Query 020270
Match_columns 328
No_of_seqs 317 out of 2676
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 14:20:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.3E-30 4.4E-35 212.3 9.9 120 1-120 1-124 (169)
2 2xai_A ASB-9, ankyrin repeat a 100.0 7.9E-31 2.7E-35 228.5 9.1 189 3-203 2-193 (261)
3 1oy3_D Transcription factor in 100.0 1.2E-30 4.2E-35 228.9 6.1 191 2-203 7-252 (282)
4 2f8y_A Notch homolog 1, transl 100.0 9.6E-30 3.3E-34 215.9 10.2 192 2-204 23-219 (223)
5 3d9h_A CDNA FLJ77766, highly s 100.0 9.3E-30 3.2E-34 224.7 9.4 188 3-202 58-248 (285)
6 1yyh_A HN1;, notch 1, ankyrin 100.0 1.4E-29 4.8E-34 219.6 7.2 191 2-203 8-217 (253)
7 3kea_A K1L; tropism, ANK repea 100.0 7.8E-30 2.7E-34 225.2 5.7 189 2-204 29-223 (285)
8 3b7b_A Euchromatic histone-lys 100.0 3.6E-29 1.2E-33 214.3 9.2 191 2-203 9-204 (237)
9 1s70_B 130 kDa myosin-binding 100.0 2.7E-29 9.2E-34 222.6 8.5 199 3-203 39-259 (299)
10 2rfa_A Transient receptor pote 100.0 8.6E-30 3E-34 217.6 4.8 190 3-201 2-222 (232)
11 3utm_A Tankyrase-1; tankyrase, 100.0 4E-29 1.4E-33 225.8 8.6 189 3-202 57-306 (351)
12 3aji_A 26S proteasome non-ATPa 100.0 1.8E-29 6E-34 215.4 5.9 189 4-203 6-199 (231)
13 1k1a_A B-cell lymphoma 3-encod 100.0 6.9E-29 2.4E-33 212.8 8.9 190 2-202 7-209 (241)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 3.8E-29 1.3E-33 216.8 7.3 187 2-199 55-246 (253)
15 4g8k_A 2-5A-dependent ribonucl 100.0 5.5E-29 1.9E-33 224.7 8.3 198 3-202 24-299 (337)
16 3hra_A Ankyrin repeat family p 100.0 8.4E-29 2.9E-33 206.7 7.9 188 2-199 3-201 (201)
17 3ljn_A Hypothetical protein; a 100.0 3.9E-29 1.3E-33 228.0 5.6 186 3-201 19-236 (364)
18 1ikn_D Protein (I-kappa-B-alph 99.9 8E-30 2.7E-34 218.6 -0.1 194 2-206 6-214 (236)
19 1k1a_A B-cell lymphoma 3-encod 99.9 2.6E-28 8.8E-33 209.2 7.4 186 3-199 45-239 (241)
20 4b93_B Ankyrin repeat domain-c 99.9 9E-29 3.1E-33 216.6 4.6 190 3-203 10-212 (269)
21 1n11_A Ankyrin; clathrin, BAND 99.9 2.2E-28 7.6E-33 228.3 7.2 121 2-122 12-136 (437)
22 3aji_A 26S proteasome non-ATPa 99.9 6E-28 2E-32 205.9 8.5 188 2-200 38-229 (231)
23 2etb_A Transient receptor pote 99.9 3.5E-29 1.2E-33 217.2 0.6 189 4-200 2-245 (256)
24 2xai_A ASB-9, ankyrin repeat a 99.9 1.3E-27 4.5E-32 208.1 10.1 184 2-200 34-221 (261)
25 2dzn_A Probable 26S proteasome 99.9 4.2E-28 1.4E-32 206.3 6.8 189 4-203 2-202 (228)
26 1wdy_A 2-5A-dependent ribonucl 99.9 1.4E-27 4.8E-32 209.2 9.3 198 3-202 38-279 (285)
27 1wdy_A 2-5A-dependent ribonucl 99.9 3.3E-27 1.1E-31 206.8 11.2 199 3-203 4-213 (285)
28 4b93_B Ankyrin repeat domain-c 99.9 3.2E-28 1.1E-32 213.1 4.6 180 3-195 51-235 (269)
29 2fo1_E LIN-12 protein; beta-ba 99.9 4E-28 1.4E-32 222.4 5.3 189 3-201 165-371 (373)
30 3d9h_A CDNA FLJ77766, highly s 99.9 2.7E-27 9.2E-32 208.9 9.5 185 2-201 90-279 (285)
31 4gpm_A Engineered protein OR26 99.9 8.4E-27 2.9E-31 189.8 11.6 122 2-123 35-160 (169)
32 3kea_A K1L; tropism, ANK repea 99.9 4.9E-28 1.7E-32 213.7 4.0 181 3-201 61-246 (285)
33 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.4E-27 1.9E-31 190.7 9.7 119 3-121 13-135 (169)
34 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.4E-27 8.1E-32 191.1 6.5 120 2-122 3-126 (162)
35 3v31_A Ankyrin repeat family A 99.9 5.4E-27 1.8E-31 190.1 8.2 141 3-152 2-146 (167)
36 3b7b_A Euchromatic histone-lys 99.9 4.4E-27 1.5E-31 201.3 8.0 185 2-197 42-231 (237)
37 1oy3_D Transcription factor in 99.9 2.4E-27 8.3E-32 207.8 6.1 172 3-185 44-267 (282)
38 2vge_A RELA-associated inhibit 99.9 8.7E-28 3E-32 205.4 3.0 183 3-197 20-209 (229)
39 1n11_A Ankyrin; clathrin, BAND 99.9 4.6E-27 1.6E-31 219.4 7.7 198 3-202 145-370 (437)
40 3eu9_A Huntingtin-interacting 99.9 1.6E-26 5.4E-31 197.6 9.9 191 2-202 7-203 (240)
41 2fo1_E LIN-12 protein; beta-ba 99.9 6.1E-28 2.1E-32 221.1 1.1 198 3-203 124-340 (373)
42 3eu9_A Huntingtin-interacting 99.9 2.3E-26 7.9E-31 196.5 10.1 189 2-201 40-235 (240)
43 2pnn_A Transient receptor pote 99.9 8.1E-28 2.8E-32 210.6 0.7 194 2-201 11-258 (273)
44 2rfm_A Putative ankyrin repeat 99.9 4.6E-27 1.6E-31 195.0 5.2 119 2-120 33-155 (192)
45 2dzn_A Probable 26S proteasome 99.9 1.4E-26 4.7E-31 196.9 7.9 183 2-197 34-226 (228)
46 3utm_A Tankyrase-1; tankyrase, 99.9 2E-26 6.8E-31 208.0 9.4 197 3-203 23-274 (351)
47 3twr_A Tankyrase-2; ankyrin re 99.9 5.7E-26 2E-30 183.7 9.8 158 2-200 6-164 (165)
48 3v30_A DNA-binding protein rfx 99.9 2.5E-26 8.7E-31 187.1 7.3 141 4-153 2-147 (172)
49 3f6q_A Integrin-linked protein 99.9 7.1E-26 2.4E-30 185.8 9.7 161 3-203 4-165 (179)
50 4g8k_A 2-5A-dependent ribonucl 99.9 5.4E-26 1.9E-30 205.0 9.6 186 3-203 124-328 (337)
51 2jab_A H10-2-G3; HER2, darpin, 99.9 2.2E-25 7.5E-30 174.6 11.7 120 2-121 12-135 (136)
52 1awc_B Protein (GA binding pro 99.9 1.6E-25 5.5E-30 178.9 10.9 141 3-153 1-145 (153)
53 3orh_A Guanidinoacetate N-meth 99.9 5.2E-26 1.8E-30 195.1 7.6 191 128-323 32-235 (236)
54 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6E-25 2E-29 160.5 12.0 93 3-95 1-93 (93)
55 3jxi_A Vanilloid receptor-rela 99.9 3.2E-27 1.1E-31 205.2 -0.4 191 3-201 4-250 (260)
56 1s70_B 130 kDa myosin-binding 99.9 3.6E-26 1.2E-30 202.4 5.9 184 3-198 72-286 (299)
57 3hra_A Ankyrin repeat family p 99.9 1.5E-25 5.1E-30 186.9 9.2 146 2-156 37-193 (201)
58 2rfa_A Transient receptor pote 99.9 1.4E-25 4.9E-30 191.3 8.3 162 2-166 35-222 (232)
59 1d9s_A Cyclin-dependent kinase 99.9 1.1E-25 3.9E-30 176.2 6.2 120 2-122 10-134 (136)
60 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.7E-25 5.7E-30 179.1 7.1 139 3-152 1-144 (156)
61 3ljn_A Hypothetical protein; a 99.9 4.2E-26 1.4E-30 207.9 3.8 191 3-201 52-269 (364)
62 1bi7_B P16INK4A, MTS1, multipl 99.9 2.5E-25 8.6E-30 178.4 6.2 120 2-122 10-134 (156)
63 2etb_A Transient receptor pote 99.9 8.9E-26 3E-30 195.7 3.6 161 3-165 42-245 (256)
64 2f8y_A Notch homolog 1, transl 99.9 6.9E-25 2.4E-29 185.8 8.7 154 2-164 56-214 (223)
65 1awc_B Protein (GA binding pro 99.9 2E-24 6.9E-29 172.4 10.7 116 3-118 33-152 (153)
66 1sw6_A Regulatory protein SWI6 99.9 2.1E-25 7.2E-30 200.6 5.1 187 7-203 100-310 (327)
67 1ikn_D Protein (I-kappa-B-alph 99.9 1.1E-25 3.6E-30 192.8 2.8 154 3-165 44-208 (236)
68 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.4E-24 1.2E-28 164.7 10.5 120 3-122 1-124 (126)
69 3twr_A Tankyrase-2; ankyrin re 99.9 3.6E-24 1.2E-28 173.1 11.1 119 3-122 41-163 (165)
70 3aaa_C Myotrophin, protein V-1 99.9 2.6E-24 8.9E-29 165.4 9.6 105 3-107 6-114 (123)
71 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-24 4.7E-29 170.1 8.0 119 2-120 8-130 (137)
72 2y1l_E Darpin-8.4; hydrolase-i 99.9 6E-24 2.1E-28 172.6 11.6 120 2-121 45-168 (169)
73 4hbd_A KN motif and ankyrin re 99.9 8.2E-25 2.8E-29 192.1 6.7 157 3-199 110-273 (276)
74 3v30_A DNA-binding protein rfx 99.9 3.8E-24 1.3E-28 174.1 10.1 122 2-123 34-159 (172)
75 2pnn_A Transient receptor pote 99.9 2.4E-25 8.3E-30 194.8 3.0 161 3-165 53-257 (273)
76 3v31_A Ankyrin repeat family A 99.9 7.8E-24 2.7E-28 171.4 10.6 121 2-122 34-158 (167)
77 3deo_A Signal recognition part 99.9 8.9E-24 3E-28 174.0 10.8 95 3-98 43-138 (183)
78 2rfm_A Putative ankyrin repeat 99.9 1E-23 3.5E-28 174.7 10.7 120 3-122 67-190 (192)
79 3f6q_A Integrin-linked protein 99.9 7.8E-24 2.7E-28 173.5 9.1 121 3-123 38-162 (179)
80 4hbd_A KN motif and ankyrin re 99.9 1.5E-25 5.3E-30 196.8 -1.4 160 4-203 76-244 (276)
81 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.2E-23 7.4E-28 179.1 11.7 121 3-123 36-163 (239)
82 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.2E-23 4.1E-28 169.3 9.3 120 2-122 36-160 (162)
83 3ui2_A Signal recognition part 99.9 9E-24 3.1E-28 182.1 9.2 104 3-107 44-152 (244)
84 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.1E-23 7.2E-28 166.8 9.9 118 2-121 34-155 (156)
85 3t8k_A Uncharacterized protein 99.9 7E-24 2.4E-28 175.2 5.7 120 3-122 37-177 (186)
86 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-24 3.8E-29 187.2 0.8 117 3-120 4-124 (239)
87 1sw6_A Regulatory protein SWI6 99.9 1.4E-24 4.6E-29 195.4 0.9 177 2-185 129-325 (327)
88 3jxi_A Vanilloid receptor-rela 99.9 2.9E-23 9.9E-28 180.1 9.3 121 3-123 92-249 (260)
89 3ehr_A Osteoclast-stimulating 99.9 1.8E-23 6.3E-28 177.3 7.8 121 3-123 72-197 (222)
90 2vge_A RELA-associated inhibit 99.9 1.2E-24 4.2E-29 185.8 -1.3 142 2-153 52-200 (229)
91 2l6b_A NR1C; ankyrin, consensu 99.9 7.1E-23 2.4E-27 155.3 8.2 99 2-100 7-105 (115)
92 2b0o_E UPLC1; arfgap, structur 99.9 2.1E-22 7.1E-27 179.0 8.9 135 4-153 151-298 (301)
93 1d9s_A Cyclin-dependent kinase 99.9 3.1E-22 1.1E-26 156.5 7.3 93 2-95 43-136 (136)
94 3t8k_A Uncharacterized protein 99.9 5.6E-23 1.9E-27 169.8 3.1 105 4-110 6-126 (186)
95 2jab_A H10-2-G3; HER2, darpin, 99.9 2E-21 6.8E-26 151.9 11.7 91 3-93 46-136 (136)
96 3jue_A Arfgap with coiled-coil 99.9 1E-21 3.6E-26 178.7 11.1 119 4-122 199-324 (368)
97 2zgd_A 3 repeat synthetic anky 99.9 3.7E-21 1.3E-25 144.8 11.9 88 2-89 22-109 (110)
98 1bi7_B P16INK4A, MTS1, multipl 99.8 1E-21 3.5E-26 157.3 7.0 99 2-101 43-142 (156)
99 1n0r_A 4ANK, 4 ankyrin repeats 99.8 8.2E-21 2.8E-25 145.6 11.9 93 3-95 34-126 (126)
100 1dcq_A PYK2-associated protein 99.8 4.9E-21 1.7E-25 168.2 10.7 95 2-96 167-264 (278)
101 1dcq_A PYK2-associated protein 99.8 1.2E-20 4E-25 165.8 11.6 120 4-123 130-262 (278)
102 2aja_A Ankyrin repeat family p 99.8 5.3E-23 1.8E-27 187.8 -3.9 145 3-164 91-248 (376)
103 3lvq_E ARF-GAP with SH3 domain 99.8 7.2E-21 2.5E-25 180.6 10.1 120 4-123 132-264 (497)
104 2b0o_E UPLC1; arfgap, structur 99.8 5.8E-21 2E-25 169.6 8.2 107 3-111 189-298 (301)
105 3lvq_E ARF-GAP with SH3 domain 99.8 3.3E-20 1.1E-24 176.0 10.9 102 3-106 170-274 (497)
106 3c5r_A BARD-1, BRCA1-associate 99.8 1.9E-20 6.5E-25 146.4 6.5 117 27-153 1-121 (137)
107 3ui2_A Signal recognition part 99.8 6E-20 2E-24 158.1 7.3 93 3-95 76-185 (244)
108 3aaa_C Myotrophin, protein V-1 99.8 1E-19 3.5E-24 139.5 6.7 79 3-81 39-117 (123)
109 3ehr_A Osteoclast-stimulating 99.8 9.2E-20 3.1E-24 154.4 6.0 98 2-99 104-202 (222)
110 3jue_A Arfgap with coiled-coil 99.8 8.5E-19 2.9E-23 159.5 11.3 94 2-95 233-326 (368)
111 2aja_A Ankyrin repeat family p 99.8 9.8E-21 3.4E-25 172.8 -1.8 173 4-201 65-250 (376)
112 3deo_A Signal recognition part 99.8 8.2E-19 2.8E-23 144.1 9.4 84 2-85 74-158 (183)
113 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7E-19 2.4E-23 128.0 7.7 87 36-122 1-91 (93)
114 2l6b_A NR1C; ankyrin, consensu 99.7 1.2E-17 4.2E-22 126.2 5.4 91 32-122 4-98 (115)
115 2zgd_A 3 repeat synthetic anky 99.7 7.3E-17 2.5E-21 121.2 5.8 89 30-118 17-109 (110)
116 1zx0_A Guanidinoacetate N-meth 99.4 6.7E-13 2.3E-17 113.2 12.5 184 131-322 35-234 (236)
117 3vyw_A MNMC2; tRNA wobble urid 99.3 2.5E-12 8.7E-17 112.0 6.6 121 157-291 97-246 (308)
118 2qy6_A UPF0209 protein YFCK; s 99.1 3.3E-11 1.1E-15 103.7 5.2 118 157-289 61-231 (257)
119 3ujc_A Phosphoethanolamine N-m 98.5 7.7E-07 2.6E-11 76.4 12.1 136 155-291 54-205 (266)
120 3hnr_A Probable methyltransfer 98.5 3.1E-06 1.1E-10 70.5 15.5 133 155-292 44-200 (220)
121 3ps9_A TRNA 5-methylaminomethy 98.5 6E-08 2.1E-12 95.1 5.6 118 158-289 68-237 (676)
122 3jwg_A HEN1, methyltransferase 98.5 2.7E-06 9.3E-11 70.9 14.6 140 155-294 28-193 (219)
123 3ege_A Putative methyltransfer 98.5 4.6E-07 1.6E-11 78.0 10.0 147 155-313 33-195 (261)
124 3g5l_A Putative S-adenosylmeth 98.5 1.6E-06 5.4E-11 74.1 12.2 101 156-258 44-144 (253)
125 3l8d_A Methyltransferase; stru 98.4 3.9E-06 1.3E-10 71.0 13.7 138 154-294 51-202 (242)
126 1xxl_A YCGJ protein; structura 98.4 1.2E-06 4.1E-11 74.3 10.4 134 153-287 18-168 (239)
127 3e05_A Precorrin-6Y C5,15-meth 98.4 2.8E-06 9.4E-11 70.1 12.2 130 155-295 39-170 (204)
128 3kkz_A Uncharacterized protein 98.4 1.2E-06 4.2E-11 75.5 10.4 132 155-287 45-190 (267)
129 1nkv_A Hypothetical protein YJ 98.4 2.2E-07 7.5E-12 79.6 5.5 132 155-287 35-181 (256)
130 3sm3_A SAM-dependent methyltra 98.4 4.2E-06 1.4E-10 70.3 13.4 103 155-258 29-140 (235)
131 1vl5_A Unknown conserved prote 98.4 2.7E-06 9.4E-11 72.9 12.4 138 155-293 36-191 (260)
132 3jwh_A HEN1; methyltransferase 98.4 3.9E-06 1.3E-10 69.9 13.0 140 155-294 28-193 (217)
133 4htf_A S-adenosylmethionine-de 98.4 2.4E-06 8.1E-11 74.4 12.1 103 155-258 67-172 (285)
134 1vlm_A SAM-dependent methyltra 98.4 4.7E-06 1.6E-10 69.6 13.5 143 157-310 48-206 (219)
135 3h2b_A SAM-dependent methyltra 98.4 2.6E-06 9E-11 70.1 11.6 130 157-291 42-180 (203)
136 4fsd_A Arsenic methyltransfera 98.4 2.1E-06 7.1E-11 78.3 11.7 137 156-292 83-251 (383)
137 1xtp_A LMAJ004091AAA; SGPP, st 98.4 1.4E-06 4.9E-11 74.3 10.0 133 156-289 93-234 (254)
138 3dlc_A Putative S-adenosyl-L-m 98.4 1E-06 3.5E-11 73.2 8.8 105 158-262 45-151 (219)
139 3pvc_A TRNA 5-methylaminomethy 98.4 3.6E-07 1.2E-11 89.8 6.8 120 157-290 59-230 (689)
140 2p7i_A Hypothetical protein; p 98.4 4.7E-06 1.6E-10 70.6 12.8 99 156-259 42-141 (250)
141 3f4k_A Putative methyltransfer 98.4 2.2E-06 7.4E-11 73.3 10.5 133 156-289 46-192 (257)
142 3fpf_A Mtnas, putative unchara 98.3 5.6E-06 1.9E-10 72.0 12.5 142 154-309 120-280 (298)
143 2ex4_A Adrenal gland protein A 98.3 1.8E-06 6.2E-11 73.2 9.4 135 156-290 79-222 (241)
144 3dh0_A SAM dependent methyltra 98.3 1.3E-06 4.6E-11 72.7 8.4 138 154-291 35-180 (219)
145 3ou2_A SAM-dependent methyltra 98.3 5.8E-06 2E-10 68.6 11.4 100 155-259 45-146 (218)
146 3mgg_A Methyltransferase; NYSG 98.3 4.1E-06 1.4E-10 72.5 10.8 105 155-259 36-142 (276)
147 2yqz_A Hypothetical protein TT 98.3 9.7E-06 3.3E-10 69.4 13.1 103 155-258 38-140 (263)
148 3bwc_A Spermidine synthase; SA 98.3 5.7E-06 1.9E-10 72.9 11.7 137 155-295 94-243 (304)
149 3gu3_A Methyltransferase; alph 98.3 4.2E-06 1.4E-10 72.9 10.5 104 155-259 21-126 (284)
150 3bus_A REBM, methyltransferase 98.3 3.9E-06 1.3E-10 72.4 10.0 138 155-292 60-216 (273)
151 3hem_A Cyclopropane-fatty-acyl 98.3 9.7E-06 3.3E-10 71.2 12.7 105 155-262 71-186 (302)
152 1ve3_A Hypothetical protein PH 98.2 4.2E-06 1.4E-10 70.0 9.5 103 155-258 37-141 (227)
153 3lcc_A Putative methyl chlorid 98.2 8.3E-06 2.9E-10 68.8 11.3 136 157-294 67-209 (235)
154 3ccf_A Cyclopropane-fatty-acyl 98.2 9.4E-06 3.2E-10 70.4 11.9 98 155-258 56-153 (279)
155 2kw5_A SLR1183 protein; struct 98.2 2.1E-05 7.2E-10 64.5 13.2 100 159-259 32-131 (202)
156 3dtn_A Putative methyltransfer 98.2 1.1E-05 3.9E-10 67.8 11.7 105 155-261 43-150 (234)
157 3ocj_A Putative exported prote 98.2 5E-06 1.7E-10 73.2 9.8 105 154-259 116-227 (305)
158 2p35_A Trans-aconitate 2-methy 98.2 5.7E-06 2E-10 70.7 9.7 100 155-259 32-132 (259)
159 1kpg_A CFA synthase;, cyclopro 98.2 1.6E-05 5.3E-10 69.2 12.5 102 155-259 63-168 (287)
160 3e23_A Uncharacterized protein 98.2 4.9E-06 1.7E-10 68.9 8.8 127 155-288 42-177 (211)
161 2o57_A Putative sarcosine dime 98.2 6.1E-06 2.1E-10 72.2 9.7 133 155-287 81-228 (297)
162 3dli_A Methyltransferase; PSI- 98.2 2.2E-05 7.5E-10 66.4 12.8 126 155-288 40-179 (240)
163 3i9f_A Putative type 11 methyl 98.2 1.4E-05 4.8E-10 63.6 10.3 97 155-259 16-112 (170)
164 1fbn_A MJ fibrillarin homologu 98.1 2.7E-05 9.1E-10 65.5 12.4 127 156-287 74-207 (230)
165 3vc1_A Geranyl diphosphate 2-C 98.1 7.9E-06 2.7E-10 72.2 9.4 136 156-292 117-269 (312)
166 1xdz_A Methyltransferase GIDB; 98.1 1.2E-05 4.1E-10 68.1 10.0 130 156-295 70-205 (240)
167 1yzh_A TRNA (guanine-N(7)-)-me 98.1 1.4E-05 4.7E-10 66.4 10.2 130 155-293 40-182 (214)
168 3u81_A Catechol O-methyltransf 98.1 1.8E-05 6.3E-10 66.1 10.3 109 155-264 57-175 (221)
169 3cgg_A SAM-dependent methyltra 98.1 5.3E-05 1.8E-09 61.4 12.8 127 154-291 44-173 (195)
170 3e8s_A Putative SAM dependent 98.1 2.1E-05 7.1E-10 65.5 10.6 97 155-258 51-151 (227)
171 3m33_A Uncharacterized protein 98.1 1.8E-05 6E-10 66.4 10.0 115 153-287 45-161 (226)
172 2i62_A Nicotinamide N-methyltr 98.1 2.3E-05 7.8E-10 67.1 10.8 133 156-288 56-234 (265)
173 2fk8_A Methoxy mycolic acid sy 98.1 1.6E-05 5.3E-10 70.4 10.0 103 155-260 89-195 (318)
174 4hg2_A Methyltransferase type 98.1 1.4E-05 4.7E-10 68.6 9.3 97 155-258 38-134 (257)
175 3g2m_A PCZA361.24; SAM-depende 98.1 1.6E-05 5.5E-10 69.7 9.7 102 155-258 81-189 (299)
176 4gek_A TRNA (CMO5U34)-methyltr 98.1 7.3E-05 2.5E-09 64.2 13.4 108 153-262 67-181 (261)
177 3cc8_A Putative methyltransfer 98.1 4.6E-05 1.6E-09 63.5 12.0 133 155-294 31-187 (230)
178 1l3i_A Precorrin-6Y methyltran 98.0 1.6E-05 5.5E-10 64.3 8.7 128 155-294 32-161 (192)
179 2aot_A HMT, histamine N-methyl 98.0 3.7E-05 1.3E-09 67.1 11.5 138 156-293 52-221 (292)
180 3ggd_A SAM-dependent methyltra 98.0 4.8E-05 1.6E-09 64.4 11.7 102 155-259 55-163 (245)
181 1iy9_A Spermidine synthase; ro 98.0 8.6E-05 3E-09 64.3 13.3 135 155-295 74-221 (275)
182 3grz_A L11 mtase, ribosomal pr 98.0 1.6E-05 5.4E-10 65.5 8.2 122 154-288 58-180 (205)
183 3njr_A Precorrin-6Y methylase; 98.0 8.5E-05 2.9E-09 61.2 12.6 124 155-292 54-179 (204)
184 3g89_A Ribosomal RNA small sub 98.0 2.1E-05 7.1E-10 67.2 9.0 131 156-296 80-216 (249)
185 3mti_A RRNA methylase; SAM-dep 98.0 3.8E-05 1.3E-09 62.1 10.2 109 153-262 19-138 (185)
186 3g07_A 7SK snRNA methylphospha 98.0 4.1E-05 1.4E-09 66.9 10.8 103 156-258 46-219 (292)
187 3pfg_A N-methyltransferase; N, 98.0 6.3E-05 2.1E-09 64.4 11.8 98 155-258 49-150 (263)
188 1mjf_A Spermidine synthase; sp 98.0 7.3E-05 2.5E-09 64.9 12.2 136 155-296 74-226 (281)
189 3duw_A OMT, O-methyltransferas 98.0 0.00015 5.1E-09 60.4 13.6 106 155-263 57-171 (223)
190 3bxo_A N,N-dimethyltransferase 98.0 6.1E-05 2.1E-09 63.3 11.2 98 155-258 39-140 (239)
191 3dr5_A Putative O-methyltransf 98.0 8.9E-06 3E-10 68.2 5.8 101 159-262 59-166 (221)
192 3evz_A Methyltransferase; NYSG 98.0 3.9E-05 1.3E-09 64.3 9.8 133 153-292 52-205 (230)
193 3adn_A Spermidine synthase; am 97.9 0.00018 6E-09 62.9 13.7 138 155-296 82-231 (294)
194 3bkw_A MLL3908 protein, S-aden 97.9 4.4E-05 1.5E-09 64.4 9.6 101 156-258 43-143 (243)
195 2ld4_A Anamorsin; methyltransf 97.9 1.8E-05 6.2E-10 63.5 6.8 121 155-294 11-136 (176)
196 3tfw_A Putative O-methyltransf 97.9 8.8E-05 3E-09 63.1 11.4 106 155-263 62-174 (248)
197 3g5t_A Trans-aconitate 3-methy 97.9 3.1E-05 1.1E-09 67.8 8.6 102 155-257 35-147 (299)
198 2fca_A TRNA (guanine-N(7)-)-me 97.9 9.1E-05 3.1E-09 61.5 11.1 126 156-290 38-176 (213)
199 1pjz_A Thiopurine S-methyltran 97.9 3E-05 1E-09 63.9 7.7 137 155-294 21-178 (203)
200 4e2x_A TCAB9; kijanose, tetron 97.9 2.1E-05 7.3E-10 72.3 7.5 137 156-294 107-255 (416)
201 3ntv_A MW1564 protein; rossman 97.9 6.6E-05 2.3E-09 63.2 9.9 106 155-263 70-180 (232)
202 2gs9_A Hypothetical protein TT 97.9 3.8E-05 1.3E-09 63.4 8.2 96 155-258 35-131 (211)
203 2pt6_A Spermidine synthase; tr 97.9 0.00025 8.5E-09 62.8 13.9 137 155-295 115-262 (321)
204 2p8j_A S-adenosylmethionine-de 97.9 1.8E-05 6.2E-10 65.2 6.1 104 155-258 22-127 (209)
205 2a14_A Indolethylamine N-methy 97.9 3.1E-05 1.1E-09 66.6 7.7 137 156-292 55-238 (263)
206 2frn_A Hypothetical protein PH 97.9 2.9E-05 9.9E-10 67.4 7.6 132 154-292 123-256 (278)
207 2igt_A SAM dependent methyltra 97.9 8.5E-05 2.9E-09 66.1 10.6 137 156-296 153-307 (332)
208 2gb4_A Thiopurine S-methyltran 97.9 0.00033 1.1E-08 59.8 13.9 100 156-256 68-188 (252)
209 3gjy_A Spermidine synthase; AP 97.9 6E-05 2.1E-09 66.3 9.3 101 159-261 92-202 (317)
210 4df3_A Fibrillarin-like rRNA/T 97.8 0.0001 3.5E-09 62.0 10.3 125 155-287 76-211 (233)
211 3o4f_A Spermidine synthase; am 97.8 0.00026 8.9E-09 61.4 12.9 136 155-296 82-231 (294)
212 2nxc_A L11 mtase, ribosomal pr 97.8 6.2E-05 2.1E-09 64.4 9.0 122 154-288 118-239 (254)
213 3hm2_A Precorrin-6Y C5,15-meth 97.8 0.00034 1.2E-08 55.7 13.0 123 155-290 24-150 (178)
214 3eey_A Putative rRNA methylase 97.8 0.00013 4.5E-09 59.5 10.5 107 153-259 19-139 (197)
215 2pxx_A Uncharacterized protein 97.8 9.3E-05 3.2E-09 61.0 9.6 104 155-259 41-159 (215)
216 2b2c_A Spermidine synthase; be 97.8 0.00033 1.1E-08 61.8 13.4 134 155-294 107-253 (314)
217 1inl_A Spermidine synthase; be 97.8 0.00023 7.8E-09 62.3 12.3 137 155-295 89-237 (296)
218 2g72_A Phenylethanolamine N-me 97.8 0.0001 3.5E-09 64.1 10.1 139 156-294 71-258 (289)
219 1sui_A Caffeoyl-COA O-methyltr 97.8 3E-05 1E-09 66.1 6.2 105 155-262 78-193 (247)
220 3tr6_A O-methyltransferase; ce 97.8 5.1E-05 1.8E-09 63.3 7.4 105 155-262 63-177 (225)
221 2i7c_A Spermidine synthase; tr 97.8 0.00038 1.3E-08 60.4 12.9 137 155-295 77-224 (283)
222 3ofk_A Nodulation protein S; N 97.8 8.3E-05 2.8E-09 61.6 8.3 102 155-259 50-154 (216)
223 2yxd_A Probable cobalt-precorr 97.8 0.00024 8.3E-09 56.8 10.8 124 155-294 34-158 (183)
224 3c3y_A Pfomt, O-methyltransfer 97.7 3.5E-05 1.2E-09 65.2 5.9 106 155-263 69-185 (237)
225 3p9n_A Possible methyltransfer 97.7 9E-05 3.1E-09 60.1 8.2 104 155-258 43-152 (189)
226 1y8c_A S-adenosylmethionine-de 97.7 7E-05 2.4E-09 63.2 7.8 100 156-257 37-140 (246)
227 3i53_A O-methyltransferase; CO 97.7 0.00034 1.2E-08 62.1 12.6 128 157-287 170-315 (332)
228 2xvm_A Tellurite resistance pr 97.7 7.1E-05 2.4E-09 61.0 7.5 105 156-262 32-139 (199)
229 3q87_B N6 adenine specific DNA 97.7 0.0004 1.4E-08 55.3 11.8 114 155-289 22-145 (170)
230 3d2l_A SAM-dependent methyltra 97.7 8.9E-05 3E-09 62.5 8.4 100 155-257 32-135 (243)
231 3lpm_A Putative methyltransfer 97.7 0.00011 3.7E-09 63.0 8.8 125 156-289 49-197 (259)
232 1nt2_A Fibrillarin-like PRE-rR 97.7 0.00012 4E-09 60.7 8.7 101 155-258 56-160 (210)
233 3r3h_A O-methyltransferase, SA 97.7 1.3E-05 4.4E-10 68.2 2.7 103 155-262 59-173 (242)
234 3dmg_A Probable ribosomal RNA 97.7 4.4E-05 1.5E-09 69.3 6.2 102 156-258 233-339 (381)
235 1uir_A Polyamine aminopropyltr 97.7 0.0002 6.8E-09 63.2 10.1 136 155-294 76-227 (314)
236 2qfm_A Spermine synthase; sper 97.7 0.00029 9.8E-09 62.9 10.8 134 156-296 188-348 (364)
237 3mq2_A 16S rRNA methyltransfer 97.7 0.00024 8.2E-09 58.9 9.9 136 154-291 25-182 (218)
238 2ipx_A RRNA 2'-O-methyltransfe 97.7 0.00012 4.1E-09 61.5 8.0 131 155-289 76-213 (233)
239 1xj5_A Spermidine synthase 1; 97.7 0.00058 2E-08 60.7 12.8 104 155-258 119-234 (334)
240 3cbg_A O-methyltransferase; cy 97.6 7.2E-05 2.4E-09 63.0 6.0 103 156-263 72-186 (232)
241 3dp7_A SAM-dependent methyltra 97.6 0.00048 1.6E-08 62.0 11.8 108 155-263 178-291 (363)
242 2ift_A Putative methylase HI07 97.6 0.00011 3.6E-09 60.5 6.8 103 156-259 53-163 (201)
243 3thr_A Glycine N-methyltransfe 97.6 7.3E-05 2.5E-09 65.1 6.1 103 155-258 56-174 (293)
244 1ri5_A MRNA capping enzyme; me 97.6 0.00027 9.1E-09 61.5 9.6 105 154-258 62-173 (298)
245 3lst_A CALO1 methyltransferase 97.6 0.00034 1.2E-08 62.6 10.5 126 155-287 183-330 (348)
246 3m70_A Tellurite resistance pr 97.6 0.00017 5.7E-09 62.6 8.2 106 156-263 120-227 (286)
247 3c3p_A Methyltransferase; NP_9 97.6 0.0001 3.6E-09 60.8 6.5 103 156-262 56-163 (210)
248 2hnk_A SAM-dependent O-methylt 97.6 0.00024 8.1E-09 60.0 8.8 102 155-261 59-183 (239)
249 2zfu_A Nucleomethylin, cerebra 97.6 0.00018 6.3E-09 59.4 7.9 112 155-291 66-177 (215)
250 3gwz_A MMCR; methyltransferase 97.6 0.0013 4.3E-08 59.4 14.0 130 155-287 201-350 (369)
251 2avd_A Catechol-O-methyltransf 97.6 0.00021 7.1E-09 59.7 8.3 105 155-262 68-182 (229)
252 2o07_A Spermidine synthase; st 97.6 0.00044 1.5E-08 60.7 10.6 105 155-259 94-209 (304)
253 1dus_A MJ0882; hypothetical pr 97.6 0.0002 6.7E-09 57.9 7.7 103 156-260 52-158 (194)
254 2avn_A Ubiquinone/menaquinone 97.5 0.00034 1.2E-08 59.8 9.3 98 155-258 53-151 (260)
255 3dxy_A TRNA (guanine-N(7)-)-me 97.5 9E-05 3.1E-09 61.8 5.4 122 156-286 34-170 (218)
256 2qm3_A Predicted methyltransfe 97.5 0.0016 5.5E-08 58.8 14.1 124 156-288 172-304 (373)
257 3bzb_A Uncharacterized protein 97.5 0.00062 2.1E-08 59.0 10.9 129 156-288 79-232 (281)
258 1ixk_A Methyltransferase; open 97.5 0.001 3.5E-08 58.6 12.3 125 153-286 115-268 (315)
259 4dzr_A Protein-(glutamine-N5) 97.5 0.00015 5E-09 59.7 6.4 123 155-286 29-185 (215)
260 1wzn_A SAM-dependent methyltra 97.5 0.00024 8.1E-09 60.3 7.5 100 156-257 41-143 (252)
261 2cmg_A Spermidine synthase; tr 97.5 0.00062 2.1E-08 58.4 10.0 126 156-294 72-202 (262)
262 2gpy_A O-methyltransferase; st 97.5 0.00033 1.1E-08 58.7 8.1 104 155-261 53-162 (233)
263 3p2e_A 16S rRNA methylase; met 97.5 0.00045 1.5E-08 57.8 8.7 136 155-291 23-183 (225)
264 2pwy_A TRNA (adenine-N(1)-)-me 97.4 0.0008 2.7E-08 57.1 10.4 116 155-286 95-217 (258)
265 3uwp_A Histone-lysine N-methyl 97.4 0.00043 1.5E-08 62.7 8.8 147 154-311 171-331 (438)
266 3id6_C Fibrillarin-like rRNA/T 97.4 0.00068 2.3E-08 56.9 9.5 129 155-288 75-211 (232)
267 3htx_A HEN1; HEN1, small RNA m 97.4 0.0053 1.8E-07 60.3 16.7 102 155-257 720-832 (950)
268 2b3t_A Protein methyltransfera 97.4 0.0018 6.3E-08 55.7 12.5 122 155-286 108-256 (276)
269 3bkx_A SAM-dependent methyltra 97.4 0.00058 2E-08 58.7 9.2 105 155-259 42-159 (275)
270 2esr_A Methyltransferase; stru 97.4 0.00027 9.1E-09 56.5 6.6 104 156-260 31-139 (177)
271 3ckk_A TRNA (guanine-N(7)-)-me 97.4 0.00037 1.3E-08 58.8 7.7 121 155-284 45-185 (235)
272 4dmg_A Putative uncharacterize 97.4 0.00049 1.7E-08 62.6 8.8 134 155-292 213-356 (393)
273 3c0k_A UPF0064 protein YCCW; P 97.4 0.00069 2.4E-08 61.7 9.9 135 155-292 219-369 (396)
274 1x19_A CRTF-related protein; m 97.4 0.0016 5.4E-08 58.4 12.1 102 155-259 189-295 (359)
275 3ajd_A Putative methyltransfer 97.4 0.0021 7.3E-08 55.3 12.4 124 154-286 81-234 (274)
276 2bm8_A Cephalosporin hydroxyla 97.4 0.00044 1.5E-08 58.3 7.7 98 156-260 81-188 (236)
277 3a27_A TYW2, uncharacterized p 97.4 0.00029 1E-08 60.8 6.6 134 154-294 117-252 (272)
278 1yb2_A Hypothetical protein TA 97.4 0.00078 2.7E-08 58.1 9.3 118 155-286 109-230 (275)
279 2r3s_A Uncharacterized protein 97.3 0.0014 4.7E-08 58.1 11.0 130 155-286 164-316 (335)
280 4a6d_A Hydroxyindole O-methylt 97.3 0.003 1E-07 56.5 13.1 130 155-286 178-327 (353)
281 1jsx_A Glucose-inhibited divis 97.3 0.00042 1.4E-08 56.8 6.6 100 157-261 66-167 (207)
282 3p9c_A Caffeic acid O-methyltr 97.3 0.0025 8.7E-08 57.3 12.3 99 155-262 200-301 (364)
283 3iv6_A Putative Zn-dependent a 97.3 0.0018 6.1E-08 55.4 10.6 101 155-262 44-151 (261)
284 3k6r_A Putative transferase PH 97.3 0.0012 4.2E-08 56.9 9.6 133 154-293 123-257 (278)
285 1qzz_A RDMB, aclacinomycin-10- 97.3 0.0019 6.4E-08 58.2 11.3 134 155-291 181-338 (374)
286 2fpo_A Methylase YHHF; structu 97.3 0.00053 1.8E-08 56.3 7.0 103 156-259 54-160 (202)
287 3reo_A (ISO)eugenol O-methyltr 97.3 0.0024 8.3E-08 57.5 11.9 99 155-262 202-303 (368)
288 1fp2_A Isoflavone O-methyltran 97.3 0.0019 6.6E-08 57.7 11.0 128 155-291 187-340 (352)
289 3lbf_A Protein-L-isoaspartate 97.3 0.00076 2.6E-08 55.4 7.8 100 155-261 76-176 (210)
290 3mcz_A O-methyltransferase; ad 97.2 0.00087 3E-08 59.9 8.6 132 157-289 180-335 (352)
291 2ip2_A Probable phenazine-spec 97.2 0.0014 4.7E-08 58.2 9.8 127 158-287 169-316 (334)
292 1g8a_A Fibrillarin-like PRE-rR 97.2 0.0011 3.6E-08 55.3 8.6 100 156-258 73-177 (227)
293 2as0_A Hypothetical protein PH 97.2 0.001 3.6E-08 60.5 9.2 132 156-290 217-363 (396)
294 1tw3_A COMT, carminomycin 4-O- 97.2 0.0013 4.6E-08 58.9 9.7 135 155-292 182-339 (360)
295 1wxx_A TT1595, hypothetical pr 97.2 0.0011 3.6E-08 60.2 8.9 133 156-292 209-355 (382)
296 1ws6_A Methyltransferase; stru 97.2 0.00016 5.5E-09 57.2 3.0 101 156-260 41-148 (171)
297 3q7e_A Protein arginine N-meth 97.2 0.00046 1.6E-08 61.8 6.2 101 155-256 65-170 (349)
298 1vbf_A 231AA long hypothetical 97.2 0.0011 3.8E-08 55.3 8.2 100 155-262 69-168 (231)
299 1fp1_D Isoliquiritigenin 2'-O- 97.2 0.0014 4.9E-08 59.1 9.5 96 155-259 208-306 (372)
300 2fhp_A Methylase, putative; al 97.2 0.00032 1.1E-08 56.4 4.5 103 156-259 44-154 (187)
301 2ozv_A Hypothetical protein AT 97.2 0.0011 3.9E-08 56.6 8.2 105 156-260 36-171 (260)
302 1o54_A SAM-dependent O-methylt 97.2 0.0017 5.9E-08 55.9 9.4 118 155-286 111-232 (277)
303 3opn_A Putative hemolysin; str 97.1 0.0029 9.9E-08 53.1 10.2 129 156-291 37-182 (232)
304 2vdv_E TRNA (guanine-N(7)-)-me 97.1 0.003 1E-07 53.4 10.4 121 156-285 49-191 (246)
305 2fyt_A Protein arginine N-meth 97.1 0.00067 2.3E-08 60.5 6.5 99 155-256 63-168 (340)
306 2yvl_A TRMI protein, hypotheti 97.1 0.0013 4.4E-08 55.4 8.0 100 155-260 90-191 (248)
307 3sso_A Methyltransferase; macr 97.1 0.00052 1.8E-08 62.0 5.6 107 143-258 203-323 (419)
308 2qe6_A Uncharacterized protein 97.1 0.005 1.7E-07 53.0 11.6 106 156-262 77-199 (274)
309 3r0q_C Probable protein argini 97.1 0.0007 2.4E-08 61.3 5.9 102 155-258 62-168 (376)
310 2pjd_A Ribosomal RNA small sub 97.0 0.00013 4.4E-09 65.3 1.0 102 156-259 196-303 (343)
311 3v97_A Ribosomal RNA large sub 97.0 0.0014 4.7E-08 64.2 8.3 128 155-294 538-681 (703)
312 3bgv_A MRNA CAP guanine-N7 met 97.0 0.0014 4.7E-08 57.6 7.7 103 156-258 34-154 (313)
313 2b78_A Hypothetical protein SM 97.0 0.001 3.5E-08 60.4 6.4 129 155-286 211-355 (385)
314 1i9g_A Hypothetical protein RV 96.9 0.0028 9.6E-08 54.5 8.6 101 155-260 98-204 (280)
315 1wy7_A Hypothetical protein PH 96.9 0.017 5.6E-07 47.1 12.8 121 156-289 49-171 (207)
316 3hp7_A Hemolysin, putative; st 96.9 0.0022 7.6E-08 55.6 7.7 129 156-291 85-230 (291)
317 3kr9_A SAM-dependent methyltra 96.9 0.017 5.9E-07 48.0 12.8 127 155-293 14-143 (225)
318 1p91_A Ribosomal RNA large sub 96.9 0.0061 2.1E-07 52.0 10.5 94 155-259 84-178 (269)
319 3mb5_A SAM-dependent methyltra 96.9 0.003 1E-07 53.5 8.1 116 155-286 92-215 (255)
320 3fzg_A 16S rRNA methylase; met 96.9 0.0017 5.9E-08 52.4 6.0 132 154-288 47-183 (200)
321 2vdw_A Vaccinia virus capping 96.9 0.0015 5.2E-08 57.2 6.2 101 157-258 49-168 (302)
322 1u2z_A Histone-lysine N-methyl 96.9 0.0034 1.2E-07 57.6 8.7 109 155-265 241-365 (433)
323 3m6w_A RRNA methylase; rRNA me 96.8 0.004 1.4E-07 57.7 9.0 123 154-286 99-252 (464)
324 1ej0_A FTSJ; methyltransferase 96.8 0.0011 3.6E-08 52.5 4.4 95 155-259 21-136 (180)
325 1zg3_A Isoflavanone 4'-O-methy 96.8 0.021 7E-07 51.1 13.3 98 155-261 192-295 (358)
326 1i1n_A Protein-L-isoaspartate 96.8 0.00075 2.6E-08 56.2 3.3 100 155-260 76-183 (226)
327 2pbf_A Protein-L-isoaspartate 96.8 0.00056 1.9E-08 57.0 2.5 100 155-260 79-194 (227)
328 1g6q_1 HnRNP arginine N-methyl 96.7 0.0035 1.2E-07 55.5 7.8 101 155-256 37-142 (328)
329 2y1w_A Histone-arginine methyl 96.7 0.0025 8.5E-08 57.0 6.5 98 156-257 50-153 (348)
330 2yxl_A PH0851 protein, 450AA l 96.7 0.017 5.8E-07 53.4 12.3 125 154-287 257-413 (450)
331 3m4x_A NOL1/NOP2/SUN family pr 96.7 0.0044 1.5E-07 57.3 8.2 124 154-286 103-256 (456)
332 3gdh_A Trimethylguanosine synt 96.6 0.0015 5.2E-08 54.8 4.4 100 156-257 78-179 (241)
333 2yx1_A Hypothetical protein MJ 96.6 0.0052 1.8E-07 54.6 8.0 99 155-262 194-294 (336)
334 1r18_A Protein-L-isoaspartate( 96.6 0.00065 2.2E-08 56.7 1.9 101 155-261 83-196 (227)
335 2yxe_A Protein-L-isoaspartate 96.6 0.002 7E-08 53.0 4.8 102 155-262 76-180 (215)
336 1ne2_A Hypothetical protein TA 96.6 0.031 1.1E-06 45.2 12.0 114 156-289 51-166 (200)
337 2h00_A Methyltransferase 10 do 96.6 0.0007 2.4E-08 57.5 1.9 139 156-294 65-240 (254)
338 3lec_A NADB-rossmann superfami 96.6 0.068 2.3E-06 44.5 14.0 129 154-294 19-150 (230)
339 2frx_A Hypothetical protein YE 96.6 0.023 7.7E-07 53.0 12.2 122 156-286 117-268 (479)
340 3c6k_A Spermine synthase; sper 96.5 0.011 3.8E-07 52.9 9.2 132 156-294 205-363 (381)
341 2b25_A Hypothetical protein; s 96.5 0.0048 1.7E-07 54.7 6.9 102 154-260 103-220 (336)
342 1jg1_A PIMT;, protein-L-isoasp 96.5 0.0036 1.2E-07 52.4 5.7 102 155-262 90-192 (235)
343 3gnl_A Uncharacterized protein 96.4 0.061 2.1E-06 45.2 12.8 129 154-294 19-150 (244)
344 3tma_A Methyltransferase; thum 96.4 0.012 4.1E-07 52.6 9.0 122 155-289 202-335 (354)
345 1dl5_A Protein-L-isoaspartate 96.4 0.014 4.9E-07 51.2 9.4 101 155-261 74-177 (317)
346 3tm4_A TRNA (guanine N2-)-meth 96.2 0.027 9.3E-07 50.7 10.4 124 154-290 215-349 (373)
347 1nv8_A HEMK protein; class I a 96.2 0.035 1.2E-06 47.9 10.7 104 156-261 123-251 (284)
348 3b3j_A Histone-arginine methyl 96.1 0.0047 1.6E-07 57.7 4.9 100 156-257 158-261 (480)
349 2xyq_A Putative 2'-O-methyl tr 96.1 0.0082 2.8E-07 52.1 6.1 110 155-286 62-190 (290)
350 4dcm_A Ribosomal RNA large sub 96.1 0.01 3.6E-07 53.5 7.0 101 157-258 223-333 (375)
351 2plw_A Ribosomal RNA methyltra 96.1 0.016 5.4E-07 46.9 7.3 94 155-258 21-153 (201)
352 1sqg_A SUN protein, FMU protei 96.0 0.0084 2.9E-07 55.1 5.9 128 154-287 244-398 (429)
353 4hc4_A Protein arginine N-meth 96.0 0.021 7.1E-07 51.4 8.1 99 156-257 83-187 (376)
354 1o9g_A RRNA methyltransferase; 95.8 0.014 4.7E-07 49.3 6.2 102 156-257 51-212 (250)
355 3lcv_B Sisomicin-gentamicin re 95.8 0.023 7.8E-07 48.2 7.2 135 155-291 131-270 (281)
356 3dou_A Ribosomal RNA large sub 95.8 0.015 5E-07 47.1 5.9 99 154-263 23-143 (191)
357 3cvo_A Methyltransferase-like 95.6 0.16 5.6E-06 41.3 11.5 99 155-260 29-155 (202)
358 2nyu_A Putative ribosomal RNA 95.3 0.057 2E-06 43.3 7.8 96 155-260 21-146 (196)
359 3frh_A 16S rRNA methylase; met 95.3 0.029 1E-06 47.0 6.0 128 155-287 104-236 (253)
360 3axs_A Probable N(2),N(2)-dime 94.7 0.047 1.6E-06 49.4 6.3 100 156-259 52-158 (392)
361 2dul_A N(2),N(2)-dimethylguano 94.7 0.046 1.6E-06 49.3 6.2 100 156-259 47-164 (378)
362 2jjq_A Uncharacterized RNA met 94.4 0.19 6.6E-06 45.9 9.7 100 154-259 288-387 (425)
363 2ih2_A Modification methylase 94.4 0.063 2.2E-06 48.9 6.3 117 156-285 39-186 (421)
364 2wk1_A NOVP; transferase, O-me 94.3 0.3 1E-05 42.0 10.1 93 192-293 178-272 (282)
365 1af7_A Chemotaxis receptor met 94.1 0.077 2.6E-06 45.5 6.0 103 157-259 106-252 (274)
366 2wa2_A Non-structural protein 94.0 0.022 7.5E-07 49.0 2.3 100 153-257 79-191 (276)
367 1uwv_A 23S rRNA (uracil-5-)-me 93.7 0.78 2.7E-05 41.9 12.2 127 155-295 285-417 (433)
368 2p41_A Type II methyltransfera 93.6 0.047 1.6E-06 47.7 3.7 97 154-257 80-189 (305)
369 4gqb_A Protein arginine N-meth 93.6 0.23 7.8E-06 47.7 8.6 116 138-256 334-464 (637)
370 2oxt_A Nucleoside-2'-O-methylt 93.5 0.09 3.1E-06 44.8 5.2 101 152-257 70-183 (265)
371 2f8l_A Hypothetical protein LM 93.3 0.12 4.2E-06 45.7 6.1 122 156-286 130-279 (344)
372 1zq9_A Probable dimethyladenos 93.3 0.4 1.4E-05 41.2 9.1 78 155-236 27-106 (285)
373 3giw_A Protein of unknown func 93.1 0.57 1.9E-05 40.0 9.5 109 155-263 77-204 (277)
374 2b9e_A NOL1/NOP2/SUN domain fa 92.7 0.97 3.3E-05 39.3 10.8 121 153-283 99-253 (309)
375 1qam_A ERMC' methyltransferase 92.5 0.4 1.4E-05 40.1 7.8 61 156-218 30-90 (244)
376 4azs_A Methyltransferase WBDD; 92.1 0.27 9.1E-06 46.8 6.9 107 156-263 66-177 (569)
377 3ua3_A Protein arginine N-meth 92.1 0.5 1.7E-05 45.7 8.5 115 140-256 391-531 (745)
378 3bt7_A TRNA (uracil-5-)-methyl 91.9 0.22 7.5E-06 44.6 5.7 97 157-260 214-327 (369)
379 2h1r_A Dimethyladenosine trans 90.8 1.2 4E-05 38.5 9.2 78 155-236 41-119 (299)
380 3gru_A Dimethyladenosine trans 88.6 1.6 5.6E-05 37.6 8.2 79 155-236 49-127 (295)
381 1yub_A Ermam, rRNA methyltrans 87.9 0.042 1.4E-06 46.2 -2.3 102 155-259 28-145 (245)
382 2zig_A TTHA0409, putative modi 86.5 0.9 3.1E-05 39.2 5.4 83 205-287 21-130 (297)
383 3ll7_A Putative methyltransfer 86.4 1.4 4.7E-05 39.9 6.7 74 157-231 94-172 (410)
384 2km1_A Protein DRE2; yeast, an 85.3 0.93 3.2E-05 34.0 4.1 37 221-257 58-96 (136)
385 1m6y_A S-adenosyl-methyltransf 84.4 1.9 6.6E-05 37.2 6.4 76 155-230 25-106 (301)
386 3ldg_A Putative uncharacterize 84.2 8 0.00027 34.6 10.6 80 180-260 257-344 (384)
387 2okc_A Type I restriction enzy 83.9 0.89 3E-05 41.7 4.3 104 155-260 170-308 (445)
388 3ftd_A Dimethyladenosine trans 81.7 14 0.00047 30.7 10.5 59 155-216 30-88 (249)
389 3k0b_A Predicted N6-adenine-sp 81.3 6 0.00021 35.5 8.6 80 180-260 264-351 (393)
390 4fzv_A Putative methyltransfer 80.9 9.5 0.00033 33.7 9.6 118 146-263 138-289 (359)
391 1m6e_X S-adenosyl-L-methionnin 79.7 11 0.00037 33.4 9.5 23 236-258 186-208 (359)
392 2r6z_A UPF0341 protein in RSP 77.3 1.1 3.7E-05 37.8 2.3 75 156-231 83-170 (258)
393 3fut_A Dimethyladenosine trans 76.6 6.4 0.00022 33.3 6.9 72 155-230 46-118 (271)
394 3tqs_A Ribosomal RNA small sub 76.5 7.6 0.00026 32.5 7.3 60 155-216 28-87 (255)
395 3evf_A RNA-directed RNA polyme 76.0 4.2 0.00014 34.5 5.5 111 145-257 63-182 (277)
396 1boo_A Protein (N-4 cytosine-s 73.9 5.1 0.00017 34.9 5.7 83 205-287 14-114 (323)
397 3tos_A CALS11; methyltransfera 73.1 2.7 9.3E-05 35.4 3.6 55 203-259 157-217 (257)
398 1qyr_A KSGA, high level kasuga 69.1 13 0.00044 31.0 7.0 60 155-216 20-79 (252)
399 1wg8_A Predicted S-adenosylmet 67.9 19 0.00065 30.6 7.7 74 154-231 20-98 (285)
400 3ldu_A Putative methylase; str 66.9 11 0.00038 33.6 6.5 80 180-260 258-345 (385)
401 2oyr_A UPF0341 protein YHIQ; a 66.8 7.4 0.00025 32.7 5.0 73 158-231 90-173 (258)
402 3uzu_A Ribosomal RNA small sub 66.1 7.4 0.00025 33.1 4.9 59 155-216 41-102 (279)
403 1g60_A Adenine-specific methyl 64.6 14 0.00048 30.8 6.4 58 221-287 22-93 (260)
404 2oo3_A Protein involved in cat 64.3 31 0.0011 29.3 8.3 130 157-294 92-227 (283)
405 2ar0_A M.ecoki, type I restric 63.6 7 0.00024 36.7 4.7 122 141-262 151-315 (541)
406 1eg2_A Modification methylase 60.7 5.8 0.0002 34.5 3.3 40 221-260 57-107 (319)
407 3b5i_A S-adenosyl-L-methionine 57.3 8.5 0.00029 34.3 3.8 22 237-258 203-224 (374)
408 3lkd_A Type I restriction-modi 54.2 99 0.0034 28.9 10.8 125 156-285 221-381 (542)
409 3zrh_A Ubiquitin thioesterase 49.4 43 0.0015 30.0 6.8 22 11-32 29-50 (454)
410 3s1s_A Restriction endonucleas 47.1 77 0.0026 31.4 8.9 106 157-262 322-468 (878)
411 1gp8_A Protein (scaffolding pr 45.6 16 0.00055 20.5 2.3 19 6-24 15-33 (40)
412 1i4w_A Mitochondrial replicati 44.7 36 0.0012 29.9 5.8 55 157-213 59-114 (353)
413 3v97_A Ribosomal RNA large sub 43.4 72 0.0025 30.9 8.2 81 180-260 257-348 (703)
414 3zyw_A Glutaredoxin-3; metal b 34.2 67 0.0023 22.6 4.9 49 241-294 5-53 (111)
415 2wci_A Glutaredoxin-4; redox-a 29.2 70 0.0024 23.6 4.4 49 241-294 24-72 (135)
416 1wg8_A Predicted S-adenosylmet 28.4 21 0.00073 30.3 1.5 45 234-286 208-252 (285)
417 1aba_A Glutaredoxin; electron 28.4 45 0.0015 22.0 3.0 23 271-293 15-37 (87)
418 3m3m_A Glutathione S-transfera 28.4 70 0.0024 24.9 4.7 47 271-323 13-60 (210)
419 2wem_A Glutaredoxin-related pr 27.3 19 0.00064 26.1 0.8 23 271-294 36-58 (118)
420 3khk_A Type I restriction-modi 26.9 85 0.0029 29.3 5.5 117 142-261 228-397 (544)
421 3msz_A Glutaredoxin 1; alpha-b 26.8 46 0.0016 21.6 2.8 24 271-294 15-38 (89)
422 2coa_A Protein kinase C, D2 ty 26.8 15 0.0005 27.0 0.2 13 300-315 21-33 (125)
423 2yan_A Glutaredoxin-3; oxidore 26.7 1.2E+02 0.0043 20.6 5.3 47 243-294 8-54 (105)
424 3tka_A Ribosomal RNA small sub 26.7 23 0.00079 31.0 1.5 41 235-283 250-290 (347)
425 2lqo_A Putative glutaredoxin R 26.4 37 0.0013 23.2 2.2 22 271-294 15-36 (92)
426 2efj_A 3,7-dimethylxanthine me 26.4 40 0.0014 30.0 3.0 22 237-258 203-224 (384)
427 1cdo_A Alcohol dehydrogenase; 26.2 70 0.0024 27.9 4.6 102 155-262 191-297 (374)
428 3trk_A Nonstructural polyprote 25.6 48 0.0016 27.9 3.1 44 218-262 207-261 (324)
429 1m6y_A S-adenosyl-methyltransf 25.5 28 0.00096 29.8 1.8 41 234-282 220-260 (301)
430 3uko_A Alcohol dehydrogenase c 25.3 54 0.0019 28.7 3.7 103 154-262 191-298 (378)
431 1pl8_A Human sorbitol dehydrog 24.4 2.3E+02 0.0077 24.3 7.6 100 153-260 168-274 (356)
432 1e3i_A Alcohol dehydrogenase, 24.3 60 0.002 28.4 3.8 100 155-260 194-298 (376)
433 3m8n_A Possible glutathione S- 23.8 71 0.0024 25.3 3.9 48 271-323 13-60 (225)
434 2fgx_A Putative thioredoxin; N 23.3 48 0.0016 23.4 2.4 43 272-326 42-88 (107)
435 2k4m_A TR8_protein, UPF0146 pr 22.7 80 0.0027 24.0 3.6 75 155-243 34-111 (153)
436 2d9z_A Protein kinase C, NU ty 22.5 17 0.00057 26.8 -0.2 10 306-315 24-33 (129)
437 1iyc_A Scarabaecin; antifungal 21.0 34 0.0012 18.0 0.9 12 298-309 19-30 (36)
438 4a2c_A Galactitol-1-phosphate 20.8 1.5E+02 0.005 25.3 5.6 105 153-265 157-266 (346)
439 1gnw_A Glutathione S-transfera 20.8 1.1E+02 0.0038 23.6 4.4 46 271-322 12-58 (211)
440 2jhf_A Alcohol dehydrogenase E 20.7 93 0.0032 27.1 4.3 101 155-261 190-295 (374)
441 1r1f_A Palicourein; cyclotide, 20.0 25 0.00085 19.4 0.2 9 315-323 7-15 (37)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.3e-30 Score=212.34 Aligned_cols=120 Identities=38% Similarity=0.516 Sum_probs=106.1
Q ss_pred CcchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 1 MEKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 1 ~~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
|++-.++|+.||+.|+.++|+.||++|+|+|.+|..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..
