ Y TGDD +A+KSG + G G P+ + IR GI +GSE SGG
Sbjct: 299 KDMIIENCYFLTGDDCIAIKSGRNNEGRNIGVPTENVIIRYNEFKDGHGGITIGSEISGG 358
Query: 179 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA------G 229
V ++ A H N ++ + I KTN RGG + NI V + + ++ + A G
Sbjct: 359 VNDIFA-HDNYFDSKELDYPIRFKTNAERGGKLENIYVKNSTVNKSKIAVIHADFFYEEG 417
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNINL 284
GDH P++ IT++++ + + + I+G +++P I + + L
Sbjct: 418 TNGDHK---------PILRNITLENIKTVEGGSIDAKNALYIKGFEHAPIENIVIEDAIL 468
Query: 285 QGVAG 289
GV G
Sbjct: 469 NGVNG 473
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ G+ GTIDGQGA+WW WR+ RP LI +S ++++ V
Sbjct: 130 IADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP ++I Y +V + IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + + GI++GSETSGGV NVL E+ GI
Sbjct: 249 KAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGGVNNVLVENNQFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+KT G+GG ++NIT + M + + A +G+
Sbjct: 307 IKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + +TI+++ T K + + I G+ +P +G N+ +
Sbjct: 367 PPDTDPAQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADK 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 105 LIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKVLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 165 IRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSRERGGVIENIRVENLNM 308
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 123/237 (51%), Gaps = 12/237 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN IEF + ++ ++ NSPFW +HP+ +N++I VT+ + PN DG DP+
Sbjct: 233 YLRPNFIEFFECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTV--NSHGPNNDGCDPE 290
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N+ I + +TGDD +A+K+G D G PS I ++ G+ +GSE S
Sbjct: 291 YSQNILIRNCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCKMIDGHGGVVIGSEIS 350
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
GV NV E+ ++ N+ I +KTN RGG I NI V ++ + ++ + + ++ +
Sbjct: 351 AGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECV-LKLNMFYN 409
Query: 235 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLI----QGLKNSPFTGICLSNINLQGV 287
N +P + +++++V V+ G +G SP I L N+ +Q V
Sbjct: 410 VYGSQTGNFIPTIRNVSLENV---TVKNGGKYSVWAEGYAESPVENITLKNVKIQKV 463
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 105 LIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLCWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 165 IRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSRERGGVIENIRVENLNM 308
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 8/254 (3%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G +GQ I W + RP ++ + S+ I++ V F+NSP W IHP+ C ++ +
Sbjct: 217 GQNNGQKEITDEEWTYMK-SWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTL 275
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
V + P S N D +D +S NV + + + GDD + +KSG DE G G P +
Sbjct: 276 NDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVI 335
Query: 157 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 216
I+ T G +GSE SGGV NV + VG+ K+ GRGG + NI + ++
Sbjct: 336 IKNNTVLHGHGGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNI 395
Query: 217 YM---ENARKGIKIAGDVGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLK 270
M N + + V D P+ P+ PV I I +V ++ GL
Sbjct: 396 NMIDIPNDALTMDLYYAVNDSPETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLP 454
Query: 271 NSPFTGICLSNINL 284
P I + N+ +
Sbjct: 455 EMPLKNIFIKNMTV 468
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 36 NGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNV 76
+GTIDGQGA+WW+ + QR L + RP + S + +S
Sbjct: 117 SGTIDGQGAVWWHKFWGTDENGGMLADYSQRGLRWVVDYDCQRPRNLVVYRSEQVEMSGF 176
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
+ S FWNIH Y ++ + ++ + + P+TDGID DSS V +E +S DD +
Sbjct: 177 TSRESGFWNIHLCYSQHLYLHHLQV-ENSGGPSTDGIDIDSSQQVRVEHCRVSCNDDNIC 235
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VK+G G + I IR SGI +GSETSGG+E VL E+I GVG
Sbjct: 236 VKAGRGAEAERIGATARDIVIRECELLHG-SGITLGSETSGGIEQVLIENITFSGTGVGF 294
Query: 197 HVKTNIGRGGFIRNITVSDVYMEN 220
+K+ RGGFIR++ VS + M +
Sbjct: 295 RIKSARNRGGFIRHVRVSGLQMTD 318
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E ++ IGE GTIDG + WW+ + + + + RP I ++++I + +NSP W
Sbjct: 191 ENVNIIGE-GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKNSPSWT 248
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHP+ N+ + I P D+PNTDG+DP+S +V I + S GDD +A+KSG
Sbjct: 249 IHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATS 308
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
S + IR + +GSE SGGV+NV + GI +KT GRG
Sbjct: 309 RKLPVSSENLYIRNCLMEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRG 368
Query: 206 --GFIRNITVSDVYMENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGITIK 253
G I I S++ M+ I D + ++ LPV + I +K
Sbjct: 369 STGIIDEIHASNIKMDKVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYIGNIYLK 428
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQ 285
D+ Q +G + GL + + NI ++
Sbjct: 429 DITCNDTQVAAGYMYGLPERKIEKVTMENIYIK 461
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 116/235 (49%), Gaps = 8/235 (3%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I ++I++ SPFW IHP+ NV I+ V + + PN DG DP+S
Sbjct: 176 RPQFINLYKCKNILLEGFTINRSPFWLIHPLLSENVTIKGVKM--QSHGPNNDGCDPESC 233
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IED TGDD +A+KSG DE G + P I +R +G+A+GSE +GG
Sbjct: 234 ENVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECRMKDGHAGVAIGSEITGG 293
Query: 179 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 236
NV E+ + + + I +K+N RGG + N+ V ++ + ++ I H D
Sbjct: 294 CHNVWVENCRMDSPELDRIIRIKSNPMRGGNVANVFVRNITVGECKQSILGIEQKYWHVD 353
Query: 237 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGVAGP 290
+ P LP+ I ++++ K Q + G + S I L + + +GV P
Sbjct: 354 E--GP-YLPLFENIHLENITSKKSQYVLHLDGFDDKSQIRNIYLKDCSFEGVEKP 405
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 103/208 (49%), Gaps = 25/208 (12%)
Query: 37 GTIDGQGAIWWN-MWRQRTL------------------PFTRPNLIEFMNSRSIIISNVI 77
GTIDGQG WWN W + L RP I NS + + ++
Sbjct: 109 GTIDGQGFYWWNKYWGEDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNSSQVTLRDLT 168
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLV 135
+ SPFWN+H Y ++V YV+ L D+ P+TDGID DSS NV IE+ I DD +
Sbjct: 169 LRRSPFWNVHICYSTDV---YVSGLVIKDNEGPSTDGIDVDSSRNVLIENCNIECNDDNI 225
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+K+G D G+ PS I +R + S +G+ +GSETSG + NV I G
Sbjct: 226 CIKAGRDADGLRVNRPSENIVVRNCSIGSG-AGVTIGSETSGSIRNVEIYQIKANGTDGG 284
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARK 223
+K+ + RGG I NI V D M N +
Sbjct: 285 FRIKSALTRGGVIENIRVHDFEMVNVLR 312
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 145/331 (43%), Gaps = 66/331 (19%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIW-WNMWRQRTLP------------ 56
W + + S F+ + E+ + GT+DGQ + W W + + P
Sbjct: 141 WEGTECYNY-SPFIYAYGERNVAVTGPGTLDGQARLGPWESWYRTSGPQGPDQSLLRRMG 199
Query: 57 ---------------FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 101
+ RP +++F R++++S + + P W +HPV +NV +R +T+
Sbjct: 200 SAGVPVAERVFGDGHYLRPKMVQFYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITV 259
Query: 102 LAPADSP--NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR 159
DS NTDG DP+ S+V I +T DD VAVKSG DE G G PS I +R
Sbjct: 260 ----DSTLYNTDGCDPECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRD 315
Query: 160 VTGSSPFSGIAVGSETSGGVENVLAEHINL--------YNVGVGIHVKTNIGRGG----- 206
S + G+ VGSE SGGV ++ AE+ + Y V ++VK + RGG
Sbjct: 316 CRFSGRWGGMTVGSEMSGGVRDIFAENCEINSPDFPGRYPVKHALYVKASKKRGGCIDGV 375
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL- 265
IRN T +V E + G G LPV +++++ +++ G
Sbjct: 376 HIRNFTGQNVEREAVFVNMNYNGGEG---------GTLPV----SVRNIHMDRMEIDGAR 422
Query: 266 ----IQGLKNSPFTGICLSNINLQGVAGPTS 292
+ GL+ G+ LS G+ P S
Sbjct: 423 AVLQLVGLETDHLRGVSLSRSTFTGILNPDS 453
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 81 LIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVV 140
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 141 IRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 199
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S G+ +V I+ +
Sbjct: 200 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGISDVYIHDIDFFQS 258
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 259 DCGIRMKSSRERGGVIENIRVENLNM 284
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 81 LIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVV 140
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 141 IRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 199
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S GV +V I+ +
Sbjct: 200 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 258
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 259 DCGIRMKSSRERGGVIENIRVENLNM 284
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P
Sbjct: 227 WNEIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWY 282
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I ++ GDD + +KSG DE G G P + ++ T
Sbjct: 283 SQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGH 342
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 343 GGFVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W+ R + RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P
Sbjct: 233 WDYMRD----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWY 288
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S + I ++ GDD + +KSG DE G G P + + T
Sbjct: 289 SQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGH 348
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
G VGSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW---RQRT----------------LPFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q++ RP ++ ++
Sbjct: 81 LIEGKGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVV 140
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS++V I + ++ GD
Sbjct: 141 IRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGD 199
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I I R S + G+ +GSE S GV +V I+ +
Sbjct: 200 DCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 258
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 259 DCGIRMKSSRERGGVIENIRVENLNM 284
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN++ N R +++ N FQNSP WN+H +YC + + V + + N DG+D +
Sbjct: 208 YLRPNMVVLRNCRKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDIE 267
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S S V +++S + GDD + +KSG DE G G S I I G +GSE S
Sbjct: 268 SCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNVVYKAHGGFVIGSEMS 327
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GG ++ + + VG+ KT GRGG + NI + ++ M +
Sbjct: 328 GGAHDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRD 371
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ G+ GTIDGQGA+WW WR+ RP LI +S ++++ V
Sbjct: 130 IADAQNVAITGQ-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V + IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + + GI++GSETSGGV NVL E+ GI
Sbjct: 249 KAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGGVNNVLVENNQFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+KT G+GG ++NIT + M + + A +G+
Sbjct: 307 IKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + +TI+++ T K + + I G+ +P +G N+ +
Sbjct: 367 PPDTDPAQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADK 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P
Sbjct: 245 WNEIR----PWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWY 300
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I ++ GDD + +KSG DE G G P + ++ T
Sbjct: 301 SQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGH 360
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 361 GGFVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 412
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP ++F ++I V + SPFW +HPV C NVV+R V I PN DG DP+
Sbjct: 228 YLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNVVVRGVDIHGLG--PNNDGCDPE 285
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S + IE TGDD +AV SG + G P+ I IR G+ VGS+ S
Sbjct: 286 SVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIVIRDCRMKEGHGGVVVGSQIS 345
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKIAGDVGD 233
GG ++ AE + ++ I K N RGG + + D+ + + +R I + +
Sbjct: 346 GGARHIYAERCTMDSPDLWYAIRFKNNALRGGLLEHFYFRDLTVGQVSRAAITCDFNYEE 405
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT-- 291
D F PV+ I ++ + + + QGL +P + + + GV P+
Sbjct: 406 GADGPFK----PVLRDILVQRMTVARAARVLDSQGLPGAPVGTVRIEDSRFDGVTHPSIL 461
Query: 292 --SPPLKCSDV 300
SP ++ S V
Sbjct: 462 AHSPDIRLSRV 472
>gi|445494990|ref|ZP_21462034.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791151|gb|ELX12698.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 615
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 97/171 (56%), Gaps = 11/171 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP +I+ + ++++ ++PFW HPV+C N+VIR + + PN+DG DP+
Sbjct: 303 YLRPPMIQLIGCTNVLLQGYHVTHTPFWQHHPVHCRNIVIR--NVHCESLGPNSDGFDPE 360
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
+ +V I+ TGDD +A+K+G D YG PS I I+ T S + +GSE +
Sbjct: 361 ACDHVLIDGCTFDTGDDCIAIKAGKD-LDTQYG-PSQNIVIQNCTMQSGHGAVTLGSEMA 418
Query: 177 GGVENVLAEHINLYNV-------GVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GG++NV A+++ N+ I +KTN+ RGG++RN V D+ + N
Sbjct: 419 GGIQNVYAQNLVFQNINWATNPLNTAIRLKTNLNRGGYLRNFYVRDISIPN 469
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 21/199 (10%)
Query: 39 IDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSIIISNVIFQ 79
IDGQG WW ++ Q+ L RP ++ +++ ++IFQ
Sbjct: 112 IDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQ 171
Query: 80 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 139
S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GDD +A+KS
Sbjct: 172 KSGFWNLQITYSNDVLVEKV-IICNNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKS 230
Query: 140 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVK 199
G D G SS I + R S + G+ +GSE S GV +V I+ + GI +K
Sbjct: 231 GRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMK 289
Query: 200 TNIGRGGFIRNITVSDVYM 218
++ RGG I NI V ++ M
Sbjct: 290 SSKERGGVIENIRVENLNM 308
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W+ R + RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P
Sbjct: 233 WDYMRD----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWY 288
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S + I ++ GDD + +KSG DE G G P + + T
Sbjct: 289 SQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGH 348
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
G VGSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W+ R + RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P
Sbjct: 233 WDYMRD----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWY 288
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S + I ++ GDD + +KSG DE G G P + + T
Sbjct: 289 SQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGH 348
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
G VGSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W+ R + RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P
Sbjct: 233 WDYMRD----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWY 288
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S + I ++ GDD + +KSG DE G G P + + T
Sbjct: 289 SQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGH 348
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
G VGSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 14/239 (5%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+ + +I+I ++ NSPFW ++PV C N+ + + I + N DG+DP+S
Sbjct: 238 RPPFIQPYKTNNILIRDITILNSPFWEVNPVLCENIKVSGIRI--DTNLYNNDGVDPESC 295
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
++ IE+ Y TGDD +A+KSG + G G P+S I IR GI +GSE SGG
Sbjct: 296 KDMIIENCYFLTGDDCIAIKSGRNNEGRNIGIPTSNIIIRNNEFKDGHGGITIGSEISGG 355
Query: 179 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
V N+ H N ++ + I KTN RGG + NI + + + ++ + I D
Sbjct: 356 VNNIFG-HDNYFDSEELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAV-IHADF--FY 411
Query: 236 DDKFNPNALPVVNGIT---IKDVWGTKV--QQSGLIQGLKNSPFTGICLSNINLQGVAG 289
++ N N P++ I IK V G + + + ++G +++P I + + L GV G
Sbjct: 412 EEGTNGNHKPILRNIALSNIKTVDGGSIDAKNALYLKGFEDAPIENILIEDALLNGVKG 470
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W+ R + RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P
Sbjct: 233 WDYMRD----WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWY 288
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S + I ++ GDD + +KSG DE G G P + + T
Sbjct: 289 SQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGH 348
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
G VGSE SGGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 10/259 (3%)
Query: 50 WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
W QR R L+ F+ S I+I ++ NSPFW IHP+ N+ + + D
Sbjct: 198 WDQRKFGMGKGLRSQLVNFVESDGILIKDLHLVNSPFWVIHPLLSKNITVD--GVFVQND 255
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
PN DG DP++ V I++ TGDD +A+KSG + G + PS I IR +
Sbjct: 256 GPNGDGCDPEACDGVLIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCKMADGH 315
Query: 167 SGIAVGSETSGGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
G+ +GSE SGG NV AE +++ ++ + +KTN RGG I NI + +V + +
Sbjct: 316 GGVVIGSEISGGCRNVFAEDCYMDSPHLDRVLRIKTNNCRGGLIENINMRNVTVGQCNEA 375
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNIN 283
+ + ++ P ++ P V + +++V + + I GL N I + N
Sbjct: 376 V-LRINLDYEPREECYRGFEPTVRKVYMENVTSKESKYGVQIIGLNNIENVYDITVKNCK 434
Query: 284 LQGVA-GPTSPPLKCSDVS 301
GV+ P S K D+
Sbjct: 435 FDGVSKAPVSISGKTRDIK 453
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 18/280 (6%)
Query: 36 NGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G +D Q WW + R + + RP LI + +I+ + +NSP W +HP++
Sbjct: 193 RGVMDAQAGFDTWWERPKARFIGW-RPRLIFMVECEQVILQGMTLKNSPSWTVHPLFSRG 251
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
+ + I APADSPNTDG++P+SS+++ I + GDD +A+KSG P+
Sbjct: 252 LTFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSGKISMARRSVRPTR 311
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNI 211
+ I + +GSE + GV ++ + N GI +KT GRG IR +
Sbjct: 312 RVRISNCRMKDGHGAVVIGSEMACGVYDISVQTCLFINTDRGIRLKTRRGRGREAVIRGL 371
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDK------FNPNAL----PVVNGITIKDVWGTKVQ 261
+ ME I PD K NP + P + I + + V+
Sbjct: 372 NCRHIRMEGVGSAFVINSFYWCDPDGKTDEVADRNPRPVDEGTPSIGDIRLSHIDAIGVR 431
Query: 262 QSGL-IQGLKNSPFTGICLSNINLQ--GVAGPTSPPLKCS 298
+GL + GL P G+ L +I L+ A P P + S
Sbjct: 432 HAGLYVLGLPEQPVDGLTLDHIRLRFDPQAKPGEPDMAAS 471
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 32/300 (10%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
E I +G+ G I G AI + +R F P L+EF++ R++ + + + W+IH
Sbjct: 153 ENIGIVGK-GKIVGNTAIKGRV--ERATQFRNPALLEFVSCRNVRVEDCFTSQNDMWSIH 209
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P YC N+ + VT+ + A DGID DS +V I+ T DD +++KSG E G
Sbjct: 210 PTYCENITFKNVTVHSGA-----DGIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYT 264
Query: 148 YGHPSSGITIRRVTGSSPF-SGIAVGSETSGGVENVLAEHINLYNVGV-GIHVKTNIGRG 205
P+ + I T F + I +GSETSGG+ NV H I++K+ GRG
Sbjct: 265 ILRPTEDVQISNCTFMDHFWACIGIGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRG 324
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF---NPNALPVV-----NGITIKD--- 254
FI +I+++D+ + A++G + D+F +P + + I + D
Sbjct: 325 AFIEDISMNDLEVSGAKQGFLRFNILDSGKQDEFPVPGEEGIPTIRNFHFSNIRVTDMPV 384
Query: 255 -VWGTKVQQSGLIQGLKNSPFTGICLSNINLQG----------VAGPTSPPLKCSDVSGS 303
V G + S ++G + TG C I+L V G T P L +V+G+
Sbjct: 385 LVDGVGIHPSKPLEGFSLTNVTGTCGKGISLANIKHAVVRDIKVTGFTGPLLSAHNVTGT 444
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 36 NGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNV 76
+GT+DGQGA+WW+ + +R L + RP + S + + +
Sbjct: 105 SGTLDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDF 164
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
++S FWN+H Y V ++ + ++ A P+TDGID DSS V +E +S DD +
Sbjct: 165 TSKDSGFWNLHVCYSKQVNLQRLNVM-NATGPSTDGIDIDSSQLVRVEGCTVSCNDDNIC 223
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSG + I IR T SGI +GSETSGG+ENV+ EH GVG
Sbjct: 224 VKSGRGAEAQQLARTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGF 282
Query: 197 HVKTNIGRGGFIRNITVSDVYMEN 220
+K+ RGG+I+NI V + ME+
Sbjct: 283 RIKSARNRGGWIKNIIVRHLIMED 306
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E ++ IGE GTIDG + WW+ + + + + RP I ++++I + +NSP W
Sbjct: 191 ENVNIIGE-GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKNSPSWT 248
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHP+ N+ + I P D+PNTDG+DP+S +V I + S GDD +A+KSG
Sbjct: 249 IHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATS 308
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
S + IR + +GSE SGGV+NV + GI +KT GRG
Sbjct: 309 RKLPVSSENLYIRNCLMEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRG 368
Query: 206 --GFIRNITVSDVYMENARKGIKIAGDVGDHPDDK----FNPNALPV------VNGITIK 253
G I I S++ M+ I D K ++ LPV + I +K
Sbjct: 369 STGIIDEIHASNIKMDKVLTPFTINSFYFCDEDGKTEYVWSKEKLPVDDRTPYIGNIYLK 428
Query: 254 DVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQ 285
D+ Q +G + GL + + NI ++
Sbjct: 429 DITCNDTQVAAGYMYGLPERKIEKVTMENIYIK 461
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID D S+NV + + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDYSTNVRVYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RGG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGGVIENIRVENLNM 308
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN++ + I++S FQNSP W +H + C ++ ++ V + P ++ N D ID +
Sbjct: 221 YFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWNAQNGDAIDVE 280
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV +E+S GDD + +KSG DE G G P+ + +R G +GSE S
Sbjct: 281 SCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRAHGGFVIGSEMS 340
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GG N+ +G+ KT GRGG + NI + ++ M +
Sbjct: 341 GGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRD 384
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 142/321 (44%), Gaps = 65/321 (20%)
Query: 20 SDFLISKFEKISFIGENGTIDGQGAIW-WNMWRQRTLP---------------------- 56
S F+ + E+ + GT+DGQ + W W + + P
Sbjct: 106 SPFIYAYGERNVAVTGPGTLDGQARLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERV 165
Query: 57 -----FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--N 109
+ RP +++F R++++S + + P W +HPV +NV +R +T+ DS N
Sbjct: 166 FGDGHYLRPKMVQFYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITV----DSTLYN 221
Query: 110 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 169
TDG DP+ S+V I +T DD VAVKSG DE G G PS I +R S + G+
Sbjct: 222 TDGCDPECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSGRWGGM 281
Query: 170 AVGSETSGGVENVLAEHINL--------YNVGVGIHVKTNIGRGGF-----IRNITVSDV 216
VGSE SGGV +V AE+ + Y V ++VK + RGG+ IRN T V
Sbjct: 282 TVGSEMSGGVRDVFAENCEINSPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSV 341
Query: 217 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKN 271
+ + G G LPV +++++ +++ G + GL+
Sbjct: 342 ERDAVFVNMNYNGGEG---------GTLPV----SVRNIHMDRMEIDGARAVLQLVGLET 388
Query: 272 SPFTGICLSNINLQGVAGPTS 292
G+ LS G+ P S
Sbjct: 389 DHLRGVSLSRSTFTGILSPDS 409
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 140/301 (46%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPF------TRPNLIEFMNSRSIIISNVI 77
I+ + ++ +GE GTIDGQGA+WW WR+ RP LI + +++I V
Sbjct: 130 IADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTDRPRLIYITRASNVLIDGVT 188
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+SP +++ Y +V I IL+P +PNTD IDP S N+ I ++YI DD +A+
Sbjct: 189 LTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G I I T GI++GSE++GGV NV E+ GI
Sbjct: 249 KAEKADPRFPDG-VVDNIYIANNTLKQ-GRGISIGSESAGGVNNVRVENNTFEGSMYGIR 306
Query: 198 VKTNIGRGGFIRNITVSDVYMENAR--------------------KGIKIAG-DVGDH-- 234
+K+ G+GG ++NI + M N K ++ G +G+
Sbjct: 307 IKSPRGKGGEVKNIVYRNTRMHNVEVPLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIY 366
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + IT++++ T + + I G +P +G SN+N++
Sbjct: 367 PPDSDPKQPFDKYKTPHFSNITVENLTSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADR 426
Query: 289 G 289
G
Sbjct: 427 G 427
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP L++ R ++ F+NSP WN+HP C +V IR V+I S N DG+D DS
Sbjct: 205 RPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDGLDLDSC 264
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
I DS GDD + +KSG D G A P+ +TIR G +GSE SG
Sbjct: 265 RYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQVFHGHGGFVIGSEMSGD 324
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 238
V N+ G+ K+ GRGG + I + V M+ K I ++
Sbjct: 325 VRNIAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYSGKNNT 384
Query: 239 FNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
+P A+ PV I D + I+GL P I + L G T
Sbjct: 385 DDPVAVTEETPVFRDFHISDTTCIGAHTALHIKGLPEMPIENIVFDRVQLTARNGAT 441
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 19/271 (7%)
Query: 33 IGENGTIDGQGAIWWNMWRQRTLPFT----------RPNLIEFMNSRSIIISNVIFQNSP 82
+ E+G + + + M ++ ++PF RP I ++I++ SP
Sbjct: 173 VQEDGKKINEKTLLYEM-KEDSIPFKERVFMRENGIRPQFINLYKCKNILLEGFTLNRSP 231
Query: 83 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 142
FW IHP+ N+ +R V + + N DG DP+S NV IED TGDD +A+KSG D
Sbjct: 232 FWLIHPLLSENITVRKVKM--QSHGYNNDGCDPESCRNVLIEDCDFDTGDDCIAIKSGRD 289
Query: 143 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG--IHVKT 200
E G + PS I +R +G+A+GSE +GG NV E+ + + + I +K+
Sbjct: 290 EDGRYWNIPSENIIVRHCRMKDGHAGVAIGSEVTGGCRNVWVENCTMDSPELDRIIRIKS 349
Query: 201 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 260
N RGG + NI + ++ + ++ I H DD P LP + I ++++ K
Sbjct: 350 NAMRGGEVENIFIRNIRVGECKESILGFELKYWHVDD--GP-YLPYFHNIHLENITSKKS 406
Query: 261 QQSGLIQGLKNS-PFTGICLSNINLQGVAGP 290
Q + G ++ I + + GV P
Sbjct: 407 QYVLHLDGFEDKIQAQDIFVKDCTFDGVMKP 437
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P
Sbjct: 227 WNEIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWY 282
