Query 020264
Match_columns 328
No_of_seqs 245 out of 1930
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:15:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dth_A Branched-chain amino ac 100.0 2.1E-73 7.3E-78 554.8 25.5 278 49-326 16-299 (372)
2 3dtg_A Branched-chain amino ac 100.0 7.7E-71 2.6E-75 537.7 25.9 284 43-326 10-299 (372)
3 3uzo_A Branched-chain-amino-ac 100.0 4.5E-70 1.5E-74 529.5 26.4 271 54-326 17-291 (358)
4 4dqn_A Putative branched-chain 100.0 2.9E-68 9.9E-73 514.8 30.3 267 59-326 7-276 (345)
5 2coi_A Branched chain aminotra 100.0 4.6E-68 1.6E-72 520.2 30.4 270 56-326 37-314 (386)
6 2a1h_A Branched chain aminotra 100.0 1.4E-65 4.9E-70 499.5 30.9 268 57-326 18-294 (365)
7 3u0g_A Putative branched-chain 100.0 8.3E-53 2.8E-57 404.3 24.9 235 81-326 26-266 (328)
8 1iye_A Branched-chain amino ac 100.0 3.6E-50 1.2E-54 382.2 26.6 231 85-326 9-245 (309)
9 2eiy_A ILVE, branched-chain am 100.0 5.5E-50 1.9E-54 380.9 27.4 230 85-326 8-243 (308)
10 3daa_A D-amino acid aminotrans 100.0 3E-48 1E-52 364.5 25.6 222 85-326 3-228 (277)
11 1i2k_A 4-amino-4-deoxychorisma 100.0 3.2E-47 1.1E-51 355.3 24.6 220 85-326 2-224 (269)
12 3lul_A 4-amino-4-deoxychorisma 100.0 7.7E-47 2.6E-51 353.9 26.5 217 85-326 6-225 (272)
13 2xpf_A 4-amino-4-deoxychorisma 100.0 1.7E-46 5.7E-51 354.9 22.6 219 85-326 24-245 (292)
14 3sno_A Hypothetical aminotrans 100.0 6.7E-46 2.3E-50 354.5 22.1 225 85-326 17-269 (315)
15 2zgi_A Putative 4-amino-4-deox 100.0 1.7E-42 5.9E-47 319.6 21.6 205 85-326 2-207 (246)
16 3csw_A BCAT, putative branched 100.0 2.6E-42 9E-47 325.2 17.6 208 86-326 18-227 (285)
17 3qqm_A MLR3007 protein; struct 100.0 4.7E-37 1.6E-41 279.5 18.9 185 107-326 13-198 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 1.5E-34 5E-39 257.4 18.1 172 107-326 2-177 (194)
No 1
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=2.1e-73 Score=554.84 Aligned_cols=278 Identities=38% Similarity=0.725 Sum_probs=261.6
Q ss_pred CCCCCCCCccCCCCCCCCCccccccCceEEEEeccc-eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEe
Q 020264 49 PSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127 (328)
Q Consensus 49 ~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~ 127 (328)
....+..+...++||++||||++|||||++++|+++ .|.||+++|++++.|+|.|++||||||||||||+|+++||+++
T Consensus 16 ~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~ 95 (372)
T 3dth_A 16 ANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIV 95 (372)
T ss_dssp CCSSCCCHHHHHHHHHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEE
T ss_pred ecCCCCCchhcccchhccCCCCccCCceEEEEEcCCCeEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEe
Confidence 333444445567899999999999999999999995 8999999999999999999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCcCCCC-CCceEEEEEEEEecCCcccccCCCCcEEEEEEe
Q 020264 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP-GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFAS 206 (328)
Q Consensus 128 lFrl~~Hl~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vP~~-~~~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~ 206 (328)
+|||++|++||++||++|+||.++.++|.++|+++++.|+.|||+. .++++||||+++++++.+|+.|+.+++++|+++
T Consensus 96 lFrl~~H~~RL~~Sa~~L~mp~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~~~~~~i~~~ 175 (372)
T 3dth_A 96 SFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIAS 175 (372)
T ss_dssp EESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCSEEEEEEEEE
T ss_pred ecCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCCCeEEEEEEe
Confidence 9999999999999999999997799999999999999999999987 457999999999988889999988899999999
Q ss_pred ecCccccCCcccEEEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEEC
Q 020264 207 PVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKG 286 (328)
Q Consensus 207 P~~~y~~~G~~~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~ 286 (328)
|+++||+.|++++++.++++|.|++|++++.+|+++||+++++++++|+++||||+||||+.++|+|+|++++|||++++
T Consensus 176 p~~~y~~~g~~~v~l~v~~~~~R~~p~g~~~~K~~gNY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~ 255 (372)
T 3dth_A 176 PAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFG 255 (372)
T ss_dssp EESCSSSCSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEES
T ss_pred eCchhhccCCccEEEEEccceeccCCCcccchhhHhhhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEEEC
Confidence 99999999999999999888999999999999998899999999999999999999999987789999999999999999
Q ss_pred C----EEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEEeeecc
Q 020264 287 N----IISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGT 326 (328)
Q Consensus 287 ~----~liTP~l~~~ILpGITR~svlela~~~G~~VeEr~i~~~ 326 (328)
+ +|+||+++++|||||||++||++|+++|++|+||+|+.+
T Consensus 256 ~~~g~~l~TP~l~~~iL~GITR~~vl~la~~~G~~v~Er~i~~~ 299 (372)
T 3dth_A 256 SGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVD 299 (372)
T ss_dssp CGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHH
T ss_pred CCCceEEEECCCCCCcCHHHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 8 999999999999999999999999999999999999864
No 2
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=7.7e-71 Score=537.68 Aligned_cols=284 Identities=37% Similarity=0.702 Sum_probs=259.7
Q ss_pred cccccCCCCCCCCCccCCCCCCCCCccccccCceEEEEecc-ceEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEe
Q 020264 43 LQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRK 121 (328)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~-~~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~ 121 (328)
+.+.+.+++.+.+....+--++|+|||++|||||++++|+. ++|.||+|+|+++++|||.+++||||||||||||+|++
T Consensus 10 ~~~~~~~~~~p~~~~~~~~~~~~~~fg~~~tdhm~~~~~~~~~gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~~ 89 (372)
T 3dtg_A 10 LEFTVSANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRW 89 (372)
T ss_dssp CCCEECCCSSCCCHHHHHHHHHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEEC
T ss_pred eEEEEeCCCCCCCcchhhhHhhccCCCCCccceeEEEEECCCCcEeCCEEEEchhceeCcchhhhhccceeeeeEEEEEC
Confidence 34444444433322222222689999999999999999985 48999999999999999999999999999999999999
Q ss_pred cCCeEeecChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCC-ceEEEEEEEEecCCcccccCCCCcE
Q 020264 122 EDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYT 200 (328)
Q Consensus 122 ~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vP~~~~-~~lyIRp~~~g~~~~lg~~p~~~~~ 200 (328)
+||++++|||++|++||++||++|+||.++.+.+.++++++++.+..|||+..+ .++||||+++++++.+|+.|+.++.
