Query 020263
Match_columns 328
No_of_seqs 215 out of 1338
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 08:20:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020263.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020263hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1536 Biotin holocarboxylase 100.0 8.8E-56 1.9E-60 440.3 23.2 282 31-315 291-599 (649)
2 PRK06955 biotin--protein ligas 100.0 2.4E-49 5.3E-54 379.2 21.8 229 92-323 15-268 (300)
3 TIGR00121 birA_ligase birA, bi 100.0 6.2E-49 1.3E-53 364.1 19.9 195 112-313 2-200 (237)
4 COG0340 BirA Biotin-(acetyl-Co 100.0 4E-48 8.7E-53 360.1 19.6 202 115-323 1-209 (238)
5 PRK08330 biotin--protein ligas 100.0 5.6E-47 1.2E-51 351.0 20.1 198 108-323 1-207 (236)
6 PRK11886 bifunctional biotin-- 100.0 1.7E-46 3.7E-51 361.2 21.5 221 92-322 64-289 (319)
7 PTZ00275 biotin-acetyl-CoA-car 100.0 1.9E-45 4.1E-50 350.3 19.4 200 107-313 14-244 (285)
8 PRK13325 bifunctional biotin-- 100.0 4.7E-45 1E-49 377.1 22.6 223 90-322 64-296 (592)
9 PTZ00276 biotin/lipoate protei 100.0 4.2E-45 9E-50 341.0 20.0 191 107-309 4-207 (245)
10 PRK08477 biotin--protein ligas 100.0 4.6E-44 1E-48 327.5 19.2 188 111-324 2-194 (211)
11 PRK05935 biotin--protein ligas 100.0 1.7E-41 3.6E-46 306.1 18.9 161 113-285 6-177 (190)
12 PF03099 BPL_LplA_LipB: Biotin 99.9 1.1E-22 2.4E-27 168.4 7.1 119 115-242 2-125 (125)
13 PRK14348 lipoate-protein ligas 95.2 0.31 6.8E-06 45.5 11.9 120 148-284 79-219 (221)
14 PRK14342 lipoate-protein ligas 93.7 1.4 3E-05 41.0 12.4 118 147-284 69-204 (213)
15 TIGR00214 lipB lipoate-protein 93.2 2.3 4.9E-05 38.7 12.7 116 148-283 50-183 (184)
16 TIGR00545 lipoyltrans lipoyltr 92.3 0.38 8.3E-06 47.2 6.9 64 150-222 73-136 (324)
17 PRK14344 lipoate-protein ligas 91.7 4.1 8.9E-05 38.2 12.6 119 147-283 87-221 (223)
18 PRK14345 lipoate-protein ligas 91.0 5.2 0.00011 37.7 12.6 119 148-284 76-216 (234)
19 PRK14343 lipoate-protein ligas 90.4 5.6 0.00012 37.6 12.2 120 148-285 80-220 (235)
20 PRK14349 lipoate-protein ligas 89.2 9.3 0.0002 35.8 12.5 120 148-284 65-205 (220)
21 COG0095 LplA Lipoate-protein l 88.5 1.2 2.7E-05 41.8 6.5 134 134-284 64-215 (248)
22 PRK14341 lipoate-protein ligas 88.5 11 0.00023 35.1 12.5 116 148-283 70-211 (213)
23 PRK03822 lplA lipoate-protein 87.4 8.3 0.00018 38.2 11.7 126 139-284 68-213 (338)
24 COG0321 LipB Lipoate-protein l 87.1 15 0.00033 34.4 12.5 120 148-285 76-212 (221)
25 PRK14346 lipoate-protein ligas 76.7 55 0.0012 30.9 12.2 60 213-283 155-228 (230)
26 PRK14061 unknown domain/lipoat 72.0 8.4 0.00018 40.8 6.1 123 147-283 295-436 (562)
27 PRK14347 lipoate-protein ligas 71.1 89 0.0019 29.0 12.7 119 148-283 68-208 (209)
28 PF04017 DUF366: Domain of unk 69.2 15 0.00033 33.4 6.3 74 161-246 63-139 (183)
29 COG2029 Uncharacterized conser 64.9 21 0.00046 32.2 6.2 71 209-288 109-180 (189)
30 PF09825 BPL_N: Biotin-protein 22.1 2E+02 0.0044 29.0 5.8 48 20-67 242-292 (367)
No 1
>KOG1536 consensus Biotin holocarboxylase synthetase/biotin-protein ligase [Coenzyme transport and metabolism]
Probab=100.00 E-value=8.8e-56 Score=440.28 Aligned_cols=282 Identities=49% Similarity=0.846 Sum_probs=249.0
Q ss_pred ccccccccccccCCc--cceeeeecccchhHHHH-------HHhhhcCCC-cCCCCCC-ceeEEeccccc-----cCCCC
Q 020263 31 KPFRLSASSAAMDSN--SSCMLVLSGKSLAENEI-------AESLKSNST-LKLPDNS-EVSIHLQSEIV-----KQESF 94 (328)
Q Consensus 31 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~-~~~~~~~~~~~-----~~~~f 94 (328)
+.++..+.+..+..+ ..|.+++|+.++++.|+ ++.+.++++ ++.||+. ++.|.+.+|.. ..+.|
T Consensus 291 ~r~~~k~~a~~l~~d~k~~~sl~~~~~~s~~tei~d~~~~~~~~ld~s~~~~k~~D~s~k~~i~~~~E~di~~~~~s~nF 370 (649)
T KOG1536|consen 291 KRLSEKLLASALECDSKASCSLVLCGFSSAETEIKDTNKEFLKGLDNSNSKLKSPDNSVKFVIILGSEEDILVADDSPNF 370 (649)
T ss_pred HHHHHHHHHhhhccccccCceeEEeeccccchhhhhhHHHHHHhhhhhhhhccCCCcceeEEEEeccccccccccCCCCc
Confidence 334444555555555 67999999999999988 888877766 9999998 89999988753 56899
Q ss_pred CHHHHHhhccccccCceEEEccCCCCHHHHHHHhcCCCC--CceEEEeCcccccccCCCCceecCCCCceeeeeeecCCC
Q 020263 95 DVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHNFCELP--VGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDG 172 (328)
Q Consensus 95 ~~~~~~~~L~t~~~G~~ii~~~~v~STn~~a~~~~~~~~--~g~vviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~~ 172 (328)
|.+.||+.+.|+++|+.++|.|+++|||+++..+..++| .|.+|+|+.||+||||+||.|.||.||++||+.+.++..
T Consensus 371 dl~lY~k~i~tk~~G~~ll~a~V~tST~~ild~n~s~lpse~g~vvv~~~Q~sGRGRGgN~WlsP~G~~~~sf~ism~~k 450 (649)
T KOG1536|consen 371 DLELYFKSINTKRFGRVLLWAPVLTSTMDILDHNFSELPSEVGLVVVANIQTSGRGRGGNVWLSPKGCAMSSFTISMPLK 450 (649)
T ss_pred CHHHHHHHhhhhccCceEEEEeecchHHHHHhhhhhcCCcccceEEEEeEEeecccCCCCeeecCcceEeEEEEEEeecc
Confidence 999999999999999999999999999999999988888 899999999999999999999999999999999987643
Q ss_pred ----CCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceeecC-eEEeEeeceeeccCCcceEEEEEeecCCCCC
Q 020263 173 ----RVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNG-IKVGGILCTSTYRTKKFNVSIGIGLNVNNEE 247 (328)
Q Consensus 173 ----~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~g-kKIgGILvE~~~~~~~~~vVIGIGINvn~~~ 247 (328)
..++++++++.+|+.++++.. .|||+++++||||||||+++ .|||||||.+.+.++.++++|||||||.|..
T Consensus 451 sr~~~~i~~~~~l~~~~~v~~~~~~---pGy~dIpvrIKWPNDlY~~~~lKvgGiLv~st~r~n~f~v~iGCGiNVtN~~ 527 (649)
T KOG1536|consen 451 SRVVPLIPFVQHLALVAVVEAVRYA---PGYPDIPVRIKWPNDLYVNGYLKVGGILVTSTYRSNKFNVSIGCGINVTNDG 527 (649)
T ss_pred cccccchHHHHHHHHHHHHHHHhcC---CCCCCCceeeecCccceeeeccccceEEEEeeecCceEEEEEeeeeEecCCC
Confidence 234556666666666666543 69999999999999999999 9999999999999999999999999999999
Q ss_pred CcchHHHHHHhhhcCC----CCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCeEEeccCC
Q 020263 248 PTTCLNAVLRKLSDST----YQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSCSCQYNFG 315 (328)
Q Consensus 248 p~t~L~~~i~~l~~~~----~~l~re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~v~~~~~~ 315 (328)
|++|||+.+.++++.. ..+.+|+|++++++.||+++..|+++||+.|+++|+++|+|++|.|.+-|.+
T Consensus 528 PT~cLN~ll~~~n~e~~~~~l~~k~EkLiA~~~n~fe~~~k~f~d~G~~silp~YYeyWLHS~Q~V~L~d~~ 599 (649)
T KOG1536|consen 528 PTTCLNDLLDEMNEERNLLHLAIKAEKLIAAVFNKFEKYFKLFMDQGPKSILPLYYEYWLHSNQRVILEDKG 599 (649)
T ss_pred CceeHHHHHHhhchhhccccchhhHHHHHHHHHHHHHHHHHHHHhhCHHhHhHHHHHHHhccCcEEeccCCC
Confidence 9999999998877543 2468999999999999999999999999999999999999999999999887
No 2
>PRK06955 biotin--protein ligase; Provisional
Probab=100.00 E-value=2.4e-49 Score=379.20 Aligned_cols=229 Identities=25% Similarity=0.272 Sum_probs=185.7
Q ss_pred CCCCHHHHHhhccccccCceEEEccCCCCHHHHHHHhcCC-------CCCceEEEeCcccccccCCCCceecCCC-Ccee
Q 020263 92 ESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHNFCE-------LPVGAVCVADVQFKGRGRSKNAWESPKG-CLMF 163 (328)
Q Consensus 92 ~~f~~~~~~~~L~t~~~G~~ii~~~~v~STn~~a~~~~~~-------~~~g~vviA~~QTaGRGR~gr~W~Sp~G-~L~f 163 (328)
=.++.+.+...+++..+|..++++++++|||+++++.... .++|+||+|++||+||||+||+|+||+| +|||
T Consensus 15 ~~l~~~~i~~~~~~~~~~~~i~~~~~v~STN~~a~~~~~~~~~~~~~~~~g~vvvA~~QTaGRGR~GR~W~Sp~G~~L~~ 94 (300)
T PRK06955 15 WRIDRDRLDAHLAAAARAWPLEIVEETGSTNADLMARLKALPRSADALPAPIVRVAYEQTAGRGRQGRPWFAQPGNALLF 94 (300)
T ss_pred CCCCHHHHHhhcccccCCceEEEEeCCCCHHHHHHHHHHhcccccccCCCCeEEEECccccCCCCCcCcccCCCCCcEEE
Confidence 4689999999997777788899999999999999765432 4789999999999999999999999999 6999
Q ss_pred eeeeecC-CCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCc-ceEEEEEee
Q 020263 164 SFTIQME-DGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKK-FNVSIGIGL 241 (328)
Q Consensus 164 S~~l~~~-~~~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~-~~vVIGIGI 241 (328)
|+++++. ....++.+++++|+|++++|+++.... ..+++||||||||++||||||||+|....++. ..+||||||
T Consensus 95 Si~l~~~~~~~~~~~Lsl~~glAv~~al~~~~~~~---~~~~~iKWPNDIl~~gkKiaGILiE~~~~~~~~~~vVIGIGI 171 (300)
T PRK06955 95 SVACVLPRPVAALAGLSLAVGVALAEALAALPAAL---GQRIALKWPNDLLIAGRKLAGILIETVWATPDATAVVIGIGL 171 (300)
T ss_pred EeEecCCCChHHhhhHHHHHHHHHHHHHHHhhccc---CCceeeeCCceeeECCcEEEEEEEEcccCCCCccEEEEEEEE
Confidence 9999876 445677899999999999999874322 25799999999999999999999998876544 469999999
Q ss_pred cCCCCCC----cchHHHH---------HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCe
Q 020263 242 NVNNEEP----TTCLNAV---------LRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSC 308 (328)
Q Consensus 242 Nvn~~~p----~t~L~~~---------i~~l~~~~~~l~re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~ 308 (328)
||++.++ .++|+.. ...+...+..++|+++++.++++|+++|..|.+.||+.+.++|++++++.||.