T Consensus 1 ~sdlg~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 1 MSELGKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp -CHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHc
Confidence 56677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhh
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLED 120 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~ 120 (328)
|+.+++++|+++|++++..+. ||+.|+..++.+++++|++
T Consensus 81 g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 81 GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999876544 5555555555555555554
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=7.9e-31 Score=228.54 Aligned_cols=189 Identities=22% Similarity=0.192 Sum_probs=161.8
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
+|.||||.||..|+.++|++|+++|+++|.+|..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh---HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCCCc
Q 020270 83 QEVFEVLLNAGIQAELILG---TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGGH 159 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~---~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~ 159 (328)
.+++++|+++|++++.... |++.|+..++.+++++|++.+. +.+..+..+.||||.|+..+..+..+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~ 152 (261)
T 2xai_A 82 WDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGG---------NIDHKISHLGTPLYLACENQQRACVKK 152 (261)
T ss_dssp HHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC---------CCCcCCCCCCCHHHHHHHhCCHHHHHH
Confidence 9999999999999876544 9999999999999999998643 233344556799999988777666666
Q ss_pred eeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 160 ILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 160 iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
+++.|.+... ...+.+|+++++..++.++++.|++.|++..
T Consensus 153 Ll~~g~~~~~---~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 153 LLESGADVNQ---GKGQDSPLHAVARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp HHHHTCCTTC---CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHcCCCCCC---CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 7777766553 2255667666666699999999999997643
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=1.2e-30 Score=228.86 Aligned_cols=191 Identities=21% Similarity=0.097 Sum_probs=160.7
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCC---CcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGAD---VSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAM 78 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad---~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~ 78 (328)
++|.||||.||..|+.++|++||++|++ ++.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 86 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLAC 86 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 4689999999999999999999999988 7889999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCC-----------------------------------------------hhhhhh----HHHhhc
Q 020270 79 DSGHQEVFEVLLNAGIQ-----------------------------------------------AELILG----TIARAG 107 (328)
Q Consensus 79 ~~g~~~~v~~Ll~~g~~-----------------------------------------------~~~~~~----~l~~a~ 107 (328)
..|+.+++++|+++|++ ++..+. ||+.|+
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 166 (282)
T 1oy3_D 87 RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAV 166 (282)
T ss_dssp TTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHH
T ss_pred HcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHH
Confidence 99999999999998865 222222 999999
Q ss_pred cCCCCCcchhhhhcccccCCccccccchhhh-hhccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeec
Q 020270 108 NKNSNSNGDYLEDRVSFSEGKLVDSDSKAIM-MAWEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILE 186 (328)
Q Consensus 108 ~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~-~~~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e 186 (328)
..++.+++++|++.+. +.+... ..+.||||.|+..+..+..+.+++.|.+....+. .+.+|+++++..
T Consensus 167 ~~g~~~~v~~Ll~~g~---------~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~--~g~tpL~~A~~~ 235 (282)
T 1oy3_D 167 IHKDAEMVRLLRDAGA---------DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY--GGRTPLGSALLR 235 (282)
T ss_dssp HTTCHHHHHHHHHHTC---------CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHTS
T ss_pred HcCCHHHHHHHHHcCC---------CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc--CCCCHHHHHHHc
Confidence 9999999999998653 222222 2367999999888776666777777777666553 566777666666
Q ss_pred cCHHHHHHHHHcCCCCC
Q 020270 187 AHPEVYERMLRTGWGEK 203 (328)
Q Consensus 187 ~~~~~~~~L~~~g~~~~ 203 (328)
++.+++++|+++|++..
T Consensus 236 ~~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 236 PNPILARLLRAHGAPEP 252 (282)
T ss_dssp SCHHHHHHHHHTTCCCC
T ss_pred CCcHHHHHHHHcCCCcC
Confidence 99999999999998754
No 4
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=9.6e-30 Score=215.89 Aligned_cols=192 Identities=17% Similarity=0.118 Sum_probs=166.8
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCC-CCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGA-PWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga-~~n~~d~~g~tpL~~A~~~ 80 (328)
..|.||||.||..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 102 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 102 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHh
Confidence 367899999999999999999999999999999999999999999999999999999987 8999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcC
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSG 156 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~ 156 (328)
|+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+. +.+..+..+.||||.|+..+..+.
T Consensus 103 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~ 173 (223)
T 2f8y_A 103 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA---------NKDMQNNREETPLFLAAREGSYET 173 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred CcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCcCHHHHHHHcCCHHH
Confidence 999999999999999987765 9999999999999999998642 233344566799999998888776
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCC
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKN 204 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~ 204 (328)
.+.+++.|.+....+. .+.+|+++++..++.+++++|++.|+...+
T Consensus 174 v~~Ll~~ga~~~~~~~--~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 174 AKVLLDHFANRDITDH--MDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp HHHHHHTTCCTTCCCT--TCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred HHHHHHcCCCCccccc--cCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 7777888777665543 456676666666999999999999976544
No 5
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=9.3e-30 Score=224.74 Aligned_cols=188 Identities=22% Similarity=0.197 Sum_probs=161.9
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||.||..|+.++|++||++|+++|.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+
T Consensus 58 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~ 137 (285)
T 3d9h_A 58 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137 (285)
T ss_dssp CSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh---HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCCCc
Q 020270 83 QEVFEVLLNAGIQAELILG---TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGGH 159 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~---~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~ 159 (328)
.+++++|+++|++++.... ||+.|+..++.+++++|++.+. +.+..+..+.||||.|+..+..+..+.
T Consensus 138 ~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~---------~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 138 WDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGG---------NIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTC---------CTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC---------CCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 9999999999999875544 9999999999999999998543 233344556799999988777666666
Q ss_pred eeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC
Q 020270 160 ILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE 202 (328)
Q Consensus 160 iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~ 202 (328)
+++.|.+... ...+.+|+++++..++.+++++|++.|++.
T Consensus 209 Ll~~ga~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 248 (285)
T 3d9h_A 209 LLESGADVNQ---GKGQDSPLHAVVRTASEELACLLMDFGADT 248 (285)
T ss_dssp HHHTTCCTTC---CBTTBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 7776665542 224566766666669999999999998764
No 6
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=1.4e-29 Score=219.56 Aligned_cols=191 Identities=19% Similarity=0.140 Sum_probs=133.8
Q ss_pred cchhHHHHHHHHcC-------------CHHHHHHHHhCCCCCcc-cCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccC
Q 020270 2 EKEGEQLCEAARNG-------------DIDKVKALIGSGADVSY-FDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALS 67 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g-------------~~~~v~~LL~~gad~n~-~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d 67 (328)
++|.||||.|+..| +.++++.|+++|++++. .|..|.||||+|+..|+.++|++|+++|++++.+|
T Consensus 8 ~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 87 (253)
T 1yyh_A 8 PDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD 87 (253)
T ss_dssp --------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 46899999999987 89999999999999865 48899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCC-Chhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhcc
Q 020270 68 SSNLSAGDFAMDSGHQEVFEVLLNAGI-QAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWE 142 (328)
Q Consensus 68 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~-~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~ 142 (328)
..|.||||+|+..|+.+++++|+++|+ +++..+. ||+.|+..++.+++++|++.+. +.+..+..+.
T Consensus 88 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~d~~g~ 158 (253)
T 1yyh_A 88 NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA---------DVNAVDDLGK 158 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTC---------CTTCBCTTSC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCC---------CCCCcCCCCC
Confidence 999999999999999999999999987 6766554 9999999999999999998542 2333445567
Q ss_pred chHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 143 KPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 143 tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
||||.|+..+..+..+.+++.|.+....+. .+.+|+++++..++.+++++|++.|++..
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~--~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKNGANKDMQNN--REETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 999999988877766777777777665542 45666666656699999999999997643
No 7
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=7.8e-30 Score=225.24 Aligned_cols=189 Identities=15% Similarity=0.119 Sum_probs=161.2
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||+||..|+.++|++|+++|++++..| |.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|
T Consensus 29 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g 106 (285)
T 3kea_A 29 VHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSG 106 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcC
Confidence 368899999999999999999999999999884 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh-----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcC
Q 020270 82 HQEVFEVLLNAGIQAELILG-----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSG 156 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~-----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~ 156 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+... .+. ..+.||||.|+..+..+.
T Consensus 107 ~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~------~~g~t~L~~A~~~g~~~~ 176 (285)
T 3kea_A 107 NMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST----FDL------AILLSCIHITIKNGHVDM 176 (285)
T ss_dssp CHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT----CCC------STHHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc----ccc------cCCccHHHHHHHcChHHH
Confidence 99999999999999987653 999999999999999999865321 111 145699999988887776
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeec-cCHHHHHHHHHcCCCCCC
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILE-AHPEVYERMLRTGWGEKN 204 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e-~~~~~~~~L~~~g~~~~~ 204 (328)
...+++.|.+....+. .+.+|++|.|+. ++.+++++|+++|++...
T Consensus 177 v~~Ll~~gad~n~~~~--~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 177 MILLLDYMTSTNTNNS--LLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp HHHHHHHHHHTCTTCC--CBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred HHHHHHcCCCCCcccC--CCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 6777877777665443 566774555555 999999999999987543
No 8
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=3.6e-29 Score=214.31 Aligned_cols=191 Identities=22% Similarity=0.194 Sum_probs=163.5
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
++|.||||.||..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 9 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 9 QNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp CCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcC-CChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcC
Q 020270 82 HQEVFEVLLNAG-IQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSG 156 (328)
Q Consensus 82 ~~~~v~~Ll~~g-~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~ 156 (328)
+.+++++|++.| ++++..+. |++.|+..++.+++++|++.+. +.+..+..+.||||.|+..+..+.
T Consensus 89 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGS---------DINIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp CHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred CHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC---------CCCccCCCCCCHHHHHHHCCCHHH
Confidence 999999999998 77776554 9999999999999999998643 223334456799999988877666
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
...+++.|.+....+. .+.+|+++++..++.+++++|++.|++..
T Consensus 160 ~~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 160 AEILLAAKCDLHAVNI--HGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HHHHHTTTCCTTCCCT--TCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHcCCCCCCcCC--CCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 6667777766555442 45667666666699999999999997643
No 9
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=2.7e-29 Score=222.56 Aligned_cols=199 Identities=19% Similarity=0.220 Sum_probs=162.3
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.+.||||.||..|+.++|++||++|+++|..|..|.||||+|+..|+.++|++|+++|+++|..|..|.||||+|+..|+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCc---------------ccc---ccchhhhhh
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGK---------------LVD---SDSKAIMMA 140 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~---------------l~~---~~~~~~~~~ 140 (328)
.+++++|+++|++++..+. |++.|+..++.+.+++++......... ++. ......+..
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 198 (299)
T 1s70_B 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198 (299)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTT
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCC
Confidence 9999999999999987765 999999888877777766543221000 000 000112245
Q ss_pred ccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 141 WEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 141 ~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
+.||||.|+..+..+....+++.|.+....+. .+.+|+++++..++.++++.|++.|++..
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~--~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDY--DGWTPLHAAAHWGKEEACRILVENLCDME 259 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT--TCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC--CCCcHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 67999999998887766777777777665543 56677766666699999999999997643
No 10
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=8.6e-30 Score=217.59 Aligned_cols=190 Identities=17% Similarity=0.105 Sum_probs=155.5
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-----CccCCCCCCHHHH
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGS-GADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPW-----NALSSSNLSAGDF 76 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~-gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~-----n~~d~~g~tpL~~ 76 (328)
.|.||||.|+..|+.++|+.||++ |++++.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 478999999999999999999997 9999999999999999999999999999999999987 6778899999999
Q ss_pred HHHcCCHHHHHHHHHcCCChhhhh---------------h--HHHhhccCCCCCcchhhhhcccccCCccccccchhhhh
Q 020270 77 AMDSGHQEVFEVLLNAGIQAELIL---------------G--TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMM 139 (328)
Q Consensus 77 A~~~g~~~~v~~Ll~~g~~~~~~~---------------~--~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~ 139 (328)
|+..|+.+++++|+++|++++..+ + ||+.|+..++.+++++|++.+. +.+..+.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---------~~~~~d~ 152 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA---------DIRAQDS 152 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCT
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC---------CCCCCCC
Confidence 999999999999999999988753 2 9999999999999999998642 3344455
Q ss_pred hccchHHHHHHHHhhcCC----CceeeecccCCc----chhHHhccCCceEEeeccCHHHHHHHHHcCCC
Q 020270 140 AWEKPLMEAHAKAICSGG----GHILNIGFGMGL----VDTAIQQYSPVTHTILEAHPEVYERMLRTGWG 201 (328)
Q Consensus 140 ~~~tpL~~a~~~~~~~~~----~~iLe~g~~~g~----~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~ 201 (328)
.|.||||.|+..+..+.. ..+++.|.+... ......+.+|+++++..++.+++++|+++|..
T Consensus 153 ~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 153 LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 677999999766554433 334455544321 01122456676666666999999999998854
No 11
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=4e-29 Score=225.79 Aligned_cols=189 Identities=23% Similarity=0.246 Sum_probs=130.9
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||+||..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 57 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 57 RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR 136 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 46678888888888888888888887777777778888888888888888888888888877777777888888888888
Q ss_pred HHHHHHHHHcCCChhhhhh----------------------------------------------------------HHH
Q 020270 83 QEVFEVLLNAGIQAELILG----------------------------------------------------------TIA 104 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----------------------------------------------------------~l~ 104 (328)
.+++++|+++|++++..+. |++
T Consensus 137 ~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~ 216 (351)
T 3utm_A 137 VEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALH 216 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHH
T ss_pred HHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHH
Confidence 8888888877777654321 444
Q ss_pred hhccCCC---CCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCce
Q 020270 105 RAGNKNS---NSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVT 181 (328)
Q Consensus 105 ~a~~~~~---~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~ 181 (328)
.|+..++ .+++++|+..+ .+.+..+..+.||||.|+..+..+..+.+++.|.+....+. .+.+|++
T Consensus 217 ~A~~~~~~~~~~~~~~Ll~~g---------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~--~g~t~L~ 285 (351)
T 3utm_A 217 CAVASLHPKRKQVAELLLRKG---------ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDS--LGQTALH 285 (351)
T ss_dssp HHHHCCSTTHHHHHHHHHHTT---------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TSCCHHH
T ss_pred HHHHHhCccHHHHHHHHHHcC---------CCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC--CCCCHHH
Confidence 4444422 23444444322 12334445667899998877776666666777666655442 4566666
Q ss_pred EEeeccCHHHHHHHHHcCCCC
Q 020270 182 HTILEAHPEVYERMLRTGWGE 202 (328)
Q Consensus 182 ~~a~e~~~~~~~~L~~~g~~~ 202 (328)
+++..++.+++++|++.|++.
T Consensus 286 ~A~~~~~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 286 RAALAGHLQTCRLLLSYGSDP 306 (351)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHcCcHHHHHHHHHcCCCC
Confidence 655568999999999988653
No 12
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.8e-29 Score=215.40 Aligned_cols=189 Identities=22% Similarity=0.214 Sum_probs=144.9
Q ss_pred hhHHHHHHHHcCCHHHHHHHHhCCC-CCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 4 EGEQLCEAARNGDIDKVKALIGSGA-DVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~~v~~LL~~ga-d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
+.||||.|+..|+.+.++.|++.+. .++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 5788888888888888888888654 367778888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCCC
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGG 158 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~ 158 (328)
.+++++|+++|++++..+. ||+.|+..++.+.+++|++.+. +.+..+..+.||||.|+..+..+...
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA---------NPDAKDHYDATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 8888888888888876654 8888888888888888887542 22223344568888888777666666
Q ss_pred ceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 159 HILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 159 ~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
.+++.|.+....+. .+.+|+++++..++.+++++|++.|++..
T Consensus 157 ~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 157 ILLFYKASTNIQDT--EGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHHHTTCCSCCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHhcCCCccccCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 66666666555442 45566655555588888888888887643
No 13
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=6.9e-29 Score=212.83 Aligned_cols=190 Identities=20% Similarity=0.198 Sum_probs=160.9
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHh----CCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHH
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIG----SGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFA 77 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~----~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A 77 (328)
++|.||||.||..|+.++|+.|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 86 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA 86 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 468999999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCC----Chhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhh-hhccchHHHH
Q 020270 78 MDSGHQEVFEVLLNAGI----QAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIM-MAWEKPLMEA 148 (328)
Q Consensus 78 ~~~g~~~~v~~Ll~~g~----~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~-~~~~tpL~~a 148 (328)
+..|+.+++++|++.++ +++..+. |++.|+..++.+.+++|++.+. +.+... ..+.||||.|
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGA---------DIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTTCCCHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCC---------CcccccccCCCcHHHHH
Confidence 99999999999999987 5555443 9999999999999999998653 112222 3467999999
Q ss_pred HHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC
Q 020270 149 HAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE 202 (328)
Q Consensus 149 ~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~ 202 (328)
+..+..+..+.+++.|.+....+. .+.+|+++++..++.++++.|++.|++.
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQMY--SGSSALHSASGRGLLPLVRTLVRSGADS 209 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCBCT--TSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCC--CCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 888776666677777776655442 4556666666669999999999999764
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=3.8e-29 Score=216.82 Aligned_cols=187 Identities=18% Similarity=0.124 Sum_probs=162.9
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCC-CCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGA-PWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga-~~n~~d~~g~tpL~~A~~~ 80 (328)
..|.||||+||..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..
T Consensus 55 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 134 (253)
T 1yyh_A 55 RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 134 (253)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHc
Confidence 367899999999999999999999999999999999999999999999999999999987 9999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcC
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSG 156 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~ 156 (328)
|+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+. +.+..+..+.||||.|+..+..+.
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga---------~~~~~~~~g~tpL~~A~~~~~~~~ 205 (253)
T 1yyh_A 135 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA---------NKDMQNNREETPLFLAAREGSYET 205 (253)
T ss_dssp TCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred ChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999988775 9999999999999999998643 233444566799999998888777
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG 199 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g 199 (328)
.+.+++.|.+..+.+. .+.+|+++++..++.+++++|....
T Consensus 206 v~~Ll~~ga~~~~~d~--~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 206 AKVLLDHFANRDITDH--MDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHHHHHTTCCTTCCCT--TCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HHHHHHcCCCcccccc--CCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 7778888877766553 5667766666669999999998743
No 15
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=5.5e-29 Score=224.65 Aligned_cols=198 Identities=21% Similarity=0.233 Sum_probs=154.6
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCcHHHHHHHhCcHHHHHHHHHcCCCCC-----------------
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDS-DGLTPLMHAAKLGHANLVKTLLEAGAPWN----------------- 64 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n----------------- 64 (328)
++.|+||.|++.|++++|++||++|+|+|.++. .|+||||+|+..|+.++|++|+++|++++
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 478999999999999999999999999999886 49999999999999999999999998754
Q ss_pred ----------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhh--------------HHHhhccCCCCCc
Q 020270 65 ----------------ALSSSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILG--------------TIARAGNKNSNSN 114 (328)
Q Consensus 65 ----------------~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~--------------~l~~a~~~~~~~~ 114 (328)
..|..|.||||+|+..|+.+++++|+++|++++.... ||+.|+..++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~ 183 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 183 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHH
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHH
Confidence 4567789999999999999999999999998875421 8999999999999
Q ss_pred chhhhhccccc----CC-----------------------cccc--ccchhhhhhccchHHHHHHHHhhcCCCceeee-c
Q 020270 115 GDYLEDRVSFS----EG-----------------------KLVD--SDSKAIMMAWEKPLMEAHAKAICSGGGHILNI-G 164 (328)
Q Consensus 115 ~~~L~~~~~~~----~~-----------------------~l~~--~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe~-g 164 (328)
+++|+.+.... +. .+++ .+.+..+..|.||||.|+..+..+....+++. |
T Consensus 184 v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~ 263 (337)
T 4g8k_A 184 LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 263 (337)
T ss_dssp HHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTT
T ss_pred HHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcC
Confidence 99998642110 00 0111 13344556788999999877665555555543 4
Q ss_pred ccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC
Q 020270 165 FGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE 202 (328)
Q Consensus 165 ~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~ 202 (328)
......+. .+.+|+++++..++.+++++|+++|++.
T Consensus 264 ~~vn~~d~--~G~TpL~~A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 264 IEINDTDS--DGKTALLLAVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp CCTTCBCT--TSCBHHHHHHHTTCHHHHHHHHTTSCSS
T ss_pred CcccCcCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 55444442 4556666555559999999999999764
No 16
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=8.4e-29 Score=206.67 Aligned_cols=188 Identities=21% Similarity=0.146 Sum_probs=156.7
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCC-CCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGA-DVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~ga-d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
+.+.||||.||..|+.+.|+.||.++. ++|..|..|.||||+|+..|+.++|++|+++|++++..|..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 357899999999999999999999876 9999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHH-HcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHh--
Q 020270 81 GHQEVFEVLL-NAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI-- 153 (328)
Q Consensus 81 g~~~~v~~Ll-~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~-- 153 (328)
|+.+++++|+ ..+++++..+. ||+.|+..++.+++++|++.+.. +.+..+..+.||||.|+..+.
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------~~~~~~~~g~t~L~~A~~~~~~~ 154 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRE--------DIDFQNDFGYTALIEAVGLREGN 154 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCC--------CTTCCCTTSCCHHHHHHHSSCCS
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC--------CcCCCCCCCCCHHHHHHHhccch
Confidence 9999999999 56667776665 99999999999999999986522 233344556799999975443
Q ss_pred ---hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC
Q 020270 154 ---CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG 199 (328)
Q Consensus 154 ---~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g 199 (328)
.+..+.+++.|.+....+. .+.+|+++++..++.+++++|++.|
T Consensus 155 ~~~~~~v~~Ll~~ga~~~~~~~--~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 155 QLYQDIVKLLMENGADQSIKDN--SGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hhHHHHHHHHHHCCCCCCccCC--CCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 3334556677766655443 4566666666669999999999876
No 17
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=3.9e-29 Score=227.99 Aligned_cols=186 Identities=20% Similarity=0.164 Sum_probs=127.6
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
+|.||||+||..|+.++|++||++|+++|.+|..|.||||+|+..|+.++|++|+++|++++. ..|.||||+|+..|+
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~ 96 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANK 96 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCC
Confidence 589999999999999999999999999999999999999999999999999999999997765 356677777777777
Q ss_pred HHHHHHHHHc----CCChhh-----------------hhh----HHHhhccCC--CCCcchhhhhcccccCCccccccch
Q 020270 83 QEVFEVLLNA----GIQAEL-----------------ILG----TIARAGNKN--SNSNGDYLEDRVSFSEGKLVDSDSK 135 (328)
Q Consensus 83 ~~~v~~Ll~~----g~~~~~-----------------~~~----~l~~a~~~~--~~~~~~~L~~~~~~~~~~l~~~~~~ 135 (328)
.+++++|+++ |++++. .+. ||+.|+..+ +.+++++|++.+. +.+
T Consensus 97 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga---------~~~ 167 (364)
T 3ljn_A 97 TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA---------SPT 167 (364)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC---------CTT
T ss_pred HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC---------CCc
Confidence 7777777766 666554 222 666666666 6666666666432 122
Q ss_pred hhhhhccchHHHHHHHHhhcCCCceeeeccc-----CCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC
Q 020270 136 AIMMAWEKPLMEAHAKAICSGGGHILNIGFG-----MGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG 201 (328)
Q Consensus 136 ~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~-----~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~ 201 (328)
..+..+.||||.|+..+..+....+++.|.+ ....+. .+.+|+++++..++.+++++|++.|++
T Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~gad 236 (364)
T 3ljn_A 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK--QGNSHLHWAILINWEDVAMRFVEMGID 236 (364)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT--TCCCTTHHHHTTTCHHHHHHHHTTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC--CCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 2233344666666555555555555555554 222221 334444444444566666666655554
No 18
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=8e-30 Score=218.55 Aligned_cols=194 Identities=15% Similarity=0.032 Sum_probs=160.0
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCC----CCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHH
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGA----DVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFA 77 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~ga----d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A 77 (328)
++|.||||.|+..|+.++++.|++.++ ++|.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 85 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA 85 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHH
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 468999999999999999999998765 7999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCh------hhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhh-hccchHH
Q 020270 78 MDSGHQEVFEVLLNAGIQA------ELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMM-AWEKPLM 146 (328)
Q Consensus 78 ~~~g~~~~v~~Ll~~g~~~------~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~-~~~tpL~ 146 (328)
+..|+.+++++|+++|++. +..+. ||+.|+..++.+++++|++.+. +.+..+. .+.||||
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 86 CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA---------DVNAQEPCNGRTALH 156 (236)
T ss_dssp HHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC---------CTTCCCTTTCCCHHH
T ss_pred HHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------CCCCCCCCCCCCHHH
Confidence 9999999999999999763 22222 9999999999999999998653 2222333 5679999
Q ss_pred HHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCe
Q 020270 147 EAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNV 206 (328)
Q Consensus 147 ~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~ 206 (328)
.|+..+..+....+++.|.+....+. .+.+|+++++..++.+++++|++.|++....+
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~~~~--~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 214 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNRVTY--QGYSPYQLTWGRPSTRIQQQLGQLTLENLQML 214 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCCCT--TCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcccC--CCCCHHHHHHccCchHHHHHHHHcchhhhhcC
Confidence 99888776666677777777665543 56677776666699999999999998654333
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=2.6e-28 Score=209.25 Aligned_cols=186 Identities=18% Similarity=0.160 Sum_probs=158.8
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCC----CCCccCCCCCCHHHHHH
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGA----PWNALSSSNLSAGDFAM 78 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga----~~n~~d~~g~tpL~~A~ 78 (328)
.|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+ +++..|..|.||||+|+
T Consensus 45 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~ 124 (241)
T 1k1a_A 45 LRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHH
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999988 89999999999999999
Q ss_pred HcCCHHHHHHHHHcCCChhhhh-h----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHh
Q 020270 79 DSGHQEVFEVLLNAGIQAELIL-G----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI 153 (328)
Q Consensus 79 ~~g~~~~v~~Ll~~g~~~~~~~-~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~ 153 (328)
..|+.+++++|+++|++++..+ . ||+.|+..++.+++++|++.+. +.+..+..+.||||.|+..+.
T Consensus 125 ~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~ 195 (241)
T 1k1a_A 125 NTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGA---------NVNAQMYSGSSALHSASGRGL 195 (241)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC---------CTTCBCTTSCBHHHHHHHHTC
T ss_pred HcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999998766 2 9999999999999999998642 233444566799999998888
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG 199 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g 199 (328)
.+....+++.|.+....+. .+.+|+++++..++.++++.|.+.+
T Consensus 196 ~~~v~~Ll~~ga~~~~~~~--~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 196 LPLVRTLVRSGADSSLKNC--HNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp HHHHHHHHHTTCCTTCCCT--TSCCTTTTCSSHHHHHHHTC-----
T ss_pred HHHHHHHHhcCCCCCCcCC--CCCCHHHHHHhcCcHHHHhhhccCC
Confidence 7777778887777665543 5667776666669999999998765
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=9e-29 Score=216.63 Aligned_cols=190 Identities=21% Similarity=0.206 Sum_probs=134.9
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCC--------CcccCCCCCcHHHHHHHhCcH-HHHHHHHHcCCCCCccCCCCCCH
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGAD--------VSYFDSDGLTPLMHAAKLGHA-NLVKTLLEAGAPWNALSSSNLSA 73 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad--------~n~~d~~G~TpLh~Aa~~g~~-~~v~~Ll~~ga~~n~~d~~g~tp 73 (328)
++.+||+.||..|+.++|++||+.|++ ++..|..|.||||.|+..++. .++++|+++|+++|.+|.+|+||
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~Tp 89 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSP 89 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCH
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 467999999999999999999999875 466778899999999988776 48999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHH
Q 020270 74 GDFAMDSGHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAH 149 (328)
Q Consensus 74 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~ 149 (328)
||+|+..|+.+++++|++.|++++..+. |++.++..++.+++++|++.+. +.+..+..|.||||+|+
T Consensus 90 Lh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~---------~~n~~d~~g~TpL~~A~ 160 (269)
T 4b93_B 90 LHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNA---------KPNKKDLSGNTPLIYAC 160 (269)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC---------CSCCCCTTCCCHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCC---------CCCCCCCCCCCHHHHHH
Confidence 9999999999999999999999987765 9999999999999999987542 33344556779999999
Q ss_pred HHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 150 AKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 150 ~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
..+..+....+++.|.+....+. .+.+|+++++..++.+++++|++.|++..
T Consensus 161 ~~g~~~~v~~Ll~~gadvn~~~~--~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 161 SGGHHELVALLLQHGASINASNN--KGNTALHEAVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp HTTCGGGHHHHHHTTCCTTCBCT--TSCBHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HCCCHHHHHHHHHCCCCCCcccc--CCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 88887777777887777665543 56677766666699999999999997643
No 21
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=2.2e-28 Score=228.30 Aligned_cols=121 Identities=25% Similarity=0.247 Sum_probs=110.9
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
+.|.||||.||..|+.++|++|+++|+++|..+..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIG 91 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
+.+++++|+++|++++..+. ||+.|+..++.+.+++|+...
T Consensus 92 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 136 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 136 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Confidence 99999999999999887665 999999999988888888764
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=6e-28 Score=205.88 Aligned_cols=188 Identities=19% Similarity=0.170 Sum_probs=161.9
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||.|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 38 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 38 QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKN 117 (231)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCC
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGG 157 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~ 157 (328)
+.+++++|+++|++++..+. |++.|+..++.+++++|++.+. +.+..+..+.||||.|+..+..+..
T Consensus 118 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v 188 (231)
T 3aji_A 118 RHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA---------STNIQDTEGNTPLHLACDEERVEEA 188 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---------CSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC---------CccccCCCCCCHHHHHHHCCCHHHH
Confidence 99999999999999987765 9999999999999999998542 2333445677999999887776666
Q ss_pred CceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC
Q 020270 158 GHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW 200 (328)
Q Consensus 158 ~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~ 200 (328)
+.+++.|.+....+. .+.+|++.++..++.+++++|++.|+
T Consensus 189 ~~Ll~~ga~~~~~~~--~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 189 KFLVTQGASIYIENK--EEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp HHHHHTTCCSCCCCT--TSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCC--CCCCHHHHHHhhHHHHHHHHHccccc
Confidence 777777777665542 45566655544489999999998764
No 23
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=3.5e-29 Score=217.21 Aligned_cols=189 Identities=16% Similarity=0.148 Sum_probs=152.2
Q ss_pred hhHHHHHHHHcCCHH----HHHHHHhCCCCCcc----cCCCCCcHHHHHHHh---CcHHHHHHHHHcCCCCCccC-----
Q 020270 4 EGEQLCEAARNGDID----KVKALIGSGADVSY----FDSDGLTPLMHAAKL---GHANLVKTLLEAGAPWNALS----- 67 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~----~v~~LL~~gad~n~----~d~~G~TpLh~Aa~~---g~~~~v~~Ll~~ga~~n~~d----- 67 (328)
|.||||.||..|+.+ ++++|+++|+++|. +|..|.||||+|+.. |+.++|++|+++|++++..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 789999999999997 66777789999998 899999999999999 99999999999999887443
Q ss_pred ------CCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhh---------------h--HHHhhccCCCCCcchhhhhcccc
Q 020270 68 ------SSNLSAGDFAMDSGHQEVFEVLLNAGIQAELIL---------------G--TIARAGNKNSNSNGDYLEDRVSF 124 (328)
Q Consensus 68 ------~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~---------------~--~l~~a~~~~~~~~~~~L~~~~~~ 124 (328)
..|.||||+|+..|+.+++++|+++|++++..+ + |||.|+..++.+++++|++....
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 679999999999999999999999999998764 4 99999999999999999983100
Q ss_pred cCCccccccchhhhhhccchHHHHHHH--Hhhc-------CCCceeeecccC-------CcchhHHhccCCceEEeeccC
Q 020270 125 SEGKLVDSDSKAIMMAWEKPLMEAHAK--AICS-------GGGHILNIGFGM-------GLVDTAIQQYSPVTHTILEAH 188 (328)
Q Consensus 125 ~~~~l~~~~~~~~~~~~~tpL~~a~~~--~~~~-------~~~~iLe~g~~~-------g~~~~~~~~~~~~~~~a~e~~ 188 (328)
..+.+..+..|.||||+|+.. +..+ ..+.+++.|.+. ...+. .+.+|+++++..++
T Consensus 162 ------ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~--~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 162 ------PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNH--QGLTPLKLAAKEGK 233 (256)
T ss_dssp ------CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT--TSCCHHHHHHHTTC
T ss_pred ------CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCC--CCCCHHHHHHHhCC
Confidence 113344455677999999873 2222 334566666665 33332 55677766666699
Q ss_pred HHHHHHHHHcCC
Q 020270 189 PEVYERMLRTGW 200 (328)
Q Consensus 189 ~~~~~~L~~~g~ 200 (328)
.+++++|+++|.
T Consensus 234 ~~~v~~Ll~~g~ 245 (256)
T 2etb_A 234 IEIFRHILQREF 245 (256)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC
Confidence 999999999874
No 24
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=1.3e-27 Score=208.13 Aligned_cols=184 Identities=21% Similarity=0.171 Sum_probs=156.2
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
.+|.||||.|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|
T Consensus 34 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~ 112 (261)
T 2xai_A 34 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRG 112 (261)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence 3688999999999999999999999999999999999999999999999999999999999986 456999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCC
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGG 157 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~ 157 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.. .+ .+..+.||||.|+..+..+..
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~-~~~~g~t~Lh~A~~~~~~~~v 182 (261)
T 2xai_A 113 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD---------VN-QGKGQDSPLHAVARTASEELA 182 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC---------TT-CCBTTBCHHHHHHHHTCHHHH
T ss_pred cHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC---------CC-CCCCCCChHHHHHHcCCHHHH
Confidence 99999999999999987765 99999999999999999986531 11 134556999999988887777
Q ss_pred CceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC
Q 020270 158 GHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW 200 (328)
Q Consensus 158 ~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~ 200 (328)
..+++.|.+....+. .+.+|+++++ .+.++++.|++.+.
T Consensus 183 ~~Ll~~gad~~~~d~--~g~tpl~~A~--~~~~~~~~ll~~~~ 221 (261)
T 2xai_A 183 CLLMDFGADTQAKNA--EGKRPVELVP--PESPLAQLFLEREG 221 (261)
T ss_dssp HHHHHTTCCTTCCCT--TSCCGGGGSC--TTCTHHHHHHHC-C
T ss_pred HHHHHcCCCCCCcCC--CCCChhhhcc--ccccHHHHHHhccC
Confidence 778888887766553 5666665555 34458999999764
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=4.2e-28 Score=206.28 Aligned_cols=189 Identities=18% Similarity=0.170 Sum_probs=154.5
Q ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCCCc-ccCCCCCcHHHHHHHhCcHHHHHHHHHcC--CCCCc-cCCCCCCHHHHHHH
Q 020270 4 EGEQLCEAARNGDIDKVKALIGSGADVS-YFDSDGLTPLMHAAKLGHANLVKTLLEAG--APWNA-LSSSNLSAGDFAMD 79 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~~v~~LL~~gad~n-~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g--a~~n~-~d~~g~tpL~~A~~ 79 (328)
|.||||.||..|+.++|+.|+++|++++ .+|..|.||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 5799999999999999999999998764 48999999999999999999999999999 56666 78899999999999
Q ss_pred cCCHHHHHHHHHcC--CChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHh
Q 020270 80 SGHQEVFEVLLNAG--IQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI 153 (328)
Q Consensus 80 ~g~~~~v~~Ll~~g--~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~ 153 (328)
.|+.+++++|+++| ++++..+. ||+.|+..++.+++++|++.+. +.+..+..+.||||.|+..+.