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I ++ GDD + +KSG DE G G P + ++ T
Sbjct: 283 SQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTVLHGH 342
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 343 GGFVVGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 19/271 (7%)
Query: 33 IGENGTIDGQGAIWWNMWRQRTLPFT----------RPNLIEFMNSRSIIISNVIFQNSP 82
+ E+G + + + M ++ ++PF RP I ++I++ SP
Sbjct: 173 VQEDGKKINEKTLLYEM-KEDSIPFKERVFMRENGIRPQFINLYKCKNILLEGFTLNRSP 231
Query: 83 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 142
FW IHP+ N+ +R V + + N DG DP+S NV IED TGDD +A+KSG D
Sbjct: 232 FWLIHPLLSENITVRKVKM--QSHGYNNDGCDPESCRNVLIEDCDFDTGDDCIAIKSGRD 289
Query: 143 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG--IHVKT 200
E G + PS I +R +G+A+GSE +GG NV E+ + + + I +K+
Sbjct: 290 EDGRYWNIPSENIIVRHCRMKDGHAGVAIGSEVTGGCRNVWVENCTMDSPELDRIIRIKS 349
Query: 201 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 260
N RGG + NI + ++ + ++ I H DD P LP + I ++++ K
Sbjct: 350 NAMRGGEVENIFIRNIRVGECKESILGFELKYWHVDD--GP-YLPYFHNIHLENITSKKS 406
Query: 261 QQSGLIQGLKNS-PFTGICLSNINLQGVAGP 290
Q + G ++ I + + GV P
Sbjct: 407 QYVLHLDGFEDKIQARDIFVKDCTFDGVMKP 437
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 32 FIGENGTIDGQGAIWWNMW-------------RQRTL------PFTRPNLIEFMNSRSII 72
I G IDGQG WW ++ Q+ L RP ++ ++
Sbjct: 105 LIEGKGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVV 164
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GD
Sbjct: 165 VRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGD 223
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +A+KSG D G SS I + R S + G+ +GSE S GV +V I+ +
Sbjct: 224 DCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQS 282
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYM 218
GI +K++ RG I NI V ++ M
Sbjct: 283 DCGIRMKSSKERGEVIENIRVENLNM 308
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN++ ++III V FQNSP W +HP+ C ++ ++ V + P + N+D ID +
Sbjct: 457 FLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPWYAQNSDAIDLE 516
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N +E STGDD + +KSG DE G G P+ I+ G +GSE S
Sbjct: 517 SCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCIVYHAHGGFVIGSEMS 576
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GGV N+ VG+ KT GRGG + NI V+++ M + A+
Sbjct: 577 GGVRNMFISDCTFMGSDVGLRFKTARGRGGVVNNIYVNNINMTDIPGEAVLFDMYYAAKD 636
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
++ G + P K P P I+++ + + LI+GL + + N
Sbjct: 637 PVRADGKENELPVIKAEPLGEGTPQFKDFYIQNIVCKGAETAILIRGLPE-----MTIKN 691
Query: 282 INLQGVAGPTSPPLKCSDVS 301
IN++ + L C +
Sbjct: 692 INIENAMIEANKGLVCVEAE 711
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F S +I++ V NSPFW IH N+ +R + + A N DG+DP+ S
Sbjct: 217 RPQFIQFNRSENILLEGVSVVNSPFWTIHLYLSKNIRLRNLNVYAHGH--NNDGVDPEMS 274
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IE+ GDD +A+KSG + G PS I IR T + +A+GSE SGG
Sbjct: 275 QNVLIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCTVKNGHQLVAIGSELSGG 334
Query: 179 VENVLAEHINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
+ENV +H + + H +KTN GG+++NI Y N R G G +G
Sbjct: 335 IENVFIDHCTVLDGAKLNHLLFIKTNERMGGYVKNI-----YASNIRSGKIDLGILGIET 389
Query: 236 DDKFN--------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
D + L + I + ++ ++V+ + G K P + L N+
Sbjct: 390 DVLYQWRDLVPTYEKRLTPIKDIFLTNIHASEVKFIARVLGQKALPVETVSLKNV 444
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E ++ IG+ G IDG + WW + + + + RP + ++++I + +NSP W
Sbjct: 191 ENVNIIGD-GVIDGNSSFDTWWYDAKVKRIAW-RPRTVYLNKCKNVLIEGITIRNSPSWT 248
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHP+ N+ + I P D+PNTDG+DP+S +V I + S GDD +A+KSG
Sbjct: 249 IHPLMSQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAIKSGKLSVS 308
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
PS + IR + +GSE SGGV+NV E+ GI +KT GRG
Sbjct: 309 QKLPMPSENLYIRNCLMEYGHGAVVIGSEMSGGVKNVHVENCVFKKTDRGIRIKTRRGRG 368
Query: 206 --GFIRNITVSDVYME 219
G I I +++ ME
Sbjct: 369 KTGIIDEIHAANIKME 384
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 133/329 (40%), Gaps = 55/329 (16%)
Query: 31 SFIGENGTIDGQGAIW---------------------------WNMWRQRTLPFTRPNLI 63
S + G +D G+IW WN R P+ RP L+
Sbjct: 186 SLVSSGGVVDASGSIWYPTAGALKGAMATKDFNNPEGINTDEEWNEIR----PWLRPVLL 241
Query: 64 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 123
+ S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D +S N I
Sbjct: 242 NIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDLESCKNALI 301
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 183
++ GDD + +KSG DE G G P + ++ T G VGSE SGGV+NV
Sbjct: 302 VNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEMSGGVKNVY 361
Query: 184 AEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAGD-VGDHPDD 237
VG+ K+ GRGG +I NI + D+ E + G G+ +D
Sbjct: 362 VTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALLFDLFYGGKGAGEETED 421
Query: 238 KFN----------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL--- 284
P I I +V V ++ GL P + + ++ +
Sbjct: 422 DLEGRMKSSVPPVTEKTPAFRDIHITNVTCRSVGRAMFFNGLPEMPIRNVHVKDVVITDA 481
Query: 285 -QGVAGPTSPPLKCS----DVSGSAYQVK 308
QG+ + + D G+A QVK
Sbjct: 482 KQGIVISQAENVSIENVKIDTKGTALQVK 510
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 115/255 (45%), Gaps = 17/255 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
++ F RP ++ + +++ FQNSP WNIHP+ C +V IR +T+ P S N D
Sbjct: 233 EKIKDFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNGD 292
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S NV I ++ GDD + KSG DE G P+ + ++ G +
Sbjct: 293 GLDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYHGHGGFVI 352
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIK 226
GSE SGGV NV + VG+ K+ GRGG + NI +S++ M E R +
Sbjct: 353 GSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLF 412
Query: 227 IAG------DVGDH-PDDKFNPNA-----LPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 274
G D G+ PD + N A P I +K++ + GL
Sbjct: 413 YGGKSPVLDDGGNSVPDIQENEPAPVTEETPAFRNIFMKNIRANGFGNAAFFMGLPEMNL 472
Query: 275 TGICLSNINLQGVAG 289
+ L N L+ G
Sbjct: 473 QNVHLENALLRAAKG 487
>gi|16507076|gb|AAL24033.1|AF417111_1 PehC [Ralstonia solanacearum K60-1]
Length = 679
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 114
+ RP ++EF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 347 YLRPCMVEFIGCTNVLMETYRTHATPFWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 402
Query: 115 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 174
PD+ NV E +TGDD +A+KSG AYG P+ I+ +S GI +GSE
Sbjct: 403 PDACDNVLCEGMTFNTGDDCIAIKSG-KNLDTAYG-PAQNHVIQDCIMNSGHGGITLGSE 460
Query: 175 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V +V + N G+ +
Sbjct: 461 IGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFHVDNVTLPN---GVSL 517
Query: 228 AG 229
G
Sbjct: 518 TG 519
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 28 EKISFIGENGTIDG--QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E + IGE GT+DG Q WW + + + RP + + I++ + +NSP W
Sbjct: 190 EDVRIIGE-GTLDGNGQNGDWWINCKVKREAW-RPRSLYLLECHDILVEGITIKNSPSWT 247
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
+HP+ S + +T+ P DSPNTDGIDP+S + V I S GDD +A+KSG
Sbjct: 248 VHPIRSSKLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGKISIP 307
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
+ PS I IR + +GSE SGGV+NV E + G+ +KT GRG
Sbjct: 308 LKERRPSENIIIRNCLMQYGHGAVVLGSEMSGGVKNVFVERCFFEDTDRGLRIKTRRGRG 367
Query: 206 --GFIRNITVSDVYME 219
I I V ++ M+
Sbjct: 368 NTAIIDQIYVKNIQMK 383
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P
Sbjct: 227 WNEIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWY 282
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I ++ GDD + +KSG D+ G G P + ++ T
Sbjct: 283 SQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGH 342
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 343 GGFVVGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|225442916|ref|XP_002265133.1| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 374
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 146/294 (49%), Gaps = 24/294 (8%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS 81
L K + ++ G+ G+IDG+G+ WW +Q F RP ++F +++ + NS
Sbjct: 92 LLFHKVKGLTLWGK-GSIDGKGSAWW---QQHDSDF-RPAALKFYECPGMVLKGLTHLNS 146
Query: 82 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 141
+I C +I + ++AP DSPNTDGI+ SS NV ++ S+ISTGDD +A+ +G
Sbjct: 147 QKQHIVITKCHGALISKIKVIAPEDSPNTDGINIASSKNVRVQRSHISTGDDCIAISAG- 205
Query: 142 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG-----VENVLAEHINLYNVGVGI 196
SS I I+ +T +P GI++G+ G VE V G+G+
Sbjct: 206 ----------SSNIKIKGMT-CAPSHGISIGALGDPGKPDESVEKVDVSDCTFKGPGIGV 254
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
+KT G G +RNI+ ++ ++ I I K N +A+ V + ++ +
Sbjct: 255 RIKTWQGGRGRVRNISYKNIEVQEVGTPIVIDQFYCPRGGCKNNSDAVRVSD-VSYSGIR 313
Query: 257 GTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 309
GT + + + +N+ T I L NINL+ + + +KC +V G + VKP
Sbjct: 314 GTYTRDDAMSLLCSQNAACTNIVLDNINLRTMDPKKAAKVKCFNVKGRSQDVKP 367
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P
Sbjct: 227 WNEIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWY 282
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I ++ GDD + +KSG D+ G G P + ++ T
Sbjct: 283 SQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGH 342
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G VGSE SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 343 GGFVVGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 34 GENGTIDGQGAI--------WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
EN + G+G I WW+ +++ P RP ++ + + I + + F P W
Sbjct: 189 AENVNLYGKGEILGGASMEDWWSEENRQSSPH-RPRMLFLTHCKHIRVQGLRFSMCPSWC 247
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHP +CS++ I V I+ P DSPNTDGI+P+S +V I + S GDD +A+KSG
Sbjct: 248 IHPCFCSDLGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKGRRA 307
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
P S I IR+ + G+ +GSE S GV +V N G+ +KT GRG
Sbjct: 308 QENPVPGSHIQIRQCFMENGHGGVTIGSEISSGVHHVTVRDCCFRNTDRGLRIKTRRGRG 367
Query: 206 GFIRNITVSDVYMEN 220
++ V V EN
Sbjct: 368 ---KSCVVDAVLFEN 379
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P
Sbjct: 229 WNEIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWY 284
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I ++ GDD + +KSG DE G G P + ++ T
Sbjct: 285 SQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGH 344
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G VGSE SGGV+NV VG+ K+ GRGG + I + ++ M
Sbjct: 345 GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|299144965|ref|ZP_07038033.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|336412843|ref|ZP_08593196.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
gi|298515456|gb|EFI39337.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|335942889|gb|EGN04731.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
Length = 527
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N ++++ + + S FWNI P+YC NV+IR +T+ + P+ DGID +
Sbjct: 206 FYRPKTISPINCTNVLVEGITMERSAFWNICPIYCENVIIRGITVNS-IGVPSGDGIDIE 264
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE S ++ GDD +K+G E G+ G + + IR GI GSET+
Sbjct: 265 SCKNVLIEYSTLNCGDDCFTLKAGRAEDGLRVGKATENVVIRYSLAKDGHGGITCGSETA 324
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--------IA 228
GG+EN+ VGI KT R G + +I ++ M N + K
Sbjct: 325 GGIENIYLHDCVFDGTQVGIRFKTRRNRAGGVSDILYENIRMTNVGEAFKWDLLGSKRYM 384
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
G++ + PV+ I I++ + I G+ P + I + N
Sbjct: 385 GELASRIPPRAVNRLTPVIKDIKIRNFIVESAHKVLSINGIPEVPCSNILIEN 437
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 135/292 (46%), Gaps = 47/292 (16%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWR--------------QRTLP----------FTRPN 61
+ E +S IG+ G IDG + W+ + +P + RP+
Sbjct: 147 QLENVSIIGK-GVIDGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPH 205
Query: 62 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 121
L++F + ++I I +V N+PFW IH + N++ R I A N DGIDP+ + N+
Sbjct: 206 LVQFFDCKNITIEDVFITNAPFWCIHLLKSENIICR--GIRYDAKLVNNDGIDPEYTRNL 263
Query: 122 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 181
IE+ + GDD VA+K G D G PS I IR G+ +GSE S G+++
Sbjct: 264 LIENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCKFKG-LHGVVLGSEMSSGIQH 322
Query: 182 VLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD------- 233
V E+ GI +KTN RGGFIR D+Y+ N G+V D
Sbjct: 323 VFVENCTYGGYCKRGIFIKTNPDRGGFIR-----DIYVNNCE-----FGEVEDLFYVTSM 372
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 284
+ + + + V+ I +KD+ KV + L+ QG + P + N+++
Sbjct: 373 YAGEGMDNHHFTEVHDIYVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 424
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 118/255 (46%), Gaps = 24/255 (9%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R + RP L+ F+ + +++ V F+NSP W +HP+ C ++ I +++ P
Sbjct: 230 WNSIRD----WLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWY 285
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S + I++S GDD + +KSG DE G G P + IR
Sbjct: 286 SQNGDALDLESCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVVLHGH 345
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT-------------- 212
G VGSE SGGV+N+ ++ VG+ K+ GRGG + NI
Sbjct: 346 GGFVVGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGL 405
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTKVQQSGLIQGL 269
+ D++ G GD ++P ++ P P I IK+V V ++ L GL
Sbjct: 406 IFDLFYGGKAPG---EGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGL 462
Query: 270 KNSPFTGICLSNINL 284
P I + N+ +
Sbjct: 463 PEMPIKNIHIENVTM 477
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN++ + + +++ V FQNSP W +HP+ ++ +R V P + N DGID +
Sbjct: 445 FLRPNMLSITSCKYVLLEGVTFQNSPAWCLHPLLTEHITLRDVYAKNPWYAQNGDGIDLE 504
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S IE GDD + +KSG DE G G + + + T G VGSE S
Sbjct: 505 SCRYARIEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCTVYHAHGGFVVGSEMS 564
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 223
GG N+ + + +G+ KT GRGG + I V+++ M++ A+
Sbjct: 565 GGARNLFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKDIPAEAILLDMYYMAKD 624
Query: 224 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ ++G+ + + P +A P I +V +++ I+GL P + I L +
Sbjct: 625 PVPLSGEKREAVKVELFPVTDATPQFKDFHISNVVCHGAEKAIFIRGLPEMPISDIHLKD 684
Query: 282 INLQG 286
I ++
Sbjct: 685 ITIKA 689
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P I +N + + I + N+PFWN+ PVYC NV+IR +T+ + P DGID +SS
Sbjct: 221 PMFISPINCKKVYIEGITLHNTPFWNVVPVYCDNVIIRGITVQS-VGIPRGDGIDIESSR 279
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE +S+GDD +K+G E GI P+ + IR GI GSET+G +
Sbjct: 280 NVLIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENVVIRHCLAREGHGGITCGSETAGMI 339
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI--------AGDV 231
NV + G+ KT R G NI ++ M +K G++
Sbjct: 340 RNVYVRDCVFDDTDTGLRFKTRRSRAGGGENIVYENIRMNLRGDAVKFDMLGSRQYVGEL 399
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
D + + P IT +++ K + I G+ SP + + N
Sbjct: 400 ADRLPPRPVNDLTPAYRNITARNIVVDKARTFIDITGIPESPAANLLIEN 449
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 24/255 (9%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R + RP L+ F+ + +++ V F+NSP W +HP+ C ++ + +++ P
Sbjct: 230 WNSIRD----WLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWY 285
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S + V + +S GDD + +KSG DE G G P I IR
Sbjct: 286 SQNGDALDIESCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDNVVLHGH 345
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR--------------NIT 212
G VGSE SGGV+N+ ++ VG+ K+ GRGG +
Sbjct: 346 GGFVVGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEAL 405
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTKVQQSGLIQGL 269
+ D++ G GD P ++ P P I IK+V V ++ L GL
Sbjct: 406 IFDLFYGGNAPG---EGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAVLFNGL 462
Query: 270 KNSPFTGICLSNINL 284
P I L N+ +
Sbjct: 463 PEMPIKNIFLENVTI 477
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 134/301 (44%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQ------RTLPFTRPNLIEFMNSRSIIISNVI 77
I+ + ++ GE GTIDGQGA+WW WR + RP LI S ++I V
Sbjct: 137 IADAQNVAITGE-GTIDGQGAVWWERWRAAIRATGKKGGTDRPRLIYVTRSNRVLIDGVT 195
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
NSP +++ Y +V + I+AP +PNTD IDP S N+ I ++ I DD +A+
Sbjct: 196 LTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAI 255
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + V GI++GSETSGGV NVL E+ GI
Sbjct: 256 KAEKPDSRFPNGVVDNIYIANNVLKQG--RGISIGSETSGGVNNVLVENNRFEGSMYGIR 313
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+K+ G+GG ++N+T M + + +G +G+
Sbjct: 314 IKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGYYQAAPIVQAEVDKLLQAGGFTLGEQIY 373
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + +TI D+ T + + +G I G+ +P +G + +
Sbjct: 374 PPDTEPAQPFDKVKTPHFSQVTIVDLESTGRSKAAGYIIGVPEAPLSGFHFEQVRIDAEK 433
Query: 289 G 289
G
Sbjct: 434 G 434
>gi|427404324|ref|ZP_18895064.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
gi|425717175|gb|EKU80141.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
Length = 619
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP +IE + +++ +PFW HPV C +++IR V + + PN+DG DP+
Sbjct: 308 FLRPCMIELIGCSKVLLQGYQVNAAPFWLHHPVDCRDLLIRRVNM--ESLGPNSDGFDPE 365
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSET 175
S V ++D + GDD +A+K+G + + GH P+ + IR +S G+ +GSE
Sbjct: 366 SCDGVLVDDCLFNNGDDCIAIKAGKN---LDTGHGPTRNVVIRNCVMNSGHGGVTLGSEM 422
Query: 176 SGGVENVLAEHINLYNV-------GVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+GG+E+V AE + N+ I +KTN+ RGGF+R++ V DV + +
Sbjct: 423 AGGIEHVYAEKLEFRNIHWKDDPLNTAIRLKTNMNRGGFLRHLYVRDVTLPH 474
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 134/301 (44%), Gaps = 38/301 (12%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQ------RTLPFTRPNLIEFMNSRSIIISNVI 77
I+ + ++ GE GTIDGQGA+WW WR + RP LI S ++I V
Sbjct: 127 IADAQNVAITGE-GTIDGQGAVWWERWRAAIRATGKKGGTDRPRLIYVTRSNRVLIDGVT 185
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
NSP +++ Y +V + I+AP +PNTD IDP S N+ I ++ I DD +A+
Sbjct: 186 LTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAI 245
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
K+ + G + V GI++GSETSGGV NVL E+ GI
Sbjct: 246 KAEKPDSRFPNGVVDNIYIANNVLKQG--RGISIGSETSGGVNNVLVENNRFEGSMYGIR 303
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAG---------------------DVGDH-- 234
+K+ G+GG ++N+T M + + +G +G+
Sbjct: 304 IKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGYYQAAPIVQAEVDKLLQAGGFTLGEQIY 363
Query: 235 -----PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
P F+ P + +TI D+ T + + +G I G+ +P +G + +
Sbjct: 364 PPDTEPAQPFDKVKTPHFSQVTIVDLESTGRSKAAGYIIGVPEAPLSGFHFEQVRIDAEK 423
Query: 289 G 289
G
Sbjct: 424 G 424
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 134/292 (45%), Gaps = 47/292 (16%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWR--------------QRTLPFT----------RPN 61
+ E +S IG+ G IDG + W+ + +P RP+
Sbjct: 125 QLENVSIIGK-GVIDGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPH 183
Query: 62 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 121
L++F + ++I I +V N+PFW IH + N++ R I A N DGIDP+ + N+
Sbjct: 184 LVQFFDCKNITIEDVFITNAPFWCIHLLKSENIICR--GIRYDAKLVNNDGIDPEYTRNL 241
Query: 122 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 181
IE+ + GDD VA+K G D G PS I IR G+ +GSE S G+++
Sbjct: 242 LIENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCKFKG-LHGVVLGSEMSSGIQH 300
Query: 182 VLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD------- 233
V E+ GI +KTN RGGFIR D+Y+ N G+V D
Sbjct: 301 VFVENCTYGGYCKRGIFIKTNPDRGGFIR-----DIYVNNCE-----FGEVEDLFYVTSM 350
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 284
+ + + + V+ I +KD+ KV + L+ QG + P + N+++
Sbjct: 351 YAGEGMDNHHFTEVHDIYVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 402
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P
Sbjct: 229 WNEIR----PWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWY 284
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I ++ GDD + +KSG DE G G P + ++ T
Sbjct: 285 SQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGH 344
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G VGSE SGGV+NV VG+ K+ GRGG + I + ++ M
Sbjct: 345 GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G+ D + I W + RP L+ + S+ I++ V F+NSP W +HP+ C ++++
Sbjct: 217 GSEDKRTEITSEEWEDMK-SWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLIL 275
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
V + P S N D +D +S NV I + + GDD + +KSG DE G G P +
Sbjct: 276 NDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVI 335
Query: 157 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 216
+R T G +GSE SGGV+NV + VG+ K+ GRGG + NI ++++
Sbjct: 336 VRNNTVLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNI 395
Query: 217 YMENARKGIKIAG---DVGDHPDDKFN--PNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
M + IA V P + P I I DV+ ++ + GL
Sbjct: 396 NMIDIPNDALIADLYYAVKSAPGEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPE 455
Query: 272 SPFTGICLSNINLQG 286
P I + N+ + G
Sbjct: 456 MPIENISIKNMVVTG 470
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 29 KISFIGENGTIDGQGAIWWNMWRQRTLPFTR----------PNLIEFMNSRSIIISNVIF 78
++ I ENG + + + M + ++P +R P I ++I++
Sbjct: 167 RLKSIDENGKEINEKTLLYQMMKD-SIPASRRVFAGEKGIRPQFINLYKCKNILLEGFTL 225
Query: 79 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 138
SPFW IHP+ N+ +R V + + N DG DP+S NV I+ TGDD +A+K
Sbjct: 226 HRSPFWLIHPLLSENITVRKVIL--QSHGRNNDGCDPESCKNVLIDSCSFDTGDDCIAIK 283
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG--I 196
SG DE G + PS I +R +G+A+GSE +GG +NV E+ + + + I
Sbjct: 284 SGRDEDGRYWNIPSENIIVRNCLMKDGHAGVAIGSEITGGCQNVWVENCRMDSPELDRII 343
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGI 225
+K+N RGG ++NI V D+ + ++ I
Sbjct: 344 RIKSNSERGGEVKNIFVRDITVGECKESI 372
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 5/198 (2%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMN 67
W NA+ + E I +G G IDG WW ++R +P RP L+ F
Sbjct: 167 WEGNAVPMHQALIFAEYAEDIRIVGR-GVIDGNAEAGGWWENVKERNIP--RPRLLFFNR 223
Query: 68 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 127
+ I + + N+ W IHP + S + + I AP DSPNTD +DP++ NV I
Sbjct: 224 CKLITVHGITVCNAASWQIHPYFSSYLHFLDLDITAPKDSPNTDALDPEACDNVWISGCR 283
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 187
S GDD +A+KSG + G + P+ IR + +GSE +GGV N+ E
Sbjct: 284 FSVGDDCIAIKSGKIDIGRKFKQPAENHNIRNCLMQFGHGAVTLGSEMAGGVRNLTVERC 343
Query: 188 NLYNVGVGIHVKTNIGRG 205
+ G+ +KT GRG
Sbjct: 344 IFDHTDRGLRIKTRRGRG 361
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 106/216 (49%), Gaps = 33/216 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWR--------------QRTLP----------FTRPNLI 63
+ ++ IGE GTIDG +N+W +P F RP I
Sbjct: 150 KNVAIIGE-GTIDGNAKDSFNLWHGKQKQSQELSRKMNHENVPIEKRQFGEGHFLRPQFI 208
Query: 64 EFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCI 123
+F ++I+I V NSPFW +H + N+ R V A + N DG DP+ S NV I
Sbjct: 209 QFFECKNILIEGVTITNSPFWCVHFLKSENITARKVKF--DAFNKNNDGFDPEYSKNVLI 266
Query: 124 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR--RVTGSSPFSGIAVGSETSGGVEN 181
ED + DD +A+K+G D G G S I IR R G G+ +GSE S GV+N
Sbjct: 267 EDIDFNNADDNIAIKAGRDYEGRRIGLTSENIIIRNCRFKG---LHGVVIGSEMSAGVQN 323
Query: 182 VLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDV 216
V E+ GI++K+N RGGFIR+I +++V
Sbjct: 324 VFVENCTYGGYCKRGIYLKSNPDRGGFIRDIYINNV 359
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDG--QGAIWWNMWRQRTLPFTRPNLIEFMN 67
W NA+ + E I +G GT+DG Q + WW + + +P RP LI F
Sbjct: 167 WEGNAVPMHQALLFAEYAEDIKIVGR-GTVDGNAQNSQWWVDVKNQEVP--RPRLIFFNR 223
Query: 68 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 127
+ + + + QN+ W +HP + + + +++ AP DSPNTD +DP++ V I
Sbjct: 224 CKLVTVHGITAQNAASWQLHPYFSTELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCR 283
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 187
S GDD +A+KSG E G + P++ TIR I +GSE +GGV+N+
Sbjct: 284 FSVGDDCIAIKSGKIEIGRKFKQPANRHTIRNCIMQFGHGAITLGSEMAGGVKNLSVSRC 343
Query: 188 NLYNVGVGIHVKTNIGRG--GFIRNITVSDVYME 219
G+ +KT GRG I I ++ M+
Sbjct: 344 IFKETDRGLRIKTRRGRGKDAVIDGIEFKNIKMD 377
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 17/237 (7%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP++I+ ++ +++++ +NSPFW H VY + V+R +T+ + +PN DG+D DSS
Sbjct: 208 RPSMIQIFDAERVLLADYTVRNSPFWINHLVYTDDAVVRGLTV--DSHNPNNDGVDVDSS 265
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
++V IE + TGDD V VKSG D+ G G PS + +R GIA+GSE SGG
Sbjct: 266 TDVLIEHNTFRTGDDSVVVKSGRDKDGRDIGRPSRNVVVRH-NDMGGEDGIALGSEMSGG 324
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV-----GD 233
+ +V L + I K N+ RGG + +I V + +++ + I D GD
Sbjct: 325 ISHVYFTDNTLRSGAAAIRFKGNLDRGGTVEHIRVRNFDIDSFERLIWFQLDYPGELGGD 384
Query: 234 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
P PV I D T I G +P + L NI + P
Sbjct: 385 FP---------PVYRDIVFSDFTVTSADTLLEIHGPDAAPLRDVTLRNITVAHTDTP 432
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 17/239 (7%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P P + +N +++ + + +N+PFWNI P+YC NV+IR +T+ + P+ DGID
Sbjct: 203 PVYLPMFVSAVNCKNVYLEGLQLENTPFWNIVPIYCDNVIIRGITVNS-VGIPSGDGIDI 261
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+SS NV IE ++ GDD +K+G E G+ G P+ + IR GI VGSET
Sbjct: 262 ESSKNVLIEYCTLNCGDDCFTLKAGRGEDGLRIGKPTENVVIRYSLARQGHGGITVGSET 321
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--------I 227
+ + N+ + + VG+ KT RGG N+ + M +
Sbjct: 322 AAMIRNLYVHDVVFDDTEVGLRFKTRRPRGGGGENLHYERIRMRLRLDAFRWDMLGARMY 381
Query: 228 AGDVGDH----PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
G + D P +K PV I KD+ + + G+ SP TG L N+
Sbjct: 382 VGALADRLPALPVNKLT----PVYRNIYAKDIVVDSARALVRVDGIPESPMTGFHLQNV 436
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 42 QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 101
Q I W + + RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V +