T Consensus 172 Nv~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ll~~l~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 251 (300)
T PRK06955 172 NVRRADAVAAEVDALRAREAALARGLPPVALAAACAGANLTDTLAAALNALAPALQAFGADGLAPFAARWHALHAYAGRE 251 (300)
T ss_pred eeCCCccccccccccccccccccccccchhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhhcCCCe
Confidence 9997532 1122110 00011125678999999999999999999999999999999999999999999
Q ss_pred EEecc--CCcccccccc
Q 020263 309 SCQYN--FGFQPFMAVK 323 (328)
Q Consensus 309 v~~~~--~~~~~~~~~~ 323 (328)
|...+ .....+.+++
T Consensus 252 V~v~~~~~~~~~G~~~g 268 (300)
T PRK06955 252 VVLLEDGAELARGVAHG 268 (300)
T ss_pred EEEEECCCcEEEEEEee
Confidence 98753 3334555543
No 3
>TIGR00121 birA_ligase birA, biotin-[acetyl-CoA-carboxylase] ligase region. The protein name suggests that this enzyme transfers biotin only to acetyl-CoA-carboxylase but it also transfers the biotin moiety to other proteins. The apparent orthologs among the eukaryotes are larger proteins that contain a single copy of this domain.
Probab=100.00 E-value=6.2e-49 Score=364.08 Aligned_cols=195 Identities=30% Similarity=0.439 Sum_probs=166.0
Q ss_pred EEEccCCCCHHHHHHHhcCC-CCCceEEEeCcccccccCCCCceecCCCCceeeeeeecC-CCCCcchHHHHHHHHHHHH
Q 020263 112 LIWSPRLPSTHDVVSHNFCE-LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQME-DGRVVPLLQYVASLALTEA 189 (328)
Q Consensus 112 ii~~~~v~STn~~a~~~~~~-~~~g~vviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~-~~~~l~~ls~~~~lAV~~a 189 (328)
++++++++|||+++++++.. .++|++|+|++||+||||+||+|+||+|+||||++++++ +...++.+++++|+||+++
T Consensus 2 i~~~~~~~STn~~~~~~~~~~~~~~~vv~A~~QTaGRGR~gr~W~Sp~g~l~~S~~l~~~~~~~~~~~ls~~~~lAv~~a 81 (237)
T TIGR00121 2 VIVLDVIDSTNQYALELAKEGKLKGDLVVAEYQTAGRGRRGRKWLSPEGGLYFSLILRPDLPKSPAPGLTLVAGIAIAEV 81 (237)
T ss_pred EEEEeecCCHHHHHHHHHhcCCCCCeEEEEcccCCCCCCCCCcccCCCCceEEEEEECCCCChhHhhhhHHHHHHHHHHH
Confidence 67899999999999987653 358999999999999999999999999999999999876 3456778999999999999
Q ss_pred HHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCc-ceEEEEEeecCCCCCCcchHHHHHHhhh-cCCCCCC
Q 020263 190 INYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKK-FNVSIGIGLNVNNEEPTTCLNAVLRKLS-DSTYQFR 267 (328)
Q Consensus 190 L~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~-~~vVIGIGINvn~~~p~t~L~~~i~~l~-~~~~~l~ 267 (328)
|+++. .+++||||||||++|+||||||+|.....+. ..+||||||||+++.+...+......+. ..+..++
T Consensus 82 l~~~~-------~~~~iKWPNDI~~~~kKi~GIL~E~~~~~~~~~~vviGIGiNv~~~~~~~~~~~~a~sl~~~~~~~~~ 154 (237)
T TIGR00121 82 LKELG-------DQVQVKWPNDILLKDKKLGGILTELTGKENRADYVVIGIGINVQNRKPAESLREQAISLSEEAGIDLD 154 (237)
T ss_pred HHHhC-------CCCCCcCCceEEECCeEEEEEEEEcccCCCCcCEEEEEEEEccCCCCCchhhcccceehHHhhCCCCC
Confidence 99863 4789999999999999999999998765543 5699999999997644333322111121 2357899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCeEEecc
Q 020263 268 REDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSCSCQYN 313 (328)
Q Consensus 268 re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~v~~~~ 313 (328)
|++|++.++++|+++|..|.+.||+++.++|++++++.||.|...+
T Consensus 155 ~~~ll~~l~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~g~~V~v~~ 200 (237)
T TIGR00121 155 RGELIEGFLRNFEENLEWFEQEGIDEILSKWEKLSAHIGREVSLTT 200 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHhhhccCCeEEEEe
Confidence 9999999999999999999999999999999999999999998863
No 4
>COG0340 BirA Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]
Probab=100.00 E-value=4e-48 Score=360.06 Aligned_cols=202 Identities=30% Similarity=0.466 Sum_probs=172.5
Q ss_pred ccCCCCHHHHHHHhcC-CCCCceEEEeCcccccccCCCCceecCCC-CceeeeeeecC-CCCCcchHHHHHHHHHHHHHH
Q 020263 115 SPRLPSTHDVVSHNFC-ELPVGAVCVADVQFKGRGRSKNAWESPKG-CLMFSFTIQME-DGRVVPLLQYVASLALTEAIN 191 (328)
Q Consensus 115 ~~~v~STn~~a~~~~~-~~~~g~vviA~~QTaGRGR~gr~W~Sp~G-~L~fS~~l~~~-~~~~l~~ls~~~~lAV~~aL~ 191 (328)
+++++|||+++++++. +.+.+++|+|++||+||||+||.|+||+| +||||+++++. +...++.+++++|+||++||+
T Consensus 1 ~~~i~STn~~a~~~~~~~~~~~~vvvA~~QTaGRGR~GR~W~Sp~G~~l~~S~~l~~~~~~~~~~~lsl~~g~av~~al~ 80 (238)
T COG0340 1 FDEIDSTNTEAKERAASGAPEGTVVVAEEQTAGRGRRGRKWSSPKGGGLYMSLLLRPDLPPAELPSLSLVAGLAVAEALR 80 (238)
T ss_pred CCccchHHHHHHHHHHhCCCCCcEEEEeeeccCcCCCCCcccCCCCCCEEEEEEEcCCcChhhcchhHHHHHHHHHHHHH
Confidence 4789999999998874 57788899999999999999999999998 89999999887 446789999999999999999
Q ss_pred HhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCC-cceEEEEEeecCCCCCCc-chHHHHHHhhhcCCCCCCHH
Q 020263 192 YVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTK-KFNVSIGIGLNVNNEEPT-TCLNAVLRKLSDSTYQFRRE 269 (328)
Q Consensus 192 ~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~-~~~vVIGIGINvn~~~p~-t~L~~~i~~l~~~~~~l~re 269 (328)
++. .+++||||||||++|||+||||+|+....+ ...+||||||||++..|+ ..+.+....+.+....++|+
T Consensus 81 ~~~-------~~~~iKWPNDv~~~~kKl~GIL~E~~~~~~~~~~~viGIGINv~~~~~~~~~i~~~atsL~~~~~~~~r~ 153 (238)
T COG0340 81 KFG-------IDVRIKWPNDVLLNGKKLAGILVEAVGDENGLLAVVVGIGINVNNPPPDFEDIGQPATSLQEEGEEIDRE 153 (238)
T ss_pred HhC-------cccCccCCcceeECCcceEEEEEeeeecCCCceEEEEEEEEeeccCCcchhhhhhhhhhHHhhhCCCCHH
Confidence 974 589999999999999999999999987654 457999999999997653 23333333333323689999
Q ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCeEEeccCC--cccccccc
Q 020263 270 DVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSCSCQYNFG--FQPFMAVK 323 (328)
Q Consensus 270 ~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~v~~~~~~--~~~~~~~~ 323 (328)
+|++.++++|+.+|..|.+.||.+|.+.|++++++.|+.|.+...+ ..-++|.+
T Consensus 154 ~l~~~ll~~l~~~~~~~~~~~~~~i~~~~~~~~~~~g~~V~~~~~~~~~~gg~a~~ 209 (238)
T COG0340 154 ELLAKLLKELEKYLRQFLREGFAPILARWRARSLSLGKEVRLTLGGGVIFGGIAKG 209 (238)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHhccCCCEEEEEeCCCcEeeeEEEE
Confidence 9999999999999999999999999999999999999999998665 33335543
No 5
>PRK08330 biotin--protein ligase; Provisional
Probab=100.00 E-value=5.6e-47 Score=351.02 Aligned_cols=198 Identities=28% Similarity=0.394 Sum_probs=167.5
Q ss_pred cCceEEEccCCCCHHHHHHHhcCCCCCceEEEeCcccccccCCCCceecCCCCceeeeeeecC-CCCCcchHHHHHHHHH
Q 020263 108 FGRLLIWSPRLPSTHDVVSHNFCELPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQME-DGRVVPLLQYVASLAL 186 (328)
Q Consensus 108 ~G~~ii~~~~v~STn~~a~~~~~~~~~g~vviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~-~~~~l~~ls~~~~lAV 186 (328)
+|+.++++++++|||+++++.....++|++|+|++||+||||+||+|+||+|+||||++++++ ....++.+++++++||
T Consensus 1 ~g~~i~~~~~v~STn~~~~~~~~~~~~~~vv~A~~QT~GrGR~gr~W~Sp~G~l~~S~~l~~~~~~~~~~~l~~~~~~av 80 (236)
T PRK08330 1 IGRNIIYFDEVDSTNEYAKRIAPDEEEGTVIVADRQTAGHGRKGRAWASPEGGLWMSVILKPKVSPEHLPKLVFLGALAV 80 (236)
T ss_pred CCceEEEEcccCcHHHHHHHHhcCCCCCEEEEECccccCCCCCCCeeeCCCCCeEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 478899999999999999988767789999999999999999999999999999999999875 3345778999999999
Q ss_pred HHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCcceEEEEEeecCCCCCCc------chHHHHHHhhh
Q 020263 187 TEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEEPT------TCLNAVLRKLS 260 (328)
Q Consensus 187 ~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~~~vVIGIGINvn~~~p~------t~L~~~i~~l~ 260 (328)
+++|+++ | +++++|||||||++|+||||||+|... ..++|||||||+++.|. +++..