T Consensus 90 ~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP~~~~e~~~~~~~~l~~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~~~~ 169 (372)
T 3dtg_A 90 ADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYR 169 (372)
T ss_dssp TTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCSEEE
T ss_pred CCCeEEeeCchHHHHHHhhcccccCCCCCCHHHHHHHHHHHHHHhhhhccccCCCCceEEEEEEEeecCccCcCCCCCce
Confidence 999999999999999999999999999999999999999999999999998765 6999999999999999999999999
Q ss_pred EEEEEeecCccccCCcccEEEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCcee
Q 020264 201 FLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCN 280 (328)
Q Consensus 201 ~~i~~~P~~~y~~~G~~~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sN 280 (328)
++++++|+++|+..|.+++.+.+..++.|++|++++.+|.+|||+++++++.+|+++||||+||||..++|+|+|++++|
T Consensus 170 ~~ii~~p~~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~G~deal~Ld~~~~g~V~E~~~sN 249 (372)
T 3dtg_A 170 YLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMN 249 (372)
T ss_dssp EEEEEEEESCSSTTSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEE
T ss_pred eeeEecccccccccCcccceeecccceeecCcCCcchHHhcCCcchhhhHHHHHHhcCcchhhhhccccccceeecCceE
Confidence 99999999999999999988888888999999999999999999999999999999999999999987799999999999
Q ss_pred EEEE----ECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEEeeecc
Q 020264 281 IFIL----KGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGT 326 (328)
Q Consensus 281 if~v----~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr~i~~~ 326 (328)
||+| +||+|+||+++++|||||||++||+||+++|++|+||+|+++
T Consensus 250 iF~V~~~~kdg~liTPpl~~~iL~GITR~sVi~LA~~~Gi~V~Er~it~~ 299 (372)
T 3dtg_A 250 LFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVD 299 (372)
T ss_dssp EEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHH
T ss_pred EEEEEecCCCceEEeCCccccccccHHHHHHHHHHHHCCceEEEEeCCHH
Confidence 9999 577999999999999999999999999999999999999853
No 3
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=4.5e-70 Score=529.54 Aligned_cols=271 Identities=40% Similarity=0.697 Sum_probs=250.9
Q ss_pred CCCccCCCCCCCCCccccccCceEEEEeccceEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHH
Q 020264 54 DDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQ 133 (328)
Q Consensus 54 ~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~ 133 (328)
..++.+++||++|+||++|||||++++|++|.|.||+++|++++.|+++|++||||||||||||+|+++||++++|||++
T Consensus 17 ~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~ 96 (358)
T 3uzo_A 17 QAKKLADIDWSTLGFSYIRTDLRYLAHWKDGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQ 96 (358)
T ss_dssp -------CCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHH
T ss_pred ccccccCCCcccCCCCCcccCeeEEEEEeCCcEECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHH
Confidence 44566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCC-ceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccc
Q 020264 134 NAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF 212 (328)
Q Consensus 134 Hl~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vP~~~~-~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~ 212 (328)
|++||++||++|+||.++.++|.++|+++++.|+.|||+.+. +++||||+++++++.+|+.|+.++.++|++.|+++|+
T Consensus 97 Hl~RL~~Sa~~L~ip~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~~ 176 (358)
T 3uzo_A 97 NAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYF 176 (358)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCSS
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCCceEEEEEEEEecCCccccCCCCCeEEEEEEecChhhh
Confidence 999999999999999779999999999999999999998644 5899999999988889999888899999999999999
Q ss_pred cCCcccEEEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEE-CCE-EE
Q 020264 213 KEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK-GNI-IS 290 (328)
Q Consensus 213 ~~G~~~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~-~~~-li 290 (328)
+.|.+|+++.+++ +.|++|++++++|+++||+++++++++|+++||||+||+|..++|+|+|++++|||+++ ||+ |+
T Consensus 177 ~~g~~~v~l~~~~-~~R~~p~~~~~~K~~~NYl~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l~ 255 (358)
T 3uzo_A 177 KGGLTPTNFITSD-YDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKFV 255 (358)
T ss_dssp CSSSCCEEEECCS-CCSSCTTSSTTSCBHHHHHHHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEEE
T ss_pred hcCCccEEEEEEe-eeccCCCccccccchhhhHHHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEEE
Confidence 9899999999875 89999999999998679999999999999999999999998556999999999999995 788 99
Q ss_pred cCCCCCCCcchHHHHHHHHHHHH-CCCeEEEEeeecc
Q 020264 291 TPATSGTILAGITRKSIIEIASD-CGFQVRYPLLFGT 326 (328)
Q Consensus 291 TP~l~~~ILpGITR~svlela~~-~G~~VeEr~i~~~ 326 (328)
||+ +++|||||||++||++|++ +|++|+||+|+++
T Consensus 256 TP~-~~~iL~GItR~~vl~la~~~~g~~v~e~~i~~~ 291 (358)
T 3uzo_A 256 TPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRID 291 (358)
T ss_dssp EEC-CTTSCCCHHHHHHHHHHHHTTCCEEEEECCBTT
T ss_pred ECC-cCCcccCHHHHHHHHHHHhhcCCeEEEEECCHH
Confidence 999 8999999999999999999 9999999999865
No 4
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=2.9e-68 Score=514.75 Aligned_cols=267 Identities=43% Similarity=0.746 Sum_probs=252.6
Q ss_pred CCCCCCCCCccccccCceEEEEeccceEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHH
Q 020264 59 DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRL 138 (328)
Q Consensus 59 ~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL 138 (328)
+++||++|+||++|||||++++|++|.|.||+++|.+++.|++.|++||||||||||||+|+++||++++|+|++|++||
T Consensus 7 ~~~~~~~l~fg~~~td~m~~~~~~~~~w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL 86 (345)
T 4dqn_A 7 VDLDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERL 86 (345)
T ss_dssp CCCCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHH
T ss_pred CCCCchhcCCCCcccCceEEEEecCCcEECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCC-ceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccccCCcc
Q 020264 139 QTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLA 217 (328)
Q Consensus 139 ~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vP~~~~-~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~G~~ 217 (328)
++||++|+||.++.++|.++|+++++.|+.|||+.+. +++||||+++++++.+|+.|+.+++++|++.|+++|+..+.+
T Consensus 87 ~~Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~~~ 166 (345)
T 4dqn_A 87 QRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLA 166 (345)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTSCC
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccCCC
Confidence 9999999999779999999999999999999998644 589999999988888999888889999999999999887788
Q ss_pred cEEEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEE-ECCEEEcCCCCC
Q 020264 218 PLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFIL-KGNIISTPATSG 296 (328)
Q Consensus 218 ~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v-~~~~liTP~l~~ 296 (328)
++++.+++++.|++|++++++|+++||+++++++++|+++|+||+||+|..++|+|+|++++|||++ +||+|+||+ +.
T Consensus 167 gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~-~~ 245 (345)
T 4dqn_A 167 PTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPL-SP 245 (345)
T ss_dssp CEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECC-CT
T ss_pred CEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCC-CC
Confidence 9999998778999999999999966999999999999999999999999755699999999999998 899999999 89
Q ss_pred CCcchHHHHHHHHHHHH-CCCeEEEEeeecc
Q 020264 297 TILAGITRKSIIEIASD-CGFQVRYPLLFGT 326 (328)
Q Consensus 297 ~ILpGITR~svlela~~-~G~~VeEr~i~~~ 326 (328)
+|||||||++||++|++ +|++|+|++|+++
T Consensus 246 ~iL~GitR~~vl~la~~~~g~~v~e~~i~~~ 276 (345)
T 4dqn_A 246 SILPSVTKYSLLYLAEHRFGMKAIEGDVCVD 276 (345)
T ss_dssp TSCCCHHHHHHHHHHHHTTCCEEEECCCBTT
T ss_pred CccHHHHHHHHHHHHHhccCCeEEEEeCCHH
Confidence 99999999999999999 9999999999875
No 5
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=4.6e-68 Score=520.21 Aligned_cols=270 Identities=33% Similarity=0.571 Sum_probs=249.7
Q ss_pred CccCCCCCCCCCccccccCceEEEEeccc-eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHH
Q 020264 56 ESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQN 134 (328)
Q Consensus 56 ~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~H 134 (328)
.++.++||++|+||++|||||+.++|+++ +|.||+++|++++.|++.|++||||||||||||+|+++||++++|||++|
T Consensus 37 ~~~~~~~~~~~~fg~~~td~m~~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H 116 (386)
T 2coi_A 37 ILKEKPDPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLN 116 (386)
T ss_dssp SCCCCCCCC-CCTTCCCCSEEEEEEEETTTEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHH
T ss_pred CcccCCCccccCCccccccceEEEEeCCCcEEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHH
Confidence 34667899999999999999999999887 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccccC
Q 020264 135 AIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKE 214 (328)
Q Consensus 135 l~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~ 214 (328)
++||++||++|+||.++.++|.+++.++++.|+.|+|+..++++||||+++|+++.+|+.|+.+++++|+++|+++|+..
