BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020269
(328 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1 OS=Homo sapiens GN=RIOK1 PE=1
SV=2
Length = 568
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 235/322 (72%), Gaps = 7/322 (2%)
Query: 10 HGGLHSRTNASTLQPLSNRNQKFTNHIRPSPLEEWEGRMNV---GMSNSVTTAIRESVRD 66
+GG + + N T S + + + L ++E ++N+ +++SV + E R
Sbjct: 86 NGGSNPQANRQTSDSSSAKMSTPADKV----LRKFENKINLDKLNVTDSVINKVTEKSRQ 141
Query: 67 MAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSD 126
+ +KADRATVEQ +DPRTRM+LFKML RG+ +INGCISTGKEANVYHA+ ++
Sbjct: 142 KEADMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIITEINGCISTGKEANVYHASTAN 201
Query: 127 GQELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAG 186
G+ A+K+YKTS+LVFKDRD+YV G++RFR+GYCK NPRKMVKTWAEKEMRNL+RL A
Sbjct: 202 GESRAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAE 261
Query: 187 IRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLV 246
I CP P +LR HVLVM FIGK AP LK+ LS K RE Y+++I MR +YQ +LV
Sbjct: 262 IPCPEPIMLRSHVLVMSFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRRMYQDARLV 321
Query: 247 HGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIREL 306
H DLSE+N+LY G +YIIDVSQ+V+ DHPHAL+FLR+DC +V+DFF +H VAVMT+REL
Sbjct: 322 HADLSEFNMLYHGGGVYIIDVSQSVEHDHPHALEFLRKDCANVNDFFMRHSVAVMTVREL 381
Query: 307 FDFVVDPTIADDSVDSYLEEVV 328
F+FV DP+I +++D+YL + +
Sbjct: 382 FEFVTDPSITHENMDAYLSKAM 403
>sp|Q54VD8|RIO1_DICDI Serine/threonine-protein kinase rio1 OS=Dictyostelium discoideum
GN=rio1 PE=3 SV=1
Length = 574
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/316 (56%), Positives = 229/316 (72%), Gaps = 8/316 (2%)
Query: 21 TLQPLSNR-NQKFTNHIRPSPLEEWEGRMNV-------GMSNSVTTAIRESVRDMAIGKT 72
TLQP + QK+ N I + + V + NSV +I+E +
Sbjct: 91 TLQPKAQALEQKYQNKINVNSIANSISSKRVIDDDSHRALPNSVQNSIKEIKKKDDKQGV 150
Query: 73 KTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAV 132
+ +K DRAT EQ +DPRTR++LFKM+N+G F +INGCISTGKEANVYHA + +E AV
Sbjct: 151 RIVDKEDRATTEQVLDPRTRLMLFKMINKGAFSEINGCISTGKEANVYHAFTPNEEERAV 210
Query: 133 KVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTP 192
KVYKTS+LVFKDRDRYV G++RFR GY KHNPRKMVK WAEKE RNL RLK AGI CPTP
Sbjct: 211 KVYKTSILVFKDRDRYVTGEFRFRRGYSKHNPRKMVKVWAEKEFRNLTRLKNAGIPCPTP 270
Query: 193 YLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSE 252
+LR H+LVM FIGK G+AAPRLKDA +S +K Y++ I MRTL+ +C+LVH DLSE
Sbjct: 271 LILRNHILVMTFIGKDGYAAPRLKDATVSQEKFGVIYLDCIKMMRTLFHKCRLVHADLSE 330
Query: 253 YNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIRELFDFVVD 312
YN+LY++ LYIIDVSQ+V+ DHPH+LDFLR DC +V+DFF+K V M I+ELF+F+ D
Sbjct: 331 YNMLYYKNQLYIIDVSQSVEHDHPHSLDFLRMDCSNVTDFFRKKEVNTMFIQELFEFITD 390
Query: 313 PTIADDSVDSYLEEVV 328
TI +D++D YLE+++
Sbjct: 391 LTITEDNIDQYLEKML 406
>sp|Q922Q2|RIOK1_MOUSE Serine/threonine-protein kinase RIO1 OS=Mus musculus GN=Riok1 PE=2
SV=2
Length = 567
Score = 361 bits (926), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 235/323 (72%), Gaps = 9/323 (2%)
Query: 10 HGGLHSRTNASTLQPLSNRNQ-KFTNHIRPSPLEEWEGRMNVG---MSNSVTTAIRESVR 65
+GG + + N T SN N K + I S L ++E ++N+ +++SVT + +R
Sbjct: 85 NGGSNYQANRQT----SNYNSAKMSTPIDKS-LRKFENKINLNKLNVTDSVTNKVTVKLR 139
Query: 66 DMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKS 125
+ +KADRATVEQ +DPRTRM+LFK+L++ +I+GCISTGKEANVY+A+
Sbjct: 140 QKEAESYRIKDKADRATVEQVLDPRTRMILFKLLHKDHISEIHGCISTGKEANVYYASTP 199
Query: 126 DGQELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAA 185
G+ A+K+YKTS+L+FKDRD+YV G++RFR GYCK NPRKMV+TWAEKEMRNL RLK A