T Consensus 81 ~~~l~~~----g---~~~~iKWPNDI~~~~kKi~GILiE~~~----~~~viGiGiNv~~~~p~~l~~~atsL~~------ 143 (236)
T PRK08330 81 VDTLREF----G---IEGKIKWPNDVLVNYKKIAGVLVEGKG----DFVVLGIGLNVNNEIPDELRETATSMKE------ 143 (236)
T ss_pred HHHHHHc----C---CCccccCCCeEEECCeEEEEEeEEEeC----CEEEEEEEEecCCCCCcccccccccHHH------
Confidence 9999985 3 578999999999999999999999762 26899999999975443 33322
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCeEEeccCC-c-ccccccc
Q 020263 261 DSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSCSCQYNFG-F-QPFMAVK 323 (328)
Q Consensus 261 ~~~~~l~re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~v~~~~~~-~-~~~~~~~ 323 (328)
..+..++++++++.++++|+++|..|.+++ +++.++|++++++.|+.|.....+ . ..+.|++
T Consensus 144 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~g~~v~~~~~~~~~~~G~~~g 207 (236)
T PRK08330 144 VLGREVPLIEVFKRLVENLDRWYKLFLEGP-GEILEEVKGRSMILGKRVKIIGDGEILVEGIAED 207 (236)
T ss_pred hhCCCCCHHHHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHhcCCeEEEEECCcEEEEEEEEE
Confidence 125678999999999999999999998866 899999999999999999876433 3 2465554
No 6
>PRK11886 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; Provisional
Probab=100.00 E-value=1.7e-46 Score=361.15 Aligned_cols=221 Identities=26% Similarity=0.354 Sum_probs=181.4
Q ss_pred CCCCHHHHHhhccccccCceEEEccCCCCHHHHHHHhcCCCCCceEEEeCcccccccCCCCceecCCC-CceeeeeeecC
Q 020263 92 ESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHNFCELPVGAVCVADVQFKGRGRSKNAWESPKG-CLMFSFTIQME 170 (328)
Q Consensus 92 ~~f~~~~~~~~L~t~~~G~~ii~~~~v~STn~~a~~~~~~~~~g~vviA~~QTaGRGR~gr~W~Sp~G-~L~fS~~l~~~ 170 (328)
..+++..+...+. |..++++++++|||+++++.+.+.++|+||+|++||+||||+||+|+||+| +||||++++++
T Consensus 64 ~~l~~~~l~~~l~----~~~i~~~~~v~STn~~~~e~~~~~~~~~vv~A~~Qt~GrGR~gr~W~Sp~g~~L~~S~~~~~~ 139 (319)
T PRK11886 64 DLLDPERISSQLP----PGRVTVLPVIDSTNQYLLDRIAELKSGDLCLAEYQTAGRGRRGRQWFSPFGGNLYLSLYWRLN 139 (319)
T ss_pred ccCCHHHHHhhCC----CCeEEEEeCCCCHHHHHHHhhcCCCCCcEEEECccCCCCCCCCCcccCCCCCCEEEEEEeCCC
Confidence 5688877776553 577899999999999999887667899999999999999999999999999 69999999876
Q ss_pred -CCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCC-cceEEEEEeecCCCCCC
Q 020263 171 -DGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTK-KFNVSIGIGLNVNNEEP 248 (328)
Q Consensus 171 -~~~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~-~~~vVIGIGINvn~~~p 248 (328)
....++.+++++|+||+++|+++. ..+++||||||||++|+||||||+|.....+ ...+|||||||||++.+
T Consensus 140 ~~~~~~~~l~l~~~~av~~al~~~~------~~~~~iKWPNDI~~~~kKl~GIL~E~~~~~~~~~~~viGIGiNv~~~~~ 213 (319)
T PRK11886 140 QGPAQAMGLSLVVGIAIAEALRRLG------AIDVGLKWPNDIYLNDRKLAGILVELSGETGDAAHVVIGIGINVAMPDF 213 (319)
T ss_pred CChHHHhhHHHHHHHHHHHHHHHhc------CCCcceeCCceeeECCeeEEEEEEEeccCCCCccEEEEEEEEccCCCCC
Confidence 344667899999999999999874 2478999999999999999999999875544 45799999999998532
Q ss_pred cch-HHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCeEEeccCC-ccccccc
Q 020263 249 TTC-LNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSCSCQYNFG-FQPFMAV 322 (328)
Q Consensus 249 ~t~-L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~v~~~~~~-~~~~~~~ 322 (328)
... +......+.+.+..+++++|++.++++|+.+|..|.+.||+++.++|+++|++.||.|...+.+ -..+.++
T Consensus 214 ~~~~~~~~~~sl~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~G~~~ 289 (319)
T PRK11886 214 PEELIDQPWSDLQEAGPTIDRNQLAAELIKQLRAALELFEQEGLAPFLERWKKLDLFLGREVKLIIGDKEISGIAR 289 (319)
T ss_pred chhhhccceeeHhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhccccCCeEEEEeCCcEEEEEEE
Confidence 211 2211122222256899999999999999999999999999999999999999999999987433 3344444
No 7
>PTZ00275 biotin-acetyl-CoA-carboxylase ligase; Provisional
Probab=100.00 E-value=1.9e-45 Score=350.26 Aligned_cols=200 Identities=22% Similarity=0.302 Sum_probs=162.7
Q ss_pred ccCceEEEccCCCCHHHHHHHhc----C-CC--CCce-EEEeCcccccccCC------CCceecCCCCceeeeeeecC--
Q 020263 107 RFGRLLIWSPRLPSTHDVVSHNF----C-EL--PVGA-VCVADVQFKGRGRS------KNAWESPKGCLMFSFTIQME-- 170 (328)
Q Consensus 107 ~~G~~ii~~~~v~STn~~a~~~~----~-~~--~~g~-vviA~~QTaGRGR~------gr~W~Sp~G~L~fS~~l~~~-- 170 (328)
.+|..++|+++++|||++++++. . +. ++++ ||+|++||+||||+ ||+|+||+|+||||++++++
T Consensus 14 ~~~~~~~~~~~v~STN~~a~~~~~~~~~~g~~~~~~~~vv~A~~QT~GRGR~~~~~~~gR~W~Sp~G~L~~S~~l~~~~~ 93 (285)
T PTZ00275 14 ELNALRLHFDVLDSTQLYCKRNMKRFIQNGKLQDDNMIIVSCNEQTNGIGTRDTKKNQDRIWLSEKGNLFTTFVFLWNRN 93 (285)
T ss_pred hcCcEEEEEcccCcHHHHHHHhHHHHhhcCCcCCCCeEEEEECcccCCCCcCCCCCCCCCEEECCCCceEEEEEEecCCc
Confidence 57899999999999999998853 1 22 4664 66799999999997 99999999999999999654
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccC-------CcceEEEEEeecC
Q 020263 171 DGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRT-------KKFNVSIGIGLNV 243 (328)
Q Consensus 171 ~~~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~-------~~~~vVIGIGINv 243 (328)
..+..+.+++++|+||+++|+.+ + .+++||||||||++||||||||+|+.... +...+||||||||
T Consensus 94 ~~~~~~~Lsl~~alAv~~~L~~~----~---~~~~IKWPNDI~~~~kKiaGILiE~~~~~~~~~~~~~~~~vViGIGINv 166 (285)
T PTZ00275 94 DIEKVKYLAQTCTVAISKTLEYF----H---LVTQIKWINDVLVNYKKIAGCLVHLYYLDDFPNLNSRYVCVMVGIGINV 166 (285)
T ss_pred CHhHhHHHHHHHHHHHHHHHHHh----C---CceeEECCCccccCCcEEEEEEEeeeeccccccccCceeEEEEEEEEec
Confidence 34557789999999999999885 2 57999999999999999999999987532 2346999999999
Q ss_pred CCCCC-------cchHHHHHHh-hhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCeEEecc
Q 020263 244 NNEEP-------TTCLNAVLRK-LSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSCSCQYN 313 (328)
Q Consensus 244 n~~~p-------~t~L~~~i~~-l~~~~~~l~re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~v~~~~ 313 (328)
|+..+ .++|...... ....+...++++|++.++++|+.+|..|.+.||+.+.++|++++++.||.|...+
T Consensus 167 n~~~~~~~~~~~atSL~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~~~~~~g~~~i~~~~~~~~~~~g~~V~v~~ 244 (285)
T PTZ00275 167 TLEDKHNLLNNNYTSIKKELQRDFNTPKSIPSVEQVTEKLIINLKAVINKLRKEGFSSFLDYITPRLLYKDKKVLIDQ 244 (285)
T ss_pred CCCCCcccccCCcccHHHHhCcccccccCCCCHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHhccCCCEEEEEe
Confidence 87532 2455432211 0001224579999999999999999999999999999999999999999998764
No 8
>PRK13325 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/pantothenate kinase; Reviewed
Probab=100.00 E-value=4.7e-45 Score=377.11 Aligned_cols=223 Identities=22% Similarity=0.303 Sum_probs=182.1
Q ss_pred cCCCCCHHHHHhhccccccCceEEEccCCCCHHHHHHHhcC---CCCCceEEEeCcccccccCCCCceecCCC-Cceeee
Q 020263 90 KQESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHNFC---ELPVGAVCVADVQFKGRGRSKNAWESPKG-CLMFSF 165 (328)
Q Consensus 90 ~~~~f~~~~~~~~L~t~~~G~~ii~~~~v~STn~~a~~~~~---~~~~g~vviA~~QTaGRGR~gr~W~Sp~G-~L~fS~ 165 (328)
....+|.+.+...|.+. +..+.++++++|||+++++... ..++|+||+|++||+||||+||+|+||+| +||||+
T Consensus 64 ~~~lL~~~~I~~~l~~~--~~~i~~~~~idSTN~~~~~~~~~~~~~~~g~vvvAe~QTaGRGRrGR~W~Sp~G~~Ly~S~ 141 (592)
T PRK13325 64 PLAVFDAEGLRELGERS--GFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSF 141 (592)
T ss_pred ccccCCHHHHHHhhhcC--CCcEEEEeCCCCHHHHHHHHHhhccCCCCCeEEEECccCCCCCCCCCcccCCCCCcEEEEe
Confidence 34679999999999654 6778999999999999998653 25789999999999999999999999999 699999
Q ss_pred eeecC-CCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCcceEEEEEeecCC
Q 020263 166 TIQME-DGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVN 244 (328)
Q Consensus 166 ~l~~~-~~~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~~~vVIGIGINvn 244 (328)
+++++ ....++.+++++|+||+++|+++ | ++++||||||||++||||||||+|....++..++||||||||+