T Consensus 117 ~~RL~~Sa~~l~~p~~~~e~~~~~i~~lv~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~y~~~ 196 (386)
T 2coi_A 117 MDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSS 196 (386)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCSEEEEEEEEEEECCCC--
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEEECcccccc
Confidence 99999999999999779999999999999999999997656799999999988888999998899999999999999988
Q ss_pred C-cccEEEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEE---CC--E
Q 020264 215 G-LAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK---GN--I 288 (328)
Q Consensus 215 G-~~~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~---~~--~ 288 (328)
| .+++++.+++.+.|++|++++.+|+++||+++++++++|+++||||+||||. ++|+|+|++++|||+++ || +
T Consensus 197 ~~~~~v~l~~~~~~~r~~p~~~g~~K~~~Ny~~~~la~~eA~~~G~de~L~ld~-~~g~V~E~~~sNiF~v~~~~~g~~~ 275 (386)
T 2coi_A 197 GTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYG-EDHQITEVGTMNLFLYWINEDGEEE 275 (386)
T ss_dssp ---CCEEEEECTTCCSCCTTSSTTSCCTHHHHTTHHHHHHHHTTTCSEEEEEET-TTTEEEEETTEEEEEEEECTTSCEE
T ss_pred cccccEEEEEcccccccCCCcccccccccChHHHHHHHHHHHHcCCCEEEEEEC-CCCEEEEeCCceEEEEEEcCCCCEE
Confidence 7 7899999988788999999999999779999999999999999999999994 27999999999999996 88 9
Q ss_pred EEcCCCCCCCcchHHHHHHHHHHHH-CCCeEEEEeeecc
Q 020264 289 ISTPATSGTILAGITRKSIIEIASD-CGFQVRYPLLFGT 326 (328)
Q Consensus 289 liTP~l~~~ILpGITR~svlela~~-~G~~VeEr~i~~~ 326 (328)
|+||+++++|||||||++||++|++ +|++|+||+|+.+
T Consensus 276 l~TP~l~~~iL~GITR~~vl~la~~~~G~~V~Er~i~~~ 314 (386)
T 2coi_A 276 LATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMD 314 (386)
T ss_dssp EEECCCSSSSCCCHHHHHHHHHHHHHCSSEEEECCCBHH
T ss_pred EEECCCCCCccHHHHHHHHHHHHHhccCCcEEEEECCHH
Confidence 9999999999999999999999999 8999999999864
No 6
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=1.4e-65 Score=499.46 Aligned_cols=268 Identities=33% Similarity=0.586 Sum_probs=250.0
Q ss_pred ccCCCCC-CCCCccccccCceEEEEeccceEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHH
Q 020264 57 SADHMDW-DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNA 135 (328)
Q Consensus 57 ~~~~~~~-~~l~fg~~~td~m~~~~~~~~~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl 135 (328)
++.++|| ++|+||++|||||+.++|++..|.||+++|++++.|++.|++||||||||||||+|+++||++++|||++|+
T Consensus 18 ~~~~~~~~~~l~fg~~~~d~m~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl 97 (365)
T 2a1h_A 18 PHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNM 97 (365)
T ss_dssp CCCCCCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHH
T ss_pred ccCCCccccccCcCCccccceeeeecccCeEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHH
Confidence 3456788 999999999999999999887799999999999999999999999999999999999999998899999999
Q ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccccCC
Q 020264 136 IRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG 215 (328)
Q Consensus 136 ~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~G 215 (328)
+||++||++|+||.++.++|.++|.++++.|+.|+|+..+.++||||+++++++.+|+.|+.+++++|++.|+++|+..|
T Consensus 98 ~RL~~Sa~~l~~~~~~~~~l~~~i~~lv~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~g 177 (365)
T 2a1h_A 98 DRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGG 177 (365)
T ss_dssp HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCCCCcEEEEEEEECccccccc
Confidence 99999999999997799999999999999999999875556899999999888789999888899999999999999888
Q ss_pred -cccEEEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEE-cCCCCCeEEeeCceeEEEEE---CCE--
Q 020264 216 -LAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYL-DSVNKKNLEEVSSCNIFILK---GNI-- 288 (328)
Q Consensus 216 -~~~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~l-d~~~~g~V~E~s~sNif~v~---~~~-- 288 (328)
.+++++.+++.+.|++|++++++|+++||+++++++++|+++||||+||+ |. +|+|+|++++|||+++ ||+
T Consensus 178 ~~~~v~l~~~~~~~R~~~~~~~~~Kt~~ny~~~~la~~eA~~~G~de~L~l~d~--~G~V~E~~~sNif~v~~~~dg~~~ 255 (365)
T 2a1h_A 178 SVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP--DHQLTEVGTMNIFVYWTHEDGVLE 255 (365)
T ss_dssp SCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT--TTEEEEETTEEEEEEEECTTSCEE
T ss_pred cccceEEEEccccccCCCCccchhchhhccHHHHHHHHHHHHcCCCeEEEEECC--CCeEEEcCceEEEEEEecCCCcEE
Confidence 88999999877889999999999997799999999999999999999999 65 8999999999999996 675
Q ss_pred EEcCCCCCCCcchHHHHHHHHHHHHC-CCeEEEEeeecc
Q 020264 289 ISTPATSGTILAGITRKSIIEIASDC-GFQVRYPLLFGT 326 (328)
Q Consensus 289 liTP~l~~~ILpGITR~svlela~~~-G~~VeEr~i~~~ 326 (328)
|+||+++++|||||||++||++|+++ |++|+||+|+++
T Consensus 256 l~TP~l~~~iL~GITR~~vl~la~~~~G~~v~Er~i~~~ 294 (365)
T 2a1h_A 256 LVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMK 294 (365)
T ss_dssp EEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHH
T ss_pred EEeCCCCCCccccHHHHHHHHHHHhcCCCceEEEeCCHH
Confidence 99999999999999999999999995 999999999864
No 7
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=8.3e-53 Score=404.26 Aligned_cols=235 Identities=26% Similarity=0.401 Sum_probs=208.6
Q ss_pred eccc-eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCC-CHHHHHHH
Q 020264 81 CSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDA 158 (328)
Q Consensus 81 ~~~~-~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~-~~e~l~~~ 158 (328)
+.++ .|.||+++|.+++.|++.|++|+||||||||||+|+++||++++|++++|++||++||++|+||.+ +.++|.++
T Consensus 26 ~~~~~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~ 105 (328)
T 3u0g_A 26 DRDGKIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAA 105 (328)
T ss_dssp SCCSEEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHH
T ss_pred cCCCEEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Confidence 3455 799999999999999999999999999999999999888977799999999999999999999976 99999999
Q ss_pred HHHHHHHcCCcCCCCCCceEEEEEEEEecCCcccccCCC-CcEEEEEEeecCccccCC--cccEEEEeeccceecCCCC-
Q 020264 159 VKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYFKEG--LAPLNLYVEDEFHRATPGG- 234 (328)
Q Consensus 159 i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~~-~~~~~i~~~P~~~y~~~G--~~~v~l~v~~~~~R~~p~~- 234 (328)
++++++.|+. .++||||+++++.+.+|+.|+. +++++|.+.|+++|+..+ .+++++.++ ++.|..|++
T Consensus 106 i~~lv~~n~~-------~~~~iR~~vtrg~~~~g~~p~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~-~~~R~~~~~~ 177 (328)
T 3u0g_A 106 QRDVVRENKL-------ESCYLRPIIWIGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTS-SFTRHHVNVS 177 (328)
T ss_dssp HHHHHHHTTC-------SSEEEEEEEEECSSCCSTTCCCCCEEEEEEEEECC----HHHHHHCEEEEEC-SSCCCCTTTS
T ss_pred HHHHHHhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEEEcCCCCChhhhcCCEEEEEe-eeeecCCCCc
Confidence 9999999863 5789999987666678887753 578999999998876432 257888876 478999887