Sbjct: 221 QAEITSEEWEEMK-SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKV 279
Query: 102 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 161
P S N D +D +S NV I + + GDD + +KSG DE G G P + +R T
Sbjct: 280 FNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNT 339
Query: 162 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 221
G +GSE SGGV+NV + VG+ K+ GRGG + NI ++++ M +
Sbjct: 340 VLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDI 399
Query: 222 RKGIKIAGDVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 276
IA P P I I DV+ ++ + GL P
Sbjct: 400 PNDALIADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIEN 459
Query: 277 ICLSNINLQG 286
I + N+ + G
Sbjct: 460 ISIKNMVVTG 469
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 116/254 (45%), Gaps = 8/254 (3%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G +GQ I W + RP ++ + S+ I++ V F+NSP W IHP+ C ++ +
Sbjct: 217 GQNNGQKEITDEEWTYMK-SWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTL 275
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
V + P S N D +D +S NV + + + GDD + +KSG DE G G +
Sbjct: 276 NDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVI 335
Query: 157 IRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDV 216
I+ T G +GSE SGGV NV + VG+ K+ GRGG + NI + ++
Sbjct: 336 IKNNTVLHGHGGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNI 395
Query: 217 YM---ENARKGIKIAGDVGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLK 270
M N + + V D P+ P+ PV I I +V ++ GL
Sbjct: 396 NMIDIPNDALTMDLYYAVNDFPETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLP 454
Query: 271 NSPFTGICLSNINL 284
P I + N+ +
Sbjct: 455 EMPLKNIFIKNMTV 468
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/102 (50%), Positives = 65/102 (63%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
RF S + + G NGTIDGQG WW+ + + L TRP +IE M S I ISN+
Sbjct: 1088 RFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMIEIMFSDHIQISNL 1147
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
NSP W +HP+Y S+++I+ +TILAP DSPNTDGIDP S
Sbjct: 1148 TLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPGDS 1189
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R + RP L+ F+ S+ +++ V F+NSP W +HP+ C ++ + + ++ P
Sbjct: 220 WNEIRA----WLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWY 275
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I +S GDD + +KSG DE G G P + ++ T
Sbjct: 276 SQNGDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGH 335
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 336 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 378
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 109/233 (46%), Gaps = 5/233 (2%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP L+ + S+ I++ V F+NSP W +HP+ C ++ + V + P S N D +D +S
Sbjct: 231 RPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALDVESC 290
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I + + GDD + +KSG DE G G P I +R T G +GSE SGG
Sbjct: 291 KNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGGFVIGSEMSGG 350
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 238
V+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 351 VKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAAKSAP 410
Query: 239 FNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 411 SEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 463
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 42 QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 101
Q I W + + RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V +
Sbjct: 215 QAEITSEEWEEMK-SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKV 273
Query: 102 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 161
P S N D +D +S NV I + + GDD + +KSG DE G G P + +R T
Sbjct: 274 FNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNT 333
Query: 162 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 221
G +GSE SGGV+NV + VG+ K+ GRGG + NI ++++ M +
Sbjct: 334 VLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDI 393
Query: 222 RKGIKIAGDVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 276
IA P P I I DV+ ++ + GL P
Sbjct: 394 PNDALIADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIEN 453
Query: 277 ICLSNINLQG 286
I + N+ + G
Sbjct: 454 ISIKNMVVTG 463
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 42 QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 101
Q I W + + RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V +
Sbjct: 221 QAEITSEEWEEMK-SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKV 279
Query: 102 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 161
P S N D +D +S NV I + + GDD + +KSG DE G G P + +R T
Sbjct: 280 FNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNT 339
Query: 162 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 221
G +GSE SGGV+NV + VG+ K+ GRGG + NI ++++ M +
Sbjct: 340 VLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDI 399
Query: 222 RKGIKIAGDVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 276
IA P P I I DV+ ++ + GL P
Sbjct: 400 PNDALIADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIEN 459
Query: 277 ICLSNINLQG 286
I + N+ + G
Sbjct: 460 ISIKNMVVTG 469
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R + RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P
Sbjct: 230 WNEIR----AWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWY 285
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I +S GDD + +KSG DE G G P + ++ T
Sbjct: 286 SQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGH 345
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ S+ I++ V F+NSP W +HP+ C + + + ++ P
Sbjct: 230 WNEIR----PWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 285
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D ID +S N I +S GDD + +KSG DE G G P + ++ T
Sbjct: 286 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGH 345
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 30 ISFIGENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
+ IG+ GTIDG G A WW + + + RP + ++ +++ + +NSP W +H
Sbjct: 189 VRIIGQ-GTIDGNGQNADWWVDCKVKRGAW-RPRSLYLVDCEDVVVEGITIKNSPSWTVH 246
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
PV + + +T+ P DSPNTDGIDP+S + V I S GDD +A+KSG +
Sbjct: 247 PVRSTKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKSGKISVPVD 306
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
PS I IR G+ +GSE SGG+++V E N G+ +KT GRG
Sbjct: 307 MRRPSENIIIRNCLMEYGHGGVVLGSEMSGGIKHVYVERCFFRNTDRGLRIKTRRGRGN- 365
Query: 208 IRNITVSDVYMENAR 222
+ ++Y++N +
Sbjct: 366 --TAVIDEIYIKNIK 378
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 130/294 (44%), Gaps = 26/294 (8%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
+ E+I GE G ID G ++ F R + N + + ++ + SP W
Sbjct: 155 RLEQIIIEGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWC 212
Query: 86 IHPVYCSNVVIRYVTILAPADSP--------NTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+H +YC+ V + ++ I D N DG++PDS+S+V I +S I++ DD +A+
Sbjct: 213 VHLIYCNGVSVNHIEIHTKKDEQGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAI 272
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
KSG +E G G PS I I T S F G+A GSE SGGV NV +V
Sbjct: 273 KSGRNEEGRRVGIPSQNIRISNCTFKSGF-GVATGSEMSGGVRNVRISDCRFEDVYSIAT 331
Query: 198 VKTNIGRGGFIRNITVSDVYMENA----------RKGIKIAG--DVGDHPDDKFNP--NA 243
+K GRG I N+TV D + N R I I D DK
Sbjct: 332 IKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEG 391
Query: 244 LPVVNGITIKD-VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 296
V+ I +K+ V T + + GL SP I L N+N G G + +K
Sbjct: 392 TSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLENVNALGKYGLKAYNIK 445
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 109/233 (46%), Gaps = 5/233 (2%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP L+ + S+ I++ V F+NSP W +HP+ C ++ + V + P S N D +D +S
Sbjct: 237 RPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALDVESC 296
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I + + GDD + +KSG DE G G P I +R T G +GSE SGG
Sbjct: 297 KNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGGFVIGSEMSGG 356
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 238
V+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 357 VKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAAKSAP 416
Query: 239 FNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 417 SEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 469
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 42 QGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI 101
Q I W + + RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V +
Sbjct: 221 QAEITSEEWEEMK-SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKV 279
Query: 102 LAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT 161
P S N D +D +S NV I + + GDD + +KSG DE G G P + +R T
Sbjct: 280 FNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNT 339
Query: 162 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 221
G +GSE SGGV+NV + VG+ K+ GRGG + NI ++++ M +
Sbjct: 340 VLHGHGGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDI 399
Query: 222 RKGIKIAGDVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 276
IA P P I I DV+ ++ + GL P
Sbjct: 400 PNDALIADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIEN 459
Query: 277 ICLSNINLQG 286
I + N+ + G
Sbjct: 460 ISIKNMVVTG 469
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 144/312 (46%), Gaps = 43/312 (13%)
Query: 27 FEKISFIGENGTIDGQGA-IWW----NMWRQRT---LPF-------------TRPNLIEF 65
+ ++ G+ G IDG GA +WW + +T LP+ RP LIEF
Sbjct: 104 VQDVAITGQ-GHIDGNGAAVWWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEF 162
Query: 66 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 125
+ + IS V NSP W + S + I ++TI PA S NTDGID SS +V +
Sbjct: 163 SHVQHGRISGVTATNSPMWTVVVRESSQIKIDHLTIRNPASSRNTDGIDLVSSDHVTMST 222
Query: 126 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 185
I+TGDD +A+KSG + G A S IT R G+++GSE + G ++
Sbjct: 223 LDIATGDDNIAIKSGLRQPGRAVSDIS--ITQSRF---GEGHGLSIGSELANGAHHIRIS 277
Query: 186 HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP---------D 236
++ N G+ +K+ RGG I I+ V M + R + I+ P
Sbjct: 278 DVSFQNTLSGLRIKSGRDRGGDIGWISAEHVMMNHVRAPLSISDYYAGQPGGTQKTVSMT 337
Query: 237 DKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 294
D P + P ++ +TI D+ + +G++ GL +P G+ L NI L G
Sbjct: 338 DPAAPVTSTTPHIHDVTITDLTAKNAETAGVVLGLPEAPIEGLTLRNIRLSARKG----- 392
Query: 295 LKCSDVSGSAYQ 306
L+ S VSG A +
Sbjct: 393 LQFSHVSGRASE 404
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R + RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P
Sbjct: 230 WNEIR----AWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWY 285
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I +S GDD + +KSG DE G G P + ++ T
Sbjct: 286 SQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGH 345
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|445494993|ref|ZP_21462037.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791154|gb|ELX12701.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 624
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP++++F++ +++ N+PFW +PV C N+ ++ I A + PN+DG DP+
Sbjct: 315 YLRPHMVQFISCTNVLFEGYQTTNTPFWQHNPVNCHNMHVK--RIYANSMGPNSDGFDPE 372
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S +NV IED + +TGDD +A+ SG I +G P+ I I+ S + +GS S
Sbjct: 373 SCTNVLIEDCHFNTGDDCIAIDSGKGP-DIQFG-PAKNIVIQNCKMQSGHGALTLGSIMS 430
Query: 177 GGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GG+EN+ A+++ N + + I +KTN+ RGG++RN+ V +V++ N
Sbjct: 431 GGIENIYAQNLVFENSYWKTDPLNIAIRLKTNMSRGGYLRNMHVRNVHIPN 481
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 109/250 (43%), Gaps = 17/250 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ + I++ FQNSP WNIHP+ +V IR +TI P S N DG+D +
Sbjct: 234 FLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQNGDGLDLE 293
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I ++ GDD + KSG +E G G P+ + ++ G VGSE S
Sbjct: 294 SCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNIVYHGHGGFVVGSEMS 353
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIKIAG-- 229
G V NV VG+ K+ GRGG + NI +S++ M E R + G
Sbjct: 354 GDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLFYGGNA 413
Query: 230 ---DVGDHPDDKFNP-------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 279
D GD+ P P I +K++ + GL + L
Sbjct: 414 PVMDDGDNSAPSEEPAEAVSVTEETPSFRNIFMKNIRANGFGNAAFFMGLPEMNLQNVHL 473
Query: 280 SNINLQGVAG 289
N L+G G
Sbjct: 474 ENAVLRGAQG 483
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 36 NGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSIIISNV 76
+GT+DGQGA+WW+ + +R L + RP + S + + +
Sbjct: 105 SGTLDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDF 164
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
++S FWN+H Y V ++ + ++ A +TDGID DSS V +E +S DD +
Sbjct: 165 TSKDSGFWNLHVCYSKQVNLQRLNVM-NATGTSTDGIDIDSSQLVRVEGCTVSCNDDNIC 223
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
VKSG + I IR T SGI +GSETSGG+ENV+ EH GVG
Sbjct: 224 VKSGRGAEAQQLARTARDIIIRDCTLLKG-SGITLGSETSGGIENVIIEHNRFSGTGVGF 282
Query: 197 HVKTNIGRGGFIRNITVSDVYMEN 220
+K+ RGG+I+NI V + ME+
Sbjct: 283 RIKSARNRGGWIKNIIVRHLIMED 306
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 46 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
WW+ ++ RP + + + + +S + +NSP W +HP + + I P
Sbjct: 204 WWSWPKETRAGARRPRALFLAHGQGVQLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPP 263
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG-----HPSSGITIRRV 160
DSPNTDG++P+S ++V + + S GDD +AVKSG G G P+ + +
Sbjct: 264 DSPNTDGLNPESCTDVTLAGIHFSVGDDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHC 323
Query: 161 TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
G+ +GSE SG + +V G+ +KT GRGG + + SDV M+
Sbjct: 324 LMERGHGGMVLGSEMSGDITDVTVTACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQG 383
Query: 221 ARKGIKIAGDVGDHPDDK------FNP----NALPVVNGITIKDVWGTKVQQSGL-IQGL 269
+ I PD + +P P ++ IT DV T V + + GL
Sbjct: 384 VGTPLAINAFYYCDPDGRSPEVQSRSPAPVDETTPKIHDITFSDVIATDVPVCAVAVLGL 443
Query: 270 KNSPFTGICLSNINLQGVAGPTSPP 294
+P TG+ L N + P++PP
Sbjct: 444 PEAPVTGVRLK--NFRASLDPSAPP 466
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 19/242 (7%)
Query: 54 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 113
T + RP I+ ++I+I V +NSPFW ++PV C +V + V + PN+DG
Sbjct: 212 TGAYLRPPFIQPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKVNF--SSHGPNSDGC 269
Query: 114 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 173
DP+S +V I++ TGDD +A+KSG + G G PS I I G+ +GS
Sbjct: 270 DPESCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCHMKEGHGGVVIGS 329
Query: 174 ETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI---- 227
E SGGV NV ++ + ++ I +KTN RGG I +I + +V + + + I
Sbjct: 330 EISGGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVINFYY 389
Query: 228 -AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 285
GD G +F+ P V I I+++ V + G + +P I N +
Sbjct: 390 EEGDAG-----QFD----PTVRDIQIENLHCKNVLSKAFYLNGFERAPINDIHFKNCHFD 440
Query: 286 GV 287
V
Sbjct: 441 QV 442
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R + RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P
Sbjct: 227 WNEIR----AWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWY 282
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I +S GDD + +KSG DE G G P + ++ T
Sbjct: 283 SQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGH 342
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 343 GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 385
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 110/240 (45%), Gaps = 28/240 (11%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F ++++ NSPFW IHP C NVVI + + A N DG+DP+ S
Sbjct: 208 RPQFIQFNRCENVLMEGFTVTNSPFWTIHPYLCKNVVISRLKVYAHGH--NNDGVDPEMS 265
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV I D GDD +A+KSG + G PS I IR +T + +A+GSE SGG
Sbjct: 266 QNVFITDCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNLTVKNGHQLVAIGSELSGG 325
Query: 179 VENVLAEHINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
+ENV + + H +KTN GG+++NI Y N G G +G
Sbjct: 326 IENVDISQCQVVDGAKLNHLLFIKTNERMGGYVKNI-----YASNLTAGKIDLGVLGIET 380
Query: 236 D-------------DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
D K P + ++ I++KD V+ I G K P + + NI
Sbjct: 381 DVLYQWRTLVPTKIRKLTPISDIYLSNISVKD-----VKFESRILGQKELPVKNVSMKNI 435
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + V ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYSQNGDAIDL 295
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Query: 33 IGENGTIDGQGAIWWNMWRQRTLPFT----------RPNLIEFMNSRSIIISNVIFQNSP 82
+ ++G + + + M ++ ++PF RP I ++I++ +P
Sbjct: 173 VQKDGKHTNEKTLLYEM-KEDSVPFDKRVFSGKSSIRPQFINLYKCKNILLEGFTINRAP 231
Query: 83 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 142
FW IHP+ NV IR V + + N DG DP+S +NV IED TGDD +A+KSG D
Sbjct: 232 FWLIHPLLSENVTIRKVKM--QSHGYNNDGCDPESCNNVLIEDCDFDTGDDCIAIKSGRD 289
Query: 143 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG--IHVKT 200
E G + PS I +R +G+A+GSE +GG NV E+ + + + I +K+
Sbjct: 290 EDGRFWNIPSENIIVRNCRMKDGHAGVAIGSEVTGGCRNVWVENCRMDSPELDRIIRIKS 349
Query: 201 NIGRGGFIRNITVSDVYMENARKGI 225
N RGG + N+ V ++++ ++ I
Sbjct: 350 NAIRGGEVENLFVRNIFVGECKESI 374
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP ++ + + I++ V F+NSP WNIHP +C N+ +R VT+ P + N DGID +
Sbjct: 199 FYRPVMVSLRHCKRILLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYAQNGDGIDVE 258
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S V I + TGDD + +KSG + P + I + G +GSE S
Sbjct: 259 SCKKVHIHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCLVNEGHGGFVIGSEMS 318
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
G++NVL E+ VG+ +K+ +GRGG
Sbjct: 319 RGIKNVLVENCTFLGTDVGVRIKSALGRGG 348
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ +++++ V F+NSP W +HP+ C ++ I V + P
Sbjct: 183 WNEIR----PWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWY 238
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S +N + ++ GDD + +KSG DE G G P + ++
Sbjct: 239 SQNGDALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLHGH 298
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
G VGSE SGGV+N+ VG+ K+ GRGG + NI + ++ M
Sbjct: 299 GGFVVGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINM 350
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
E ++ IG NG IDG +I WW +++ + + RP +I + ++I++ +V +NSP W
Sbjct: 163 ENVNIIG-NGIIDGNASIDNWWFEAKKKRIAW-RPRMIFLVGCKNILVESVTVKNSPSWT 220
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHP+ ++ + I P DSPNTDG+DP+S NV I S GDD +A+KSG
Sbjct: 221 IHPLMSEDLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFIS 280
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
PS I IR + + +GSE S G+ N+ E+ GI +KT GRG
Sbjct: 281 KIKTMPSQHIYIRNCNMNFGHGAVVLGSEMSSGINNIYVENCLFNETDRGIRIKTRRGRG 340
Query: 206 G-------FIRNITVSDV 216
+ RNI ++ V
Sbjct: 341 DTAIIDEIYARNIKMNKV 358
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 130/294 (44%), Gaps = 26/294 (8%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
+ E+I GE G ID G ++ F R + N + + ++ + SP W
Sbjct: 198 RLEQIIIEGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWC 255
Query: 86 IHPVYCSNVVIRYVTILAPADSP--------NTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+H +YC+ V + ++ I D N DG++PDS+S+V I +S I++ DD +A+
Sbjct: 256 VHLIYCNGVSVNHIEIHTKKDEHGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAI 315
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
KSG +E G G PS I I T S F G+A GSE SGGV NV +V
Sbjct: 316 KSGRNEEGRRVGIPSQNIRISNCTFKSGF-GVATGSEMSGGVRNVRISDCRFEDVYSIAT 374
Query: 198 VKTNIGRGGFIRNITVSDVYMENA----------RKGIKIAG--DVGDHPDDKFNP--NA 243
+K GRG I N+TV D + N R I I D DK
Sbjct: 375 IKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEG 434
Query: 244 LPVVNGITIKD-VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 296
V+ I +K+ V T + + GL SP I L N+N G G + +K
Sbjct: 435 TSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLENVNALGKYGLKAYNIK 488
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP + +++I F SPFW +HP+ NV++R V + + N DG DP+S
Sbjct: 207 RPQFVNTYKCENVLIEGPTFNRSPFWILHPLLSKNVIVRDVNL--DSHGRNNDGCDPESC 264
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
NV IE +TGDD +A+KSG DE G + PS I IR +G+ +GSE +GG
Sbjct: 265 ENVLIERCRFNTGDDCIAIKSGKDEDGRVWNIPSKNIIIRNCEMKDGHAGVGIGSEITGG 324
Query: 179 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDV 216
ENV E+ + N+ I +K+N RGG ++N+ V +V
Sbjct: 325 CENVWVENCKMDSPNLTRVIRIKSNPERGGEVKNLYVRNV 364
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 23 LISKFEKISF-IGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS 81
LI F+ I+ I N +DG G WW ++ P TRP ++ R + + N+ ++S
Sbjct: 112 LIRAFDHINITIRGNAVLDGHGETWW---KRMPPPSTRPVFLQIFWVRYLTLENITVKSS 168
Query: 82 PFWNIHPVYCSNVVIRYVTILAPAD----SPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
P +N++ C +V IR + I PA+ PNTDGI+ +S V I ISTGDD +A+
Sbjct: 169 PMFNVNLKNCDDVTIRGIKIRNPANYVDPGPNTDGINVNSCRRVHITGVNISTGDDCIAL 228
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
+ P+ + I + G+++GS TSGG+ NV + G+
Sbjct: 229 DANGKG---KTKTPTEDVLIEDSHMYAGHGGVSIGSVTSGGLRNVTVRNCIFNGTNRGLF 285
Query: 198 VKTNIGRGGFIRNITVSDVYMENARK-GIKIAG-----DVGDHPDDKF-NP--NALPVVN 248
+K+ GRGG + +I ++ M + RK GI IA D G D + P P +
Sbjct: 286 IKSRRGRGGLVEDIHYHNIQMVDLRKEGIAIAAIYNGSDPGLRSRDFYWEPVNETTPFIR 345
Query: 249 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ K++ G V I GL SP + +N+ ++
Sbjct: 346 NVEFKNIHGDSVLNPIFIVGLPESPIENVTFTNVKIE 382
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP ++ +N + +++ V FQNSP WN++P+ C NV + + I P S N DG+D +S
Sbjct: 235 RPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQNGDGLDLESC 294
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
+ + GDD + +KSG D+ G G P+ I+ G +GSE SGG
Sbjct: 295 RIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVVYHGHGGFVIGSEMSGG 354
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
V N+ +++ G+ K+ GRGG + NI + D+ M +
Sbjct: 355 VRNLFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSD 396
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|383315603|ref|YP_005376445.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379042707|gb|AFC84763.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 441
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 10/239 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
RP LIE S + I V N+P WN+ Y ++ IR V+IL PADSPNTDGID
Sbjct: 171 LPRPWLIEIHRSADVRIEGVHIINAPMWNLVTRYSHDIDIRGVSILNPADSPNTDGIDVV 230
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG--SSPFSGIAVGSE 174
+S +V I DS ISTGDD +A+KSG + P+ R+ G++VGSE
Sbjct: 231 ASRHVRIRDSRISTGDDCIAIKSGLPGSRL----PAEATVDVRIDHLWLGRGHGLSVGSE 286
Query: 175 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 234
T G+ V + G+ +K+ RG I +I + M+ I +
Sbjct: 287 TLFGIRGVDVRDVVFQGTDAGVRIKSGRDRGNRISDIHFRHLRMKGVGTAISVLAYYPKP 346
Query: 235 PDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
++ A+ P ++ +++ DV + +GL+ GL SP GI L +++LQ +G
Sbjct: 347 APEQDPAQAVTATTPWISDVSVTDVQAEGSRVAGLLIGLPESPLRGIRLGHLSLQAGSG 405
>gi|388519421|gb|AFK47772.1| unknown [Medicago truncatula]
Length = 425
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 127/265 (47%), Gaps = 20/265 (7%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
+K KI+ G+ G IDGQG++WWN LP T+P + F S + +S + QNS
Sbjct: 131 TKLNKITIKGK-GVIDGQGSVWWN--DSEKLPKTKPTALRFYGSDGVSVSGITIQNSQQT 187
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
++ C+NV + +T +P DSPNTDGI +S +V I S +S GDD V++++G
Sbjct: 188 HLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVISGSTLSCGDDCVSIQTG---- 243
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKT 200
S I + V P GI++GS T V NV + L N G+ +KT
Sbjct: 244 -------CSNILVHNVN-CGPGHGISIGSLGKENTKACVSNVTVRDVTLQNTLTGVRIKT 295
Query: 201 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 260
G G ++NI S++ + + + I I D + N + V+ I +V GT
Sbjct: 296 WQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGKCR-NVTSAVAVSSIHYTNVHGTYT 354
Query: 261 QQSGLIQGLKNSPFTGICLSNINLQ 285
++ + P GI L I L+
Sbjct: 355 KEPIYFACSDSLPCKGITLDTIKLE 379
>gi|357495809|ref|XP_003618193.1| Polygalacturonase [Medicago truncatula]
gi|355493208|gb|AES74411.1| Polygalacturonase [Medicago truncatula]
Length = 425
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 127/265 (47%), Gaps = 20/265 (7%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
+K KI+ G+ G IDGQG++WWN LP T+P + F S + +S + QNS
Sbjct: 131 TKLNKITIKGK-GVIDGQGSVWWN--DSEKLPKTKPTALRFYGSDGVSVSGITIQNSQQT 187
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
++ C+NV + +T +P DSPNTDGI +S +V I S +S GDD V++++G
Sbjct: 188 HLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVISGSTLSCGDDCVSIQTG---- 243
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKT 200
S I + V P GI++GS T V NV + L N G+ +KT
Sbjct: 244 -------CSNILVHNVN-CGPGHGISIGSLGKENTKACVSNVTVRDVTLQNTLTGVRIKT 295
Query: 201 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 260
G G ++NI S++ + + + I I D + N + V+ I +V GT
Sbjct: 296 WQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGKCR-NVTSAVAVSSIHYTNVHGTYT 354
Query: 261 QQSGLIQGLKNSPFTGICLSNINLQ 285
++ + P GI L I L+
Sbjct: 355 KEPIYFACSDSLPCKGITLDTIKLE 379
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 111/235 (47%), Gaps = 18/235 (7%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP I+F S +I++ V NSPFW IHP NV I+ VT+ A N DG+DP+ S
Sbjct: 206 RPQFIQFNRSENILLQGVTITNSPFWVIHPYLSKNVSIKEVTVFAHGH--NNDGVDPEMS 263
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
N+ IE+ GDD +AVKSG ++ P+ I I+ + +A+GSE SGG
Sbjct: 264 QNIIIENCTFDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCKIINGHQLMAIGSELSGG 323
Query: 179 VENVLAEHINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
+EN+ + + H +KTN RGG VS++YM++ + G G +G
Sbjct: 324 IENIYMSNCQVEQGAKLNHLLFIKTNERRGGI-----VSNIYMDSIQAGEIAEGILGIDT 378
Query: 236 DDKFN--------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
D + L V+ + + D+ V I G + P + L+ +
Sbjct: 379 DVLYQWRNLVPTYQRELTVIKDVYLSDIHAENVAFISKISGQEQVPVKNVVLNRV 433