T Consensus 142 ~l~~~~~~~~~~~Lsl~vgvAv~~aL~~~----g---~~v~lKWPNDIl~~gkKlaGILiE~~~~~~~~~vVIGIGINv~ 214 (592)
T PRK13325 142 GWVFDRPQYELGSLSPVAAVACRRALSRL----G---LKTQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFV 214 (592)
T ss_pred eecCCCChhhhhhHHHHHHHHHHHHHHHc----C---CCceEeCcceEEECCceEEEEEEeeeecCCCcEEEEEEEEeeC
Confidence 99876 34567889999999999999985 3 4799999999999999999999998854555679999999998
Q ss_pred CCCC---cchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCeEEeccC--Ccccc
Q 020263 245 NEEP---TTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSCSCQYNF--GFQPF 319 (328)
Q Consensus 245 ~~~p---~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~v~~~~~--~~~~~ 319 (328)
.+.. ..++... .........++|+++++.++++|++.|..|.+.||++|.++|++++++.||.|..... ....+
T Consensus 215 ~p~~~~~~~~~~sL-~~~~~~~~~~dr~~ll~~ll~~l~~~l~~~~~~g~~~~~~~w~~~~~~~gk~V~v~~~~~~~~~G 293 (592)
T PRK13325 215 LPKEVENAASVQSL-FQTASRRGNADAAVLLETLLAELDAVLLQYARDGFAPFVAEYQAANRDHGKAVLLLRDGETVFEG 293 (592)
T ss_pred CCcccccCcChHHH-HhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCeEEEEeCCCcEEEE
Confidence 6421 1111111 1111112468999999999999999999999999999999999999999999987632 23455
Q ss_pred ccc
Q 020263 320 MAV 322 (328)
Q Consensus 320 ~~~ 322 (328)
.++
T Consensus 294 i~~ 296 (592)
T PRK13325 294 TVK 296 (592)
T ss_pred EEE
Confidence 544
No 9
>PTZ00276 biotin/lipoate protein ligase; Provisional
Probab=100.00 E-value=4.2e-45 Score=341.01 Aligned_cols=191 Identities=26% Similarity=0.368 Sum_probs=152.0
Q ss_pred ccCceEEEccCCCCHHHHHHHhcCC-CCCceEEEeCcccccccCCCCceecCCCCceeeeeeecC--CCCCcchHHHHHH
Q 020263 107 RFGRLLIWSPRLPSTHDVVSHNFCE-LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQME--DGRVVPLLQYVAS 183 (328)
Q Consensus 107 ~~G~~ii~~~~v~STn~~a~~~~~~-~~~g~vviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~--~~~~l~~ls~~~~ 183 (328)
..|..++++++++|||+++++.... ..+|++|+|++||+||||+||+|.||+|+||||+++++. +....+++++++|
T Consensus 4 ~~~~~i~~~~~v~STN~~ak~~~~~~~~~~~vviA~~QT~GRGR~gR~W~Sp~g~l~~S~~l~~~~~~~~~~~~lsl~~a 83 (245)
T PTZ00276 4 DVPPNIHFVGEVTSTMDVARTMLAAAGGKPFAVLAESQTAGRGTGGRTWTSPKGNMYFTLCIPQKGVPPELVPVLPLITG 83 (245)
T ss_pred CCCceEEEEeCCCCHHHHHHHHHhcCCCCCeEEEECCCCCCCCCCCCcccCCCCCeEEEEEECCCccChhHhhHHHHHHH
Confidence 4577899999999999999987543 468899999999999999999999999999999999764 3345678999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCcceEEEEEeecCCCCC--C-----cchHHHHH
Q 020263 184 LALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEE--P-----TTCLNAVL 256 (328)
Q Consensus 184 lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~~~vVIGIGINvn~~~--p-----~t~L~~~i 256 (328)
+|+++||++++. +++++||||||||++|||+||||+|+..+ .+||||||||+..+ | .++++...
T Consensus 84 lav~~al~~~~~-----~~~~~iKWPNDI~~~~kKiaGILiE~~~~----~vvIGIGINv~~~~~~~~~~~~~~~l~sl~ 154 (245)
T PTZ00276 84 LACRAAIMEVLH-----GAAVHTKWPNDIIYAGKKIGGSLIESEGE----YLIIGIGMNIEVAPPVTDAGRESTMVNEIA 154 (245)
T ss_pred HHHHHHHHHhcc-----CCceEEEcCCeeEECCcEEEEEEEcccCC----EEEEEEEEeeCCCCCCCccccccccHHHHH
Confidence 999999998742 36899999999999999999999997642 68999999998632 1 22232221
Q ss_pred HhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHH---HHHhccCCeE
Q 020263 257 RKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYY---KTWLHRFSCS 309 (328)
Q Consensus 257 ~~l~~~~~~l~re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~---~~wlh~~Q~v 309 (328)
.+. .+..++|++|++.++++|+++|..+. .+++.+.+.|. .+|...++.+
T Consensus 155 ~~~--~~~~~~r~~l~~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 207 (245)
T PTZ00276 155 EDL--GVKSVTPQDLAEAVWKHFFDICSDPE-LTREILIESFDAAMDKSLKLHKRT 207 (245)
T ss_pred Hhh--CCCCCCHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHhhhhccCeEE
Confidence 111 23578999999999999998886532 23467888776 7777666644
No 10
>PRK08477 biotin--protein ligase; Provisional
Probab=100.00 E-value=4.6e-44 Score=327.49 Aligned_cols=188 Identities=24% Similarity=0.350 Sum_probs=150.6
Q ss_pred eEEEccCCCCHHHHHHHhcCC--CCCceEEEeCcccccccCCCCceecCCCCceeeeeeecCC-CCCcc--hHHHHHHHH
Q 020263 111 LLIWSPRLPSTHDVVSHNFCE--LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMED-GRVVP--LLQYVASLA 185 (328)
Q Consensus 111 ~ii~~~~v~STn~~a~~~~~~--~~~g~vviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~-~~~l~--~ls~~~~lA 185 (328)
.++++++++|||++++++... .++|++|+|++||+||||+||+|.||+|+||||++++++. ....+ .+++++|+|
T Consensus 2 ~i~~~~~v~STn~~~~~~~~~~~~~~~~vvvA~~QTaGRGR~gR~W~Sp~G~L~~S~~l~~~~~~~~~~~~~lsl~~~~a 81 (211)
T PRK08477 2 EIRVFESLDSTQTYLIEKIKNGELKAPFAIVAKEQTAGIGSRGNSWEGKKGNLFFSFALKESDLPKDLPLQSSSIYFGFL 81 (211)
T ss_pred eEEEecCCCCHHHHHHHHHHcCCCCCCEEEEECccCCCCCCCCCcccCCCCCeEEEeecCCCcchhhhhhHHHHHHHHHH
Confidence 468899999999999987642 4789999999999999999999999999999999998763 23333 378899999
Q ss_pred HHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCcceEEEEEeecCCCCCCcchHHHHHHhhhcCCCC
Q 020263 186 LTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTTCLNAVLRKLSDSTYQ 265 (328)
Q Consensus 186 V~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~~~vVIGIGINvn~~~p~t~L~~~i~~l~~~~~~ 265 (328)
|+++|+++ | .+++||||||||++|+|+||||+|.... .+||||||||++.++.. .. .+..
T Consensus 82 v~~~l~~~----~---~~~~iKWPNDI~~~~kKi~GIL~E~~~~----~vviGiGiNv~~~p~~~------~~---l~~~ 141 (211)
T PRK08477 82 LKEVLKEL----G---SKVWLKWPNDLYLDDKKIGGVITNKIKN----FIVCGIGLNLKFSPKNF------AC---LDIE 141 (211)
T ss_pred HHHHHHHh----C---CCeEEcCCCeeEECCcEEEEEEEeecCC----eEEEEEEEeeCCCCCcc------cc---ccCc
Confidence 99999874 2 5799999999999999999999997532 58999999998643211 11 1357
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhccCCeEEeccCCccccccccc
Q 020263 266 FRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHRFSCSCQYNFGFQPFMAVKC 324 (328)
Q Consensus 266 l~re~Lla~il~~fe~~~~~~~~~gf~~l~~~y~~~wlh~~Q~v~~~~~~~~~~~~~~~ 324 (328)
++|++|++.++++|++.|. +..+.+.|+..|....++-+.-+.....+.|++.
T Consensus 142 ~~~~~ll~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~v~v~~~~~~~~g~a~~I 194 (211)
T PRK08477 142 ISDDLLLEGFLQKIEKKIL------WKQIFSKYKLEFEKSKSFSFHIDGKLVSLKDAEL 194 (211)
T ss_pred CCHHHHHHHHHHHHHHHHh------HHHHHHHHHHHHHcCCEEEEEECCEEEEEEEeeE
Confidence 8999999999999999882 3567778887775555555555666777777653
No 11
>PRK05935 biotin--protein ligase; Provisional
Probab=100.00 E-value=1.7e-41 Score=306.14 Aligned_cols=161 Identities=24% Similarity=0.331 Sum_probs=128.5
Q ss_pred EEccCCCCHHHHHHHhcC-C-CCCceEEEeCcccccccCCCCceecCCCCceeeeeeecCC-CCCcchHHHHHHHHHHHH
Q 020263 113 IWSPRLPSTHDVVSHNFC-E-LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMED-GRVVPLLQYVASLALTEA 189 (328)
Q Consensus 113 i~~~~v~STn~~a~~~~~-~-~~~g~vviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~-~~~l~~ls~~~~lAV~~a 189 (328)
+++++++|||++++++.. + .++|++|+|++||+||||+||+|+||+|+||||++++++. ......+..++++|++++
T Consensus 6 ~~~~~v~STN~~~~~~~~~~~~~~~~vv~A~~QTaGRGR~GR~W~Sp~G~L~~Si~l~~~~~~~~~~~~~~l~~~av~~~ 85 (190)
T PRK05935 6 YEIAETPSTNTTAKEGMHLWDPYALTVISTREQTAGKGKFGKSWHSSDQDLLASFCFFITVLNIDVSLLFRLGTEAVMRL 85 (190)
T ss_pred EeCCCCCcHHHHHHHHHhcCCCCCCEEEEECccCCCCCCCCCeeeCCCCCeEEEEEEccCCCCcCHHHHHHHHHHHHHHH
Confidence 445899999999998763 2 3478999999999999999999999999999999996542 223445556677899999
Q ss_pred HHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCcceEEEEEeecCCCCC--------CcchHHHHHHhhhc
Q 020263 190 INYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEE--------PTTCLNAVLRKLSD 261 (328)
Q Consensus 190 L~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~~~vVIGIGINvn~~~--------p~t~L~~~i~~l~~ 261 (328)
++++ +. .+++||||||||++|||+||||+|....++...+||||||||++.+ +.+++...