Q ss_pred CCCCcccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHC
Q 020264 235 AGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDC 314 (328)
Q Consensus 235 ~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~ 314 (328)
++++|+++||+++++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++. |||||||++||++|+++
T Consensus 178 ~~~~K~t~nyl~~vla~~eA~~~G~~e~l~ld~--~g~v~E~~~sNif~v~~g~l~TP~~~~-iL~GitR~~vl~~a~~~ 254 (328)
T 3u0g_A 178 MVRAKASGWYVNSILANQEATADGYDEALLLDV--DGYVSEGSGENFFLVNRGKLYTPDLAS-CLDGITRDTVITLAKEA 254 (328)
T ss_dssp CTTSCBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEECCSSS-SCCCHHHHHHHHHHHHT
T ss_pred ccchhhhhhhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceeEEEEECCEEEeCCccc-cchHHHHHHHHHHHHHc
Confidence 799996579999999999999999999999997 899999999999999999999999987 99999999999999999
Q ss_pred CCeEEEEeeecc
Q 020264 315 GFQVRYPLLFGT 326 (328)
Q Consensus 315 G~~VeEr~i~~~ 326 (328)
|++|+|++|+++
T Consensus 255 g~~v~e~~i~~~ 266 (328)
T 3u0g_A 255 GIEVIEKRITRD 266 (328)
T ss_dssp TCCEEECCCCHH
T ss_pred CCeEEEEeCCHH
Confidence 999999999864
No 8
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=3.6e-50 Score=382.21 Aligned_cols=231 Identities=29% Similarity=0.489 Sum_probs=207.8
Q ss_pred eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 020264 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (328)
Q Consensus 85 ~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (328)
.|.||+++|.+++.+++.|++|+||||||||||+|++.||+ ++|++++|++||++||++|+||.+ +.+++.+++.+++
T Consensus 9 ~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~ 87 (309)
T 1iye_A 9 IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVI 87 (309)
T ss_dssp EEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHH
T ss_pred EEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999877883 388999999999999999999965 9999999999999
Q ss_pred HHcCCcCCCCCCceEEEEEEEEecCCcccccCC--CCcEEEEEEeecCccccCC--cccEEEEeeccceecCCCC-CCCC
Q 020264 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKEG--LAPLNLYVEDEFHRATPGG-AGGV 238 (328)
Q Consensus 164 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~i~~~P~~~y~~~G--~~~v~l~v~~~~~R~~p~~-~~~~ 238 (328)
+.|.. +++|||+++.+++..+|+.|+ .+++++|.+.|+++|+..+ .+++++.+++ +.|..+++ .+.+
T Consensus 88 ~~~~~-------~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~ 159 (309)
T 1iye_A 88 RKNNL-------TSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSS-WNRAAPNTIPTAA 159 (309)
T ss_dssp HHTTC-------SSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEECS-SCCCCTTTSCTTS
T ss_pred HhcCC-------CCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEee-eeccCCCCCCccc
Confidence 98752 578999988876667888764 3688999999998876544 2578888764 78888876 4899
Q ss_pred cccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeE
Q 020264 239 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 318 (328)
Q Consensus 239 Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~V 318 (328)
|+++||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++.+|||||||++||++|+++|++|
T Consensus 160 K~~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v 237 (309)
T 1iye_A 160 KAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEV 237 (309)
T ss_dssp CBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCE
T ss_pred cchhhhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHcCCeE
Confidence 98779999999999999999999999997 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecc
Q 020264 319 RYPLLFGT 326 (328)
Q Consensus 319 eEr~i~~~ 326 (328)
+|++|+++
T Consensus 238 ~E~~i~~~ 245 (309)
T 1iye_A 238 REQVLSRE 245 (309)
T ss_dssp EECCCBTT
T ss_pred EEEeCCHH
Confidence 99999864
No 9
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=5.5e-50 Score=380.91 Aligned_cols=230 Identities=28% Similarity=0.388 Sum_probs=202.7
Q ss_pred eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 020264 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (328)
Q Consensus 85 ~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (328)
.|.||+++|.+++.+++.|++|+||||||||||+|++.+|. ++|++++|++||.+||++|+||.+ +.+++.+++.+++
T Consensus 8 ~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~ 86 (308)
T 2eiy_A 8 IWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEVV 86 (308)
T ss_dssp EEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSC-EEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred EEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcc-cccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999887776 699999999999999999999966 9999999999999
Q ss_pred HHcCCcCCCCCCceEEEEEEEEecCCcccccCC--CCcEEEEEEeecCccccCC--cccEEEEeeccceecCCCC-CCCC
Q 020264 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKEG--LAPLNLYVEDEFHRATPGG-AGGV 238 (328)
Q Consensus 164 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~i~~~P~~~y~~~G--~~~v~l~v~~~~~R~~p~~-~~~~ 238 (328)
+.+.. +++|||+++.+++..+|+.|. .+++++|.+.|+++|+..+ .+++++.+++ +.|..|++ ++++
T Consensus 87 ~~~~~-------~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~ 158 (308)
T 2eiy_A 87 RRNGY-------RSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSS-WARFPANVMPGKA 158 (308)
T ss_dssp HHTTC-------SSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECS-SCBCCTTTSCTTS
T ss_pred HhCCC-------CcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEec-ceecCCCCcCcce
Confidence 98752 478999998876667787765 5788999999998876543 3578888764 67888875 4899
Q ss_pred cccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeE
Q 020264 239 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 318 (328)
Q Consensus 239 Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~V 318 (328)
|+++||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++. |||||||++||++|+++|++|
T Consensus 159 Kt~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~~~~-iL~GitR~~ll~~a~~~g~~v 235 (308)
T 2eiy_A 159 KVGGNYVNSALAKMEAVAAGADEALLLDE--EGYVAEGSGENLFFVRDGVIYALEHSV-NLEGITRDSVIRIAKDLGYEV 235 (308)
T ss_dssp CBGGGHHHHHHHHHHHHHTTCSEEEEEBT--TSSEEEESSCEEEEEETTEEEEECCTT-SCCCHHHHHHHHHHHHTTCCE
T ss_pred ehhhhHHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCceEEEEEECCEEEeCCcCC-CCchHHHHHHHHHHHHCCCeE
Confidence 99977999999999999999999999997 899999999999999999999999988 999999999999999999999
Q ss_pred EEEeeecc
Q 020264 319 RYPLLFGT 326 (328)
Q Consensus 319 eEr~i~~~ 326 (328)
+|++|+++
T Consensus 236 ~E~~i~~~ 243 (308)
T 2eiy_A 236 QVVRATRD 243 (308)
T ss_dssp EEECCCHH
T ss_pred EEEeCCHH
Confidence 99999864
No 10
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=3e-48 Score=364.45 Aligned_cols=222 Identities=19% Similarity=0.322 Sum_probs=189.3