Sbjct: 200 SGESRAIKIYKTSILMFKDRDKYVTGEFRFRRGYCKGNPRKMVRTWAEKEMRNLCRLKTA 259
Query: 186 GIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKL 245
I CP P LR HVL+M FIGK AP LK+ LS K RE Y+++I MR +YQ +L
Sbjct: 260 NIPCPEPIRLRSHVLLMGFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRKMYQDARL 319
Query: 246 VHGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIRE 305
VH DLSE+N+LY G +YIIDVSQ+V+ DHPHAL+FLR+DC +V+DFF KH VAVMT+RE
Sbjct: 320 VHADLSEFNMLYHGGDVYIIDVSQSVEHDHPHALEFLRKDCTNVNDFFSKHAVAVMTVRE 379
Query: 306 LFDFVVDPTIADDSVDSYLEEVV 328
LFDFV DP+I D++D+YLE+ +
Sbjct: 380 LFDFVTDPSITADNMDAYLEKAM 402
>sp|O42650|RIO1_SCHPO Serine/threonine-protein kinase rio1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rio1 PE=3 SV=2
Length = 497
Score = 305 bits (781), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 137/246 (55%), Positives = 183/246 (74%), Gaps = 1/246 (0%)
Query: 68 AIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDG 127
A K+ +K+DRAT EQ +DPRTRM+L K++N G +INGCISTGKEANVYHAT DG
Sbjct: 83 AEDKSSIKDKSDRATSEQVLDPRTRMILLKLINNGTISEINGCISTGKEANVYHATNEDG 142
Query: 128 QELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGI 187
+ A+K+YKTS+LVFKDRDRYV G++RFR+GY K NPRKMV+ WAEKE+RNL R+ AAGI
Sbjct: 143 KHFAIKIYKTSILVFKDRDRYVSGEFRFRHGYNKRNPRKMVRLWAEKEIRNLKRVAAAGI 202
Query: 188 RCPTPYLLRLHVLVMEFIG-KAGWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLV 246
CP P LL+ HVL+M F+G K GWA P+LKD ++ + + Y + MR L+ C LV
Sbjct: 203 PCPEPILLKQHVLLMSFLGDKKGWAYPKLKDIDMTPGEATKLYQLVARNMRILFHVCHLV 262
Query: 247 HGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIREL 306
H DLSEYN+LY +G +Y IDVSQ+V+ DHP ++DFLR D +++S FF++ +++ +L
Sbjct: 263 HADLSEYNLLYHKGKVYFIDVSQSVEHDHPQSIDFLRMDILNISTFFRRLNAGCLSLPQL 322
Query: 307 FDFVVD 312
F F+ +
Sbjct: 323 FKFITE 328
>sp|Q9DBU3|RIOK3_MOUSE Serine/threonine-protein kinase RIO3 OS=Mus musculus GN=Riok3 PE=2
SV=3
Length = 519
Score = 262 bits (669), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 193/292 (66%), Gaps = 12/292 (4%)
Query: 48 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDI 107
M++ +SN V A+++ + EK + +T E+A+DP+TR++++KM+N G+ I
Sbjct: 194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETI 253
Query: 108 NGCISTGKEANVYHA-------TKSDGQ----ELAVKVYKTSVLVFKDRDRYVQGDYRFR 156
GCISTGKE+ V+HA K DG+ E A+KV+KT++ FK+RD+Y++ D+RF+
Sbjct: 254 TGCISTGKESVVFHAYGGSLEDEKEDGKAIPTECAIKVFKTTLNEFKNRDKYIKDDFRFK 313
Query: 157 YGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLK 216
+ K NPRK+++ WAEKEM NL R++ AGI CPT LL+ H+LVM FIG AP+LK
Sbjct: 314 DRFSKLNPRKIIRMWAEKEMHNLTRMQKAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLK 373
Query: 217 DAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHP 276
+ LS +++++ Y + + M+ LY C LVH DLSEYN+L+ G +++IDVSQ+V+ HP
Sbjct: 374 EVKLSNEEMKDAYYQTLHLMQQLYNECTLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHP 433
Query: 277 HALDFLREDCVHVSDFFKKHGVA-VMTIRELFDFVVDPTIADDSVDSYLEEV 327
H L+FL DC +VS FF+K GV + RELF+ V I+ D+ +L E+
Sbjct: 434 HGLEFLFRDCRNVSQFFQKGGVTEALNERELFNAVSGLNISADNEADFLAEI 485
>sp|O14730|RIOK3_HUMAN Serine/threonine-protein kinase RIO3 OS=Homo sapiens GN=RIOK3 PE=1
SV=2
Length = 519
Score = 260 bits (664), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 192/292 (65%), Gaps = 12/292 (4%)
Query: 48 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDI 107
M++ +SN V A+++ + EK + +T E+A+DP+TR++++KM+N G+ I
Sbjct: 194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETI 253
Query: 108 NGCISTGKEANVYHA-------TKSDGQ----ELAVKVYKTSVLVFKDRDRYVQGDYRFR 156