T Consensus 86 l~~~----~~--~~~~iKWPNDI~~~~kKi~GILiE~~~~~~~~~vVIGIGINv~~~~~~~~~~~~~atsL~~~------ 153 (190)
T PRK05935 86 GEDL----GI--TEAVIKWPNDVLVHGEKLCGVLCETIPVKGGLGVILGIGVNGNTTKDELLGIDQPATSLQEL------ 153 (190)
T ss_pred HHHh----CC--ccccccCCCeEEECCcEEEEEEEeccccCCCcEEEEEEeEecCCCchhccccCCCcccHHHh------
Confidence 9875 21 3699999999999999999999998765555579999999998641 23444322
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 020263 262 STYQFRREDVIAAFFNKFETFYDT 285 (328)
Q Consensus 262 ~~~~l~re~Lla~il~~fe~~~~~ 285 (328)
.+..++|+++++.++++|++.|..
T Consensus 154 ~~~~~~~~~l~~~l~~~l~~~~~~ 177 (190)
T PRK05935 154 LGHPIDLEEQRERLIKHIKHVLIQ 177 (190)
T ss_pred hCCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999988755
No 12
>PF03099 BPL_LplA_LipB: Biotin/lipoate A/B protein ligase family This entry is just a subset of the Pfam family; InterPro: IPR004143 This domain is found in biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organism probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine []. Lipoate-protein ligase A (LPLA) (octanoyltransferase) catalyses the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes [].; GO: 0003824 catalytic activity, 0006464 protein modification process; PDB: 2ARU_A 2C8M_B 2C7I_A 3R07_A 2ARS_A 2ART_A 3FJP_A 3EFR_B 2EAY_B 3EFS_B ....
Probab=99.87 E-value=1.1e-22 Score=168.43 Aligned_cols=119 Identities=39% Similarity=0.573 Sum_probs=89.6
Q ss_pred ccCCCCH-HHHHHHhcCCCCCceEEEeCcccccccCCCCceecCCCCceeeeeeecCCC----CCcchHHHHHHHHHHHH
Q 020263 115 SPRLPST-HDVVSHNFCELPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDG----RVVPLLQYVASLALTEA 189 (328)
Q Consensus 115 ~~~v~ST-n~~a~~~~~~~~~g~vviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~~----~~l~~ls~~~~lAV~~a 189 (328)
.++++|| .....+ ..+.+.++++++||+|| |.|+||+|+|+||++++.+.. ..++.+...+.+++.++
T Consensus 2 g~~~~st~~~~~~~---~~~~~~v~v~~rqtgG~----~~w~~p~g~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (125)
T PF03099_consen 2 GYFQDSTKEELNQE---ELKEGGVPVARRQTGGR----RVWHSPPGNLYFSLILPPDDPNFPPSDIPSYILLAALAVLEA 74 (125)
T ss_dssp ETTBSHHHHHHHHH---HHHCTTEEEEEESSSSB----EEEEBTTTEEEEEEEEETTTTTHHGGGHHHHHHHHHHHHHHH
T ss_pred cCeECHHHHHHHHh---cCccCCEEEEEEeeCCc----ceeeeCCcEEEEEEEEccccccccchhhhHHHHHHHHHHHHH
Confidence 5688999 333333 34567889999999999 999999999999999987532 23455566677778888
Q ss_pred HHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCcceEEEEEeec
Q 020263 190 INYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLN 242 (328)
Q Consensus 190 L~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~~~vVIGIGIN 242 (328)
+..+. .+.++..+++||||||++++|||||||+|.........++||||+|
T Consensus 75 l~~~~--~~~~~~~~~~kw~nDi~~~~kKi~Gil~~~~~~~~~~~~~igig~N 125 (125)
T PF03099_consen 75 LGEFG--PGEPGIDCFIKWPNDIYVNGKKIAGILQERRRGGILHHGSIGIGIN 125 (125)
T ss_dssp HHHTT--HTTTTSSEEEETTTEEEETTEEEEEEEEEEETTEEEEEEEEESSEE
T ss_pred hhhhc--cccCCCceEEeCCCCccCCCcEEEEEeEeeeCCcEEEEEEEEEecC
Confidence 75221 1233578999999999999999999999998633334577888776
No 13
>PRK14348 lipoate-protein ligase B; Provisional
Probab=95.24 E-value=0.31 Score=45.47 Aligned_cols=120 Identities=18% Similarity=0.144 Sum_probs=76.3
Q ss_pred cCCCCceecCCCCceeeeeeecCCCCCcchHHHHH--HHHHHHHHHHhhhcCCCCCCCceeeecCceeec-----CeEEe
Q 020263 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVA--SLALTEAINYVCSRDGLPCLDIKIKWPNDLYLN-----GIKVG 220 (328)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~--~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~-----gkKIg 220 (328)
.|+|...+--||.|..=.++..... ....-.|+- --++.+++++ +|++ ..+.+..-.||++ ++|||
T Consensus 79 ~RGG~iTyHGPGQlV~Ypil~L~~~-~~~v~~yv~~lE~~vI~~l~~----~gi~--~~~~~~~~GVWv~~~~~~~~KIa 151 (221)
T PRK14348 79 DRGGDITYHGPGQLVCYPILNLEEF-GLGLKEYVHLLEEAVIRVCAS----YGVV--AGRLEKATGVWLEGDTSRARKIC 151 (221)
T ss_pred CCCCceEEECCCeEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHH----cCCc--eeecCCCCCEEecCCCCCCCcEE
Confidence 6889988888998766666665421 122222332 3355566655 3543 2466788899997 58999
Q ss_pred EeeceeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 020263 221 GILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYD 284 (328)
Q Consensus 221 GILvE~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~ 284 (328)
.|=+-... ..-.=|+.|||+++. +.||+.+. .+..++.+++...+.++|.+.++
T Consensus 152 aIGv~v~r----~vT~HG~ALNv~~dL~~F~~IvPCGl~~~~vTSl~~~------~g~~~~~~~v~~~l~~~f~~~~~ 219 (221)
T PRK14348 152 AIGVRSSH----YVTMHGLALNVNTDLRYFSYIHPCGFIDKGVTSLQQE------LGHSIDMAEVKERLGRELLAALL 219 (221)
T ss_pred EEeEEecc----ceeecceEEEecCChHHhccCccCCCCCCcEEeeHHH------hCCCCCHHHHHHHHHHHHHHHHc
Confidence 87655431 111249999998741 24565432 24578889999999999887653
No 14
>PRK14342 lipoate-protein ligase B; Provisional
Probab=93.71 E-value=1.4 Score=40.96 Aligned_cols=118 Identities=16% Similarity=0.207 Sum_probs=72.6
Q ss_pred ccCCCCceecCCCCceeeeeeecCCCCCcchHHHHHH--HHHHHHHHHhhhcCCCCCCCceeeecC--ceeecCeEEeEe
Q 020263 147 RGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVAS--LALTEAINYVCSRDGLPCLDIKIKWPN--DLYLNGIKVGGI 222 (328)
Q Consensus 147 RGR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~--lAV~~aL~~~~~~~g~~~l~v~IKWPN--DIyv~gkKIgGI 222 (328)
-.|+|...+--||.|..=.++..... ....-.|+.. -++.++++++ |++ ..-+ |. -|+++++|||-|
T Consensus 69 ~~RGG~iTyHGPGQLV~YpIl~L~~~-~~~~~~yv~~lE~~vi~~l~~~----gi~---~~~~-~~~~GVWv~~~KIaaI 139 (213)
T PRK14342 69 SDRGGQVTYHGPGQLVMYVLLDLKRL-KLGVRQLVTAIEQTVINTLAEY----GIE---AHAK-PDAPGVYVDGKKIASL 139 (213)
T ss_pred ecCCCceEEECCCeEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHHc----CCc---eeec-CCCCcCcccCCEEEEE
Confidence 36889988888998766666655421 1222233322 3455555543 432 2221 22 577788999988
Q ss_pred eceeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 020263 223 LCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYD 284 (328)
Q Consensus 223 LvE~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~ 284 (328)
=+-... ..-.=|+.|||+++. ..||+.+. +..++.+++...+.++|.+.|.
T Consensus 140 Gv~v~r----~vT~HG~AlNv~~dL~~F~~IvPCGl~~~~vTSl~~~-------~~~~~~~~v~~~~~~~f~~~f~ 204 (213)
T PRK14342 140 GLRIRR----GCSFHGLALNVNMDLSPFLRINPCGYAGLEMTQLSDL-------GGPATVDEVAPRLLAELLALLG 204 (213)
T ss_pred EEeEec----ceeecceeEecCCCchhhCcEecCCCCCCcEeeHHHh-------CCCCCHHHHHHHHHHHHHHHhC
Confidence 666431 112369999999741 23555431 4578899999999999988763
No 15
>TIGR00214 lipB lipoate-protein ligase B. Involved in lipoate biosynthesis as the main determinant of the lipoyl-protein ligase activity required for lipoylation of enzymes such as alpha-ketoacid dehydrogenases. Involved in activation and re-activation (following denaturation) of lipoyl-protein ligases (calcium ion-dependant process).
Probab=93.23 E-value=2.3 Score=38.70 Aligned_cols=116 Identities=14% Similarity=0.139 Sum_probs=72.0
Q ss_pred cCCCCceecCCCCceeeeeeecCCCCCcchHHHHHH--HHHHHHHHHhhhcCCCCCCCceeeecC--ceeecCeEEeEee
Q 020263 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVAS--LALTEAINYVCSRDGLPCLDIKIKWPN--DLYLNGIKVGGIL 223 (328)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~--lAV~~aL~~~~~~~g~~~l~v~IKWPN--DIyv~gkKIgGIL 223 (328)
.|+|...+--||.|..=.++..... ....-.|+-. -++.++++++ |++ .. .-|. -||++++|||-|=
T Consensus 50 ~RGG~iTyHGPGQLV~YpIl~L~~~-~~~v~~yv~~lE~~~I~~l~~~----gi~---a~-~~~~~~GVWv~~~KIasIG 120 (184)
T TIGR00214 50 ERGGQVTYHGPGQQVMYVILDLKRF-QLDVRWLVTQLEQTVIITLAEL----GIE---GE-PIADATGVWVEGKKVASLG 120 (184)
T ss_pred CCCCeeEEECCCeEEEEEEEEchhc-CCCHHHHHHHHHHHHHHHHHHc----CCc---eE-EcCCCCeEEecCCEEEEEE
Confidence 5788888888998777677765422 2333334433 3566666654 432 21 1233 4678899999886
Q ss_pred ceeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 020263 224 CTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFY 283 (328)
Q Consensus 224 vE~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~ 283 (328)
+-... ..-.=|+.|||+++. ..||+.+. +..++.+++...+.++|.+.|
T Consensus 121 v~v~r----~vt~HG~ALNv~~dL~~F~~I~PCGl~~~~vTSl~~~-------~~~~~~~~v~~~~~~~f~~~f 183 (184)
T TIGR00214 121 IRVRR----GCTFHGLALNINMDLSPFSHINPCGYAGREMGSLNQF-------LPGATVENVAPLLIKAFAELL 183 (184)
T ss_pred EEEec----cEeecceEEEcCCCchHhccEEcCCCCCCcEeeHHHH-------cCCCCHHHHHHHHHHHHHHHh
Confidence 65431 112359999998751 13555432 356788999999999988765
No 16
>TIGR00545 lipoyltrans lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus.