Q ss_pred eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 020264 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (328)
Q Consensus 85 ~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (328)
.|.||+++|.+++.|++.|++||||||||||||+| +|+ +|+|++|++||++||++|+||.+ +.++|.+++++++
T Consensus 3 ~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~---~g~--~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~li 77 (277)
T 3daa_A 3 TLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVY---NGE--MFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELV 77 (277)
T ss_dssp EEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred EEECCEEeEhHHCeechhhhHHhcccEEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 69999999999999999999999999999999998 565 89999999999999999999965 8999999999999
Q ss_pred HHcCCcCCCCCCceEEEEEEEEecCCccccc-C--CCCcEEEEEEeecCccccCCcccEEEEeeccceecCCCCCCCCcc
Q 020264 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLA-P--APEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKA 240 (328)
Q Consensus 164 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~-p--~~~~~~~i~~~P~~~y~~~G~~~v~l~v~~~~~R~~p~~~~~~Kt 240 (328)
+.|+. +++.+||++ .+|.++ .|.. | +.+++++|++.|++++.....+++++.+.++ .| +..+++|+
T Consensus 78 ~~n~~-----~~~~lri~v-trG~~~-r~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~-~r---~~~~~~Kt 146 (277)
T 3daa_A 78 EKNEL-----NTGHIYFQV-TRGTSP-RAHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVED-IR---WLRCDIKS 146 (277)
T ss_dssp HHHTC-----CSEEEEEEE-ESCBCS-CCSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEEC-CC---CSCTTSCB
T ss_pred HhcCC-----CcEEEEEEE-EecCCC-cCCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecC-cc---ccCCCcch
Confidence 99864 346677763 456654 3333 3 4568999999999854221113456666543 23 34679998
Q ss_pred cCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEE
Q 020264 241 ISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRY 320 (328)
Q Consensus 241 ~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeE 320 (328)
+ ||+++++++++|+++|+||+||+| +|+|+|++++|||+++||+|+||+++++|||||||++|+++|+++|++|+|
T Consensus 147 ~-nyl~~~la~~eA~~~g~~e~l~l~---~g~v~E~~~sNif~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~g~~v~e 222 (277)
T 3daa_A 147 L-NLLGAVLAKQEAHEKGCYEAILHR---NNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKE 222 (277)
T ss_dssp S-CCHHHHHHHHHHHHTTCSEEEEEE---TTEEEEETTBEEEEEETTEEEECCSSTTSCCCHHHHHHHHHHHHTTCCEEC
T ss_pred h-hhHHHHHHHHHHHHCCCCEEEEEc---CCEEEEcCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHHcCCeEEE
Confidence 5 999999999999999999999997 699999999999999999999999999999999999999999999999999
Q ss_pred Eeeecc
Q 020264 321 PLLFGT 326 (328)
Q Consensus 321 r~i~~~ 326 (328)
++|+++
T Consensus 223 ~~i~~~ 228 (277)
T 3daa_A 223 IPFTTH 228 (277)
T ss_dssp CCCBHH
T ss_pred EeCCHH
Confidence 999864
No 11
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=3.2e-47 Score=355.27 Aligned_cols=220 Identities=18% Similarity=0.225 Sum_probs=192.9
Q ss_pred eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 020264 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (328)
Q Consensus 85 ~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~ 164 (328)
.|.||+ ..+.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+||.++.+++.+++.++++
T Consensus 2 ~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~~~ 72 (269)
T 1i2k_A 2 FLINGH----KQESLAVSDRATQFGDGCFTTARVI---DGK--VSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAA 72 (269)
T ss_dssp EEETTE----EESCCCTTCHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCC----cCCccCccccccccceeEEEEEEEE---CCE--EecHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 588998 3578999999999999999999998 676 8999999999999999999998789999999999998
Q ss_pred HcCCcCCCCCCceEEEEEEEEecCCcccccCC--CCcEEEEEEeecCccccC-CcccEEEEeeccceecCCCCCCCCccc
Q 020264 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKE-GLAPLNLYVEDEFHRATPGGAGGVKAI 241 (328)
Q Consensus 165 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~i~~~P~~~y~~~-G~~~v~l~v~~~~~R~~p~~~~~~Kt~ 241 (328)
.+. +.|||+.+.++....|+.|+ .+++++|.+.|+++++.. ..+++++.+++ ++|..+..++.+|++
T Consensus 73 ~~~---------~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~~-~~~~~~~~~~~~Kt~ 142 (269)
T 1i2k_A 73 EQQ---------NGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSP-VRLGRNPHLAGIKHL 142 (269)
T ss_dssp HHC---------SEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEECS-CCBCCCTTTTBCCBS
T ss_pred hCC---------CeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEec-eecCCCCcccCcchh
Confidence 642 46899888766556777765 578899999999876521 13467787764 677666678999995
Q ss_pred CChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEE
Q 020264 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYP 321 (328)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr 321 (328)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++.+|||||||++||++|+++|++|+|+
T Consensus 143 -n~~~~~~a~~~A~~~G~de~l~ld~--~G~v~E~s~sNif~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~ 219 (269)
T 1i2k_A 143 -NRLEQVLIRSHLEQTNADEALVLDS--EGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEV 219 (269)
T ss_dssp -CCHHHHHHHHHHTTSSCSEEEEEBT--TSBEEECSSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEE
T ss_pred -hhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCccCccCCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred eeecc
Q 020264 322 LLFGT 326 (328)
Q Consensus 322 ~i~~~ 326 (328)
+|+++
T Consensus 220 ~i~~~ 224 (269)
T 1i2k_A 220 QASLE 224 (269)
T ss_dssp CCBHH
T ss_pred ECCHH
Confidence 99864
No 12
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=7.7e-47 Score=353.90 Aligned_cols=217 Identities=21% Similarity=0.265 Sum_probs=186.7
Q ss_pred eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 020264 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (328)
Q Consensus 85 ~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (328)
.|.|| .+++.|++.|++||||||||||||+| +|+ +|++++|++||++||++|+||.+ +.+++.+++.+++
T Consensus 6 ~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~ 76 (272)
T 3lul_A 6 VIEDK----GDMTPSFGIDDRIFLGEGLFETIRVN---SSK--PSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQKI 76 (272)
T ss_dssp ECCCC----C--CCCCCTTBGGGGTCEEEEEEEEE---TTE--ESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHH
T ss_pred EEECC----ccccccCCccchhhcceEeEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 67888 67789999999999999999999998 566 88999999999999999999987 9999999999999
Q ss_pred HHcCCcCCCCCCceEEEEEEEEecCCcccccCCCC--cEEEEEEeecCccccCCcccEEEEeeccceecCCCCCCCCccc