GCISTGKE+ V+HA K D + E A+KV+KT++ FK+RD+Y++ D+RF+
Sbjct: 254 TGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFK 313
Query: 157 YGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLK 216
+ K NPRK+++ WAEKEM NL R++ AGI CPT LL+ H+LVM FIG AP+LK
Sbjct: 314 DRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLK 373
Query: 217 DAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHP 276
+ L+ ++++E Y + + MR LY C LVH DLSEYN+L+ G +++IDVSQ+V+ HP
Sbjct: 374 EVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHP 433
Query: 277 HALDFLREDCVHVSDFFKKHGV-AVMTIRELFDFVVDPTIADDSVDSYLEEV 327
H L+FL DC +VS FF+K GV ++ RELF+ V I D+ +L E+
Sbjct: 434 HGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEADFLAEI 485
>sp|Q1RMT7|RIOK3_BOVIN Serine/threonine-protein kinase RIO3 OS=Bos taurus GN=RIOK3 PE=2
SV=1
Length = 519
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 193/292 (66%), Gaps = 12/292 (4%)
Query: 48 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDI 107
M++ +SN V A+++ + EK + +T E+A+DP+TR++++KM+N G+ I
Sbjct: 194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETI 253
Query: 108 NGCISTGKEANVYHA---TKSDGQE--------LAVKVYKTSVLVFKDRDRYVQGDYRFR 156
GCISTGKE+ V+HA + DG+E A+KV+KT++ FK+RD+Y++ D+RF+
Sbjct: 254 TGCISTGKESVVFHAYGGSMEDGKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFK 313
Query: 157 YGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLK 216
+ K NPRK+++ WAEKEM NL R++ AGI CPT LL+ H+LVM FIG AP+LK
Sbjct: 314 DRFSKLNPRKIIRMWAEKEMHNLTRMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLK 373
Query: 217 DAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHP 276
+ LS +++++ Y + + M+ LY C LVH DLSEYN+L+ G +++IDVSQ+V+ HP
Sbjct: 374 EVKLSSEEMKDAYYQTLHLMQQLYDECTLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHP 433
Query: 277 HALDFLREDCVHVSDFFKKHGV-AVMTIRELFDFVVDPTIADDSVDSYLEEV 327
H L+FL DC +VS FF+K GV + RELF+ V I+ D+ +L E+
Sbjct: 434 HGLEFLFRDCRNVSQFFQKGGVKEALGERELFNAVSGLNISADNEADFLAEI 485
>sp|Q12196|RIO1_YEAST Serine/threonine-protein kinase RIO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RIO1 PE=1 SV=1
Length = 484
Score = 252 bits (643), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 181/275 (65%), Gaps = 25/275 (9%)
Query: 66 DMAIGKTKTS-EKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATK 124
+++ + KTS +KA+RATVE +DPRT L M+ RGV D+NGC+STGKEANVYHA
Sbjct: 36 ELSFSRAKTSKDKANRATVENVLDPRTMRFLKSMVTRGVIADLNGCLSTGKEANVYHAFA 95
Query: 125 SDGQ---------------------ELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHN 163
G+ E A+K+YKTS+LVFKDR+RYV G++RFR +HN
Sbjct: 96 GTGKAPVIDEETGQYEVLETDGSRAEYAIKIYKTSILVFKDRERYVDGEFRFRNSRSQHN 155
Query: 164 PRKMVKTWAEKEMRNLMRLKAAG-IRCPTPYLLRLHVLVMEFIGKA-GWAAPRLKDAAL- 220
PRKM+K WAEKE RNL R+ +G I P P ++ +VLVMEF+ + G+A+P+LKD
Sbjct: 156 PRKMIKIWAEKEFRNLKRIYQSGVIPAPKPIEVKNNVLVMEFLSRGNGFASPKLKDYPYK 215
Query: 221 SLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALD 280
+ D++ Y M+ MR LYQ C+LVH DLSEYN + + LY+IDVSQ+V+ +HP +LD
Sbjct: 216 NRDEIFHYYHTMVAYMRLLYQVCRLVHADLSEYNTIVHDDKLYMIDVSQSVEPEHPMSLD 275
Query: 281 FLREDCVHVSDFFKKHGVAVMTIRELFDFVVDPTI 315
FLR D +V+ +F+K G+++ R +F FV+ T+
Sbjct: 276 FLRMDIKNVNLYFEKMGISIFPERVIFQFVISETL 310
>sp|Q8SVI7|RIO1_ENCCU Probable serine/threonine-protein kinase RIO1 homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=RIO1 PE=3
SV=1
Length = 409
Score = 204 bits (519), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 170/277 (61%), Gaps = 30/277 (10%)
Query: 73 KTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVY------------ 120