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RPN ++ ++I+I V SP W +HPV N+ +R V I + PN DG DP+
Sbjct: 602 FLRPNFVQPYRCKNILIEGVSIIRSPMWELHPVLSQNITVRNVKITS--HGPNNDGFDPE 659
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S ++ +ED+ TGDD +A+KSG + G P+ + IRR G+ +GSE +
Sbjct: 660 SCRDILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCVMKDGHGGVVLGSECT 719
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
GG+ N+ E + ++ G+ K N RGG + N V+M N + G
Sbjct: 720 GGIRNIFVEDCEMDSPDLDRGLRFKNNAVRGGVLEN-----VFMRNVKIG 764
>gi|449446684|ref|XP_004141101.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449489467|ref|XP_004158321.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 477
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWN-----------MWRQRT---LPFTRPNLIEFMNSR 69
+K + I+ G GTIDGQG++WWN + ++ + LP T+P + F S
Sbjct: 170 FTKLKGITVKG-TGTIDGQGSVWWNDSPTDNPTDKNLDKESSGGELPSTKPTALRFYGSD 228
Query: 70 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 129
+ +S + QNS ++ C+ V + +TI +P DSPNTDGI +S NV I +S I+
Sbjct: 229 EVTVSGITIQNSQKAHLKFDSCTAVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNIA 288
Query: 130 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG----SETSGGVENVLAE 185
GDD +++++G SSG+ I V P GI++G +T V NV
Sbjct: 289 CGDDCISIQTG-----------SSGVYIHNVN-CGPGHGISIGGLGRDDTKACVSNVTVR 336
Query: 186 HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALP 245
+ L N G+ +KT G G ++ I S++ + + + I I D N ++
Sbjct: 337 DVKLQNTMNGVRIKTWQGGSGLVQGILFSNIQVTDVQTPIMIDQYYCD-GGRCHNGSSAV 395
Query: 246 VVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 293
++G+ ++ GT + P TG+ L I L+G +G P
Sbjct: 396 AISGVNYVNIRGTYTSTPVHFACSDSLPCTGVTLDTIQLEGSSGSNEP 443
>gi|357462819|ref|XP_003601691.1| Polygalacturonase [Medicago truncatula]
gi|355490739|gb|AES71942.1| Polygalacturonase [Medicago truncatula]
Length = 404
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 29/273 (10%)
Query: 26 KFEKIS--FIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF 83
+F KIS + G IDGQG+ WW+ + + RP + F++ +++ +SN+ NSP
Sbjct: 119 QFSKISGLVVNGEGNIDGQGSPWWDKFGGKGQEKFRPTALRFLDCQALTLSNLNHMNSPK 178
Query: 84 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 143
+I C N I + I AP SPNTDGID S+N+ I +S I TGDD +A+ +G
Sbjct: 179 NHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETGDDCIAINNG--- 235
Query: 144 YGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVK 199
SS ITI T P GI+VGS + VE+V ++ G +K
Sbjct: 236 --------SSVITITG-TFCGPGHGISVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIK 286
Query: 200 TNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV--NGITIKDVWG 257
T G G+ RNIT D+ + + + I D +NPNA V + +T ++ G
Sbjct: 287 TFEGGSGYARNITYEDIILNEVKNPVII--------DQAYNPNADSAVEISDVTYSNIRG 338
Query: 258 TKVQQSGL-IQGLKNSPFTGICLSNINLQGVAG 289
T V + + ++ N I L +IN+ G
Sbjct: 339 TSVGEYAIELKCELNIGCNNIVLDHINITRADG 371
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMW---RQRTLP----------FTRPNLIEFMNSRS 70
+ K + GE GTIDG G+ WW + R + P RP LI+ +S +
Sbjct: 111 VYKQTDVQITGE-GTIDGDGSYWWKSYWDLRAKYEPKGLRWASDYDAKRPRLIQVFDSSN 169
Query: 71 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYI 128
+ + + S FW +H Y +V I +VTI P+TDGID DSS +V ++ + I
Sbjct: 170 VKLDGPMLTRSGFWTVHICYSHDVTIDHVTIRNNEGGKGPSTDGIDIDSSHDVLVQHADI 229
Query: 129 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 188
DD + +K+G D G+ P+ + +R + + + GSETSGG N+ A ++
Sbjct: 230 DVNDDALCLKAGRDSDGLRVNRPTYNVVLRDSLIRTGAAAVTFGSETSGGFRNIEAYNLT 289
Query: 189 -LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 227
L V G+ +K+ RGGF N+ V D++++ + IK+
Sbjct: 290 ALRGVTNGVLIKSAKVRGGFGENLRVHDLHLDGVKTPIKV 329
>gi|326528133|dbj|BAJ89118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 414
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 131/287 (45%), Gaps = 24/287 (8%)
Query: 37 GTIDGQGAIWW--NMWRQRTLPF-TRP--NLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 91
GTIDG G WW + R+ T P TRP + F R + + V QN P +++ C
Sbjct: 135 GTIDGVGHEWWARSCKRKNTQPCNTRPPPRAVHFEECRGVSVQGVTLQNGPQFHLSFTRC 194
Query: 92 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 151
+V ++ ++APADSPNTDGI + SS V I D+ ISTGDD V++
Sbjct: 195 VDVKANFLRVVAPADSPNTDGIHLNDSSRVQIMDNLISTGDDCVSMVGN----------- 243
Query: 152 SSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
S + +R ++ P GI++GS T+ VENV + L N G+ +K+ G G
Sbjct: 244 CSDVRVRDIS-CGPGHGISIGSLGKNRTTDRVENVRVDTCLLTNTTNGVRIKSWQGGTGS 302
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
R++ + M+N I I D P N V + DV GT +
Sbjct: 303 ARDLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQTEAVEVRKVEFVDVRGTSATAQAIRI 362
Query: 268 GLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ-VKPWPC 312
++ P T + L N+NL V G + C SG A V PW C
Sbjct: 363 ACSDAVPCTELELRNVNLT-VVGGGAATASCYRASGKAAGVVVPWSC 408
>gi|431796697|ref|YP_007223601.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787462|gb|AGA77591.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 539
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P I + + + I V + + FWNI PVYC V+IR VT+ + P DGID +SS
Sbjct: 224 PMFISPTDCKDVYIEGVTLERTAFWNIVPVYCDGVIIRGVTVNS-VGIPRGDGIDIESSR 282
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE S ++ GDD +K+G + GI P+ + +R GI +GSET+G +
Sbjct: 283 NVLIEYSTLNNGDDCFTMKAGRGKDGIRVNKPTENVVVRYCLAKEGHGGITIGSETAGKI 342
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--------IAGDV 231
N+ N GVGI KT RGG +N+ + M + + GD+
Sbjct: 343 NNLYIHDCVFDNTGVGIRFKTRRPRGGGGQNLYYERLRMNLRQTAFRWDMLGQELYVGDL 402
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 282
+ + P ITIKD+ I G+ SP + + N+
Sbjct: 403 AKRKPPRAVNDLTPKFKDITIKDILVETASTFVNINGIPESPLENLHMENV 453
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ I++ V F+NSP W +HP+ C + + + ++ P
Sbjct: 230 WNEIR----PWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 285
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D ID +S N I +S GDD + +KS DE G G P + ++ T
Sbjct: 286 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKNNTVLHGH 345
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
G VGSE SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|399087913|ref|ZP_10753337.1| endopolygalacturonase [Caulobacter sp. AP07]
gi|398031883|gb|EJL25254.1| endopolygalacturonase [Caulobacter sp. AP07]
Length = 458
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 141/311 (45%), Gaps = 50/311 (16%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWN----MWR-----------QRTLPFTRPNLIEFMNS 68
+ + ++ +GE G IDGQGA+WW +WR ++ RP LI +S
Sbjct: 120 VKDADNVAVVGE-GLIDGQGAVWWERIRAIWRANPNFATDGQARQQQKDDRPRLILVSHS 178
Query: 69 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYI 128
+I V +NSP +++ +V I V I APA +PNTD IDP S +V I ++ I
Sbjct: 179 TNIRFEGVRIENSPSFHLVLNDTDHVTIDRVRITAPAHAPNTDAIDPIDSRHVVITNNVI 238
Query: 129 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS--GIAVGSETSGGVENVLAEH 186
S GDD+VA+KS G HP + + ++G++ + GI +GS TSGGV V E+
Sbjct: 239 SVGDDIVAIKSN----GPDPRHPDAVSSDILISGNTILAGRGICIGSGTSGGVTRVRVEN 294
Query: 187 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK----------------------- 223
+ G+ +KT G+GG +R++ + M+N
Sbjct: 295 NSFDGSMYGLRIKTMRGKGGKVRDVVFKNNRMKNVETPLVFTSYYEYRPLDLKAATALLQ 354
Query: 224 --GIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 278
G + + P D P + P + I + + T +G++ GL P G+
Sbjct: 355 PGGFLLGNQIWPGPTDPAQPIAADKTPDMADIVVDGLTATGADLAGIVVGLPERPIAGLT 414
Query: 279 LSNINLQGVAG 289
L ++ ++ G
Sbjct: 415 LRDVRIEAKHG 425
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 17/278 (6%)
Query: 36 NGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GTIDG G WW ++ RP I + R + +S + +NSP W IHPV C +
Sbjct: 195 QGTIDGGGDRGDWWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEH 254
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V+ +TI SPNTDG++P++SS++ + IS GDD +A+K+G + P+
Sbjct: 255 VLAVGLTIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTR 314
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
+ IR + +GSE S G+ +V + G+ +KT GRGG + +I +
Sbjct: 315 RVEIRNCLMQLGHGAVVMGSEMSRGIHDVSISRCHFVGTDRGLRIKTRRGRGGAVSDIHL 374
Query: 214 SDVYMENARKGIKIAG----DVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS 263
S M+ I + D + + N LP+ ++ ITI+DV + + +
Sbjct: 375 SQCRMDGVATPIAVNAFYFCDADGRSEYVQSRNPLPLSIETPRISNITIRDVVVSGAETA 434
Query: 264 GLI-QGLKNSPFTGICLSNINL---QGVAGPTSPPLKC 297
+ GL + + +++ +G A P P + C
Sbjct: 435 AAVFYGLPECEIDAVSVDGLSIVYGEG-AKPGLPEMAC 471
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 131/319 (41%), Gaps = 24/319 (7%)
Query: 26 KFEKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF 83
+ E + GE G IDGQ + WW F RP ++ + I + +NSP
Sbjct: 187 EVENVVIYGE-GLIDGQASFENWWKDAGTMRGAF-RPRMVFLERCKDITLQGFYLKNSPA 244
Query: 84 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 143
W +HP + + + I PADSPNTDG+DP+S +V I + S GDD +AVKSG
Sbjct: 245 WVLHPYFSQGLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAVKSGKIY 304
Query: 144 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
G Y PS I IR+ + + VGSE GV+ V + G+ VKT G
Sbjct: 305 MGRRYKTPSENIEIRQCLMENGHGAVTVGSEVGAGVKAVRVRDCLFRHTDRGLRVKTRRG 364
Query: 204 RG--GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN----PNALPV------VNGIT 251
RG + +I+ + M++ + PD K ALP + ++
Sbjct: 365 RGKDSVLSDISFQHIVMDHVMTPFVVNSFYFCDPDGKTEYVQCREALPADERTPEIQNLS 424
Query: 252 IKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINL-------QGVAGPTSPPLKCSDVSGS 303
D+ + + GL I L N+++ +GV CS +
Sbjct: 425 FTDIKAANCHAAASFLCGLPEQKIRQIELRNVDISFAEQAREGVPAMMEGVSACSRQGFT 484
Query: 304 AYQVKPWPCSELSSSQQTG 322
V C ++ + Q G
Sbjct: 485 VMNVDTLVCENVTITGQKG 503
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 5/175 (2%)
Query: 46 WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA 105
W M R + RP L+ + S+ +++ V F+NSP W +HP+ C ++ + V + P
Sbjct: 227 WEGMKR-----WLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPW 281
Query: 106 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 165
S N D +D +S NV + +S GDD + +KSG + G G P + ++ T
Sbjct: 282 YSQNGDALDVESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTVLHG 341
Query: 166 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
G VGSE SGGV NV VG+ K+ GRGG + N+ V ++ M N
Sbjct: 342 HGGFVVGSEMSGGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINMIN 396
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
++ F RP ++ + +++ FQNSP WNIHP+ +++IR +T+ P S N D
Sbjct: 233 EKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWYSQNGD 292
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
G+D +S NV I ++ GDD + KSG +E G G P+ + ++ G +
Sbjct: 293 GLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNVVYHGHGGFVI 352
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
GSE SGGV NV + VG+ K+ GRGG + NI + ++ M
Sbjct: 353 GSEMSGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDM 399
>gi|357462815|ref|XP_003601689.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
gi|355490737|gb|AES71940.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
Length = 400
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 128/291 (43%), Gaps = 32/291 (10%)
Query: 32 FIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 91
I GT DGQGA WW + RP ++F+ ++ + + +SP +I V C
Sbjct: 130 IISGEGTFDGQGASWWKNYNDHG----RPTALQFLGCDNLKLGPLRHIDSPKNHISIVDC 185
Query: 92 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 151
+ +I ++ I+AP +SPNTDGID S+N+ IE S ISTGDD +A+ SG
Sbjct: 186 NGALISHLHIIAPENSPNTDGIDISRSTNIIIEHSTISTGDDCIAINSG----------- 234
Query: 152 SSGITIRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIGRGGF 207
S I I + P GI+VGS G VE V H G +KT G+
Sbjct: 235 SKFINITAIN-CGPGHGISVGSLGKDGKYATVEEVHVSHSIFTGTENGARIKTWTAGTGY 293
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV-----WGTKVQQ 262
R IT D+ + I I D D + V G+ + DV GT ++
Sbjct: 294 ARKITYEDITLIKVNNPIII-----DQHYDALESVSDSVRKGVKVSDVTFRGFRGTANEK 348
Query: 263 SGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP-WPC 312
+ T I L NIN+ G+ G P C++V GS P PC
Sbjct: 349 DAIELNCARIGCTNIVLENINIAGLGGE-KPSASCNNVQGSCSSCNPNVPC 398
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 129/294 (43%), Gaps = 26/294 (8%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
+ E+I GE G ID G ++ F R + N + + ++ + SP W
Sbjct: 198 RLEQIIIEGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWC 255
Query: 86 IHPVYCSNVVIRYVTILAPADSP--------NTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+H +YC+ V + +V I D N DG++PDS+S+V I +S I++ DD +A+
Sbjct: 256 VHLIYCNGVSVNHVEIHTKKDERGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAI 315
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
KSG +E G G PS I I S F G+A GSE SGGV NV +V
Sbjct: 316 KSGRNEEGRRVGIPSQNIRISNCIFKSGF-GVATGSEMSGGVRNVRISDCRFEDVYSIAT 374
Query: 198 VKTNIGRGGFIRNITVSDVYMENA----------RKGIKIAG--DVGDHPDDKFNP--NA 243
+K GRG I N+TV D + N R I I D DK
Sbjct: 375 IKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEG 434
Query: 244 LPVVNGITIKD-VWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 296
V+ I +K+ V T + + GL SP I L N+N G G + +K
Sbjct: 435 TSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLENVNALGKYGLKAYNIK 488
>gi|325568850|ref|ZP_08145143.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
gi|325157888|gb|EGC70044.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
Length = 537
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
R LI M +++I ++ + + P W +H +YC VV VTI + N DG DPDSS
Sbjct: 263 RGRLICMMQAKNIHLTELTLIDPPCWTVHMIYCDTVVTHGVTIQSKGID-NGDGWDPDSS 321
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
N+ I D+ TGDD +A+KSG + G P+ I + + GIA+GSE SGG
Sbjct: 322 QNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNIRLFDLAIRGGH-GIAIGSEQSGG 380
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 238
VEN+ L N G+ +K RGG+IR +T++D ++ +A V + D +
Sbjct: 381 VENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRF-----MAHPVAYNADGQ 435
Query: 239 FNPNALPVVNGITIKDV----WGTKVQQSGLI--QGLKNSPFTGICLSNINLQGVAGPTS 292
LP+++ I +K+ V+ G + Q + SP + ++ + G
Sbjct: 436 -AAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQVSPIQRVTFESVAFESAKGQKK 494
Query: 293 PPL-KCSDVS 301
+C ++S
Sbjct: 495 MIFEQCQEIS 504
>gi|420263795|ref|ZP_14766431.1| glycoside family 77 [Enterococcus sp. C1]
gi|394769237|gb|EJF49100.1| glycoside family 77 [Enterococcus sp. C1]
Length = 537
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
R LI M +++I ++ + + P W +H +YC VV VTI + N DG DPDSS
Sbjct: 263 RGRLICMMQAKNIHLTELTLIDPPCWTVHMIYCDTVVTHGVTIQSKGID-NGDGWDPDSS 321
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
N+ I D+ TGDD +A+KSG + G P+ I + + GIA+GSE SGG
Sbjct: 322 QNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNIRLFDLAIRGGH-GIAIGSEQSGG 380
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 238
VEN+ L N G+ +K RGG+IR +T++D ++ +A V + D +
Sbjct: 381 VENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRF-----MAHPVAYNADGQ 435
Query: 239 FNPNALPVVNGITIKDV----WGTKVQQSGLI--QGLKNSPFTGICLSNINLQGVAGPTS 292
LP+++ I +K+ V+ G + Q + SP + ++ + G
Sbjct: 436 -AAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQVSPIQRVTFESVAFESAKGQKK 494
Query: 293 PPL-KCSDVS 301
+C ++S
Sbjct: 495 MIFEQCQEIS 504
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
+R F RP ++ F+ ++I V QNSP WN+HP+ C+N+ + I P + N D
Sbjct: 196 ERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAFIKNPYYAQNGD 255
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
GID +S V I ++ GDD + +KSG +E G P+ + I T G V
Sbjct: 256 GIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCTVMHAHGGFVV 315
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 218
GSE S G+ V ++ VGI K+ +GRGG + NI + ++ M
Sbjct: 316 GSEMSRGMSEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINM 362
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%)
Query: 56 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 115
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 233 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNGDALDL 292
Query: 116 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 175
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 293 ESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVLHGHGGFVVGSEM 352
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
SGGV+N+ VG+ K+ GRGG +
Sbjct: 353 SGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVE 386
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
Query: 141 WDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVK 199
WDEYGI+Y PS+ I IR + S S GI++GSE SGGV NV E++ +++ + +K
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 200 TNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTK 259
T GRGG++++IT ++ EN R GI I D +HPD+ ++ A P++ I+ V G
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQG 120
Query: 260 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 315
V+ I G + P + ++++ G+ +C+ V G + P PC L
Sbjct: 121 VRVPVRIHGSEEIPVRNVTFQDMSV-GLTYKKKHIFQCAFVQGRVIGSIFPAPCENL 176
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 150/315 (47%), Gaps = 49/315 (15%)
Query: 27 FEKISFIGENGTIDGQGA-IWW----NMWRQRT---LPF-------------TRPNLIEF 65
+ ++ G+ G IDG GA +WW + +T LP+ RP LIEF
Sbjct: 143 VQDVAITGQ-GHIDGNGAAVWWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEF 201
Query: 66 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 125
+ + IS V NSP W + S + I ++TI PA S NTDGID SS +V + +
Sbjct: 202 SHVQHGRISGVTATNSPMWTVVVRESSQIRIDHLTIRNPASSRNTDGIDLVSSDHVTMSN 261
Query: 126 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF---SGIAVGSETSGGVENV 182
I+TGDD +A+KSG + G A +S I+I + S F G+++GSE + G ++
Sbjct: 262 LEIATGDDNIAIKSGLTQPGQA----ASDISITQ----SRFGEGHGLSIGSELANGAHHI 313
Query: 183 LAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI----AGDVGDHPDDK 238
++ N G+ +K+ RGG I I+ + M++ R + I AG G
Sbjct: 314 RISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHLTMDHVRVPLSISDYYAGQPGGTQQTA 373
Query: 239 F--NPNA-----LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 291
P A P ++ +TI D+ T G++ GL +P G+ L ++ L G
Sbjct: 374 LMTEPAAPVTSTTPHIHDVTITDMTATNAGTVGVVLGLPEAPIEGLTLRHVRLSARKG-- 431
Query: 292 SPPLKCSDVSGSAYQ 306
L+ S VSG +++
Sbjct: 432 ---LQLSHVSGRSFE 443
>gi|253688511|ref|YP_003017701.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755089|gb|ACT13165.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 437
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 137/300 (45%), Gaps = 35/300 (11%)
Query: 22 FLISKFEKISFIGENGTIDGQGAI-WWNM--------------WRQRTLP-------FTR 59
F+++K K I G IDGQG WW + W + P R
Sbjct: 107 FILAKDVKNIAIAGPGVIDGQGQQRWWPLATEARNHLKHGDTNWFTQHYPGIPTANGMPR 166
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LIEF N IS + +NSP WN+ ++ + TI P+DSPNTDGID SS
Sbjct: 167 PWLIEFANVSQGKISGIGIENSPMWNLVIRDSHHIEVTNSTITNPSDSPNTDGIDIISSR 226
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
V + ISTGDD ++VKSG + A S ITI + S GI++GSET G+
Sbjct: 227 QVHLHHLNISTGDDNISVKSGLAKR--ADDAESRDITIDHIQ-SENGHGISIGSETINGI 283
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA---GDVGDHPD 236
V + ++ G+ +K+ RG I + + +V M+ + + I G G +
Sbjct: 284 GKVTLQDLHFTGTENGVRIKSGRDRGANIGPVIIRNVTMQQVKTPLVITDSYGGNGGYSS 343
Query: 237 DKFNP-------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
D +P P ++ +T++ + + +G+I GL +P I L ++++ G
Sbjct: 344 DSVSPIKYQTLTTTTPNIHDVTLQHIEASGATHAGIISGLPEAPLKNIHLESVHITAKTG 403
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 141/318 (44%), Gaps = 42/318 (13%)
Query: 22 FLISKFEKISFIGENGTIDGQGA-IWWNMWRQ-----------------RTLPFT----R 59
L +S +G+ GTIDG G WW +Q +P R
Sbjct: 101 ILADHVHDVSIVGQ-GTIDGDGQQTWWAKAKQINALLHQGNDQLFKQEYSGVPIANGVPR 159
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LIEF + +++ + V+ N+P WN+ +V I + I P DSPNTDGID SS
Sbjct: 160 PWLIEFNDVQNVHLKGVLLTNAPMWNVVIRSSQDVNIDTIKIQNPKDSPNTDGIDIVSSQ 219
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
+ I D ISTGDD +++KSG + P+ ITI+ GI++GSET+ G+
Sbjct: 220 YIQISDVDISTGDDNISIKSGLQQ---GNALPARDITIKNSLMHDGH-GISIGSETANGI 275
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG--DVGDHPDD 237
V ++I+ GI +K+ RG I ITV + MEN I I V +
Sbjct: 276 GKVTIQNIHFSGSTNGIRIKSQRDRGNSIGPITVDHIQMENVTNPIVINASYSVNSYKKR 335
Query: 238 KFNP--------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 289
F + P+++ I + D+ S ++ GL + I L +I +Q G
Sbjct: 336 SFKEALKQKELTSLTPLIHDILLSDIHVVNADNSIILSGLPEAFIWNIVLDHIFMQAKHG 395
Query: 290 PTSPPLKCSDVSGSAYQV 307
LK V G +QV
Sbjct: 396 -----LKARYVQGVMHQV 408
>gi|315570522|gb|ADU33265.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 409
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 21/279 (7%)
Query: 23 LISKF--EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQN 80
LIS F IS G G +DG GA W + P TRP + F+ S+ +++ V +N
Sbjct: 116 LISAFGQRNISITGR-GMLDGSGAFWIKLLPP---PSTRPFFLYFVESQEVLLEGVHIKN 171
Query: 81 SPFWNIHPVYCSNVVIRYVTILAPADS----PNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
SP +N+H S++ I+ +TI P ++ PNTDGI+ D + + + ISTGDD +
Sbjct: 172 SPMYNVHFKDTSHITIKGITITNPENTVDPGPNTDGINCDPCRYLHVSNVTISTGDDAIV 231
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+K+ P+ + I +GI++GS T+GG+ N+ + GI
Sbjct: 232 MKADMRGRTSKQLKPTEHVLIENSFIFVGHAGISMGSATAGGLRNITVRNCLFNGTNRGI 291
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARK-GIKIAGDVGDHPDDKFNPNAL---------PV 246
++KT RGG + +I ++ M N RK G+ IA DV + D+ + + P
Sbjct: 292 YIKTARDRGGKVEDIHYHNITMLNIRKEGVAIA-DVYNGTDEGLHERNVYPQPVTENTPF 350
Query: 247 VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
+ I + + G +S I GL SP I + + +
Sbjct: 351 IGNIEFQGIRGNSKLESIFIVGLPESPVVNITFKDFSAK 389
>gi|351725093|ref|NP_001238104.1| polygalacturonase PG2 precursor [Glycine max]
gi|5669848|gb|AAD46484.1| polygalacturonase PG2 [Glycine max]
Length = 439
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 30/277 (10%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWN------------MWRQRTLPFTRPNLIEFMNSRSII 72
SK KI+ G+ G IDGQG++WWN + LP T+P + F S +
Sbjct: 128 SKLNKITIRGK-GVIDGQGSVWWNNDSPTYNPTEVMLESNGRLPSTKPTALRFYGSDGVT 186
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
++ + QNS ++ C+NV + +++ +P DSPNTDGI +S NV I S ++ GD
Sbjct: 187 VTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVIYSSTLACGD 246
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHIN 188
D +++++G S I + V P GI++GS T V NV +
Sbjct: 247 DCISIQTG-----------CSDIYVHNVN-CGPGHGISIGSLGRENTKACVRNVTVRDVT 294
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 248
+ N G+ +KT G G ++NI S+V + + I I D + N ++ V+
Sbjct: 295 IQNTLTGVRIKTWQGGSGSVQNIMFSNVQVSGVQIPILIDQYYCDGGKCR-NESSAVAVS 353
Query: 249 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
I ++ GT +Q N P TGI L I L+
Sbjct: 354 AIHYVNIKGTYTKQPIYFACSDNLPCTGITLDTIRLE 390
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 46/299 (15%)
Query: 32 FIGENGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSII 72
I G +DG+G WW + ++ L + RP I S+ +
Sbjct: 87 MISGKGKLDGRGETWWQTFWGTDEASGMMADYTKKGLRWAADYDCKRPRNILVYESQQVT 146
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++ S FWN Y +++I +TI P+TDGID DS V I+++YIS D
Sbjct: 147 IKDISSVQSGFWNTQITYSHHILIDGITI-DNGKGPSTDGIDIDSCEEVTIQNAYISCND 205
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +++K+G +A ITI+ SGIA+GSETSGG+E + + +
Sbjct: 206 DNISIKAGRGAEALAQQRSCRKITIKDCQLGYG-SGIAIGSETSGGIEEIKIQKVVFEQT 264
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENA-----------------RKGIKIAGDVGDHP 235
G G +K+ RGGFIR +T SD+ M++ A ++ D+
Sbjct: 265 GAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLLQTNWYPDYSYPELPADYAEEIPDYW 324
Query: 236 DDKFNPNALPV----VNGITIKDVWGTKVQQSGL----IQGLKNSPFTGICLSNINLQG 286
A+PV V ITI++V TK+ Q + I+ P + + N+++
Sbjct: 325 HKLMAQPAIPVGPAKVCDITIENVQATKIGQQSVRAFFIEASPAEPIRNLTMKNLSIHA 383
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 19/239 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ +++I + +NSPFW ++PV C++V + VT + PN+DG DP+
Sbjct: 231 YLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTF--SSHGPNSDGCDPE 288
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S ++V I++ TGDD +A+KSG + G S I I G+ +GSE S
Sbjct: 289 SCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHGGVVIGSEIS 348
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GGV NV ++ + ++ I +KTN RGG I +I + ++ + + I I G
Sbjct: 349 GGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEG 408
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGV 287
D G +F+ P+V I I ++ V L + G P I L+N + V
Sbjct: 409 DAG-----QFD----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTNSHFDQV 458
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 46/299 (15%)
Query: 32 FIGENGTIDGQGAIWWNM-------------WRQRTLPFT------RPNLIEFMNSRSII 72
I G +DG+G WW + ++ L + RP I S+ +
Sbjct: 87 MISGKGKLDGRGETWWQTFWGTDEASGMMADYAKKGLRWAADYDCKRPRNILVYESQQVT 146
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
I ++ S FWN Y +++I +TI P+TDGID DS V I+++YIS D
Sbjct: 147 IKDISSVQSGFWNTQITYSHHILIDGITI-DNGKGPSTDGIDIDSCEEVTIQNAYISCND 205
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +++K+G +A ITI+ SGIA+GSETSGG+E + + +
Sbjct: 206 DNISIKAGRGAEALAQQRSCRKITIKDCQLGYG-SGIAIGSETSGGIEEIKIQKVVFEQT 264
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENA-----------------RKGIKIAGDVGDHP 235
G G +K+ RGGFIR +T SD+ M++ A ++ D+
Sbjct: 265 GAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLLQTNWYPDYSYPELPADYAEEIPDYW 324
Query: 236 DDKFNPNALPV----VNGITIKDVWGTKVQQSGL----IQGLKNSPFTGICLSNINLQG 286
A+PV V ITI++V TK+ Q + I+ P + + N+++
Sbjct: 325 HKLMAQPAIPVGPAKVCDITIENVQATKIGQQSVRAFFIEASPAEPIRNLTMKNLSIHA 383
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 19/239 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RP I+ +++I + +NSPFW ++PV C++V + VT + PN+DG DP+
Sbjct: 231 YLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTF--SSHGPNSDGCDPE 288
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S ++V I++ TGDD +A+KSG + G S I I G+ +GSE S
Sbjct: 289 SCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHGGVVIGSEIS 348
Query: 177 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 229
GGV NV ++ + ++ I +KTN RGG I +I + ++ + + I I G
Sbjct: 349 GGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEG 408