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGA---------SVRIKDKFNQIPLHRAASVGS 152 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC---------CSCCCCTTSCCHHHHHHHTTC
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCC---------CccccCCCCCCHHHHHHHcCC
Confidence 99999999999999 77766554 9999999999999999998642 223334456799999987776
Q ss_pred hcCCCceeeec-ccCCcchhHHhccCCceEEeeccCHHHHHHHH-HcCCCCC
Q 020270 154 CSGGGHILNIG-FGMGLVDTAIQQYSPVTHTILEAHPEVYERML-RTGWGEK 203 (328)
Q Consensus 154 ~~~~~~iLe~g-~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~-~~g~~~~ 203 (328)
.+..+.+++.| ......+. .+.+|+++++..++.++++.|+ +.|++..
T Consensus 153 ~~~v~~Ll~~g~~~~~~~d~--~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 153 LKLIELLCGLGKSAVNWQDK--QGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp HHHHHHHHTTTCCCSCCCCT--TSCCHHHHHHHTTCHHHHHHHHHHHCCCSC
T ss_pred HHHHHHHHhcCcccccCcCC--CCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 55555566666 54444442 5667776666669999999999 8887643
No 26
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.4e-27 Score=209.20 Aligned_cols=198 Identities=21% Similarity=0.172 Sum_probs=147.5
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 38 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 117 (285)
T 1wdy_A 38 GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 117 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhh----------h----hHHHhhccCCCCCcchhhhhcccccCCc--------------------
Q 020270 83 QEVFEVLLNAGIQAELI----------L----GTIARAGNKNSNSNGDYLEDRVSFSEGK-------------------- 128 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~----------~----~~l~~a~~~~~~~~~~~L~~~~~~~~~~-------------------- 128 (328)
.+++++|+++|++++.. + .|++.|+..++.+++++|++........
T Consensus 118 ~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 197 (285)
T 1wdy_A 118 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD 197 (285)
T ss_dssp HHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTT
T ss_pred HHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccch
Confidence 99999999999998765 2 1999999999999999998752111000
Q ss_pred -------ccc--ccchhhhhhccchHHHHHHHHhhcCCCceee-ecccCCcchhHHhccCCceEEeeccCHHHHHHHHHc
Q 020270 129 -------LVD--SDSKAIMMAWEKPLMEAHAKAICSGGGHILN-IGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRT 198 (328)
Q Consensus 129 -------l~~--~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe-~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~ 198 (328)
++. .+.+..+..+.||||.|+..+..+..+.+++ .|......+. .+.+|+++++..++.+++++|+++
T Consensus 198 ~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~--~g~t~l~~A~~~~~~~i~~~Ll~~ 275 (285)
T 1wdy_A 198 VEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS--DGKTALLLAVELKLKKIAELLCKR 275 (285)
T ss_dssp HHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCC--CCCcHHHHHHHcCcHHHHHHHHHc
Confidence 000 1122233445666666665555444444444 4444443332 344444444444677777777776
Q ss_pred CCCC
Q 020270 199 GWGE 202 (328)
Q Consensus 199 g~~~ 202 (328)
|++.
T Consensus 276 Ga~~ 279 (285)
T 1wdy_A 276 GAST 279 (285)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 6553
No 27
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=3.3e-27 Score=206.82 Aligned_cols=199 Identities=20% Similarity=0.246 Sum_probs=162.5
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCccc-CCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYF-DSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~-d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
+|.||||.|++.|+.++|++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 6899999999999999999999999999988 788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCc-cccccchhhhhhccchHHHHHHHHhhcC
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGK-LVDSDSKAIMMAWEKPLMEAHAKAICSG 156 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~-l~~~~~~~~~~~~~tpL~~a~~~~~~~~ 156 (328)
+.+++++|+++|++++..+. |++.|+..++.+++++|++.+...... ............+.||||.|+..+..+.
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 163 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 163 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHH
Confidence 99999999999999987665 999999999999999999875321110 0001122224556799999988877655
Q ss_pred CCceeee-cccCCcchhHHhccCCceEEeeccC----HHHHHHHHHcCCCCC
Q 020270 157 GGHILNI-GFGMGLVDTAIQQYSPVTHTILEAH----PEVYERMLRTGWGEK 203 (328)
Q Consensus 157 ~~~iLe~-g~~~g~~~~~~~~~~~~~~~a~e~~----~~~~~~L~~~g~~~~ 203 (328)
...+++. |......+. .+.+|+++++..++ .+++++|++.|++..
T Consensus 164 v~~Ll~~~~~~~~~~~~--~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~ 213 (285)
T 1wdy_A 164 LKILLDEMGADVNACDN--MGRNALIHALLSSDDSDVEAITHLLLDHGADVN 213 (285)
T ss_dssp HHHHHHTSCCCTTCCCT--TSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS
T ss_pred HHHHHHhcCCCCCccCC--CCCCHHHHHHHccccchHHHHHHHHHHcCCCCC
Confidence 5556654 555544432 56677766666688 899999999987643
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=3.2e-28 Score=213.13 Aligned_cols=180 Identities=20% Similarity=0.193 Sum_probs=133.7
Q ss_pred chhHHHHHHHHcCCHH-HHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDID-KVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~-~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
.+.||||.|+..++.+ +++.|+++|+|+|.+|.+|+||||+|+..|+.++|++|++.|++++..+..|.||+++|+..+
T Consensus 51 ~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~ 130 (269)
T 4b93_B 51 EFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQG 130 (269)
T ss_dssp ------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccC
Confidence 4679999999988764 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCC
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGG 157 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~ 157 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+. +.+..+..|.||||+|+..+..+..
T Consensus 131 ~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga---------dvn~~~~~g~t~Lh~A~~~g~~~~v 201 (269)
T 4b93_B 131 HFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGA---------SINASNNKGNTALHEAVIEKHVFVV 201 (269)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTC---------CTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC---------CCCccccCCCcHHHHHHHcCCHHHH
Confidence 99999999999999988765 9999999999999999998542 3445556678999999988887777
Q ss_pred CceeeecccCCcchhHHhccCCceEEeeccCHHHHHHH
Q 020270 158 GHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERM 195 (328)
Q Consensus 158 ~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L 195 (328)
+.+++.|++..+.+. .+.+|+++++..+ +++++|
T Consensus 202 ~~Ll~~Gad~~~~d~--~G~TpL~~A~~~~--~i~~lL 235 (269)
T 4b93_B 202 ELLLLHGASVQVLNK--RQRTAVDCAEQNS--KIMELL 235 (269)
T ss_dssp HHHHHTTCCSCCCCT--TSCCSGGGSCTTC--HHHHHT
T ss_pred HHHHHCCCCCCCcCC--CCCCHHHHHHhCC--cHHHHH
Confidence 778888887776653 5666765554334 344443
No 29
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.94 E-value=4e-28 Score=222.38 Aligned_cols=189 Identities=14% Similarity=0.109 Sum_probs=163.0
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcC---CCCCccCCCCCCHHHHHHH
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAG---APWNALSSSNLSAGDFAMD 79 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g---a~~n~~d~~g~tpL~~A~~ 79 (328)
.|.||||+|+..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|+++| ++++..|..|.||||+|+.
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~ 244 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH 244 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHH
Confidence 6889999999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred cC---CHHHHHHHHHcCCChhhh--------h----hHHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccch
Q 020270 80 SG---HQEVFEVLLNAGIQAELI--------L----GTIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKP 144 (328)
Q Consensus 80 ~g---~~~~v~~Ll~~g~~~~~~--------~----~~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tp 144 (328)
.+ +.+++++|+++|++++.. + .||+.|+..++.+++++|++.... +.+..+..|.||
T Consensus 245 ~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~--------~~n~~d~~g~Tp 316 (373)
T 2fo1_E 245 NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS--------NKDKQDEDGKTP 316 (373)
T ss_dssp SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC--------CTTCCCTTCCCH
T ss_pred hCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC--------CccCcCCCCCCH
Confidence 98 899999999999998752 1 199999999999999999975421 334445567799
Q ss_pred HHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC
Q 020270 145 LMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG 201 (328)
Q Consensus 145 L~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~ 201 (328)
||.|+..+..+..+.+++.|.+....+. .+.+|+++++..++.+++++|++.+++
T Consensus 317 L~~A~~~g~~~iv~~Ll~~gad~~~~d~--~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 317 IMLAAQEGRIEVVMYLIQQGASVEAVDA--TDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCCCS--SSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccCCCC--CCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999998887777778888887766553 556676666666999999999998865
No 30
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=2.7e-27 Score=208.93 Aligned_cols=185 Identities=21% Similarity=0.177 Sum_probs=155.6
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||+||..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..|
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g 168 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRG 168 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHT
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcC
Confidence 367899999999999999999999999999999999999999999999999999999999998654 5999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCC
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGG 157 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~ 157 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.. .+ .+..+.||||.|+..+..+..
T Consensus 169 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---------~~-~~~~g~t~L~~A~~~~~~~~v 238 (285)
T 3d9h_A 169 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD---------VN-QGKGQDSPLHAVVRTASEELA 238 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC---------TT-CCBTTBCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC---------CC-CCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999987765 99999999999999999986431 11 134556999999888776666
Q ss_pred CceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHc-CCC
Q 020270 158 GHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRT-GWG 201 (328)
Q Consensus 158 ~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~-g~~ 201 (328)
..+++.|.+....+. .+.+|++.++ .+.++++.|++. |++
T Consensus 239 ~~Ll~~gad~~~~d~--~g~t~l~~A~--~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 239 CLLMDFGADTQAKNA--EGKRPVELVP--PESPLAQLFLEREGAS 279 (285)
T ss_dssp HHHHHTTCCTTCCCT--TSCCGGGGSC--TTSHHHHHHHHHC---
T ss_pred HHHHHCCCCCCCcCC--CCCCHHHHhc--CccHHHHHHHHhhccC
Confidence 777777777666553 5566665555 567999999997 543
No 31
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=8.4e-27 Score=189.75 Aligned_cols=122 Identities=35% Similarity=0.443 Sum_probs=116.3
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
++|.||||.|+..++.++++.|+++|++++.+|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|
T Consensus 35 ~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 35 SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 114 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhccc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVS 123 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~ 123 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.
T Consensus 115 ~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 115 HKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 99999999999999998776 9999999999999999998764
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=4.9e-28 Score=213.73 Aligned_cols=181 Identities=16% Similarity=0.058 Sum_probs=155.4
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCC-CCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSN-LSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g-~tpL~~A~~~g 81 (328)
+|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~ 140 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN 140 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred CHHHHHHHHHcCCChhhh-hh--HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccch-HHHHHHHHhhcCC
Q 020270 82 HQEVFEVLLNAGIQAELI-LG--TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKP-LMEAHAKAICSGG 157 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~-~~--~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tp-L~~a~~~~~~~~~ 157 (328)
+.+++++|+++|++.... .+ ||+.|+..++.+++++|++.+. +.+..+..+.|| ||.|+..+..+..
T Consensus 141 ~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga---------d~n~~~~~g~t~~L~~A~~~~~~~~v 211 (285)
T 3kea_A 141 DVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMT---------STNTNNSLLFIPDIKLAIDNKDIEML 211 (285)
T ss_dssp CHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHH---------HTCTTCCCBCCTTHHHHHHHTCHHHH
T ss_pred CHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCC---------CCCcccCCCCChHHHHHHHcCCHHHH
Confidence 999999999999887443 23 9999999999999999998653 233444556687 9999888876666
Q ss_pred CceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC
Q 020270 158 GHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG 201 (328)
Q Consensus 158 ~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~ 201 (328)
..+++.|++....+. .++..++.+++++|+++|++
T Consensus 212 ~~Ll~~gad~~~~~~---------~a~~~~~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 212 QALFKYDINIYSANL---------ENVLLDDAEIAKMIIEKHVE 246 (285)
T ss_dssp HHHTTSCBCSTTTTG---------GGGTTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCh---------hhhhcCCHHHHHHHHHcCCC
Confidence 667777776655431 22346899999999999865
No 33
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=5.4e-27 Score=190.71 Aligned_cols=119 Identities=34% Similarity=0.393 Sum_probs=107.7
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.+.|+|+.||+.|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 92 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGH 92 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhc
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDR 121 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~ 121 (328)
.+++++|+++|++++..+. ||+.|+..++.+++++|++.
T Consensus 93 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 135 (169)
T 2y1l_E 93 LEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN 135 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999876543 66666666666666666654
No 34
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=2.4e-27 Score=191.09 Aligned_cols=120 Identities=19% Similarity=0.259 Sum_probs=106.5
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
+...||||.|+..|+.+++++|+++|++++.+|..|.||||+|+. |+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 456899999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 126 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc
Confidence 99999999999999876544 666666666666666666543
No 35
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=5.4e-27 Score=190.12 Aligned_cols=141 Identities=22% Similarity=0.205 Sum_probs=118.0
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.+.||||.||..|+.++++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHH
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKA 152 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~ 152 (328)
.+++++|+++|++++..+. ||+.|+..++.+++++|++.+. +.+..+..+.|||+.|+..+
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA---------DPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999876554 6777776666666666665332 12222333446666664443
No 36
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=4.4e-27 Score=201.30 Aligned_cols=185 Identities=24% Similarity=0.232 Sum_probs=156.2
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAG-APWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-a~~n~~d~~g~tpL~~A~~~ 80 (328)
+.|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+|+..
T Consensus 42 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 121 (237)
T 3b7b_A 42 EDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY 121 (237)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Confidence 35789999999999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcC
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSG 156 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~ 156 (328)
|+.+++++|+++|++++..+. |++.|+..++.+++++|++.+. +.+..+..+.||||.|+..+..+.
T Consensus 122 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~ 192 (237)
T 3b7b_A 122 KHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKC---------DLHAVNIHGDSPLHIAARENRYDC 192 (237)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTC---------CTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHhCCHhH
Confidence 999999999999999987765 9999999999999999988642 233344566799999988777666
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHH
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLR 197 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~ 197 (328)
...+++.|.+....+. .+.+|+++++..++...+..|++
T Consensus 193 v~~Ll~~gad~~~~d~--~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 193 VVLFLSRDSDVTLKNK--EGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHHHTTTCCTTCCCT--TSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCccCC--CCCCHHHHHHHHHHHHHHHHHHH
Confidence 6667777776665543 56667666666688755555543
No 37
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=2.4e-27 Score=207.82 Aligned_cols=172 Identities=19% Similarity=0.094 Sum_probs=140.6
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCC--------------------
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAP-------------------- 62 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~-------------------- 62 (328)
.|.||||+||..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 44 LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 578999999999999999999999999999999999999999999999999999998865
Q ss_pred ---------------------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhh-----HHHhhccCC
Q 020270 63 ---------------------------WNALSSSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILG-----TIARAGNKN 110 (328)
Q Consensus 63 ---------------------------~n~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----~l~~a~~~~ 110 (328)
++..+..|.||||+|+..|+.+++++|+++|++++..+. |||.|+..+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 203 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC
Confidence 778889999999999999999999999999999988652 999999999
Q ss_pred CCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEee
Q 020270 111 SNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTIL 185 (328)
Q Consensus 111 ~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~ 185 (328)
+.+++++|++.+. +.+..+..|.||||.|+..+..+..+.+++.|.+....+. .+.+|+..+..
T Consensus 204 ~~~~v~~Ll~~ga---------d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~--~g~tpl~~a~~ 267 (282)
T 1oy3_D 204 AASVLELLLKAGA---------DPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGG--DKLSPCSSSGS 267 (282)
T ss_dssp CHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred CHHHHHHHHHcCC---------CCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCC--cccccccccCC
Confidence 9999999998642 3444556677999999877766666667777777665543 55666555443
No 38
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=8.7e-28 Score=205.40 Aligned_cols=183 Identities=16% Similarity=0.104 Sum_probs=148.4
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.+.||||.||..|+.++|++||++|+++|.+|..|.||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh-----HHHhh--ccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhc
Q 020270 83 QEVFEVLLNAGIQAELILG-----TIARA--GNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICS 155 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~-----~l~~a--~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~ 155 (328)
.+++++|+++|++++..+. ||+.| +..++.+++++|++.+. +.+..+..+.||++.++.. .
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga---------~~~~~~~~~~~~l~~~~~~---~ 167 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQ---------SMGLMNSGAVYALWDYSAE---F 167 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH---------HTTTSGGGEEEESSCBCCS---S
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC---------CcccccCCchHHHHHHhhc---c
Confidence 9999999999999987642 99999 89999999999998653 2223344556888754211 2
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHH
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLR 197 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~ 197 (328)
....+++.|....+......+.+|+++++..++.++++...-
T Consensus 168 ~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 168 GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred ccccCccccccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 224455556554333333356778777777788888776443
No 39
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=4.6e-27 Score=219.41 Aligned_cols=198 Identities=20% Similarity=0.161 Sum_probs=126.2
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 145 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 224 (437)
T 1n11_A 145 KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ 224 (437)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 46678888888888888888888877777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCc----------------------cc--cccc
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGK----------------------LV--DSDS 134 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~----------------------l~--~~~~ 134 (328)
.+++++|+++|++++..+. ||+.|+..++.+++++|++........ ++ ..+.
T Consensus 225 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 304 (437)
T 1n11_A 225 VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 304 (437)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccC
Confidence 7777777777777665543 777777777777777776643210000 00 0011
Q ss_pred hhhhhhccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC
Q 020270 135 KAIMMAWEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE 202 (328)
Q Consensus 135 ~~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~ 202 (328)
+..+..+.||||.|+..+..+..+.+++.|.+....+. .+.+|+++++..++.+++++|+++|++.
T Consensus 305 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~--~g~t~L~~A~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 305 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK--LGYSPLHQAAQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp TCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCC--CCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence 22233455666666555444444444444444433332 3445555555557777777777766543
No 40
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=1.6e-26 Score=197.56 Aligned_cols=191 Identities=23% Similarity=0.258 Sum_probs=145.1
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSS-SNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~-~g~tpL~~A~~~ 80 (328)
+.+.||||.|++.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 3578999999999999999999999999999999999999999999999999999999998887654 489999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHh-hc
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI-CS 155 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~-~~ 155 (328)
|+.+++++|++.|++++..+. |++.|+..++.+++++|++.+. +.+..+..+.||||.|+..+. ..
T Consensus 87 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~---------~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 87 GHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ---------DVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHHCCSST
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCC---------CccccCCCCCcHHHHHHHhCChHH
Confidence 999999999999999887655 9999999999999999987542 222333445688888865544 22
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE 202 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~ 202 (328)
....+++.|.+....+. ..+.+|++.++..++.++++.|++.|++.
T Consensus 158 ~~~~L~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 203 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDK-YHKNTALHWAVLAGNTTVISLLLEAGANV 203 (240)
T ss_dssp THHHHHHTTCCTTCCCT-TTCCCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred HHHHHHhcCCCcchhhc-cCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 23334444444433221 13345554444448888888888887654
No 41
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=6.1e-28 Score=221.12 Aligned_cols=198 Identities=20% Similarity=0.134 Sum_probs=156.9
Q ss_pred chhHHHHHHHHcCCHHHHHHHH--------hCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHH
Q 020270 3 KEGEQLCEAARNGDIDKVKALI--------GSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAG 74 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL--------~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL 74 (328)
.|.||||+||..|+.++|++|+ ++|+++|.+|..|.||||+|+..|+.++|++|+++|++++..|..|.|||
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L 203 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 203 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHH
Confidence 5889999999999998888776 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcC---CChhhhhh----HHHhhccCC---CCCcchhhhhcccccCCccccccchhhhhhccch
Q 020270 75 DFAMDSGHQEVFEVLLNAG---IQAELILG----TIARAGNKN---SNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKP 144 (328)
Q Consensus 75 ~~A~~~g~~~~v~~Ll~~g---~~~~~~~~----~l~~a~~~~---~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tp 144 (328)
|+|+..|+.+++++|+++| ++++..+. ||+.|+..+ +.+++++|++.+..-... .....+..+..+.||
T Consensus 204 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~-~~~~~~~~d~~g~t~ 282 (373)
T 2fo1_E 204 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD-GAARKDSEKYKGRTA 282 (373)
T ss_dssp HHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCC-SGGGTSSSSCCCCCT
T ss_pred HHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccc-cccccCcccccCCCH
Confidence 9999999999999999987 67766554 999999887 677888888865321100 000112234466799
Q ss_pred HHHHHHHHhhcCCCceeeec-ccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 145 LMEAHAKAICSGGGHILNIG-FGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 145 L~~a~~~~~~~~~~~iLe~g-~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
||.|+..+..+..+.+++.| ......+. .+.+|+++++..++.+++++|++.|++..
T Consensus 283 Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~--~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDE--DGKTPIMLAAQEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp HHHHHSSCCHHHHHHHHHHSCCCTTCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred HHHHHHhCCHHHHHHHHHhcCCCccCcCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 99997766655445555554 55444442 56677766666699999999999997643
No 42
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=2.3e-26 Score=196.52 Aligned_cols=189 Identities=19% Similarity=0.131 Sum_probs=157.5
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDS-DGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
..|.||||.|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 40 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 119 (240)
T 3eu9_A 40 KENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQF 119 (240)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 3578999999999999999999999999886654 599999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCC-CCcchhhhhcccccCCccccccchhhhh-hccchHHHHHHHHhh
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNS-NSNGDYLEDRVSFSEGKLVDSDSKAIMM-AWEKPLMEAHAKAIC 154 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~-~~~~~~L~~~~~~~~~~l~~~~~~~~~~-~~~tpL~~a~~~~~~ 154 (328)
|+.+++++|+++|++++..+. |++.|+..++ .+.+++|..... +.+.... .+.||||.|+..+..
T Consensus 120 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~---------~~~~~~~~~g~t~L~~A~~~~~~ 190 (240)
T 3eu9_A 120 GHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNV---------SVNLGDKYHKNTALHWAVLAGNT 190 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTC---------CTTCCCTTTCCCHHHHHHHHTCH
T ss_pred CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCC---------CcchhhccCCCcHHHHHHHcCCH
Confidence 999999999999999987765 9999996665 677777776442 2233333 678999999998887
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG 201 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~ 201 (328)
+..+.+++.|.+....+. .+.+|++.++..++.++++.|++.+..
T Consensus 191 ~~v~~Ll~~g~~~~~~~~--~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 191 TVISLLLEAGANVDAQNI--KGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp HHHHHHHHHTCCTTCBCT--TSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCCCCcCC--CCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 777778888877665552 455666655556999999999998854
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=8.1e-28 Score=210.62 Aligned_cols=194 Identities=16% Similarity=0.120 Sum_probs=151.7
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHh----CCCCCc----ccCCCCCcHHHHHHHh---CcHHHHHHHHHcCCCC-------
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIG----SGADVS----YFDSDGLTPLMHAAKL---GHANLVKTLLEAGAPW------- 63 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~----~gad~n----~~d~~G~TpLh~Aa~~---g~~~~v~~Ll~~ga~~------- 63 (328)
..|.||||.||+.|+.++|+.||+ .+++++ ..|..|.||||+|+.. |+.++|++|+++|+++
T Consensus 11 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i 90 (273)
T 2pnn_A 11 LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFV 90 (273)
T ss_dssp CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHh
Confidence 367899999999999999998887 667776 4588999999999987 9999999999998763
Q ss_pred Cc----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhh----------------h--HHHhhccCCCCCcchhhhhc
Q 020270 64 NA----LSSSNLSAGDFAMDSGHQEVFEVLLNAGIQAELIL----------------G--TIARAGNKNSNSNGDYLEDR 121 (328)
Q Consensus 64 n~----~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~----------------~--~l~~a~~~~~~~~~~~L~~~ 121 (328)
|. .|..|.||||+|+..|+.+++++|+++|++++..+ + ||+.|+..++.+++++|++.
T Consensus 91 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (273)
T 2pnn_A 91 NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN 170 (273)
T ss_dssp TCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHC
T ss_pred hcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 33 56789999999999999999999999999998765 3 99999999999999999983
Q ss_pred ccccCCccccccchhhhhhccchHHHHHHHHh---------hcCCCceeeecccCCc-----chhHHhccCCceEEeecc
Q 020270 122 VSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI---------CSGGGHILNIGFGMGL-----VDTAIQQYSPVTHTILEA 187 (328)
Q Consensus 122 ~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~---------~~~~~~iLe~g~~~g~-----~~~~~~~~~~~~~~a~e~ 187 (328)
... ..+.+..+..+.||||.|+..+. .+....+++.|.+... ......+.+|+++++..+
T Consensus 171 ~~~------gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 171 SWQ------PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp SSC------CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred ccC------CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhC
Confidence 210 12334445567799999987543 2223346666665432 001225567776666669
Q ss_pred CHHHHHHHHHcCCC
Q 020270 188 HPEVYERMLRTGWG 201 (328)
Q Consensus 188 ~~~~~~~L~~~g~~ 201 (328)
+.+++++|+++|+.
T Consensus 245 ~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 245 KIGVLAYILQREIH 258 (273)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHCCCC
Confidence 99999999999984
No 44
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=4.6e-27 Score=195.00 Aligned_cols=119 Identities=18% Similarity=0.113 Sum_probs=105.3
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
+.|.||||.||..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFG 112 (192)
T ss_dssp TTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhh
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLED 120 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~ 120 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (192)
T 2rfm_A 113 YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLE 155 (192)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999875443 5555555555555555554
No 45
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=1.4e-26 Score=196.91 Aligned_cols=183 Identities=17% Similarity=0.144 Sum_probs=151.8
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCC--CCCcc-cCCCCCcHHHHHHHhCcHHHHHHHHHcC--CCCCccCCCCCCHHHH
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSG--ADVSY-FDSDGLTPLMHAAKLGHANLVKTLLEAG--APWNALSSSNLSAGDF 76 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~g--ad~n~-~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g--a~~n~~d~~g~tpL~~ 76 (328)
..|.||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~ 113 (228)
T 2dzn_A 34 QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHL 113 (228)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHH
Confidence 35789999999999999999999999 55555 7789999999999999999999999998 8999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHH
Q 020270 77 AMDSGHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKA 152 (328)
Q Consensus 77 A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~ 152 (328)
|+..|+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.. +.+..+..+.||||.|+..+
T Consensus 114 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 114 AVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS--------AVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC--------CSCCCCTTSCCHHHHHHHTT
T ss_pred HHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcc--------cccCcCCCCCCHHHHHHHcC
Confidence 9999999999999999999988766 99999999999999999986521 23334456679999998887
Q ss_pred hhcCCCcee-eecccCCcchhHHhccCCceEEeeccCHHHHHHHHH
Q 020270 153 ICSGGGHIL-NIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLR 197 (328)
Q Consensus 153 ~~~~~~~iL-e~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~ 197 (328)
..+....++ +.|.+....+. .+.+|++.+ .+ .++.++|++
T Consensus 186 ~~~~v~~Ll~~~ga~~~~~~~--~g~t~l~~A-~~--~~~~~~l~~ 226 (228)
T 2dzn_A 186 HGDAAVLLVEKYGAEYDLVDN--KGAKAEDVA-LN--EQVKKFFLN 226 (228)
T ss_dssp CHHHHHHHHHHHCCCSCCBCT--TSCBGGGGC-SS--TTHHHHHHT
T ss_pred CHHHHHHHHHhcCCCCCccCC--CCCcHHHHH-HH--HHHHHHHHh
Confidence 766667777 77887776553 455565544 33 255566554
No 46
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=2e-26 Score=208.02 Aligned_cols=197 Identities=25% Similarity=0.229 Sum_probs=157.8
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGS-GADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~-gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
.+.|+||.||+.|+.+.|+.||.. +++++.+|..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCC
Confidence 468999999999999999999985 8999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccc-----------------------
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDS----------------------- 134 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~----------------------- 134 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.... ..+..+
T Consensus 103 ~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 180 (351)
T 3utm_A 103 HYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT--LVNCHGKSAVDMAPTPELRERLTYEFKGH 180 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc--cccCCCCcchHHHhhhhhHHHHHhhhccc
Confidence 99999999999999988765 9999999999999999998753211 001000
Q ss_pred ------------------------hhhhhhccchHHHHHHHH---hhcCCCceeeecccCCcchhHHhccCCceEEeecc
Q 020270 135 ------------------------KAIMMAWEKPLMEAHAKA---ICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEA 187 (328)
Q Consensus 135 ------------------------~~~~~~~~tpL~~a~~~~---~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~ 187 (328)
......+.||||.|+... .......+++.|.+....+. .+.+|++.++..+
T Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g 258 (351)
T 3utm_A 181 SLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNK--DFMTPLHVAAERA 258 (351)
T ss_dssp HHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHTT
T ss_pred HHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCC--CCCCHHHHHHHcC
Confidence 012245679999997652 22233445555655544432 5566766666669
Q ss_pred CHHHHHHHHHcCCCCC
Q 020270 188 HPEVYERMLRTGWGEK 203 (328)
Q Consensus 188 ~~~~~~~L~~~g~~~~ 203 (328)
+.+++++|++.|++.+
T Consensus 259 ~~~~v~~Ll~~ga~~n 274 (351)
T 3utm_A 259 HNDVMEVLHKHGAKMN 274 (351)
T ss_dssp CHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHCCCCCC
Confidence 9999999999997643
No 47
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=5.7e-26 Score=183.67 Aligned_cols=158 Identities=25% Similarity=0.260 Sum_probs=128.6
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHh-CCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIG-SGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~-~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
+++.||||.|++.|+.++|+.|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 468899999999999999999999 5567888889999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhhHHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCCCce
Q 020270 81 GHQEVFEVLLNAGIQAELILGTIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGGHI 160 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~i 160 (328)
|+.+++++|+++|++++..+. .+.||||.|+..+..+....+
T Consensus 86 ~~~~~v~~Ll~~g~~~~~~~~--------------------------------------~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 86 GHYEVAELLVKHGAVVNVADL--------------------------------------WKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT--------------------------------------TCCCHHHHHHHTTCHHHHHHH
T ss_pred CcHHHHHHHHhCCCCCCCcCC--------------------------------------CCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999998763211 234888888776665555556
Q ss_pred eeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC
Q 020270 161 LNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW 200 (328)
Q Consensus 161 Le~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~ 200 (328)
++.|.+....+. .+.+|+ +.+.+++.+++++|++.|+
T Consensus 128 l~~ga~~~~~~~--~g~t~l-~~a~~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 128 LQHGADPTKKNR--DGNTPL-DLVKDGDTDIQDLLRGDAA 164 (165)
T ss_dssp HHTTCCTTCCCT--TSCCTG-GGSCTTCHHHHHHHHTC--
T ss_pred HHcCCCCcccCC--CCCChh-HhHhcCChHHHHHHhhccc
Confidence 666665554442 444554 4566789999999998774
No 48
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=2.5e-26 Score=187.05 Aligned_cols=141 Identities=24% Similarity=0.263 Sum_probs=118.2
Q ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCC-CcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 4 EGEQLCEAARNGDIDKVKALIGSGAD-VSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~~v~~LL~~gad-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
+.||||.||..|+.++++.|++++.+ ++.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 57899999999999999999999987 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHh
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI 153 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~ 153 (328)
.+++++|+++|++++..+. ||+.|+..++.+++++|++.+. +.+..+..+.||||.|+..+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---------~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGA---------DLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------CccccCCCCCCHHHHHHHhCc
Confidence 9999999999999886554 7777777777777777776432 222233345577777755544
No 49
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=7.1e-26 Score=185.76 Aligned_cols=161 Identities=18% Similarity=0.222 Sum_probs=129.8
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGS-GADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~-gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
++.++||.||..|+.++|+.||++ +.+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 567999999999999999999997 6789999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhhHHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcCCCcee
Q 020270 82 HQEVFEVLLNAGIQAELILGTIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGGHIL 161 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~iL 161 (328)
+.+++++|+++|++++..+. .+.||||.|+..+..+....++
T Consensus 84 ~~~~v~~Ll~~g~~~~~~d~--------------------------------------~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAVNE--------------------------------------HGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp CHHHHHHHHHTTCCTTCCCT--------------------------------------TSCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCC--------------------------------------CCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999998764221 2347777776665555555556
Q ss_pred eecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 162 NIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 162 e~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
+.|.+....+. .+.+|++.++..++.++++.|++.|++..
T Consensus 126 ~~ga~~~~~~~--~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 126 ANGALVSICNK--YGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HTTCCSSBCCT--TSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HCCCCcchhcc--CCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 65555554442 45566555555588899999999887643
No 50
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=5.4e-26 Score=205.02 Aligned_cols=186 Identities=22% Similarity=0.160 Sum_probs=153.0
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccC----------CCCCcHHHHHHHhCcHHHHHHHHH-cCCCCCccCCCCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFD----------SDGLTPLMHAAKLGHANLVKTLLE-AGAPWNALSSSNL 71 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d----------~~G~TpLh~Aa~~g~~~~v~~Ll~-~ga~~n~~d~~g~ 71 (328)
.|.||||.|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.++|++||+ .|+++|.+|..|.
T Consensus 124 ~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~ 203 (337)
T 4g8k_A 124 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 203 (337)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCC
Confidence 57899999999999999999999999987653 468999999999999999999996 5999999999999
Q ss_pred CHHHHHHHcCC----HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccc
Q 020270 72 SAGDFAMDSGH----QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEK 143 (328)
Q Consensus 72 tpL~~A~~~g~----~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~t 143 (328)
||++.++..++ ..++++|+++|++++..+. |||.|+..++.+.+++|+.... .+.+..+..|.|
T Consensus 204 t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~--------~~vn~~d~~G~T 275 (337)
T 4g8k_A 204 NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH--------IEINDTDSDGKT 275 (337)
T ss_dssp CHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTT--------CCTTCBCTTSCB
T ss_pred cHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcC--------CcccCcCCCCCC
Confidence 99998886554 4688999999999988766 9999999999999998886432 134445566789
Q ss_pred hHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 144 PLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 144 pL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
|||+|+..+..+..+.+|+.|++.. ..+|+++++..++.+++++|+++|++.+
T Consensus 276 pL~~A~~~g~~~iv~~Ll~~GAd~n-------~~~~L~~A~~~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 276 ALLLAVELKLKKIAELLCKRGASTD-------CGDLVMTARRNYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTTSCSST-------TCCHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-------CCCHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 9999988777665566666665543 3346666666699999999999998754
No 51
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=2.2e-25 Score=174.60 Aligned_cols=120 Identities=33% Similarity=0.434 Sum_probs=114.1
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..+.||||.||..|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|+++|..|..|.||||+|+..|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDR 121 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~ 121 (328)
+.+++++|+++|++++..+. |++.|+..++.+++++|++.
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999987765 99999999999999988763
No 52
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=1.6e-25 Score=178.90 Aligned_cols=141 Identities=26% Similarity=0.303 Sum_probs=126.2
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
+..|+||.|+..|+.++|++|+++|++++ .|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 1 d~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 1 DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 35799999999999999999999999887 58899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHh
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI 153 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~ 153 (328)
.+++++|+++|++++..+. |++.|+..++.+++++|++.+. +.+..+..+.|||+.|+..+.
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---------~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA---------DVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------CccccCCCCCCHHHHHHHcCC
Confidence 9999999999999988765 9999999999999999998643 233344556799999966544
No 53
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.92 E-value=5.2e-26 Score=195.15 Aligned_cols=191 Identities=26% Similarity=0.400 Sum_probs=154.8
Q ss_pred ccccccchhhhhhccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCee
Q 020270 128 KLVDSDSKAIMMAWEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVK 207 (328)
Q Consensus 128 ~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~ 207 (328)
..++..++.+|+.|++|+|.+.....+..+.+||++|||+|+.........+..+++++.++++++.+.+..+....+++
T Consensus 32 ~~l~~~g~~vm~~we~~~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~ 111 (236)
T 3orh_A 32 THLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVI 111 (236)
T ss_dssp SEEEETTEEEEEGGGHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEE
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceE
Confidence 34455677889999999999999988889999999999999987777777788899999999999999998877788899
Q ss_pred EEecccchhccCC--CCCCEEEEecCcc-----chhhHHHHHHHHhhccCCCcEEEEecc--ccCCcchhHH----hhhH
Q 020270 208 IIFGRWQDNLSQL--ESYDGIFFDTYGE-----YYEDLREFHQHLPKLLKPGGIYSYFNG--LCGGNAFFHV----VYCH 274 (328)
Q Consensus 208 ~~~g~w~~~~~~~--~~fD~i~~d~f~e-----~~~~l~~~~~~~~~lL~~gG~~~~~~~--~g~~~~~~~~----~y~~ 274 (328)
+..++|++....+ .+||.|+||++.. ++.+...+++++.++|||||+|+|++. .+......|+ .|.+
T Consensus 112 ~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~ 191 (236)
T 3orh_A 112 PLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEE 191 (236)
T ss_dssp EEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHH
T ss_pred EEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHH
Confidence 9999998877554 5799999999853 455677899999999999999999873 3433333333 6777
Q ss_pred HHHHHHHhcCCeEEEEEeeCCCCCCccccccccccccccCcccccceee
Q 020270 275 LVSLELENLGFSMQLIPLPVKNCLGEEVWEGVKHKYWQLDTYYLPVCQF 323 (328)
Q Consensus 275 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 323 (328)
.....|.++||+++..++.+ . ..+...++|||+.++|++|+|+-
T Consensus 192 ~~~~~L~eaGF~~~~i~~~~-~----~l~pp~~~~Yw~~~~~~~P~~~~ 235 (236)
T 3orh_A 192 TQVPALLEAGFRRENIRTEV-M----ALVPPADCRYYAFPQMITPLVTK 235 (236)
T ss_dssp HTHHHHHHHTCCGGGEEEEE-E----ECCCCTTCSSCCCSEEEEEEEEC
T ss_pred HHHHHHHHcCCeEEEEEEEe-e----ccCCCCCcccccCCEEeeeeEec
Confidence 78889999999966555444 1 22334578999999999999973
No 54
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=6e-25 Score=160.51 Aligned_cols=93 Identities=44% Similarity=0.560 Sum_probs=89.6
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
+|.||||.|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC
Q 020270 83 QEVFEVLLNAGIQ 95 (328)
Q Consensus 83 ~~~v~~Ll~~g~~ 95 (328)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999975
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=3.2e-27 Score=205.18 Aligned_cols=191 Identities=16% Similarity=0.162 Sum_probs=149.6
Q ss_pred chhHHHHHHHHcCCHHHHHHHHh----CCCCCcccC----CCCCcHHHHHH---HhCcHHHHHHHHHcCCC---------
Q 020270 3 KEGEQLCEAARNGDIDKVKALIG----SGADVSYFD----SDGLTPLMHAA---KLGHANLVKTLLEAGAP--------- 62 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~----~gad~n~~d----~~G~TpLh~Aa---~~g~~~~v~~Ll~~ga~--------- 62 (328)
-+.|+||.||+.|+.+.|+.|++ +|++++..+ ..|.||||+|+ +.|+.++|++|+++|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 46899999999999996555555 999998776 67999999999 77999999999998854
Q ss_pred --CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhh----------------h--HHHhhccCCCCCcchhhhhcc
Q 020270 63 --WNALSSSNLSAGDFAMDSGHQEVFEVLLNAGIQAELIL----------------G--TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 63 --~n~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~----------------~--~l~~a~~~~~~~~~~~L~~~~ 122 (328)
++..|..|+||||+|+..|+.+++++|+++|++++..+ + |||.|+..++.+++++|++.+
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 45555689999999999999999999999999999876 2 999999999999999999832
Q ss_pred cccCCccccccchhhhhhccchHHHHHHHHh---------hcCCCceeeecccC-------CcchhHHhccCCceEEeec
Q 020270 123 SFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI---------CSGGGHILNIGFGM-------GLVDTAIQQYSPVTHTILE 186 (328)
Q Consensus 123 ~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~---------~~~~~~iLe~g~~~-------g~~~~~~~~~~~~~~~a~e 186 (328)
.. ..+.+..+..|.||||.|+..+. .+....+++.|.+. .+.+ ..+.+|+++++..
T Consensus 164 ~~------ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d--~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 164 HK------QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLN--NDGLSPLMMAAKT 235 (260)
T ss_dssp SC------CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCC--TTSCCHHHHHHHT
T ss_pred cc------CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhccc--CCCCCHHHHHHHc
Confidence 10 12334445567799999985433 22334566666654 2222 2556676666666
Q ss_pred cCHHHHHHHHHcCCC
Q 020270 187 AHPEVYERMLRTGWG 201 (328)
Q Consensus 187 ~~~~~~~~L~~~g~~ 201 (328)
++.+++++|+++|.+
T Consensus 236 g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 236 GKIGIFQHIIRREIA 250 (260)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCC
Confidence 999999999998854
No 56
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.92 E-value=3.6e-26 Score=202.42 Aligned_cols=184 Identities=20% Similarity=0.178 Sum_probs=152.0
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||.||..|+.++|++||++|+++|.+|..|.||||+|+..|+.++|++|+++|++++..|..|.||||+|+..++
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 151 (299)
T 1s70_B 72 DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM 151 (299)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcch
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-cCCChhhh----------------------------h--hHHHhhccCCCCCcchhhhhcccccCCcccc
Q 020270 83 QEVFEVLLN-AGIQAELI----------------------------L--GTIARAGNKNSNSNGDYLEDRVSFSEGKLVD 131 (328)
Q Consensus 83 ~~~v~~Ll~-~g~~~~~~----------------------------~--~~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~ 131 (328)
.++++.++. .|++++.. . .|||.|+..++.+++++|++.+.
T Consensus 152 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-------- 223 (299)
T 1s70_B 152 EELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY-------- 223 (299)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTC--------
T ss_pred HHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCC--------
Confidence 999988775 56665531 1 18999999999999999987542
Q ss_pred ccchhhhhhccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHc
Q 020270 132 SDSKAIMMAWEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRT 198 (328)
Q Consensus 132 ~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~ 198 (328)
+.+..+..|.||||.|+..+..+....+++.|++..+.+. .+.+|+ +.|.+...+.++.+++.
T Consensus 224 -d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~--~g~t~l-~~A~~~~~~~l~~l~~~ 286 (299)
T 1s70_B 224 -DVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK--VGQTAF-DVADEDILGYLEELQKK 286 (299)
T ss_dssp -CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TSCCTT-TSCCSGGGHHHHHHHHH
T ss_pred -CCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCC--CCCCHH-HHHHHHHHHHHHHHHHH
Confidence 3344455677999999888887777778888887766553 455555 55566555555555553
No 57
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=1.5e-25 Score=186.89 Aligned_cols=146 Identities=21% Similarity=0.191 Sum_probs=128.8
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLL-EAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll-~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
.+|.||||.|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+ ..+++++..|..|.||||+|+..
T Consensus 37 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 116 (201)
T 3hra_A 37 TEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEK 116 (201)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHc
Confidence 35789999999999999999999999999999999999999999999999999999 56889999999999999999999
Q ss_pred CCHHHHHHHHHcC-CChhhhhh----HHHhhccCCC-----CCcchhhhhcccccCCccccccchhhhhhccchHHHHHH
Q 020270 81 GHQEVFEVLLNAG-IQAELILG----TIARAGNKNS-----NSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHA 150 (328)
Q Consensus 81 g~~~~v~~Ll~~g-~~~~~~~~----~l~~a~~~~~-----~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~ 150 (328)
|+.+++++|+++| ++++..+. ||+.|+..+. .+++++|++.+. +.+..+..+.||||.|+.
T Consensus 117 ~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga---------~~~~~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 117 GHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA---------DQSIKDNSGRTAMDYANQ 187 (201)
T ss_dssp TCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCC---------CCCccCCCCCCHHHHHHH
Confidence 9999999999999 88887766 9999998887 778888887542 333445566799999987
Q ss_pred HHhhcC
Q 020270 151 KAICSG 156 (328)
Q Consensus 151 ~~~~~~ 156 (328)
.+..+.
T Consensus 188 ~~~~~~ 193 (201)
T 3hra_A 188 KGYTEI 193 (201)
T ss_dssp HTCHHH
T ss_pred cCCHhH
Confidence 766443
No 58
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=1.4e-25 Score=191.34 Aligned_cols=162 Identities=17% Similarity=0.072 Sum_probs=135.3
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCC-----cccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCC--------
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADV-----SYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSS-------- 68 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~-----n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~-------- 68 (328)
..|.||||+||..|+.++|++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 35 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~ 114 (232)
T 2rfa_A 35 AMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRP 114 (232)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecc
Confidence 35789999999999999999999999887 66778999999999999999999999999999999876
Q ss_pred -----CCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcc----hhhhhcccccCCccccccch
Q 020270 69 -----SNLSAGDFAMDSGHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNG----DYLEDRVSFSEGKLVDSDSK 135 (328)
Q Consensus 69 -----~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~----~~L~~~~~~~~~~l~~~~~~ 135 (328)
.|.||||+|+..|+.+++++|+++|++++..+. ||+.|+..++.+.+ ++|++.+...... .-.+
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~---~~~~ 191 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLK---SLEL 191 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSC---CGGG
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhh---hhhc
Confidence 799999999999999999999999999998776 99999999998887 7777755321100 0013
Q ss_pred hhhhhccchHHHHHHHHhhcCCCceeeeccc
Q 020270 136 AIMMAWEKPLMEAHAKAICSGGGHILNIGFG 166 (328)
Q Consensus 136 ~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~ 166 (328)
..+..+.||||.|+..+..+..+.+++.|..
T Consensus 192 ~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 192 VPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 4455667999999888876665666666554
No 59
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=1.1e-25 Score=176.25 Aligned_cols=120 Identities=23% Similarity=0.289 Sum_probs=114.3
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCC-CCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSS-NLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~-g~tpL~~A~~~ 80 (328)
+.+.||||.|+..|+.++|++|+++|++++.+|..|.||||+|+. |+.+++++|+++|+++|.+|.. |.||||+|+..
T Consensus 10 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 88 (136)
T 1d9s_A 10 GSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAARE 88 (136)
T ss_dssp CCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHH
T ss_pred CCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHc
Confidence 467899999999999999999999999999999999999999999 9999999999999999999999 99999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
|+.+++++|+++|++++..+. |++.|+..++.+++++|++.+
T Consensus 89 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 89 GFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp TCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999988765 999999999999999998754
No 60
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=1.7e-25 Score=179.13 Aligned_cols=139 Identities=24% Similarity=0.272 Sum_probs=123.4
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGS-GADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~-gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
++.||||.||..|+.++++.|+++ +.+++..|..|.||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 478999999999999999999998 45999999999999999 9999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHH
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKA 152 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~ 152 (328)
+.+++++|+++|++++..+. ||+.|+..++.+++++|++. . +.+..+..+.||||.|+..+
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~---------~~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S---------DLHRRDARGLTPLELALQRG 144 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S---------CTTCCCTTSCCHHHHHHHSC
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c---------CCCCcCCCCCCHHHHHHHcC
Confidence 99999999999999987765 99999999999999999875 1 22333445669999985443
No 61
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=4.2e-26 Score=207.94 Aligned_cols=191 Identities=17% Similarity=0.138 Sum_probs=148.9
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHc----CCCCCc-------------
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEA----GAPWNA------------- 65 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~----ga~~n~------------- 65 (328)
.|.||||+||..|+.++|++||++|++++..+ |.||||+|+..|+.++|++|+++ |++++.
T Consensus 52 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (364)
T 3ljn_A 52 FGCTALHLACKFGCVDTAKYLASVGEVHSLWH--GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEI 129 (364)
T ss_dssp TCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBT--TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEE
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCccccC--CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhh
Confidence 57899999999999999999999998888774 78899999999999999999988 888777
Q ss_pred ----cCCCCCCHHHHHHHcC--CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccch
Q 020270 66 ----LSSSNLSAGDFAMDSG--HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSK 135 (328)
Q Consensus 66 ----~d~~g~tpL~~A~~~g--~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~ 135 (328)
.|..|.||||+|+..| +.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.... ..+.+
T Consensus 130 ~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~~ 205 (364)
T 3ljn_A 130 GSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKS----SLRLD 205 (364)
T ss_dssp TTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS----SCCTT
T ss_pred ccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc----ccccc
Confidence 7888889999999988 88999999999888887765 8899998888888888887653211 11233
Q ss_pred hhhhhccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC
Q 020270 136 AIMMAWEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG 201 (328)
Q Consensus 136 ~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~ 201 (328)
..+..+.||||+|+..+..+..+.+++.|.+....+. .+.+|+++++..++.+++++|++.|++
T Consensus 206 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~--~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 206 YANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN--EHTVPLYLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT--TSCCHHHHHHHTCCHHHHHHHHHHSCH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--CCCCHHHHHHHhChHHHHHHHHHcCCc
Confidence 4445567999988877776666667777776665442 555666655566899999999888754
No 62
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=2.5e-25 Score=178.45 Aligned_cols=120 Identities=25% Similarity=0.326 Sum_probs=114.4
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCC-HHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLS-AGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~t-pL~~A~~~ 80 (328)
+.+.||||.|+..|+.++|++|+++|+++|.+|..|.||||+|+ .|+.+++++|+++|+++|.+|..|.| |||+|+..