+ +K+DRATV++ +D RT VL ++ RG ++ G + TGKE+NVY
Sbjct: 31 RKKDKSDRATVDKVLDKRTLKVLERLQARGKLVNLQGSLCTGKESNVYLGEASTSLCSKF 90
Query: 121 -----HATKSDGQE-----LAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKT 170
T+ G+E + VK++KTS++ F+DR+RY++ + RF+ +C N RK++K
Sbjct: 91 IKNRYSVTEEPGREGQIVPVVVKIFKTSIMSFRDRERYIRSEKRFQR-FCTSNSRKLIKV 149
Query: 171 WAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYV 230
WAEKE+RNL RL AGI P P L+ ++LVM IG+ APRL+DA S+ L Y
Sbjct: 150 WAEKEVRNLKRLNNAGIPSPEPIYLKNNILVMTQIGRCSEVAPRLRDA--SIKDLEGCYQ 207
Query: 231 EMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVS 290
+ + +R +Y++ LVH DLSE+N+LYFEG +Y+IDV Q+V++DH +A FL D +++
Sbjct: 208 QCVKIIRDMYKKAGLVHADLSEFNLLYFEGVVYVIDVGQSVEIDHDNAQRFLIMDINNIN 267
Query: 291 DFFKKHGVAVMTIRELFDFVVDPTIADDSVDSYLEEV 327
FF + GV+V +LF+ I+ + + YL+++
Sbjct: 268 SFFSRKGVSVAKGNDLFE-----EISGNVIPLYLKDI 299
>sp|P34649|YOT3_CAEEL Putative RIO-type serine/threonine-protein kinase 3
OS=Caenorhabditis elegans GN=riok-3 PE=3 SV=1
Length = 510
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 162/263 (61%), Gaps = 17/263 (6%)
Query: 67 MAIGKTKTS------EKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVY 120
MA GK+++ +K ++AT++ ++D TR++L K +N+GVF ++G I+TGKE+ V
Sbjct: 203 MAFGKSESKRQMRNKDKEEKATMDTSVDSDTRLLLLKWINQGVFDSVDGIIATGKESAVL 262
Query: 121 HATKSDGQELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLM 180
HA + A+KVYKT++ FK+R YV+ D+RF+ NPR ++K WAE+E NL
Sbjct: 263 HAAQDSATSYAIKVYKTTLSEFKNRSEYVKDDFRFK------NPRGVLKIWAEREFMNLS 316
Query: 181 RLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSL---DKLREGYVEMIIAMR 237
R+ G+ CP P +R +VLVM F+G G AAPRLK+ D+ R Y ++ M
Sbjct: 317 RMAKHGLPCPQPVKVRRNVLVMSFLGDQGLAAPRLKNVEWEFFTDDERRNVYDQVQSIMC 376
Query: 238 TLYQRCKLVHGDLSEYNILYF-EGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKH 296
+Y+ C LVH DLSE+N+L + +++IDVSQA+DL HP +L FL D ++ FF +
Sbjct: 377 RMYKECLLVHADLSEFNLLLTPDNKVHVIDVSQAMDLSHPRSLQFLTRDIQNIITFFTRI 436
Query: 297 GVAVM-TIRELFDFVVDPTIADD 318
G + T +LF+ + D + +D
Sbjct: 437 GTPNLPTYVQLFNLITDLDMVED 459
>sp|O28471|RIO1_ARCFU RIO-type serine/threonine-protein kinase Rio1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=rio1 PE=1 SV=1
Length = 258
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 134/233 (57%), Gaps = 8/233 (3%)
Query: 71 KTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKS-DGQ- 128
+ K + +R + +D RT L+K+ +G + G ISTGKEANV++A DG+
Sbjct: 15 RIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKP 74
Query: 129 -ELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGI 187
+AVK+Y+ F D Y+ GD RF + +P++ V W EKE RNL R K AG+
Sbjct: 75 VAMAVKIYRIETSEFDKMDEYLYGDERF--DMRRISPKEKVFIWTEKEFRNLERAKEAGV 132
Query: 188 RCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLR-EG-YVEMIIAMRTLYQRCKL 245
P PY +VL+MEFIG+ AP L + L +L EG + +++ ++ LYQ +L
Sbjct: 133 SVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAEL 192
Query: 246 VHGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGV 298
VH DLSEYNI+Y + +Y ID+ QAV L HP A +L D ++ FF K+GV
Sbjct: 193 VHADLSEYNIMYID-KVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFSKYGV 244
>sp|Q57886|RIO1_METJA RIO-type serine/threonine-protein kinase Rio1 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rio1 PE=3 SV=1
Length = 290
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 134/245 (54%), Gaps = 11/245 (4%)
Query: 79 DRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYKTS 138
D T + D RT M LF +L + G +++GKEA V+ A K AVKVY+ +
Sbjct: 50 DLKTANEVFDKRTLMTLFSLLAGKHLTEYIGIVNSGKEAVVFKARKGKFYR-AVKVYRVA 108