Q 020264 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPE--YTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAI 241 (328)
Q Consensus 164 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~~~--~~~~i~~~P~~~y~~~G~~~v~l~v~~~~~R~~p~~~~~~Kt~ 241 (328)
+.|.. .+.|||+.+..+.+..|+.++.. +++++. .|..+ ...++++.++ ++.|+.+++++++|++
T Consensus 77 ~~~~~-------~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~-~p~~~----~~~~v~l~~~-~~~r~~~~~~~~~Kt~ 143 (272)
T 3lul_A 77 QKDNL-------YHGGIKAILSGGPASRGLAERGQVSQLIFQT-FNYSI----QKHPVRLISI-NWLRDKANPLYQLKSV 143 (272)
T ss_dssp HHTTC-------SSEEEEEEEECCBCCSSTTCCCSSEEEEEEE-ECCCC----CCSCEEEEEE-EEEECTTCGGGGSCBS
T ss_pred HhcCC-------CCEEEEEEEEecCCccCcCCCCCCCcEEEEE-ECCCC----ccccEEEEEE-eEEecCCCcccchhhh
Confidence 98863 45688877775544677776533 455555 44322 2235788765 6899888889999995
Q ss_pred CChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEE
Q 020264 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYP 321 (328)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr 321 (328)
||+++++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++.+|||||||++||++|+++|++|+|+
T Consensus 144 -nyl~~~la~~~A~~~G~de~L~ld~--~g~v~E~~~sNif~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e~ 220 (272)
T 3lul_A 144 -NYLEAIIAQRQAIAVGADDALFFNT--ENHVTETTCANLFLIENNILYTPRVEDGILPGITRARLISHCQQHKMSVQEI 220 (272)
T ss_dssp -CCHHHHHHHHHHHHTTCSEEEEEET--TSBEEEESSCEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEEC
T ss_pred -ccHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCCeEEEEEECCEEECCCCccCcCcCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred eeecc
Q 020264 322 LLFGT 326 (328)
Q Consensus 322 ~i~~~ 326 (328)
+|+++
T Consensus 221 ~i~~~ 225 (272)
T 3lul_A 221 SLTKK 225 (272)
T ss_dssp CCBHH
T ss_pred ECCHH
Confidence 99864
No 13
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=1.7e-46 Score=354.93 Aligned_cols=219 Identities=20% Similarity=0.245 Sum_probs=190.3
Q ss_pred eEECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 020264 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (328)
Q Consensus 85 ~w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~ 164 (328)
.|.||+++ +.+++.|++|+||||||||||+| ||+ +|++++|++||++||++|+||.+ .+++.+++.++++
T Consensus 24 ~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~-~~~l~~~i~~~v~ 93 (292)
T 2xpf_A 24 DWVDGRPA----AELSVRDRGLAYGDGLFETLAVR---AGT--PRLLERHLARLEEGCRRLAIPLD-TAALRQELLAFCA 93 (292)
T ss_dssp EEETTEEC----SEEETTBHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHH
T ss_pred EEECCEEE----EEEcccchhhhcCcEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHH
Confidence 79999998 78999999999999999999997 676 78999999999999999999985 8999999999998
Q ss_pred HcCCcCCCCCCceEEEEEEEEecCCcccccCC--CCcEEEEEEeecCccccC-CcccEEEEeeccceecCCCCCCCCccc
Q 020264 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKE-GLAPLNLYVEDEFHRATPGGAGGVKAI 241 (328)
Q Consensus 165 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~i~~~P~~~y~~~-G~~~v~l~v~~~~~R~~p~~~~~~Kt~ 241 (328)
... ..|||+++..+.+.+|+.|+ .+++++|.+.|+++++.. ..+++++.+++ +.|..+.+++++|++
T Consensus 94 ~~~---------~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~-~~~~~~~~~~~~Kt~ 163 (292)
T 2xpf_A 94 ALG---------DGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACR-TRLAEQPLLAGLKHL 163 (292)
T ss_dssp HHC---------SEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECC-CCBCCCTTTTBCCBS
T ss_pred hCC---------CcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEee-eeccCCCCCCCcchh
Confidence 732 35899888744446777765 467899999999876521 13467788765 455555568899985
Q ss_pred CChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEE
Q 020264 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYP 321 (328)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr 321 (328)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++.+|||||||++||++|+++|++|+|+
T Consensus 164 -ny~~~~la~~~A~~~G~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E~ 240 (292)
T 2xpf_A 164 -NRLEQVLARAEWSDAGHAEGLMLDV--HERVVEGVFSNLLLVLDGTLVAPDLRRCGVAGVMRAELLERAEGIGVPLAIR 240 (292)
T ss_dssp -CCHHHHHHHTTCCCTTCSEEEEEBT--TCCEEEESSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHTTCCEEEE
T ss_pred -hhHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEEeCCCCCccCCCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred eeecc
Q 020264 322 LLFGT 326 (328)
Q Consensus 322 ~i~~~ 326 (328)
+|+++
T Consensus 241 ~i~~~ 245 (292)
T 2xpf_A 241 DVSMA 245 (292)
T ss_dssp CBCHH
T ss_pred eCCHH
Confidence 99864
No 14
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=6.7e-46 Score=354.47 Aligned_cols=225 Identities=20% Similarity=0.302 Sum_probs=158.5
Q ss_pred eEEC---CeE--eeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Q 020264 85 YFEK---GRL--SRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAV 159 (328)
Q Consensus 85 ~w~~---g~i--vp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~~~e~l~~~i 159 (328)
.|.| |++ +|.+++.|++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+||.++.+++.+++
T Consensus 17 v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i 91 (315)
T 3sno_A 17 LIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIR---DGH--ACNVRRHGERFKASAALLGLPEPILEDWEKAT 91 (315)
T ss_dssp EEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred EEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCcCHHHHHHHH
Confidence 6889 999 9999999999999999999999999998 566 78999999999999999999988999999999
Q ss_pred HHHHHHcCCcCCCCCCceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccccCC-cccEEEEeecc-c----------
Q 020264 160 KQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG-LAPLNLYVEDE-F---------- 227 (328)
Q Consensus 160 ~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~G-~~~v~l~v~~~-~---------- 227 (328)
+++++.+. +..+.++.|||++++.+.+..| .+++++++.|+++++... .+++++.+++. +
T Consensus 92 ~~~v~~~~---~~n~~~~~~iRl~vtrG~~~~g-----~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~ 163 (315)
T 3sno_A 92 QMGIESWY---SHPNAGEASCTWTLSRGRSSTG-----LASGWLTITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIG 163 (315)
T ss_dssp HHHHHHHH---TC--CCCEEEEEEEECCBTTTC-----CCEEEEEEEECCHHHHHHHHHCEEEEEEEC------------
T ss_pred HHHHHhhc---ccCCCCCEEEEEEEEeCCCCCC-----CCEEEEEEEECCCcchhhhcCCEEEEEecccccccccccccc
Confidence 99998732 1101357899998875443333 357888999988654210 13456665541 1
Q ss_pred -----------eecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCC
Q 020264 228 -----------HRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSG 296 (328)
Q Consensus 228 -----------~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~ 296 (328)
.|..|+.++++|++ ||+.++++.++|+++|+||+||+|. +| |+|++++|||+++||+|+||+++.