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~ 88 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAARE 88 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHC
Confidence 56889999999999999999999999999999999999999985 99999999999999999999999999 99999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
|+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+
T Consensus 89 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g 134 (156)
T 1bi7_B 89 GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134 (156)
T ss_dssp TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC
Confidence 999999999999999988765 999999999999999998865
No 63
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=8.9e-26 Score=195.68 Aligned_cols=161 Identities=19% Similarity=0.023 Sum_probs=130.8
Q ss_pred chhHHHHHHHHc---CCHHHHHHHHhCCCCCccc-----------CCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCC
Q 020270 3 KEGEQLCEAARN---GDIDKVKALIGSGADVSYF-----------DSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSS 68 (328)
Q Consensus 3 ~~~t~L~~Aa~~---g~~~~v~~LL~~gad~n~~-----------d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~ 68 (328)
.|.||||+||.. |+.++|++||++|++++.. |..|.||||+|+..|+.++|++|+++|+++|.++.
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 121 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccc
Confidence 688999999999 9999999999999887643 36799999999999999999999999999999988
Q ss_pred C-------------CCCHHHHHHHcCCHHHHHHHHH---cCCChhhhhh----HHHhhcc--CCCCC-------cchhhh
Q 020270 69 S-------------NLSAGDFAMDSGHQEVFEVLLN---AGIQAELILG----TIARAGN--KNSNS-------NGDYLE 119 (328)
Q Consensus 69 ~-------------g~tpL~~A~~~g~~~~v~~Ll~---~g~~~~~~~~----~l~~a~~--~~~~~-------~~~~L~ 119 (328)
. |.||||+|+..|+.+++++|++ +|++++..+. |||.|+. .++.+ ++++|+
T Consensus 122 ~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll 201 (256)
T 2etb_A 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLL 201 (256)
T ss_dssp SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHH
Confidence 6 9999999999999999999999 9999998776 9999998 66666 888888
Q ss_pred hcccccCCccccccchhhhhhccchHHHHHHHHhhcCCCceeeecc
Q 020270 120 DRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGGHILNIGF 165 (328)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~ 165 (328)
+.+..-.... ...+..+..|.||||+|+..+..+..+.+++.|.
T Consensus 202 ~~ga~~~~~~--~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 202 QMGARLCPTV--QLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp HHHHHHSTTC--CGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCCccccc--ccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 7653110000 0003445567799999987776554455555544
No 64
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=6.9e-25 Score=185.83 Aligned_cols=154 Identities=20% Similarity=0.163 Sum_probs=133.7
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCC-CCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGA-DVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~ga-d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
..|.||||.|+..|+.+++++|+++++ +++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..
T Consensus 56 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 135 (223)
T 2f8y_A 56 NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 135 (223)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHc
Confidence 357899999999999999999999987 8999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcC
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSG 156 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~ 156 (328)
|+.+++++|+++|++++..+. |++.|+..++.+++++|++.+. +.+..+..+.|||+.|...+..+.
T Consensus 136 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---------~~~~~~~~g~t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 136 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA---------NRDITDHMDRLPRDIAQERMHHDI 206 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC---------CCccccccCCCHHHHHHHhcchHH
Confidence 999999999999999988765 9999999999999999998653 233334456799999977666443
Q ss_pred CCceeeec
Q 020270 157 GGHILNIG 164 (328)
Q Consensus 157 ~~~iLe~g 164 (328)
.+.+++.|
T Consensus 207 ~~~L~~~g 214 (223)
T 2f8y_A 207 VRLLDEYN 214 (223)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 33344433
No 65
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=2e-24 Score=172.45 Aligned_cols=116 Identities=28% Similarity=0.323 Sum_probs=111.1
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+
T Consensus 33 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 112 (153)
T 1awc_B 33 LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNH 112 (153)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhh
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYL 118 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L 118 (328)
.+++++|+++|++++..+. |++.|+..++.+++++|
T Consensus 113 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 113 QEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999987765 99999999988888776
No 66
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=2.1e-25 Score=200.65 Aligned_cols=187 Identities=15% Similarity=0.035 Sum_probs=126.0
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcc-cCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC---
Q 020270 7 QLCEAARNGDIDKVKALIGSGADVSY-FDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH--- 82 (328)
Q Consensus 7 ~L~~Aa~~g~~~~v~~LL~~gad~n~-~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~--- 82 (328)
.+|.|+..+..++++.|+++|+++|. +|..|.||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..|+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~ 179 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccccc
Confidence 45778888888888888888888888 78888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHcC-CChhhhhh----HHHhhcc----CCCCCcchhhhhccccc----C-Cc------cccccchhhhhhcc
Q 020270 83 QEVFEVLLNAG-IQAELILG----TIARAGN----KNSNSNGDYLEDRVSFS----E-GK------LVDSDSKAIMMAWE 142 (328)
Q Consensus 83 ~~~v~~Ll~~g-~~~~~~~~----~l~~a~~----~~~~~~~~~L~~~~~~~----~-~~------l~~~~~~~~~~~~~ 142 (328)
.++++.|++.+ ++++..+. |||.|+. .++.+++++|++....- . .. ....+.+..+..+.
T Consensus 180 ~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~ 259 (327)
T 1sw6_A 180 SGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK 259 (327)
T ss_dssp TTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------
T ss_pred HHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCC
Confidence 67777777766 55665554 8888887 77778888887654210 0 00 00335566667788
Q ss_pred chHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC
Q 020270 143 KPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 203 (328)
Q Consensus 143 tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~ 203 (328)
||||.|+. .+.+++. +....+ ..+.+|+++++..++.+++++|++.|++..
T Consensus 260 t~L~~a~~------~~~Ll~~--~~n~~d--~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 260 DSILENLD------LKWIIAN--MLNAQD--SNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp CHHHHHCS------HHHHHHH--TTTCCC--TTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred ChhHHHHH------HHHHHHh--CCCCCC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 99999853 1223333 222233 256677666666699999999999998753
No 67
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.91 E-value=1.1e-25 Score=192.80 Aligned_cols=154 Identities=17% Similarity=0.125 Sum_probs=132.1
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCC------CCccCCCCCCHHHH
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAP------WNALSSSNLSAGDF 76 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~------~n~~d~~g~tpL~~ 76 (328)
.|.||||+|+..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+
T Consensus 44 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~ 123 (236)
T 1ikn_D 44 LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHL 123 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHH
Confidence 578999999999999999999999999999999999999999999999999999999986 57778899999999
Q ss_pred HHHcCCHHHHHHHHHcCCChhhhhh-----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHH
Q 020270 77 AMDSGHQEVFEVLLNAGIQAELILG-----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAK 151 (328)
Q Consensus 77 A~~~g~~~~v~~Ll~~g~~~~~~~~-----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~ 151 (328)
|+..|+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+. +.+..+..+.||||.|+..
T Consensus 124 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga---------~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 124 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA---------DVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTC---------CSCCCCTTCCCGGGGCTTS
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------CCCcccCCCCCHHHHHHcc
Confidence 9999999999999999999987652 9999999999999999998643 3334455667999999655
Q ss_pred HhhcCCCceeeecc
Q 020270 152 AICSGGGHILNIGF 165 (328)
Q Consensus 152 ~~~~~~~~iLe~g~ 165 (328)
+..+....+++.|.
T Consensus 195 ~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 195 PSTRIQQQLGQLTL 208 (236)
T ss_dssp SCHHHHHHHHTTSC
T ss_pred CchHHHHHHHHcch
Confidence 54333344444444
No 68
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=3.4e-24 Score=164.69 Aligned_cols=120 Identities=36% Similarity=0.411 Sum_probs=114.7
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
+|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
.+++++|+++|++++..+. |++.|+..++.+++++|++.+
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 9999999999999987765 999999999999999998754
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=3.6e-24 Score=173.06 Aligned_cols=119 Identities=24% Similarity=0.300 Sum_probs=111.0
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.+.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 120 (165)
T 3twr_A 41 RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK 120 (165)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
.+++++|+++|++++..+. |++.|.. ++.+++++|.+.+
T Consensus 121 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 121 YEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred HHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 9999999999999988776 8988766 7778888887654
No 70
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=2.6e-24 Score=165.42 Aligned_cols=105 Identities=27% Similarity=0.333 Sum_probs=99.5
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.+.||||.|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhc
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAG 107 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~ 107 (328)
.+++++|+++|++++..+. |++.|.
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 9999999999999987665 777774
No 71
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=1.4e-24 Score=170.12 Aligned_cols=119 Identities=27% Similarity=0.294 Sum_probs=108.6
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
.+|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 8 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 87 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNG 87 (137)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhh
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLED 120 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~ 120 (328)
+.+++++|+++|++++..+. |++.|...+..+.+.++..
T Consensus 88 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 88 HVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 99999999999999988766 8888887766555555544
No 72
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=6e-24 Score=172.62 Aligned_cols=120 Identities=31% Similarity=0.377 Sum_probs=114.1
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 45 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 124 (169)
T 2y1l_E 45 ASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG 124 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDR 121 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~ 121 (328)
+.+++++|+++|++++..+. |++.|+..++.+++++|++.
T Consensus 125 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 125 HLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 99999999999999987765 99999999999999988763
No 73
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=8.2e-25 Score=192.14 Aligned_cols=157 Identities=18% Similarity=0.197 Sum_probs=101.5
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCC-CCcccCCCCCcHHHHHH-----HhCcHHHHHHHHHcCCCCCccCCCCCCHHHH
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGA-DVSYFDSDGLTPLMHAA-----KLGHANLVKTLLEAGAPWNALSSSNLSAGDF 76 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~ga-d~n~~d~~G~TpLh~Aa-----~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~ 76 (328)
+|.||||+||..|+.++|++||++|+ +++..|..|.||||+|+ ..++.+++++|++.|++++..+..|.||||+
T Consensus 110 ~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 189 (276)
T 4hbd_A 110 NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALML 189 (276)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 46677777777777777777777776 77777777777777777 5567777777777777777777777777777
Q ss_pred HHHcCCHHHHHHHHHcCCChhhhhhHHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhcC
Q 020270 77 AMDSGHQEVFEVLLNAGIQAELILGTIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSG 156 (328)
Q Consensus 77 A~~~g~~~~v~~Ll~~g~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~ 156 (328)
|+..|+.+++++|+++|++++..+. .|.||||.|+..+..+.
T Consensus 190 A~~~g~~~~v~~Ll~~gad~n~~d~--------------------------------------~G~TpLh~A~~~g~~~i 231 (276)
T 4hbd_A 190 AVSHGRVDVVKALLACEADVNVQDD--------------------------------------DGSTALMCACEHGHKEI 231 (276)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCT--------------------------------------TSCCHHHHHHHHTCHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCC--------------------------------------CCCCHHHHHHHCCCHHH
Confidence 7777777777777777777654332 23366666655555544
Q ss_pred CCceee-ecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC
Q 020270 157 GGHILN-IGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG 199 (328)
Q Consensus 157 ~~~iLe-~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g 199 (328)
.+.+++ .|.+..+.+. .+.+|+++++..++.+++++|++++
T Consensus 232 v~~Ll~~~gad~~~~d~--~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 232 AGLLLAVPSCDISLTDR--DGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHTSTTCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHhcCCCCCcCcCC--CCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 455555 5555554432 3444444444446777777777654
No 74
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=3.8e-24 Score=174.10 Aligned_cols=122 Identities=21% Similarity=0.203 Sum_probs=116.4
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 34 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN 113 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhccc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVS 123 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~ 123 (328)
+.+++++|+++|++++..+. |++.|+..++.+++++|++.+.
T Consensus 114 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 114 HVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence 99999999999999988766 9999999999999999998663
No 75
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.90 E-value=2.4e-25 Score=194.84 Aligned_cols=161 Identities=17% Similarity=0.029 Sum_probs=129.4
Q ss_pred chhHHHHHHHHc---CCHHHHHHHHhCCCCC-------cc----cCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCC
Q 020270 3 KEGEQLCEAARN---GDIDKVKALIGSGADV-------SY----FDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSS 68 (328)
Q Consensus 3 ~~~t~L~~Aa~~---g~~~~v~~LL~~gad~-------n~----~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~ 68 (328)
.|.||||+||.. |+.++|++||++|+++ |. .|..|.||||+|+..|+.++|++|+++|+++|.++.
T Consensus 53 ~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 132 (273)
T 2pnn_A 53 TGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAAN 132 (273)
T ss_dssp TCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBC
T ss_pred CCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccc
Confidence 688999999987 9999999999998753 32 566899999999999999999999999999999987
Q ss_pred --------------CCCCHHHHHHHcCCHHHHHHHHH---cCCChhhhhh----HHHhhccCCC---------CCcchhh
Q 020270 69 --------------SNLSAGDFAMDSGHQEVFEVLLN---AGIQAELILG----TIARAGNKNS---------NSNGDYL 118 (328)
Q Consensus 69 --------------~g~tpL~~A~~~g~~~~v~~Ll~---~g~~~~~~~~----~l~~a~~~~~---------~~~~~~L 118 (328)
.|.||||+|+..|+.+++++|++ +|++++..+. |||.|+..++ .+++++|
T Consensus 133 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~L 212 (273)
T 2pnn_A 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEI 212 (273)
T ss_dssp SGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHH
Confidence 79999999999999999999999 9999998776 9999999887 4677777
Q ss_pred hhcccccCCccccccchhhhhhccchHHHHHHHHhhcCCCceeeecc
Q 020270 119 EDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGGHILNIGF 165 (328)
Q Consensus 119 ~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~ 165 (328)
++.+..-.... ...+..+..|.||||+|+..+..+....+++.|+
T Consensus 213 l~~ga~~n~~~--~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 213 LILGAKLHPTL--KLEEITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp HHHHHHHCTTC--CGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHhhhhccccc--ccccccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 77553110000 0012345567799999987777555555555555
No 76
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=7.8e-24 Score=171.39 Aligned_cols=121 Identities=23% Similarity=0.269 Sum_probs=115.7
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (167)
T 3v31_A 34 EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN 113 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
+.+++++|+++|++++..+. |++.|+..++.+++++|.+..
T Consensus 114 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 114 HVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 99999999999999988766 999999999999999998865
No 77
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=8.9e-24 Score=174.01 Aligned_cols=95 Identities=31% Similarity=0.373 Sum_probs=91.6
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALS-SSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d-~~g~tpL~~A~~~g 81 (328)
+|.||||.||..|+.++++.||+ |+++|.+|..|.||||+|+..|+.+++++|+++|+++|.++ ..|+||||+|+..|
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 67899999999999999999999 99999999999999999999999999999999999999998 88999999999999
Q ss_pred CHHHHHHHHHcCCChhh
Q 020270 82 HQEVFEVLLNAGIQAEL 98 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~ 98 (328)
+.+++++|+++|++++.
T Consensus 122 ~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 122 RPEVVEALVELGADIEV 138 (183)
T ss_dssp CHHHHHHHHHHTCCTTC
T ss_pred cHHHHHHHHHcCCCCcC
Confidence 99999999999998753
No 78
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=1e-23 Score=174.72 Aligned_cols=120 Identities=23% Similarity=0.191 Sum_probs=114.8
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (192)
T 2rfm_A 67 EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGR 146 (192)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
.+++++|+++|++++..+. |++.|+..++.+++++|++..
T Consensus 147 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 147 SEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999988765 999999999999999988743
No 79
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=7.8e-24 Score=173.54 Aligned_cols=121 Identities=25% Similarity=0.229 Sum_probs=114.5
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||.||..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+
T Consensus 38 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 117 (179)
T 3f6q_A 38 HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQ 117 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhccc
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVS 123 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~ 123 (328)
.+++++|+++|++++..+. |++.|...++.+.+++|.+.+.
T Consensus 118 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 118 DQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp HHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999988766 9999998888888888887653
No 80
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=1.5e-25 Score=196.77 Aligned_cols=160 Identities=16% Similarity=0.101 Sum_probs=133.2
Q ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCC--CcccCCCCCcHHHHHHHhCcHHHHHHHHHcCC-CCCccCCCCCCHHHHHH--
Q 020270 4 EGEQLCEAARNGDIDKVKALIGSGAD--VSYFDSDGLTPLMHAAKLGHANLVKTLLEAGA-PWNALSSSNLSAGDFAM-- 78 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~~v~~LL~~gad--~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga-~~n~~d~~g~tpL~~A~-- 78 (328)
..+++|.|+..|+.+.++.+++.+++ +|.+|..|.||||+|+..|+.++|++|+++|+ +++..|..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 45788999999999999999998766 89999999999999999999999999999998 99999999999999999
Q ss_pred ---HcCCHHHHHHHHHcCCChhhhhhHHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHhhc
Q 020270 79 ---DSGHQEVFEVLLNAGIQAELILGTIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICS 155 (328)
Q Consensus 79 ---~~g~~~~v~~Ll~~g~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~~~ 155 (328)
..++.+++++|++.|...+.. +..+.||||.|+..+..+
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~~~~--------------------------------------~~~g~tpLh~A~~~g~~~ 197 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNINAKA--------------------------------------SQAGQTALMLAVSHGRVD 197 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTTCCC--------------------------------------TTTCCCHHHHHHHTTCHH
T ss_pred HhhhhhhHHHHHHHHHcCCCcccc--------------------------------------CCCCCCHHHHHHHcCCHH
Confidence 668899999999998665321 122459999998877766
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHH-cCCCCC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLR-TGWGEK 203 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~-~g~~~~ 203 (328)
..+.+++.|.+....+. .+.+|+++++..++.+++++|++ .|++..
T Consensus 198 ~v~~Ll~~gad~n~~d~--~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~ 244 (276)
T 4hbd_A 198 VVKALLACEADVNVQDD--DGSTALMCACEHGHKEIAGLLLAVPSCDIS 244 (276)
T ss_dssp HHHHHHHTTCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHTSTTCCTT
T ss_pred HHHHHHhCCCCCCCCCC--CCCCHHHHHHHCCCHHHHHHHHhcCCCCCc
Confidence 66777777777666553 56677666666699999999999 787654
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=2.2e-23 Score=179.08 Aligned_cols=121 Identities=21% Similarity=0.241 Sum_probs=113.2
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.+.||||.|+..|+.++|+.||++|+++|.+|..|.||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN 115 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh-----HHHhh--ccCCCCCcchhhhhccc
Q 020270 83 QEVFEVLLNAGIQAELILG-----TIARA--GNKNSNSNGDYLEDRVS 123 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~-----~l~~a--~~~~~~~~~~~L~~~~~ 123 (328)
.+++++|+++|++++..+. |++.| +..++.+++++|+....
T Consensus 116 ~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 116 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 163 (239)
T ss_dssp HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhh
Confidence 9999999999999987763 99988 77888999999998663
No 82
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=1.2e-23 Score=169.28 Aligned_cols=120 Identities=20% Similarity=0.147 Sum_probs=112.7
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||.|+. |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|
T Consensus 36 ~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 114 (162)
T 1ihb_A 36 GFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG 114 (162)
T ss_dssp TTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 357899999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCC-hhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 82 HQEVFEVLLNAGIQ-AELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~-~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
+.+++++|+++|++ ++..+. |++.|+..++.+++++|++.+
T Consensus 115 ~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 115 HLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 99999999999998 465554 999999999999999998754
No 83
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=9e-24 Score=182.15 Aligned_cols=104 Identities=29% Similarity=0.326 Sum_probs=96.7
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALS-SSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d-~~g~tpL~~A~~~g 81 (328)
+|.||||.||..|+.++|+.||+ |+++|.+|..|.||||+||..|+.++|++|+++|+++|.++ ..|+||||+|+..|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 68899999999999999999999 99999999999999999999999999999999999999998 78999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAG 107 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~ 107 (328)
+.+++++|+++|++++..+. |++.|+
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAR 152 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 99999999999999876544 555544
No 84
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.89 E-value=2.1e-23 Score=166.84 Aligned_cols=118 Identities=21% Similarity=0.222 Sum_probs=112.0
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||. |..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|
T Consensus 34 ~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 112 (156)
T 1bd8_A 34 RFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG 112 (156)
T ss_dssp TTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred CCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC
Confidence 357899999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDR 121 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~ 121 (328)
+.+++++|+++ ++++..+. |++.|+..++.+++++|+++
T Consensus 113 ~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 113 HTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred hHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999 88887765 99999999999999998764
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=7e-24 Score=175.20 Aligned_cols=120 Identities=19% Similarity=0.188 Sum_probs=109.7
Q ss_pred chhHHHHHHHHcCCH----HHHHHHHhCCCCCcccCCCCCcHHHHHHHhCc------HHHHHHHHHcCCCCCccCCCCC-
Q 020270 3 KEGEQLCEAARNGDI----DKVKALIGSGADVSYFDSDGLTPLMHAAKLGH------ANLVKTLLEAGAPWNALSSSNL- 71 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~----~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~------~~~v~~Ll~~ga~~n~~d~~g~- 71 (328)
.|.||||+|+..|+. +++++||++|+|+|.+|..|+||||+|+..|+ .+++++|+++||++|.+|..|.
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t 116 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKI 116 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTB
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCc
Confidence 488999999999986 58999999999999999999999999999987 6899999999999999999999
Q ss_pred CHHHHHHHcC-----CHHHHHHHHH-cCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 72 SAGDFAMDSG-----HQEVFEVLLN-AGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 72 tpL~~A~~~g-----~~~~v~~Ll~-~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
||||+|+..+ +.+++++|++ +|++++..+. ||+.|+..++.+.+++|....
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999944 4579999999 9999998887 999999999999998887643
No 86
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=1.1e-24 Score=187.19 Aligned_cols=117 Identities=17% Similarity=0.185 Sum_probs=72.1
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||.|+..|+.+.++.||++|++++. +..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 478999999999999999999999999986 4789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhh
Q 020270 83 QEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLED 120 (328)
Q Consensus 83 ~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~ 120 (328)
.+++++|+++|++++..+. |||.|+..++.+++++|++
T Consensus 83 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 83 TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999876543 5555555555555555554
No 87
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.89 E-value=1.4e-24 Score=195.38 Aligned_cols=177 Identities=16% Similarity=0.026 Sum_probs=130.1
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCc---HHHHHHHHHcC-CCCCccCCCCCCHHHHH
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGH---ANLVKTLLEAG-APWNALSSSNLSAGDFA 77 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~---~~~v~~Ll~~g-a~~n~~d~~g~tpL~~A 77 (328)
..|.||||+||..|+.++|++||++|+++|.+|..|.||||+|+..|+ .++++.|++.+ ++++.+|..|+||||+|
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A 208 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHI 208 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHH
Confidence 368999999999999999999999999999999999999999999998 78899999986 78999999999999999
Q ss_pred HH----cCCHHHHHHHHHcCCChhhhhh--HHH----------hhccCCCCCcchhhhhcccccCCccccccchhhhhhc
Q 020270 78 MD----SGHQEVFEVLLNAGIQAELILG--TIA----------RAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAW 141 (328)
Q Consensus 78 ~~----~g~~~~v~~Ll~~g~~~~~~~~--~l~----------~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~ 141 (328)
+. .|+.+++++|++.++....... .+. .+......+.+.+... ...++..+.+..+..|
T Consensus 209 ~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~-----~~~Ll~~~~n~~d~~G 283 (327)
T 1sw6_A 209 IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD-----LKWIIANMLNAQDSNG 283 (327)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS-----HHHHHHHTTTCCCTTS
T ss_pred HHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH-----HHHHHHhCCCCCCCCC
Confidence 99 8999999999987543221110 000 0000011111111111 1112333566667788
Q ss_pred cchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEee
Q 020270 142 EKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTIL 185 (328)
Q Consensus 142 ~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~ 185 (328)
.||||+|+..+..+..+.+++.|.+..+.+. .+.+|+++++.
T Consensus 284 ~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~--~G~TpL~~A~~ 325 (327)
T 1sw6_A 284 DTCLNIAARLGNISIVDALLDYGADPFIANK--SGLRPVDFGAG 325 (327)
T ss_dssp CCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT--TSCCGGGGTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCC--CCCCHHHHHHh
Confidence 8999999998887777778888888776653 56667655543
No 88
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.88 E-value=2.9e-23 Score=180.12 Aligned_cols=121 Identities=19% Similarity=0.115 Sum_probs=113.6
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccC--------------CCCCcHHHHHHHhCcHHHHHHHHH---cCCCCCc
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFD--------------SDGLTPLMHAAKLGHANLVKTLLE---AGAPWNA 65 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d--------------~~G~TpLh~Aa~~g~~~~v~~Ll~---~ga~~n~ 65 (328)
.|.||||+||..|+.++|++||++|++++.++ ..|.||||+|+..|+.++|++|++ +|+++|.
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~ 171 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR 171 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc
Confidence 68899999999999999999999999999998 689999999999999999999999 9999999
Q ss_pred cCCCCCCHHHHHHHcCC---------HHHHHHHHHcCCCh-------hhhhh----HHHhhccCCCCCcchhhhhccc
Q 020270 66 LSSSNLSAGDFAMDSGH---------QEVFEVLLNAGIQA-------ELILG----TIARAGNKNSNSNGDYLEDRVS 123 (328)
Q Consensus 66 ~d~~g~tpL~~A~~~g~---------~~~v~~Ll~~g~~~-------~~~~~----~l~~a~~~~~~~~~~~L~~~~~ 123 (328)
+|..|+||||+|+..++ .+++++|+++|+++ +..+. ||+.|+..++.+++++|++++.
T Consensus 172 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 172 QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 99999999999999888 79999999999998 44544 9999999999999999998764
No 89
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.8e-23 Score=177.30 Aligned_cols=121 Identities=21% Similarity=0.223 Sum_probs=109.1
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEA-GAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpL~~A~~~g 81 (328)
+|.||||.||..|+.++|+.||++|+++|.+|..|.||||+||..|+.++|++|+++ |+++|.+|..|.||||+|+..|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 568999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhccc
Q 020270 82 HQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVS 123 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~ 123 (328)
+.+++++|+++|++++..+. |++.|+..+..++++.|.....
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred CHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 99999999999999988776 9999999888777777776543
No 90
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=1.2e-24 Score=185.82 Aligned_cols=142 Identities=20% Similarity=0.104 Sum_probs=115.6
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccC-CCCCCHHHHH--H
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALS-SSNLSAGDFA--M 78 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d-~~g~tpL~~A--~ 78 (328)
..|.||||+||..|+.++|++||++|+++|.+|..|.||||+|+..|+.++|++|+++|++++..+ ..|.||||+| +
T Consensus 52 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~ 131 (229)
T 2vge_A 52 EEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPY 131 (229)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999999999999999999987 5999999999 9
Q ss_pred HcCCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHh
Q 020270 79 DSGHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI 153 (328)
Q Consensus 79 ~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~ 153 (328)
..|+.+++++|+++|++++..+. +++.++... ..++|+..+. +.+.+..+..|.||||+|+..+.
T Consensus 132 ~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~---~~~~ll~~ga-------~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 132 REGYADCATYLADVEQSMGLMNSGAVYALWDYSAEF---GDELSFREGE-------SVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp STTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSS---TTBCCBCTTC-------EEEEEESSCTTCSSEEEEEETTE
T ss_pred hcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcc---ccccCccccc-------cccccccCCCcccHHHHHHHcCC
Confidence 99999999999999999988765 444333332 2234433221 11233445567799999955544
No 91
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=7.1e-23 Score=155.34 Aligned_cols=99 Identities=38% Similarity=0.503 Sum_probs=95.5
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
++|.||||.||..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNG 86 (115)
T ss_dssp CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCChhhhh
Q 020270 82 HQEVFEVLLNAGIQAELIL 100 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~~~~~~ 100 (328)
+.+++++|+++|++++..+
T Consensus 87 ~~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 87 HHEIVKLLDAKGADVNARS 105 (115)
T ss_dssp CHHHHHHHHTTSSSHHHHS
T ss_pred CHHHHHHHHHcCCCCCcCC
Confidence 9999999999999998653
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.1e-22 Score=178.95 Aligned_cols=135 Identities=19% Similarity=0.194 Sum_probs=117.8
Q ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCCCcc------cCCCCCcHHHHHHHh---CcHHHHHHHHHcCCCCCccCCCCCCHH
Q 020270 4 EGEQLCEAARNGDIDKVKALIGSGADVSY------FDSDGLTPLMHAAKL---GHANLVKTLLEAGAPWNALSSSNLSAG 74 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~~v~~LL~~gad~n~------~d~~G~TpLh~Aa~~---g~~~~v~~Ll~~ga~~n~~d~~g~tpL 74 (328)
..++|+.|+..|+.+.|+.|++.|++++. .+..|.||||+|+.. |+.+++++|+++|+++|.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 35789999999999999999999999998 688999999999997 899999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHH
Q 020270 75 DFAMDSGHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHA 150 (328)
Q Consensus 75 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~ 150 (328)
|+|+..|+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.. .+.||||+|+.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------------~g~tpLh~A~~ 295 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------------TFAFPLHVDYS 295 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------------TTSSCCC----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------------CCCChhHHHHh
Confidence 999999999999999999999988776 99999999999999999875421 34699999976
Q ss_pred HHh
Q 020270 151 KAI 153 (328)
Q Consensus 151 ~~~ 153 (328)
.+.
T Consensus 296 ~g~ 298 (301)
T 2b0o_E 296 WVI 298 (301)
T ss_dssp ---
T ss_pred cCC
Confidence 554
No 93
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=3.1e-22 Score=156.53 Aligned_cols=93 Identities=20% Similarity=0.203 Sum_probs=90.1
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSD-GLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~-G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
..|.||||.|+. |+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 43 ~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 43 RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHH
T ss_pred CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 357899999999 9999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCC
Q 020270 81 GHQEVFEVLLNAGIQ 95 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~ 95 (328)
++.+++++|+++|++
T Consensus 122 ~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 122 GHRDIARYLHAATGD 136 (136)
T ss_dssp TCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999985
No 94
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=5.6e-23 Score=169.76 Aligned_cols=105 Identities=14% Similarity=0.103 Sum_probs=91.5
Q ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCCcHHHHHHHhCcH----HHHHHHHHcCCCCCccCCCCCCHHHHHH
Q 020270 4 EGEQLCEAARNGDIDKVKALIGSGADVSYFD-SDGLTPLMHAAKLGHA----NLVKTLLEAGAPWNALSSSNLSAGDFAM 78 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d-~~G~TpLh~Aa~~g~~----~~v~~Ll~~ga~~n~~d~~g~tpL~~A~ 78 (328)
+-++|+.||+.|+.+.++.+++.+ ++..+ ..|+||||+|+.+|+. +++++|+++||++|.+|..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 457899999999999999999876 45555 6799999999999975 5999999999999999999999999999
Q ss_pred HcCC------HHHHHHHHHcCCChhhhhh-----HHHhhccCC
Q 020270 79 DSGH------QEVFEVLLNAGIQAELILG-----TIARAGNKN 110 (328)
Q Consensus 79 ~~g~------~~~v~~Ll~~g~~~~~~~~-----~l~~a~~~~ 110 (328)
..++ .+++++|+++|++++..+. |||.|+..+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCC
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcC
Confidence 9987 5889999999999987654 666666633
No 95
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=2e-21 Score=151.92 Aligned_cols=91 Identities=32% Similarity=0.445 Sum_probs=88.3
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.|.||||.||..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 46 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~ 125 (136)
T 2jab_A 46 YGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN 125 (136)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcC
Q 020270 83 QEVFEVLLNAG 93 (328)
Q Consensus 83 ~~~v~~Ll~~g 93 (328)
.+++++|++.|
T Consensus 126 ~~~~~~Ll~~G 136 (136)
T 2jab_A 126 EDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHcC
Confidence 99999999876
No 96
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=1e-21 Score=178.66 Aligned_cols=119 Identities=21% Similarity=0.216 Sum_probs=114.0
Q ss_pred hhHHHHHHHHc-CCHHHHHHHHhCCCCCcccC--CCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 4 EGEQLCEAARN-GDIDKVKALIGSGADVSYFD--SDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 4 ~~t~L~~Aa~~-g~~~~v~~LL~~gad~n~~d--~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
+.|+||.|+.. |+.++|+.||++|+++|..+ ..|.||||+|+..|+.++|++|+++|+++|..|..|+||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 46899999999 99999999999999999998 8899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhcc
Q 020270 81 GHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRV 122 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~ 122 (328)
|+.+++++|+++|++++..+. ||+.|+..++.+++++|+...
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999988776 999999999999999998765
No 97
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.86 E-value=3.7e-21 Score=144.84 Aligned_cols=88 Identities=43% Similarity=0.594 Sum_probs=85.8
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
+++.||||.||..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG 101 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHH
Q 020270 82 HQEVFEVL 89 (328)
Q Consensus 82 ~~~~v~~L 89 (328)
+.+++++|
T Consensus 102 ~~~~~~~L 109 (110)
T 2zgd_A 102 NEDLAEIL 109 (110)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 99999987
No 98
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=1e-21 Score=157.31 Aligned_cols=99 Identities=22% Similarity=0.183 Sum_probs=88.2
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCc-HHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLT-PLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~T-pLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
..|.||||+|+ .|+.++|++|+++|++++.+|..|.| |||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..
T Consensus 43 ~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 43 SYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHH
T ss_pred CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHh
Confidence 35789999985 99999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhhhh
Q 020270 81 GHQEVFEVLLNAGIQAELILG 101 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~~~ 101 (328)
|+.+++++|+++|++++..+.
T Consensus 122 ~~~~~v~~Ll~~ga~~~~~~~ 142 (156)
T 1bi7_B 122 GHRDVARYLRAAAGGTRGSNH 142 (156)
T ss_dssp TCHHHHHHHSSCC--------
T ss_pred CHHHHHHHHHHcCCCCCccCc
Confidence 999999999999999876443
No 99
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=8.2e-21 Score=145.60 Aligned_cols=93 Identities=44% Similarity=0.560 Sum_probs=90.8
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGH 82 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~ 82 (328)
.+.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 34 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 113 (126)
T 1n0r_A 34 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 113 (126)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC
Q 020270 83 QEVFEVLLNAGIQ 95 (328)
Q Consensus 83 ~~~v~~Ll~~g~~ 95 (328)
.+++++|+++|++
T Consensus 114 ~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 114 LEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 100
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=4.9e-21 Score=168.17 Aligned_cols=95 Identities=22% Similarity=0.185 Sum_probs=91.6
Q ss_pred cchhHHHHHHHHc---CCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Q 020270 2 EKEGEQLCEAARN---GDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAM 78 (328)
Q Consensus 2 ~~~~t~L~~Aa~~---g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~ 78 (328)
+.|.||||+||.. |+.++|++||++|+++|.+|..|.||||+|+..|+.++|++|+++||++|.+|..|.||||+|+
T Consensus 167 ~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 246 (278)
T 1dcq_A 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 246 (278)
T ss_dssp STTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHH
Confidence 3588999999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCh
Q 020270 79 DSGHQEVFEVLLNAGIQA 96 (328)
Q Consensus 79 ~~g~~~~v~~Ll~~g~~~ 96 (328)
..|+.+++++|+++|++.
T Consensus 247 ~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 247 RLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HTTCHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCCCC
Confidence 999999999999998864
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=1.2e-20 Score=165.77 Aligned_cols=120 Identities=18% Similarity=0.208 Sum_probs=112.2
Q ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCCCc------ccCCCCCcHHHHHHHh---CcHHHHHHHHHcCCCCCccCCCCCCHH
Q 020270 4 EGEQLCEAARNGDIDKVKALIGSGADVS------YFDSDGLTPLMHAAKL---GHANLVKTLLEAGAPWNALSSSNLSAG 74 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~~v~~LL~~gad~n------~~d~~G~TpLh~Aa~~---g~~~~v~~Ll~~ga~~n~~d~~g~tpL 74 (328)
..++|+.|+..|+.+.++.+++.|++++ ..|..|.||||+|+.. |+.+++++|+++|+++|.+|..|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 3578999999999999999999999954 4578999999999999 899999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhccc
Q 020270 75 DFAMDSGHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVS 123 (328)
Q Consensus 75 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~ 123 (328)
|+|+..|+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999999998876 9999999999999999998764
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.83 E-value=5.3e-23 Score=187.82 Aligned_cols=145 Identities=15% Similarity=0.063 Sum_probs=112.1
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCC---cccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC---CccCCCCCCHHHH
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADV---SYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPW---NALSSSNLSAGDF 76 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~---n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~---n~~d~~g~tpL~~ 76 (328)
++.||||.||+.|+.++|++|+++|++. +..+..|.||||+||..|+.++|++|+++|+++ +..+.. .||||+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 3579999999999999999999999832 233456789999999999999999999999863 222222 899999
Q ss_pred HHHcCCHHHHHHHHHcCCChhh--hhh----HHHhhc-cCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHH
Q 020270 77 AMDSGHQEVFEVLLNAGIQAEL--ILG----TIARAG-NKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAH 149 (328)
Q Consensus 77 A~~~g~~~~v~~Ll~~g~~~~~--~~~----~l~~a~-~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~ 149 (328)
|+..|+.+++++|+++|++++. .+. ||+.|+ ..|+.+++++|++.+. .+.||||.|+
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga----------------~~~taL~~Aa 233 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV----------------MLAYAEIHEF 233 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH----------------HHHHHHHCTT
T ss_pred HHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC----------------ccchHHHHHH
Confidence 9999999999999999999765 443 999999 9999999999987431 1459999986
Q ss_pred HHHhhcCCCceeeec
Q 020270 150 AKAICSGGGHILNIG 164 (328)
Q Consensus 150 ~~~~~~~~~~iLe~g 164 (328)
..+..+....+++.|
T Consensus 234 ~~g~~evv~lL~~~g 248 (376)
T 2aja_A 234 EYGEKYVNPFIARHV 248 (376)
T ss_dssp TTTTTTHHHHHHHHH
T ss_pred HCCCHHHHHHHHhcC
Confidence 665544333334433
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=7.2e-21 Score=180.56 Aligned_cols=120 Identities=19% Similarity=0.195 Sum_probs=111.8
Q ss_pred hhHHHHHHHHcCCHHHHHHHHhCCCCCccc------CCCCCcHHHHHHH---hCcHHHHHHHHHcCCCCCccCCCCCCHH
Q 020270 4 EGEQLCEAARNGDIDKVKALIGSGADVSYF------DSDGLTPLMHAAK---LGHANLVKTLLEAGAPWNALSSSNLSAG 74 (328)
Q Consensus 4 ~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~------d~~G~TpLh~Aa~---~g~~~~v~~Ll~~ga~~n~~d~~g~tpL 74 (328)
..++||.|+..|+.+.|+.||++|+|+|.+ |..|.||||+||. .|+.++|++|+++||++|.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 347899999999999999999999999988 8899999999976 8999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCChhhhhh----HHHhhccCCCCCcchhhhhccc
Q 020270 75 DFAMDSGHQEVFEVLLNAGIQAELILG----TIARAGNKNSNSNGDYLEDRVS 123 (328)
Q Consensus 75 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~~~~~~~L~~~~~ 123 (328)
|+|+..|+.+++++|+++|++++..+. ||+.|+..++.+++++|++.+.
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 999999999999999999999998876 9999999999999999998653
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=5.8e-21 Score=169.60 Aligned_cols=107 Identities=22% Similarity=0.137 Sum_probs=94.0
Q ss_pred chhHHHHHHHHc---CCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Q 020270 3 KEGEQLCEAARN---GDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMD 79 (328)
Q Consensus 3 ~~~t~L~~Aa~~---g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~ 79 (328)
.|.||||+|+.. |+.++|++||++|+++|.+|..|.||||+|+..|+.++|++|+++||+++.+|..|.||||+|+.
T Consensus 189 ~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~ 268 (301)
T 2b0o_E 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 268 (301)
T ss_dssp CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 578999999997 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCChhhhhhHHHhhccCCC
Q 020270 80 SGHQEVFEVLLNAGIQAELILGTIARAGNKNS 111 (328)
Q Consensus 80 ~g~~~~v~~Ll~~g~~~~~~~~~l~~a~~~~~ 111 (328)
.|+.+++++|+++|++.. ..||+.|+..++
T Consensus 269 ~~~~~iv~~Ll~~ga~~g--~tpLh~A~~~g~ 298 (301)
T 2b0o_E 269 KHHKECEELLEQAQAGTF--AFPLHVDYSWVI 298 (301)
T ss_dssp HTCHHHHHHHHHHHHHTT--SSCCC-------
T ss_pred cCCHHHHHHHHHhcCCCC--CChhHHHHhcCC
Confidence 999999999999987631 237888877664
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=3.3e-20 Score=175.97 Aligned_cols=102 Identities=24% Similarity=0.208 Sum_probs=90.1
Q ss_pred chhHHHHHHHH---cCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Q 020270 3 KEGEQLCEAAR---NGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMD 79 (328)
Q Consensus 3 ~~~t~L~~Aa~---~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~ 79 (328)
.|.||||+||. .|+.++|++||++|+|+|.+|..|.||||+|+..|+.++|++|+++||++|.+|..|.||||+|+.
T Consensus 170 ~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 170 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 249 (497)
T ss_dssp SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHH
T ss_pred ccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 68999999966 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCChhhhhhHHHhh
Q 020270 80 SGHQEVFEVLLNAGIQAELILGTIARA 106 (328)
Q Consensus 80 ~g~~~~v~~Ll~~g~~~~~~~~~l~~a 106 (328)
.|+.+++++|+++|++++.. |+|.+
T Consensus 250 ~~~~~~~~~Ll~~ga~~~~~--~~h~~ 274 (497)
T 3lvq_E 250 KHHKECEELLEQAQAGTFAF--PLHVD 274 (497)
T ss_dssp TTCHHHHHHHHHTCC------------
T ss_pred cCCHHHHHHHHHhCCCCCCC--cceee
Confidence 99999999999999998763 44443
No 106
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.81 E-value=1.9e-20 Score=146.40 Aligned_cols=117 Identities=20% Similarity=0.166 Sum_probs=101.1
Q ss_pred CCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhh----H
Q 020270 27 GADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILG----T 102 (328)
Q Consensus 27 gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~ 102 (328)
|+|+ .+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+. |
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 6788 7899999999999999999999999999999999999999999999999999999999999999987765 9
Q ss_pred HHhhccCCCCCcchhhhhcccccCCccccccchhhhhhccchHHHHHHHHh
Q 020270 103 IARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAI 153 (328)
Q Consensus 103 l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~~~~~~~tpL~~a~~~~~ 153 (328)
|+.|+..++.+++++|++.+. +.+..+..+.|||++|...+.
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga---------~~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGA---------SRNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCGGGGCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCC---------CCCCCCCCCCCHHHHHhhccH
Confidence 999999999999999997542 334445566799999865544
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.79 E-value=6e-20 Score=158.13 Aligned_cols=93 Identities=29% Similarity=0.296 Sum_probs=85.9
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHH---
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFD-SDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAM--- 78 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~--- 78 (328)
.|.||||+||..|+.++|++||++|+++|.+| ..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+
T Consensus 76 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 76 NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH
Confidence 58899999999999999999999999999999 78999999999999999999999999999999999999999988
Q ss_pred -------------HcCCHHHHHHHHHcCCC
Q 020270 79 -------------DSGHQEVFEVLLNAGIQ 95 (328)
Q Consensus 79 -------------~~g~~~~v~~Ll~~g~~ 95 (328)
..|+.+++++|++++.+
T Consensus 156 ~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 156 KTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp TTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred hccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 55778888888876544
No 108
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.79 E-value=1e-19 Score=139.50 Aligned_cols=79 Identities=29% Similarity=0.344 Sum_probs=75.5
Q ss_pred chhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 3 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 3 ~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
.|.||||+||..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|...+
T Consensus 39 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 39 GGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp TSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999995443
No 109
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=9.2e-20 Score=154.40 Aligned_cols=98 Identities=22% Similarity=0.186 Sum_probs=83.9
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGS-GADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~-gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
..|.||||+||..|+.++|++||++ |+++|.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 104 KAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcch
Confidence 3578999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCChhhh
Q 020270 81 GHQEVFEVLLNAGIQAELI 99 (328)
Q Consensus 81 g~~~~v~~Ll~~g~~~~~~ 99 (328)
++.++++.|++.|+..++.
T Consensus 184 ~~~~~l~~l~~~~~~~~~~ 202 (222)
T 3ehr_A 184 ACASLLKKKQGTDAVRTLS 202 (222)
T ss_dssp HHHHHHC------------
T ss_pred hHHHHHHHHhccchhhhcc
Confidence 9999999999999887653
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=8.5e-19 Score=159.48 Aligned_cols=94 Identities=28% Similarity=0.386 Sum_probs=90.1
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSG 81 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g 81 (328)
..|.||||+||..|+.++|++||++|+++|.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g 312 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCC
Q 020270 82 HQEVFEVLLNAGIQ 95 (328)
Q Consensus 82 ~~~~v~~Ll~~g~~ 95 (328)
+.+++++|+.++.+
T Consensus 313 ~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 313 NADIVTLLRLAKMR 326 (368)
T ss_dssp CHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999988754
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.77 E-value=9.8e-21 Score=172.83 Aligned_cols=173 Identities=13% Similarity=-0.039 Sum_probs=130.8
Q ss_pred hhHHHHHHHH-cCCHHHHHHHHhCCCCCcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC---CccCCCCCCHHHHHHH
Q 020270 4 EGEQLCEAAR-NGDIDKVKALIGSGADVSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPW---NALSSSNLSAGDFAMD 79 (328)
Q Consensus 4 ~~t~L~~Aa~-~g~~~~v~~LL~~gad~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~---n~~d~~g~tpL~~A~~ 79 (328)
+.+.++.|+. .++.+.+++|+++|++. .||||+||..|+.++|++|+++|+.. +..+..|.||||+|+.
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~ 137 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 137 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHH
Confidence 3467777776 57889999999887654 49999999999999999999999832 2344567899999999
Q ss_pred cCCHHHHHHHHHcCCCh---hhh--hh-HHHhhccCCCCCcchhhhhcccccCCccccccchh--hhhhccchHHHHH-H
Q 020270 80 SGHQEVFEVLLNAGIQA---ELI--LG-TIARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSKA--IMMAWEKPLMEAH-A 150 (328)
Q Consensus 80 ~g~~~~v~~Ll~~g~~~---~~~--~~-~l~~a~~~~~~~~~~~L~~~~~~~~~~l~~~~~~~--~~~~~~tpL~~a~-~ 150 (328)
.|+.+++++|+++|+++ +.. +. ||+.|+..|+.+++++|++.+. +.+. .+..+.||||.|+ .
T Consensus 138 ~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga---------~~~~~~~d~~g~TpL~~Aa~~ 208 (376)
T 2aja_A 138 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAP---------TEATAMIQAENYYAFRWAAVG 208 (376)
T ss_dssp TTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCG---------GGHHHHHHHHHHHHHHHHHST
T ss_pred cCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCC---------ccchhccCCCCCCHHHHHHHH
Confidence 99999999999999762 222 22 9999999999999999998643 2222 5556779999997 7
Q ss_pred HHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC
Q 020270 151 KAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG 201 (328)
Q Consensus 151 ~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~ 201 (328)
.+..+..+.+++.|. .+.+|+++++..++.+++++|++.|++
T Consensus 209 ~G~~eiv~~Ll~~ga---------~~~taL~~Aa~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 209 RGHHNVINFLLDCPV---------MLAYAEIHEFEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp TCCHHHHHHHTTSHH---------HHHHHHHCTTTTTTTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCC---------ccchHHHHHHHCCCHHHHHHHHhcCcc
Confidence 666444444444331 245666666666999999999998854
No 112
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.77 E-value=8.2e-19 Score=144.14 Aligned_cols=84 Identities=29% Similarity=0.263 Sum_probs=78.4
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 020270 2 EKEGEQLCEAARNGDIDKVKALIGSGADVSYFD-SDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDS 80 (328)
Q Consensus 2 ~~~~t~L~~Aa~~g~~~~v~~LL~~gad~n~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~ 80 (328)
..|.||||+|+..|+.++|++|+++|+++|.+| ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 74 ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 368899999999999999999999999999998 8899999999999999999999999999999999999999999986
Q ss_pred CCHHH
Q 020270 81 GHQEV 85 (328)
Q Consensus 81 g~~~~ 85 (328)
++.+.