Query: 139 VLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLH 198
FK +Y+QGD RF K + R+++ W EKE RNL R + I P L R +
Sbjct: 109 TCDFKTMSKYIQGDPRFHLR--KSSRRQIIHAWVEKEFRNLRR-ASEIINAPKARLRREN 165
Query: 199 VLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMII-AMRTLYQRCKLVHGDLSEYNILY 257
VLVM+F+G G AP+LKD LD E Y ++I +M+ LY+ +LVHGDLSEYNIL
Sbjct: 166 VLVMDFVGYRGIPAPKLKDMQ-DLD--WEKYFKIIKESMKKLYEEGELVHGDLSEYNILV 222
Query: 258 FEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIRELFDFVVDPTIAD 317
+ ID SQ+V HP A L DC+++ +FF++ V ++L+ ++ I
Sbjct: 223 KDDEPVFIDFSQSVITQHPLAHPLLIRDCINICNFFRRKRVDC-NYKDLYKYITGKEI-- 279
Query: 318 DSVDS 322
D +D
Sbjct: 280 DPIDE 284
>sp|Q03021|RIO1_THEAC RIO-type serine/threonine-protein kinase Rio1 OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=rio1 PE=3 SV=1
Length = 186
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 102/170 (60%), Gaps = 10/170 (5%)
Query: 130 LAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRC 189
+AVK++K S L F +Y++GD RF N +V W KE NLM L+ A +
Sbjct: 12 VAVKIFKMSTLKFMSIRKYIEGDQRFSKIRIDRN--DIVPVWVRKEYTNLMALENAHVPA 69
Query: 190 PTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREG-YVEMIIAMRTLYQRCKLVHG 248
P P ++LVM +IG AP+LKD + EG Y ++I MR +Y ++VH
Sbjct: 70 PKPIGFFKNILVMSYIGTKSGPAPQLKDVEID-----EGIYDQVIDGMRRMYAN-RIVHA 123
Query: 249 DLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGV 298
DLSEYN+L F +Y ID++QAVD+DHP A +FL D V+VS+FF+KHG+
Sbjct: 124 DLSEYNML-FHRKVYFIDLAQAVDMDHPMAAEFLERDIVNVSNFFQKHGI 172
>sp|Q58473|RIO2_METJA RIO-type serine/threonine-protein kinase Rio2 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rio2 PE=3 SV=1
Length = 270
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 98 MLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYKTSVLVFKDRDRYVQGDYRFRY 157
+ +G+ I + GKE +VY SDG+E +K +K F RY
Sbjct: 58 FVKKGILKAIGNKLGVGKEGDVYTVLLSDGREAVLKFHKHGRTCFTRGKRY--------R 109
Query: 158 GYC--KHNPRKMV--KTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGK-AGWAA 212
GY KH+ + + AE+E L L ++ P P H ++M GK G
Sbjct: 110 GYLADKHHISWLYVSRLTAEREFEILNELFPI-VKVPEPIEWNRHAIIM---GKVVGEEL 165
Query: 213 PRLK-DAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFE-GHLYIIDVSQA 270
RL +S +++++ + ++I ++ Y+ +HGDLSE+NIL E G IID QA
Sbjct: 166 KRLDLSEFMSKEEIKDLFWKIIEEVKKAYE-IGYIHGDLSEFNILLDENGDFVIIDWPQA 224
Query: 271 VDLDHPHALDFLREDCVHVSDFFKKHGV 298
V HP A +L+ D +V +FKK+ +
Sbjct: 225 VPKYHPDAEFYLKRDIWNVIRYFKKYKI 252
>sp|Q9BVS4|RIOK2_HUMAN Serine/threonine-protein kinase RIO2 OS=Homo sapiens GN=RIOK2 PE=1
SV=2
Length = 552
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 93 MVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVY---KTSVLVFKDRDRYV 149
+ L + +R V + + GKE+++Y +GQ+ A+K++ +TS K++ Y
Sbjct: 83 LALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQFALKLHRLGRTSFRNLKNKRDYH 142
Query: 150 QGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFI-GKA 208
+ + + Y + + A KE + L P P H +VME I G
Sbjct: 143 KHRHNVSWLY-------LSRLSAMKEFAYMKALYERKFPVPKPIDYNRHAVVMELINGYP 195
Query: 209 GWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEG-HLYIIDV 267
++D A D+ +E+I+ + L+HGD +E+N++ E H+ +ID
Sbjct: 196 LCQIHHVEDPASVYDEA----MELIVKLANH----GLIHGDFNEFNLILDESDHITMIDF 247
Query: 268 SQAVDLDHPHALDFLREDCVHVSDFFKK 295
Q V HP+A + D + DFF K
Sbjct: 248 PQMVSTSHPNAEWYFDRDVKCIKDFFMK 275
>sp|P40160|RIO2_YEAST Serine/threonine-protein kinase RIO2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RIO2 PE=1 SV=1
Length = 425