T Consensus 164 ~~~r~~~s~~~~~~~p~~l~~~Kt~-nyl~~vla~~~A~~~G~de~l~l~~--~G-v~E~s~sN~f~~~~g~l~TPp~~~ 239 (315)
T 3sno_A 164 KATRGELSKVERTPAPWLTVGAKTL-AYAANMAALRYAKSNGFDDVIFTDG--DR-VLEGATSTVVSFKGDKIRTPSPGG 239 (315)
T ss_dssp ------------------------------------------CEEEEEEET--TE-EEEESSSEEEEEETTEEEEECCC-
T ss_pred ccccccccccccccCcccccCcchh-ccHHHHHHHHHHHHcCCCEEEEEeC--CC-cEEcCCeeEEEEECCEEEcCCCCC
Confidence 13456667899997 9999999999999999999999997 89 999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHCCCeEEEEeeecc
Q 020264 297 TILAGITRKSIIEIASDCGFQVRYPLLFGT 326 (328)
Q Consensus 297 ~ILpGITR~svlela~~~G~~VeEr~i~~~ 326 (328)
+|||||||++|+++|+++|++|+|++++++
T Consensus 240 ~iL~GitR~~ll~~a~~~g~~v~e~~i~~~ 269 (315)
T 3sno_A 240 DILPGTTQAALFAHATEKGWRCKEKDLSID 269 (315)
T ss_dssp -----HHHHHHHHHHHHTTCEEEEECCBHH
T ss_pred CcChhHHHHHHHHHHHHcCCEEEEEECCHH
Confidence 999999999999999999999999999864
No 15
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-42 Score=319.65 Aligned_cols=205 Identities=20% Similarity=0.257 Sum_probs=171.5
Q ss_pred eEECCeEeeCCCcccCCCCCcccc-CCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Q 020264 85 YFEKGRLSRYGKIELSPSSGVLNY-GQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTA 163 (328)
Q Consensus 85 ~w~~g~ivp~~~~~l~~~~~~l~y-G~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~~~e~l~~~i~~lv 163 (328)
.|.||+.. +++.|++|+| |+|+|||||+| +|+ +|++++|++||.+||+.|+||.+..+++.+++.+++
T Consensus 2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~l~~~i~~~~ 70 (246)
T 2zgi_A 2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAE---GGR--PLWLEEHLARLRRHALALGLSYPGDEAFLEDLEALL 70 (246)
T ss_dssp EEETTEEC------CCSSCHHHHHSCCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred EEECCccc------CCCccCcccccCeeEEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 48899854 3899999999 99999999998 565 889999999999999999999773489999999998
Q ss_pred HHcCCcCCCCCCceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccccCCcccEEEEeeccceecCCCCCCCCcccCC
Q 020264 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISN 243 (328)
Q Consensus 164 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~G~~~v~l~v~~~~~R~~p~~~~~~Kt~~n 243 (328)
+.|. +.++.|||+++.+++..+|+.|.+ .+..+++..| +++.+++ + |..|+ ++++|++ |
T Consensus 71 ~~~~------~~~~~~vR~~v~~g~~~~~~~p~~--------~~~~~~~~~g---~~l~~~~-~-r~~~~-~~~~Kt~-n 129 (246)
T 2zgi_A 71 RAFP------KAPCLRLRFTVGEGVRLSEARPYA--------PLPLSLYREG---VRVRLTG-Y-RVHPD-LARYKTG-N 129 (246)
T ss_dssp TSCT------TCSEEEEEEEEETTEEEEEEEECC--------CCCTHHHHHC---BCEEEEE-E-ECCTT-TTTSCBS-C
T ss_pred HhcC------CCCCEEEEEEEECCCCccCcCcCC--------CCchhHhhcC---eEEEEec-c-cCCCC-Cccchhh-h
Confidence 7762 135789999887655444443221 1112233334 5576665 4 88887 8899997 8
Q ss_pred hHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEEee
Q 020264 244 YAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLL 323 (328)
Q Consensus 244 Y~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr~i 323 (328)
|..+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|| .++||||||++||++|+++|++|+|++|
T Consensus 130 ~~~~~~a~~~A~~~g~de~l~ld~--~G~v~Egs~sNif~v~~g~l~TP---~~iL~GitR~~ll~~a~~~g~~v~E~~i 204 (246)
T 2zgi_A 130 YLPYRLALEEARKEGAFEGLLLDA--FGHVVDGSRTSPLLFREGTLYLL---EGGLEGITREKVAEAARGLGLRVERGLF 204 (246)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEEE---CSSCCCHHHHHHHHHHHHTTCEEEEECC
T ss_pred hHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEECC---CCccCcHHHHHHHHHHHHCCCeEEEEeC
Confidence 999999999999999999999997 89999999999999999999999 7899999999999999999999999999
Q ss_pred ecc
Q 020264 324 FGT 326 (328)
Q Consensus 324 ~~~ 326 (328)
+++
T Consensus 205 ~~~ 207 (246)
T 2zgi_A 205 RPE 207 (246)
T ss_dssp CGG
T ss_pred CHH
Confidence 875
No 16
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=2.6e-42 Score=325.16 Aligned_cols=208 Identities=21% Similarity=0.239 Sum_probs=180.2
Q ss_pred EECCeEeeCCCcccCCCCCccccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHH
Q 020264 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164 (328)
Q Consensus 86 w~~g~ivp~~~~~l~~~~~~l~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv~ 164 (328)
|.+|++++..++.+++.|++| |||+|||||+| +|+ +|++++|++||++||++|+||.+ +.+++.+++.++++
T Consensus 18 ~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~l~~~i~~~~~ 90 (285)
T 3csw_A 18 RGKFRRADEISLDFSLFEKSL--QGAVYETLRTY---SRA--PFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGAD 90 (285)
T ss_dssp TTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHTTTCCCSSCHHHHHHHHHHHHT
T ss_pred ccCceEcccccCEeCCccccc--ceeeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 889999999999999999999 99999999998 566 89999999999999999999965 99999999999998
Q ss_pred HcCCcCCCCCCceEEEEEEEEecCCcccccCCCCcEEEEEEeecCccccCCcccEEEEeeccceecCCC-CCCCCcccCC
Q 020264 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPG-GAGGVKAISN 243 (328)
Q Consensus 165 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~G~~~v~l~v~~~~~R~~p~-~~~~~Kt~~n 243 (328)
.+. +..|||+++... .++++|.+.|+++++ ..+++++.+++ +.|..++ .+.++|++ |
T Consensus 91 ~~~--------~~~~iR~~v~~~----------~~~~~i~~~p~~~~~--~~~~~~l~~~~-~~~~~~~~~~~~~Kt~-~ 148 (285)
T 3csw_A 91 EFK--------QEVRIKVYLFPD----------SGEVLFVFSPLNIPD--LETGVEVKISN-VRRIPDLSTPPALKIT-G 148 (285)
T ss_dssp TCS--------SCEEEEEEECTT----------TCCEEEEEEECCCCC--CTTCEEEEECS-SCCCCTTTSCTTCCBT-T
T ss_pred hhC--------CCeEEEEEEEcC----------CCEEEEEEEeCCCcc--ccCCeEEEEEe-EEecCCCCCCCccchh-c
Confidence 763 347999877211 126888899998765 23567787764 5554333 34799997 6
Q ss_pred hHHHHHHHHHHHhcCCCeEEEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEEee
Q 020264 244 YAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLL 323 (328)
Q Consensus 244 Y~~~l~a~~eA~~~G~ddvL~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr~i 323 (328)
|.++++++++|++ +||+||+|. +|+|+|++++|||+++||+|+||+++.++||||||++||++|+++|++|+|+++
T Consensus 149 ~l~~~la~~~A~~--~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i 224 (285)
T 3csw_A 149 RTDIVLARREIVD--CYDVILLGL--NGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVV 224 (285)
T ss_dssp CHHHHHHHTTCSS--SSEEEEECT--TSBEEEESSSEEEEEETTEEEEECGGGTCCCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred cHHHHHHHHHHHh--CCeEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCccCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 9999999988877 999999997 899999999999999999999999999999999999999999999999999999
Q ss_pred ecc
Q 020264 324 FGT 326 (328)
Q Consensus 324 ~~~ 326 (328)
+++
T Consensus 225 ~~~ 227 (285)
T 3csw_A 225 WVW 227 (285)
T ss_dssp BHH
T ss_pred CHH
Confidence 864
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=4.7e-37 Score=279.47 Aligned_cols=185 Identities=15% Similarity=0.131 Sum_probs=160.1
Q ss_pred ccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCceEEEEEEEEe
Q 020264 107 NYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVG 186 (328)
Q Consensus 107 ~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g 186 (328)
.-|+|+|||||+| ++|+ +|++++|++||.+||++|+||. +.+++.+++.++++ +. .+.+|||+++..