T Consensus 154 ~~~~~ 158 (183)
T 3deo_A 154 LKTTP 158 (183)
T ss_dssp HHTCC
T ss_pred ccCcc
Confidence 55433
No 113
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=7e-19 Score=128.02 Aligned_cols=87 Identities=33% Similarity=0.365 Sum_probs=81.3
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhh----HHHhhccCCC
Q 020270 36 DGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILG----TIARAGNKNS 111 (328)
Q Consensus 36 ~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~~~~~ 111 (328)
+|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..+. |++.|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 489999999999999999999999999999999999999999999999999999999999988776 9999999999
Q ss_pred CCcchhhhhcc
Q 020270 112 NSNGDYLEDRV 122 (328)
Q Consensus 112 ~~~~~~L~~~~ 122 (328)
.+++++|++.+
T Consensus 81 ~~~~~~Ll~~g 91 (93)
T 1n0q_A 81 LEVVKLLLEAG 91 (93)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999998754
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.69 E-value=1.2e-17 Score=126.22 Aligned_cols=91 Identities=32% Similarity=0.356 Sum_probs=86.1
Q ss_pred ccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhh----HHHhhc
Q 020270 32 YFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILG----TIARAG 107 (328)
Q Consensus 32 ~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~a~ 107 (328)
.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+. ||+.|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999999987765 999999
Q ss_pred cCCCCCcchhhhhcc
Q 020270 108 NKNSNSNGDYLEDRV 122 (328)
Q Consensus 108 ~~~~~~~~~~L~~~~ 122 (328)
..++.+++++|++.+
T Consensus 84 ~~~~~~~~~~Ll~~g 98 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKG 98 (115)
T ss_dssp TTTCHHHHHHHHTTS
T ss_pred HCCCHHHHHHHHHcC
Confidence 999999999998854
No 115
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=7.3e-17 Score=121.15 Aligned_cols=89 Identities=25% Similarity=0.272 Sum_probs=79.3
Q ss_pred CcccCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhh----HHHh
Q 020270 30 VSYFDSDGLTPLMHAAKLGHANLVKTLLEAGAPWNALSSSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILG----TIAR 105 (328)
Q Consensus 30 ~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~l~~ 105 (328)
++..|.+|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+. |++.
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 455678899999999999999999999999999999999999999999999999999999999999987765 9999
Q ss_pred hccCCCCCcchhh
Q 020270 106 AGNKNSNSNGDYL 118 (328)
Q Consensus 106 a~~~~~~~~~~~L 118 (328)
|+..++.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999888777765
No 116
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.45 E-value=6.7e-13 Score=113.24 Aligned_cols=184 Identities=26% Similarity=0.439 Sum_probs=130.8
Q ss_pred cccchhhhhhccchHHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEe
Q 020270 131 DSDSKAIMMAWEKPLMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIF 210 (328)
Q Consensus 131 ~~~~~~~~~~~~tpL~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~ 210 (328)
....+..+..|+++++............+||++|+|+|..........+...++++..+.+++.+.+.......++.+..
T Consensus 35 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~ 114 (236)
T 1zx0_A 35 RILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLK 114 (236)
T ss_dssp EETTEEEEEGGGHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEE
T ss_pred hccchHHHHHHHHHHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEe
Confidence 33455677889999998877766667789999999999865555444455788999999999999886543346788889
Q ss_pred cccchhc--cCCCCCCEEEEecCccch-----hhHHHHHHHHhhccCCCcEEEEeccccCC------cchhHHhhhHHHH
Q 020270 211 GRWQDNL--SQLESYDGIFFDTYGEYY-----EDLREFHQHLPKLLKPGGIYSYFNGLCGG------NAFFHVVYCHLVS 277 (328)
Q Consensus 211 g~w~~~~--~~~~~fD~i~~d~f~e~~-----~~l~~~~~~~~~lL~~gG~~~~~~~~g~~------~~~~~~~y~~~~~ 277 (328)
+++.+.. ...++||.|+.|.++... .+...+++++.++|||||+|.+.+..... .......+.....
T Consensus 115 ~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (236)
T 1zx0_A 115 GLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQV 194 (236)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTH
T ss_pred cCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHH
Confidence 9988873 333689999997775332 23447799999999999999976533211 1111112223333
Q ss_pred HHHHhcCCe---EEEEEeeCCCCCCccccccccccccccCccccccee
Q 020270 278 LELENLGFS---MQLIPLPVKNCLGEEVWEGVKHKYWQLDTYYLPVCQ 322 (328)
Q Consensus 278 ~~l~~~G~~---~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 322 (328)
..|.++||+ ++++.+++... -..+||..+.+..|+|+
T Consensus 195 ~~l~~aGF~~~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 234 (236)
T 1zx0_A 195 PALLEAGFRRENIRTEVMALVPP--------ADCRYYAFPQMITPLVT 234 (236)
T ss_dssp HHHHHTTCCGGGEEEEEEECCCC--------TTCSSCCCSEEEEEEEE
T ss_pred HHHHHCCCCCCceeEEEEeccCC--------ccceeecchhhcccccc
Confidence 478999998 67776666321 14689999999999986
No 117
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=99.30 E-value=2.5e-12 Score=111.96 Aligned_cols=121 Identities=21% Similarity=0.339 Sum_probs=86.1
Q ss_pred CCceeeecccCCcch--h---HH--hccCCceEEeeccC------------HHHHHHHHHcC-C--CCCCCeeEEecccc
Q 020270 157 GGHILNIGFGMGLVD--T---AI--QQYSPVTHTILEAH------------PEVYERMLRTG-W--GEKNNVKIIFGRWQ 214 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~--~---~~--~~~~~~~~~a~e~~------------~~~~~~L~~~g-~--~~~~~~~~~~g~w~ 214 (328)
...|+|+|||+|+.. . .. .....++++..|.+ .++.+.+...- + .....+.+..|+..
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 357999999999821 1 11 12334666666653 24444444321 1 11234566778877
Q ss_pred hhccCCC--CCCEEEEecC-----ccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeE
Q 020270 215 DNLSQLE--SYDGIFFDTY-----GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSM 287 (328)
Q Consensus 215 ~~~~~~~--~fD~i~~d~f-----~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~ 287 (328)
+.+..+. .+|+||+|+| |++|+. ++|+.++++++|||+|++|++.|.+|+. |+++||.|
T Consensus 177 ~~l~~l~~~~~Da~flDgFsP~kNPeLWs~--e~f~~l~~~~~pgg~laTYtaag~VRR~------------L~~aGF~V 242 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAFSPYKNPELWTL--DFLSLIKERIDEKGYWVSYSSSLSVRKS------------LLTLGFKV 242 (308)
T ss_dssp HHGGGCCSCCEEEEEECCSCTTTSGGGGSH--HHHHHHHTTEEEEEEEEESCCCHHHHHH------------HHHTTCEE
T ss_pred HHHhhhcccceeEEEeCCCCcccCcccCCH--HHHHHHHHHhCCCcEEEEEeCcHHHHHH------------HHHCCCEE
Confidence 7776663 5899999999 799999 9999999999999999988887766655 99999998
Q ss_pred EEEE
Q 020270 288 QLIP 291 (328)
Q Consensus 288 ~~~~ 291 (328)
+-.+
T Consensus 243 ~k~~ 246 (308)
T 3vyw_A 243 GSSR 246 (308)
T ss_dssp EEEE
T ss_pred EecC
Confidence 7554
No 118
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.13 E-value=3.3e-11 Score=103.66 Aligned_cols=118 Identities=25% Similarity=0.462 Sum_probs=85.3
Q ss_pred CCceeeecccCCcchhH-Hhcc------C------CceEEeeccCH---HH--------------HHHHHHcCCC-----
Q 020270 157 GGHILNIGFGMGLVDTA-IQQY------S------PVTHTILEAHP---EV--------------YERMLRTGWG----- 201 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~-~~~~------~------~~~~~a~e~~~---~~--------------~~~L~~~g~~----- 201 (328)
...|||+|||+|..... .+.. . .++++++|.+| +. .+.+++. |.
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~-w~~~~~g 139 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQ-WPMPLPG 139 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHT-CCCSCSE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHh-ccccccc
Confidence 46799999999993321 1110 2 36888899887 33 3333332 21
Q ss_pred --------CCCCeeEEecccchhccCCC-----CCCEEEEecC-----ccchhhHHHHHHHHhhccCCCcEEEEeccccC
Q 020270 202 --------EKNNVKIIFGRWQDNLSQLE-----SYDGIFFDTY-----GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 202 --------~~~~~~~~~g~w~~~~~~~~-----~fD~i~~d~f-----~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
...++++..|+..+.++.+. .||.||.|+| |++|+. ++|+.+.++|+|||+|++|++.+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~--~~l~~l~~~L~pGG~l~tysaa~- 216 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQ--NLFNAMARLARPGGTLATFTSAG- 216 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCH--HHHHHHHHHEEEEEEEEESCCBH-
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCH--HHHHHHHHHcCCCcEEEEEeCCH-
Confidence 12467788898888766652 6999999998 467887 99999999999999999888643
Q ss_pred CcchhHHhhhHHHHHHHHhcCCeEEE
Q 020270 264 GNAFFHVVYCHLVSLELENLGFSMQL 289 (328)
Q Consensus 264 ~~~~~~~~y~~~~~~~l~~~G~~~~~ 289 (328)
.+++.|+++||.|+-
T Consensus 217 -----------~vrr~L~~aGF~v~~ 231 (257)
T 2qy6_A 217 -----------FVRRGLQEAGFTMQK 231 (257)
T ss_dssp -----------HHHHHHHHHTEEEEE
T ss_pred -----------HHHHHHHHCCCEEEe
Confidence 466779999999773
No 119
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.54 E-value=7.7e-07 Score=76.45 Aligned_cols=136 Identities=15% Similarity=0.080 Sum_probs=97.3
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
..+.+||++|+|.|...............+++..+.+++...+..... .++.+..+++.+......+||.|+....-++
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEEEEeHHHHHHh
Confidence 345689999999998443333322457888999999999998876444 6788888887776544578999999877788
Q ss_pred h--hhHHHHHHHHhhccCCCcEEEEeccccCC----cchhH--------Hhhh-HHHHHHHHhcCCe-EEEEE
Q 020270 235 Y--EDLREFHQHLPKLLKPGGIYSYFNGLCGG----NAFFH--------VVYC-HLVSLELENLGFS-MQLIP 291 (328)
Q Consensus 235 ~--~~l~~~~~~~~~lL~~gG~~~~~~~~g~~----~~~~~--------~~y~-~~~~~~l~~~G~~-~~~~~ 291 (328)
+ .+...+++++.++|+|||++.+....... ...+. ..+. ...+..|+++||+ ++.++
T Consensus 133 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 133 LSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 8 88899999999999999999976432222 11111 1112 2566689999998 44444
No 120
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.53 E-value=3.1e-06 Score=70.52 Aligned_cols=133 Identities=18% Similarity=0.172 Sum_probs=93.5
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|.|......... .....+++..+.+++...+... .++.+..++..+.... .+||.|+....-++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVP-TSIDTIVSTYAFHH 118 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCC-SCCSEEEEESCGGG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCC-CCeEEEEECcchhc
Confidence 35678999999999854433333 3478889999999998887642 4677778887766555 78999999877677
Q ss_pred hhhHHH--HHHHHhhccCCCcEEEEeccccCCcchh----------------HHh---h---hHHHHHHHHhcCCeEEEE
Q 020270 235 YEDLRE--FHQHLPKLLKPGGIYSYFNGLCGGNAFF----------------HVV---Y---CHLVSLELENLGFSMQLI 290 (328)
Q Consensus 235 ~~~l~~--~~~~~~~lL~~gG~~~~~~~~g~~~~~~----------------~~~---y---~~~~~~~l~~~G~~~~~~ 290 (328)
+.+... +++++.++|+|||++.+....-...... .+. + ....+..|+++||+++..
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 766544 9999999999999999764222211100 000 0 125566899999997766
Q ss_pred Ee
Q 020270 291 PL 292 (328)
Q Consensus 291 ~~ 292 (328)
..
T Consensus 199 ~~ 200 (220)
T 3hnr_A 199 RL 200 (220)
T ss_dssp EC
T ss_pred ec
Confidence 53
No 121
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.53 E-value=6e-08 Score=95.08 Aligned_cols=118 Identities=24% Similarity=0.396 Sum_probs=83.6
Q ss_pred CceeeecccCCcch----hHHh---------ccCCceEEeeccCH---HHHHHHHHc-------------CCCCC-----
Q 020270 158 GHILNIGFGMGLVD----TAIQ---------QYSPVTHTILEAHP---EVYERMLRT-------------GWGEK----- 203 (328)
Q Consensus 158 ~~iLe~g~~~g~~~----~~~~---------~~~~~~~~a~e~~~---~~~~~L~~~-------------g~~~~----- 203 (328)
..|+|.|||+|+.- .... ....+++++.|.+| +.++..++. .|...
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 57999999999921 1111 23457888899844 444422221 13321
Q ss_pred --------CCeeEEecccchhccCC-----CCCCEEEEecC-----ccchhhHHHHHHHHhhccCCCcEEEEeccccCCc
Q 020270 204 --------NNVKIIFGRWQDNLSQL-----ESYDGIFFDTY-----GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN 265 (328)
Q Consensus 204 --------~~~~~~~g~w~~~~~~~-----~~fD~i~~d~f-----~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~ 265 (328)
..+++..|+..+.+..+ ..||.+|+|.| |++|+. ++|..+++++++||.+++|++.+.+
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~--~~~~~l~~~~~~g~~~~t~~~~~~v- 224 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQ--NLFNAMARLARPGGTLATFTSAGFV- 224 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCH--HHHHHHHHHEEEEEEEEESCCCHHH-
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhH--HHHHHHHHHhCCCCEEEeccCcHHH-
Confidence 33445566666655554 46999999999 799998 9999999999999999988876644
Q ss_pred chhHHhhhHHHHHHHHhcCCeEEE
Q 020270 266 AFFHVVYCHLVSLELENLGFSMQL 289 (328)
Q Consensus 266 ~~~~~~y~~~~~~~l~~~G~~~~~ 289 (328)
++.|+++||.++-
T Consensus 225 -----------r~~L~~aGf~v~~ 237 (676)
T 3ps9_A 225 -----------RRGLQDAGFTMQK 237 (676)
T ss_dssp -----------HHHHHHHTCEEEE
T ss_pred -----------HHHHHhCCeEEEe
Confidence 5559999999774
No 122
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.51 E-value=2.7e-06 Score=70.93 Aligned_cols=140 Identities=13% Similarity=0.139 Sum_probs=95.1
Q ss_pred cCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCCCCC------CCeeEEecccchhccCCCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGWGEK------NNVKIIFGRWQDNLSQLESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~~~~------~~~~~~~g~w~~~~~~~~~fD~i~ 227 (328)
....+||++|+|.|..........+ ....+++..+.+++...+.-.... .++.+..+++........+||.|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4567899999999995544444333 678899999999998876421111 268888887755444446899999
Q ss_pred EecCccchh--hHHHHHHHHhhccCCCcEEEEeccccC---------------Ccchh--HHhhhHHHHHHHHhcCCeEE
Q 020270 228 FDTYGEYYE--DLREFHQHLPKLLKPGGIYSYFNGLCG---------------GNAFF--HVVYCHLVSLELENLGFSMQ 288 (328)
Q Consensus 228 ~d~f~e~~~--~l~~~~~~~~~lL~~gG~~~~~~~~g~---------------~~~~~--~~~y~~~~~~~l~~~G~~~~ 288 (328)
....-+++. ++..+++++.++|+|||++.+.....- ....+ -+.+....+..++++||+|+
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~ 187 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVR 187 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEE
Confidence 877767666 447999999999999998776422110 01110 01122234467889999999
Q ss_pred EEEeeC
Q 020270 289 LIPLPV 294 (328)
Q Consensus 289 ~~~~~~ 294 (328)
+..+..
T Consensus 188 ~~~~g~ 193 (219)
T 3jwg_A 188 FLQIGE 193 (219)
T ss_dssp EEEESC
T ss_pred EEecCC
Confidence 988666
No 123
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.51 E-value=4.6e-07 Score=78.03 Aligned_cols=147 Identities=14% Similarity=0.162 Sum_probs=100.7
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|+|........ ......+++..+.+++...+ ..++.+..+++.+.....++||.|+.....++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~-----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 106 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVV-----HPQVEWFTGYAENLALPDKSVDGVISILAIHH 106 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCC-----CTTEEEECCCTTSCCSCTTCBSEEEEESCGGG
T ss_pred CCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHh-----ccCCEEEECchhhCCCCCCCEeEEEEcchHhh
Confidence 4567899999999995544333 33577888888887764433 23788888887765544568999999887788
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEeccccCCcc------hhH-------Hhhh--HHHHHHHHhcCCe-EEEEEeeCCCCC
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYFNGLCGGNA------FFH-------VVYC--HLVSLELENLGFS-MQLIPLPVKNCL 298 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~------~~~-------~~y~--~~~~~~l~~~G~~-~~~~~~~~~~~~ 298 (328)
+.+...+++++.++|+ ||++.+...-..... .+. ..|. ...+ .|+++||. ++.+.++++
T Consensus 107 ~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~~~p--- 181 (261)
T 3ege_A 107 FSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPFLLP--- 181 (261)
T ss_dssp CSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEECCEE---
T ss_pred ccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEecCC---
Confidence 8899999999999999 997766533211110 000 0111 1344 89999996 666666552
Q ss_pred Ccccccccccccccc
Q 020270 299 GEEVWEGVKHKYWQL 313 (328)
Q Consensus 299 ~~~~w~~~~~~~~~~ 313 (328)
-..|.+....||..
T Consensus 182 -~~~~~~~~~~~~~~ 195 (261)
T 3ege_A 182 -HDLSDLFAAAAWRR 195 (261)
T ss_dssp -TTCSBCCTTTTTTC
T ss_pred -CcCcchhhHHhccC
Confidence 25677777788873
No 124
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.47 E-value=1.6e-06 Score=74.11 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=80.8
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
...+||++|+|.|..........+....+++..+++++...+... ..++.+..++..+......+||.|+....-+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 467899999999985444333334378889999999999888653 567888888877665445789999998877777
Q ss_pred hhHHHHHHHHhhccCCCcEEEEe
Q 020270 236 EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 236 ~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
.++..+++++.++|+|||++.+.
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 122 ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCCcEEEEE
Confidence 88899999999999999999974
No 125
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.43 E-value=3.9e-06 Score=70.99 Aligned_cols=138 Identities=13% Similarity=0.078 Sum_probs=97.3
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
.....+||++|+|.|......... .....+++..+.+++...+.. ...++.+..++..+......+||.|+....-+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 346679999999999854433333 346788999999999998864 34678888888776654456899999988778
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccccC--CcchhHH-h---------hh-HHHHHHHHhcCCeEE-EEEeeC
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGLCG--GNAFFHV-V---------YC-HLVSLELENLGFSMQ-LIPLPV 294 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~--~~~~~~~-~---------y~-~~~~~~l~~~G~~~~-~~~~~~ 294 (328)
+..+...+++++.++|+|||++.+...... .....+. . +. ...+..|+++||++. .+.+-.
T Consensus 128 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 202 (242)
T 3l8d_A 128 WTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYK 202 (242)
T ss_dssp SSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred hccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecccc
Confidence 888888999999999999999987542111 1111111 1 22 256678999999944 343433
No 126
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.43 E-value=1.2e-06 Score=74.29 Aligned_cols=134 Identities=16% Similarity=0.172 Sum_probs=92.6
Q ss_pred hhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 153 ICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 153 ~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
......+||++|+|.|..........+ ...+++..+.+++...+.-.. ...++.+..+++........+||.|+....
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc
Confidence 345678899999999985443333333 778888999888877653110 013577888887765444468999999877
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchh---HH------------hhh-HHHHHHHHhcCCeE
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFF---HV------------VYC-HLVSLELENLGFSM 287 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~---~~------------~y~-~~~~~~l~~~G~~~ 287 (328)
..++.+...++.++.++|+|||++.+........... +. .|. ......|+++||.+
T Consensus 97 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 168 (239)
T 1xxl_A 97 AHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAY 168 (239)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEE
T ss_pred hhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcE
Confidence 7888888999999999999999999865444332111 00 111 14455789999983
No 127
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.42 E-value=2.8e-06 Score=70.14 Aligned_cols=130 Identities=18% Similarity=0.142 Sum_probs=92.8
Q ss_pred cCCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+..||++|+|.|........ ......++++.++++++.+.++.... -.++.+..+++.+.......||.|+.+...
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSG 118 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCC
Confidence 4567899999999984433332 33457888999999998887642110 146888888877666666789999997754
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCC
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVK 295 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~ 295 (328)
. ++..+++++.++|+|||++.+...... ........|++.||.++...+.+.
T Consensus 119 ~---~~~~~l~~~~~~LkpgG~l~~~~~~~~--------~~~~~~~~l~~~g~~~~~~~~~~~ 170 (204)
T 3e05_A 119 G---MLEEIIDAVDRRLKSEGVIVLNAVTLD--------TLTKAVEFLEDHGYMVEVACVNVA 170 (204)
T ss_dssp T---CHHHHHHHHHHHCCTTCEEEEEECBHH--------HHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred c---CHHHHHHHHHHhcCCCeEEEEEecccc--------cHHHHHHHHHHCCCceeEEEEEee
Confidence 3 456999999999999999997532111 122445578999998888888773
No 128
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.42 E-value=1.2e-06 Score=75.47 Aligned_cols=132 Identities=19% Similarity=0.103 Sum_probs=91.9
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+.+||++|+|.|..............++++..+.+++.+.+... ....++++..+++.+......+||.|+....-
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 3467899999999995544444444578889999998888766421 12356888888887765445689999987766
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccC---CcchhH----Hhh----h-HHHHHHHHhcCCeE
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCG---GNAFFH----VVY----C-HLVSLELENLGFSM 287 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~---~~~~~~----~~y----~-~~~~~~l~~~G~~~ 287 (328)
++. +...+++++.++|+|||++.+...... ...... ..| . ......|+++||.+
T Consensus 125 ~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (267)
T 3kkz_A 125 YNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLP 190 (267)
T ss_dssp GGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEE
T ss_pred eec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEE
Confidence 666 678999999999999999997643211 111111 111 1 14556899999994
No 129
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.42 E-value=2.2e-07 Score=79.57 Aligned_cols=132 Identities=17% Similarity=0.125 Sum_probs=90.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+.+||++|+|.|..............++++..+++++...+... ....++.+..+++.+... ..+||.|+.....
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~ 113 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGAT 113 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCCh
Confidence 4567899999999985443333224467888999999888765421 122468888888877655 5679999986666
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccCCc---chh---------HHhhh-HHHHHHHHhcCCeE
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN---AFF---------HVVYC-HLVSLELENLGFSM 287 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~---~~~---------~~~y~-~~~~~~l~~~G~~~ 287 (328)
.++.+...+++++.++|+|||++.+........ ..+ ...+. ......|+++||++
T Consensus 114 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 181 (256)
T 1nkv_A 114 WIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDV 181 (256)
T ss_dssp GGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCC
T ss_pred HhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCee
Confidence 677777899999999999999999854322111 000 01112 24556789999994
No 130
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.41 E-value=4.2e-06 Score=70.28 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=76.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCC------CeeEEecccchhccCCCCCCEEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKN------NVKIIFGRWQDNLSQLESYDGIFF 228 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~------~~~~~~g~w~~~~~~~~~fD~i~~ 228 (328)
....+||++|+|.|......... .....+++..+.+++...+....... ++.+..+..........+||.|+.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 45678999999999854433333 34788899999999988875433222 467777776665544567999999
Q ss_pred ecCccchhhHH---HHHHHHhhccCCCcEEEEe
Q 020270 229 DTYGEYYEDLR---EFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 229 d~f~e~~~~l~---~~~~~~~~lL~~gG~~~~~ 258 (328)
...-+++.+.. .+++++.++|+|||++.+.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 87766665544 8999999999999999875
No 131
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.41 E-value=2.7e-06 Score=72.94 Aligned_cols=138 Identities=16% Similarity=0.173 Sum_probs=93.1
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|.|..........+ ..++++..+++++...+..... ..++.+..++.........+||.|+.....+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 4567899999999985444433333 7888889999988876532111 1357788887766544446899999987778
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccccCCcch---hHH------------hhh-HHHHHHHHhcCCe-EEEEEee
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAF---FHV------------VYC-HLVSLELENLGFS-MQLIPLP 293 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~---~~~------------~y~-~~~~~~l~~~G~~-~~~~~~~ 293 (328)
++.+...++.++.++|+|||++.+.....+.... +.. .|. ......|+++||. ++++...
T Consensus 115 ~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 115 HFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCFH 191 (260)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEee
Confidence 8888899999999999999999986433322211 000 111 1445578999998 3444443
No 132
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.41 E-value=3.9e-06 Score=69.91 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=94.0
Q ss_pred cCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCCCCC------CCeeEEecccchhccCCCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGWGEK------NNVKIIFGRWQDNLSQLESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~~~~------~~~~~~~g~w~~~~~~~~~fD~i~ 227 (328)
....+||++|+|.|..........+ ...++++..+.+++...+.-.... .++.+..++.........+||.|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 4567899999999995544443333 578899999999998876421111 268888887654443346899999
Q ss_pred EecCccchh--hHHHHHHHHhhccCCCcEEEEecccc---------------CCcchh--HHhhhHHHHHHHHhcCCeEE
Q 020270 228 FDTYGEYYE--DLREFHQHLPKLLKPGGIYSYFNGLC---------------GGNAFF--HVVYCHLVSLELENLGFSMQ 288 (328)
Q Consensus 228 ~d~f~e~~~--~l~~~~~~~~~lL~~gG~~~~~~~~g---------------~~~~~~--~~~y~~~~~~~l~~~G~~~~ 288 (328)
....-+++. ++..+++++.++|+|||++.+..... .....+ -+.+....+..+++.||+|+
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQ 187 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEE
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEE
Confidence 877767665 45799999999999999887642211 001110 01112234478889999999
Q ss_pred EEEeeC
Q 020270 289 LIPLPV 294 (328)
Q Consensus 289 ~~~~~~ 294 (328)
+..+..
T Consensus 188 ~~~~g~ 193 (217)
T 3jwh_A 188 FQPIGE 193 (217)
T ss_dssp ECCCSC
T ss_pred EEecCC
Confidence 887655
No 133
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.41 E-value=2.4e-06 Score=74.43 Aligned_cols=103 Identities=21% Similarity=0.263 Sum_probs=79.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhc-cCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNL-SQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~-~~~~~fD~i~~d~f 231 (328)
....+||++|+|.|......... .....+++..+++++...+.-.. ...++.+..+++.+.. ....+||.|+....
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 34568999999999854433333 45788899999999888764211 2256788888887765 33468999999888
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEe
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
-+++.+...+++++.++|+|||++.+.
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEE
Confidence 788888889999999999999999874
No 134
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.41 E-value=4.7e-06 Score=69.56 Aligned_cols=143 Identities=17% Similarity=0.115 Sum_probs=96.5
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccchh
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYYE 236 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~~ 236 (328)
..+||++|+|.|......... .+++..+.+++...+. ++....++..+......+||.|+....-++..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhcc
Confidence 689999999999855433332 8888999999998886 46677777655443345799999987767777
Q ss_pred hHHHHHHHHhhccCCCcEEEEeccccCCc-chhH-------------Hhhh-HHHHHHHHhcCCe-EEEEEeeCCCCCCc
Q 020270 237 DLREFHQHLPKLLKPGGIYSYFNGLCGGN-AFFH-------------VVYC-HLVSLELENLGFS-MQLIPLPVKNCLGE 300 (328)
Q Consensus 237 ~l~~~~~~~~~lL~~gG~~~~~~~~g~~~-~~~~-------------~~y~-~~~~~~l~~~G~~-~~~~~~~~~~~~~~ 300 (328)
+...+++++.++|+|||++.+........ ...+ ..|. ...+..|+++||+ ++..+.....+..+
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~p~~~ 196 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTLFKHPSEL 196 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEECCSCGGGC
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecccCCCCCcc
Confidence 78899999999999999998753211100 0000 0122 2566689999999 45555444333345
Q ss_pred cccccccccc
Q 020270 301 EVWEGVKHKY 310 (328)
Q Consensus 301 ~~w~~~~~~~ 310 (328)
..|.-.++++
T Consensus 197 ~~~~~~~~~~ 206 (219)
T 1vlm_A 197 SEIEPVKEGY 206 (219)
T ss_dssp SSCCCCEESS
T ss_pred ccchhhhcCC
Confidence 5676665544
No 135
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.40 E-value=2.6e-06 Score=70.08 Aligned_cols=130 Identities=17% Similarity=0.080 Sum_probs=93.3
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccchh
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYYE 236 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~~ 236 (328)
..+||++|+|.|......... .....+++..+++++...+.. .++.+..+++.+......+||.|+....-+++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTH----PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHC----TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC----CCCeEEeCcccccccCCCCeEEEEehhhHhcCC
Confidence 688999999999854433333 337888999999999988863 367888888877655557899999977666664
Q ss_pred --hHHHHHHHHhhccCCCcEEEEeccccCCcchhH------Hhh-hHHHHHHHHhcCCeEEEEE
Q 020270 237 --DLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFH------VVY-CHLVSLELENLGFSMQLIP 291 (328)
Q Consensus 237 --~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~------~~y-~~~~~~~l~~~G~~~~~~~ 291 (328)
+...+++++.++|+|||++.+..........+. ..+ ....+..|+++||++.-..
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 788999999999999999987543332211000 012 2366778999999955444
No 136
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.39 E-value=2.1e-06 Score=78.26 Aligned_cols=137 Identities=14% Similarity=0.168 Sum_probs=95.6
Q ss_pred CCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc---------CCCCCCCeeEEecccchh------cc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT---------GWGEKNNVKIIFGRWQDN------LS 218 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~---------g~~~~~~~~~~~g~w~~~------~~ 218 (328)
.+.+||++|+|+|........ ......++++..+.+++...++ |+....++.+..+++.+. ..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 457899999999984432222 1345788899999999988875 534446788888887765 33
Q ss_pred CCCCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccCCc--------chhHH------hhhHHHHHHHHhcC
Q 020270 219 QLESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN--------AFFHV------VYCHLVSLELENLG 284 (328)
Q Consensus 219 ~~~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~--------~~~~~------~y~~~~~~~l~~~G 284 (328)
...+||.|+....-.++.+...+++++.++|||||++.+........ ...+. .+.......|+++|
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 242 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAG 242 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTT
T ss_pred CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCC
Confidence 33689999998877777888899999999999999999754332211 00000 11235666899999
Q ss_pred Ce-EEEEEe
Q 020270 285 FS-MQLIPL 292 (328)
Q Consensus 285 ~~-~~~~~~ 292 (328)
|. ++..+.
T Consensus 243 F~~v~~~~~ 251 (383)
T 4fsd_A 243 FRDVRLVSV 251 (383)
T ss_dssp CCCEEEEEE
T ss_pred CceEEEEec
Confidence 97 544443
No 137
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.39 E-value=1.4e-06 Score=74.27 Aligned_cols=133 Identities=20% Similarity=0.243 Sum_probs=91.6
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
...+||++|+|.|...............+++..+.+++.+.+..... .++.+..+++.+......+||.|+....-+++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 46789999999998443222222446788899999999988764332 56788888877655444689999987766666
Q ss_pred --hhHHHHHHHHhhccCCCcEEEEeccccCCcchhHH------hhh-HHHHHHHHhcCCeEEE
Q 020270 236 --EDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHV------VYC-HLVSLELENLGFSMQL 289 (328)
Q Consensus 236 --~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~------~y~-~~~~~~l~~~G~~~~~ 289 (328)
.++..+++++.++|+|||++.+............+ .+. ...+..|+++||++.-
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 234 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVK 234 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEE
Confidence 56889999999999999999986432211111000 112 3566689999999543
No 138
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.39 E-value=1e-06 Score=73.25 Aligned_cols=105 Identities=20% Similarity=0.233 Sum_probs=79.5
Q ss_pred CceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 158 GHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 158 ~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
.+||++|+|.|...............+++..+.+++...+.- .....++.+..++..+......+||.|+....-+++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc
Confidence 389999999998544333333457788889998888876651 112346888888877655444689999998877788
Q ss_pred hhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 236 EDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 236 ~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.+...+++++.++|+|||++.+....+
T Consensus 125 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 125 EDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred cCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 888899999999999999999865444
No 139
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.38 E-value=3.6e-07 Score=89.75 Aligned_cols=120 Identities=19% Similarity=0.366 Sum_probs=85.5
Q ss_pred CCceeeecccCCcch----hHHh---------ccCCceEEeeccCH---HHHHHHHH-------------cCCCC-----
Q 020270 157 GGHILNIGFGMGLVD----TAIQ---------QYSPVTHTILEAHP---EVYERMLR-------------TGWGE----- 202 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~----~~~~---------~~~~~~~~a~e~~~---~~~~~L~~-------------~g~~~----- 202 (328)
...|+|.|||+|+.- .... ....+++++.|.+| +.++..+. ..|..
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 457999999999921 1111 12347888889855 33333221 12322
Q ss_pred --------CCCeeEEecccchhccCC-----CCCCEEEEecC-----ccchhhHHHHHHHHhhccCCCcEEEEeccccCC
Q 020270 203 --------KNNVKIIFGRWQDNLSQL-----ESYDGIFFDTY-----GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGG 264 (328)
Q Consensus 203 --------~~~~~~~~g~w~~~~~~~-----~~fD~i~~d~f-----~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~ 264 (328)
...++++.|+..+.+..+ ..+|.+|.|.| |++|+. +||..+.+++++||.+++|+..+.+
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~--~~~~~l~~~~~~g~~~~t~~~~~~v 216 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNE--QLFNAMARMTRPGGTFSTFTAAGFV 216 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSH--HHHHHHHHHEEEEEEEEESCCCHHH
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhH--HHHHHHHHHhCCCCEEEeccCcHHH
Confidence 235666778877777655 46999999999 799998 9999999999999999988776544
Q ss_pred cchhHHhhhHHHHHHHHhcCCeEEEE
Q 020270 265 NAFFHVVYCHLVSLELENLGFSMQLI 290 (328)
Q Consensus 265 ~~~~~~~y~~~~~~~l~~~G~~~~~~ 290 (328)
++.|.++||.++-.
T Consensus 217 ------------r~~l~~aGf~~~~~ 230 (689)
T 3pvc_A 217 ------------RRGLQQAGFNVTKV 230 (689)
T ss_dssp ------------HHHHHHTTCEEEEE
T ss_pred ------------HHHHHhCCeEEEec
Confidence 55599999997754
No 140
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.37 E-value=4.7e-06 Score=70.56 Aligned_cols=99 Identities=20% Similarity=0.215 Sum_probs=78.3
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
...+||++|+|.|..........+ ...+++..+.+++...+.... ++.+..++..+.. ...+||.|+....-++.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDAQ-LPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGCC-CSSCEEEEEEESCGGGC
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHcC-cCCcccEEEEhhHHHhh
Confidence 457899999999985544443333 678899999999998876422 6888888877663 34679999998887888
Q ss_pred hhHHHHHHHHh-hccCCCcEEEEec
Q 020270 236 EDLREFHQHLP-KLLKPGGIYSYFN 259 (328)
Q Consensus 236 ~~l~~~~~~~~-~lL~~gG~~~~~~ 259 (328)
.+...+++++. ++|+|||++.+..
T Consensus 117 ~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 117 DDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp SSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 88889999999 9999999998753
No 141
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.36 E-value=2.2e-06 Score=73.34 Aligned_cols=133 Identities=19% Similarity=0.155 Sum_probs=90.9
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
.+.+||++|+|.|..........+....+++.++.+++.+.+... .....+.+..+++.+......+||.|+....-.
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 456899999999995544444444578889999998888765421 123348888888866654456899999987666
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccc--cCC-cchhHHhh--------h-HHHHHHHHhcCCeEEE
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGL--CGG-NAFFHVVY--------C-HLVSLELENLGFSMQL 289 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~--g~~-~~~~~~~y--------~-~~~~~~l~~~G~~~~~ 289 (328)
+. +...+++++.++|+|||++.+.... ... .....+.+ . ......|+++||++..
T Consensus 126 ~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 126 NI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp CC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred hc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 65 6789999999999999999986422 111 11111111 1 2445588999999443
No 142
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.34 E-value=5.6e-06 Score=71.99 Aligned_cols=142 Identities=15% Similarity=0.118 Sum_probs=88.5
Q ss_pred hcCCCceeeecccCCc-chhHHhccCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCCCCCCEEEE
Q 020270 154 CSGGGHILNIGFGMGL-VDTAIQQYSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQLESYDGIFF 228 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~-~~~~~~~~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~ 228 (328)
...+.+||++|+|+|- .............++++.++++++...+. |. .++++..++..+.. ..+||.|+.
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l~--d~~FDvV~~ 194 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVID--GLEFDVLMV 194 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGGG--GCCCSEEEE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhCC--CCCcCEEEE
Confidence 3567899999999874 22222222345788899999999887764 42 57888888876653 367999998
Q ss_pred ecCccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCCCCC----------
Q 020270 229 DTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVKNCL---------- 298 (328)
Q Consensus 229 d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~~~~---------- 298 (328)
+... .+...+++++.+.|||||++.+..+-+ .+..+|..... . ...||.+-....+..+..
T Consensus 195 ~a~~---~d~~~~l~el~r~LkPGG~Lvv~~~~~-~r~~l~~~v~~---~--~~~gf~~~~~~~p~~~v~N~vv~a~k~~ 265 (298)
T 3fpf_A 195 AALA---EPKRRVFRNIHRYVDTETRIIYRTYTG-MRAILYAPVSD---D--DITGFRRAGVVLPSGKVNNTSVLVFKCP 265 (298)
T ss_dssp CTTC---SCHHHHHHHHHHHCCTTCEEEEEECCG-GGGGSSCCCCT---G--GGTTEEEEEEECCCTTCCCEEEEEEECC
T ss_pred CCCc---cCHHHHHHHHHHHcCCCcEEEEEcCcc-hhhhccccCCh---h--hhhhhhheeEECCCCCcCcEEEEEEccC
Confidence 7763 445599999999999999999876543 34443333332 1 223888666665553211
Q ss_pred ----Ccccccccccc
Q 020270 299 ----GEEVWEGVKHK 309 (328)
Q Consensus 299 ----~~~~w~~~~~~ 309 (328)
-+..|||++|-
T Consensus 266 ~~~~~~~~~~~~~~~ 280 (298)
T 3fpf_A 266 DKGELNSKLEGKPIP 280 (298)
T ss_dssp ---------------
T ss_pred CchHHHHHHhcccCC
Confidence 24678888874
No 143
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.34 E-value=1.8e-06 Score=73.23 Aligned_cols=135 Identities=18% Similarity=0.168 Sum_probs=91.0
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
...+||++|+|.|...............+++..+.+++.+.+..... ..++.+..+.+.+......+||.|+......+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 36789999999998554333333457888999999999888754222 23467777777666554457999999876666
Q ss_pred hhh--HHHHHHHHhhccCCCcEEEEeccccCCcchhH---H--h-hhHHHHHHHHhcCCeEEEE
Q 020270 235 YED--LREFHQHLPKLLKPGGIYSYFNGLCGGNAFFH---V--V-YCHLVSLELENLGFSMQLI 290 (328)
Q Consensus 235 ~~~--l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~---~--~-y~~~~~~~l~~~G~~~~~~ 290 (328)
+.+ +..+++++.++|+|||++.+..........+. . . -....+..|+++||++...
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 654 56899999999999999997432222110000 0 0 1235566889999995443
No 144
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.34 E-value=1.3e-06 Score=72.74 Aligned_cols=138 Identities=16% Similarity=0.125 Sum_probs=94.3
Q ss_pred hcCCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEec
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
.....+||++|+|.|......... ......+++..+++++...+.-... ..++.+..++..+......+||.|+...
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh
Confidence 345678999999999844333222 3357888999998888776642111 1268888888766554446799999988
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCC---cchhHHhhh-HHHHHHHHhcCCe-EEEEE
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGG---NAFFHVVYC-HLVSLELENLGFS-MQLIP 291 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~---~~~~~~~y~-~~~~~~l~~~G~~-~~~~~ 291 (328)
.-+++.+...+++++.++|+|||++.+....... .......|. ...+..|+++||+ ++..+
T Consensus 115 ~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 180 (219)
T 3dh0_A 115 TFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVE 180 (219)
T ss_dssp CGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEe
Confidence 8778888889999999999999999975322211 111111222 3667789999999 44433
No 145
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.30 E-value=5.8e-06 Score=68.64 Aligned_cols=100 Identities=20% Similarity=0.352 Sum_probs=76.5
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|.|......... .....+++..+.+++...+.+. .++.+..++..+. ....+||.|+....-++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~---~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGL---DNVEFRQQDLFDW-TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCC---TTEEEEECCTTSC-CCSSCEEEEEEESCGGG
T ss_pred CCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCC---CCeEEEecccccC-CCCCceeEEEEechhhc
Confidence 44568999999999854433332 3477889999999999988442 4688888887766 44468999999876666
Q ss_pred hhh--HHHHHHHHhhccCCCcEEEEec
Q 020270 235 YED--LREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 235 ~~~--l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
+.+ +..+++++.++|+|||++.+..
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 655 4799999999999999998763
No 146
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.29 E-value=4.1e-06 Score=72.46 Aligned_cols=105 Identities=24% Similarity=0.295 Sum_probs=78.9
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+.+||++|+|.|.......... .....+++..+.+++...+.-.. ...++.+..++..+......+||.|+....-
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 456789999999998544333332 35788899999888877664211 1135888888877665555789999998877
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEec
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
.++.+...+++++.++|+|||++.+..
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 777888899999999999999999853
No 147
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.29 E-value=9.7e-06 Score=69.39 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=78.9
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|+|......... .....+++..+.+++...+.-.....++.+..+++.+......+||.|+....-.+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 45678999999999854433332 35688899999999988876422345788888887765544467999998776666
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEe
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
..+...+++++.++|+|||++.+.
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHCCCCcEEEEE
Confidence 677889999999999999999876
No 148
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.29 E-value=5.7e-06 Score=72.88 Aligned_cols=137 Identities=20% Similarity=0.169 Sum_probs=92.6
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcC-----CCCCCCeeEEecccchhccC--CCCCCEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTG-----WGEKNNVKIIFGRWQDNLSQ--LESYDGI 226 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g-----~~~~~~~~~~~g~w~~~~~~--~~~fD~i 226 (328)
....+||++|+|.|.......... .....+++-.+.+++...+.- .....++++..++....+.. ..+||.|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 456789999999998555444432 357888999999999887642 11346788888887766543 4679999
Q ss_pred EEecCccchhh--H--HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe-EEEEEeeCC
Q 020270 227 FFDTYGEYYED--L--REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS-MQLIPLPVK 295 (328)
Q Consensus 227 ~~d~f~e~~~~--l--~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~-~~~~~~~~~ 295 (328)
+.|.+...+.. + .+|++.+.++|+|||++.+..+..-.. .-....+...|+++||. |+...+.++
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~GF~~v~~~~~~vP 243 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD----LELIEKMSRFIRETGFASVQYALMHVP 243 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHHHTCSEEEEEECCCT
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc----hHHHHHHHHHHHhCCCCcEEEEEeecc
Confidence 99987322211 1 489999999999999999764321111 01123455578999997 777776664
No 149
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.28 E-value=4.2e-06 Score=72.93 Aligned_cols=104 Identities=14% Similarity=0.133 Sum_probs=79.5
Q ss_pred cCCCceeeecccCCcchhHHhccCC--ceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP--VTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~--~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
....+||++|+|+|..........| ....+++..+.+++...+.-.....++++..++..+... ..+||.|+....-
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~l 99 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAICHAFL 99 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCCeeEEEECChh
Confidence 3457899999999985544444322 577888999999888776532233478888888766443 3579999998887
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEec
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
.++.+...+++++.++|+|||++.+..
T Consensus 100 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 100 LHMTTPETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp GGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hcCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 888888899999999999999999653
No 150
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.27 E-value=3.9e-06 Score=72.42 Aligned_cols=138 Identities=13% Similarity=0.119 Sum_probs=92.8
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+.+||++|+|.|...............+++..+.+++...+.-. ....++.+..+++.+......+||.|+....-
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESL 139 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechh
Confidence 4567899999999985443333234678888888988887765411 12335788888876654444679999987777
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccCCc-----chhHHh----------hh-HHHHHHHHhcCCeE-EEEEe
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN-----AFFHVV----------YC-HLVSLELENLGFSM-QLIPL 292 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~-----~~~~~~----------y~-~~~~~~l~~~G~~~-~~~~~ 292 (328)
++..+...+++++.++|+|||++.+........ ....+. +. ...+..|+++||++ +++++
T Consensus 140 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 140 HHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp TTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred hhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEEC
Confidence 777778899999999999999998754322110 011111 11 24556789999994 44443
No 151
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.27 E-value=9.7e-06 Score=71.18 Aligned_cols=105 Identities=17% Similarity=0.097 Sum_probs=77.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+.+||++|+|.|..........+....+++..+++++...+... ....++.+..+++.+. ..+||.|+....-
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~ 147 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAF 147 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchH
Confidence 4567899999999985443333323678889999998888766421 1233688888888765 4679999998765
Q ss_pred cch---------hhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 233 EYY---------EDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 233 e~~---------~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
+++ ..+..+++++.++|+|||++.+.....
T Consensus 148 ~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 148 EHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp GGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred HhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 665 455799999999999999999764433
No 152
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.25 E-value=4.2e-06 Score=70.03 Aligned_cols=103 Identities=16% Similarity=0.276 Sum_probs=75.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecC--c
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY--G 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f--~ 232 (328)
....+||++|+|.|..........+ ...+++.++++++.+.+.......++++..++..+......+||.|+.... -
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 3467899999999985544444444 788899999998887664222225677888876664433357999998765 3
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEe
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
.+..+...+++++.++|+|||++.+.
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 44467789999999999999999865
No 153
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.24 E-value=8.3e-06 Score=68.76 Aligned_cols=136 Identities=17% Similarity=0.031 Sum_probs=91.3
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
..+||++|+|.|........ .....++++..+.+++...+.... ...++.+..+++.+..+ ..+||.|+....-.+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP-TELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-SSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-CCCeeEEEEChhhhc
Confidence 45899999999985543333 345678889999999988775432 12457888888766543 247999998766555
Q ss_pred hh--hHHHHHHHHhhccCCCcEEEEeccccCCcc--hhHHhhhHHHHHHHHhcCCeE-EEEEeeC
Q 020270 235 YE--DLREFHQHLPKLLKPGGIYSYFNGLCGGNA--FFHVVYCHLVSLELENLGFSM-QLIPLPV 294 (328)
Q Consensus 235 ~~--~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~--~~~~~y~~~~~~~l~~~G~~~-~~~~~~~ 294 (328)
+. +...+++++.++|+|||++.+...-..... ..+..-....+..|+++||++ +.++++-
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 209 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENPH 209 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecCC
Confidence 55 778999999999999999986432111110 001111236667899999994 4444433
No 154
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.24 E-value=9.4e-06 Score=70.39 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=75.3
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|.|........ ......+++..+.+++.+.+.. .++.+..++...... ..+||.|+.....++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNFRV-DKPLDAVFSNAMLHW 129 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCC-SSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCc-CCCcCEEEEcchhhh
Confidence 3557899999999985443333 3457788899999999887753 456677777665443 367999998776666
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEe
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
..+...+++++.++|+|||++.+.
T Consensus 130 ~~d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 130 VKEPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCHHHHHHHHHHhcCCCcEEEEE
Confidence 678889999999999999999874
No 155
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.23 E-value=2.1e-05 Score=64.51 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=71.5
Q ss_pred ceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccchhhH
Q 020270 159 HILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYYEDL 238 (328)
Q Consensus 159 ~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~~~l 238 (328)
+||++|+|.|......... .....+++..+.+++.+.+.......++.+..++..+.......||.|+....-....+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 110 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLPSSLR 110 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCCHHHH
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCCHHHH
Confidence 9999999999854433332 347888999999988877653221236777777766654344679999984322223567
Q ss_pred HHHHHHHhhccCCCcEEEEec
Q 020270 239 REFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 239 ~~~~~~~~~lL~~gG~~~~~~ 259 (328)
..+++++.++|+|||++.+..