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 93 MVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVY---KTSVLVFKDRDRYV 149
+ L MLNR + + I GKE+++Y + +G +K++ +TS ++ Y+
Sbjct: 83 LALKTMLNRDTVYSVGNTIGVGKESDIYKVSDKNGNPRVMKIHRLGRTSFHSVRNNRDYL 142
Query: 150 QGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAG 209
+ + N + + A KE + + L + G + P P+ H++VME I G
Sbjct: 143 KKSNQ------GANWMHLSRLAANKEYQFMSMLYSKGFKVPEPFDNSRHIVVMELI--EG 194
Query: 210 WAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEG-------HL 262
+ RL+ ++ KL + I+ + L+H D +E+NI+ +
Sbjct: 195 YPMRRLRKHK-NIPKLYSDLMCFIVDLAN----SGLIHCDFNEFNIMIKDKLEDENDCGF 249
Query: 263 YIIDVSQAVDLDHPHALDFLREDCVHVSDFFKK 295
+ID Q + + H A + + D + FFKK
Sbjct: 250 VVIDFPQCISIQHQDADYYFQRDVDCIRRFFKK 282
>sp|Q9CQS5|RIOK2_MOUSE Serine/threonine-protein kinase RIO2 OS=Mus musculus GN=Riok2 PE=1
SV=1
Length = 547
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 93 MVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVY---KTSVLVFKDRDRYV 149
+ L + +R V + + GKE+++Y GQ+LA+K++ +TS K++ Y
Sbjct: 83 LALKTLSSRQVVESVGNQMGVGKESDIYIVANEAGQQLALKLHRLGRTSFRNLKNKRDYH 142
Query: 150 QGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFI-GKA 208
+ + + Y + + A KE + L P P H ++ME I G
Sbjct: 143 KHRHNVSWLY-------LSRLSAMKEFAYMKALYERKFPVPKPIDYNRHAVIMELINGYP 195
Query: 209 GWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNI-LYFEGHLYIIDV 267
++D A D+ +E+I+ + L+HGD +E+N+ L + H+ +ID
Sbjct: 196 LCQIHHVEDPASVYDEA----MELIVKLGNH----GLIHGDFNEFNLMLDKDDHITMIDF 247
Query: 268 SQAVDLDHPHALDFLREDCVHVSDFFKK 295
Q V HP+A + D + +FF K
Sbjct: 248 PQMVSTSHPNAEWYFDRDVKCIREFFMK 275
>sp|O30245|RIO2_ARCFU RIO-type serine/threonine-protein kinase Rio2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=rio2 PE=1 SV=1
Length = 282
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 95 LFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYKTSVLVFKD-RDRYVQGDY 153
L +++ G I + GKE+ V++ E VK +K FK +++ GD
Sbjct: 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDL 141
Query: 154 RFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAP 213
F + A E R L +L+ G+ P Y + ++ME I
Sbjct: 142 HFSVLAIRS---------ARNEFRALQKLQ--GLAVPKVYAWEGNAVLMELIDAKELYRV 190
Query: 214 RLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDL 273
R+++ LD + E + Y R +VHGDLS+YN+L E ++IID Q+V++
Sbjct: 191 RVENPDEVLDMILE-------EVAKFYHRG-IVHGDLSQYNVLVSEEGIWIIDFPQSVEV 242
Query: 274 DHPHALDFLREDCVHVSDFFKK 295
+ L D ++ +F +
Sbjct: 243 GEEGWREILERDVRNIITYFSR 264
>sp|Q9P7W5|RIO2_SCHPO Serine/threonine-protein kinase rio2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rio2 PE=3 SV=2
Length = 344
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 93 MVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYKTSVLVFKDRDRYVQGD 152
+ L + R + + I GKE++VY G++ +K+++ + F R V+ +
Sbjct: 83 LALKALSKRASVYSVGNQIGVGKESDVYVVGDQKGKQYILKIHRLGRISF----RSVKNN 138
Query: 153 YRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGW-A 211
+ + + + + A KE + L G P P H ++ME I A
Sbjct: 139 RDYLRNRKTGSWQYLSRLAATKEFAFMKILHEHGFPVPAPIDHSRHCIIMEMIDAFPLRA 198
Query: 212 APRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFE-GHLYIIDVSQA 270
++D L M I +R + R L+HGD +E+NI+ E G +ID Q
Sbjct: 199 VTDIRDPPALYQTL------MDIIVR--FARNGLIHGDFNEFNIIVREDGTAVVIDFPQM 250
Query: 271 VDLDHPHALDFLREDCVHVSDFFKKH 296
V HP A + D + +F+K+
Sbjct: 251 VSTSHPDAQFYFDRDVQCIVQYFEKN 276
>sp|Q54T05|RIO2_DICDI Serine/threonine-protein kinase rio2 OS=Dictyostelium discoideum
GN=rio2 PE=3 SV=1
Length = 522
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 93 MVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYKTSVLVFK----DRDRY 148