T Consensus 13 ~~g~glFEtir~~--~~G~--~~~l~~Hl~RL~~Sa~~l~~~~-~~~~l~~~i~~~~~-~~-------~~~~~iR~~~~~ 79 (221)
T 3qqm_A 13 TADFELIETMRWQ--PGTS--FLRFDRHLARLYGSAAELGFAC-DPQRIAEVLSDALD-GA-------RTAMRTRLALAR 79 (221)
T ss_dssp TSCCEEEEEEEEE--TTTE--ETTHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHT-TC-------CSCEEEEEEEET
T ss_pred CCCCEEEEEEEEe--cCCc--CcCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHh-cC-------CCCEEEEEEEEc
Confidence 4688999999998 3676 7899999999999999999995 78999999999986 32 367899988875
Q ss_pred cCCcccccCCCCcEEEEEEeecCccccCCcccEEEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeEEEEc
Q 020264 187 SGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLD 266 (328)
Q Consensus 187 ~~~~lg~~p~~~~~~~i~~~P~~~y~~~G~~~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddvL~ld 266 (328)
++ .+.|.+.|+++++. .+++++.+++ +.|..+++++++|++ ||..+.+++++|+++|+||+||+|
T Consensus 80 ~g-----------~~~i~~~p~~~~~~--~~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~~~a~~~a~~~g~~e~l~l~ 144 (221)
T 3qqm_A 80 NG-----------DATASAQPYEPLAA--DKVWILRLAR-TRLDSQNTLLRHKTS-RRQLYTHARSEYLVTQADEVLLAN 144 (221)
T ss_dssp TS-----------CEEEEEEECCCCCT--TCCEEEEECS-CCBCTTCGGGGSCBS-CCHHHHHHHHTSCTTTCSEEEEEB
T ss_pred CC-----------CEEEEEEcCCCCCC--CCCEEEEEee-eEecCCCcchhchhc-chHHHHHHHHHHHhcCCcEEEEEC
Confidence 43 36788889887653 2467788765 677777788999995 999999999999999999999999
Q ss_pred CCCCCeEEeeCceeEEEEEC-CEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEEeeecc
Q 020264 267 SVNKKNLEEVSSCNIFILKG-NIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGT 326 (328)
Q Consensus 267 ~~~~g~V~E~s~sNif~v~~-~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr~i~~~ 326 (328)
. +|+|+|++++|||+++| |+|+||+++.++||||||+.||+++ +|+|++|+++
T Consensus 145 ~--~g~v~E~s~sNif~~~~~~~l~TP~~~~~~L~GitR~~ll~~~-----~v~e~~i~~~ 198 (221)
T 3qqm_A 145 E--RGEICEGTITNVFADFGDGVLATPRLDCGLLPGVLRAELLDEG-----RAEEAIYSYD 198 (221)
T ss_dssp T--TSCEEEESSCEEEEECSSSCEEEECGGGTCCCCHHHHHHHHTT-----SEEEECCCHH
T ss_pred C--CCeEEEcCceeEEEEeCCCEEECCCCccCcchHHHHHHHHhhC-----cEEEEeCCHH
Confidence 7 89999999999999998 9999999999999999999999975 7999998864
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=1.5e-34 Score=257.41 Aligned_cols=172 Identities=13% Similarity=0.118 Sum_probs=138.3
Q ss_pred ccCCcEEEEEEEEEecCCeEeecChHHHHHHHHHHH-HHcCCC--CC-CHHHHHHHHHHHHHHcCCcCCCCCCceEEEEE
Q 020264 107 NYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGA-ERMCMP--SP-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRP 182 (328)
Q Consensus 107 ~yG~gvFEgmkay~~~dG~i~lFrl~~Hl~RL~~Sa-~~l~ip--~~-~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp 182 (328)
+||+++|||||+| +|+ +|++++|++||++|| ++++|| .+ +.+++.+++. +++.++ .+++|||+
T Consensus 2 ~~g~~vfEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~-------~~~~~iR~ 68 (194)
T 3ceb_A 2 MWQFPLFETILIE---QGQ--AKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHR-------EGLIRCRI 68 (194)
T ss_dssp CTTCCEEEEEEEE---TTE--ECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCS-------SSEEEEEE
T ss_pred CCCCeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCC-------CCCEEEEE
Confidence 6999999999998 676 789999999999999 999999 44 8999999888 777654 36899998
Q ss_pred EEEecCCcccccCCCCcEEEEEEeecCccccCCcccEEEEeeccceecCCCCCCCCcccCChHHHHHHHHHHHhcCCCeE
Q 020264 183 LLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDV 262 (328)
Q Consensus 183 ~~~g~~~~lg~~p~~~~~~~i~~~P~~~y~~~G~~~v~l~v~~~~~R~~p~~~~~~Kt~~nY~~~l~a~~eA~~~G~ddv 262 (328)
++..+. .+ +...|..+ .++...+ ....+.+++++|++ ||. ++++.+|+++|+||+
T Consensus 69 ~~~~g~--~~----------~~~~p~~~---~~~~~~~-------~~~~~~~~~~~Kt~-n~~--~~~~~~A~~~g~de~ 123 (194)
T 3ceb_A 69 DYNHHD--YV----------LQCFPYQQ---KVYRTFK-------PVFCDHIDYSLKFS-DRT--LLNNLLKQKEECDEI 123 (194)
T ss_dssp EECSSC--EE----------EEEEEECC---CCCCCEE-------EEECSSCCCSSCBS-CCH--HHHHHHGGGTTSSEE
T ss_pred EEeCCc--cE----------EEEecCCC---CcEEEEE-------EecCCCcchhhccc-CHH--HHHHHHHhhCCCCEE
Confidence 765431 11 22334322 1221111 12234568899985 898 568889999999999
Q ss_pred EEEcCCCCCeEEeeCceeEEEEECCEEEcCCCCCCCcchHHHHHHHHHHHHCCCeEEEEeeecc
Q 020264 263 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVRYPLLFGT 326 (328)
Q Consensus 263 L~ld~~~~g~V~E~s~sNif~v~~~~liTP~l~~~ILpGITR~svlela~~~G~~VeEr~i~~~ 326 (328)
||+ . +|+|+|++++|||+++||+|+||+ .++||||||++||+ +++|+|++|+++
T Consensus 124 l~l-~--~G~v~E~s~sNif~~~~g~l~TP~--~~~L~GitR~~ll~-----~~~v~e~~i~~~ 177 (194)
T 3ceb_A 124 MII-R--QGKVTDCSIGNLIFRQNNQWITPD--KPLLEGTQRAKLLE-----QKKIIAREIFFE 177 (194)
T ss_dssp EEE-E--TTEECCCSSSEEEEEETTEEEEES--SCSSCCHHHHHHHH-----TTSSEEECCBGG
T ss_pred EEE-e--CCEEEEeccEEEEEEECCEEECCC--CCCcChHHHHHHHc-----CCCEEEecCCHH
Confidence 999 6 899999999999999999999999 78999999999998 689999999875
Done!