Probab=92.30 E-value=0.38 Score=47.16 Aligned_cols=64 Identities=22% Similarity=0.301 Sum_probs=41.6
Q ss_pred CCCceecCCCCceeeeeeecCCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEe
Q 020263 150 SKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGI 222 (328)
Q Consensus 150 ~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGI 222 (328)
+|..=+-..|++.||++.+.+.. ..... -...-.+.++|+++ | +++.+.=+|||.++||||+|.
T Consensus 73 GGGaVyhD~g~l~~s~i~~~~~~-~~~~~-~~~~~~i~~aL~~l----G---i~a~~~~rnDl~v~gkKisGs 136 (324)
T TIGR00545 73 GGGAVFHDLGNICFSFITPKDGK-EFENA-KIFTRNVIKALNSL----G---VEAELSGRNDLVVDGRKISGS 136 (324)
T ss_pred CCceEEEcCCceEEEEEEcCCcc-chhhH-HHHHHHHHHHHHHh----C---CCeEECCCceEEECCEEEEEE
Confidence 34444445689999998865311 11111 22334567777665 4 556666799999999999997
No 17
>PRK14344 lipoate-protein ligase B; Provisional
Probab=91.68 E-value=4.1 Score=38.17 Aligned_cols=119 Identities=13% Similarity=0.128 Sum_probs=71.8
Q ss_pred ccCCCCceecCCCCceeeeeeecCCCCCcchHHHHHH--HHHHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeec
Q 020263 147 RGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVAS--LALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILC 224 (328)
Q Consensus 147 RGR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~--lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILv 224 (328)
-.|+|...+--||.|..=.++..... ....-.|+.. -++.+++++ +|++. .+.+=---||++++|||.|=+
T Consensus 87 ~~RGG~iTyHGPGQLV~YpIl~L~~~-~~~v~~yv~~lE~~ii~~l~~----~gi~~--~~~~~~~GVWv~~~KIaaIGv 159 (223)
T PRK14344 87 IDRGGEVTHHMPGQLVTYLVLDLRRF-NKDLNWYLRQLEQVLIDVLAD----LGIDG--ERLDGLTGVWIGNKKVASIGI 159 (223)
T ss_pred cCCCceeeEECCCcEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHH----cCCce--eecCCCCcEEcCCCeEEEEeE
Confidence 46888888888998777677765422 1222223322 344455554 34321 112112356788899998866
Q ss_pred eeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 020263 225 TSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFY 283 (328)
Q Consensus 225 E~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~ 283 (328)
-... ..-.=|+.|||+++. ..||+.+. +..++.+++...++++|.+.|
T Consensus 160 ~v~r----~vT~HG~ALNv~~dL~~F~~IvPCGl~~~~vTSl~~~-------~~~~~~~~v~~~l~~~f~~~f 221 (223)
T PRK14344 160 GCRR----WITQHGFSLNVDCDLEGFNKIVPCGLEGCQVGRLSDW-------IPGLNIKEVKPLLKKSLQERF 221 (223)
T ss_pred eEec----ceeecceEEecCCCccccCcEEcCCCCCCcEeeHHHH-------cCCCCHHHHHHHHHHHHHHHh
Confidence 6431 112369999999741 13555432 357889999999999988765
No 18
>PRK14345 lipoate-protein ligase B; Provisional
Probab=90.96 E-value=5.2 Score=37.71 Aligned_cols=119 Identities=18% Similarity=0.149 Sum_probs=72.0
Q ss_pred cCCCCceecCCCCceeeeeeecCCCCCcchHHHHHH--HHHHHHHHHhhhcCCCCCCCceeeecCceeec------CeEE
Q 020263 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVAS--LALTEAINYVCSRDGLPCLDIKIKWPNDLYLN------GIKV 219 (328)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~--lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~------gkKI 219 (328)
.|+|-..+--||.|..=.++..... ...-.|+.. -++.++++++ |++. .+.+=.--||++ ++||
T Consensus 76 dRGG~iTyHGPGQLV~YpIldL~~~--~~v~~yv~~LE~~vI~~l~~~----gi~a--~~~~~~~GVWv~~~~~~~~~KI 147 (234)
T PRK14345 76 DRGGKITWHGPGQLVGYPIIKLAEP--LDVVDYVRRLEEALIAVCADL----GLNA--GRVDGRSGVWVPADGGRPDRKI 147 (234)
T ss_pred cCCCceeEeCCCeEEEEEEEecCCC--CCHHHHHHHHHHHHHHHHHHc----CCce--eecCCCCeEEECCCCCCCcceE
Confidence 6888888888998766666665431 223333333 3555666654 4321 112211246665 6999
Q ss_pred eEeeceeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 020263 220 GGILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYD 284 (328)
Q Consensus 220 gGILvE~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~ 284 (328)
|-|=+-... ..-.=|+.|||+++. ..||+.+. .+..++.+++...+.++|.+.|.
T Consensus 148 aaIGv~v~r----~vT~HG~ALNV~~DL~~F~~IvPCGl~~~~vTSl~~~------~g~~~~~~~v~~~l~~~f~~~f~ 216 (234)
T PRK14345 148 AAIGIRVSR----GVTMHGFALNCDNDLAAFDAIVPCGISDAGVTTLSAE------LGRTVTVAEVVDPVAAALCDALD 216 (234)
T ss_pred EEEEeeecc----ceeecceEEEeCCChHHhceEEeCCCCCCcEEehhHh------hCCCCCHHHHHHHHHHHHHHHhC
Confidence 988665431 112469999999741 23555432 24577889999999999887764
No 19
>PRK14343 lipoate-protein ligase B; Provisional
Probab=90.38 E-value=5.6 Score=37.57 Aligned_cols=120 Identities=13% Similarity=0.116 Sum_probs=72.5
Q ss_pred cCCCCceecCCCCceeeeeeecCCCCCcchHHHHHH--HHHHHHHHHhhhcCCCCCCCceeeecCceeec-----CeEEe
Q 020263 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVAS--LALTEAINYVCSRDGLPCLDIKIKWPNDLYLN-----GIKVG 220 (328)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~--lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~-----gkKIg 220 (328)
.|+|...+--||.|..=.++..... ....-.|+-. -++.++++++ |++. .+.+=.--||++ ++|||
T Consensus 80 dRGG~iTyHGPGQLV~YpIl~L~~~-~~~v~~yv~~lE~~vI~~l~~~----gi~~--~~~~~~~GVwv~~~~~~~~KIa 152 (235)
T PRK14343 80 DRGGQITYHGPGQVVAYLLLDLRRR-KLMVRELVTRIEQAVIDTLAAY----NLAS--ERKAGAPGIYVASGPHQGAKIA 152 (235)
T ss_pred CCCCceeEeCCCeEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHHc----CCce--eecCCCCeEEEeCCCCCCCeEE
Confidence 7889988888998766666665421 1222233322 3556666654 4321 111212356676 89999
Q ss_pred EeeceeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 020263 221 GILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDT 285 (328)
Q Consensus 221 GILvE~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~~ 285 (328)
-|=+-... ..-.=|+.|||+++. ..||+.+ .+..++.+++...++++|.+.|..
T Consensus 153 aIGv~v~r----~vT~HG~ALNv~~DL~~F~~I~PCGl~~~~vTSL~~-------lg~~~~~~~v~~~l~~~f~~~f~~ 220 (235)
T PRK14343 153 ALGLKIRN----GCSYHGLSLNVKMDLRPFLAINPCGYAGLETVDMAS-------LGVAADWADVAQTLARRLIANLDG 220 (235)
T ss_pred EEeeeeec----ceeecccEEEeCCCchhhCcEECCCCCCCcEeeHHH-------hCCCCCHHHHHHHHHHHHHHHhCc
Confidence 88665431 112359999998741 1355532 256788999999999999887744
No 20
>PRK14349 lipoate-protein ligase B; Provisional
Probab=89.15 E-value=9.3 Score=35.78 Aligned_cols=120 Identities=13% Similarity=0.077 Sum_probs=71.7
Q ss_pred cCCCCceecCCCCceeeeeeecCCCCCcchHHHHHH--HHHHHHHHHhhhcCCCCCCCceeeecCceeec-----CeEEe
Q 020263 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVAS--LALTEAINYVCSRDGLPCLDIKIKWPNDLYLN-----GIKVG 220 (328)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~--lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~-----gkKIg 220 (328)
.|+|...+--||.|..=.++..... ....-.|+.. -++.++++++ |++. ..+.+=---||++ ++|||
T Consensus 65 ~RGG~iTyHGPGQLV~YpIldL~~~-~~~vr~yv~~LE~~~I~~l~~~----gi~~-a~~~~~~~GVWv~~~~~~~~KIa 138 (220)
T PRK14349 65 DRGGQVTYHGPGQVLAYTLFDLRRA-GLYVREYVDMLEQATLATLREL----GLEQ-ACRKPGAPGIYVPQPGGELAKIA 138 (220)
T ss_pred cCCcceEEeCCCcEEEEEEEEcccC-CCCHHHHHHHHHHHHHHHHHHh----CCcc-eeecCCCCcEEeCCCCCCCceEE
Confidence 6888888888998776667765422 1222333333 3555666664 3320 0111111135665 48999
Q ss_pred EeeceeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 020263 221 GILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYD 284 (328)
Q Consensus 221 GILvE~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~ 284 (328)
.|=+-... ..-.=|+.|||+++. ..||+.+ .+..++.+++...+.++|.+.|.