+ L +++RGV + I GKE+++Y D QE+ +K+++ + FK +RD
Sbjct: 81 LALKTLVSRGVCSYVGNQIGVGKESDIYIVANDDNQEMVLKLHRLGRVSFKTIKNNRD-- 138
Query: 149 VQGDYRFRYGYCKHNPRK----MVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEF 204
Y KH + + A KE + L G PTP H +VM
Sbjct: 139 ----------YLKHRKSASWLYLSRLAALKEFAYMKALYENGFPVPTPIDYNRHCIVMS- 187
Query: 205 IGKAGWAAPRLKDAALS-LDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYF-EGHL 262
P + L K+ + +I+ + + L+HGD +E+NIL E +
Sbjct: 188 ---RARGYPLTQIVQLRHPSKVYSDLMNLIVKLASY----GLIHGDFNEFNILINDEEEI 240
Query: 263 YIIDVSQAVDLDHPHALDFLREDCVHVSDFFKK 295
+ID Q V H +A + D + FF+K
Sbjct: 241 TLIDFPQMVSTSHLNAEMYFDRDVTCIRVFFEK 273
>sp|Q3LFD5|UBP41_HUMAN Putative ubiquitin carboxyl-terminal hydrolase 41 OS=Homo sapiens
GN=USP41 PE=2 SV=2
Length = 358
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 36/90 (40%)
Query: 10 HGGLHSRTNASTLQPLSNRNQKFTNHIRPSPLEEWEGRMNVGMSNSVTTAIRESVRDMAI 69
H +H + PL R +K + R +PL VG+ N T S+ + +
Sbjct: 15 HPCVHVYVTVGLMDPLCERKEKASKQERENPLAHLAAWGLVGLHNIGQTCCLNSLIQVFV 74
Query: 70 GKTKTSEKADRATVEQAIDPRTRMVLFKML 99
+ R TV + D + R V F+ML
Sbjct: 75 MNVDFARILKRITVPRGADEQRRSVPFQML 104
>sp|P51805|PLXA3_HUMAN Plexin-A3 OS=Homo sapiens GN=PLXNA3 PE=1 SV=2
Length = 1871
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 149 VQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLV 201
++ D RF G+C R ++T N M L G RC P + ++H LV
Sbjct: 797 LKADPRFNCGWCISEHRCQLRTHCPAPKTNWMHLSQKGTRCSHPRITQIHPLV 849
>sp|P32944|SWE1_YEAST Mitosis inhibitor protein kinase SWE1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SWE1 PE=1 SV=1
Length = 819
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 230 VEMIIAMRTLYQRCKLVHGDLSEYNILY-FEGHLYIIDVSQAVDL 273
VE+ +A+R ++ C +VH DL N++ FEG+L + D A L
Sbjct: 560 VELSLALRFIHDSCHIVHLDLKPANVMITFEGNLKLGDFGMATHL 604
>sp|P27752|1A_CCMV Replication protein 1a OS=Cowpea chlorotic mottle virus GN=ORF1a
PE=2 SV=1
Length = 958
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 105/263 (39%), Gaps = 34/263 (12%)
Query: 57 TTAIRESVRDMAIGKTKTSEKADRATVEQAIDPR--TRMVLFKML---NRGVFHDINGCI 111
TTAI+ S ++A T+ K V +A+ P + + FK++ + + H + C
Sbjct: 689 TTAIK-SASNIAEHLVVTANKKSAEDVREALFPHNPSSEIAFKVIRTADSALMHGLPRCK 747
Query: 112 ST-GKEANVYHATKSDGQELAVKVYK--TSVLVFKDRDRYV----QGDYRFRYGYCKHNP 164
EA + H GQ LAV SVL F D ++ +R +YG + +
Sbjct: 748 RLLVDEAGLLHY----GQLLAVAALCKCQSVLAFGDTEQISFKSRDATFRLKYGDLQFDS 803
Query: 165 RKMV-KTW--AEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALS 221
R +V +TW + + + LK G R + H V I A+P LS
Sbjct: 804 RDIVTETWRCPQDVISAVQTLKRGGNRTSKYLGWKSHSKVSRSISHKEIASPL--QVTLS 861
Query: 222 LDKLREGYVEMIIAMRT-LYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALD 280
+K Y+ M A + L R K D E + + E H+ + +Q V +DH +
Sbjct: 862 REKF---YLTMTQADKAALVSRAK----DFPELDKAWIEKHIKTVHEAQGVSVDHAVLVR 914
Query: 281 FLREDCVHVSDFFKKHGVAVMTI 303
C D FK ++ +
Sbjct: 915 LKSTKC----DLFKTEEYCLVAL 933
>sp|Q54UL8|MPS1_DICDI Probable serine/threonine-protein kinase mps1 OS=Dictyostelium
discoideum GN=mps1 PE=3 SV=1
Length = 983
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 147 RYVQGD---YRFRYGYCKHNPRKMVKTWAEKEMR-------NLMRLKAAGIRCPTPYLLR 196
+ + GD Y +Y C +P ++ E EM N+++L + Y+L
Sbjct: 730 KVLSGDLKIYALKY-VCLSDPNEIEAQLNEIEMLKRLRKQVNIIQLIDYEVNMAKNYIL- 787
Query: 197 LHVLVMEFIGKAGWAA--PRLKDA-ALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEY 253
LV+EF G+ + RL+ +++ +R + +M+ A+ T+++ K++HGDL
Sbjct: 788 ---LVLEF-GEIDLSKLLQRLQTPNGTNVNFIRIYWQQMLQAVHTIHEE-KIIHGDLKPA 842