Query: 230 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGV 287
D G +F+ P+V I I ++ V L + G P I L+N + V
Sbjct: 409 DAG-----QFD----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTNSHFDQV 458
>gi|351724723|ref|NP_001238091.1| polygalacturonase PG1 precursor [Glycine max]
gi|5669846|gb|AAD46483.1| polygalacturonase PG1 [Glycine max]
Length = 443
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 30/277 (10%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWN------------MWRQRTLPFTRPNLIEFMNSRSII 72
SK I+ G+ G IDGQG++WWN + LP T+P + F S +
Sbjct: 132 SKLNTITIRGK-GVIDGQGSVWWNNDSPTYNPTEVMLESNGRLPSTKPTALRFYGSDGVT 190
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
++ + QNS ++ C+NV + +++ +P DSPNTDGI +S NV I S ++ GD
Sbjct: 191 VTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVIYSSTLACGD 250
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHIN 188
D V++++G S I + V P GI++GS T V NV +
Sbjct: 251 DCVSIQTG-----------CSDIYVHNVN-CGPGHGISIGSLGRENTKACVRNVTVRDVT 298
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 248
+ N G+ +KT G G ++NI S+V + + I I D + N ++ V+
Sbjct: 299 IQNTLTGVRIKTWQGGSGSVQNIMFSNVQVSGVQTPISIDQYYCDGGRCR-NESSAVAVS 357
Query: 249 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
GI +V GT ++ N P +GI L I L+
Sbjct: 358 GIHYVNVKGTYTKEPIYFACSDNLPCSGITLDTIQLE 394
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F +P I +N +++I + + S FWN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 199 FYKPKTISPINCTNVLIEGITMERSTFWNVCPIYCENVIIRGITVNSIG-IPSGDGIDIE 257
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR G+ GSET+
Sbjct: 258 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQQGHGGVTCGSETA 317
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--IAGD---V 231
GGV+NV +GI KT R G + + + M N + K + G V
Sbjct: 318 GGVKNVYVHDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMINVGEAFKWDLLGSKRYV 377
Query: 232 GDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
G+ +++ P A+ P + I IK+ ++ + G+ P + + + N
Sbjct: 378 GELA-ERYPPRAVNKLTPTIKDIHIKNFIVESAEKILSVNGIPEIPCSNVLIEN 430
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 15/205 (7%)
Query: 33 IGENGTIDGQGAIWWNMWRQRTLPFT----------RPNLIEFMNSRSIIISNVIFQNSP 82
+ ++G + + + M ++ ++PF RP I ++I++ +P
Sbjct: 147 VQKDGKHTNEKTLLYEM-KEDSVPFDKRVFSGKSSIRPQFINLYKCKNILLEGFTINRAP 205
Query: 83 FWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 142
FW IHP+ NV IR V + + N DG DP+S +NV IE TGDD +A+KSG D
Sbjct: 206 FWLIHPLLSENVTIRKVKM--QSHGYNNDGCDPESCNNVLIEYCDFDTGDDCIAIKSGRD 263
Query: 143 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG--IHVKT 200
E G + PS I +R +G+A+GSE +GG NV E+ + + + I +K+
Sbjct: 264 EDGRFWNIPSENIIVRNCRMKDGHAGVAIGSEVTGGCRNVWVENCRMDSPELDRIIRIKS 323
Query: 201 NIGRGGFIRNITVSDVYMENARKGI 225
N RGG + N+ V ++++ ++ I
Sbjct: 324 NAIRGGEVENLFVRNIFVGECKESI 348
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 117/284 (41%), Gaps = 19/284 (6%)
Query: 26 KFEKISFIGENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPF 83
+ + GE GT+DG + WW + + + RP I R I I V+ +NSP
Sbjct: 190 ELRNVDIFGE-GTVDGNADRSDWWEEHKTKRGAW-RPRTIFLCRCRCIRIQGVLVRNSPS 247
Query: 84 WNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 143
W IHP Y + + VTI P DSPNTDG DP+S +V + IS GDD +A+KSG
Sbjct: 248 WTIHPYYTDGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKSGKAR 307
Query: 144 YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIG 203
S +R + +GSE + GV V A G+ +KT G
Sbjct: 308 MAGERRKASRNFALRNSILERGHGALTIGSEAAAGVYRVEASLCIFSGTDRGLRLKTRRG 367
Query: 204 RG--GFIRNITVSDVYMENARKGIKI----AGDVGDHPDDKFNPNALPVVNGIT--IKDV 255
RG F I + MEN D H + ALP VN +T I V
Sbjct: 368 RGPDCFYDEIYFHHIRMENVPMPFTFNMFYHCDADGHERYVQSQEALP-VNAMTPGIGAV 426
Query: 256 WGTKVQQSGL------IQGLKNSPFTGICLSNINLQGVAGPTSP 293
++ SG+ GL P I L I+ + P P
Sbjct: 427 RAENIRCSGVDSALLCAYGLPERPIGAILLRGIDAVFLEDPERP 470
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 34 GENGTIDGQGAIWWN----MWRQRTLPFT-----RPNLIEFMNSRSIIISNVIFQNSPFW 84
+N +I GQGA+ N M R F RP ++ + I +V QNSPFW
Sbjct: 111 ADNFSITGQGAVDGNVYAFMKRASRYYFNGDFYPRPTMVYVEHCNHISFHDVTLQNSPFW 170
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS--GWD 142
+HP C++V+I + +L P D N+DGIDPD S+NV I ++ DD + +K+ G +
Sbjct: 171 TLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTTAGNN 230
Query: 143 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNI 202
EYG P+ + I T +S + I +G+E EN+L ++ + G+ ++ I
Sbjct: 231 EYG-----PTKNVIISNCTLTSTSAAIKIGTEGVADFENILVDNCIITGTNRGLSIQ--I 283
Query: 203 GRGGFIRNITVSDVYMENAR 222
GG +RN++ S++ +E R
Sbjct: 284 RDGGCVRNVSFSNIMIETRR 303
>gi|30688821|ref|NP_850359.1| Polygalacturonase ADPG2 [Arabidopsis thaliana]
gi|226711460|sp|Q8RY29.2|ADPG2_ARATH RecName: Full=Polygalacturonase ADPG2; Short=AtADPG2; Short=PG
ADPG2; AltName: Full=Pectinase ADPG2; AltName:
Full=Protein ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2; Flags: Precursor
gi|330254946|gb|AEC10040.1| Polygalacturonase ADPG2 [Arabidopsis thaliana]
Length = 433
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 21/261 (8%)
Query: 34 GENGTIDGQGAIWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 90
G+ G +DG G WW + R + P T+ P + F NS+S+I+ N+ +N+ I
Sbjct: 163 GDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEK 222
Query: 91 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 150
CSNV + V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG
Sbjct: 223 CSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG---------- 272
Query: 151 PSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
S + I +T P GI++GS + V V + L G+ +KT G G
Sbjct: 273 -SQNVQINDIT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSG 330
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL- 265
NI ++ M+N + I I D D +A+ V N + +D+ GT ++ +
Sbjct: 331 TASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKN-VVYRDISGTSASENAIT 389
Query: 266 IQGLKNSPFTGICLSNINLQG 286
KN P GI L +N++G
Sbjct: 390 FNCSKNYPCQGIVLDRVNIKG 410
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 136/302 (45%), Gaps = 54/302 (17%)
Query: 20 SDFLI-SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIF 78
+DF+ SK ++ G +GTIDGQGA WW ++ + + RP +I N ++I V
Sbjct: 117 TDFISGSKLHDVAITG-SGTIDGQGAPWWPAYKDKGV--KRPRMIALQNCERLLIRGVTL 173
Query: 79 QNSPFWNI--HPVYCSNVVIRYVTILAPA-DSP-----NTDGIDPDSSSNVCIEDSYIST 130
N+P ++I +NV + VT+ APA D P NTD D S + + I+D IST
Sbjct: 174 MNAPMFHIAISGKATNNVTVDKVTVRAPASDDPLNPSHNTDACDV-SGNKILIKDCDIST 232
Query: 131 GDDLVAVKSGWDEYGI-----AYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 185
GDD G I YGH G+++GS T GGV N L E
Sbjct: 233 GDDNFTCGGGTSNVHIQNCKYGYGH-----------------GLSIGSYTKGGVSNFLIE 275
Query: 186 HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD-----KFN 240
+ N GI +K++ RGG ++N+T ++ MEN I I G + K
Sbjct: 276 DCSFTNTECGIRIKSDRDRGGVVQNLTYRNIKMENVGMPILIYGAYMAKEKEFRNLQKIT 335
Query: 241 P------------NALPVVNGITIKDVWGTKV--QQSGLIQGLKNSPFTGICLSNINLQG 286
P + PV IT +++ T +++GLI GL +P + I + +
Sbjct: 336 PEIAAGYAREPLTDLTPVYKDITFENITATTQNGKRAGLIWGLPEAPASNIVFKKVTITA 395
Query: 287 VA 288
A
Sbjct: 396 SA 397
>gi|255648183|gb|ACU24545.1| unknown [Glycine max]
Length = 443
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 130/277 (46%), Gaps = 30/277 (10%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWN------------MWRQRTLPFTRPNLIEFMNSRSII 72
SK I+ G+ G IDGQG++WWN + LP T+P + F S +
Sbjct: 132 SKLNTITIRGK-GVIDGQGSVWWNNDSPTYNPTEVMLESNGRLPSTKPTALRFYGSDGVT 190
Query: 73 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 132
++ + QNS ++ C+NV + +++ +P DSPNTDGI +S NV + S ++ GD
Sbjct: 191 VTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVVYSSTLACGD 250
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHIN 188
D V++++G S I + V P GI++GS T V NV +
Sbjct: 251 DCVSIQTG-----------CSDIYVHNVN-CGPGHGISIGSLGRENTKACVRNVTVRDVT 298
Query: 189 LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN 248
+ N G+ +KT G G ++NI S+V + + I I D + N ++ V+
Sbjct: 299 IQNTLTGVRIKTWQGGSGSVQNIMFSNVQVSGVQTPISIDQYYCDGGRCR-NESSAVAVS 357
Query: 249 GITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
GI +V GT ++ N P +GI L I L+
Sbjct: 358 GIHYVNVKGTYTKEPIYFACSDNLPCSGITLDTIQLE 394
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 80/140 (57%)
Query: 176 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
SGG+++V AE I + GI +KT +GRGG+ ++I V + M + + G+ G H
Sbjct: 2 SGGIQDVRAEDITAIHTESGIRIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSHA 61
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 295
D ++PNALP + GI +D+ +V +G ++G+ N FTGIC++N+ + A P
Sbjct: 62 DKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQPW 121
Query: 296 KCSDVSGSAYQVKPWPCSEL 315
CSDV G V P PC+ L
Sbjct: 122 TCSDVEGITSGVTPKPCNLL 141
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 33/285 (11%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWRQRTLP------------------------FTRPN 61
+ E ++ G+ GTIDG + WR + P + RP
Sbjct: 148 QVENVAITGK-GTIDGNAMTTFATWRPKQKPAQLLSRQQNHEEVPIVQRKFGQGQWLRPQ 206
Query: 62 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 121
LI+ S++I + V NSPFW IH + N++ R + A N DGIDP+ S N+
Sbjct: 207 LIQLYQSKNITLEGVKIINSPFWCIHLLKSENIICRRLRY--DAKLVNNDGIDPEMSRNI 264
Query: 122 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVEN 181
IED + + GDD VA+KSG D G P+ I IR + +GSE S GV N
Sbjct: 265 LIEDIHFNNGDDNVAIKSGRDNDGWHDACPAENIVIRNCHFKG-LHAVVIGSEMSAGVRN 323
Query: 182 VLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 240
V E+ + G+ +KTN RGGF+ ++ V++ + + + +
Sbjct: 324 VFVENCDYAGYCKRGVFIKTNPDRGGFVSHLFVNNCKFDEVEDLFYVTSRYAGEGQESMH 383
Query: 241 PNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 284
+ + + + KV+ + L+ QG P + + I +
Sbjct: 384 ---FSTIEHLYVDGLSARKVRAAALVLQGTSAKPVQHVSFNAIEV 425
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 125/285 (43%), Gaps = 28/285 (9%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWR----------------QRTLPFT----RPNLIEF 65
K I+ G+ GT+D G WN + +R +P + R +E
Sbjct: 151 KESNIAVTGQ-GTLDAAGTASWNKGKDREYLESLVAKGIPPERRIVPGSGHTMRSTFVEP 209
Query: 66 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 125
+ +++I + +N FW +HP C NV I V A NTD DP+S +V I +
Sbjct: 210 YSCDTVLIQGITLKNPMFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVN 269
Query: 126 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 185
S++ DD +A+KSG D G G P I + + I GSE +GG+ +V A
Sbjct: 270 SHLGAHDDNIALKSGRDADGRRVGVPCRNIVVANCVMDGNWGAITCGSEQTGGIRDVYAY 329
Query: 186 HINLY-NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 244
+ + G++VK+N RGGF N+ + V R + + D + +
Sbjct: 330 KLTVTGETKYGLYVKSNTLRGGFTENVNLDSVSGTFGRSVVYVLPDYNGQTGEY-----V 384
Query: 245 PVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVA 288
P T+ + GT+ Q+ ++GL NS G+ + + GVA
Sbjct: 385 PRFGPFTLGNSTGTRCGQAAFDVRGLPNSHVRGLRVRDCRFDGVA 429
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 48/304 (15%)
Query: 28 EKISFIGENGTIDGQGAIWWNMW-------------RQRTLPFT------RPNLIEFMNS 68
+K I NGTIDGQG WW + ++ L + R + M S
Sbjct: 99 QKDVIISGNGTIDGQGEYWWRKYWGDDGKSGMRGEYDKKGLRWACDYDCMRVRNVVIMES 158
Query: 69 RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSPNTDGIDPDSSSNVCIEDSY 127
I + ++ S FWNIH Y ++ + + I + +SP+TDGID DS +V +E+
Sbjct: 159 SRITLKDITSMRSGFWNIHICYSDHIHVDGIKIASCGGESPSTDGIDIDSCHDVLVENCV 218
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 187
DD + +KSG D GI P IT++ + F G+ +GSE SGGV + +++
Sbjct: 219 TDCNDDSICIKSGRDADGIRVNRPCHDITVQNCEIRAGF-GVTIGSEVSGGVYQITLKNL 277
Query: 188 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----------------AGD 230
+ G +K+++ R G+IR++ V + M N + G+
Sbjct: 278 RYHGTDCGFRIKSSVARHGYIRDVRVEGLSMVNVKYPFHFFLNWNPAYSYCELPGDYEGE 337
Query: 231 VGDHPDDKFN--PNALP--VVNGITIKDVWGTK------VQQSGLIQGLKNSPFTGICLS 280
+ +H P+++P V+ ITI++V + ++ I+G ++ P +
Sbjct: 338 IPEHWKKLLEAIPDSVPKTKVSNITIENVTARNEADYNGISRAFHIEGFEDQPVEHVIFK 397
Query: 281 NINL 284
N++L
Sbjct: 398 NVSL 401
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 100/171 (58%), Gaps = 10/171 (5%)
Query: 12 SNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSI 71
+A++R S F E + F GE G I+G+G WW Q L F RP L + + ++
Sbjct: 112 KDALYR--SVFYGENVENVVFTGE-GLINGEGVNWWTRNSQ-NLKFERPRLFQCLFCKNF 167
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
I + ++NSPFW IH VY N+ I V ILA +S NTDGID DSSSNV I D ++ G
Sbjct: 168 KIEKLTWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDGIDIDSSSNVHIHDVFVDVG 227
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF--SGIAVGSETSGGVE 180
DD++A+KSG+D G +G P+ + + +S F A+GSE SGGV+
Sbjct: 228 DDVIALKSGFDFCGREFGMPTKNVLVE----NSVFINENFAIGSEMSGGVQ 274
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 22/202 (10%)
Query: 34 GENGTIDGQGAIWWN----MWRQRTLPFT-----RPNLIEFMNSRSIIISNVIFQNSPFW 84
+N +I GQGA+ N M R F RP ++ + I +V QNSPFW
Sbjct: 111 ADNFSITGQGAVDGNVYAFMKRASRYYFNGDFYPRPTMVYVEHCNHISFHDVTLQNSPFW 170
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK--SGWD 142
+HP C++V+I + +L P D N+DGIDPD S+NV I ++ DD + +K +G +
Sbjct: 171 TLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTTAGNN 230
Query: 143 EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH--INLYNVGVGIHVKT 200
EYG P+ + I T +S + I +G+E EN+L ++ I N G+ I ++
Sbjct: 231 EYG-----PTKNVIISNCTLTSTSAAIKIGTEGVADFENILVDNCIITGSNRGLSIQIRD 285
Query: 201 NIGRGGFIRNITVSDVYMENAR 222
GG +RN++ S++ +E R
Sbjct: 286 ----GGCVRNVSFSNIMIETRR 303
>gi|356503131|ref|XP_003520365.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At3g15720-like [Glycine max]
Length = 472
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 130/294 (44%), Gaps = 33/294 (11%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS 81
+IS ++ G G IDG G+ WW ++ P RP+++ + S+ ++N+ NS
Sbjct: 199 IMISNVNGLTIDGSGGLIDGYGSAWWAC---KSCP--RPSVLIINSCNSVSVTNLNMINS 253
Query: 82 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 141
P +IH C ++ I AP DSPNTDG D +S N+ IEDS I+TGDD +A+ SG
Sbjct: 254 PKSHIHVNGCEGATFSHINISAPGDSPNTDGFDISTSKNIMIEDSTIATGDDCIAI-SGG 312
Query: 142 DEY----GIAYGHPSSGITIRRVTGSSPFSGIAVGS--ETSGGVENVLAEHINLYNVGVG 195
Y GIA G P GI++GS + V+ V + + G
Sbjct: 313 SSYINVTGIACG---------------PGHGISIGSLGKKFDTVQEVYVRNCSFIRTTNG 357
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
+KT G+ + IT D+ +E R I I + D + V+ +T + +
Sbjct: 358 ARIKTFPNGMGYAKQITFEDITLEQTRNPIIIDQEYRDLTNQAVE------VSDVTYRGI 411
Query: 256 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 309
GT + + S GI L IN+ S C++ G+A P
Sbjct: 412 HGTSLDGRAITLDCGESGCYGIVLDQINIVSCLTGKSASCFCNNAHGTATATNP 465
>gi|356503135|ref|XP_003520367.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 452
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 25/290 (8%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNS 81
+IS ++ G G IDG G+ WW ++ P RP+++ + S+ ++N+ NS
Sbjct: 179 IMISNVNGLTIDGSGGLIDGYGSAWWAC---KSCP--RPSVLIINSCNSVSVTNLNMINS 233
Query: 82 PFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW 141
P +IH C ++ I AP DSPNTDG D +S N+ IEDS I+TGDD +A+ G
Sbjct: 234 PKSHIHVNGCEGATFSHINISAPGDSPNTDGFDISTSKNIMIEDSTIATGDDCIAISGG- 292
Query: 142 DEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS--ETSGGVENVLAEHINLYNVGVGIHVK 199
SS I + + P GI++GS + V+ V + + G +K
Sbjct: 293 ----------SSYINVTGI-ACGPGHGISIGSLGKKFDTVQEVYVRNCSFIRTTNGARIK 341
Query: 200 TNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTK 259
T G+ + IT D+ +E R I I + D + V+ +T + + GT
Sbjct: 342 TFPNGMGYAKQITFEDITLEQTRNPIIIDQEYRDLTNQAVE------VSDVTYRGIHGTS 395
Query: 260 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKP 309
+ + S GI L IN+ S C++ G+A P
Sbjct: 396 LDGRAITLDCGESGCYGIVLDQINIVSCLTGKSASCFCNNAHGTATATNP 445
>gi|242088669|ref|XP_002440167.1| hypothetical protein SORBIDRAFT_09g027150 [Sorghum bicolor]
gi|241945452|gb|EES18597.1| hypothetical protein SORBIDRAFT_09g027150 [Sorghum bicolor]
Length = 408
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 22/278 (7%)
Query: 37 GTIDGQGAIWW--NMWRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 91
GTIDG G WW R++T P RP + F R + + V QN+ + + C
Sbjct: 130 GTIDGMGQQWWASTCKRKKTQPCYSGPRPKAVHFEECRGVSVQGVTLQNAQQFQLTFTRC 189
Query: 92 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 151
S V ++ ++APADSPNTDGI + +S+V I D+ ISTGDD V++
Sbjct: 190 SCVKASFLRVIAPADSPNTDGIHLNDTSHVHITDNLISTGDDCVSMVGN----------- 238
Query: 152 SSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
S + ++ ++ P GI++GS T+ VENV + L N G+ +K+ G GF
Sbjct: 239 CSDVHVKDIS-CGPGHGISIGSLGKNRTTDMVENVRVDTCLLTNTTNGVRIKSWQGGMGF 297
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
R++ ++ M+N I + D P N V + ++ GT +
Sbjct: 298 ARDLRFENILMKNVSNPIIVDQYYCDQPTPCANQTQAVEVRKVEFANIRGTSATAQAISI 357
Query: 268 GLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSA 304
++ P + L+N+NL G C SG +
Sbjct: 358 ACSDTVPCRELELANVNLTLAEGGGRATALCYRASGKS 395
>gi|365122655|ref|ZP_09339556.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642403|gb|EHL81761.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
Length = 427
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 130/262 (49%), Gaps = 26/262 (9%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY---CSN 93
G I+G G+ WW +R R LI F N R+I I + QN+P N+H S+
Sbjct: 138 GVIEGDGSAWWTAFRANR-SIKRGCLIRFDNCRNIEICGIRLQNAP--NVHITLGRGSSD 194
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
+ +R +TI AP ++PN+DGID + NV I + I+ GDD +A+ SG +
Sbjct: 195 ITVRDITIEAPDEAPNSDGIDV-WAPNVLIYNCNIACGDDNIAMDSG-----------TK 242
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 213
ITIR+ + G ++GS T+G +ENVL + + N I +K+N RGG +NI
Sbjct: 243 NITIRKCNFGNGH-GCSIGSYTAG-IENVLVDSCSFKNTESAIRMKSNRSRGGGEKNIIY 300
Query: 214 SDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV------NGITIKDVWGTKVQQSGLIQ 267
S++ ++N RK I I P D +A V N I ++++ + +G+I
Sbjct: 301 SNITIDNVRKPIFITSYYPKTPKDVTEDSAEEVTVTTPSWNNIFLRNIEIYDCEYAGIIW 360
Query: 268 GLKNSPFTGICLSNINLQGVAG 289
G+ P + N+ ++ G
Sbjct: 361 GVPELPIRNVVFDNVKIRATKG 382
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 52 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 111
Q+ P P I M S++++I + S W I VY N V+ V ++ +T
Sbjct: 167 QKAAPQLLPMFISLMESKNVLIQGIHIVGSAMWPIQLVYDDNAVVSGV-MVETFGGHDTG 225
Query: 112 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 171
GI DSS NV I D YI TGDD + +KSG D G P+ I+I + +
Sbjct: 226 GIYVDSSRNVRISDCYIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGAVVL 285
Query: 172 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 231
GSE SG + N++A +I +G+ +KT GRGG I ++ + M+N +GI I+
Sbjct: 286 GSEISGWIRNLVASNITCDGTQMGVRIKTRRGRGGGIEDVRFDNWTMQNVARGINISSFY 345
Query: 232 GDHPDDKFNPNALPVVNGITIKD---VWGTKVQQSGL---IQGLKNSPFTGICLSNINLQ 285
P++K P PV +I + + S L I+G+ P G+ +S+I
Sbjct: 346 VMAPENKSTPPEEPVSERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRISDI--- 402
Query: 286 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 322
+ + + AY K + S +TG
Sbjct: 403 ---------VATAQIGMKAYNTKAMELHNVQLSAKTG 430
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQG--AIWWNMWRQRTLPFTRPNLIEFMN 67
W N + + S + + IG GTIDG + WW + + + RP + +
Sbjct: 171 WEGNPLNCYASLITAIDAQNLDIIGP-GTIDGNAGNSDWWVNAKVKRGAW-RPFAMYLVR 228
Query: 68 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 127
+ + + NV QNSP W +HP Y ++ + I P+DSPNTDG+DP+S NV + +
Sbjct: 229 CQKVRVQNVRVQNSPCWTVHPYYSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTT 288
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 187
IS GDD +A+KSG + + + I IR + VGSE +GGV+NV
Sbjct: 289 ISVGDDCMAIKSGKFYMSMEHHKVTENIIIRNCRFERGHGSVTVGSEVAGGVKNVRVTQC 348
Query: 188 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
G+ +KT GRG + D+ EN
Sbjct: 349 IFDGTDRGLRIKTRRGRG---ERSVLDDILFEN 378
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 597 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 655
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 715
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 716 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 775
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 776 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 63/96 (65%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
R+ S + + G NGTIDGQGA WW + ++ L +TRP LIE M S I ISN+
Sbjct: 148 RYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKKLKYTRPYLIELMFSDQIQISNL 207
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 112
NSP WN+HPVY SN++I+ +TI+AP SPNTDG
Sbjct: 208 TLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDG 243
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F P I +N ++ I + S WN+ P YC NV+IR +T+ + + P DGID +
Sbjct: 202 FQPPRTIAPINCTNVFIEGITMNRSALWNVVPTYCENVIIRGITVNS-LEIPRGDGIDIE 260
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS NV IE ++T DD +KSG E G+ G P++ + IR ++ GI GSET+
Sbjct: 261 SSKNVLIEYCTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIRHSLATNGPGGITCGSETA 320
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--------IA 228
G ++N+ A GI KT RGG N+ + M + + K
Sbjct: 321 GNIKNIYAHDCVFKGTMTGILFKTRRPRGGGTENVLYERIRMIDVKDAFKWELLGSKRWV 380
Query: 229 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
G++ D + + PVV I ++D I + T IC+ + L+ V
Sbjct: 381 GELADRMPLRAINSLTPVVRNIHVRD----------FIVESSDRMITAICIPEVPLRNV 429
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
Query: 37 GTIDGQGAIWWN-MWRQR-------TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHP 88
GTI+G G +W W +R + RP L+ NS+++ IS V NSPFW H
Sbjct: 642 GTINGNGMRYWKSFWLRREVNPKCTNMDELRPRLLYVSNSKNVQISGVRLINSPFWTTHF 701
Query: 89 VYCSNVVIRYVTILAPAD---SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 140
C + + + I +P +P+TDG+D D +NV I++ YIS DD +A+K G
Sbjct: 702 YKCEQLRLLNLHITSPTSPVHAPSTDGVDIDVCTNVLIKNCYISVDDDGIALKGG 756
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +I+I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 272 FYRPKTISPINCTNILIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 330
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 390
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 391 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 450
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 451 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 37 GTIDGQGAIWWNMW-------RQRTL------------PFTRPNLIEFMNSRSIIISNVI 77
G IDG G +WW + QR + RP + F ++ IS++
Sbjct: 112 GVIDGNGPVWWERYWGTDQKGGQRKIYDAKNLRWIVDYEVKRPREVLFYRCKNCAISDLT 171
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
S FWN YC + + ++T+ + P+TDGID DSSS V + + +S GDD + V
Sbjct: 172 LMRSGFWNCQLTYCQQMEVSHLTV-KENNGPSTDGIDIDSSSYVRVHNCELSCGDDCIVV 230
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
KSG D G+ P++ I I S + G+ +GSE S G+ +V + N G
Sbjct: 231 KSGRDGDGLRVNQPAAHIEIDHCIIHSGY-GVTLGSEVSAGISDVHIHDMIFENTDCGFR 289
Query: 198 VKTNIGRGGFIRNITVSDVYMENAR 222
+K++ RGG I+N+ + M N +
Sbjct: 290 MKSSADRGGVIKNVVAEHLEMHNVQ 314
>gi|2459815|gb|AAC28905.1| polygalacturonase 4 [Solanum lycopersicum]
Length = 387
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 27/270 (10%)
Query: 26 KFEKISFIGENGTI-DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
KFEK++ + G I DGQGA W + + F NS +I++S V QNS +
Sbjct: 106 KFEKVNRVSIYGGIFDGQGASLWACKNSKKNCPKGTTALAFYNSNNIVMSGVTVQNSQMF 165
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG---- 140
+I C N +I+ V +L+P +SPNTDGI SSS V I +S I TGDD +++ G
Sbjct: 166 HILVDGCHNAMIQGVKVLSPGNSPNTDGIHVQSSSGVSIMNSNIGTGDDCISIGPGNSNL 225
Query: 141 WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGI 196
W E GIA G P GI++GS GV+NV + ++ + G+
Sbjct: 226 WIE-GIACG---------------PGHGISIGSLGWESQEQGVQNVTVKMVSFTSTENGV 269
Query: 197 HVKT-NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
VKT GF+RN+ + M N + I I + + + N + ++ +T +D+
Sbjct: 270 RVKTWARPSNGFVRNVLFQHIVMSNVQNPIIIDQNYCPNHESCPNQGSGVKISDVTYEDI 329
Query: 256 WGTKVQQSGL-IQGLKNSPFTGICLSNINL 284
GT + + + K +P +GI L ++NL
Sbjct: 330 HGTSATEIAVKLDCSKTNPCSGITLEDVNL 359
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWN-MWRQRTLPFTR------------PNLIEFMNSRSIIIS 74
+K + I GTIDG G ++W+ W R TR P LI+ NS + +S
Sbjct: 126 QKNAEITGEGTIDGDGKVFWDGYWSLRKDYDTRGIRWAADYDSKRPRLIQVFNSSQVKLS 185
Query: 75 NVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGD 132
++ + S FW +H Y +V + +TI P+TDGID DSS V ++ + I+ D
Sbjct: 186 GLMLRRSGFWTVHICYSHDVTLDGLTIRNNEGGRGPSTDGIDIDSSKKVLVQHADIAVND 245
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN-LYN 191
D + +K+G D G+ P+ I +R +G+ +GSETSGG N+ A + L
Sbjct: 246 DALCLKAGRDSDGLRVNRPTEDIVLRDSVIRDGAAGVTIGSETSGGFRNIEAYGLTVLKQ 305
Query: 192 VGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
V VGI K+ RGG+ N+ D+ M +
Sbjct: 306 VPVGILFKSARTRGGWGENLRFHDITMTD 334
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 134/296 (45%), Gaps = 34/296 (11%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNV 76
L D+L + + E TI G+ RP L+ N +++ IS +
Sbjct: 247 EHLKDYLAEHLDLVESCDEEDTIPGR---------------VRPRLVNLSNCQNVWISGL 291
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
++SP W + +Y N+V + + N DG DPDSS+N + S + TGDD VA
Sbjct: 292 TLKDSPSWILQMIYSDNIVTDHCAFHSEG-IWNGDGWDPDSSTNCTLFASELYTGDDSVA 350
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 196
+KSG + G A G PS+ I I S G+ +GSE SGGVE+V +L N G+
Sbjct: 351 IKSGKNPEGNAIGRPSAHIYIFDCRVGSG-QGLCIGSEMSGGVEDVQIWDCDLENSFSGL 409
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVN-----GIT 251
+K RGG++R +TV D K ++ + DD + +PV+ G+T
Sbjct: 410 EIKATAKRGGYVRGVTVRDC------KAPRVMIHAVPYNDDGEAADTVPVLEHFTFAGLT 463
Query: 252 IKDVWGTKVQQSGLIQGLKNSPFTGI--CLSNINLQGVA----GPTSPPLKCSDVS 301
+ Q+ + ++ + F G L ++N G+ P P CSDV+
Sbjct: 464 LTGRALNSKQEWKDVSPVELAGFEGPNGTLRDVNFDGLTITAKAPRLPLQYCSDVT 519
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
+ RPN IEF +++ + + N+PFW IHP+ ++V++ + I + PN DG DP+
Sbjct: 215 YLRPNFIEFFECKNVHLKDFKIVNAPFWIIHPIKSNHVIVDGIHI--ESHGPNNDGCDPE 272
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV I + TGDD +A+K+G D G S I I+ G+ +GSE S
Sbjct: 273 YSKNVIIRNCTFDTGDDCIAIKAGRDSDGRRVAIKSENILIQNCKMFDGHGGVTIGSEIS 332
Query: 177 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 231
GV NV E+ ++ + I +K+N RGG I NI V ++ + ++ GI + V
Sbjct: 333 AGVSNVFVENCIMDSPELDRAIRIKSNTRRGGIIENIYVRNITVGEVKESVLGIDLHYGV 392
Query: 232 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 288