T Consensus 111 ~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 111 QQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp HHHHHHHHTTCCSSEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEE
Confidence 899999999999999998753
No 156
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.22 E-value=1.1e-05 Score=67.81 Aligned_cols=105 Identities=22% Similarity=0.256 Sum_probs=78.8
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|.|.......... ....++++..+.+++...+.-... .++.+..++..+.... .+||.|+....-+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-LKVKYIEADYSKYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-TTEEEEESCTTTCCCC-SCEEEEEEESCGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-CCEEEEeCchhccCCC-CCceEEEEeCccc
Confidence 345789999999998544333332 457888999999999888764322 3788888887776655 7899999987666
Q ss_pred chhhH--HHHHHHHhhccCCCcEEEEeccc
Q 020270 234 YYEDL--REFHQHLPKLLKPGGIYSYFNGL 261 (328)
Q Consensus 234 ~~~~l--~~~~~~~~~lL~~gG~~~~~~~~ 261 (328)
++.+. ..+++++.++|+|||++.+....
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 66543 36999999999999999976533
No 157
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.22 E-value=5e-06 Score=73.23 Aligned_cols=105 Identities=18% Similarity=0.140 Sum_probs=77.3
Q ss_pred hcCCCceeeecccCCcchhHH--hccCCceEEeeccCHHHHHHHHHcCCCC--CCCeeEEecccchhccCCCCCCEEEEe
Q 020270 154 CSGGGHILNIGFGMGLVDTAI--QQYSPVTHTILEAHPEVYERMLRTGWGE--KNNVKIIFGRWQDNLSQLESYDGIFFD 229 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~--~~~~~~~~~a~e~~~~~~~~L~~~g~~~--~~~~~~~~g~w~~~~~~~~~fD~i~~d 229 (328)
...+.+||++|+|.|...... .........+++.++.+++...+..... ..++++..+++.+.... .+||.|+..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 456778999999999854433 2333457888999999999888754322 23488888888776655 789999986
Q ss_pred cCccchhhH---HHHHHHHhhccCCCcEEEEec
Q 020270 230 TYGEYYEDL---REFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 230 ~f~e~~~~l---~~~~~~~~~lL~~gG~~~~~~ 259 (328)
..-.++.+. ..+++++.++|+|||++.+..
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 654444333 348999999999999999754
No 158
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.21 E-value=5.7e-06 Score=70.71 Aligned_cols=100 Identities=12% Similarity=0.083 Sum_probs=76.7
Q ss_pred cCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|.|......... ......+++..+.+++...+. ..++.+..++..+.. ...+||.|+....-.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK-PAQKADLLYANAVFQ 106 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC-CSSCEEEEEEESCGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC-ccCCcCEEEEeCchh
Confidence 34578999999999844332222 234678889999999998876 245777778776655 446799999977666
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEec
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
+..+...+++++.++|+|||++.+..
T Consensus 107 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 107 WVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp GSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 66788899999999999999999754
No 159
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.21 E-value=1.6e-05 Score=69.23 Aligned_cols=102 Identities=17% Similarity=0.184 Sum_probs=75.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+.+||++|+|.|..........+....+++..+++++...+.-. ....++.+..+++.+.. .+||.|+....-
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l 139 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAF 139 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCch
Confidence 3456899999999984433332223478888999998888766421 12346788888876553 679999987766
Q ss_pred cch--hhHHHHHHHHhhccCCCcEEEEec
Q 020270 233 EYY--EDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 233 e~~--~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
+++ .+...+++++.++|+|||++.+..
T Consensus 140 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 140 EHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp GGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 777 677899999999999999998754
No 160
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.20 E-value=4.9e-06 Score=68.92 Aligned_cols=127 Identities=16% Similarity=0.218 Sum_probs=87.5
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|.|......... .....+++..+.+++...+.- ++....+...... ...+||.|+....-++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 114 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD-AIDAYDAVWAHACLLH 114 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC-CCSCEEEEEECSCGGG
T ss_pred CCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC-CCCcEEEEEecCchhh
Confidence 34578999999999854433333 347788899999998887752 3455566665554 4467999999766566
Q ss_pred hh--hHHHHHHHHhhccCCCcEEEEeccccCC--cc---hhHHhhhH-HHHHHHHhcC-CeEE
Q 020270 235 YE--DLREFHQHLPKLLKPGGIYSYFNGLCGG--NA---FFHVVYCH-LVSLELENLG-FSMQ 288 (328)
Q Consensus 235 ~~--~l~~~~~~~~~lL~~gG~~~~~~~~g~~--~~---~~~~~y~~-~~~~~l~~~G-~~~~ 288 (328)
+. ++..+++++.++|+|||++.+....+.. .. ..+..|.. ..+..|+++| |++.
T Consensus 115 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 115 VPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred cCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 54 7789999999999999999876333221 00 11111222 6677899999 9943
No 161
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.19 E-value=6.1e-06 Score=72.19 Aligned_cols=133 Identities=17% Similarity=0.145 Sum_probs=90.9
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
....+||++|+|.|...............+++..+.+++...+.. .....++.+..+++.+......+||.|+.....
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 456789999999998443333222347888888898887776532 112346788888877655444679999998777
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccCC------cchhHHhh------h-HHHHHHHHhcCCeE
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGG------NAFFHVVY------C-HLVSLELENLGFSM 287 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~------~~~~~~~y------~-~~~~~~l~~~G~~~ 287 (328)
+++.+...+++++.++|+|||++.+....... ...++..+ . ...+..|+++||.+
T Consensus 161 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 228 (297)
T 2o57_A 161 LHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVT 228 (297)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeE
Confidence 88888889999999999999999876432221 11111111 1 14455789999993
No 162
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.19 E-value=2.2e-05 Score=66.39 Aligned_cols=126 Identities=14% Similarity=0.091 Sum_probs=86.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhc--cCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNL--SQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~--~~~~~fD~i~~d~f~ 232 (328)
..+.+||++|+|.|......... .....+++..+++++...+. +....++..+.. ....+||.|+....-
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l 111 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHFV 111 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESCG
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCch
Confidence 35578999999999854333332 23568889999999988764 666667665543 223679999998777
Q ss_pred cchh--hHHHHHHHHhhccCCCcEEEEeccccCCcchhHH---------hhh-HHHHHHHHhcCCeEE
Q 020270 233 EYYE--DLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHV---------VYC-HLVSLELENLGFSMQ 288 (328)
Q Consensus 233 e~~~--~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~---------~y~-~~~~~~l~~~G~~~~ 288 (328)
+++. ++..+++++.++|+|||++.+...-........+ .+. ...+..|+++||++.
T Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 112 EHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp GGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred hhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 7776 6689999999999999999875332211100000 111 356668999999943
No 163
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.15 E-value=1.4e-05 Score=63.64 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=75.5
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|.|........... ...+++..+++++...+. ..++....++ ......+||.|+....-++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK----FDSVITLSDP---KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH----CTTSEEESSG---GGSCTTCEEEEEEESCSTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh----CCCcEEEeCC---CCCCCCceEEEEEccchhc
Confidence 4556899999999985544433333 788899999999999886 3467777766 2223357999999888788
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEec
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
+.+...+++++.++|+|||++.+..
T Consensus 88 ~~~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 88 MDDKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHhcCCCCEEEEEE
Confidence 8888899999999999999999863
No 164
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.15 E-value=2.7e-05 Score=65.53 Aligned_cols=127 Identities=18% Similarity=0.166 Sum_probs=83.5
Q ss_pred CCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccch----hccCCCCCCEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQD----NLSQLESYDGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~----~~~~~~~fD~i~~d~ 230 (328)
.+..||++|+|+|.......... ....++++-.+++++.+.++.. ...++....++..+ .... ..||.|+.+.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~~ 151 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACA-ERENIIPILGDANKPQEYANIV-EKVDVIYEDV 151 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTT-TCTTEEEEECCTTCGGGGTTTS-CCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhh-cCCCeEEEECCCCCcccccccC-ccEEEEEEec
Confidence 45689999999998544333222 3578889999999998877532 23678887777654 2222 6799999764
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEe-ccccCC-cchhHHhhhHHHHHHHHhcCCeE
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYF-NGLCGG-NAFFHVVYCHLVSLELENLGFSM 287 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~-~~~g~~-~~~~~~~y~~~~~~~l~~~G~~~ 287 (328)
. .......+++++.++|+|||++.+. ...+.. ......++...++ .|+++||++
T Consensus 152 ~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~ 207 (230)
T 1fbn_A 152 A--QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKI 207 (230)
T ss_dssp C--STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEE
T ss_pred C--ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEE
Confidence 2 1222347899999999999999984 111111 1112233445566 789999984
No 165
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.14 E-value=7.9e-06 Score=72.15 Aligned_cols=136 Identities=12% Similarity=0.083 Sum_probs=90.7
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
.+.+||++|+|.|...............+++..+++++...+.-. ....++.+..++..+......+||.|+....-+
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchh
Confidence 456899999999984433322213567888999998887766321 123468888888776554446899999876656
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccccCCc----chhHH----h-----hh-HHHHHHHHhcCCe-EEEEEe
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN----AFFHV----V-----YC-HLVSLELENLGFS-MQLIPL 292 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~----~~~~~----~-----y~-~~~~~~l~~~G~~-~~~~~~ 292 (328)
++ +...+++++.++|+|||++.+........ ..... . +. ...+..|+++||+ ++.+++
T Consensus 197 ~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 197 YV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp GS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred hC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 66 58899999999999999999764322221 11111 1 11 2456688999999 444443
No 166
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.13 E-value=1.2e-05 Score=68.15 Aligned_cols=130 Identities=15% Similarity=0.183 Sum_probs=87.7
Q ss_pred CCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhccC---CCCCCEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLSQ---LESYDGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~~---~~~fD~i~~d~ 230 (328)
...+||++|+|+|........ ......++++..+++++.+.++-.. .-.++++..++..+.... ..+||.|+.+.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 457899999999984433332 2335678899999888887653110 012588888988776532 35799999987
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEE-EEEeeCC
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQ-LIPLPVK 295 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~-~~~~~~~ 295 (328)
+ .++..+++.+.++|+|||++.++.+..... . .......|+.+||.+. ...+.++
T Consensus 150 ~----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~-----~-~~~~~~~l~~~g~~~~~~~~~~~~ 205 (240)
T 1xdz_A 150 V----ARLSVLSELCLPLVKKNGLFVALKAASAEE-----E-LNAGKKAITTLGGELENIHSFKLP 205 (240)
T ss_dssp C----SCHHHHHHHHGGGEEEEEEEEEEECC-CHH-----H-HHHHHHHHHHTTEEEEEEEEEECT
T ss_pred c----CCHHHHHHHHHHhcCCCCEEEEEeCCCchH-----H-HHHHHHHHHHcCCeEeEEEEEecC
Confidence 5 346699999999999999999875432211 1 1233447888999854 4445553
No 167
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.13 E-value=1.4e-05 Score=66.45 Aligned_cols=130 Identities=12% Similarity=0.205 Sum_probs=88.3
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhc--cCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNL--SQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~--~~~~~fD~i~~d~ 230 (328)
.....+|++|+|.|.......... ....++++.++.+++.+.++-... -.++.+..+++.+.. ....+||.|+.+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~- 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN- 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE-
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEE-
Confidence 345789999999998544333333 357889999999988876632111 146888888877644 223579999987
Q ss_pred Cccchhh---------HHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEee
Q 020270 231 YGEYYED---------LREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLP 293 (328)
Q Consensus 231 f~e~~~~---------l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~ 293 (328)
+|..|.. ...+++++.++|+|||++.+.+. .. .|...+...|.+.||.+.....+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~----~~----~~~~~~~~~~~~~g~~~~~~~~d 182 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD----NR----GLFEYSLVSFSQYGMKLNGVWLD 182 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES----CH----HHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC----CH----HHHHHHHHHHHHCCCeeeecccc
Confidence 5655421 24799999999999999987542 11 23344455678889986655443
No 168
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.10 E-value=1.8e-05 Score=66.08 Aligned_cols=109 Identities=20% Similarity=0.264 Sum_probs=79.7
Q ss_pred cCCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCC------CCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQL------ESYD 224 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~------~~fD 224 (328)
....+||++|+|.|......... .....++++.++++++...++-. ....++++..++..+.+..+ .+||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 35678999999999855433332 24578889999999888766311 11235888888876655443 4799
Q ss_pred EEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccCC
Q 020270 225 GIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGG 264 (328)
Q Consensus 225 ~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~ 264 (328)
.|+.|.....+....+++..+ ++|+|||++.+.+.....
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~ 175 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPG 175 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCC
T ss_pred EEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcc
Confidence 999999877887766788888 999999999987665443
No 169
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.09 E-value=5.3e-05 Score=61.36 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=88.0
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEe-cCc
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFD-TYG 232 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d-~f~ 232 (328)
.....+||++|+|.|......... .....+++.++.+++.+.+.. .++.+..++..+.......||.|+.. ..-
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~ 118 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF----PEARWVVGDLSVDQISETDFDLIVSAGNVM 118 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC----TTSEEEECCTTTSCCCCCCEEEEEECCCCG
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC----CCCcEEEcccccCCCCCCceeEEEECCcHH
Confidence 456778999999999844333332 347888999999999988754 24677777766544334579999987 333
Q ss_pred cch--hhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEE
Q 020270 233 EYY--EDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIP 291 (328)
Q Consensus 233 e~~--~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~ 291 (328)
.+. ++...+++++.++|+|||++.+........ ........|+++||+++...
T Consensus 119 ~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 119 GFLAEDGREPALANIHRALGADGRAVIGFGAGRGW------VFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSC------CHHHHHHHHHHHTEEEEEEE
T ss_pred hhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCc------CHHHHHHHHHHcCCEEeeee
Confidence 333 456799999999999999998754332210 12245567889999965543
No 170
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.09 E-value=2.1e-05 Score=65.55 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=72.3
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchh---ccCC-CCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDN---LSQL-ESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~---~~~~-~~fD~i~~d~ 230 (328)
....+||++|+|.|......... .....+++..+.+++...+. ..+....+...+. .... ..||.|+...
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECc
Confidence 34588999999999855443333 34788899999999999886 3455555665554 2222 3599999876
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEe
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
.-+ ..+...+++++.++|+|||++.+.
T Consensus 125 ~l~-~~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 125 ALL-HQDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp CCC-SSCCHHHHHHHHHTEEEEEEEEEE
T ss_pred hhh-hhhHHHHHHHHHHHhCCCeEEEEE
Confidence 555 677789999999999999999974
No 171
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.09 E-value=1.8e-05 Score=66.43 Aligned_cols=115 Identities=13% Similarity=0.136 Sum_probs=82.4
Q ss_pred hhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccch-hccC-CCCCCEEEEec
Q 020270 153 ICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQD-NLSQ-LESYDGIFFDT 230 (328)
Q Consensus 153 ~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~-~~~~-~~~fD~i~~d~ 230 (328)
....+.+||++|+|+|......... ....++++..+.+++...+. ..++++..+++.+ .... ..+||.|+...
T Consensus 45 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~ 119 (226)
T 3m33_A 45 LLTPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN----APHADVYEWNGKGELPAGLGAPFGLIVSRR 119 (226)
T ss_dssp HCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH----CTTSEEEECCSCSSCCTTCCCCEEEEEEES
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh----CCCceEEEcchhhccCCcCCCCEEEEEeCC
Confidence 3456788999999999954433333 34788899999999999886 3467888888743 3333 35799999872
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeE
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSM 287 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~ 287 (328)
+...+++++.++|+|||++....+.... ......|+++||.+
T Consensus 120 ------~~~~~l~~~~~~LkpgG~l~~~~~~~~~---------~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 120 ------GPTSVILRLPELAAPDAHFLYVGPRLNV---------PEVPERLAAVGWDI 161 (226)
T ss_dssp ------CCSGGGGGHHHHEEEEEEEEEEESSSCC---------THHHHHHHHTTCEE
T ss_pred ------CHHHHHHHHHHHcCCCcEEEEeCCcCCH---------HHHHHHHHHCCCeE
Confidence 2337888999999999999943332221 23456789999994
No 172
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.08 E-value=2.3e-05 Score=67.12 Aligned_cols=133 Identities=15% Similarity=0.144 Sum_probs=86.2
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCC------------------------------C
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKN------------------------------N 205 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~------------------------------~ 205 (328)
.+.+||++|+|.|..........+...++++..+.+++.+.+.-..... .
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 3467999999999854433333334778888999988888664321110 1
Q ss_pred e-eEEecccchhcc-CC---CCCCEEEEecCcc----chhhHHHHHHHHhhccCCCcEEEEeccccCCc------chhHH
Q 020270 206 V-KIIFGRWQDNLS-QL---ESYDGIFFDTYGE----YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN------AFFHV 270 (328)
Q Consensus 206 ~-~~~~g~w~~~~~-~~---~~fD~i~~d~f~e----~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~------~~~~~ 270 (328)
+ .+..++..+... .. .+||.|+....-+ +..++..+++++.++|+|||++.+....+... ...+-
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~ 215 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSL 215 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccccc
Confidence 5 666666554332 22 5799999866544 56678899999999999999998765443221 00000
Q ss_pred hhh-HHHHHHHHhcCCeEE
Q 020270 271 VYC-HLVSLELENLGFSMQ 288 (328)
Q Consensus 271 ~y~-~~~~~~l~~~G~~~~ 288 (328)
.+. ..++..|+++||++.
T Consensus 216 ~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 216 PLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp CCCHHHHHHHHHHTTCEEE
T ss_pred ccCHHHHHHHHHHCCCEEE
Confidence 112 256678999999944
No 173
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.08 E-value=1.6e-05 Score=70.36 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=75.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+.+||++|+|.|...............+++..+++++...+... .....+.+..+++.+.. .+||.|+....-
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l 165 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAF 165 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChH
Confidence 3456899999999984433222213478888999998888776421 12245778778776653 579999987766
Q ss_pred cch--hhHHHHHHHHhhccCCCcEEEEecc
Q 020270 233 EYY--EDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 233 e~~--~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
++. ++...+++++.++|+|||++.+...
T Consensus 166 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 166 EHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp GGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 666 6778999999999999999997543
No 174
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.08 E-value=1.4e-05 Score=68.58 Aligned_cols=97 Identities=15% Similarity=0.220 Sum_probs=75.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....++|++|||+|.......... ....+++..+.+++.. ...+++....+..++....-.+||.|+.. ..-+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~-~~v~gvD~s~~ml~~a-----~~~~~v~~~~~~~e~~~~~~~sfD~v~~~-~~~h 110 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF-ERVHAVDPGEAQIRQA-----LRHPRVTYAVAPAEDTGLPPASVDVAIAA-QAMH 110 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC-SEEEEEESCHHHHHTC-----CCCTTEEEEECCTTCCCCCSSCEEEEEEC-SCCT
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC-CEEEEEeCcHHhhhhh-----hhcCCceeehhhhhhhcccCCcccEEEEe-eehh
Confidence 445789999999998554444333 4678888888887643 23567888888888776666789999884 4458
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEe
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
|.+...+++++.++|||||+|+++
T Consensus 111 ~~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 111 WFDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp TCCHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhhHHHHHHHHHHHcCCCCEEEEE
Confidence 888889999999999999999875
No 175
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.06 E-value=1.6e-05 Score=69.65 Aligned_cols=102 Identities=16% Similarity=0.186 Sum_probs=73.3
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC----CCeeEEecccchhccCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK----NNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~----~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
....+||++|+|.|......... ....++++..+.+++...+.-.... .++.+..++..+... ..+||.|++..
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~ 158 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISS 158 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECH
T ss_pred CCCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECC
Confidence 44459999999999955433333 3467888999999998877533222 568888888776544 46799888643
Q ss_pred Cccch---hhHHHHHHHHhhccCCCcEEEEe
Q 020270 231 YGEYY---EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 231 f~e~~---~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
...++ ++...+++++.++|+|||++.+.
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 159 GSINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 32222 24679999999999999999874
No 176
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.05 E-value=7.3e-05 Score=64.20 Aligned_cols=108 Identities=15% Similarity=0.311 Sum_probs=75.3
Q ss_pred hhcCCCceeeecccCCcchhHHhcc---CCceEEeeccCHHHHHHHHHc--CCCCCCCeeEEecccchhccCCCCCCEEE
Q 020270 153 ICSGGGHILNIGFGMGLVDTAIQQY---SPVTHTILEAHPEVYERMLRT--GWGEKNNVKIIFGRWQDNLSQLESYDGIF 227 (328)
Q Consensus 153 ~~~~~~~iLe~g~~~g~~~~~~~~~---~~~~~~a~e~~~~~~~~L~~~--g~~~~~~~~~~~g~w~~~~~~~~~fD~i~ 227 (328)
....+.+||++|||+|......... .....++++..+.+++...+. ......++++..++..+.. .+.||.|+
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~--~~~~d~v~ 144 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA--IENASMVV 144 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC--CCSEEEEE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc--ccccccce
Confidence 3466789999999999744333221 234678899999999887664 2334457888888876643 34689887
Q ss_pred EecCccch--hhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 228 FDTYGEYY--EDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 228 ~d~f~e~~--~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
....-.+. .+...++++++++|+|||+|.+.....
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 75432222 344579999999999999999864443
No 177
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.05 E-value=4.6e-05 Score=63.52 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=89.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhcc--CCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLS--QLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~--~~~~fD~i~~d~f~ 232 (328)
....+||++|+|.|......... +....+++.++.+++...+.. .....++..+... ....||.|+....-
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVIFGDVL 103 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEEEESCG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEEECChh
Confidence 34578999999999855444443 467888999999999887643 2455555544222 22579999998777
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccCCc--------------------chhHHhhh-HHHHHHHHhcCCe-EEEE
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN--------------------AFFHVVYC-HLVSLELENLGFS-MQLI 290 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~--------------------~~~~~~y~-~~~~~~l~~~G~~-~~~~ 290 (328)
+++.+...+++++.++|+|||++.+........ ......|. ...+..|+++||+ ++.+
T Consensus 104 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 183 (230)
T 3cc8_A 104 EHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVD 183 (230)
T ss_dssp GGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEE
Confidence 777778899999999999999998743111000 00000122 2566689999999 4555
Q ss_pred EeeC
Q 020270 291 PLPV 294 (328)
Q Consensus 291 ~~~~ 294 (328)
.+..
T Consensus 184 ~~~~ 187 (230)
T 3cc8_A 184 RVYV 187 (230)
T ss_dssp EEEC
T ss_pred eccc
Confidence 5555
No 178
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.05 E-value=1.6e-05 Score=64.33 Aligned_cols=128 Identities=20% Similarity=0.247 Sum_probs=88.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
.....+|++|+|.|.......... ....+++.+++.++.+.+.- .....++.+..+++.+.......||.|+.+...
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSG 110 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCch
Confidence 456789999999998544333333 67888899999888876631 112246778888876644444579999987543
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
+ .+..+++.+.++|+|||++.+..... -........|++.||.++..++.+
T Consensus 111 ~---~~~~~l~~~~~~l~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~~~~~~~ 161 (192)
T 1l3i_A 111 G---ELQEILRIIKDKLKPGGRIIVTAILL--------ETKFEAMECLRDLGFDVNITELNI 161 (192)
T ss_dssp T---CHHHHHHHHHHTEEEEEEEEEEECBH--------HHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred H---HHHHHHHHHHHhcCCCcEEEEEecCc--------chHHHHHHHHHHCCCceEEEEEEc
Confidence 3 34589999999999999998643211 111234456889999887777665
No 179
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.04 E-value=3.7e-05 Score=67.13 Aligned_cols=138 Identities=19% Similarity=0.153 Sum_probs=85.4
Q ss_pred CCCceeeecccCCcchh----HH-hccCCc--eEEeeccCHHHHHHHHHcCCC--CCCCe--eEEecccchhc------c
Q 020270 156 GGGHILNIGFGMGLVDT----AI-QQYSPV--THTILEAHPEVYERMLRTGWG--EKNNV--KIIFGRWQDNL------S 218 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~----~~-~~~~~~--~~~a~e~~~~~~~~L~~~g~~--~~~~~--~~~~g~w~~~~------~ 218 (328)
...+||++|+|+|.... .. ...... ...+++..+++++...+.-.. ...++ ....+..++.. .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 34689999999995221 11 111222 348899999999987764211 11233 33344444433 1
Q ss_pred CCCCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccCC-cchhHHh-------------h-hHHHHHHHHhc
Q 020270 219 QLESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGG-NAFFHVV-------------Y-CHLVSLELENL 283 (328)
Q Consensus 219 ~~~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~-~~~~~~~-------------y-~~~~~~~l~~~ 283 (328)
...+||.|+.-.--.++.++..+++++.++|||||++.+....... ....+.. + .......|+++
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 211 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNL 211 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHH
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHC
Confidence 2357999998777778888999999999999999999975221110 0011111 1 12456689999
Q ss_pred CCeEEEEEee
Q 020270 284 GFSMQLIPLP 293 (328)
Q Consensus 284 G~~~~~~~~~ 293 (328)
||+++....+
T Consensus 212 Gf~~~~~~~~ 221 (292)
T 2aot_A 212 GLKYECYDLL 221 (292)
T ss_dssp TCCEEEEEEC
T ss_pred CCceEEEEec
Confidence 9997654443
No 180
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.03 E-value=4.8e-05 Score=64.41 Aligned_cols=102 Identities=14% Similarity=0.061 Sum_probs=75.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC-----CCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL-----ESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~-----~~fD~i~~d 229 (328)
....+||++|+|+|..........+ ..++++..+.+++...+.. ...++++..++..+..... ..||.|+..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKEN--TAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHS--CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhC--cccCceEEECcccccccccccccccCccEEEEc
Confidence 4557899999999985544333333 6788899999999988765 2346788777765533221 248999998
Q ss_pred cCccchh--hHHHHHHHHhhccCCCcEEEEec
Q 020270 230 TYGEYYE--DLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 230 ~f~e~~~--~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
....+.. +...+++++.++|+|||++.+..
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 7766665 77899999999999999977653
No 181
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.02 E-value=8.6e-05 Score=64.27 Aligned_cols=135 Identities=18% Similarity=0.136 Sum_probs=92.0
Q ss_pred cCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcC-----CCCCCCeeEEecccchhccC-CCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTG-----WGEKNNVKIIFGRWQDNLSQ-LESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g-----~~~~~~~~~~~g~w~~~~~~-~~~fD~i~ 227 (328)
....++|++|+|.|......... ......++|-.+++++...+.- .-..++++++.++..+.+.. -..||.|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35678999999999865544444 3357888999999999887642 12346788888886554432 25799999
Q ss_pred EecCcc------chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCC
Q 020270 228 FDTYGE------YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVK 295 (328)
Q Consensus 228 ~d~f~e------~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~ 295 (328)
.|.+.. .++. +|++.+.+.|+|||++++.++-..... +.+ ..+...|++..-.++...+.|+
T Consensus 154 ~d~~~~~~~~~~l~~~--~~~~~~~~~L~pgG~lv~~~~~~~~~~---~~~-~~~~~~l~~~F~~v~~~~~~vp 221 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTK--GFYAGIAKALKEDGIFVAQTDNPWFTP---ELI-TNVQRDVKEIFPITKLYTANIP 221 (275)
T ss_dssp ESCSSCCSCCCCCSTT--HHHHHHHHHEEEEEEEEEECCCTTTCH---HHH-HHHHHHHHTTCSEEEEEEECCT
T ss_pred ECCCCCCCcchhhhHH--HHHHHHHHhcCCCcEEEEEcCCccccH---HHH-HHHHHHHHHhCCCeEEEEEecC
Confidence 998732 1233 999999999999999998754321111 111 2334457777555777777663
No 182
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.01 E-value=1.6e-05 Score=65.50 Aligned_cols=122 Identities=11% Similarity=0.082 Sum_probs=83.6
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
.....+||++|+|.|...............+++..+.+++...+.-... ..++++..+++.+... ..||.|+.+...
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVD--GKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCC--SCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCC--CCceEEEECCcH
Confidence 4567889999999998544334333447888999999888876642111 1127788887765433 579999998653
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEE
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQ 288 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~ 288 (328)
+ .+..+++++.++|+|||++.+..-... -.......|+++||++.
T Consensus 136 ~---~~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 136 E---ILLDLIPQLDSHLNEDGQVIFSGIDYL--------QLPKIEQALAENSFQID 180 (205)
T ss_dssp H---HHHHHGGGSGGGEEEEEEEEEEEEEGG--------GHHHHHHHHHHTTEEEE
T ss_pred H---HHHHHHHHHHHhcCCCCEEEEEecCcc--------cHHHHHHHHHHcCCceE
Confidence 3 345899999999999999986322111 12245567899999843
No 183
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.01 E-value=8.5e-05 Score=61.25 Aligned_cols=124 Identities=16% Similarity=0.132 Sum_probs=84.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+..||++|+|+|......... ....++++.++++++.+.++- .....++.+..++..+.+.....||.|+.+.-
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~- 131 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG- 131 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-
Confidence 45678999999999854333333 557888999999998876642 11122688888888776666667999998762
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEe
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPL 292 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~ 292 (328)
. +.. +++++.++|+|||++.+...... ........|++.|+++....+
T Consensus 132 ~---~~~-~l~~~~~~LkpgG~lv~~~~~~~--------~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 132 G---SQA-LYDRLWEWLAPGTRIVANAVTLE--------SETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp C---CHH-HHHHHHHHSCTTCEEEEEECSHH--------HHHHHHHHHHHHCSEEEEEEE
T ss_pred c---cHH-HHHHHHHhcCCCcEEEEEecCcc--------cHHHHHHHHHhCCCcEEEEEe
Confidence 2 344 99999999999999996433111 111334468888977554433
No 184
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.01 E-value=2.1e-05 Score=67.18 Aligned_cols=131 Identities=17% Similarity=0.177 Sum_probs=90.3
Q ss_pred CCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccC---CCCCCEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQ---LESYDGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~---~~~fD~i~~d~ 230 (328)
...+||++|+|.|........ ......++++..+..++.+.++-... -.++++..+++++.... .++||.|+..+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 457899999999985433222 23456788899998888876642111 12488999998877643 26799999987
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe-EEEEEeeCCC
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS-MQLIPLPVKN 296 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~-~~~~~~~~~~ 296 (328)
+. ++..+++.+.++|+|||+|.++.|...... -..++..++..||. ++-.++.++.
T Consensus 160 ~~----~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e------~~~~~~~l~~~G~~~~~~~~~~~p~ 216 (249)
T 3g89_A 160 VA----PLCVLSELLLPFLEVGGAAVAMKGPRVEEE------LAPLPPALERLGGRLGEVLALQLPL 216 (249)
T ss_dssp SC----CHHHHHHHHGGGEEEEEEEEEEECSCCHHH------HTTHHHHHHHHTEEEEEEEEEECTT
T ss_pred cC----CHHHHHHHHHHHcCCCeEEEEEeCCCcHHH------HHHHHHHHHHcCCeEEEEEEeeCCC
Confidence 64 355899999999999999998775432211 11344567888998 4556666643
No 185
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.00 E-value=3.8e-05 Score=62.05 Aligned_cols=109 Identities=10% Similarity=0.076 Sum_probs=72.8
Q ss_pred hhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccC-CCCCCEEEEe-
Q 020270 153 ICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQ-LESYDGIFFD- 229 (328)
Q Consensus 153 ~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~-~~~fD~i~~d- 229 (328)
....+..+|++|+|+|......... ....++++.++++++...++-... -.++++..+........ -.+||.|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 3355678999999999855444433 567889999999988876542111 14577777666554322 3579999988
Q ss_pred cC-cc-------chhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 230 TY-GE-------YYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 230 ~f-~e-------~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.+ +. ...+...+++++.++|+|||++.+....+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 33 22 33455688899999999999998754433
No 186
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.99 E-value=4.1e-05 Score=66.87 Aligned_cols=103 Identities=20% Similarity=0.354 Sum_probs=72.5
Q ss_pred CCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCCC--------------------------------
Q 020270 156 GGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWGE-------------------------------- 202 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~~-------------------------------- 202 (328)
...+||++|||.|........ ......++++-.+.+++...+.-...
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 357899999999985443333 23567888999999999887652110
Q ss_pred ---------------------------CCCeeEEecccchhc-----cCCCCCCEEEEecCccch------hhHHHHHHH
Q 020270 203 ---------------------------KNNVKIIFGRWQDNL-----SQLESYDGIFFDTYGEYY------EDLREFHQH 244 (328)
Q Consensus 203 ---------------------------~~~~~~~~g~w~~~~-----~~~~~fD~i~~d~f~e~~------~~l~~~~~~ 244 (328)
+.++.+..+++.... ....+||+|+......+. +++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 036777777765322 123679999987654322 267899999
Q ss_pred HhhccCCCcEEEEe
Q 020270 245 LPKLLKPGGIYSYF 258 (328)
Q Consensus 245 ~~~lL~~gG~~~~~ 258 (328)
+.++|+|||+|.+-
T Consensus 206 ~~~~LkpGG~lil~ 219 (292)
T 3g07_A 206 IYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHEEEEEEEEEE
T ss_pred HHHHhCCCcEEEEe
Confidence 99999999999974
No 187
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.99 E-value=6.3e-05 Score=64.44 Aligned_cols=98 Identities=12% Similarity=0.099 Sum_probs=74.1
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEec-Ccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDT-YGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~-f~e 233 (328)
....+||++|+|.|.......... ....+++..+++++...+.. .++.+..++..+... ..+||.|+... .-+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~ 122 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF-GTVEGLELSADMLAIARRRN----PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIG 122 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS-SEEEEEESCHHHHHHHHHHC----TTSEEEECCTTTCCC-SCCEEEEEECTTGGG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhC----CCCEEEECChHHCCc-cCCcCEEEEcCchhh
Confidence 455789999999998554443332 36788899999999988753 267788887766544 46799999864 333
Q ss_pred ch---hhHHHHHHHHhhccCCCcEEEEe
Q 020270 234 YY---EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 234 ~~---~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+. +++..+++++.++|+|||++.+-
T Consensus 123 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 123 HLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp GSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 33 47779999999999999999974
No 188
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.98 E-value=7.3e-05 Score=64.94 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=88.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC-C--C--------CCCCeeEEecccchhccCCCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG-W--G--------EKNNVKIIFGRWQDNLSQLESY 223 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g-~--~--------~~~~~~~~~g~w~~~~~~~~~f 223 (328)
....+||++|+|.|...............+++..+++++...+.- . . ...+++++.++..+.+.....|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 456789999999998554444443457888999999999887653 1 1 2457888888755433223579
Q ss_pred CEEEEecCc-----c-chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCCC
Q 020270 224 DGIFFDTYG-----E-YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVKN 296 (328)
Q Consensus 224 D~i~~d~f~-----e-~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~~ 296 (328)
|.|+.|.+. + .+. .+|++.+.++|+|||++++.++.--.... .+ ..+...|++..-.++.....++.
T Consensus 154 D~Ii~d~~~~~~~~~~l~~--~~~l~~~~~~L~pgG~lv~~~~~~~~~~~---~~-~~~~~~l~~~f~~v~~~~~~vP~ 226 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFS--EEFYRYVYDALNNPGIYVTQAGSVYLFTD---EL-ISAYKEMKKVFDRVYYYSFPVIG 226 (281)
T ss_dssp EEEEEECCCCC-----TTS--HHHHHHHHHHEEEEEEEEEEEEETTTSHH---HH-HHHHHHHHHHCSEEEEEEECCTT
T ss_pred eEEEECCCCCCCcchhhhH--HHHHHHHHHhcCCCcEEEEEcCCcccCHH---HH-HHHHHHHHHHCCceEEEEEecCC
Confidence 999999872 1 122 48999999999999999986432111111 11 22333466654457777766643
No 189
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.97 E-value=0.00015 Score=60.42 Aligned_cols=106 Identities=23% Similarity=0.183 Sum_probs=75.7
Q ss_pred cCCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCC-----CCCCE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQL-----ESYDG 225 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~-----~~fD~ 225 (328)
....+||++|+|+|.......... ....++++.+++.++...++- ......+++..++..+....+ ..||.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 356789999999998554444332 357788899998887765431 112345888888865544332 46999
Q ss_pred EEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccC
Q 020270 226 IFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 226 i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
|+.|.....+ ..+++++.++|+|||++.+.+....
T Consensus 137 v~~d~~~~~~---~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 137 IFIDADKQNN---PAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp EEECSCGGGH---HHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred EEEcCCcHHH---HHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 9999875443 4899999999999999998766544
No 190
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.97 E-value=6.1e-05 Score=63.32 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=70.8
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEec-Ccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDT-YGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~-f~e 233 (328)
....+||++|+|.|..........+ ...+++..+.+++...+.. .++.+..++..+... ...||.|+... ..+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~ 112 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL----PDATLHQGDMRDFRL-GRKFSAVVSMFSSVG 112 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC----TTCEEEECCTTTCCC-SSCEEEEEECTTGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC----CCCEEEECCHHHccc-CCCCcEEEEcCchHh
Confidence 4567899999999984433332223 6788899999999988753 346777777665443 45799999422 222
Q ss_pred ch---hhHHHHHHHHhhccCCCcEEEEe
Q 020270 234 YY---EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 234 ~~---~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+. +++..+++++.++|+|||++.+.
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 113 YLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp GCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 33 56779999999999999999875
No 191
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.96 E-value=8.9e-06 Score=68.17 Aligned_cols=101 Identities=22% Similarity=0.198 Sum_probs=74.9
Q ss_pred ceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcC--CCCC-CCeeEEecccchhccCC--CCCCEEEEecC
Q 020270 159 HILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTG--WGEK-NNVKIIFGRWQDNLSQL--ESYDGIFFDTY 231 (328)
Q Consensus 159 ~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g--~~~~-~~~~~~~g~w~~~~~~~--~~fD~i~~d~f 231 (328)
++|++|+|+|......... .....++++.++++++...++- .... .++++..++..+.+..+ ++||.||.|..
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~ 138 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVS 138 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCc
Confidence 8999999999844333322 2357888999998887775531 1122 46888888877766554 67999999987
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
...+. .+++++.++|+|||++.+-+.+.
T Consensus 139 ~~~~~---~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 139 PMDLK---ALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp TTTHH---HHHHHHHHHEEEEEEEEETTTTG
T ss_pred HHHHH---HHHHHHHHHcCCCcEEEEeCCCC
Confidence 66554 78999999999999999866654
No 192
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.96 E-value=3.9e-05 Score=64.30 Aligned_cols=133 Identities=19% Similarity=0.158 Sum_probs=85.9
Q ss_pred hhcCCCceeeeccc-CCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccC-CCCCCEEEEec
Q 020270 153 ICSGGGHILNIGFG-MGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQ-LESYDGIFFDT 230 (328)
Q Consensus 153 ~~~~~~~iLe~g~~-~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~-~~~fD~i~~d~ 230 (328)
....+.+||++|+| .|...............+++.++.+++.+.++-.....++++..+++...... -..||.|+.+.
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 34567899999999 99844322222145788899999998887664211122677888875322211 25799999873
Q ss_pred Cc-------------------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEE
Q 020270 231 YG-------------------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIP 291 (328)
Q Consensus 231 f~-------------------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~ 291 (328)
-- .....+..+++++.++|+|||++.+....+.. ....+...|++.||.++-..
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-------~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEK-------LLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHH-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHh-------HHHHHHHHHHHcCCceEEEE
Confidence 21 11122468999999999999999975432211 11234456889999876655
Q ss_pred e
Q 020270 292 L 292 (328)
Q Consensus 292 ~ 292 (328)
.
T Consensus 205 ~ 205 (230)
T 3evz_A 205 F 205 (230)
T ss_dssp E
T ss_pred e
Confidence 4
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.93 E-value=0.00018 Score=62.91 Aligned_cols=138 Identities=18% Similarity=0.176 Sum_probs=86.5
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcC------CCCCCCeeEEecccchhccC-CCCCCEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTG------WGEKNNVKIIFGRWQDNLSQ-LESYDGI 226 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g------~~~~~~~~~~~g~w~~~~~~-~~~fD~i 226 (328)
....+||++|+|.|.......... .....+++-.+++++...+.- .-..+++++..++....+.. .++||.|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 456789999999998654444443 346778899999988876632 12346788888886655443 3579999
Q ss_pred EEecCccchh--hH--HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCCC
Q 020270 227 FFDTYGEYYE--DL--REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVKN 296 (328)
Q Consensus 227 ~~d~f~e~~~--~l--~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~~ 296 (328)
+.|.+..... .+ ++|++.+.++|+|||++++..+-.-.... .+..+ ...|++..-.+....+.|+.
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~---~~~~~-~~~l~~~F~~v~~~~~~vp~ 231 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQE---EAIDS-HRKLSHYFSDVGFYQAAIPT 231 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCH---HHHHH-HHHHHHHCSEEEEEEEECTT
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchH---HHHHH-HHHHHHHCCCeEEEEEEecc
Confidence 9988732111 11 48999999999999999976532111111 22222 23466664457777777743
No 194
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.92 E-value=4.4e-05 Score=64.39 Aligned_cols=101 Identities=18% Similarity=0.260 Sum_probs=77.9
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
...+||++|+|.|...............+++..+.+++...+.... .++.+..++.........+||.|+....-+++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 4578999999999854433333233788899999999999886532 46778888776654444679999987766777
Q ss_pred hhHHHHHHHHhhccCCCcEEEEe
Q 020270 236 EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 236 ~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
.+...+++++.++|+|||++.+.
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred chHHHHHHHHHHhcCcCcEEEEE
Confidence 78889999999999999999874
No 195
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.92 E-value=1.8e-05 Score=63.49 Aligned_cols=121 Identities=15% Similarity=0.102 Sum_probs=77.5
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhcc---CCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLS---QLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~---~~~~fD~i~~d~f 231 (328)
..+.++|.+|+|.. .++..+.+++.+.+... ..+++..++..+... ...+||.|+....
T Consensus 11 ~~g~~vL~~~~g~v---------------~vD~s~~ml~~a~~~~~---~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 72 (176)
T 2ld4_A 11 SAGQFVAVVWDKSS---------------PVEALKGLVDKLQALTG---NEGRVSVENIKQLLQSAHKESSFDIILSGLV 72 (176)
T ss_dssp CTTSEEEEEECTTS---------------CHHHHHHHHHHHHHHTT---TTSEEEEEEGGGGGGGCCCSSCEEEEEECCS
T ss_pred CCCCEEEEecCCce---------------eeeCCHHHHHHHHHhcc---cCcEEEEechhcCccccCCCCCEeEEEECCh
Confidence 34567788877631 14455677777766532 137777777776654 4467999998544
Q ss_pred ccch-hhHHHHHHHHhhccCCCcEEEEeccccCCcc-hhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 232 GEYY-EDLREFHQHLPKLLKPGGIYSYFNGLCGGNA-FFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 232 ~e~~-~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~-~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
-.+. .+...+++++.++|||||+|.+.+....... ..|.--.......|+++|| ++.+++.-
T Consensus 73 l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~ 136 (176)
T 2ld4_A 73 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQR 136 (176)
T ss_dssp TTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEE
T ss_pred hhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcc
Confidence 3444 5677999999999999999998644322111 1111011245567899999 88777553
No 196
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.92 E-value=8.8e-05 Score=63.15 Aligned_cols=106 Identities=19% Similarity=0.129 Sum_probs=77.1
Q ss_pred cCCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCC---CCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQL---ESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~---~~fD~i~ 227 (328)
....+||++|+|+|.......... ....++++.+++.++...+.- .....++++..++..+.+... .+||.|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 456899999999998554444332 357888999998888776541 112346888888876655433 3799999
Q ss_pred EecCccchhhHHHHHHHHhhccCCCcEEEEeccccC
Q 020270 228 FDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 228 ~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
.|.....+ ..+++++.++|+|||++.+.+.+..
T Consensus 142 ~d~~~~~~---~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 142 IDADKPNN---PHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp ECSCGGGH---HHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred ECCchHHH---HHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 98864443 4899999999999999998766544
No 197
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.91 E-value=3.1e-05 Score=67.84 Aligned_cols=102 Identities=14% Similarity=0.103 Sum_probs=78.2
Q ss_pred cCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHcCCC---CCCCeeEEecccchhccCC------CCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRTGWG---EKNNVKIIFGRWQDNLSQL------ESY 223 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~g~~---~~~~~~~~~g~w~~~~~~~------~~f 223 (328)
....+||++|+|.|........ .......+++..+.+++...+.-.. ...++.+..+++.+..... .+|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 4678899999999985444332 2456788889999998888765211 2457888888877655443 689
Q ss_pred CEEEEecCccchhhHHHHHHHHhhccCCCcEEEE
Q 020270 224 DGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 224 D~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~ 257 (328)
|.|+....-.+. ++..+++++.++|+|||++.+
T Consensus 115 D~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 115 DMITAVECAHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 999997765666 889999999999999999987
No 198
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.91 E-value=9.1e-05 Score=61.51 Aligned_cols=126 Identities=11% Similarity=0.179 Sum_probs=83.7
Q ss_pred CCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhc--cCCCCCCEEEEecC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNL--SQLESYDGIFFDTY 231 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~--~~~~~fD~i~~d~f 231 (328)
....+|++|+|+|......... .....++++-++++++...++-.. ...++.+..++..++. ....+||.|+.. |
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~-~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN-F 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE-S
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE-C
Confidence 4567999999999854433332 235788999999998887663111 1246888888876643 223579999874 4
Q ss_pred ccchhh---------HHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEE
Q 020270 232 GEYYED---------LREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLI 290 (328)
Q Consensus 232 ~e~~~~---------l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~ 290 (328)
+..|.. ...+++++.++|+|||++.+.+. . ..|...+...|.+.||.....
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td----~----~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD----N----RGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES----C----HHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC----C----HHHHHHHHHHHHHCCCccccc
Confidence 444321 24899999999999999996532 1 123444455677889875443
No 199
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.89 E-value=3e-05 Score=63.94 Aligned_cols=137 Identities=10% Similarity=-0.024 Sum_probs=84.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC-------------CCCCeeEEecccchhccCC-
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG-------------EKNNVKIIFGRWQDNLSQL- 220 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~-------------~~~~~~~~~g~w~~~~~~~- 220 (328)
..+.+||++|||+|......... ....++++..+.+++...+.... ...++++..++..+.....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 35678999999999844333222 23688899999999998775211 1346778778766654432
Q ss_pred CCCCEEEEecCccch--hhHHHHHHHHhhccCCCcE--EEEeccccC--CcchhHHhhhHHHHHHHHhcCCeEEE-EEee
Q 020270 221 ESYDGIFFDTYGEYY--EDLREFHQHLPKLLKPGGI--YSYFNGLCG--GNAFFHVVYCHLVSLELENLGFSMQL-IPLP 293 (328)
Q Consensus 221 ~~fD~i~~d~f~e~~--~~l~~~~~~~~~lL~~gG~--~~~~~~~g~--~~~~~~~~y~~~~~~~l~~~G~~~~~-~~~~ 293 (328)
++||.|+....-.+. ++...+++++.++|||||+ +.+...-.. ....+ ..-...++..+.+ ||+++. ++.+
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~-~~~~~el~~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPF-SVPQTWLHRVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCC-CCCHHHHHHTSCS-SEEEEEEEESS
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCC-CCCHHHHHHHhcC-CcEEEEecccc
Confidence 579999975442222 3455799999999999998 444332110 11111 1112344555666 998653 4444
Q ss_pred C
Q 020270 294 V 294 (328)
Q Consensus 294 ~ 294 (328)
+
T Consensus 178 ~ 178 (203)
T 1pjz_A 178 T 178 (203)
T ss_dssp C
T ss_pred c
Confidence 4
No 200
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.89 E-value=2.1e-05 Score=72.28 Aligned_cols=137 Identities=17% Similarity=0.156 Sum_probs=89.0
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
...+||++|+|.|......... .....+++..+.+++...+.+...... .+..+..........+||.|+....-+++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~~~~l~~~~~~fD~I~~~~vl~h~ 184 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREKGIRVRTD-FFEKATADDVRRTEGPANVIYAANTLCHI 184 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTTTCCEECS-CCSHHHHHHHHHHHCCEEEEEEESCGGGC
T ss_pred CCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHcCCCccee-eechhhHhhcccCCCCEEEEEECChHHhc
Confidence 4678999999999955444333 237888999999999988865321110 01111222222223579999998888899
Q ss_pred hhHHHHHHHHhhccCCCcEEEEeccc----------cCCcchhHHhhh-HHHHHHHHhcCCe-EEEEEeeC
Q 020270 236 EDLREFHQHLPKLLKPGGIYSYFNGL----------CGGNAFFHVVYC-HLVSLELENLGFS-MQLIPLPV 294 (328)
Q Consensus 236 ~~l~~~~~~~~~lL~~gG~~~~~~~~----------g~~~~~~~~~y~-~~~~~~l~~~G~~-~~~~~~~~ 294 (328)
.++..+++++.++|+|||++.+.... ......-...|. ...+..|+++||+ ++.+.++.