Query: 254 NILYFEGHLYIIDVSQAVDLDHPHALDFLREDCV 287
N + +G L +ID A + + +RE +
Sbjct: 843 NFVSVQGSLKLIDFGIAKAIQSDDTTNIVRESQI 876
>sp|Q2FS43|KAE1B_METHJ Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis
protein OS=Methanospirillum hungatei (strain JF-1 / DSM
864) GN=Mhun_2868 PE=3 SV=1
Length = 520
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 18/138 (13%)
Query: 165 RKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDK 224
R+++ E R + + AG+R P + ++ME I +LK+ LS +
Sbjct: 364 RRLIAERTRAEARLIAEARKAGVRTPIIREITQDTIIMEHIDGV-----KLKEC-LSPEL 417
Query: 225 LREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQA---VDLDH----PH 277
L E M ++VHGDL+ N L +G ++ID A D++H H
Sbjct: 418 LEE-----TGRMVGKLHAAQIVHGDLTTCNFLVHDGKTWLIDFGLAGTSSDIEHRGVDIH 472
Query: 278 ALDFLREDCVHVSDFFKK 295
L + E SD K+
Sbjct: 473 VLFQVLESTSKDSDILKE 490
>sp|O94547|SRK1_SCHPO Serine/threonine-protein kinase srk1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=srk1 PE=1 SV=1
Length = 580
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 111 ISTGKEANVYHATKS-DGQELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVK 169
+ G +NVY A + G+++A+KV + + RD R R G HN K V+
Sbjct: 130 MGDGAFSNVYKAIHNRTGEKVAIKVVQRAQPNTDPRDP------RKRQGVESHNILKEVQ 183
Query: 170 TWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGY 229
+ N+++L I+ P Y L VL + G+ RL S D R
Sbjct: 184 IMRRVKHPNIIQL-LEFIQTPEYYYL---VLELADGGELFHQIVRL--TYFSEDLSRHVI 237
Query: 230 VEMIIAMRTLYQRCKLVHGDLSEYNILY 257
++ A+R L++ C +VH D+ N+L+
Sbjct: 238 TQVAHAIRYLHEDCGVVHRDIKPENLLF 265
>sp|B8HQE1|DER_CYAP4 GTPase Der OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=der
PE=3 SV=1
Length = 453
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 114 GKEANVYHATKSDGQELAVKVYKTSVLVFKDRDR-YVQGDYRFRYGYCKHNPRKMVKTWA 172
G++ +Y+ T+ Q + ++ +FKD R Y++G +R + G+ + P +++ W
Sbjct: 380 GRQGKIYYGTQVSSQPPTIALFVNDPALFKDNYRKYIEGQFRKQLGF-RGTPIRLL--WR 436
Query: 173 EKEMRNLMR 181
K++R R
Sbjct: 437 GKKVREAER 445
>sp|Q83GK5|SYT_TROWT Threonine--tRNA ligase OS=Tropheryma whipplei (strain Twist)
GN=thrS PE=3 SV=1
Length = 640
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 267 VSQAVDLDHPHALDFLREDCVHV 289
V + ++LD PH LD LR C HV
Sbjct: 34 VPEPIELDSPHGLDILRHSCAHV 56
>sp|Q9SEZ7|CIPKG_ARATH CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis
thaliana GN=CIPK16 PE=1 SV=1
Length = 469
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 29/179 (16%)
Query: 90 RTRMVLFKMLNRGVFHDINGCISTGKEANVYHATK-SDGQELAVKVYKTSVLVFKDRDRY 148
R+ VLF N I + TG A VYH T+ S G ++A+KV K VFK R
Sbjct: 6 RSSTVLFDKYN------IGRLLGTGNFAKVYHGTEISTGDDVAIKVIKKD-HVFKRRGMM 58
Query: 149 VQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKA 208
Q + +P + E+R +M K + VME++
Sbjct: 59 EQIEREIAVMRLLRHPNVV-------ELREVMATK------------KKIFFVMEYVNGG 99
Query: 209 GWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILY-FEGHLYIID 266
+D L D R+ + ++I A+ + R + H D+ N+L EG L + D
Sbjct: 100 ELFEMIDRDGKLPEDLARKYFQQLISAVDFCHSR-GVFHRDIKPENLLLDGEGDLKVTD 157
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,744,883
Number of Sequences: 539616
Number of extensions: 4663223
Number of successful extensions: 11156
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 11098
Number of HSP's gapped (non-prelim): 33
length of query: 328
length of database: 191,569,459
effective HSP length: 118
effective length of query: 210
effective length of database: 127,894,771
effective search space: 26857901910
effective search space used: 26857901910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)