T Consensus 139 aiGv~v~r----~vT~HG~ALNv~~DL~~F~~IvPCGl~~~~vTSl~~-------~g~~~~~~~v~~~l~~~f~~~f~ 205 (220)
T PRK14349 139 ALGVKVRN----GYAYHGLALNIDMDLSPFLGINPCGYEGLRTVDLAA-------CGVRTSVERAGELLAAQLARAHG 205 (220)
T ss_pred EEeeEEec----ceeecceeEEecCCchhhCcEEcCCCCCCcEeeHHH-------hCCCCCHHHHHHHHHHHHHHHhC
Confidence 87666431 112369999999741 1355532 25678999999999999988773
No 21
>COG0095 LplA Lipoate-protein ligase A [Coenzyme metabolism]
Probab=88.50 E-value=1.2 Score=41.79 Aligned_cols=134 Identities=17% Similarity=0.227 Sum_probs=74.7
Q ss_pred CceEEEeCcccccccCCCCceecCCCCceeeeeeecCCCC-CcchHHHHHHHHHHHHHHHhhhcCCCCCCC-ceeeecCc
Q 020263 134 VGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDGR-VVPLLQYVASLALTEAINYVCSRDGLPCLD-IKIKWPND 211 (328)
Q Consensus 134 ~g~vviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~~~-~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~-v~IKWPND 211 (328)
+| +-+..+.|.|.. =+-..|++.||++.+-+... ....+.-...-.+.++++.+ | ++ ....=.||
T Consensus 64 ~~-i~vvRR~sGGGa-----V~hd~g~l~~S~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l----g---v~~~~~~~~nD 130 (248)
T COG0095 64 DG-IPVVRRPSGGGA-----VFHDLGNLNYSVITPDEGGLESYETLYKFLLQPVIDALRAL----G---VEGAECPGRND 130 (248)
T ss_pred cC-CcEEEEcCCCce-----EEecCCcEEEEEEECCCCccccHHHHHHHHHHHHHHHHHHc----C---CCeeccCCCcc
Confidence 45 667888887754 33446699999998754321 12222223455666777665 3 34 56667899
Q ss_pred eeecCeEEeEeeceeeccCC---cceEEEEEeecCCC-----CCC--------cchHHHHHHhhhcCCCCCCHHHHHHHH
Q 020263 212 LYLNGIKVGGILCTSTYRTK---KFNVSIGIGLNVNN-----EEP--------TTCLNAVLRKLSDSTYQFRREDVIAAF 275 (328)
Q Consensus 212 Iyv~gkKIgGILvE~~~~~~---~~~vVIGIGINvn~-----~~p--------~t~L~~~i~~l~~~~~~l~re~Lla~i 275 (328)
|.++||||+|+=--.. .+. +..+.. -+++.. ..| ..+..+....+.+. ..++.++++..+
T Consensus 131 l~v~gkKisG~Aq~~~-~~~~l~hgtll~--~~d~~~l~~~l~~~~~k~~~k~~~s~~~rv~~l~~~-~~~~~~e~~~~l 206 (248)
T COG0095 131 LVVDGKKISGSAQRRT-KGRILHHGTLLL--DIDLELLARVLRVPKEKIKSKGIKSVRERVANLEEL-LKISVEEFLEAL 206 (248)
T ss_pred eeEcCcEEeeHHHHhh-CCcEEEEEEEEE--eCCHHHHHHHhCCChhhhhhcccccHHHhCcchhhc-cCCCHHHHHHHH
Confidence 9999999999732211 111 111222 112110 011 11222221111112 458899999999
Q ss_pred HHHHHHHHH
Q 020263 276 FNKFETFYD 284 (328)
Q Consensus 276 l~~fe~~~~ 284 (328)
++.|.+.+.
T Consensus 207 ~~~f~~~~~ 215 (248)
T COG0095 207 LEAFFKVLG 215 (248)
T ss_pred HHHHHHhhC
Confidence 999998874
No 22
>PRK14341 lipoate-protein ligase B; Provisional
Probab=88.46 E-value=11 Score=35.14 Aligned_cols=116 Identities=16% Similarity=0.175 Sum_probs=66.4
Q ss_pred cCCCCceecCCCCceeeeeeecCCCCCcchHHHHH--HHHHHHHHHHhhhcCCCCCCCceeeecC--ceeecC-------
Q 020263 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVA--SLALTEAINYVCSRDGLPCLDIKIKWPN--DLYLNG------- 216 (328)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~--~lAV~~aL~~~~~~~g~~~l~v~IKWPN--DIyv~g------- 216 (328)
.|+|..=+--||.|..=.++..... ....-.|+- --++.+.++++ |+ +.. .-|+ .||+++
T Consensus 70 ~RGG~iTyHGPGQlV~YpIl~L~~~-~~~v~~yv~~lE~~iI~~l~~~----gi---~~~-~~~~~~GVWv~~~~~~~~~ 140 (213)
T PRK14341 70 GRGGQYTYHGPGQRVAYVMLDLKRR-RRDVRAFVAALEEWIIATLAAF----NI---RGE-RREDRVGVWVRRPDKGSGA 140 (213)
T ss_pred CCCcceeEECCCeEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHHh----CC---ceE-EcCCCCeEEecCccCCCCC
Confidence 3556644445777655556654321 122222222 23444555543 53 222 2244 678873
Q ss_pred -eEEeEeeceeeccCCcceEEEEEeecCCCC--------------CCcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 020263 217 -IKVGGILCTSTYRTKKFNVSIGIGLNVNNE--------------EPTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFET 281 (328)
Q Consensus 217 -kKIgGILvE~~~~~~~~~vVIGIGINvn~~--------------~p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~ 281 (328)
+|||-|=+-... ..-.=|+.|||+++ ...||+.+ .+..++.+++...++++|++
T Consensus 141 ~~KIaaIGv~v~r----~vT~HG~ALNv~~dL~~F~~IvPCGl~~~~vTSl~~-------~g~~~~~~~v~~~l~~~f~~ 209 (213)
T PRK14341 141 EDKIAAIGVRLRR----WVSFHGISINVEPDLSHFSGIVPCGISEHGVTSLVD-------LGLPVTMDDVDAALKKAFEK 209 (213)
T ss_pred CCcEEEEeeeEec----ceeccceEEEecCChhhhCcEecCCCCCCcEeeHHH-------hCCCCCHHHHHHHHHHHHHH
Confidence 799988665431 11235999999874 12456643 15678899999999999987
Q ss_pred HH
Q 020263 282 FY 283 (328)
Q Consensus 282 ~~ 283 (328)
.|
T Consensus 210 ~f 211 (213)
T PRK14341 210 VF 211 (213)
T ss_pred Hh
Confidence 65
No 23
>PRK03822 lplA lipoate-protein ligase A; Provisional
Probab=87.38 E-value=8.3 Score=38.15 Aligned_cols=126 Identities=17% Similarity=0.205 Sum_probs=67.6
Q ss_pred EeCcccccccCCCCceecCCCCceeeeeeecCCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceeec---
Q 020263 139 VADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLN--- 215 (328)
Q Consensus 139 iA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~--- 215 (328)
++++.|.| +.=+-..|++.||++.+.+.. .. . ...-.|.+||+++ | +++.+.=.|||.++
T Consensus 68 vvRR~SGG-----GAVyhD~Gnl~~s~i~~~~~~---~~-~-~~~~~ii~aL~~l----G---i~a~~~~rnDi~v~~~~ 130 (338)
T PRK03822 68 LARRSSGG-----GAVFHDLGNTCFTFMAGKPEY---DK-T-ISTSIVLNALNSL----G---VSAEASGRNDLVVKTAE 130 (338)
T ss_pred EEEECCCC-----ceEEEcCCCcEEEEEeCCCcc---CH-H-HHHHHHHHHHHHc----C---CceeECCCccEEEecCC
Confidence 44555544 433444589999998753221 11 1 1234677888775 4 57778889999995
Q ss_pred -CeEEeEeeceeeccCCc---ceEEEEEeecCCC-----CCC--------cchHHHHHHhhhcCCCCCCHHHHHHHHHHH
Q 020263 216 -GIKVGGILCTSTYRTKK---FNVSIGIGLNVNN-----EEP--------TTCLNAVLRKLSDSTYQFRREDVIAAFFNK 278 (328)
Q Consensus 216 -gkKIgGILvE~~~~~~~---~~vVIGIGINvn~-----~~p--------~t~L~~~i~~l~~~~~~l~re~Lla~il~~ 278 (328)
|+||+|-= .....+.. ..+.+ -.|+.. ..+ ..+....+..+.+..+.++.+++...+++.
T Consensus 131 g~kKisGsA-q~~~~~~~l~HGTlL~--~~d~~~l~~~L~~~~~k~~skgv~Sv~srVtnl~~~~~~~~~e~~~~~l~~~ 207 (338)
T PRK03822 131 GDRKVSGSA-YRETKDRGFHHGTLLL--NADLSRLANYLNPDKKKLQAKGITSVRSRVTNLTELLPGITHEQVCEAITEA 207 (338)
T ss_pred CCcEEEEEe-eeeeCCeEEEEEEEEe--cCCHHHHHHHhCCChhhhhhccccchHhhhccHHHhCCCCCHHHHHHHHHHH
Confidence 69999931 11111110 11222 122211 011 112222222222212358899999999999
Q ss_pred HHHHHH
Q 020263 279 FETFYD 284 (328)
Q Consensus 279 fe~~~~ 284 (328)
|.+.|.
T Consensus 208 f~~~~~ 213 (338)
T PRK03822 208 FFAHYG 213 (338)
T ss_pred HHHHhC
Confidence 988763
No 24
>COG0321 LipB Lipoate-protein ligase B [Coenzyme metabolism]
Probab=87.07 E-value=15 Score=34.38 Aligned_cols=120 Identities=17% Similarity=0.175 Sum_probs=68.4
Q ss_pred cCCCCceecCCCCceeeeeeecCCCCCcchHHHHHHH--HHHHHHHHhhhcCCCCCCCceeeecCceeecC-eEEeEeec
Q 020263 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVASL--ALTEAINYVCSRDGLPCLDIKIKWPNDLYLNG-IKVGGILC 224 (328)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~l--AV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~g-kKIgGILv 224 (328)
+|+|..=+--||.+-.=.++..... +...-.|+.++ ||.++|+++ |+. .-+.+==--||+++ +|||.|=+
T Consensus 76 ~RGGqvTyHGPGQ~V~Y~ildLkr~-~~~vr~~V~~LEqavI~tLa~~----~i~--~~~~~~~~GVwV~~~~KIAaiGi 148 (221)
T COG0321 76 DRGGQVTYHGPGQLVAYPILDLKRP-KLDVREYVRALEQAVINTLAEY----GIE--AERRPDRPGVWVEEERKIAAIGI 148 (221)
T ss_pred cCCceeEEeCCCcEEEEEEEecccc-cccHHHHHHHHHHHHHHHHHHc----CCc--ccccCCCCeEEecCCceEEEEEE
Confidence 4666644445676554455544322 12233444443 777777765 331 11111112367775 99997765
Q ss_pred eeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 020263 225 TSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDT 285 (328)
Q Consensus 225 E~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~~ 285 (328)
-... ..-.=|+.|||+++. +.+++.+. +..++-+++-..+.++|.+.+..