T Consensus 185 ~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~ 255 (416)
T 4e2x_A 185 PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRLPV 255 (416)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEECG
T ss_pred CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEccC
Confidence 99999999999999999999975221 100000000122 2677789999999 45555544
No 201
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.89 E-value=6.6e-05 Score=63.21 Aligned_cols=106 Identities=23% Similarity=0.268 Sum_probs=77.4
Q ss_pred cCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhcc-C-CCCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLS-Q-LESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~-~-~~~fD~i~~d 229 (328)
....+||++|+|.|......... .....++++.++++++...+.- .....++++..++..+..+ . ..+||.|+.|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 35678999999999854433332 2457788899998888776532 1123468888888766554 3 3679999999
Q ss_pred cCccchhhHHHHHHHHhhccCCCcEEEEeccccC
Q 020270 230 TYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 230 ~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
.....+. .+++.+.++|+|||++.+.+.+..
T Consensus 150 ~~~~~~~---~~l~~~~~~LkpgG~lv~d~~~~~ 180 (232)
T 3ntv_A 150 AAKAQSK---KFFEIYTPLLKHQGLVITDNVLYH 180 (232)
T ss_dssp TTSSSHH---HHHHHHGGGEEEEEEEEEECTTGG
T ss_pred CcHHHHH---HHHHHHHHhcCCCeEEEEeeCCcC
Confidence 8765544 899999999999999998555443
No 202
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.88 E-value=3.8e-05 Score=63.41 Aligned_cols=96 Identities=20% Similarity=0.225 Sum_probs=75.7
Q ss_pred cCCCceeeecccCCcchhHHhccCCc-eEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPV-THTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~-~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|.|...... .. ...+++..+++++...+.. .++....++..+......+||.|+....-+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 106 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLE 106 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTT
T ss_pred CCCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhh
Confidence 35678999999999855433 33 6788999999999888764 456777777665544446799999987777
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEe
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+..+...+++++.++|+|||++.+.
T Consensus 107 ~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 107 FVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp TCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 7788889999999999999999864
No 203
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.88 E-value=0.00025 Score=62.79 Aligned_cols=137 Identities=18% Similarity=0.102 Sum_probs=91.5
Q ss_pred cCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCC-----CCCCeeEEecccchhccC-CCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWG-----EKNNVKIIFGRWQDNLSQ-LESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~-----~~~~~~~~~g~w~~~~~~-~~~fD~i~ 227 (328)
....+||++|+|.|......... ......+++..+++++...++-.. ...++++..+++.+.+.. ...||.|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 34578999999999855444443 245788899999999998875321 145788888887664432 35799999
Q ss_pred EecCc-cc-hhhH--HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCC
Q 020270 228 FDTYG-EY-YEDL--REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVK 295 (328)
Q Consensus 228 ~d~f~-e~-~~~l--~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~ 295 (328)
.|.+. .. -..+ +++++.+.+.|+|||++.+.++-.-.... .. ..+...|++..-.++...+.|+
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~-~~~~~~l~~~F~~v~~~~~~vp 262 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVG---TI-KNMIGYAKKLFKKVEYANISIP 262 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHH---HH-HHHHHHHHTTCSEEEEEEEECT
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHH---HH-HHHHHHHHHHCCCeEEEEEEec
Confidence 99751 11 1111 59999999999999999986432221111 11 2233457777666877777774
No 204
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.87 E-value=1.8e-05 Score=65.19 Aligned_cols=104 Identities=16% Similarity=0.086 Sum_probs=73.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|.|......-........+++.++++++...+.-.....++....++..+......+||.|+......+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 45678999999999742211122334788899999998887664211123566677776654433467999998655556
Q ss_pred h--hhHHHHHHHHhhccCCCcEEEEe
Q 020270 235 Y--EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 235 ~--~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+ ++...+++++.++|+|||++.+.
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 6 67889999999999999999874
No 205
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.87 E-value=3.1e-05 Score=66.57 Aligned_cols=137 Identities=20% Similarity=0.106 Sum_probs=81.6
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC------------------------------CC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK------------------------------NN 205 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~------------------------------~~ 205 (328)
.+.+||++|||+|+.............+++.-.+.+++.+.+.-.... ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 456799999999974322222222357788888988887765310000 01
Q ss_pred ee-EEecccchhcc----CCCCCCEEEEecCc----cchhhHHHHHHHHhhccCCCcEEEEeccccCCc-----chhHH-
Q 020270 206 VK-IIFGRWQDNLS----QLESYDGIFFDTYG----EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN-----AFFHV- 270 (328)
Q Consensus 206 ~~-~~~g~w~~~~~----~~~~fD~i~~d~f~----e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~-----~~~~~- 270 (328)
++ +..++..+..+ ...+||.|+....- .+++++..+++++.++|||||+|.+........ ..+..
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 11 33444332111 13579999986542 335777899999999999999999764333211 00110
Q ss_pred hhhH-HHHHHHHhcCCeE-EEEEe
Q 020270 271 VYCH-LVSLELENLGFSM-QLIPL 292 (328)
Q Consensus 271 ~y~~-~~~~~l~~~G~~~-~~~~~ 292 (328)
.+.. .++..|+++||++ +.+++
T Consensus 215 ~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCHHHHHHHHHHCCCEEEEEeec
Confidence 1122 5667899999994 44444
No 206
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.87 E-value=2.9e-05 Score=67.39 Aligned_cols=132 Identities=13% Similarity=0.120 Sum_probs=88.3
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
...+..+|++|+|+|..........+...++++.++.+++.+.++-. .....+++..++..+... ...||.|+.|..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 35578899999999985433332222278889999999988876411 112347788888776655 457999999755
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEe
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPL 292 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~ 292 (328)
... .++++++.++|+|||++.++........ .+-....++..++++|+.++..+.
T Consensus 202 ~~~----~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~i~~~~~~~G~~~~~~~~ 256 (278)
T 2frn_A 202 VRT----HEFIPKALSIAKDGAIIHYHNTVPEKLM--PREPFETFKRITKEYGYDVEKLNE 256 (278)
T ss_dssp SSG----GGGHHHHHHHEEEEEEEEEEEEEEGGGT--TTTTHHHHHHHHHHTTCEEEEEEE
T ss_pred hhH----HHHHHHHHHHCCCCeEEEEEEeeccccc--cccHHHHHHHHHHHcCCeeEEeee
Confidence 322 3788899999999999998754421100 011123446678899999776444
No 207
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.86 E-value=8.5e-05 Score=66.11 Aligned_cols=137 Identities=13% Similarity=0.101 Sum_probs=94.1
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccC----CCCCCEEE
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQ----LESYDGIF 227 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~----~~~fD~i~ 227 (328)
.+.+||++|+|+|........... ..++++.++.+++.+.++ +.+ ..++.++.++..+.... -..||.|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~-~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLE-QAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCT-TSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCC-ccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 456899999999985433333333 788899999999888764 221 12478888887665532 35799999
Q ss_pred EecC--c--------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCCC
Q 020270 228 FDTY--G--------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVKN 296 (328)
Q Consensus 228 ~d~f--~--------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~~ 296 (328)
.|.- . ....+...++..+.++|+|||++.+.+...... -.+.+..+++..++.+|+.++..++..+.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~--~~~~~~~~l~~a~~~~g~~v~~~e~~~p~ 307 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRA--SFYSMHELMRETMRGAGGVVASGELVIRE 307 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTS--CHHHHHHHHHHHTTTSCSEEEEEEEEEEC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCC--CHHHHHHHHHHHHHHcCCeEEEEEEeccc
Confidence 9763 1 123456789999999999999966554333221 12345567777778899999988887754
No 208
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.86 E-value=0.00033 Score=59.76 Aligned_cols=100 Identities=11% Similarity=-0.039 Sum_probs=71.8
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC------------------CCCCeeEEecccchhc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG------------------EKNNVKIIFGRWQDNL 217 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~------------------~~~~~~~~~g~w~~~~ 217 (328)
...+||++|||.|......... -...++++..+.+++.+.+.... ...++++..++..+..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 5678999999999844333322 23688999999999998653311 2357888888877766
Q ss_pred cCC-CCCCEEEEecCcc--chhhHHHHHHHHhhccCCCcEEE
Q 020270 218 SQL-ESYDGIFFDTYGE--YYEDLREFHQHLPKLLKPGGIYS 256 (328)
Q Consensus 218 ~~~-~~fD~i~~d~f~e--~~~~l~~~~~~~~~lL~~gG~~~ 256 (328)
... ++||+|+....-. ..++...+++++.++|+|||++.
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 543 6899999654322 22445689999999999999984
No 209
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.85 E-value=6e-05 Score=66.27 Aligned_cols=101 Identities=23% Similarity=0.240 Sum_probs=76.4
Q ss_pred ceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCC-CCCCCeeEEecccchhccCC--CCCCEEEEecCcc-
Q 020270 159 HILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGW-GEKNNVKIIFGRWQDNLSQL--ESYDGIFFDTYGE- 233 (328)
Q Consensus 159 ~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~-~~~~~~~~~~g~w~~~~~~~--~~fD~i~~d~f~e- 233 (328)
+||++|+|.|........ .......++|-.+++++...+.-. ....+++++.++..+.+... .+||.|+.|.+..
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~ 171 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGA 171 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCcc
Confidence 899999999986554444 333467889999999999887532 23467899888876665433 5799999998732
Q ss_pred -----chhhHHHHHHHHhhccCCCcEEEEeccc
Q 020270 234 -----YYEDLREFHQHLPKLLKPGGIYSYFNGL 261 (328)
Q Consensus 234 -----~~~~l~~~~~~~~~lL~~gG~~~~~~~~ 261 (328)
.++ .+|++.+.++|+|||+|++..+-
T Consensus 172 ~~~~~L~t--~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 172 ITPQNFTT--VEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CCCGGGSB--HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccchhhhH--HHHHHHHHHhcCCCcEEEEEecC
Confidence 122 49999999999999999987653
No 210
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.85 E-value=0.0001 Score=61.95 Aligned_cols=125 Identities=18% Similarity=0.210 Sum_probs=83.2
Q ss_pred cCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchh---ccCCCCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDN---LSQLESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~---~~~~~~fD~i~~d 229 (328)
..+..||++|+|.|........ +..-..++++-.+++++.+.+.- ....++..+.+..... .....++|.||.|
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a-~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVV-RDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHS-TTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhh-HhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 5678899999999984433222 34456788999999999987753 3446777777664332 2233679999886
Q ss_pred cCccchhhHHHHHHHHhhccCCCcEEEEe-cccc-----CCcchhHHhhhHHHHHHHHhcCCeE
Q 020270 230 TYGEYYEDLREFHQHLPKLLKPGGIYSYF-NGLC-----GGNAFFHVVYCHLVSLELENLGFSM 287 (328)
Q Consensus 230 ~f~e~~~~l~~~~~~~~~lL~~gG~~~~~-~~~g-----~~~~~~~~~y~~~~~~~l~~~G~~~ 287 (328)
.. .++ +...++.++.+.|||||++... .... +.+. ++.. ....|+++||.+
T Consensus 155 ~~-~~~-~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~----~~~~-ev~~L~~~GF~l 211 (233)
T 4df3_A 155 VA-QPE-QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSE----VYKR-EIKTLMDGGLEI 211 (233)
T ss_dssp CC-CTT-HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCH----HHHH-HHHHHHHTTCCE
T ss_pred cc-CCh-hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHH----HHHH-HHHHHHHCCCEE
Confidence 43 333 4458999999999999999864 1111 1111 2222 234689999984
No 211
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.84 E-value=0.00026 Score=61.37 Aligned_cols=136 Identities=18% Similarity=0.229 Sum_probs=97.9
Q ss_pred cCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHc------CCCCCCCeeEEecccchhccCC-CCCCEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRT------GWGEKNNVKIIFGRWQDNLSQL-ESYDGI 226 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~------g~~~~~~~~~~~g~w~~~~~~~-~~fD~i 226 (328)
...++||-+|.|.|......-...+ .....+|-.+++++...+. ++-.+++++++.++....+... ..||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4568899999999986655555444 4566788999999877553 4445688999888866655443 679999
Q ss_pred EEecCc------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCCC
Q 020270 227 FFDTYG------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVKN 296 (328)
Q Consensus 227 ~~d~f~------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~~ 296 (328)
..|.+. ..++. +||+.+.+.|+|||++++-++.--.... .+.. +-..|+++.-.|.+..+.||.
T Consensus 162 i~D~~dp~~~~~~L~t~--eFy~~~~~~L~p~Gv~v~q~~sp~~~~~---~~~~-~~~~l~~~F~~v~~~~~~vPt 231 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTS--AFYEGCKRCLNPGGIFVAQNGVCFLQQE---EAID-SHRKLSHYFSDVGFYQAAIPT 231 (294)
T ss_dssp EESCCCCCCTTCCSSCC--HHHHHHHHTEEEEEEEEEEEEESSSCCH---HHHH-HHHHHHHHCSEEEEEEECCTT
T ss_pred EEeCCCcCCCchhhcCH--HHHHHHHHHhCCCCEEEEecCCcccChH---HHHH-HHHHHHhhCCceeeeeeeecc
Confidence 999882 35666 9999999999999999986554332222 2222 234577877778888888854
No 212
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.84 E-value=6.2e-05 Score=64.36 Aligned_cols=122 Identities=18% Similarity=0.242 Sum_probs=82.8
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
...+.++|++|+|.|..........+ ...+++..+..++...++.......+++..+++.+.++ ...||.|+.+...+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~-~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP-FGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG-GCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc-CCCCCEEEECCcHH
Confidence 45678899999999985443333344 78888888888877766421111127777777766432 24799999875433
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEE
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQ 288 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~ 288 (328)
.+..+++.+.++|+|||++.+...... ....++..|+++||.+.
T Consensus 196 ---~~~~~l~~~~~~LkpgG~lils~~~~~--------~~~~v~~~l~~~Gf~~~ 239 (254)
T 2nxc_A 196 ---LHAALAPRYREALVPGGRALLTGILKD--------RAPLVREAMAGAGFRPL 239 (254)
T ss_dssp ---HHHHHHHHHHHHEEEEEEEEEEEEEGG--------GHHHHHHHHHHTTCEEE
T ss_pred ---HHHHHHHHHHHHcCCCCEEEEEeeccC--------CHHHHHHHHHHCCCEEE
Confidence 356899999999999999996422211 13356667899999954
No 213
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.84 E-value=0.00034 Score=55.74 Aligned_cols=123 Identities=15% Similarity=0.102 Sum_probs=80.2
Q ss_pred cCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCC-CCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQL-ESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~-~~fD~i~~d~ 230 (328)
..+..+|++|+|.|......... .....++++.++++++...+.- .....++ ...++..+.++.. .+||.|+...
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC
Confidence 45668999999999854433333 2456788899999988887641 1122245 5566654444444 6799999866
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEE
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLI 290 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~ 290 (328)
...+ ..+++++.++|+|||++.+...... ........+++.|+.+...
T Consensus 103 ~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 103 GLTA----PGVFAAAWKRLPVGGRLVANAVTVE--------SEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp -TTC----TTHHHHHHHTCCTTCEEEEEECSHH--------HHHHHHHHHHHHCCEEEEE
T ss_pred cccH----HHHHHHHHHhcCCCCEEEEEeeccc--------cHHHHHHHHHHcCCeeEEE
Confidence 5433 3899999999999999985432111 1123445678888775443
No 214
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.82 E-value=0.00013 Score=59.46 Aligned_cols=107 Identities=12% Similarity=0.048 Sum_probs=73.7
Q ss_pred hhcCCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhccC-CCCCCEEE
Q 020270 153 ICSGGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLSQ-LESYDGIF 227 (328)
Q Consensus 153 ~~~~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~-~~~fD~i~ 227 (328)
....+..+|++|+|.|......... .....++++.++++++.+.+.-.. ...++.+..++..+.... ...||.|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 4456678999999999844322222 224788899999988887664211 124688888887666422 26799999
Q ss_pred EecC--c-------cchhhHHHHHHHHhhccCCCcEEEEec
Q 020270 228 FDTY--G-------EYYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 228 ~d~f--~-------e~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
++.- | ....+...+++++.++|+|||++.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 8862 2 112244579999999999999998754
No 215
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.82 E-value=9.3e-05 Score=61.01 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=75.3
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCc--
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG-- 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~-- 232 (328)
....+||++|+|.|..........+....+++.++.+++.+.+.... ..++.+..++..+......+||.|+....-
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-VPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-CTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-CCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 55678999999999854433333333788899999999998876532 356777777766653334679999975431
Q ss_pred -------------cchhhHHHHHHHHhhccCCCcEEEEec
Q 020270 233 -------------EYYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 233 -------------e~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
++..+...+++++.++|+|||++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 234566799999999999999999653
No 216
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.81 E-value=0.00033 Score=61.75 Aligned_cols=134 Identities=16% Similarity=0.080 Sum_probs=86.3
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCC-----CCCCeeEEecccchhcc-CCCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWG-----EKNNVKIIFGRWQDNLS-QLESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~-----~~~~~~~~~g~w~~~~~-~~~~fD~i~ 227 (328)
....+||++|+|.|.......... .....+++-.+++++...+.-.. ...++++..++..+.+. .-..||.|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 355789999999998655444433 35788899999999998875321 14578888888665443 235799999
Q ss_pred EecCcc------chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 228 FDTYGE------YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 228 ~d~f~e------~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
.|.+.. .++ .+|++.+.++|+|||++++.++.--.... . ...+...|++.-=.+.+..+.+
T Consensus 187 ~d~~~~~~~~~~l~t--~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~-~~~~~~~l~~vF~~v~~~~~~i 253 (314)
T 2b2c_A 187 TDSSDPVGPAESLFG--QSYYELLRDALKEDGILSSQGESVWLHLP---L-IAHLVAFNRKIFPAVTYAQSIV 253 (314)
T ss_dssp ECCC---------------HHHHHHHHEEEEEEEEEECCCTTTCHH---H-HHHHHHHHHHHCSEEEEEEEEC
T ss_pred EcCCCCCCcchhhhH--HHHHHHHHhhcCCCeEEEEECCCcccCHH---H-HHHHHHHHHHHCCcceEEEEEe
Confidence 988621 122 49999999999999999987632211111 1 1223345666533466666655
No 217
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.81 E-value=0.00023 Score=62.29 Aligned_cols=137 Identities=15% Similarity=0.022 Sum_probs=88.0
Q ss_pred cCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCC-----CCCCCeeEEecccchhccC-CCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGW-----GEKNNVKIIFGRWQDNLSQ-LESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~-----~~~~~~~~~~g~w~~~~~~-~~~fD~i~ 227 (328)
....+||++|+|.|......... ......+++.++.+++...++-. -...++++..++..+.+.. ...||.|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 34578999999999865544443 23578889999999998876421 1146788888886654432 35799999
Q ss_pred EecCccchh-----hHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCC
Q 020270 228 FDTYGEYYE-----DLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVK 295 (328)
Q Consensus 228 ~d~f~e~~~-----~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~ 295 (328)
.|.+..... ..+++++.+.++|+|||++++..+-.-.... ... .+...|++..-.++...+.++
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~~-~~~~~l~~~F~~v~~~~~~vp 237 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIG---WFK-LAYRRISKVFPITRVYLGFMT 237 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHH---HHH-HHHHHHHHHCSEEEEEEEECT
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHH---HHH-HHHHHHHHHCCceEEEEeecC
Confidence 987622010 1149999999999999999986432211111 122 233346666556777666663
No 218
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.80 E-value=0.0001 Score=64.10 Aligned_cols=139 Identities=15% Similarity=0.080 Sum_probs=83.4
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCC---------C---------------------
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKN---------N--------------------- 205 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~---------~--------------------- 205 (328)
.+.+||++|||+|..............++++-.+.+++.+.+.-..... +
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 4578999999999833211222234778888999998877652110000 0
Q ss_pred -eeEEecccchhcc------CCCCCCEEEEecCccc----hhhHHHHHHHHhhccCCCcEEEEeccccCCcc-----hh-
Q 020270 206 -VKIIFGRWQDNLS------QLESYDGIFFDTYGEY----YEDLREFHQHLPKLLKPGGIYSYFNGLCGGNA-----FF- 268 (328)
Q Consensus 206 -~~~~~g~w~~~~~------~~~~fD~i~~d~f~e~----~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~-----~~- 268 (328)
+.+..++.....+ ..++||.|+....-++ ..++..+++++.++|||||+|.+...+..... .+
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 1222223332111 1135999998765444 56788999999999999999998643322100 00
Q ss_pred HHhhh-HHHHHHHHhcCCe-EEEEEeeC
Q 020270 269 HVVYC-HLVSLELENLGFS-MQLIPLPV 294 (328)
Q Consensus 269 ~~~y~-~~~~~~l~~~G~~-~~~~~~~~ 294 (328)
.-.+. ...+..|+++||+ ++++.++.
T Consensus 231 ~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 258 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYKVRDLRTYIM 258 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred eccCCHHHHHHHHHHcCCeEEEeeEeec
Confidence 00122 2566689999998 56666664
No 219
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.79 E-value=3e-05 Score=66.11 Aligned_cols=105 Identities=26% Similarity=0.280 Sum_probs=74.0
Q ss_pred cCCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccC-------CCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQ-------LESY 223 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~-------~~~f 223 (328)
....+||++|+|.|.......... ....++++.++++++...+.- .....++++..++..+.+.. ..+|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 355789999999998443332221 357788888888877765531 11234678888887655432 3579
Q ss_pred CEEEEecCccchhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 224 DGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 224 D~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
|.|+.|.....+ ..+++.+.++|+|||++.+-+.+.
T Consensus 158 D~V~~d~~~~~~---~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 158 DFIFVDADKDNY---LNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp SEEEECSCSTTH---HHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEEEcCchHHH---HHHHHHHHHhCCCCeEEEEecCCc
Confidence 999999875544 489999999999999999866554
No 220
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.78 E-value=5.1e-05 Score=63.34 Aligned_cols=105 Identities=19% Similarity=0.171 Sum_probs=74.8
Q ss_pred cCCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCC------CCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQL------ESYD 224 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~------~~fD 224 (328)
.....||++|+|.|.......... ....++++.++++++.+.+.- ......+++..++..+..... .+||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 345789999999998554443332 457888999998887776531 112345888888875554332 5799
Q ss_pred EEEEecCccchhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 225 GIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 225 ~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.|+.|...+. ...+++++.++|+|||++.+.+...
T Consensus 143 ~v~~~~~~~~---~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 143 LIYIDADKAN---TDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEEECSCGGG---HHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred EEEECCCHHH---HHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 9999886443 4489999999999999998765553
No 221
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.76 E-value=0.00038 Score=60.45 Aligned_cols=137 Identities=18% Similarity=0.110 Sum_probs=89.6
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCC-----CCCCeeEEecccchhccC-CCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWG-----EKNNVKIIFGRWQDNLSQ-LESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~-----~~~~~~~~~g~w~~~~~~-~~~fD~i~ 227 (328)
....+||++|+|.|.......... .....+++..+++++...+.-.. ..+++++..++..+.+.. ...||.|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 345789999999998655444433 35788899999999988875321 146788888886654432 35799999
Q ss_pred EecCccc--hhhH--HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCC
Q 020270 228 FDTYGEY--YEDL--REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVK 295 (328)
Q Consensus 228 ~d~f~e~--~~~l--~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~ 295 (328)
.|.+... -..+ .+|++.+.++|+|||++++..+---.... .+ ..+...|++.--.++...+.|+
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~---~~-~~~~~~l~~~F~~v~~~~~~vP 224 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVG---TI-KNMIGYAKKLFKKVEYANISIP 224 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHH---HH-HHHHHHHHTTCSEEEEEEEECT
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHH---HH-HHHHHHHHHHCCceEEEEEEcC
Confidence 9986211 0112 49999999999999999976432111111 11 2233456666444776666664
No 222
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.76 E-value=8.3e-05 Score=61.58 Aligned_cols=102 Identities=19% Similarity=0.213 Sum_probs=76.3
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|.|.......... ....+++..+.+++...+.... ..++++..++..+.. ...+||.|+....-++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKR-WSHISWAATDILQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTT-CSSEEEEECCTTTCC-CSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhccc-CCCeEEEEcchhhCC-CCCCccEEEEccHHHh
Confidence 345689999999998544333322 4778899999999999886533 347888888877665 3467999999766555
Q ss_pred hhh---HHHHHHHHhhccCCCcEEEEec
Q 020270 235 YED---LREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 235 ~~~---l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
..+ +..+++++.++|+|||++.+.+
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 543 3678999999999999999743
No 223
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.75 E-value=0.00024 Score=56.76 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=86.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
.....+|++|+|.|........ ......+++.++++++.+.++-... -.++++..+++.+.... ..||.|+.+..
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~-~~~D~i~~~~~-- 109 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK-LEFNKAFIGGT-- 109 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG-CCCSEEEECSC--
T ss_pred CCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC-CCCcEEEECCc--
Confidence 4567899999999985443333 4567888999999888876642111 13588888887764333 57999999766
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
.++..+++.+.++ |||++.+...... . .......|++.||.++...+.+
T Consensus 110 --~~~~~~l~~~~~~--~gG~l~~~~~~~~-------~-~~~~~~~l~~~g~~~~~~~~~~ 158 (183)
T 2yxd_A 110 --KNIEKIIEILDKK--KINHIVANTIVLE-------N-AAKIINEFESRGYNVDAVNVFI 158 (183)
T ss_dssp --SCHHHHHHHHHHT--TCCEEEEEESCHH-------H-HHHHHHHHHHTTCEEEEEEEEE
T ss_pred --ccHHHHHHHHhhC--CCCEEEEEecccc-------c-HHHHHHHHHHcCCeEEEEEeee
Confidence 4455889998888 9999986542110 0 1234557899999999887776
No 224
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.75 E-value=3.5e-05 Score=65.23 Aligned_cols=106 Identities=26% Similarity=0.259 Sum_probs=75.6
Q ss_pred cCCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccC-------CCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQ-------LESY 223 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~-------~~~f 223 (328)
....+||++|+|.|.......... .....+++.+++.++...++- ......+++..+++.+.+.. ...|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 356789999999998544333221 357888899998888776531 11234578888887665432 3579
Q ss_pred CEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccC
Q 020270 224 DGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 224 D~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
|.|+.|.....+ ..+++.+.++|+|||++.+-+.+..
T Consensus 149 D~I~~d~~~~~~---~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 149 DFGFVDADKPNY---IKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp EEEEECSCGGGH---HHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred CEEEECCchHHH---HHHHHHHHHhcCCCeEEEEecCCcC
Confidence 999999865554 4899999999999999998765543
No 225
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.74 E-value=9e-05 Score=60.13 Aligned_cols=104 Identities=12% Similarity=0.043 Sum_probs=74.8
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccC--CCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQ--LESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~--~~~fD~i~~d~f 231 (328)
..+..+|++|+|+|..............++++.++++++.+.++-... ..++++..+++.+.... ..+||.|+.|.-
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 356789999999998544223333446788999999998876642111 14688888987776542 367999999864
Q ss_pred ccc-hhhHHHHHHHHhh--ccCCCcEEEEe
Q 020270 232 GEY-YEDLREFHQHLPK--LLKPGGIYSYF 258 (328)
Q Consensus 232 ~e~-~~~l~~~~~~~~~--lL~~gG~~~~~ 258 (328)
-.. ..++.++++.+.+ +|+|||++.+-
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 222 2667799999998 99999999953
No 226
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.74 E-value=7e-05 Score=63.16 Aligned_cols=100 Identities=13% Similarity=0.176 Sum_probs=73.6
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEec-Cccc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDT-YGEY 234 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~-f~e~ 234 (328)
...+||++|+|.|......... .....+++..+.+++...+.......++.+..++..+.... ..||.|+... .-++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccc
Confidence 4578999999999854433333 34688889999998887764322222677777777665444 6799999865 4345
Q ss_pred h---hhHHHHHHHHhhccCCCcEEEE
Q 020270 235 Y---EDLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 235 ~---~~l~~~~~~~~~lL~~gG~~~~ 257 (328)
. +++..+++++.++|+|||++.+
T Consensus 115 ~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5 6788999999999999999986
No 227
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.74 E-value=0.00034 Score=62.11 Aligned_cols=128 Identities=15% Similarity=0.202 Sum_probs=84.4
Q ss_pred CCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 157 GGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
..+|+++|+|+|......... ......+.+- +.+++...+.- .....++++..++..+..+. .||.|+.-..-.
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~--~~D~v~~~~vlh 246 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA--GAGGYVLSAVLH 246 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC--SCSEEEEESCGG
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC--CCcEEEEehhhc
Confidence 468999999999854433332 3345556666 88887776531 11235688888876533332 699999977766
Q ss_pred chhh--HHHHHHHHhhccCCCcEEEEeccccCCc--chhHHhhh-----------HHHHHHHHhcCCeE
Q 020270 234 YYED--LREFHQHLPKLLKPGGIYSYFNGLCGGN--AFFHVVYC-----------HLVSLELENLGFSM 287 (328)
Q Consensus 234 ~~~~--l~~~~~~~~~lL~~gG~~~~~~~~g~~~--~~~~~~y~-----------~~~~~~l~~~G~~~ 287 (328)
+|.+ ...+++++.++|+|||++.+.....+.. ...+|.+. ...+..|+++||++
T Consensus 247 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 247 DWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEE
Confidence 7765 4789999999999999998865433321 12333221 14555889999984
No 228
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.74 E-value=7.1e-05 Score=60.97 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=74.8
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
...+||++|+|.|......... .....+++..+.+++.+.+.-... ..++.+..+++.+... ..+||.|+....-.+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 4568999999999844333332 347888899998888876532111 1257788787766544 467999998766555
Q ss_pred hh--hHHHHHHHHhhccCCCcEEEEecccc
Q 020270 235 YE--DLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 235 ~~--~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.. +...+++++.++|+|||++.+.....
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 44 67899999999999999987654433
No 229
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.74 E-value=0.0004 Score=55.33 Aligned_cols=114 Identities=15% Similarity=0.142 Sum_probs=76.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|+|.......... ...+++.++.+++. ..++++..+++.+.... .+||.|+.+.- -+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~--------~~~~~~~~~d~~~~~~~-~~fD~i~~n~~-~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES--------HRGGNLVRADLLCSINQ-ESVDVVVFNPP-YV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT--------CSSSCEEECSTTTTBCG-GGCSEEEECCC-CB
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc--------ccCCeEEECChhhhccc-CCCCEEEECCC-Cc
Confidence 345689999999998554444333 78889999999987 34577777877653332 67999998643 22
Q ss_pred h----------hhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEE
Q 020270 235 Y----------EDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQL 289 (328)
Q Consensus 235 ~----------~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~ 289 (328)
+ .+..++++++.+.+ |||++.+....... ....+..|+++||++.-
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~--------~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR--------PKEVLARLEERGYGTRI 145 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC--------HHHHHHHHHHTTCEEEE
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC--------HHHHHHHHHHCCCcEEE
Confidence 1 11236777777777 99999875421111 22445578999999443
No 230
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.74 E-value=8.9e-05 Score=62.46 Aligned_cols=100 Identities=19% Similarity=0.238 Sum_probs=73.0
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEec-Ccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDT-YGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~-f~e 233 (328)
....+||++|+|.|......... ....+++..+.+++...+.......++.+..++..+.... .+||.|+... ..+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLN 108 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchh
Confidence 44578999999999855444333 5788889999999888765322224577777776665433 6799999854 223
Q ss_pred ch---hhHHHHHHHHhhccCCCcEEEE
Q 020270 234 YY---EDLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 234 ~~---~~l~~~~~~~~~lL~~gG~~~~ 257 (328)
+. .++..+++++.++|+|||++.+
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 33 6677999999999999999986
No 231
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.73 E-value=0.00011 Score=62.98 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=84.5
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccC--CCCCCEEEEecC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQ--LESYDGIFFDTY 231 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~--~~~fD~i~~d~f 231 (328)
...+||++|+|+|..........+....+++-++.+++.+.++-. ....++++..+++.+.... ..+||.|+.+.-
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 567899999999995544444444488899999999888766411 1123588888888776643 367999999632
Q ss_pred c--------------------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEE
Q 020270 232 G--------------------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQL 289 (328)
Q Consensus 232 ~--------------------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~ 289 (328)
- +....+..+++.+.++|+|||++.+... ... . ......|++.||.+..
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~------~-~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR--PER------L-LDIIDIMRKYRLEPKR 197 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC--TTT------H-HHHHHHHHHTTEEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc--HHH------H-HHHHHHHHHCCCceEE
Confidence 1 0113456899999999999999998432 111 1 1233457888998543
No 232
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.72 E-value=0.00012 Score=60.72 Aligned_cols=101 Identities=17% Similarity=0.192 Sum_probs=66.1
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchh---ccCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDN---LSQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~---~~~~~~fD~i~~d~ 230 (328)
..+.+||++|+|+|.......... ....++++-.+.+++.+++.. ....++....++.... .+..++||.|+.+.
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a-~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 134 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELV-RERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI 134 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHH-HHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH-hcCCCeEEEEcCCCCchhhcccccceeEEEEec
Confidence 356689999999998443222211 346788999998776655422 1123566666654432 11126799999985
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEe
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
. .. .+...+++++.++|||||++.+.
T Consensus 135 ~-~~-~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 A-QK-NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp C-ST-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-Ch-hHHHHHHHHHHHHhCCCCEEEEE
Confidence 3 32 23345689999999999999976
No 233
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.71 E-value=1.3e-05 Score=68.15 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=71.6
Q ss_pred cCCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHH----HHHcCCCCCCCeeEEecccchhccCC------CC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYER----MLRTGWGEKNNVKIIFGRWQDNLSQL------ES 222 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~----L~~~g~~~~~~~~~~~g~w~~~~~~~------~~ 222 (328)
....+||++|+|+|.......... ....++++.++++++. +...| ...++++..++..+.+..+ ++
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK--QEHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT--CTTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 355789999999998544333322 3467777766654433 23333 2356888888876655443 67
Q ss_pred CCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 223 YDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 223 fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
||.|+.|.....+ ..+++++.++|+|||++.+.+.+.
T Consensus 137 fD~V~~d~~~~~~---~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 137 FDFIFIDADKTNY---LNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp EEEEEEESCGGGH---HHHHHHHHHHEEEEEEEEEECSSS
T ss_pred EeEEEEcCChHHh---HHHHHHHHHhcCCCeEEEEECCcc
Confidence 9999999875444 478999999999999999866554
No 234
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.70 E-value=4.4e-05 Score=69.27 Aligned_cols=102 Identities=14% Similarity=0.212 Sum_probs=74.4
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc--
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE-- 233 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e-- 233 (328)
.+.+||++|+|.|......... .....+++.++.+++...++-......+++..+++.+......+||.|+.+.--.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 4568999999999954433333 3478889999998888766422222347777787776655556899999974322
Q ss_pred ---chhhHHHHHHHHhhccCCCcEEEEe
Q 020270 234 ---YYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 234 ---~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
...+...+++++.++|+|||++.+.
T Consensus 312 ~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 312 GAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 2466779999999999999999975
No 235
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.69 E-value=0.0002 Score=63.21 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=89.2
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCC------CCCCCeeEEecccchhcc-CCCCCCEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGW------GEKNNVKIIFGRWQDNLS-QLESYDGI 226 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~------~~~~~~~~~~g~w~~~~~-~~~~fD~i 226 (328)
....+||++|+|.|.......... .....+++..+++++...+.-. -..+++++..++..+.+. ...+||.|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 355789999999998655444432 3577889999999998876421 124678888888665433 23579999
Q ss_pred EEecCccc---h--hh--HHHHHHHHhhccCCCcEEEEeccccC-CcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 227 FFDTYGEY---Y--ED--LREFHQHLPKLLKPGGIYSYFNGLCG-GNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 227 ~~d~f~e~---~--~~--l~~~~~~~~~lL~~gG~~~~~~~~g~-~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
+.|.+... - .. ..+|++.+.++|+|||++.+..+-.. .+. +.+ ..+...|++..-.++...+.+
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~~-~~~~~~l~~~F~~v~~~~~~v 227 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHH---RVH-PVVHRTVREAFRYVRSYKNHI 227 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC------CHH-HHHHHHHHTTCSEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCH---HHH-HHHHHHHHHHCCceEEEEEec
Confidence 99976422 0 11 25999999999999999998643221 111 122 233345777765676665555
No 236
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.67 E-value=0.00029 Score=62.86 Aligned_cols=134 Identities=18% Similarity=0.137 Sum_probs=91.2
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC------CC---CCeeEEecccchhccC----CCC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG------EK---NNVKIIFGRWQDNLSQ----LES 222 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~------~~---~~~~~~~g~w~~~~~~----~~~ 222 (328)
..+++|.+|.|.|..........+....++|-.+.+++...+.-.. .. .+++++.++....+.. -..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 4578999999999865544444456778899999999998875211 11 2688888886665543 357
Q ss_pred CCEEEEecCc--c------chhhHHHHHHHH----hhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEE-
Q 020270 223 YDGIFFDTYG--E------YYEDLREFHQHL----PKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQL- 289 (328)
Q Consensus 223 fD~i~~d~f~--e------~~~~l~~~~~~~----~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~- 289 (328)
||.|+.|.+. . .++. +|++.+ .++|+|||++++.++-.... -...+.+..|++.=-.|.|
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~--eFy~~~~~~~~~~L~pgGilv~qs~s~~~~-----e~~~~~~~~l~~~F~~v~~~ 340 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTW--EFLRLILDLSMKVLKQDGKYFTQGNCVNLT-----EALSLYEEQLGRLYCPVEFS 340 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHH--HHHHHHHHHHHHTEEEEEEEEEEEEETTCH-----HHHHHHHHHHTTSSSCEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHH--HHHHHHHHHHHhhCCCCcEEEEEcCCcchH-----HHHHHHHHHHHHhCCceEEe
Confidence 9999999863 1 2433 888887 89999999999875543321 1122444456654445888
Q ss_pred -EEeeCCC
Q 020270 290 -IPLPVKN 296 (328)
Q Consensus 290 -~~~~~~~ 296 (328)
..+.||.
T Consensus 341 ~~~~~vPs 348 (364)
T 2qfm_A 341 KEIVCVPS 348 (364)
T ss_dssp EEEECCGG
T ss_pred eEeeecCC
Confidence 6788844
No 237
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.67 E-value=0.00024 Score=58.91 Aligned_cols=136 Identities=10% Similarity=0.046 Sum_probs=81.5
Q ss_pred hcCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHc---CC--CCCCCeeEEecccchhccCCCCCCEEE
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRT---GW--GEKNNVKIIFGRWQDNLSQLESYDGIF 227 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~---g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~ 227 (328)
...+.+||++|||.|.......... ....++++..+++++.+.+. .. ....++.+..++..+....... |.++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 3566789999999998544333333 46788888888877754311 10 1123688888887765443333 6655
Q ss_pred EecCcc------chhhHHHHHHHHhhccCCCcEEEEeccccCCc---------chhHHhh-hHHHHHHHHhcCCeEEEEE
Q 020270 228 FDTYGE------YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN---------AFFHVVY-CHLVSLELENLGFSMQLIP 291 (328)
Q Consensus 228 ~d~f~e------~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~---------~~~~~~y-~~~~~~~l~~~G~~~~~~~ 291 (328)
. .++- +..+...+++++.++|||||++.+..+...-. ......| ....+..|+++||+++..+
T Consensus 104 ~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 104 V-LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp E-ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred E-EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 3 2221 12222589999999999999999743221110 0011112 2245568899999966544
No 238
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.66 E-value=0.00012 Score=61.50 Aligned_cols=131 Identities=13% Similarity=0.111 Sum_probs=81.3
Q ss_pred cCCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhc---cCCCCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNL---SQLESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~---~~~~~fD~i~~d 229 (328)
..+.++|++|+|+|......... .....++++-.+.+++.+++... ...++.+..++..+.. ....+||.|+.|
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~-~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAK-KRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH-HCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhh-ccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 34678999999999844333222 22467888988877666654321 1256888888765532 123579999997
Q ss_pred cCccchhhHHHHHHHHhhccCCCcEEEEecccc--CCcchhHHhhhHHHHHHHHhcCCeEEE
Q 020270 230 TYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLC--GGNAFFHVVYCHLVSLELENLGFSMQL 289 (328)
Q Consensus 230 ~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g--~~~~~~~~~y~~~~~~~l~~~G~~~~~ 289 (328)
.. .....+.++.++.++|+|||++.+..... ........++... ...|+++||.+.-
T Consensus 155 ~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 155 VA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQE 213 (233)
T ss_dssp CC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEE
T ss_pred CC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEE
Confidence 65 22233467889999999999998743221 1111112223333 3567889999543
No 239
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.66 E-value=0.00058 Score=60.73 Aligned_cols=104 Identities=21% Similarity=0.213 Sum_probs=75.6
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCC-----CCCCeeEEecccchhccCC--CCCCEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWG-----EKNNVKIIFGRWQDNLSQL--ESYDGI 226 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~-----~~~~~~~~~g~w~~~~~~~--~~fD~i 226 (328)
....+||++|+|.|.......... .....+++..+.+++...++-.. ...++++..+++.+.+... .+||.|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 355789999999998655444443 35788899999999988764211 2357888889877665432 579999
Q ss_pred EEecC-ccchhh---HHHHHHHHhhccCCCcEEEEe
Q 020270 227 FFDTY-GEYYED---LREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 227 ~~d~f-~e~~~~---l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+.|.+ |..... .++|++.+.++|+|||++.+-
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99876 221111 259999999999999999975
No 240
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.62 E-value=7.2e-05 Score=63.01 Aligned_cols=103 Identities=22% Similarity=0.272 Sum_probs=74.1
Q ss_pred CCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCC------CCC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQL------ESY 223 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~------~~f 223 (328)
...+||++|+|.|.......... ....++++.+++.++...+. |. ...+.+..++..+.+..+ .+|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 45789999999998544433332 24788889999888776553 32 235777888765543322 579
Q ss_pred CEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccC
Q 020270 224 DGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 224 D~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
|.|+.|.....+ ..+++++.++|+|||++.+-+....
T Consensus 150 D~V~~d~~~~~~---~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 150 DLIFIDADKRNY---PRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEEECSCGGGH---HHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred CEEEECCCHHHH---HHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 999998865444 4899999999999999998766544
No 241
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.62 E-value=0.00048 Score=62.03 Aligned_cols=108 Identities=16% Similarity=0.212 Sum_probs=74.1
Q ss_pred cCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhc-cCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNL-SQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~-~~~~~fD~i~~d~ 230 (328)
....+||++|+|+|......... .....++.+- +.+++...+.-.. ...++++..++..+.. +...+||.|+...
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 46689999999999854433332 3345555666 8888887764221 1246888888865531 1115799999977
Q ss_pred Cccchhh--HHHHHHHHhhccCCCcEEEEeccccC
Q 020270 231 YGEYYED--LREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 231 f~e~~~~--l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
.-.+|.+ ...+++++.+.|+|||++.+......
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 7666743 45889999999999999988654433
No 242
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.61 E-value=0.00011 Score=60.51 Aligned_cols=103 Identities=18% Similarity=0.122 Sum_probs=72.5
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC---CCeeEEecccchhccC--CCC-CCEEEEe
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK---NNVKIIFGRWQDNLSQ--LES-YDGIFFD 229 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~---~~~~~~~g~w~~~~~~--~~~-fD~i~~d 229 (328)
.+..||++|+|+|...............+++.++++++.+.++-.... .++++..++..+.... ..+ ||.|+.|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 457899999999985433222234578889999999998876421111 4688888887766544 357 9999997
Q ss_pred cCccchhhHHHHHHHH--hhccCCCcEEEEec
Q 020270 230 TYGEYYEDLREFHQHL--PKLLKPGGIYSYFN 259 (328)
Q Consensus 230 ~f~e~~~~l~~~~~~~--~~lL~~gG~~~~~~ 259 (328)
.- -...+..++++.+ .++|+|||++.+.+
T Consensus 133 ~~-~~~~~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 133 PP-FHFNLAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp CC-SSSCHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CC-CCCccHHHHHHHHHhcCccCCCcEEEEEE
Confidence 64 2244556788888 67899999998643
No 243
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.61 E-value=7.3e-05 Score=65.07 Aligned_cols=103 Identities=16% Similarity=0.263 Sum_probs=73.9
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC-----CCCCeeEEecccchhc---cCCCCCCEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG-----EKNNVKIIFGRWQDNL---SQLESYDGI 226 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~-----~~~~~~~~~g~w~~~~---~~~~~fD~i 226 (328)
....+||++|+|+|........... ..++++..+.+++...+.... ...++.+..+.+.... ....+||.|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 3567899999999985443333333 788899999999988664211 1135667777776655 344689999
Q ss_pred EEe-cCccchhh-------HHHHHHHHhhccCCCcEEEEe
Q 020270 227 FFD-TYGEYYED-------LREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 227 ~~d-~f~e~~~~-------l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+.. ..-+++.+ ...+++++.++|+|||++.+.
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 985 33345555 889999999999999999864
No 244
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.60 E-value=0.00027 Score=61.46 Aligned_cols=105 Identities=13% Similarity=0.053 Sum_probs=75.0
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhcc-CCCCCCEEEEec
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLS-QLESYDGIFFDT 230 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~-~~~~fD~i~~d~ 230 (328)
.....+||++|+|.|...............+++..+.+++...+.-.. ...++.+..++..+... ...+||.|+...
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 356678999999999744333333334788899999998887764211 12357777777665543 346799999875
Q ss_pred Cc----cchhhHHHHHHHHhhccCCCcEEEEe
Q 020270 231 YG----EYYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 231 f~----e~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
.. ++..+...+++++.++|+|||++.+.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 54 34577789999999999999999864
No 245
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.60 E-value=0.00034 Score=62.60 Aligned_cols=126 Identities=12% Similarity=0.143 Sum_probs=79.8
Q ss_pred cCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCCC---CCCCeeEEecccchhccCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGWG---EKNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~~---~~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
....+||++|+|+|..........| ...+..+. +.++. +.... ...++++..++..+..+ +||.|+...
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~---~~~~~~~~~~~~v~~~~~d~~~~~p---~~D~v~~~~ 255 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA---RHRLDAPDVAGRWKVVEGDFLREVP---HADVHVLKR 255 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT---TCCCCCGGGTTSEEEEECCTTTCCC---CCSEEEEES
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh---cccccccCCCCCeEEEecCCCCCCC---CCcEEEEeh
Confidence 4567899999999985544433333 33344444 55554 22111 13468888888653333 799999977
Q ss_pred CccchhhH--HHHHHHHhhccCCCcEEEEeccccCCc-----chhHHhh----------h-HHHHHHHHhcCCeE
Q 020270 231 YGEYYEDL--REFHQHLPKLLKPGGIYSYFNGLCGGN-----AFFHVVY----------C-HLVSLELENLGFSM 287 (328)
Q Consensus 231 f~e~~~~l--~~~~~~~~~lL~~gG~~~~~~~~g~~~-----~~~~~~y----------~-~~~~~~l~~~G~~~ 287 (328)
.-.+|.+. ..+++++.++|+|||++.+.....+.. ...++.. + ...+..|+++||++
T Consensus 256 vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 330 (348)
T 3lst_A 256 ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRL 330 (348)
T ss_dssp CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCce
Confidence 76778765 699999999999999999864433321 1122221 1 14455889999983
No 246
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.60 E-value=0.00017 Score=62.60 Aligned_cols=106 Identities=14% Similarity=0.108 Sum_probs=76.4
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
...+||++|+|.|......... .....+++.++.+++.+.+.-.....++++..++..+... ...||.|+....-.+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 5678999999999854433333 3378889999998887766432222367888888766544 4679999997654433
Q ss_pred --hhHHHHHHHHhhccCCCcEEEEeccccC
Q 020270 236 --EDLREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 236 --~~l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
+++..+++++.++|+|||++.+......