+ F +P+V I I++ + ++ GL G+ G +SNI + V
Sbjct: 393 HGNQTGTF----MPIVRNIFIEN---STIKNGGL-YGILAKGHPGFPISNIRFKEVT 441
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 597 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 655
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 715
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 716 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 775
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 776 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 597 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 655
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 715
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 716 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 775
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 776 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|356553680|ref|XP_003545181.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 402
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 129/282 (45%), Gaps = 35/282 (12%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G IDG G++WWN + ++ +RP + N ++ ++ NS +I ++ I
Sbjct: 132 GQIDGSGSVWWNSCKVKSC--SRPTALSIQNCNNLQLTGTRHLNSARNHISINNSNHTHI 189
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
VTI AP DSPNTDGID SS + I+ S I+TGDD +A+KSG I +GIT
Sbjct: 190 FNVTITAPQDSPNTDGIDVSQSSYILIQRSTIATGDDCIAMKSGTSYVNI------TGIT 243
Query: 157 IRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
P GI+VGS G VE+V + N G+ +KT G G+ RNI
Sbjct: 244 C------GPGHGISVGSLGKKGTCQTVEHVHVNNCNFKGADNGMRIKTWPGGCGYARNIK 297
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL--- 269
+ + N + I I D + ++ + ++G+T + V GT ++ +I
Sbjct: 298 FEHILLTNTKNPIIIDQDYENVQNEDKKQTSEVQISGVTYRCVNGTSNSETAIILNCGAG 357
Query: 270 --------------KNSPFTGICLSNINLQGVAGPTSPPLKC 297
S + + S N GVA TSPP+ C
Sbjct: 358 AGCTDIFMDVVNITSTSSGSNVHASCNNAHGVAASTSPPVSC 399
>gi|350535050|ref|NP_001233917.1| abscission polygalacturonase precursor [Solanum lycopersicum]
gi|1575707|gb|AAB09576.1| abscission polygalacturonase [Solanum lycopersicum]
Length = 387
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 27/270 (10%)
Query: 26 KFEKISFIGENGTI-DGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
KFEK++ + G I DGQGA W + + F NS +I++S V QNS +
Sbjct: 106 KFEKVNRVSIYGGIFDGQGASLWACKNSKKNCPKGTTALAFYNSNNIVMSGVTVQNSQMF 165
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG---- 140
+I C N +I+ V +L+P +SPNTDGI SSS V I +S I TGDD +++ G
Sbjct: 166 HILVDGCHNAMIQGVKVLSPGNSPNTDGIHVQSSSGVSIMNSNIGTGDDCISIGPGNSNL 225
Query: 141 WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGI 196
W E GIA G P GI++GS GV+NV + ++ + G+
Sbjct: 226 WIE-GIACG---------------PGHGISIGSLGWESQEQGVQNVTVKMVSFTSTENGV 269
Query: 197 HVKT-NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
VKT GF+RN+ + M N + I I + + + N + ++ +T +D+
Sbjct: 270 RVKTWARPSNGFVRNVLFQHIVMSNVQNPIIIDQNYCPNHESCPNQGSGVKISDVTYEDI 329
Query: 256 WGTKVQQSGL-IQGLKNSPFTGICLSNINL 284
GT + + + K +P +GI L ++NL
Sbjct: 330 HGTSATEIAVKLDCSKTNPCSGITLEDVNL 359
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 17/210 (8%)
Query: 28 EKISFIGENGTIDGQGAIWWN-MWRQRT------------LPFTRPNLIEFMNSRSIIIS 74
+K + I GTIDG G I+W+ W R RP L++ NS I I
Sbjct: 121 QKDAVITGEGTIDGDGKIYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIG 180
Query: 75 N-VIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTG 131
++ + S FW +H Y ++V +TI P+TDGID DSS ++ + + I+
Sbjct: 181 GGLLLRRSGFWTLHICYSTDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVN 240
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLY- 190
DD + +K+G D G+ P+ + +R T +G+ GSETSGG N+ A ++ ++
Sbjct: 241 DDALCLKAGRDSDGLRVNRPTEDVVLRDSTIRDGAAGVTFGSETSGGFRNIEAYNLKVFG 300
Query: 191 NVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+V VGI K+ RGGF N+ + D+ + +
Sbjct: 301 HVPVGILFKSAHTRGGFAENVRIHDLTLTD 330
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 597 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 655
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 715
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 716 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 775
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 776 GELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMN 67
W N + F + E + GE G +DG + WW +++ + + RPN + N
Sbjct: 173 WEGNPLDCFAALITGLSVENVLIYGE-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHN 230
Query: 68 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 127
++I + + NSP W +HP Y N++ TI+ P +SPNTDG+DP+S NV I +
Sbjct: 231 CKNIAMQGLCIMNSPSWTLHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGAD 290
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 187
IS GDD +A+KSG + + P+ I IR + +GSE + GV +V E++
Sbjct: 291 ISVGDDCIAIKSGKYYMALRHYKPAKNIVIRNSIFRKGHGSVTIGSEVAAGVYDVSVENV 350
Query: 188 NL 189
L
Sbjct: 351 YL 352
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P I +N ++I+I + + +PFWN+ P+YC NV+IR +T+ + P DGID +SS
Sbjct: 226 PMFISPINCKNILIEGISLERTPFWNVVPIYCENVIIRGITVNS-VGIPRGDGIDIESSK 284
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE +S GDD +K+G E G+ P+ + +R GI VGSET+ +
Sbjct: 285 NVLIEYCTLSCGDDCFTMKAGRGEDGLRVNKPTENVVVRFCLAKEGHGGITVGSETAAKI 344
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGG 206
N+ + GVGI KT RGG
Sbjct: 345 NNLYVHDTVFDDTGVGIRFKTRRPRGG 371
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 116/242 (47%), Gaps = 19/242 (7%)
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P L+EF + R++++ +V Q + W+ HPVYC NV R VT+ + A DGID DS
Sbjct: 193 PALMEFTHCRNVLVQDVFTQGNDMWSTHPVYCENVTFRNVTVHSGA-----DGIDVDSCK 247
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSETSGG 178
V I+ T DD +++KSG G G I I T + ++ I +GSETSGG
Sbjct: 248 GVVIDGCEFVTRDDCISLKSGRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSETSGG 307
Query: 179 VENVLAEHINLYNVGV-GIHVKTNIGRGGFIRNITVSDVYMENARKG---IKIAGDVGDH 234
+ NV EH I++K+ GRG FI +I ++D+ + A++G I
Sbjct: 308 IRNVHVEHCKCLGARTFAIYIKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNSGLQD 367
Query: 235 PDDKFNPNALPVV-----NGITIKDVW----GTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
PD + +P + + I +KDV G + ++G + TG C I L
Sbjct: 368 PDPVPGDDGIPTIRNFHFSNIRVKDVPVLVDGASIHPRKPLEGFSLTNVTGTCGKGIRLA 427
Query: 286 GV 287
+
Sbjct: 428 NI 429
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 272 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 330
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 390
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 391 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 450
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 451 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 46 WWNMWRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 104
WW+ W + T R F+++ + +S + +NSP W +HPV C ++ +TI
Sbjct: 207 WWS-WPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCKGLIAADLTIEND 265
Query: 105 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 164
DSPNTDG +P+SSS++ + +IS GDD +A+K+G P+ + I
Sbjct: 266 PDSPNTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPTEHVRIENCLMER 325
Query: 165 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
+ +GSE S G+ ++ + + G+ +KT GRGG + +I +SD ME+
Sbjct: 326 GHGAVVIGSEMSAGISDIAIRNCHFKGTDRGLRIKTRRGRGGLVADIRLSDSLMED 381
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 207 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 265
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 266 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 325
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 326 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 385
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 386 GELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 438
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 47 WNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 106
WN R P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ + V + P
Sbjct: 228 WNEIR----PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITVNNVKVFNPWY 283
Query: 107 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 166
S N D +D +S N I +S GDD + +KSG D G G P + ++
Sbjct: 284 SQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIVLHGH 343
Query: 167 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
G VGSE SGGV+N+ VG+ K+ GRGG +
Sbjct: 344 GGFVVGSEMSGGVKNIYVTDCTFMGTDVGLRFKSTRGRGGVVE 386
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 272 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 330
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 390
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 391 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 450
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 451 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 175 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 233
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 234 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 293
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 294 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 353
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 354 GELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 406
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 15/245 (6%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G IDG+G W + +PF RP L+ F + IS + N W +H +Y +
Sbjct: 810 EGVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTN 863
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
I + I A P++DGID DSS+++ I + I DD +++KSG DE G G PS
Sbjct: 864 GFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPS 923
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNI 211
I I + G+A+GSE SGG+ NV + N + K+ RGG + NI
Sbjct: 924 ENILIENCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENI 983
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSGLIQGL 269
T D+ ++ AR I + P +P P+ + I K++ G + Q +G + G
Sbjct: 984 TFEDITIKGARSIFDINMEWRMVP--PLSPAHYPLTCLRNIHFKNING-EAQSAGTMYGF 1040
Query: 270 KNSPF 274
K +PF
Sbjct: 1041 KEAPF 1045
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 59/314 (18%)
Query: 23 LISKFEK--ISFIGENGTIDGQGAIWWN-MWRQRTL------------PFTRPNLIEFMN 67
L++ +E+ + GE GTIDG G ++W W +R + RP LI+ N
Sbjct: 166 LLNVYEQADVHIYGE-GTIDGNGMVFWQTFWDKRNVYEGKGLRWAADYDAERPRLIQVYN 224
Query: 68 SRSIIISN-VIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIE 124
S+ I + + + + FW + VY ++V + V I +D P+TDGID DSS +V +E
Sbjct: 225 SKRIELGGGLHMKRAGFWTLQIVYSNDVKVSNVVIRNNSDGKGPSTDGIDIDSSHHVLVE 284
Query: 125 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 184
+ I DD + +K+G D G+ P+ + IR +G+ GSETSG + N
Sbjct: 285 KADIDVNDDALCLKAGRDADGLRVNRPTEHVVIRDSIIRHAEAGVTFGSETSGSIRN--- 341
Query: 185 EHINLYNVGV------GIHVKTNIGRGGFIRNITVSDVYMENARKGIKI----------- 227
I++YN+ V GI K+ RGG + +I + D+ ++NA +++
Sbjct: 342 --IDVYNLDVQGPVYSGIFFKSAHVRGGTVSDIRIRDMKVQNAEAAVRVDLNWLPVYSYP 399
Query: 228 -----AGDVGDH--------PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 274
+V +H P +K +P + I I ++ + + L+QG +P
Sbjct: 400 VIPPGIKNVPEHWKILATPVPKEK----GMPKLRDIHISNI-KAEANAAFLMQGYAEAPL 454
Query: 275 TGICLSNINLQGVA 288
+ SN+++ A
Sbjct: 455 QNVHFSNMHITAAA 468
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 37 GTIDGQGAIWW--NMWR-------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
GT+ +G +W+ N+ T RP+L+ F + ++++ V NSP ++I
Sbjct: 180 GTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVKGVTLLNSPKFHII 239
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P C+NVVI +T+ P ++ N D ID S V I ++ I GDD + +K+G G+
Sbjct: 240 PTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVNNVIDAGDDGICMKAGAGAKGVE 299
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
YG P + + I T + G +GSE SGG++N++ G+ K+ + RGG
Sbjct: 300 YG-PVANVLIENNTVYNAHGGFVIGSEFSGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGK 358
Query: 208 IRNITVSDVYMENAR 222
NI +SD+YM + +
Sbjct: 359 TENIFISDIYMTDIK 373
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 126/288 (43%), Gaps = 37/288 (12%)
Query: 36 NGTIDGQGAIWWNM-WRQRTLPFT-------------RPNLIEFMNSRSIIISNVIFQNS 81
GT+DG G IWW++ W+ R + RP LI+ S+ + + ++ +
Sbjct: 121 KGTVDGDGKIWWDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRP 180
Query: 82 PFWNIHPVYCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 139
FW +H Y V + +TI D P+TDGID DSSS+V + I DD + +K+
Sbjct: 181 GFWTVHICYSERVTVDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKA 240
Query: 140 GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYN-VGVGIHV 198
G D G+ P+ + I +G+ +GSETSGG+ ++ +H+ + + V GI
Sbjct: 241 GRDADGLRVNLPTERVRITDNVVRGGAAGVTIGSETSGGIRHIEVDHLTVMSAVPAGILF 300
Query: 199 KTNIGRGGFIRNITVSDVYM-------------ENARKGIKIAGDVGDHPD-----DKFN 240
K+ RGG I +I + +V A K+ V D PD +
Sbjct: 301 KSASTRGGTIEDIAIRNVITVGVATPVSITLNWNPAYSYAKLPEGVKDMPDYWRVLTEVV 360
Query: 241 P--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
P +P + I V T Q++ + SP +I+++
Sbjct: 361 PPGKGIPHFRDVRISRVKSTGAQRAFAVSSYAESPLVDFQFKDIDIEA 408
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 37 GTIDGQGAIWW--NMWR-------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
GT+ +G +W+ N+ T RP+L+ F + ++++ V NSP ++I
Sbjct: 180 GTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVKGVTLLNSPKFHII 239
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P C+NVVI +T+ P ++ N D ID S V I ++ I GDD + +K+G G+
Sbjct: 240 PTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVNNVIDAGDDGICMKAGAGAKGVE 299
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
YG P + + I T + G +GSE SGG++N++ G+ K+ + RGG
Sbjct: 300 YG-PVANVLIENNTVYNAHGGFVIGSEFSGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGK 358
Query: 208 IRNITVSDVYMENAR 222
NI +SD+YM + +
Sbjct: 359 TENIFISDIYMTDIK 373
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 33 IGENGTIDGQGAIWWN-------MWRQRTLPFT------RPNLIEFMNSRSIIISNVIFQ 79
I +GT+DG G WW+ + R L + RP LIEF S+ + ++ +
Sbjct: 130 ITGSGTVDGNGKYWWDGYWALRKQYDLRGLRWAADYDDRRPRLIEFYQSQHVSLAGLHLL 189
Query: 80 NSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
SPFW +H Y + V + +TI P+TDG+D DSS +V +E + IS DD + +
Sbjct: 190 RSPFWTVHICYSAYVHVDGITIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVNDDALCL 249
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN-LYNVGVGI 196
K+G D G+ P I IR T + +GSETSGG NV +I+ L +V G+
Sbjct: 250 KAGRDSDGLRVNKPDVDIVIRNCTVRYGAAAFTIGSETSGGFRNVDVYNIHALEHVPSGV 309
Query: 197 HVKTNIGRGGFIRNITVSDVYME 219
K+ RGG+ NI + D ++
Sbjct: 310 LFKSAHTRGGWADNIRIHDFQLD 332
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 15/245 (6%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G IDG+G W + +PF RP L+ F + IS + N W +H +Y +
Sbjct: 810 EGVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTN 863
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
I + I A P++DGID DSS+++ I + I DD +++KSG DE G G PS
Sbjct: 864 GFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPS 923
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNI 211
I I + G+A+GSE SGG+ NV + N + K+ RGG + NI
Sbjct: 924 ENILIENCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENI 983
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSGLIQGL 269
T D+ ++ AR I + P +P P+ + I K++ G + Q +G + G
Sbjct: 984 TFEDITIKGARSIFDINMEWRMVP--PLSPAHYPLTCLRNIHFKNING-EAQSAGTMYGF 1040
Query: 270 KNSPF 274
K +PF
Sbjct: 1041 KETPF 1045
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 145/320 (45%), Gaps = 45/320 (14%)
Query: 22 FLISKFEKISFIGENGTIDGQGAI-WWNM--------------WRQRT---LP----FTR 59
+ S + I+ G GTIDGQG WW+ W ++ +P R
Sbjct: 117 IIASHVQDIAITGP-GTIDGQGQKSWWSKASDAREHLKHGDVSWFEKNWKGIPPANGMPR 175
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P LIEF + + IS + NSP WN+ N+ + +I P DSPNTDGID SS
Sbjct: 176 PWLIEFDHVQGGNISQLHIINSPMWNLVLRNSENIDVSRSSIFNPPDSPNTDGIDVVSSK 235
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
N+ + +STGDD +A+KSG G A PSS I I + G++VGSET+ G+
Sbjct: 236 NISLRHLKLSTGDDDIAIKSGLASTGKAP--PSSNINIDDIDIYRGH-GLSVGSETANGI 292
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 239
V +++ G+ +K+ RG I I+ ++ M + + I G + +
Sbjct: 293 GRVTMQNVRFNGTDNGLRIKSGRDRGNQIGPISADNITMNHVNVPLVITDSYGG--NGGY 350
Query: 240 NPNAL------------PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
+ +L P ++ +TI+ + T +G+I GL +P I L +I++
Sbjct: 351 SSKSLTSIPTSAISSLTPFIHDVTIQHLTATNSGMAGIISGLPEAPLQNITLKDIHIDAT 410
Query: 288 AGPTSPPLKCSDVSGSAYQV 307
G L+ VSG V
Sbjct: 411 HG-----LQSRYVSGEIKNV 425
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 15/245 (6%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G IDG+G W + +PF RP L+ F + IS + N W +H +Y +
Sbjct: 810 EGVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTN 863
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
I + I A P++DGID DSS+++ I + I DD +++KSG DE G G PS
Sbjct: 864 GFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPS 923
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNI 211
I I + G+A+GSE SGG+ NV + N + K+ RGG + NI
Sbjct: 924 ENILIENCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENI 983
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSGLIQGL 269
T D+ ++ AR I + P +P P+ + I K++ G + Q +G + G
Sbjct: 984 TFEDITIKGARSIFDINMEWRMVP--PLSPAHYPLTSLRNIHFKNING-EAQSAGTMYGF 1040
Query: 270 KNSPF 274
K +PF
Sbjct: 1041 KEAPF 1045
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 37 GTIDGQGAIWW--NMWR-------QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIH 87
GT+ +G +W+ N+ T RP+L+ F + ++++ V NSP ++I
Sbjct: 180 GTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVKGVTLLNSPKFHII 239
Query: 88 PVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 147
P C+NVVI +T+ P ++ N D ID S V I ++ I GDD + +K+G G+
Sbjct: 240 PTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIINNVIDAGDDGICMKAGAGAKGVE 299
Query: 148 YGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
YG P + + I T + G +GSE SGG++N++ G+ K+ + RGG
Sbjct: 300 YG-PVANVLIENNTVYNAHGGFVIGSEFSGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGK 358
Query: 208 IRNITVSDVYMENAR 222
NI +SD+YM + +
Sbjct: 359 TENIFISDIYMTDIK 373
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 272 FYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 330
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 390
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 391 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 450
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 451 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 30 ISFIGENGTIDGQGAIWWNM-------WRQRTLPFT------RPNLIEFMNSRSIIISN- 75
+ GE G IDG G ++W+ + R L + RP LI+ NS I + N
Sbjct: 140 VRIYGE-GKIDGNGKVFWDRFQSIRADYEARGLRWAADYDAQRPRLIQIYNSSRIELGNG 198
Query: 76 -----VIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGIDPDSSSNVCIEDSYI 128
+ S FW + VY +V + +T+ D P+TDG+D DSS + +E + I
Sbjct: 199 PMAEPLQLARSGFWTVQIVYSHDVKVSGITVRNNIDGKGPSTDGVDIDSSHTILVEHADI 258
Query: 129 STGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHIN 188
DD + +K+G D G+ P+ + IR T + ++G+ GSETSGG+ NV +
Sbjct: 259 DANDDALCLKAGRDADGLRVNRPTENVVIRNSTIRAAYAGVTFGSETSGGIRNVRVHDLR 318
Query: 189 LYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------AGDVGDHPDDKF-- 239
+ V GI K+ RGG +I +SD+ + A GI+I A P+
Sbjct: 319 VIGPVRYGILFKSAATRGGGASDIDISDIDVAQAETGIRINLNWFPAYSYAKIPEGLTAY 378
Query: 240 ------------NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 286
LP V+ I I+ V ++ + ++ + P + I + ++ L+
Sbjct: 379 PAYWATLTAPVPRSKGLPQVHNIRIRRVTAKGLKTAVDLEAYADVPLSNIQIEDVTLEA 437
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 28 EKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWN 85
+ ++ GE GT++G + WW+ ++ + + RP + +I + + +NSP W
Sbjct: 190 KNVNIYGE-GTLNGNASHENWWHNCKEMKIAW-RPRAVFLNGCENISLVGLTVKNSPSWT 247
Query: 86 IHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 145
IHP + +++ + +LAP DS NTDG+DP+S V + + S GDD +AVKSG G
Sbjct: 248 IHPYFSNHLRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMG 307
Query: 146 IAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
Y PS ITIR+ + + + +GSE GV ++ + G+ +KT GRG
Sbjct: 308 KTYRTPSEHITIRQCSMNDGHGSVVIGSEIGAGVRDLTVRDCIFKDTDRGLRIKTRRGRG 367
Query: 206 GFIRNITVSDVYMENAR 222
+ V V EN R
Sbjct: 368 ---EDCVVDRVAFENIR 381
>gi|255560874|ref|XP_002521450.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223539349|gb|EEF40940.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 466
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 30/286 (10%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQRT------------LPFTRPNLIEFMNSRSI 71
+K + I+ G+ G IDGQG++WWN + +P T+P + F S +
Sbjct: 162 FTKLKGITIKGK-GIIDGQGSVWWNDLPAYSPHSEVAGELNAKMPGTKPTALRFYGSTDV 220
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
++ + QNSP ++ C+ V + T +P +SPNTDGI +S +V I S +S G
Sbjct: 221 TVTGITIQNSPQTHLKFDDCTGVQVSEFTAASPENSPNTDGIHLQNSRDVVIYSSDLSCG 280
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG----SETSGGVENVLAEHI 187
DD V++++G S + I V P GI++G T V NV +
Sbjct: 281 DDCVSIQTG-----------CSNVYIHNVN-CGPGHGISIGGLGKDNTKACVSNVTVRDV 328
Query: 188 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVV 247
+ N G+ +KT G G ++ +T S++ + I I D + N ++ V
Sbjct: 329 QMQNTLTGVRIKTWQGGSGSVQGVTFSNIQVSGVETPIMIDQFYCDGSKCR-NESSAVAV 387
Query: 248 NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 293
+GI ++ GT + + NSP TG+ L I L+ V + P
Sbjct: 388 SGINYMNIKGTYTRNPLHLACSDNSPCTGVSLETIELKSVGENSQP 433
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 17/237 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N R+++I + + S WN+ P+YC NV+IR +T+ + + P+ DGID +
Sbjct: 175 FYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TEVPSGDGIDIE 233
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G + G+ G + + IR GI +GSET+
Sbjct: 234 SCKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHGHGGITIGSETA 293
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGG--------FIRNITVSDVY----MENARKG 224
G ++N+ GI KT RGG +R I V + + NA
Sbjct: 294 GMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKAFTWDLLGNAYYM 353
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
++A + D PN ++ IKD +Q G+ PF+ + N
Sbjct: 354 GELAARYPERAVDHLTPN----ISNTVIKDFIVESSKQFFTANGIPEIPFSNTLIEN 406
>gi|226506034|ref|NP_001151886.1| polygalacturonase precursor [Zea mays]
gi|195650599|gb|ACG44767.1| polygalacturonase precursor [Zea mays]
Length = 416
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 137/298 (45%), Gaps = 26/298 (8%)
Query: 37 GTIDGQGAIWW--NMWRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 91
GTIDG G WW R++T P RP + F R + + V QN+ + + C
Sbjct: 132 GTIDGMGQQWWASTCKRKKTQPCYSGPRPKAVHFEECREVSVQGVTLQNAQQFQLTFTRC 191
Query: 92 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 151
S V ++ ++APADSPNTDGI + +S+V I D+ ISTGDD V++
Sbjct: 192 SCVKASFLRVVAPADSPNTDGIHLNDTSHVRITDNLISTGDDCVSMVGN----------- 240
Query: 152 SSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
S + ++ ++ P GI++GS T+ VE+V + L N G+ +K+ G GF
Sbjct: 241 CSDVRVKDIS-CGPGHGISIGSLGKNRTTDMVEDVKVDTCLLTNTTNGVRIKSWQGGTGF 299
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
R++ ++ M+N I I D P N V + + GT +
Sbjct: 300 ARDLRFENIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKVEFAGIRGTSATPQAISI 359
Query: 268 GLKNS-PFTGICLSNIN--LQGVAGPTSPPLKCSDVSG-SAYQVKPWPCSELSSSQQT 321
++ P + L+N+N L+G G + L C SG SA V P C SS + T
Sbjct: 360 ACSDAVPCRDLELANVNLTLEGGGGGRATAL-CYRASGKSAGTVVPPSCLARSSLRVT 416
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 258 FYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 316
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 317 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 376
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 227
G ++N+ GI KT RGG N + M N K +
Sbjct: 377 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 436
Query: 228 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+P K N P V I IKD Q G+ PF + + N
Sbjct: 437 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 489
>gi|2459817|gb|AAC28906.1| polygalacturonase 5 [Solanum lycopersicum]
Length = 387
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 37 GTIDGQGAIWWNMWR-QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 95
G DGQGA W + Q+ P L F NS +I+++ VI QNS ++I C N +
Sbjct: 118 GIFDGQGASLWTCKKSQKNCPIGTTAL-AFYNSNNIVMNGVIVQNSQMFHILVDGCHNAM 176
Query: 96 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG----WDEYGIAYGHP 151
I+ V +LAP +SPNTDGI SSS V I +S I TGDD +++ G W E GIA G
Sbjct: 177 IQGVKVLAPGNSPNTDGIHVQSSSGVSIRNSNIGTGDDCISIGPGNSNLWIE-GIACG-- 233
Query: 152 SSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKT-NIGRGG 206
P GI++GS GV+NV + + G+ VKT G
Sbjct: 234 -------------PGHGISIGSLGWESKEQGVQNVTVKTVTFTGTQNGVRVKTWARPSSG 280
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL- 265
F+R++ + M N + I I + + + + + ++ +T +D+ GT + +
Sbjct: 281 FVRHVLFQHIVMSNVQNPIIIDQNYCPNHESCPHQGSGVKISDVTYQDIHGTSATEVAVK 340
Query: 266 IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 308
+ K +P +GI L N+NL G C + +G A K
Sbjct: 341 LDCSKTNPCSGITLDNVNLSYKNGRAES--SCVNAAGKASGFK 381
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 17/237 (7%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP I +N R+++I + + S WN+ P+YC NV+IR +T+ + + P+ DGID +
Sbjct: 175 FYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TEVPSGDGIDIE 233
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
S N+ IE ++ GDD +K+G + G+ G + + IR GI +GSET+
Sbjct: 234 SCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHGHGGITIGSETA 293
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGG--------FIRNITVSDVY----MENARKG 224
G ++N+ GI KT RGG +R I V + + NA
Sbjct: 294 GMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKAFTWDLLGNAYYM 353
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
++A + D PN ++ IKD +Q G+ PF+ + N
Sbjct: 354 GELAARYPERAVDHLTPN----ISNTVIKDFIVESSKQFFTANGIPEIPFSNTLIEN 406
>gi|19310405|gb|AAL84942.1| At2g41850/T11A7.5 [Arabidopsis thaliana]
Length = 433
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 21/261 (8%)
Query: 34 GENGTIDGQGAIWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVY 90