T Consensus 149 rirr----~vs~HGlALNv~~DL~~F~~I~PCG~~~~~~tsl~d~-------~~~v~~~~V~~~l~~~~~~~l~~ 212 (221)
T COG0321 149 RIRR----GVTFHGLALNVNMDLSPFNRIVPCGYAGMEVTSLSDL-------GPPVTVDEVAKALVAAFAKLLGP 212 (221)
T ss_pred EEec----ccceeeeEEeccCCchhccceeccccCCCceeEHHHh-------CCCCcHHHHHHHHHHHHHHHhCC
Confidence 5431 112359999999751 23444432 44588899999999999887754
No 25
>PRK14346 lipoate-protein ligase B; Provisional
Probab=76.73 E-value=55 Score=30.90 Aligned_cols=60 Identities=13% Similarity=0.123 Sum_probs=39.9
Q ss_pred eecCeEEeEeeceeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHH
Q 020263 213 YLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNK 278 (328)
Q Consensus 213 yv~gkKIgGILvE~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~ 278 (328)
+.+++|||-|=+-... ..-.=|+.|||+++. ..||+.+ .+..++.+++...+.++
T Consensus 155 ~~~~~KIaAiGv~v~r----~vT~HG~ALNv~~DL~~F~~IvPCGl~~~~vTSL~~-------lg~~~~~~~v~~~l~~~ 223 (230)
T PRK14346 155 FRGLGKIAALGIKVSR----HCTYHGVALNVAMDLEPFSRINPCGYAGLQTVDLST-------IGVQTTWDEAASVLGQQ 223 (230)
T ss_pred ccccceEEEEeeEEec----ceeecceeEEcCCChhhhCcEECCCCCCCceeeHHH-------hCCCCCHHHHHHHHHHH
Confidence 3345799987665431 112469999999741 2355532 25678899999999988
Q ss_pred HHHHH
Q 020263 279 FETFY 283 (328)
Q Consensus 279 fe~~~ 283 (328)
|.+.+
T Consensus 224 f~~~~ 228 (230)
T PRK14346 224 LARYL 228 (230)
T ss_pred HHHHh
Confidence 88765
No 26
>PRK14061 unknown domain/lipoate-protein ligase A fusion protein; Provisional
Probab=72.05 E-value=8.4 Score=40.77 Aligned_cols=123 Identities=19% Similarity=0.176 Sum_probs=65.5
Q ss_pred ccCCCCceecCCCCceeeeeeecCCCCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceee----cCeEEeEe
Q 020263 147 RGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYL----NGIKVGGI 222 (328)
Q Consensus 147 RGR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv----~gkKIgGI 222 (328)
|=-+|..=+-..|++.||++.+.+. ...- ...-.|.+||+++ | +++.+.=-|||.+ +||||+|-
T Consensus 295 R~SGGGAVYHD~GNlnfSfi~~~~~---~~~~--~~~~~Ii~aL~~L----G---I~ae~sgRNDI~v~~~~~GkKISGs 362 (562)
T PRK14061 295 RSSGGGAVFHDLGNTCFTFMAGKPE---YDKT--ISTSIVLNALNAL----G---VSAEASGRNDLVVKTAEGDRKVSGS 362 (562)
T ss_pred ECCCCcEEEEcCCceEEEEEeCCcc---cchH--HHHHHHHHHHHHc----C---CCeEECCCccEEEeeCCCCcEEEEE
Confidence 3334555555678899999875221 1111 1124567788765 4 5677887899999 69999993
Q ss_pred eceeeccCCcceEEEEEeecCCCC-------CCc--------chHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 020263 223 LCTSTYRTKKFNVSIGIGLNVNNE-------EPT--------TCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFY 283 (328)
Q Consensus 223 LvE~~~~~~~~~vVIGIGINvn~~-------~p~--------t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~ 283 (328)
= ... ..+....--=+=+|++.+ .|. .+.+..+..+.+..+.++.+++...+++.|.+.|
T Consensus 363 A-q~~-~~~~~lhHGTLL~d~dl~~L~~~L~~~~~Kl~sKgvkSVrsRVtNL~e~l~~it~e~f~~~L~~~f~~~~ 436 (562)
T PRK14061 363 A-YRE-TKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGIPHEQVCEAITEAFFAHY 436 (562)
T ss_pred e-EEE-eCCeEEEEEEEEecCCHHHHHHHhCCCchhhhhhhhhhHHhhceeHHHhCCCCCHHHHHHHHHHHHHHHc
Confidence 1 111 111110000011233221 111 1222221112111224789999999999998776
No 27
>PRK14347 lipoate-protein ligase B; Provisional
Probab=71.08 E-value=89 Score=29.04 Aligned_cols=119 Identities=15% Similarity=0.192 Sum_probs=65.0
Q ss_pred cCCCCceecCCCCceeeeeeecCCCC-CcchHHHHHH--HHHHHHHHHhhhcCCCCCCCceeeecCceeec-----CeEE
Q 020263 148 GRSKNAWESPKGCLMFSFTIQMEDGR-VVPLLQYVAS--LALTEAINYVCSRDGLPCLDIKIKWPNDLYLN-----GIKV 219 (328)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~-~l~~ls~~~~--lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~-----gkKI 219 (328)
.|+|..=+--||.|..=.++...... ....-.|+-. -++.++++++ |++. .+.+=---||++ ++||
T Consensus 68 ~RGG~vTyHGPGQlV~YpIldL~~~~~~~~v~~yv~~lE~~ii~~l~~~----gi~~--~~~~~~~GVWv~~~~~~~~KI 141 (209)
T PRK14347 68 GRGGKFTFHGPGQRVIYPILNLASPNRHKDLKLYIKMLEEWIINSLNYF----GIKA--YIIKDKVGIWVKVRKDEFAKI 141 (209)
T ss_pred cCCcceEEeCCCcEEEEEEEeccccccCCCHHHHHHHHHHHHHHHHHHc----CCce--EEcCCCCEEEEcCCCCCCceE
Confidence 46666445557776655566553211 1122233333 3555666554 4311 111101123443 6899
Q ss_pred eEeeceeeccCCcceEEEEEeecCCCCC--------------CcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 020263 220 GGILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFY 283 (328)
Q Consensus 220 gGILvE~~~~~~~~~vVIGIGINvn~~~--------------p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~ 283 (328)
|.|=+-... ..-.=|+.+||+++. ..||+.+ .+..++.+++...+.++|.+.|
T Consensus 142 aaiGv~v~r----~vT~HG~AlNv~~dL~~F~~IvPCGl~~~~vTSl~~-------~g~~~~~~~v~~~l~~~f~~~f 208 (209)
T PRK14347 142 AAIGVRVRK----WVTYHGVAINISTDLSKFSGIIPCGLENSLVTSLNQ-------LGIHVEMSEFDKIIQTEFNKIF 208 (209)
T ss_pred EEEeEEEec----ceeecceEEEeCCCccccCcEECCCCCCCcEeeHHH-------hCCCCCHHHHHHHHHHHHHHHh
Confidence 988666431 112369999998741 2356543 2567889999999999887754
No 28
>PF04017 DUF366: Domain of unknown function (DUF366); InterPro: IPR007162 This is an archaeal family of unknown function.; PDB: 2DDZ_E.
Probab=69.20 E-value=15 Score=33.37 Aligned_cols=74 Identities=24% Similarity=0.380 Sum_probs=40.3
Q ss_pred ceeeeeee-cCC--CCCcchHHHHHHHHHHHHHHHhhhcCCCCCCCceeeecCceeecCeEEeEeeceeeccCCcceEEE
Q 020263 161 LMFSFTIQ-MED--GRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSI 237 (328)
Q Consensus 161 L~fS~~l~-~~~--~~~l~~ls~~~~lAV~~aL~~~~~~~g~~~l~v~IKWPNDIyv~gkKIgGILvE~~~~~~~~~vVI 237 (328)
-+.-|++. ++. .......|-+...-+.+.|++. | +. ..+=-.|||++|+|+.=-....+. .-.-|
T Consensus 63 dmlhFIvEhFD~~dl~~~~~rQRLlv~i~kE~L~~~----g---v~-~~R~GDDLy~~~~KLSVSIAt~s~----vS~kI 130 (183)
T PF04017_consen 63 DMLHFIVEHFDSPDLKLAYLRQRLLVAIIKEVLEEY----G---VK-LRREGDDLYVNGRKLSVSIATASP----VSTKI 130 (183)
T ss_dssp EEEEEEEEE-S---HHHHHHHHHHHHHHHHHHHHTT----T------EEEETTEEEETTEE-EEEEEEEET----TEEEE
T ss_pred cceEEEEeeCCCCcHHHHHHHHHHHHHHHHHHHHhc----C---Cc-eeecccceeECCCEEEEEEEecCc----chheE
Confidence 45666663 322 1122344545555556666654 4 33 345689999999999754444332 23457
Q ss_pred EEeecCCCC
Q 020263 238 GIGLNVNNE 246 (328)
Q Consensus 238 GIGINvn~~ 246 (328)
=+||||...
T Consensus 131 H~GiNV~~~ 139 (183)
T PF04017_consen 131 HFGINVSSE 139 (183)
T ss_dssp EEEEESS-T
T ss_pred EEeEeeccc
Confidence 789999875
No 29
>COG2029 Uncharacterized conserved protein [Function unknown]
Probab=64.86 E-value=21 Score=32.19 Aligned_cols=71 Identities=21% Similarity=0.286 Sum_probs=40.4
Q ss_pred cCceeecCeEEeEeeceeeccCCcceEEEEEeecCCCC-CCcchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 020263 209 PNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNE-EPTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTFI 287 (328)
Q Consensus 209 PNDIyv~gkKIgGILvE~~~~~~~~~vVIGIGINvn~~-~p~t~L~~~i~~l~~~~~~l~re~Lla~il~~fe~~~~~~~ 287 (328)
-.|+|++|+|+.=-....+. ...-|=+||||... .|. +++. .+.+.+ ..+..++..++..++-+-++..+
T Consensus 109 GDDly~~grKLtVsIat~s~----vs~kiHlGiNV~t~g~p~--V~~i--gL~dlg-~~Di~~~m~~va~~yv~Eie~ie 179 (189)
T COG2029 109 GDDLYVEGRKLTVSIATVSP----VSSKIHLGINVKTEGVPD--VDAI--GLEDLG-YGDILEFMERVAVAYVREIEKIE 179 (189)
T ss_pred CCceeecCcEEEEEEEecCC----cceeEEEeEeeecccCCC--CCcc--cccccC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999998644433322 22346779999864 231 1111 111112 25677777777776666665554
Q ss_pred h
Q 020263 288 N 288 (328)
Q Consensus 288 ~ 288 (328)
.
T Consensus 180 ~ 180 (189)
T COG2029 180 K 180 (189)
T ss_pred H
Confidence 3
No 30
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown. It is found to the N terminus of the biotin protein ligase catalytic domain []. Biotin protein ligase carries out the post-translational modification of specific proteins by the attachment of biotin. It acts on various carboxylases such as acetyl-CoA-carboxylase, pyruvate carboxylase, propionyl CoA carboxylase, and 3-methylcrotonyl CoA carboxylase.
Probab=22.08 E-value=2e+02 Score=28.98 Aligned_cols=48 Identities=23% Similarity=0.112 Sum_probs=30.6
Q ss_pred hhhhhhhhccccccccccccccc--CCccceeeeecccc-hhHHHHHHhhh
Q 020263 20 PSIRSLVSANTKPFRLSASSAAM--DSNSSCMLVLSGKS-LAENEIAESLK 67 (328)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ 67 (328)
..-..+|.+.|.||.|+|+.... ..-+.+-+.|+... ..-.+++..++
T Consensus 242 ~~R~~fl~~~L~~lGL~vn~~~~~~~~P~LTpl~lss~~~~~v~~l~~~l~ 292 (367)
T PF09825_consen 242 KARLEFLKALLTKLGLKVNEDTSETTVPSLTPLHLSSLSPGKVSELLSSLK 292 (367)
T ss_pred HHHHHHHHHHHHHhCcccCCCccccCCCCccceEEEcCCcchHHHHHHHHH
Confidence 34567888999999999998765 22222445555443 34556777663
Done!