G+ G +DG G WW + R + P T P + F NS+S+I+ N+ +N+ I
Sbjct: 163 GDTGVVDGNGETWWQNSCKRNKAKPCTXAPTALTFYNSKSLIVKNLKVRNAQQIQISIEK 222
Query: 91 CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH 150
CSNV + V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG
Sbjct: 223 CSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG---------- 272
Query: 151 PSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG 206
S + I +T P GI++GS + V V + L G+ +KT G G
Sbjct: 273 -SQNVQINDIT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSG 330
Query: 207 FIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL- 265
NI ++ M+N + I I D D +A+ V N + +D+ GT ++ +
Sbjct: 331 TASNIIFQNIQMDNVKNPIIIDQDDCDKGKCTTEKSAVQVKN-VVYRDISGTSASENAIT 389
Query: 266 IQGLKNSPFTGICLSNINLQG 286
KN P GI L +N++G
Sbjct: 390 FNCSKNYPCQGIVLDRVNIKG 410
>gi|409441796|ref|ZP_11268657.1| putative modular protein: Endo-polygalacturonase (N-term), Pectin
methylesterase (C-term) [Rhizobium mesoamericanum
STM3625]
gi|408746731|emb|CCM79902.1| putative modular protein: Endo-polygalacturonase (N-term), Pectin
methylesterase (C-term) [Rhizobium mesoamericanum
STM3625]
Length = 780
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 38/271 (14%)
Query: 31 SFIGENGTIDGQG--------AIWWNMWRQRTLP---FTRPNLIEFMNSRSIIISNVIFQ 79
S +G+ G IDGQG WW + R+ P LI+ + + +
Sbjct: 151 SLVGD-GEIDGQGDKLIEGKRETWWQLARRAQAENGSQNAPRLIQVNGGEDVTFYRLALR 209
Query: 80 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 139
N+ +++ I + I PA + NTDGIDP SS++V I +SYISTGDD +A+K
Sbjct: 210 NAANFHLFLNGVRGATIWGIRINTPASARNTDGIDPASSTDVTIAESYISTGDDNIAIKG 269
Query: 140 GWDEYGIAYGHPSSGITIRRVTGSSPFS--GIAVGSETSGGVENVLAEHINLYNVGVGIH 197
G P++ +TI G+ ++ G+++GSET GV +VL + L G+
Sbjct: 270 G-------SAGPTAHVTI---VGNHLYAGHGMSIGSETQSGVSDVLITDMTLDGTTNGLR 319
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA----LPVVNGITIK 253
+K++ RGG +RNI +V + N R + + D ++ A LPV + IT++
Sbjct: 320 IKSDRSRGGLVRNIDFENVCLRNTRAPLVL--------DTTYDATATGMLLPVYSSITLR 371
Query: 254 DVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
++ GT +++G+ G+ L N+N
Sbjct: 372 NIQGTGGPL--VVRGVDALHSVGLLLDNVNF 400
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 28/292 (9%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV 95
+G I+GQG+ WW +RP ++F + ++ +S + +SP +IH C+ V
Sbjct: 120 DGEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVT 173
Query: 96 IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGI 155
I + I AP SPNTDGID +SSNV I+D I+TGDD +A+ SG I SGI
Sbjct: 174 ISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHI------SGI 227
Query: 156 TIRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
P GI++GS G VENV ++ N G +KT G G+ R I
Sbjct: 228 DC------GPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMI 281
Query: 212 TVSDVYMENARKGIKIAG--DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQG 268
T + + ++N I I + GD + K ++ V+ + + GT + G+ +
Sbjct: 282 TFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRC 341
Query: 269 LKNSPFTGICLSNINLQGVAGPTSPPL--KCSDVSGSAYQVKP-WPCSELSS 317
+ P T I L ++ ++ + + +C +V G++ P C ELS+
Sbjct: 342 SERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLELST 393
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 10/216 (4%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAI--WWNMWRQRTLPFTRPNLIEFMN 67
W N F S E ++ IG+ GTIDG WW +++ + + RP +
Sbjct: 172 WEGNEADCFASLITAINVENVNIIGK-GTIDGNSDFDTWWFKAKEKRIAW-RPRTLFLNA 229
Query: 68 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 127
++I++ V +NSP W IHP+ ++ ++I P ++PNTD +DP+S NV I
Sbjct: 230 CKNILVEGVTIKNSPSWTIHPLMSDHLKFINLSIENPFNAPNTDALDPESCKNVLILGDT 289
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHP--SSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 185
S GDD +A+KSG + I+ +P S I IR S + +GSE S G++++ E
Sbjct: 290 FSVGDDCIAIKSG--KIDISKKNPVSSENINIRNCNMRSGHGAVVLGSEMSSGLKSIFIE 347
Query: 186 HINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYME 219
G+ +KT GRG G I NI + ++ M+
Sbjct: 348 KCIFNATDRGLRIKTRRGRGSKGIIDNIHMKNIKMD 383
>gi|85058593|ref|YP_454295.1| hypothetical protein SG0615 [Sodalis glossinidius str. 'morsitans']
gi|84779113|dbj|BAE73890.1| hypothetical protein [Sodalis glossinidius str. 'morsitans']
Length = 199
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%)
Query: 57 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 116
F RP L++F I + ++ QNSPFW H VY ++ ++ + I+ PAD+ NTD ID D
Sbjct: 66 FLRPPLLQFWKCSQIRLEDITLQNSPFWTCHTVYSRDITLKGIKIINPADAINTDAIDLD 125
Query: 117 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 176
SS N+ IE+ GDD V +KSG G+ P+ G+++ + + GIA+GSET+
Sbjct: 126 SSENILIEECLFDVGDDAVTLKSGSGADGLRINMPTRGVSVSQCKILASHGGIAIGSETA 185
Query: 177 GG 178
GG
Sbjct: 186 GG 187
>gi|2335094|gb|AAC02763.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 426
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 124/258 (48%), Gaps = 22/258 (8%)
Query: 34 GENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G+ G +DG G WW Q + + + F NS+S+I+ N+ +N+ I CSN
Sbjct: 163 GDTGVVDGNGETWW----QNSCKRNKAKALTFYNSKSLIVKNLKVRNAQQIQISIEKCSN 218
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V + V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG S
Sbjct: 219 VQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQ 267
Query: 154 GITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
+ I +T P GI++GS + V V + L G+ +KT G G
Sbjct: 268 NVQINDIT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTAS 326
Query: 210 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQG 268
NI ++ M+N + I I D D +A+ V N + +D+ GT ++ +
Sbjct: 327 NIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKN-VVYRDISGTSASENAITFNC 385
Query: 269 LKNSPFTGICLSNINLQG 286
KN P GI L +N++G
Sbjct: 386 SKNYPCQGIVLDRVNIKG 403
>gi|451341085|ref|ZP_21911561.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
gi|449416100|gb|EMD21877.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
Length = 451
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 122/286 (42%), Gaps = 30/286 (10%)
Query: 26 KFEKISFIGENGTIDGQGAIWWNMWR----------------QRTLPFT----RPNLIEF 65
K I+ G GT+D WN + +R +P + R +E
Sbjct: 149 KESDIAVTGR-GTLDAADTASWNKGKDREYLESLVAKGVPPEKRIVPGSGHAMRSTFVEP 207
Query: 66 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 125
+++I V +N FW +HP C NV I V A NTD DP+S +V I +
Sbjct: 208 YACDTVLIQGVTLKNPVFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVN 267
Query: 126 SYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAE 185
S++ DD +A+K+G D G G P I + + I GSE +GG+ +V A
Sbjct: 268 SHLGAHDDNIALKAGRDADGRRVGVPCRNIVVANCVMDGNWGAITCGSEQTGGISDVYAY 327
Query: 186 HINLY-NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA- 243
+ + ++VK+N RGGF N+ + V AR + PD A
Sbjct: 328 KLTVTGETKYALYVKSNTLRGGFTENVNLDRVSGTFARSFAYVL------PDYNGQTGAY 381
Query: 244 LPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVA 288
+P TI D TK Q+ ++GL NS G+ +S+ GVA
Sbjct: 382 VPRFGPFTISDSASTKCGQAAFDVRGLPNSHVRGLRVSDCRFDGVA 427
>gi|218197199|gb|EEC79626.1| hypothetical protein OsI_20838 [Oryza sativa Indica Group]
Length = 426
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 25/302 (8%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWW--NMWRQRTLP---FTRPNLIEFMNSRSIIISNV 76
+ + + +S G GTIDG GA WW + R++T P + P ++F R + + +
Sbjct: 119 LFVFRVDDLSVSG-GGTIDGMGAEWWARSCKRKKTKPCSTVSAPKALQFEECRRVSVQGI 177
Query: 77 IFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVA 136
QN P +++ C++V ++ ++AP SPNTDGI + +++ I D+ ISTGDD V+
Sbjct: 178 TMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTDGIHLNDTTHAQIMDNLISTGDDCVS 237
Query: 137 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNV 192
+ S + ++ ++ P GI++GS T+ +ENV + L N
Sbjct: 238 MVGN-----------CSDVRVKDIS-CGPGHGISIGSLGKNRTTDRIENVRVDTCLLTNT 285
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITI 252
G+ +K+ G G+ N+ + M+N I I D P N V I
Sbjct: 286 TNGVRIKSWQGGMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKIEF 345
Query: 253 KDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPW 310
+ GT + + ++ P + L N+NL V G + C SG A V P
Sbjct: 346 AGIRGTSATEQAIKLACSDAVPCRDLELRNVNLTMVGGGAASAF-CHRASGKAAGAVVPA 404
Query: 311 PC 312
C
Sbjct: 405 SC 406
>gi|357487387|ref|XP_003613981.1| Polygalacturonase [Medicago truncatula]
gi|355515316|gb|AES96939.1| Polygalacturonase [Medicago truncatula]
Length = 400
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 25 SKFEKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFW 84
SK ++ GE GTIDGQGA WW + RP +F+ S+ ISN+ NSP
Sbjct: 120 SKINGLAVYGE-GTIDGQGAPWWKKYHDG--DSNRPTAFQFIGCESLTISNLNHINSPRN 176
Query: 85 NIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY 144
+I C N I + I+AP +SPNTDGID SSSN+ I + I TGDD +A+ SG
Sbjct: 177 HISIDSCKNASISNLQIIAPENSPNTDGIDIASSSNIIINNLSIKTGDDCIAINSG---- 232
Query: 145 GIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKT 200
S+ I I V P GI+VGS GG VE V + G +KT
Sbjct: 233 -------SNFINITGVL-CGPGHGISVGSLGKGGEYATVEEVHVKDCTFTGTTNGARIKT 284
Query: 201 NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV 260
G G+ R IT ++ + + I I + H D + + + V+ +T ++ GT V
Sbjct: 285 WKGGSGYARKITYENIKLVEVKNPIIINQNYNPHIYD--SSSEVVKVSDVTFLNIHGTSV 342
Query: 261 QQS 263
++
Sbjct: 343 NEN 345
>gi|404400995|ref|ZP_10992579.1| endopolygalacturonase [Pseudomonas fuscovaginae UPB0736]
Length = 737
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 126/273 (46%), Gaps = 41/273 (15%)
Query: 31 SFIGENGTIDGQG--AI------WWNMWRQRTLPFTR---PNLIEFMNSRSIIISNVIFQ 79
S I G IDGQG AI WW + RQ + P LIE SR I + +
Sbjct: 138 SAIVGQGEIDGQGDKAIQGTDQSWWQLARQAQRENGKQNNPRLIEIDRSRDITLYGLRLH 197
Query: 80 NSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 139
N+ +++ + I AD+ NTDGIDP SSNV + ++I TGDD VA+K+
Sbjct: 198 NAANFHVVAYQVDGFTAWGLIIDTAADARNTDGIDPMGSSNVTLAHNFIRTGDDNVAIKA 257
Query: 140 GWD----EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
G I H SG G+++GSET+ GV +VL + L G
Sbjct: 258 GSQGPSRHLSILDNHFYSG------------HGMSIGSETNSGVADVLVRGLTLDGTTSG 305
Query: 196 IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 255
I +K++ RGG ++++ D+ + N R+ I I D D NA+PV I ++ V
Sbjct: 306 IRIKSDASRGGIVQDVRYQDICLRNNRQPIDI--DTAYAKD--VTGNAIPVYRDIVLQHV 361
Query: 256 WGT----KVQQSGLIQGLKNSPFTGICLSNINL 284
G ++Q SG SP G+ L +++
Sbjct: 362 HGADGILRIQASGA------SPAIGLTLDDVHF 388
>gi|166951|gb|AAA32914.1| polygalacturonase [Persea americana]
Length = 453
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 142/300 (47%), Gaps = 23/300 (7%)
Query: 26 KFEKIS--FIGENGTIDGQGAIWWN--MWRQRTLPF-TRPNLIEFMNSRSIIISNVIFQN 80
+FE IS + GTI+G G WW+ R+++LP + P + F + +++I+S++ ++
Sbjct: 167 EFEDISNLTLEGGGTINGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKD 226
Query: 81 SPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 140
S ++ C +V+ + + AP SPNTDGI + + + +S I TGDD ++++SG
Sbjct: 227 SQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESG 286
Query: 141 WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGI 196
S + I P GI++GS + V VL + NL++ G+
Sbjct: 287 ------------SKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGL 334
Query: 197 HVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVW 256
+KT G G +NI ++ M N I I D D + V+ + ++
Sbjct: 335 RIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIR 394
Query: 257 GTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 315
GT + + K+SP GI L NINL G G + + CS++ + K +P S L
Sbjct: 395 GTSASEVAVKFDCSKSSPCQGILLENINLVGNGGKET-TMSCSNIVQGTTEGKVYPPSCL 453
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 135/328 (41%), Gaps = 50/328 (15%)
Query: 33 IGENGTIDGQGAIWWNM-WRQRT------------LPFTRPNLIEFMNSRSIIISNVIFQ 79
I G I+GQG +W+ W+ R+ RP + S III +V +
Sbjct: 153 ISGKGIINGQGKPFWDAYWKLRSEYDKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLK 212
Query: 80 NSPFWNIHPVYCSNVVI--RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+ FW +H +Y S V + + P+TDGID DSS + I+++ I DD +
Sbjct: 213 QAGFWTVHLLYSSYVTVDGIIIKNNINGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCI 272
Query: 138 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 197
KSG D G+ P+ + I I GSETSGG+ +++A ++ + VGI
Sbjct: 273 KSGRDWDGLRVNRPTEYVLITDCISRKGDGLITFGSETSGGMRHIIARNLKAHGTKVGIR 332
Query: 198 VKTNIGRGGFIRNITVSDVYMENARKGIKIA------------------GDVGDHPDDKF 239
+K+ RGG + +I + ++ M++ R ++ V +H
Sbjct: 333 LKSARNRGGVVEDILLENIQMDSVRTAFEVTPNWNPSYSYSKLPAGYDINKVPEHWKKMV 392
Query: 240 NP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 294
P +P I IK+V+ Q++ + GL+ +P L N+ +
Sbjct: 393 TPVEPASKGIPTFQNIQIKNVFVKFAQRAINVDGLQENPLQKFSLENVAI---------- 442
Query: 295 LKCSDVSGSAYQVKPWPCSELSSSQQTG 322
+ +G K W + + Q G
Sbjct: 443 --TAKTAGVIRHAKNWQLKNVKVTAQDG 468
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 19/291 (6%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTID--GQGAIWWNMWRQRTLPFTRPNLIEFMN 67
W N + F I++ + GE GT+D Q WW + + + + RP + ++
Sbjct: 172 WEGNPLNSFAGLLNITQVHDVVVTGE-GTLDCDAQNGDWWIDPKVKRIAW-RPRAVAMVD 229
Query: 68 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 127
S +I + + QNS W IHP++ ++ + I P ++PNTDGIDP+S I
Sbjct: 230 SENICLHGITVQNSYSWTIHPIFVKHLDLLSFNINNPYNAPNTDGIDPESCEYTRIIGVN 289
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 187
I GDD +A+K+ G+ IR GI +GSE SGGV++++
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCLLDKGHGGIVIGSEMSGGVKDMVVTQC 349
Query: 188 NLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP---- 241
+ + G+ VKT GRG I + +V M + I PD +P
Sbjct: 350 LMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPDGH-SPYVQC 408
Query: 242 -NALPV------VNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 284
ALPV + +T++D+ T Q +G GL P G+ + N+ +
Sbjct: 409 REALPVDEYTPKLGTLTMEDIVATDAQFAGCYFDGLPEQPIEGVSMKNVTI 459
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 162 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 221
G + F+ + GS + +V+ + L N I +KT +GRGG+++NI M+
Sbjct: 935 GEARFTSLIYGS----NLTDVVITDVTLINTQSAIRIKTAVGRGGYVKNIFARRFTMKTM 990
Query: 222 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 281
+ + G HP F+P ALP ++ I +D+ V S ++G+KN PFTG+C+SN
Sbjct: 991 KYVFWMTGSYKLHPVGGFDPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSN 1050
Query: 282 INLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 324
+ + P C+DVSG +VKP PCS L T C
Sbjct: 1051 VTIALSPDPKKLQWNCTDVSGVTSRVKPEPCSLLPDKGTTMDC 1093
>gi|52353423|gb|AAU43991.1| unknown protein [Oryza sativa Japonica Group]
gi|215700980|dbj|BAG92404.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740740|dbj|BAG97396.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 426
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 130/287 (45%), Gaps = 24/287 (8%)
Query: 37 GTIDGQGAIWW--NMWRQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 91
GTIDG GA WW + R++T P + P ++F R + + + QN P +++ C
Sbjct: 133 GTIDGMGAEWWARSCKRKKTKPCSTVSAPKALQFEECRRVSVQGITMQNGPQFHLMFTRC 192
Query: 92 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 151
++V ++ ++AP SPNTDGI + +++ I D+ ISTGDD V++
Sbjct: 193 TDVKASFLRVVAPESSPNTDGIHLNDTTHAQIMDNLISTGDDCVSMVGN----------- 241
Query: 152 SSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
S + ++ ++ P GI++GS T+ +ENV + L N G+ +K+ G G+
Sbjct: 242 CSDVRVKDIS-CGPGHGISIGSLGKNRTTDRIENVRVDTCLLTNTTNGVRIKSWQGGMGY 300
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
N+ + M+N I I D P N V I + GT + +
Sbjct: 301 AHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKIEFAGIRGTSATEQAIKL 360
Query: 268 GLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPC 312
++ P + L N+NL V G + C SG A V P C
Sbjct: 361 ACSDAVPCRDLELRNVNLTMVGGGAASAF-CHRASGKAAGAVVPASC 406
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 19/291 (6%)
Query: 10 WISNAIFRFLSDFLISKFEKISFIGENGTID--GQGAIWWNMWRQRTLPFTRPNLIEFMN 67
W N + F I++ + GE GT+D Q WW + + + + RP + ++
Sbjct: 172 WEGNPLDSFAGLLNITQVHDVVVTGE-GTLDCDAQNGDWWINQKVKRIAW-RPRAVAAVD 229
Query: 68 SRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSY 127
S ++ + + QNS W IHP++ ++ + I P ++PNTDGIDP+S + I +
Sbjct: 230 SENVCLHGITVQNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGAN 289
Query: 128 ISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHI 187
I GDD +A+K+ G+ IR GI +GSE SGGV++++
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCLLDKGHGGIVIGSEMSGGVKDMVVTQC 349
Query: 188 NLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNP---- 241
+ + G+ VKT GRG I + +V M + I PD +P
Sbjct: 350 LMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKTPFVINMFYFCDPDGH-SPYVQC 408
Query: 242 -NALPV------VNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 284
+A+PV + +T++D+ T Q +G GL P I + N+ +
Sbjct: 409 RDAMPVDEYTPKLGSLTMEDIVATDAQFAGCYFDGLPEQPIERISMKNVTI 459
>gi|194693572|gb|ACF80870.1| unknown [Zea mays]
Length = 416
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 136/298 (45%), Gaps = 26/298 (8%)
Query: 37 GTIDGQGAIWW--NMWRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 91
GTIDG G WW R++T P RP + F R + + V QN+ + + C
Sbjct: 132 GTIDGMGQQWWASTCKRKKTQPCYSGPRPKAVHFEECREVSVQGVTLQNAQQFQLTFTRC 191
Query: 92 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 151
S V ++ ++APADSPNTDGI + +S+V I D+ ISTGDD V++
Sbjct: 192 SCVKASFLRVVAPADSPNTDGIHLNDTSHVRITDNLISTGDDCVSMVGN----------- 240
Query: 152 SSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
S + ++ ++ P GI++GS T+ VE+V + L N G+ +K+ G GF
Sbjct: 241 CSDVRVKDIS-CGPGHGISIGSLGKNRTTDMVEDVKVDTCLLTNTTNGVRIKSWQGGTGF 299
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
R++ ++ M+N I I D P N V + + GT +
Sbjct: 300 ARDLRFENIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKVEFAGIRGTSATPQAISI 359
Query: 268 GLKNS-PFTGICLSNIN--LQGVAGPTSPPLKCSDVSG-SAYQVKPWPCSELSSSQQT 321
++ P + L+N+N L+G G + L C SG S V P C SS + T
Sbjct: 360 ACSDAVPCRDLELANVNLTLEGGGGGRATAL-CYRASGKSVGTVVPPSCLARSSLRVT 416
>gi|424896488|ref|ZP_18320062.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393180715|gb|EJC80754.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 503
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTR---PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
T+ WW + R+ + P LIE +++ I V +NSP +++ +
Sbjct: 168 ATMADHDETWWQLARRAQTKGGKQNNPRLIEVDHAKEISFYKVKLRNSPNFHVVLNHVEG 227
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V I PADS NTDGIDP +S ++ I S+I TGDD +A+K+G P+S
Sbjct: 228 ATFWGVQIDTPADSRNTDGIDPGASQDITIAHSFIRTGDDNIALKAG--------NGPTS 279
Query: 154 GITIRRVTGSSPF--SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
++I + G+++GSET GV ++L + L G+ +K++I RGG + N+
Sbjct: 280 HVSI---VDDHLYWGHGLSIGSETVAGVSDILVRDVTLDGATSGLRIKSDISRGGTVSNV 336
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 257
+V + RK I D H D+K ++P+ I + DV G
Sbjct: 337 RYENVCLRGNRKPI----DFDTHYDEKARGGSIPIYRDIVLHDVVG 378
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 40/285 (14%)
Query: 28 EKISFIGENGTIDGQGAIWWN-----------------MWRQRTLPFTRPN-LIEFMNSR 69
E I+ G +GTIDG G+ +W+ W RP+ +IE R
Sbjct: 125 EDIAITG-HGTIDGGGSAFWHRKGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIELARCR 183
Query: 70 SIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIS 129
++ I V N+P W + PV C V+IR + + P +PNTDG+D + NV + D I+
Sbjct: 184 NVRIEGVTLTNAPGWTLRPVACETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIA 243
Query: 130 TGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINL 189
TGDD + +KS + YG P+ IT+ S+ +G VG+ T G VEN++ + +
Sbjct: 244 TGDDAICIKS-ENPYGELL--PTKNITVTNCVLSTCCNGFKVGTSTHGRVENIVFSNSVI 300
Query: 190 YNVGV---------GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFN 240
YN GI ++ + GG + + +S++ MENAR + + +G +
Sbjct: 301 YNESTTPLNERATSGIALE--VVDGGSMSGVLISNIQMENARTPLFVR--LG-----RRK 351
Query: 241 PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
P + GI + + T + I GL + P + ++N + +
Sbjct: 352 PAQGSFLRGIRFEQIHATGALLTSSITGLPDMPVEDVVIANSSFR 396
>gi|388511385|gb|AFK43754.1| unknown [Medicago truncatula]
Length = 400
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 130/289 (44%), Gaps = 30/289 (10%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G IDG+GA WW+ P + F ++I+ + NSP +I C I
Sbjct: 133 GIIDGKGAQWWDCHSNIKCEKENPTALHFHACENLILRELTHINSPRNHISLNACHGSHI 192
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
+ I+AP +SPNTDGID SSN+ IE+S I TGDD +A+ H S+ I
Sbjct: 193 SKLHIIAPNESPNTDGIDIAESSNIIIENSKIETGDDCIAIN-----------HGSNSIY 241
Query: 157 IRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I + P GI+VGS G VEN + G +KT IG G+ R +T
Sbjct: 242 INGIF-CGPGHGISVGSLGRNGVHESVENTYVRNCTFNRTTNGARIKTWIGGNGYARKVT 300
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNP--NALPV-VNGITIKDVWGTKVQQSGL-IQG 268
D+ + A + I D ++NP +A V V+ +T +++ GT + + + +
Sbjct: 301 FEDIILIEADNPVII--------DQEYNPYDSAYAVKVSDVTFRNIRGTSIAKHAIQLHC 352
Query: 269 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PCSELS 316
++ T I L IN+ G C +V+G P+ PC L
Sbjct: 353 DEDITCTNIILEGINITSSIGEEVHA-SCKNVNGVCTSCIPYVPCLSLE 400
>gi|356544252|ref|XP_003540568.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 402
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G IDG G++WWN + ++ +RP + N ++ ++ NS +I ++ I
Sbjct: 132 GQIDGSGSVWWNSCKVKSC--SRPTALSIHNCNNLQLTGTRHLNSARNHISINNSNHTHI 189
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
VTI AP DSPNTDGID SS + I+ S I+TGDD +A+ SG I +GIT
Sbjct: 190 FNVTITAPQDSPNTDGIDVSQSSYILIQRSTIATGDDCIAMNSGTSYVNI------TGIT 243
Query: 157 IRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
P GI+VGS G VE+V + N G+ +KT G G+ RNI
Sbjct: 244 C------GPGHGISVGSLGKKGTCQTVEHVHVSNCNFKGADNGMRIKTWPGGCGYARNIK 297
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL--- 269
+ + N + I I D + ++ + ++G+T + V GT ++ +I
Sbjct: 298 FEHIVLTNTKNPIIIDQDYENVQNEDKKQTSEVQISGVTYRYVNGTCNSETAIILNCGAG 357
Query: 270 --------------KNSPFTGICLSNINLQGVAGPTSPPLKC 297
S + + S N GVA TSPP+ C
Sbjct: 358 AGCTDIFMDLVNITSTSSGSNVLASCNNAHGVAASTSPPVSC 399
>gi|9967518|emb|CAC05657.1| endopolygalacturonase [Brassica napus]
gi|9967520|emb|CAC05658.1| endopolygalacturonase [Brassica napus]
Length = 434
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 125/262 (47%), Gaps = 22/262 (8%)
Query: 34 GENGTIDGQGA-IWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPV 89
G GT++G GA WW + R T+ P + F NS+++ ++N+ +++ I
Sbjct: 163 GATGTVNGNGAETWWENSCKRNEAKKCTKAPTALTFYNSKNLRVNNLRVKDAQQIQISIE 222
Query: 90 YCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 149
CSNV + V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG
Sbjct: 223 KCSNVQVSNVEVTAPADSPNTDGIHITNTQNIQVSNSIIGTGDDCISIESG--------- 273
Query: 150 HPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 205
S + I +T P GI++GS + V V + L G+ +KTN G
Sbjct: 274 --SQNVQINDLT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTNQGGS 330
Query: 206 GFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 265
G NI ++ MEN I I D D +A+ + N + +++ GT +
Sbjct: 331 GTASNIIFQNIQMENVENPIIIDQDYCDKSKCTEQKSAVQIKN-VVYRNISGTSASDIAI 389
Query: 266 -IQGLKNSPFTGICLSNINLQG 286
KN P GI L +N++G
Sbjct: 390 TFNCSKNYPCQGIVLDKVNIKG 411
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP+LI F ++I++ + + SPFW IH C++ V+R++ + A N DGID + S
Sbjct: 190 RPHLIHFNRCKNILLEDFHIRQSPFWTIHLYLCNSGVVRHLDV--QAHGHNNDGIDLEMS 247
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 178
N IE+ GDD V +K+G ++ PS I +R + + + +GSE SGG
Sbjct: 248 RNFLIENCKFDQGDDAVVIKAGRNQDAWRLNTPSENIVVRDCDILNGHTLLGIGSEISGG 307
Query: 179 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 237
V N+ NV +KTN RGGFI NI + D+ + + ++ DV D
Sbjct: 308 VRNIYMTRCKAPQNVHRLFFLKTNHRRGGFIENIYLEDIEAGDMLRTFEVDTDVLYQWKD 367
Query: 238 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 287
+ ++GI +K++ ++G P + + N+ + V
Sbjct: 368 LVPTYETRITRIDGIHVKNIHCQSADAIYELKGDARLPIRNVFVENVKVDTV 419
>gi|194708392|gb|ACF88280.1| unknown [Zea mays]
gi|223950129|gb|ACN29148.1| unknown [Zea mays]
gi|413946313|gb|AFW78962.1| polygalacturonase [Zea mays]
Length = 407
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 22/258 (8%)
Query: 37 GTIDGQGAIWW--NMWRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 91
GTIDG G WW R++T P RP + F R + + V QN+ + + C
Sbjct: 128 GTIDGMGQQWWASTCKRKKTQPCYSGPRPKAVHFEECREVSVQGVTLQNAQQFQLTFTRC 187
Query: 92 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 151
S V ++ ++APADSPNTDGI + +S+V I D+ ISTGDD V++
Sbjct: 188 SCVKASFLRVVAPADSPNTDGIHLNDTSHVRITDNLISTGDDCVSMVGN----------- 236
Query: 152 SSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
S + ++ ++ P GI++GS T+ VE+V + L N G+ +K+ G GF
Sbjct: 237 CSDVRVKDIS-CGPGHGISIGSLGKNRTTDMVEDVKVDTCLLTNTTNGVRIKSWQGGTGF 295
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
R++ ++ M N I I D P N V + + GT +
Sbjct: 296 ARDLRFENIVMRNVSNPIIIDQYYCDQPTPCANQTQAVEVRRVEFAGIRGTSATPQAISI 355
Query: 268 GLKNS-PFTGICLSNINL 284
++ P + L+N+NL
Sbjct: 356 ACSDAVPCRDLELANVNL 373
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 20/233 (8%)
Query: 28 EKISFIGENGTIDGQGAIWWNMWRQRTLPFTRPNL-------------IEFMNSRSIIIS 74
E + GE G ID +G ++W+ + + + + L I NS+ I +
Sbjct: 151 ENAALTGE-GFIDCRGKVFWDKYWEMRKEYEKKKLRWIVDYDCKRVRGILVSNSKHITLK 209
Query: 75 NVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ + FW +Y + + VTI P+TDGID DSS+N+ +E+ + D
Sbjct: 210 DFTLVRTGFWACQILYSDHCSVDGVTINNNVGGHGPSTDGIDIDSSTNILVENCEVDCND 269
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D + +K+G D G+ P+ + IR T + GSETSG + NVLA + Y
Sbjct: 270 DNICIKAGRDADGLRVNRPTENVVIRNCTARKGAGLVTCGSETSGSIRNVLAYDLKAYGT 329
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALP 245
G + +K+++ RGG + NI ++ V ++ +K VG + + K++ +ALP
Sbjct: 330 GAALRLKSSMNRGGTVENIYMTRVKADS----VKYVLAVGLNWNPKYSYSALP 378
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 32 FIGENGTIDGQGAIWWNM-WRQRTLPF-------------TRPNLIEFMNSRSIIISNVI 77
I GTIDGQG ++W+M W R + RP + NS+++I+ ++
Sbjct: 153 LISGEGTIDGQGKVFWDMYWDMRKNDYEPKGLRWIVDYDAKRPRTVLIQNSKNVIVRDLT 212
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
Q + FW + +Y +V +TI P+TDGID DSSS + +++ I DD
Sbjct: 213 LQRAGFWTVQILYSKHVTTDGLTIRNNIGGHGPSTDGIDIDSSSYILVQNCDIDCNDDNF 272
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
+K+G D G+ P+ + I+ + VGSETSGG+ ++ A +I G
Sbjct: 273 CLKAGRDWDGLRVNRPTEYVVIKDCKTGKGAGLLTVGSETSGGIRHIYANNIQGKGTDAG 332
Query: 196 IHVKTNIGRGGFIRNITVSDVYME 219
+ +K+ RGG I +I ++ M+
Sbjct: 333 LKLKSATTRGGVIEDIIFDNMKMD 356
>gi|413946311|gb|AFW78960.1| polygalacturonase [Zea mays]
Length = 490
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 22/258 (8%)
Query: 37 GTIDGQGAIWW--NMWRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYC 91
GTIDG G WW R++T P RP + F R + + V QN+ + + C
Sbjct: 211 GTIDGMGQQWWASTCKRKKTQPCYSGPRPKAVHFEECREVSVQGVTLQNAQQFQLTFTRC 270
Query: 92 SNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP 151
S V ++ ++APADSPNTDGI + +S+V I D+ ISTGDD V++
Sbjct: 271 SCVKASFLRVVAPADSPNTDGIHLNDTSHVRITDNLISTGDDCVSMVGN----------- 319
Query: 152 SSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGF 207
S + ++ ++ P GI++GS T+ VE+V + L N G+ +K+ G GF
Sbjct: 320 CSDVRVKDIS-CGPGHGISIGSLGKNRTTDMVEDVKVDTCLLTNTTNGVRIKSWQGGTGF 378
Query: 208 IRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ 267
R++ ++ M N I I D P N V + + GT +
Sbjct: 379 ARDLRFENIVMRNVSNPIIIDQYYCDQPTPCANQTQAVEVRRVEFAGIRGTSATPQAISI 438
Query: 268 GLKNS-PFTGICLSNINL 284
++ P + L+N+NL
Sbjct: 439 ACSDAVPCRDLELANVNL 456
>gi|383816572|ref|ZP_09971967.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
gi|383294566|gb|EIC82905.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
Length = 415
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 46/254 (18%)
Query: 30 ISFIGENG-------TIDGQGAI--------WWNMWRQRTLPFTR---PNLIEFMNSRSI 71
I+F G NG IDG+G WW + R+ R P LIE ++R++
Sbjct: 131 ITFEGNNGGGITGDGEIDGRGGQLMKGRNESWWQLARRAQKEHRRQNTPRLIEIEHARNL 190
Query: 72 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 131
+ + NSP +++ + + + VTI APA + NTDGIDP ++++V I S ISTG
Sbjct: 191 VFYRIRLVNSPNFHMAMNHVEGITVWGVTINAPATARNTDGIDPGAATDVTIAHSIISTG 250
Query: 132 DDLVAVKSGWDEYGIAYGHPSSGITIRRVT----GSSPFSGIAVGSETSGGVENVLAEHI 187
DD VA+K+G SG R ++ G+++GSETS GV +VL +
Sbjct: 251 DDDVAIKAG------------SGCGSRFISIIDNHFYAGHGMSIGSETSAGVSDVLVNGL 298
Query: 188 NLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA---- 243
L G+ +K+++ RGG + N+ ++ + + R I D +++P+A
Sbjct: 299 TLDGTTSGLRIKSDVSRGGLVNNLDFENITLHHNRWPINF--------DTRYDPDAKGNL 350
Query: 244 LPVVNGITIKDVWG 257
+P IT+ ++ G
Sbjct: 351 IPQFQNITLVNIRG 364
>gi|424887243|ref|ZP_18310848.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175015|gb|EJC75058.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 472
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 26/255 (10%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTR---PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
T+ WW + R + P LIE +++ I V +NSP +++ +
Sbjct: 168 ATMADHDETWWQLARSAQTKGGKQNNPRLIEVDHAKEISFYKVKLRNSPNFHVVLNHVEG 227
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V I PADS NTDGIDP +S ++ I S+I TGDD +A+K+G P+S
Sbjct: 228 ATFWGVQIDTPADSRNTDGIDPGASQDITIAHSFIRTGDDNIALKAG--------NGPTS 279
Query: 154 GITIRRVTGSSPF--SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 211
++I + G+++GSET GV ++L + L G+ +K++I RGG + N+
Sbjct: 280 HVSI---VDDHLYWGHGLSIGSETVAGVSDILVRDVTLDGTTSGLRIKSDISRGGTVSNV 336
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG--LIQGL 269
+V + RK I D H D+K ++P+ + I + DV G +SG +I+G
Sbjct: 337 RYENVCLRGNRKPI----DFDTHYDEKARGGSIPIYHDIVLHDVVG----ESGTLVIRGQ 388
Query: 270 KNSPFTGICLSNINL 284
+ G+ +
Sbjct: 389 DEAHALGVQFDGVRF 403
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
Length = 1095
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 11/243 (4%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G IDG+G W + +PF RP L+ F + IS + N W +H +Y +
Sbjct: 810 EGVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTN 863
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
I + I A P++DGID DSS+++ I + I DD +++KSG DE G G PS
Sbjct: 864 GFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPS 923
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNI 211
I I + G+A+GSE SG + NV + N + K+ RGG + NI
Sbjct: 924 ENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENI 983
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
T D+ ++ AR I + P L + I K++ G + Q +G + G K
Sbjct: 984 TFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKE 1042
Query: 272 SPF 274
+PF
Sbjct: 1043 APF 1045
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 11/243 (4%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G IDG+G W + +PF RP L+ F + IS + N W +H +Y +
Sbjct: 810 EGVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTN 863
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
I + I A P++DGID DSS+++ I + I DD +++KSG DE G G PS
Sbjct: 864 GFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPS 923
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNI 211
I I + G+A+GSE SG + NV + N + K+ RGG + NI
Sbjct: 924 ENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENI 983
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
T D+ ++ AR I + P L + I K++ G + Q +G + G K
Sbjct: 984 TFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKE 1042
Query: 272 SPF 274
+PF
Sbjct: 1043 TPF 1045
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 11/243 (4%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G IDG+G W + +PF RP L+ F + IS + N W +H +Y +
Sbjct: 810 EGVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTN 863
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
I + I A P++DGID DSS+++ I + I DD +++KSG DE G G PS
Sbjct: 864 GFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPS 923
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNI 211
I I + G+A+GSE SG + NV + N + K+ RGG + NI
Sbjct: 924 ENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENI 983
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
T D+ ++ AR I + P L + I K++ G + Q +G + G K
Sbjct: 984 TFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKE 1042
Query: 272 SPF 274
+PF
Sbjct: 1043 APF 1045
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
Length = 1095
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 11/243 (4%)
Query: 36 NGTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCS 92
G IDG+G W + +PF RP L+ F + IS + N W +H +Y +
Sbjct: 810 EGVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTN 863
Query: 93 NVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 152
I + I A P++DGID DSS+++ I + I DD +++KSG DE G G PS
Sbjct: 864 GFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPS 923
Query: 153 SGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNI 211
I I + G+A+GSE SG + NV + N + K+ RGG + NI
Sbjct: 924 ENILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENI 983
Query: 212 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 271
T D+ ++ AR I + P L + I K++ G + Q +G + G K
Sbjct: 984 TFEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKE 1042
Query: 272 SPF 274
+PF
Sbjct: 1043 APF 1045
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 59 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 118
RP LI+ + + + +NSPFW H VY VV+R +T+ + PN DG+D +SS
Sbjct: 210 RPPLIQVFGGKRVRLEGFTARNSPFWVNHLVYADEVVVRGITV--DSHFPNNDGVDVESS 267
Query: 119 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR--RVTGSSPFSGIAVGSETS 176
+ V IE+S TGDD V +KSG D G G PS+ + +R + G GIA+GSE S
Sbjct: 268 TRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVRGNDMGGE---DGIALGSEMS 324
Query: 177 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 220
GGV +V L I K N+ RGG + + V ++ +E+
Sbjct: 325 GGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVRVRNMTVED 368
>gi|47606004|sp|Q7M1E7.1|PGLR2_CHAOB RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Major
pollen allergen Cha o 2; AltName: Full=Pectinase;
AltName: Allergen=Cha o 2; Flags: Precursor
Length = 514
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 138/308 (44%), Gaps = 38/308 (12%)
Query: 9 IWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWW----NMWRQRTL--PFTRPNL 62
IW+ F L+DF + +G G IDGQG WW + RT+ RP
Sbjct: 138 IWLQ---FAQLTDF--------NLMG-TGVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTA 185
Query: 63 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 122
I+ S+S+ + + NSP +++ C V I+ + I AP DSPNTDGID +S
Sbjct: 186 IKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFH 245
Query: 123 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGG 178
IE I TGDD +A+ +G SS ITI+ + P GI++GS +
Sbjct: 246 IEKCVIGTGDDCIAIGTG-----------SSNITIKDLI-CGPGHGISIGSLGRDNSRAE 293
Query: 179 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 238
V +V + G+ +KT G G IT +V M N+ I I
Sbjct: 294 VSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASAC 353
Query: 239 FNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPPLKC 297
N + + G+T K++ GT + + +S P TGI LSN++L+ +G P C
Sbjct: 354 QNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVSLKLTSG---KPASC 410
Query: 298 SDVSGSAY 305
D + +
Sbjct: 411 VDKNARGF 418
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 126/277 (45%), Gaps = 24/277 (8%)
Query: 28 EKISFIGENGTIDGQGAIWWN-MWRQRT------------LPFTRPNLIEFMNSRSIIIS 74
EK S GE GT+D +G I+W+ W R R I NS + +S
Sbjct: 180 EKASVSGE-GTLDCRGKIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVENSSDVTLS 238
Query: 75 NVIFQNSPFWNIHPVYCSNVVIRYVTILAP--ADSPNTDGIDPDSSSNVCIEDSYISTGD 132
N + FW +Y + + + I P+TDGID DSS+N+ IE+ I D
Sbjct: 239 NFTLMRTGFWGCQILYSDHCTVDGLIINNNIGGRGPSTDGIDIDSSTNILIENCEIDCND 298
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D + +K+G D G+ P+ I IR T I GSETSGG+ NVLA + +
Sbjct: 299 DNICLKAGRDADGLRVNRPTENIVIRNCTVHKGGGLITCGSETSGGIRNVLAHDLKAFGT 358
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPV-VNGIT 251
+ +K+ + RGG I NI ++ V +N R+ D +P K++ + LP G
Sbjct: 359 SNVLQLKSAMTRGGVIENIYITRVEAKNVRR--IFGADPNWNP--KYSYSTLPENYKGKE 414
Query: 252 IKDVWGTKVQQSGLIQGLKNSP-FTGICLSNINLQGV 287
+ + W KV + +I K P F I LS + V
Sbjct: 415 LPEHW--KVMLTPVIPSEKGFPHFRNIYLSQVKATNV 449
>gi|114841683|dbj|BAF32143.1| pollen allergen [Chamaecyparis obtusa]
Length = 419
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 142/311 (45%), Gaps = 44/311 (14%)
Query: 9 IWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWW----NMWRQRTL--PFTRPNL 62
IW+ F L+DF + +G G IDGQG WW + RT+ RP
Sbjct: 108 IWLQ---FAQLTDF--------NLMG-TGVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTA 155
Query: 63 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 122
I+ S+S+ + + NSP +++ C V I+ + I AP DSPNTDGID +S
Sbjct: 156 IKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFH 215
Query: 123 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENV 182
IE I TGDD +A+ +G SS ITI+ + P GI++GS G +N
Sbjct: 216 IEKCVIGTGDDCIAIGTG-----------SSNITIKDLI-CGPGHGISIGSL---GRDNS 260
Query: 183 LAE----HIN---LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 235
AE H+N + G+ +KT G G IT +V M N+ I I
Sbjct: 261 RAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSA 320
Query: 236 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPP 294
N + + G+T K++ GT + + +S P TGI LSN++L+ +G P
Sbjct: 321 SACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVSLKLTSG---KP 377
Query: 295 LKCSDVSGSAY 305
C D + +
Sbjct: 378 ASCVDKNARGF 388
>gi|27902550|gb|AAO24262.1| putative style polygalacturonase [Turnera subulata]
Length = 473
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 138/311 (44%), Gaps = 44/311 (14%)
Query: 3 FGLMILIWISNAIFRFLSDFLISKFEKISFIGENGTIDGQGAIWWN-------MWRQRT- 54
+G +L WI F+ L+ F I GTIDG+G++WWN W
Sbjct: 159 WGSGLLQWIE---FKELNGFTIQG---------KGTIDGRGSVWWNDLPSYGSEWESEVG 206
Query: 55 ------LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 108
+P T+P + F S + ++ + QNSP ++ C+ V + T +P +SP
Sbjct: 207 NQLDGKMPSTKPTALRFYGSTGVTVTGITIQNSPQTHLKFDSCTGVQVSDFTTSSPGNSP 266
Query: 109 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 168
NTDGI +S NV I S ++ GDD +++++G S + I V P G
Sbjct: 267 NTDGIHLQNSQNVLIYSSDLACGDDCISIQTG-----------CSNVFIHNVN-CGPGHG 314
Query: 169 IAVG----SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 224
I++G T V NV ++++N G+ +KT G G ++ IT S+V +
Sbjct: 315 ISIGGLGKDNTKACVSNVTVRDVSMHNTLTGVRIKTWQGGSGSVQGITFSNVQVSGVGTP 374
Query: 225 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 284
I I D K + +A+ + GI + GT ++ + P G+ LS I L
Sbjct: 375 IMIDQFYCDGSKCKNDSSAV-ALTGINYLGIKGTYTEKPIHFACSDSMPCVGVSLSTIEL 433
Query: 285 QGVAGPTSPPL 295
+ SPPL
Sbjct: 434 T-ASEEDSPPL 443
>gi|314949481|ref|ZP_07852816.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430834090|ref|ZP_19452099.1| glycosyl hydrolase [Enterococcus faecium E0679]
gi|313644095|gb|EFS08675.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430485613|gb|ELA62513.1| glycosyl hydrolase [Enterococcus faecium E0679]
Length = 269
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Query: 76 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 135
+IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GDD +
Sbjct: 1 MIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGDDCI 59
Query: 136 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
A+KSG D G SS I + R S + G+ +GSE S GV +V I+ + G
Sbjct: 60 AIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQSDCG 118
Query: 196 IHVKTNIGRGGFIRNITVSDVYM 218
I +K++ RGG I NI V ++ M
Sbjct: 119 IRMKSSKERGGVIENIRVENLNM 141
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 28 EKISFIGENGTIDGQGAIWWN-MWRQRT------------LPFTRPNLIEFMNSRSIIIS 74
+K + G + QG ++W+ W R RP + S + +
Sbjct: 141 QKNVMVSGEGVVHAQGKVFWDSYWAMRKDYEAKGLRWIVDYDCKRPRTLLVSESSDVTVK 200
Query: 75 NVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIEDSYISTGD 132
+ F+ + FW I +Y S + V I P+TDG+D DSSS + +E+ I D
Sbjct: 201 GLTFRQAGFWTIQILYSSYCTVDGVIIQNNVGGHGPSTDGVDIDSSSYILVENCDIDCND 260
Query: 133 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNV 192
D +KSG D G+ P+ I IR + + GSETSGG+ +VLAE +
Sbjct: 261 DNFCLKSGRDADGLRVNRPTEYIVIRNCISRAGGGLLTCGSETSGGIRHVLAEGLKAKGT 320
Query: 193 GVGIHVKTNIGRGGFIRNITVSDVYMENAR 222
VGI +K+ + RGG +I + DV M+N R
Sbjct: 321 TVGIRLKSAMNRGGTTEHIYIRDVEMDNVR 350
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
G IDG+G W + +PF RP L+ F + IS + N W +H +Y +
Sbjct: 194 GVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNG 247
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
I + I A P++DGID DSS+++ I + I DD +++KSG DE G G PS
Sbjct: 248 FTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSE 307
Query: 154 GITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNIT 212
I I + G+A+GSE SG + NV + N + K+ RGG + NIT
Sbjct: 308 NILIENCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENIT 367
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
D+ ++ AR I + P L + I K++ G + Q +G + G K +
Sbjct: 368 FEDIIIKGARSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKEA 426
Query: 273 PF 274
PF
Sbjct: 427 PF 428
>gi|224143124|ref|XP_002324855.1| predicted protein [Populus trichocarpa]
gi|222866289|gb|EEF03420.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 127/285 (44%), Gaps = 21/285 (7%)
Query: 37 GTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI 96
G IDGQG++WW R + N + F + +S + +SP +I C+ V+I
Sbjct: 129 GLIDGQGSVWW----MRAMQANSLNALNFEKCDDLQLSGLTHVDSPKGHIGITDCNGVLI 184
Query: 97 RYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGIT 156
+ I AP +SPNTDGID S+NV I+DS I+TGDD VA+ G S I
Sbjct: 185 SNLNIAAPENSPNTDGIDMARSTNVHIQDSMIATGDDCVAINGG-----------CSYIN 233
Query: 157 IRRVTGSSPFSGIAVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT 212
I + P GI+VGS G VE V + + +KT G G+ R I+
Sbjct: 234 ITNIA-CGPGHGISVGSLGKDGQYDTVEEVHVRNCSFTGTQNAARIKTWQGGSGYARKIS 292
Query: 213 VSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 272
+ + ++ I I D ++ N + V+ +T GT V + + +
Sbjct: 293 YEQITLVASKNPIIIDQYYCDGVNNCRNSSTALQVSDVTYSGFQGTSVDEEAIRLDCSDR 352
Query: 273 PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPW-PCSELS 316
I + NIN+ + + C SG+++ P+ PC +S
Sbjct: 353 GCINIVMDNINITSLDPGKTTYAYCEHTSGTSWFTAPYVPCLSVS 397
>gi|129937|sp|P27644.1|PGLR_RHIRD RecName: Full=Polygalacturonase; AltName: Full=PGL; AltName:
Full=Pectinase
gi|142256|gb|AAA22102.1| PGL ORF [Agrobacterium tumefaciens]
Length = 312
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 78 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 137
+N+ W IHP C ++ TI+AP DSPNTDG +P+S NV I S GDD +AV
Sbjct: 40 IRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAV 99
Query: 138 KSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 195
K+G H + GIT+R G+ +GSE SGGV +V E ++ G
Sbjct: 100 KAGKRGPDGEDDHLAETRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRG 159
Query: 196 IHVKTNIGR-GGFIRNITVSDVYMENARKGIKIAG----DVGDHPD--DKFNP----NAL 244
+ +KT GG + NIT+ V ++ + + D H D NP +
Sbjct: 160 LRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGT 219
Query: 245 PVVNGITIKDVWGTKV-QQSGLIQGLKNSP 273
P V+GIT++DV + +G+ GL + P
Sbjct: 220 PFVDGITVEDVEIRNLAHAAGVFLGLPDVP 249
>gi|356565972|ref|XP_003551209.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
Length = 460
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 141/313 (45%), Gaps = 25/313 (7%)
Query: 17 RFLSDFLISKFEKISFIGENGTIDGQGAIWW--NMWRQRTLPFT-RPNLIEFMNSRSIII 73
R DF SK K F G +G IDG G+ WW + + ++ P P S SI +
Sbjct: 147 RVWLDF--SKLNKTVFQG-SGVIDGSGSKWWAASCKKNKSNPCKGAPTAFTIDTSSSIRV 203
Query: 74 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 133
+ QNS + C +V I V + AP DSPNTDGI S+NV I+DS I TGDD
Sbjct: 204 KGLTIQNSQQMHFTISRCDSVRITSVKVSAPGDSPNTDGIHISESTNVIIQDSKIGTGDD 263
Query: 134 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINL 189
+++ + SS I ++R+ P GI++GS ++G V V+ + L
Sbjct: 264 CISIV-----------NASSNIKMKRIY-CGPGHGISIGSLGKDNSTGIVTKVILDTAVL 311
Query: 190 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNG 249
G+ +KT G G++R + +V +EN I I D P N ++
Sbjct: 312 RETTNGVRIKTWQGGSGYVRGVRFQNVRVENVSNPIIIDQFYCDSPTSCENQTTAVEISE 371
Query: 250 ITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVK 308
+ +++ GT + + +S P + LSN++L+ G S C G Y V
Sbjct: 372 VMYQNISGTTMSAKAIKFDCSDSVPCNKLVLSNVDLEKQDG--SVETYCHSAQGFPYGVV 429
Query: 309 PWPCSELSSSQQT 321
LSSS +T
Sbjct: 430 HPSADCLSSSDKT 442
>gi|445494991|ref|ZP_21462035.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791152|gb|ELX12699.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 868
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 39/253 (15%)
Query: 22 FLISKFEKISFIGENGTIDGQGA--------IWWNMWRQRTLPFTR---PNLIEFMNSRS 70
F+ + + S I G IDGQG WW + R+ R P LIE S+
Sbjct: 124 FITADRTRGSGIFGAGAIDGQGGHVVDGASESWWQLARRAQKEDARQNVPRLIEVTGSQD 183
Query: 71 IIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYIST 130
+ + +NSP +++ + I PA + NTDGIDP SS N+ I S+I T
Sbjct: 184 FTLHKITLRNSPNFHVTLNNVDGFTAWGMRIDTPATARNTDGIDPISSRNITIAYSHIRT 243
Query: 131 GDDLVAVKSG----WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEH 186
GDD VA+K+G + I + H SG G+++GSET+GGV VL +
Sbjct: 244 GDDNVAIKAGSSGPTENISILHNHFYSG------------HGMSIGSETNGGVRRVLVDD 291
Query: 187 INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA--- 243
+N+ G+ +K+++ RGG + ++ +V + + + I I+ ++NP A
Sbjct: 292 LNMDGTTSGLRIKSDVSRGGVVDQVSYRNVCLRDVKTPIDIS--------TRYNPRAEGA 343
Query: 244 -LPVVNGITIKDV 255
+PV I V
Sbjct: 344 LIPVYTNIAFDGV 356
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 108/252 (42%), Gaps = 16/252 (6%)
Query: 60 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 119
P + N ++++I V + S FWNI PVYC V+IR T+ + TDGID +S+
Sbjct: 213 PLFVSPTNCKNVLIEGVTLERSLFWNIVPVYCDGVIIRGATVDSHGHG-RTDGIDIESTR 271
Query: 120 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 179
NV IE + GDD +KSG E GI PS I IR + GI GSET+ +
Sbjct: 272 NVLIEYCSLDCGDDCFTMKSGRGEDGIRVNKPSENIVIRYCLAKRGWGGIVCGSETAAMI 331
Query: 180 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI--------KIAGDV 231
N+ G+ KT RGG N+T + M K GD+
Sbjct: 332 RNLYVHDCVFTGTKSGLRFKTRRSRGGGGENLTFERIRMNLTGAAFWWDMLGEEKHVGDL 391
Query: 232 GDH-PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 290
P P P ITI+D+ + G+ +P N ++ + G
Sbjct: 392 AKRLPARPITP-LTPSFKNITIRDIIVESASYFIDLNGIPETP-----AENNLIENLVGK 445
Query: 291 TSPPLKCSDVSG 302
T+ ++ +DV G
Sbjct: 446 TNKLIRMTDVKG 457
>gi|300728596|ref|ZP_07061954.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774165|gb|EFI70799.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 453
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 14/259 (5%)
Query: 35 ENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNV 94
E DGQ + Q P +NSR++++ V + S FWNI PVYC N+
Sbjct: 182 EERIFDGQKK--HTIDHQEKAEICLPTFFGPVNSRNVLLEGVTLERSVFWNIVPVYCENI 239
Query: 95 VIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSG 154
+IR VT+ + + TDGID DSS N +E + + GDD +KSG G+ P+
Sbjct: 240 IIRDVTVNSFGHA-RTDGIDFDSSRNGLVEYTTLDCGDDCFTLKSGRGMDGVKRNRPTEN 298
Query: 155 ITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 214
I IR + G +GSET+ + NV I + + ++ K+ RGG N+ +
Sbjct: 299 IVIRHCKVVNAAGGFTIGSETAAMIRNVYVYDIEMEHPRFALYFKSRRPRGGGAENVWME 358
Query: 215 DVYMENARKGIKIAGDVGDHPD------DKF---NPNAL-PVVNGITIKDVWGTKVQQSG 264
+++ + K I D+ P+ ++F PNAL P I K++ +
Sbjct: 359 NIHAKQT-KYTAIKWDLLGSPEYVGKLAERFAVKEPNALTPKFRNIHFKNISIDQCPTLI 417
Query: 265 LIQGLKNSPFTGICLSNIN 283
+ GL P + N+
Sbjct: 418 KMVGLPEQPIEQVTYENVK 436
>gi|224130352|ref|XP_002328587.1| predicted protein [Populus trichocarpa]
gi|222838569|gb|EEE76934.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 23/294 (7%)
Query: 22 FLISKFEKISFIGENGTIDGQGAIWW--NMWRQRTLPFT-RPNLIEFMNSRSIIISNVIF 78
SK + F G NG IDG G+ WW + + ++ P P + +S ++ I+ +
Sbjct: 147 LYFSKLNGVLFQG-NGVIDGSGSKWWASSCKKNKSNPCRGAPTALTIDSSSAVKINGLTI 205
Query: 79 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 138
QNS + + +V + V + AP DSPNTDGI S+NV ++D I TGDD V++
Sbjct: 206 QNSQQMHFVISHSDSVRVSDVLVSAPEDSPNTDGIHITGSTNVVLQDCKIGTGDDCVSIV 265
Query: 139 SGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGV 194
+G SS I ++R+ P GI++GS ++G V V+ + L
Sbjct: 266 NG-----------SSNIKMKRIF-CGPGHGISIGSLGKDNSTGMVTKVVLDTAFLRETTN 313
Query: 195 GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKD 254
G+ +KT G G++R + +V MEN + I D P N + ++ IT ++
Sbjct: 314 GLRIKTWQGGHGYVRGVRFENVGMENVANPVIIDQFYCDSPKTCHNQTSAVEISEITYRN 373
Query: 255 VWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQV 307
+ GT + ++ P + I LSNINL+ G + C+ G Y V
Sbjct: 374 ISGTTKSSKAMKFACSDTVPCSNIVLSNINLEKNDG--TEETYCNSAQGFGYGV 425
>gi|157165820|gb|ABV24999.1| polygalacturonase 2 [Oncidium Gower Ramsey]
Length = 483
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 28/276 (10%)
Query: 24 ISKFEKISFIGENGTIDGQGAIWWNMWRQR----------TLPFTRPNLIEFMNSRSIII 73
+K + I+ G +GTI+G+G++WW+ +P +P + F S ++ +
Sbjct: 174 FTKLKGITIQG-SGTIEGRGSVWWSQPEPNDEPISEELGSKMPSIKPTALRFYGSYNVTV 232
Query: 74 SNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDD 133
+ + QNSP ++ C V + +++ +P DSPNTDGI +S +V I +S GDD
Sbjct: 233 TGITIQNSPQCHLKFDNCEAVHVYNMSVTSPGDSPNTDGIHLQNSKDVVIHHCNLSCGDD 292
Query: 134 LVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG----SETSGGVENVLAEHINL 189
V++++G +G+ I V P GI++G T V N+ + +N+
Sbjct: 293 CVSIQTG-----------CNGVKIHNVN-CGPGHGISIGGLGRDNTKACVSNITVQDVNM 340
Query: 190 YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNG 249
Y G+ +KT G G +++I S++ + + I I D K N A ++G
Sbjct: 341 YGTMTGVRIKTWQGGSGSVQSIRFSNIRVSEVQTPIVIDQFYCDRSSCK-NQTAAVALSG 399
Query: 250 ITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 285
I + + GT + + +P + I L+ I LQ
Sbjct: 400 IAYESIKGTYTVKPVHLACSDGTPCSDISLTEIELQ 435
>gi|424883298|ref|ZP_18306926.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WU95]
gi|392514959|gb|EIW39692.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WU95]
Length = 499
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 28/256 (10%)
Query: 37 GTIDGQGAIWWNMWRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
T+ G WW + R+ + P LIE +++ I V +NSP ++ +
Sbjct: 192 ATMAGHDETWWQLARRAQAKGREQNNPRLIEVDHAKEISFYKVKLRNSPNSHVVLNHVEG 251
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V I APADS NTDGID +S ++ I S+I TGDD +A+K+G P+S
Sbjct: 252 ATFWGVQIDAPADSRNTDGIDLGASQDITIAHSFIRTGDDNIALKAG--------NGPTS 303
Query: 154 GITIRRVT---GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRN 210
++I V G G+++GSET GV ++L + L G+ +K++I RGG + N
Sbjct: 304 HVSIVDVHLYWG----HGLSIGSETVAGVSDILVRDVTLDGTTSGLRIKSDISRGGTVSN 359
Query: 211 ITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG--LIQG 268
+ +V + RK I D H DD ++P+ I + +V G +SG +I+G
Sbjct: 360 VRYENVCLRGNRKPI----DFDTHYDDNARGRSIPIYRDIVLHNVVG----ESGTLVIRG 411
Query: 269 LKNSPFTGICLSNINL 284
+ G+ +
Sbjct: 412 QDQAHALGVKFDGVRF 427
>gi|357114981|ref|XP_003559272.1| PREDICTED: polygalacturonase ADPG1-like [Brachypodium distachyon]
Length = 407
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 21/285 (7%)
Query: 37 GTIDGQGAIWW-NMWR-QRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN 93
GTIDG G IWW N + + LP T P + F ++ + N+ +S N+ CS+
Sbjct: 131 GTIDGNGDIWWKNSCKIDKALPCTEAPTALTFHMCDNLTVENIRIVDSQQINLSVEDCSD 190
Query: 94 VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSS 153
V + ++I AP SPNTDGI S +V + D I TGDD ++++ G +
Sbjct: 191 VRLARLSITAPGTSPNTDGIHITRSKDVQVRDCLIKTGDDCMSIEDG-----------TH 239
Query: 154 GITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 209
+ + +V P GI++GS + V + + + LY G VKT G G+ +
Sbjct: 240 NLRVSKVV-CGPGHGISIGSLGDDNSRAEVSGIYIDTVQLYGTTNGARVKTYQGGSGYAK 298
Query: 210 NITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 269
+I ++ M+N + I I + D N ++ + K++ GT V + +
Sbjct: 299 DIVFQNIIMDNVQNPIIIDQNYCDSAKPCKNQELAVEISNVVFKNIRGTTVSKDAIQLNC 358
Query: 270 KNS-PFTGICLSNINLQGVAGPTSPPLKCSDVS-GSAYQVKPWPC 312
NS + I L NINL+ G C + + V P PC
Sbjct: 359 SNSVSCSDIVLENINLKMEGGEGETESTCQNARWRKSGNVSPLPC 403
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,549,322,188
Number of Sequences: 23463169
Number of extensions: 248273831
Number of successful extensions: 531159
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 1312
Number of HSP's that attempted gapping in prelim test: 522686
Number of HSP's gapped (non-prelim): 4513
length of query: 328
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 186
effective length of database: 9,027,425,369
effective search space: 1679101118634
effective search space used: 1679101118634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)