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 227 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAMST 227 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEBCC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 4567999999999999999777655443
No 247
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.59 E-value=0.0001 Score=60.82 Aligned_cols=103 Identities=14% Similarity=0.085 Sum_probs=73.3
Q ss_pred CCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCC-CCCCEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQL-ESYDGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~-~~fD~i~~d~ 230 (328)
...+||++|+|.|.......... .....+++.++++++...++- ......+++..+++.+.++.. . ||.|+.|.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 45789999999998544333332 357788899998888776531 111235788888876654433 4 99999996
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.... ...+++++.++|+|||++.+.+...
T Consensus 135 ~~~~---~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 135 DVFN---GADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp TTSC---HHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred Chhh---hHHHHHHHHHhcCCCeEEEEECccc
Confidence 5444 3489999999999999999865544
No 248
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.58 E-value=0.00024 Score=59.98 Aligned_cols=102 Identities=25% Similarity=0.280 Sum_probs=71.6
Q ss_pred cCCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCC--------
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQL-------- 220 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~-------- 220 (328)
....+||++|+|.|.......... ....++++.+++.++...+. |. ...+.+..++..+....+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHHHHHHHhhccccc
Confidence 356789999999998444333322 35788899999888776654 32 234777777754433211
Q ss_pred ---------CCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccc
Q 020270 221 ---------ESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGL 261 (328)
Q Consensus 221 ---------~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~ 261 (328)
..||.|+.+...+. ...+++.+.++|+|||++.+.+.+
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~~---~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKEN---YPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGGG---HHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccccccCCCCCcCEEEEeCCHHH---HHHHHHHHHHHcCCCeEEEEEccc
Confidence 57999999865444 348899999999999999987644
No 249
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.58 E-value=0.00018 Score=59.44 Aligned_cols=112 Identities=15% Similarity=0.134 Sum_probs=73.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
.....||++|+|.|...... .....+++..+. ++.+..++..+......+||.|+....- +
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~--------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~ 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI----RNPVHCFDLASL--------------DPRVTVCDMAQVPLEDESVDVAVFCLSL-M 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS--------------STTEEESCTTSCSCCTTCEEEEEEESCC-C
T ss_pred CCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC--------------CceEEEeccccCCCCCCCEeEEEEehhc-c
Confidence 34578999999999854333 134555553333 3455566655543334579999885543 5
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEE
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIP 291 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~ 291 (328)
+.+...+++++.++|+|||++.+....... .-.......|+++||++....
T Consensus 127 ~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~------~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 127 GTNIRDFLEEANRVLKPGGLLKVAEVSSRF------EDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEECGGGC------SCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCHHHHHHHHHHhCCCCeEEEEEEcCCCC------CCHHHHHHHHHHCCCEEEEEe
Confidence 678889999999999999999875322111 012355567899999976543
No 250
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.58 E-value=0.0013 Score=59.42 Aligned_cols=130 Identities=19% Similarity=0.261 Sum_probs=85.8
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
....+|+++|+|.|.......... .....+.+- +.+++...+.- .....++++..++..+..+. .||.|+....
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~--~~D~v~~~~v 277 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD--GADVYLIKHV 277 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS--SCSEEEEESC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC--CceEEEhhhh
Confidence 356789999999998544333333 345566667 88887766531 11235688888886643333 6999999777
Q ss_pred ccchhhHH--HHHHHHhhccCCCcEEEEeccccCCcc----hhHHhh----------h-HHHHHHHHhcCCeE
Q 020270 232 GEYYEDLR--EFHQHLPKLLKPGGIYSYFNGLCGGNA----FFHVVY----------C-HLVSLELENLGFSM 287 (328)
Q Consensus 232 ~e~~~~l~--~~~~~~~~lL~~gG~~~~~~~~g~~~~----~~~~~y----------~-~~~~~~l~~~G~~~ 287 (328)
-.+|.+.. .+++++.++|+|||++.+.....+... ...|.+ + ...+..|+++||++
T Consensus 278 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 278 LHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 67776543 799999999999999998654443321 122221 1 13455789999993
No 251
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.58 E-value=0.00021 Score=59.75 Aligned_cols=105 Identities=17% Similarity=0.162 Sum_probs=74.0
Q ss_pred cCCCceeeecccCCcchhHHhccC--CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCC------CCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS--PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQL------ESYD 224 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~--~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~------~~fD 224 (328)
....+||++|+|+|.......... ....++++.+++.++...+.- .....++++..++..+.+..+ ..||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 456789999999998544333322 357788888888877765531 112346788888765543322 5799
Q ss_pred EEEEecCccchhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 225 GIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 225 ~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.|+.|.....+ ..+++.+.++|+|||++.+.+.+.
T Consensus 148 ~v~~d~~~~~~---~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 148 VAVVDADKENC---SAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EEEECSCSTTH---HHHHHHHHHHEEEEEEEEEECCSG
T ss_pred EEEECCCHHHH---HHHHHHHHHHcCCCeEEEEECCCc
Confidence 99998865544 388999999999999999866554
No 252
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.57 E-value=0.00044 Score=60.67 Aligned_cols=105 Identities=17% Similarity=0.136 Sum_probs=73.8
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCC-----CCCCeeEEecccchhccC-CCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWG-----EKNNVKIIFGRWQDNLSQ-LESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~-----~~~~~~~~~g~w~~~~~~-~~~fD~i~ 227 (328)
....+||++|+|.|.......... .....+++..+++++...++-.. ...+++++.++..+.+.. ...||.|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 356789999999998655444433 35788899999999988764211 246788888886554432 35799999
Q ss_pred EecCccchh----hHHHHHHHHhhccCCCcEEEEec
Q 020270 228 FDTYGEYYE----DLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 228 ~d~f~e~~~----~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
.|.+..... ..++|++.+.++|+|||++++.+
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 998631100 11389999999999999999765
No 253
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.57 E-value=0.0002 Score=57.87 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=73.5
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CC--CeeEEecccchhccCCCCCCEEEEecCc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KN--NVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~--~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
....||++|+|.|......... .....+++.++.+++.+.+.-... .. .+.+..+++.+... ...||.|+.+.--
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~ 129 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-DRKYNKIITNPPI 129 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-TSCEEEEEECCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc-cCCceEEEECCCc
Confidence 5678999999999854433333 567888999999888877642111 12 37888887765433 3579999987532
Q ss_pred cc-hhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 233 EY-YEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 233 e~-~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
.+ ...+..+++++.++|+|||++.+...
T Consensus 130 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 130 RAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp TTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 22 35677999999999999999997644
No 254
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.54 E-value=0.00034 Score=59.77 Aligned_cols=98 Identities=15% Similarity=0.203 Sum_probs=71.9
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
....+||++|+|.|......... .....+++..+.+++...+.... . ...++..+......+||.|+......+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~---~--~~~~d~~~~~~~~~~fD~v~~~~~~~~ 126 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGVK---N--VVEAKAEDLPFPSGAFEAVLALGDVLS 126 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTCS---C--EEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcCC---C--EEECcHHHCCCCCCCEEEEEEcchhhh
Confidence 36678999999999854433333 34788899999999998886531 1 455565554433467999998654455
Q ss_pred h-hhHHHHHHHHhhccCCCcEEEEe
Q 020270 235 Y-EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 235 ~-~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+ .+...+++++.++|+|||++.+.
T Consensus 127 ~~~~~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 127 YVENKDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp HCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccHHHHHHHHHHHcCCCeEEEEE
Confidence 5 56779999999999999999863
No 255
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.54 E-value=9e-05 Score=61.83 Aligned_cols=122 Identities=16% Similarity=0.213 Sum_probs=79.5
Q ss_pred CCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhcc---CCCCCCEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLS---QLESYDGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~---~~~~fD~i~~d~ 230 (328)
....||++|||.|......... .....++++.++.+++.+.++-.. ...++++..++..+.+. ...+||.|+..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~- 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF- 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE-
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe-
Confidence 4578999999999854433333 335788999999988887654211 12368888888666532 33679999874
Q ss_pred CccchhhH---------HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHh-cCCe
Q 020270 231 YGEYYEDL---------REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELEN-LGFS 286 (328)
Q Consensus 231 f~e~~~~l---------~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~-~G~~ 286 (328)
||..|... .++++++.++|+|||++.+.+. ...|..-+...|.+ .||.
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td--------~~~~~~~~~~~~~~~~~~~ 170 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD--------WEPYAEHMLEVMSSIDGYK 170 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES--------CHHHHHHHHHHHHTSTTEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC--------CHHHHHHHHHHHHhCCCcc
Confidence 33433221 1599999999999999986442 12455544444444 4565
No 256
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.53 E-value=0.0016 Score=58.82 Aligned_cols=124 Identities=16% Similarity=0.175 Sum_probs=81.3
Q ss_pred CCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccC--CCCCCEEEE
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQ--LESYDGIFF 228 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~--~~~fD~i~~ 228 (328)
.+.+||++| |.|..........+ ...++++-++++++...++ |. . ++++..+++.+.++. ..+||.|+.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~--~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY--E-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC--C-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--C-CEEEEEChhhhhchhhccCCccEEEE
Confidence 357899999 99985443333333 6788899999999887765 42 1 688888887763332 247999999
Q ss_pred ecCccchhhHHHHHHHHhhccCCCcEEEEecccc-CCcchhHHhhhHHHHHHHH-hcCCeEE
Q 020270 229 DTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLC-GGNAFFHVVYCHLVSLELE-NLGFSMQ 288 (328)
Q Consensus 229 d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g-~~~~~~~~~y~~~~~~~l~-~~G~~~~ 288 (328)
|.- -.....+.+++++.++|+|||++.++.... ..... ....++..++ +.||.+.
T Consensus 248 ~~p-~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 248 DPP-ETLEAIRAFVGRGIATLKGPRCAGYFGITRRESSLD----KWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp CCC-SSHHHHHHHHHHHHHTBCSTTCEEEEEECTTTCCHH----HHHHHHHHHHHTSCCEEE
T ss_pred CCC-CchHHHHHHHHHHHHHcccCCeEEEEEEecCcCCHH----HHHHHHHHHHHhcCcchh
Confidence 863 333346799999999999999543332222 01110 0123445566 8898753
No 257
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.53 E-value=0.00062 Score=58.97 Aligned_cols=129 Identities=12% Similarity=0.131 Sum_probs=77.9
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeecc-CHHHHHHHHHcC-----CCCC------CCeeEEecccchhcc-----
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEA-HPEVYERMLRTG-----WGEK------NNVKIIFGRWQDNLS----- 218 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~-~~~~~~~L~~~g-----~~~~------~~~~~~~g~w~~~~~----- 218 (328)
.+.+||++|+|+|..............++++. .+++++.+.++- .... .++.+....|.+...
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 45789999999999543333333346788888 899988876642 1111 246666555654321
Q ss_pred -CCCCCCEEEEecCccchhhHHHHHHHHhhccC---C--CcEEEEe-ccccCCcchhHHhhhHHHHHHHHhcC-CeEE
Q 020270 219 -QLESYDGIFFDTYGEYYEDLREFHQHLPKLLK---P--GGIYSYF-NGLCGGNAFFHVVYCHLVSLELENLG-FSMQ 288 (328)
Q Consensus 219 -~~~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~---~--gG~~~~~-~~~g~~~~~~~~~y~~~~~~~l~~~G-~~~~ 288 (328)
....||.|+.-....+..+...+++.+.++|+ | ||++.+. ...-. ......... ...+++.| |.++
T Consensus 159 ~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~---~~~~~~~~~-~~~l~~~G~f~v~ 232 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRP---HLAERDLAF-FRLVNADGALIAE 232 (281)
T ss_dssp HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------CTHH-HHHHHHSTTEEEE
T ss_pred ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeec---ccchhHHHH-HHHHHhcCCEEEE
Confidence 12579999873333456677799999999999 9 9976542 22111 100011112 22578899 9865
No 258
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.52 E-value=0.001 Score=58.64 Aligned_cols=125 Identities=16% Similarity=0.113 Sum_probs=83.4
Q ss_pred hhcCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCCCCCCEE
Q 020270 153 ICSGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQLESYDGI 226 (328)
Q Consensus 153 ~~~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~~~fD~i 226 (328)
....+..||++|+|.|........ ......++++.++..++.+.++ |. .++.+..++..+.......||.|
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~~~~~~~fD~I 191 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHIGELNVEFDKI 191 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGGGGGCCCEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhcccccccCCEE
Confidence 345667899999999985443332 2235788899999888887664 42 25788888776654433579999
Q ss_pred EEecC----------ccc---hh---------hHHHHHHHHhhccCCCcEEEEe-ccccCCcchhHHhhhHHHHHHHHhc
Q 020270 227 FFDTY----------GEY---YE---------DLREFHQHLPKLLKPGGIYSYF-NGLCGGNAFFHVVYCHLVSLELENL 283 (328)
Q Consensus 227 ~~d~f----------~e~---~~---------~l~~~~~~~~~lL~~gG~~~~~-~~~g~~~~~~~~~y~~~~~~~l~~~ 283 (328)
+.|+- |+. |+ ..+.+++++.++|||||++.+. +.+...- ...+++..|++.
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~E------ne~~v~~~l~~~ 265 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEE------NEFVIQWALDNF 265 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGG------THHHHHHHHHHS
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHH------hHHHHHHHHhcC
Confidence 99853 110 11 1148899999999999999975 3333321 123667778888
Q ss_pred CCe
Q 020270 284 GFS 286 (328)
Q Consensus 284 G~~ 286 (328)
||.
T Consensus 266 ~~~ 268 (315)
T 1ixk_A 266 DVE 268 (315)
T ss_dssp SEE
T ss_pred CCE
Confidence 866
No 259
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.52 E-value=0.00015 Score=59.73 Aligned_cols=123 Identities=14% Similarity=0.044 Sum_probs=67.4
Q ss_pred cCCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccC----CCCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQ----LESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~----~~~fD~i~~d 229 (328)
....+||++|+|+|........ ......++++-++.+++...++-.....++++..+++.+.... ..+||.|+.+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 4567899999999984433333 2345788889999888877654322222566777776653332 2679999986
Q ss_pred cCccc--------------------------hhhHHHHHHHHhhccCCCcE-EEEeccccCCcchhHHhhhHHHHHHHH-
Q 020270 230 TYGEY--------------------------YEDLREFHQHLPKLLKPGGI-YSYFNGLCGGNAFFHVVYCHLVSLELE- 281 (328)
Q Consensus 230 ~f~e~--------------------------~~~l~~~~~~~~~lL~~gG~-~~~~~~~g~~~~~~~~~y~~~~~~~l~- 281 (328)
.--.. .+.+..+++++.++|+|||+ +.+..+... .......|+
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---------~~~~~~~l~~ 179 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQ---------ADEVARLFAP 179 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSC---------HHHHHHHTGG
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCcc---------HHHHHHHHHH
Confidence 32100 01125888999999999999 555443211 123455677
Q ss_pred -hcCCe
Q 020270 282 -NLGFS 286 (328)
Q Consensus 282 -~~G~~ 286 (328)
+.||.
T Consensus 180 ~~~gf~ 185 (215)
T 4dzr_A 180 WRERGF 185 (215)
T ss_dssp GGGGTE
T ss_pred hhcCCc
Confidence 88986
No 260
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.48 E-value=0.00024 Score=60.28 Aligned_cols=100 Identities=19% Similarity=0.315 Sum_probs=70.2
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
...+||++|+|+|......... .....+++..+++++.+.+.-.....++.+..++..+.... ..||.|+...-..++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 4578999999999844333322 34678889999999888764322233677888887664433 579999874221122
Q ss_pred ---hhHHHHHHHHhhccCCCcEEEE
Q 020270 236 ---EDLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 236 ---~~l~~~~~~~~~lL~~gG~~~~ 257 (328)
.+...+++++.++|+|||++.+
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 4677999999999999999975
No 261
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.47 E-value=0.00062 Score=58.39 Aligned_cols=126 Identities=11% Similarity=-0.002 Sum_probs=81.7
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC-----CCCCeeEEecccchhccCCCCCCEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG-----EKNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~-----~~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
...++|++|+|.|......... +....+++..+++++...+.-.. ..+++++..++....+ ++||.|+.|.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC
Confidence 4578999999999855444444 36788899999999877653211 2356788777755544 6799999985
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
. .. ..|++.+.+.|+|||++++..+...... + ....+...|++.--.+......+
T Consensus 148 ~-dp----~~~~~~~~~~L~pgG~lv~~~~~~~~~~---~-~~~~~~~~l~~~F~~~~~~~~~v 202 (262)
T 2cmg_A 148 E-PD----IHRIDGLKRMLKEDGVFISVAKHPLLEH---V-SMQNALKNMGGVFSVAMPFVAPL 202 (262)
T ss_dssp C-CC----HHHHHHHHTTEEEEEEEEEEEECTTTCH---H-HHHHHHHHHHTTCSEEEEECCTT
T ss_pred C-Ch----HHHHHHHHHhcCCCcEEEEEcCCcccCH---H-HHHHHHHHHHHhCCceEEEEEcc
Confidence 4 21 2599999999999999998643221111 1 12223334566533455555555
No 262
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.47 E-value=0.00033 Score=58.72 Aligned_cols=104 Identities=22% Similarity=0.353 Sum_probs=73.6
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccC---CCCCCEEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQ---LESYDGIFF 228 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~---~~~fD~i~~ 228 (328)
....+||++|+|.|.......... .....+++.+++.++...+.- .....++.+..++..+.... -..||.|+.
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 356789999999998443333322 357888899998888776641 11224578888876654332 257999999
Q ss_pred ecCccchhhHHHHHHHHhhccCCCcEEEEeccc
Q 020270 229 DTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGL 261 (328)
Q Consensus 229 d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~ 261 (328)
+...+ +...+++.+.++|+|||++.+.+.+
T Consensus 133 ~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 133 DAAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp EGGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CCCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 87644 3458999999999999999986543
No 263
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.45 E-value=0.00045 Score=57.80 Aligned_cols=136 Identities=13% Similarity=0.096 Sum_probs=78.5
Q ss_pred cCCCceeeecccCCcchhHHhc-cCCceEEeeccC-HHHHHHH---HHcCCC-CCCCeeEEecccchhccCC-CCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAH-PEVYERM---LRTGWG-EKNNVKIIFGRWQDNLSQL-ESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~-~~~~~~L---~~~g~~-~~~~~~~~~g~w~~~~~~~-~~fD~i~ 227 (328)
..+..||++|||.|........ ......++++.. +.+++.. .+.-.. ...++.+..++..+..... ..+|.|+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 4567899999999985443332 344567788877 6665554 322111 1246778888776653322 4466665
Q ss_pred EecCccch------hhHHHHHHHHhhccCCCcEEEEeccccCCcc----------hhHHhhhH--HHHHHHHhcCCeEEE
Q 020270 228 FDTYGEYY------EDLREFHQHLPKLLKPGGIYSYFNGLCGGNA----------FFHVVYCH--LVSLELENLGFSMQL 289 (328)
Q Consensus 228 ~d~f~e~~------~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~----------~~~~~y~~--~~~~~l~~~G~~~~~ 289 (328)
... +-.. .+...+++++.++|||||++.+....+.... ....-|.. -.+..|+++||.++-
T Consensus 103 ~~~-~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~ 181 (225)
T 3p2e_A 103 ILF-PWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDD 181 (225)
T ss_dssp EES-CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEE
T ss_pred EeC-CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeee
Confidence 532 2111 1123689999999999999998333322211 11111111 155688999999665
Q ss_pred EE
Q 020270 290 IP 291 (328)
Q Consensus 290 ~~ 291 (328)
.+
T Consensus 182 ~~ 183 (225)
T 3p2e_A 182 VK 183 (225)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 264
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.45 E-value=0.0008 Score=57.13 Aligned_cols=116 Identities=19% Similarity=0.200 Sum_probs=79.3
Q ss_pred cCCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHc-----CCCCCCCeeEEecccchhccCCCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRT-----GWGEKNNVKIIFGRWQDNLSQLESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~-----g~~~~~~~~~~~g~w~~~~~~~~~fD~i~ 227 (328)
..+..||++|+|.|......... ......+++.++++++.+.+. | ..++.+..+++.+.......||.|+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~~~~~~~~~D~v~ 171 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGKLEEAELEEAAYDGVA 171 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESCGGGCCCCTTCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECchhhcCCCCCCcCEEE
Confidence 45678999999999844333222 235788889999999888765 4 3467787787766522225799999
Q ss_pred EecCccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 228 FDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 228 ~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
.+. +.. ..+++++.++|+|||++.++.... ... ......|++.||.
T Consensus 172 ~~~-~~~----~~~l~~~~~~L~~gG~l~~~~~~~-------~~~-~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 172 LDL-MEP----WKVLEKAALALKPDRFLVAYLPNI-------TQV-LELVRAAEAHPFR 217 (258)
T ss_dssp EES-SCG----GGGHHHHHHHEEEEEEEEEEESCH-------HHH-HHHHHHHTTTTEE
T ss_pred ECC-cCH----HHHHHHHHHhCCCCCEEEEEeCCH-------HHH-HHHHHHHHHCCCc
Confidence 864 222 278889999999999999765321 011 1222357789998
No 265
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.44 E-value=0.00043 Score=62.73 Aligned_cols=147 Identities=16% Similarity=0.216 Sum_probs=92.5
Q ss_pred hcCCCceeeecccCCcchhHHhccCCc-eEEeeccCHHHHHHHHH-----------cCCCCCCCeeEEecccchhccC--
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPV-THTILEAHPEVYERMLR-----------TGWGEKNNVKIIFGRWQDNLSQ-- 219 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~-~~~a~e~~~~~~~~L~~-----------~g~~~~~~~~~~~g~w~~~~~~-- 219 (328)
...+..++++|+|+|..........+. ..++++-.+++++...+ .|. ...++.+..|+..+....
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl-~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK-KHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB-CCCEEEEEECCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC-CCCCeEEEECcccCCccccc
Confidence 356678999999999844332222233 47889988876665543 121 124688888986654432
Q ss_pred CCCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeCCCCCC
Q 020270 220 LESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPVKNCLG 299 (328)
Q Consensus 220 ~~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~~~~~~ 299 (328)
...||+|+...+. .+.++...+.++++.|||||++++.-.+.+.+..+. .+.|...+=.+++++..-.+ +
T Consensus 250 ~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~~i~-------~rnl~di~~il~v~el~~~~--~ 319 (438)
T 3uwp_A 250 IANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPLNFRIN-------SRNLSDIGTIMRVVELSPLK--G 319 (438)
T ss_dssp HHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCTTCCCC-------SSSTTSGGGSEEEEECCCCT--T
T ss_pred cCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCCCCCCC-------cccccChhhhheeeeccCCC--C
Confidence 1469999987653 456788888999999999999998866665533211 12355555456666655411 2
Q ss_pred cccccccccccc
Q 020270 300 EEVWEGVKHKYW 311 (328)
Q Consensus 300 ~~~w~~~~~~~~ 311 (328)
---|.+-.=.|+
T Consensus 320 sVSWT~~~g~yy 331 (438)
T 3uwp_A 320 SVSWTGKPVSYY 331 (438)
T ss_dssp CCCTTSSCCCCE
T ss_pred ceeeccCCccEE
Confidence 234655544454
No 266
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.44 E-value=0.00068 Score=56.94 Aligned_cols=129 Identities=17% Similarity=0.120 Sum_probs=76.2
Q ss_pred cCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhcc---CCCCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLS---QLESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~---~~~~fD~i~~d 229 (328)
..+..||++|+|+|........ +..-..++++-++.+++.|++... ...++....++...... ..+.||.|+.|
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~-~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQ-RRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHH-HCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhh-hcCCeEEEEcccccchhhhccccceEEEEec
Confidence 4567899999999984432221 234477889999988766654321 12567777776543221 12579999999
Q ss_pred cCccchhhHHHH-HHHHhhccCCCcEEEEeccccC-C-cchhHHhhhHHHHHHHHhcCCeEE
Q 020270 230 TYGEYYEDLREF-HQHLPKLLKPGGIYSYFNGLCG-G-NAFFHVVYCHLVSLELENLGFSMQ 288 (328)
Q Consensus 230 ~f~e~~~~l~~~-~~~~~~lL~~gG~~~~~~~~g~-~-~~~~~~~y~~~~~~~l~~~G~~~~ 288 (328)
.... +..+. ...+.+.|||||+|.+..-... + ...-.+++. .+...|++.||++.
T Consensus 154 ~a~~---~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~-~~~~~L~~~gf~~~ 211 (232)
T 3id6_C 154 IAQP---DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYK-TEVEKLENSNFETI 211 (232)
T ss_dssp CCCT---THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTT-HHHHHHHHTTEEEE
T ss_pred CCCh---hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHH-HHHHHHHHCCCEEE
Confidence 7542 22244 4456669999999997521111 0 000111232 34457888899844
No 267
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.43 E-value=0.0053 Score=60.33 Aligned_cols=102 Identities=18% Similarity=0.170 Sum_probs=75.5
Q ss_pred cCCCceeeecccCCcchhHHhccCC--ceEEeeccCHHHHHHHHHc-----CC--CCCCCeeEEecccchhccCCCCCCE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP--VTHTILEAHPEVYERMLRT-----GW--GEKNNVKIIFGRWQDNLSQLESYDG 225 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~--~~~~a~e~~~~~~~~L~~~-----g~--~~~~~~~~~~g~w~~~~~~~~~fD~ 225 (328)
..+.+||++|+|.|..........+ ...++++..+.+++...+. .. ....++++..++..+.......||.
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 3677899999999986554444432 5788899999999888661 11 0124688888888776666678999
Q ss_pred EEEecCccchhhH--HHHHHHHhhccCCCcEEEE
Q 020270 226 IFFDTYGEYYEDL--REFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 226 i~~d~f~e~~~~l--~~~~~~~~~lL~~gG~~~~ 257 (328)
|+....-+++.+. ..+++++.++|+|| .+.+
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LII 832 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIV 832 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEE
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEE
Confidence 9998777777653 36899999999999 5544
No 268
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.42 E-value=0.0018 Score=55.74 Aligned_cols=122 Identities=16% Similarity=0.218 Sum_probs=83.3
Q ss_pred cCCCceeeecccCCcchhHHh-ccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecC-
Q 020270 155 SGGGHILNIGFGMGLVDTAIQ-QYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTY- 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~-~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f- 231 (328)
.....||++|+|.|....... ........+++.+++.++...++-... ..++.+..+++.+... ...||.|+.+.-
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~-~~~fD~Iv~npPy 186 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA-GQQFAMIVSNPPY 186 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT-TCCEEEEEECCCC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc-cCCccEEEECCCC
Confidence 345689999999998543333 223457888999999988876642110 1258888888776543 357999998731
Q ss_pred ----------------c--------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 232 ----------------G--------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 232 ----------------~--------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
| .....++.+++++.++|+|||++.+..+... ...++..|++.||.
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~l~~~Gf~ 256 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQ---------GEAVRQAFILAGYH 256 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSC---------HHHHHHHHHHTTCT
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchH---------HHHHHHHHHHCCCc
Confidence 0 0013557899999999999999998654322 22455568889997
No 269
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.42 E-value=0.00058 Score=58.67 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=65.7
Q ss_pred cCCCceeeecccCCcchhHHhcc-CC-ceEEeeccCHH------HHHHHHHcC--CCCCCCeeEEecc-cc--hhccCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-SP-VTHTILEAHPE------VYERMLRTG--WGEKNNVKIIFGR-WQ--DNLSQLE 221 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~~-~~~~a~e~~~~------~~~~L~~~g--~~~~~~~~~~~g~-w~--~~~~~~~ 221 (328)
..+.+||++|+|.|......... .+ ....+++..+. +++...+.- .....++++..++ .. .......
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 45678999999999844333222 22 56777775543 454443321 1112457777665 22 1222235
Q ss_pred CCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEec
Q 020270 222 SYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 222 ~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
+||.|+....-++..+...+.+.+..+++|||++.+..
T Consensus 122 ~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 79999987776777666677777777777899999753
No 270
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.42 E-value=0.00027 Score=56.51 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=71.5
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC--CCCeeEEecccchhccC-CCCCCEEEEecCc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE--KNNVKIIFGRWQDNLSQ-LESYDGIFFDTYG 232 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~--~~~~~~~~g~w~~~~~~-~~~fD~i~~d~f~ 232 (328)
....||++|+|.|...............+++.++++++.+.++-... ..++.+..+++.+.... ...||.|+.+.-
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~- 109 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP- 109 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS-
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC-
Confidence 45789999999998544333333357888999999998887642111 23578888887764432 246999999743
Q ss_pred cchhhHHHHHHHHh--hccCCCcEEEEecc
Q 020270 233 EYYEDLREFHQHLP--KLLKPGGIYSYFNG 260 (328)
Q Consensus 233 e~~~~l~~~~~~~~--~lL~~gG~~~~~~~ 260 (328)
-......++++.+. ++|+|||++.+.+.
T Consensus 110 ~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 110 YAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp SHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 22234456777776 99999999996543
No 271
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.42 E-value=0.00037 Score=58.79 Aligned_cols=121 Identities=13% Similarity=0.115 Sum_probs=78.5
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHc-------CCCCCCCeeEEecccchhcc---CCCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRT-------GWGEKNNVKIIFGRWQDNLS---QLESY 223 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~-------g~~~~~~~~~~~g~w~~~~~---~~~~f 223 (328)
.....+|++|||.|.......... ....++++-.+.+++...+. ......++.++.++..+.+. ...+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 344679999999998554433333 35788999999988766432 11123578888888765322 33679
Q ss_pred CEEEEecCccchhhH---------HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcC
Q 020270 224 DGIFFDTYGEYYEDL---------REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLG 284 (328)
Q Consensus 224 D~i~~d~f~e~~~~l---------~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G 284 (328)
|.|+. .|+..|... ..+++++.++|+|||++.+.+. ...|..-+...|.+.|
T Consensus 125 D~v~~-~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td--------~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 125 TKMFF-LFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD--------VLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEE-ESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES--------CHHHHHHHHHHHHTST
T ss_pred eEEEE-eCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC--------CHHHHHHHHHHHHHCC
Confidence 99987 356655321 2799999999999999986532 1245555555677776
No 272
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.40 E-value=0.00049 Score=62.62 Aligned_cols=134 Identities=12% Similarity=0.079 Sum_probs=86.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC-CCCCEEEEecCc-
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL-ESYDGIFFDTYG- 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~-~~fD~i~~d~f~- 232 (328)
..+.+||++|+|+|...........- .++++.++..++.+.++-.......++..++..+.+... ..||.|+.|.-.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 44778999999999844333223333 788889999988876641111111234466655544332 349999998642
Q ss_pred --------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEe
Q 020270 233 --------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPL 292 (328)
Q Consensus 233 --------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~ 292 (328)
....+.++++..+.++|+|||++.+++........ .+...++..+.++|..++..+.
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~---~f~~~v~~a~~~~g~~~~i~~~ 356 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLE---DLLEVARRAAADLGRRLRVHRV 356 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHH---HHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHH---HHHHHHHHHHHHhCCeEEEEEE
Confidence 01234568888999999999999976554443322 4556777778888988665543
No 273
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.39 E-value=0.00069 Score=61.75 Aligned_cols=135 Identities=13% Similarity=0.054 Sum_probs=93.0
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC---CCCeeEEecccchhccC----CCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE---KNNVKIIFGRWQDNLSQ----LESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~---~~~~~~~~g~w~~~~~~----~~~fD~i~ 227 (328)
..+..||++|+|+|..............++++.+++.++.+.++-... ..++++..++..+.... -..||.|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 456789999999998544333333457888999999988876642111 11678888887665442 24799999
Q ss_pred EecCc---------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEe
Q 020270 228 FDTYG---------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPL 292 (328)
Q Consensus 228 ~d~f~---------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~ 292 (328)
.|.-. .....+.+++..+.++|+|||++.+.+.-+...+ +.+...++..+.++|+.++..+.
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~i~~~~~~~g~~~~~i~~ 369 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTS---DLFQKIIADAAIDAGRDVQFIEQ 369 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCH---HHHHHHHHHHHHHHTCCEEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH---HHHHHHHHHHHHHcCCeEEEEEE
Confidence 98631 1124566899999999999999998765544432 24556777788889987665543
No 274
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.39 E-value=0.0016 Score=58.43 Aligned_cols=102 Identities=15% Similarity=0.194 Sum_probs=71.2
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
....+|+++|+|.|.......... .....+++- +.+++...+.- .....++++..++..+.. ...+|.|+....
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~D~v~~~~v 265 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES--YPEADAVLFCRI 265 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC--CCCCSEEEEESC
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC--CCCCCEEEEech
Confidence 456789999999998544333333 345667777 77777665431 112335888888766542 234599998777
Q ss_pred ccchhh--HHHHHHHHhhccCCCcEEEEec
Q 020270 232 GEYYED--LREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 232 ~e~~~~--l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
-.+|.+ ...+++++.++|+|||++.+..
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 677765 7899999999999999997654
No 275
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.38 E-value=0.0021 Score=55.34 Aligned_cols=124 Identities=17% Similarity=0.078 Sum_probs=80.8
Q ss_pred hcCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccC----CCCC
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQ----LESY 223 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~----~~~f 223 (328)
...+..||++|+|.|........ ......++++.++..++.+.++ |. .++.+..++..+.... ...|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhhhhccccC
Confidence 34567899999999985433332 2235788899999888877654 32 2678888876655431 3579
Q ss_pred CEEEEecCcc------------------chhhHHHHHHHHhhccCCCcEEEEec-cccCCcchhHHhhhHHHHHHHHh-c
Q 020270 224 DGIFFDTYGE------------------YYEDLREFHQHLPKLLKPGGIYSYFN-GLCGGNAFFHVVYCHLVSLELEN-L 283 (328)
Q Consensus 224 D~i~~d~f~e------------------~~~~l~~~~~~~~~lL~~gG~~~~~~-~~g~~~~~~~~~y~~~~~~~l~~-~ 283 (328)
|.|+.|+-.. ......++++++.++|+|||++.+.+ .+...- ...+++..|++ -
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~e------ne~~v~~~l~~~~ 231 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEE------NEEVIKYILQKRN 231 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTS------SHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHH------hHHHHHHHHHhCC
Confidence 9999994311 11234689999999999999999753 332221 12355556654 4
Q ss_pred CCe
Q 020270 284 GFS 286 (328)
Q Consensus 284 G~~ 286 (328)
+|+
T Consensus 232 ~~~ 234 (274)
T 3ajd_A 232 DVE 234 (274)
T ss_dssp SEE
T ss_pred CcE
Confidence 444
No 276
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.37 E-value=0.00044 Score=58.32 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=68.5
Q ss_pred CCCceeeecccCCcchhHHhc-----cCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchh--ccCC--CCCCEE
Q 020270 156 GGGHILNIGFGMGLVDTAIQQ-----YSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDN--LSQL--ESYDGI 226 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~-----~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~--~~~~--~~fD~i 226 (328)
...+||++|+|+|........ ......++++.++++++.... ...+++++.+++.+. +... .+||.|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 357899999999985443322 223567888877776654432 125688888887664 2222 269999
Q ss_pred EEecCccchhhHHHHHHHHhh-ccCCCcEEEEecc
Q 020270 227 FFDTYGEYYEDLREFHQHLPK-LLKPGGIYSYFNG 260 (328)
Q Consensus 227 ~~d~f~e~~~~l~~~~~~~~~-lL~~gG~~~~~~~ 260 (328)
+.|.... +...++.++.+ +|+|||++.+...
T Consensus 157 ~~d~~~~---~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 157 FIDNAHA---NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEESSCS---SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EECCchH---hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9988743 45589999997 9999999997543
No 277
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.36 E-value=0.00029 Score=60.79 Aligned_cols=134 Identities=15% Similarity=0.181 Sum_probs=88.1
Q ss_pred hcCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
...+..+|++|+|+|......... .....++++.+++.++.+.++-.. .-.++.+..++..+. .....||.|+.|.-
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGYV 195 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECCc
Confidence 345678999999999854333322 245788999999999988764211 113577888887766 33457999999875
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
. ...+++..+.+.|+|||++.+.+....... .+......+..-+..|..++-..+.+
T Consensus 196 ~----~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (272)
T 3a27_A 196 H----KTHKFLDKTFEFLKDRGVIHYHETVAEKIM--YERPIERLKFYAEKNGYKLIDYEVRK 252 (272)
T ss_dssp S----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--TTHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred c----cHHHHHHHHHHHcCCCCEEEEEEcCccccc--cccHHHHHHHHHHHhCCeeEEeEEEE
Confidence 4 233788999999999999987665543321 12333444444455677766544444
No 278
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.36 E-value=0.00078 Score=58.10 Aligned_cols=118 Identities=20% Similarity=0.256 Sum_probs=78.8
Q ss_pred cCCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcCCCC--CCCeeEEecccchhccCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTGWGE--KNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g~~~--~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
..+..||++|+|.|......... ......+++.+++.++.+.++-... ..++.+..+++.+... ...||.|+.+.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~-~~~fD~Vi~~~ 187 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS-DQMYDAVIADI 187 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC-SCCEEEEEECC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc-CCCccEEEEcC
Confidence 45678999999999844333222 2357888999999988877652111 2467888887766322 25799999853
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
+. ...+++++.++|+|||++.+..... .........|++.||.
T Consensus 188 -~~----~~~~l~~~~~~LkpgG~l~i~~~~~--------~~~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 188 -PD----PWNHVQKIASMMKPGSVATFYLPNF--------DQSEKTVLSLSASGMH 230 (275)
T ss_dssp -SC----GGGSHHHHHHTEEEEEEEEEEESSH--------HHHHHHHHHSGGGTEE
T ss_pred -cC----HHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCe
Confidence 22 2378899999999999999765311 0112333457889988
No 279
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.35 E-value=0.0014 Score=58.07 Aligned_cols=130 Identities=16% Similarity=0.138 Sum_probs=83.1
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
....+|+++|+|.|.......... .....+.+.. .+++...+.-. ....++++..+++.+.... ..||.|+....
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~v~~~~~ 241 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG-NDYDLVLLPNF 241 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC-SCEEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC-CCCcEEEEcch
Confidence 456789999999998443333322 3466777766 77776655310 1123577877876553222 34999998766
Q ss_pred ccch--hhHHHHHHHHhhccCCCcEEEEeccccCCc------chhHHhh------------hHHHHHHHHhcCCe
Q 020270 232 GEYY--EDLREFHQHLPKLLKPGGIYSYFNGLCGGN------AFFHVVY------------CHLVSLELENLGFS 286 (328)
Q Consensus 232 ~e~~--~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~------~~~~~~y------------~~~~~~~l~~~G~~ 286 (328)
..+| .+...+++++.++|+|||++.+........ ...++.+ ....+..|+++||+
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~ 316 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFS 316 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCS
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCC
Confidence 6667 556799999999999999888764433221 1122221 12455578999998
No 280
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.33 E-value=0.003 Score=56.52 Aligned_cols=130 Identities=16% Similarity=0.128 Sum_probs=88.8
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC-CCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW-GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~-~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
.....|+++|+|.|..........|-...+....|++++...+.-. ....++++..|+..+. ....+|.+++-..--
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~--~~~~~D~~~~~~vlh 255 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD--PLPEADLYILARVLH 255 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS--CCCCCSEEEEESSGG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccC--CCCCceEEEeeeecc
Confidence 4557899999999996655555666666677777999888776432 1235788888885432 234589998877766
Q ss_pred chhh--HHHHHHHHhhccCCCcEEEEeccccC-C-----cchhHHhhh-----------HHHHHHHHhcCCe
Q 020270 234 YYED--LREFHQHLPKLLKPGGIYSYFNGLCG-G-----NAFFHVVYC-----------HLVSLELENLGFS 286 (328)
Q Consensus 234 ~~~~--l~~~~~~~~~lL~~gG~~~~~~~~g~-~-----~~~~~~~y~-----------~~~~~~l~~~G~~ 286 (328)
+|.+ ...+++++++.|+|||++.....+-+ + ....+|.+- .-.+..|+++||+
T Consensus 256 ~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~ 327 (353)
T 4a6d_A 256 DWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFR 327 (353)
T ss_dssp GSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCE
T ss_pred cCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 7754 45889999999999999998754332 2 122334321 1234578999998
No 281
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.30 E-value=0.00042 Score=56.80 Aligned_cols=100 Identities=16% Similarity=0.266 Sum_probs=71.9
Q ss_pred CCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 157 GGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
...||++|+|.|......... ......+++..+++++.+.++-... ..++.+..+++.+... ...||.|+...+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS-EPPFDGVISRAF--- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC-CSCEEEEECSCS---
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc-cCCcCEEEEecc---
Confidence 578999999999854333322 2457888899999988876631111 1238888888776542 357999997654
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEeccc
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYFNGL 261 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~~~~ 261 (328)
.++..+++.+.++|+|||++.+..+.
T Consensus 142 -~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 142 -ASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp -SSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred -CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 34558999999999999999987553
No 282
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.30 E-value=0.0025 Score=57.29 Aligned_cols=99 Identities=16% Similarity=0.215 Sum_probs=67.6
Q ss_pred cCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+|+++|+|+|..........| ...+...- +.+++.. ....++++..++..+..+ .. |.|+....-.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-----~~~~~v~~~~~D~~~~~p--~~-D~v~~~~vlh 270 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEA-----PQFPGVTHVGGDMFKEVP--SG-DTILMKWILH 270 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTC-----CCCTTEEEEECCTTTCCC--CC-SEEEEESCGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhh-----hhcCCeEEEeCCcCCCCC--CC-CEEEehHHhc
Confidence 4567899999999995544433333 33444444 7765432 234678888888665322 23 9998877666
Q ss_pred ch--hhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 234 YY--EDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 234 ~~--~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
+| ++...+++++.++|+|||++.+....-
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 67 445689999999999999999865443
No 283
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.29 E-value=0.0018 Score=55.37 Aligned_cols=101 Identities=12% Similarity=0.083 Sum_probs=70.9
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhcc----C-CCCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLS----Q-LESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~----~-~~~fD~i~~d 229 (328)
..+.+||++|||+|......... .....+++..+.+++.+.++-... ....+|.+... . ...||.|+.+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~~~~~~~~~fD~Vv~~ 117 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR-----CVTIDLLDITAEIPKELAGHFDFVLND 117 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSCCCGGGTTCCSEEEEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc-----cceeeeeecccccccccCCCccEEEEh
Confidence 45678999999999844333222 246788999999999998764322 23344444332 1 2579999998
Q ss_pred cCccch--hhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 230 TYGEYY--EDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 230 ~f~e~~--~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
..-.++ ++++.++.++.++| |||++.+....|
T Consensus 118 ~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 118 RLINRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred hhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 765544 46778999999999 999998765544
No 284
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.29 E-value=0.0012 Score=56.92 Aligned_cols=133 Identities=13% Similarity=0.135 Sum_probs=88.5
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
...+..++++++|+|...-.........-++++.+|..++.+.++-. .....+++..++..++... ..||.|..+..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~-~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE-NIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC-SCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccc-cCCCEEEECCC
Confidence 45678899999999984432222333467889999999999877421 1234577888876665433 56999999865
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEee
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLP 293 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~ 293 (328)
+.. . +|++.+.++|++||++-+|+..... .. .+-.....+...++.|+.++-..+.
T Consensus 202 ~~~--~--~~l~~a~~~lk~gG~ih~~~~~~e~-~~-~~~~~e~i~~~~~~~g~~v~~~~~~ 257 (278)
T 3k6r_A 202 VRT--H--EFIPKALSIAKDGAIIHYHNTVPEK-LM-PREPFETFKRITKEYGYDVEKLNEL 257 (278)
T ss_dssp SSG--G--GGHHHHHHHEEEEEEEEEEEEEEGG-GT-TTTTHHHHHHHHHHTTCEEEEEEEE
T ss_pred CcH--H--HHHHHHHHHcCCCCEEEEEeeeccc-cc-chhHHHHHHHHHHHcCCcEEEEEEE
Confidence 432 2 7888889999999999866433221 11 1111235566788899998765543
No 285
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.28 E-value=0.0019 Score=58.23 Aligned_cols=134 Identities=19% Similarity=0.167 Sum_probs=84.4
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
....+|+++|+|.|.......... ....++++- +.+++...+.- .....++++..+++.+.++ ..||.|+....
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~D~v~~~~v 257 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP--VTADVVLLSFV 257 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS--CCEEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC--CCCCEEEEecc
Confidence 345789999999998543333322 346677777 88888776531 1123468888887654222 24999998776
Q ss_pred ccchhhH--HHHHHHHhhccCCCcEEEEecc--ccCC-c----chhHHhh----------h-HHHHHHHHhcCCe-EEEE
Q 020270 232 GEYYEDL--REFHQHLPKLLKPGGIYSYFNG--LCGG-N----AFFHVVY----------C-HLVSLELENLGFS-MQLI 290 (328)
Q Consensus 232 ~e~~~~l--~~~~~~~~~lL~~gG~~~~~~~--~g~~-~----~~~~~~y----------~-~~~~~~l~~~G~~-~~~~ 290 (328)
-.+|.+. ..+++++.++|+|||++.+... ..+. . ...++.+ . ...+..|+++||+ ++.+
T Consensus 258 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 337 (374)
T 1qzz_A 258 LLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASER 337 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 6667654 4899999999999999887644 3221 1 1122222 1 1345578899998 3444
Q ss_pred E
Q 020270 291 P 291 (328)
Q Consensus 291 ~ 291 (328)
.
T Consensus 338 ~ 338 (374)
T 1qzz_A 338 T 338 (374)
T ss_dssp E
T ss_pred E
Confidence 3
No 286
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.28 E-value=0.00053 Score=56.25 Aligned_cols=103 Identities=16% Similarity=0.070 Sum_probs=70.4
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCC-CCeeEEecccchhccC-CCCCCEEEEecCcc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK-NNVKIIFGRWQDNLSQ-LESYDGIFFDTYGE 233 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~-~~~~~~~g~w~~~~~~-~~~fD~i~~d~f~e 233 (328)
.+.+||++|+|+|..............++++.++++++.+.++-.... .++++..+++.+.... ...||.|+.|.- -
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p-~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP-F 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-S
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-C
Confidence 457899999999985443222233477889999999988866421111 4688888887765443 357999999864 2
Q ss_pred chhhHHHHHHHHhh--ccCCCcEEEEec
Q 020270 234 YYEDLREFHQHLPK--LLKPGGIYSYFN 259 (328)
Q Consensus 234 ~~~~l~~~~~~~~~--lL~~gG~~~~~~ 259 (328)
+.....++++.+.+ +|+|||++.+.+
T Consensus 133 ~~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 133 RRGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp STTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 23444577777755 699999998643
No 287
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.28 E-value=0.0024 Score=57.52 Aligned_cols=99 Identities=19% Similarity=0.227 Sum_probs=67.0
Q ss_pred cCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+|+++|+|+|..........| ...+..+- +.+++.. ....++++..++..+..+ .. |.|+....-.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-----~~~~~v~~~~~d~~~~~p--~~-D~v~~~~vlh 272 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDA-----PAFSGVEHLGGDMFDGVP--KG-DAIFIKWICH 272 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTC-----CCCTTEEEEECCTTTCCC--CC-SEEEEESCGG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhh-----hhcCCCEEEecCCCCCCC--CC-CEEEEechhh
Confidence 3457899999999995544433333 33444445 7766432 234678888888665333 23 9988876666
Q ss_pred chhh--HHHHHHHHhhccCCCcEEEEecccc
Q 020270 234 YYED--LREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 234 ~~~~--l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
+|.+ ...+++++.++|+|||++.+.....
T Consensus 273 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 273 DWSDEHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp GBCHHHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 6654 4588999999999999999865443
No 288
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.26 E-value=0.0019 Score=57.74 Aligned_cols=128 Identities=15% Similarity=0.219 Sum_probs=83.1
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|+|.......... ....++.+. +.+++...+ ..++++..++..+.. ..||.|+....-.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~---p~~D~v~~~~~lh 257 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG-----SNNLTYVGGDMFTSI---PNADAVLLKYILH 257 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----BTTEEEEECCTTTCC---CCCSEEEEESCGG
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----CCCcEEEeccccCCC---CCccEEEeehhhc
Confidence 456789999999998544443332 345666666 777654322 245888888764422 2499999877767
Q ss_pred chhhHH--HHHHHHhhccCC---CcEEEEeccccCCcc---------hhHHh---------hh-HHHHHHHHhcCCe-EE
Q 020270 234 YYEDLR--EFHQHLPKLLKP---GGIYSYFNGLCGGNA---------FFHVV---------YC-HLVSLELENLGFS-MQ 288 (328)
Q Consensus 234 ~~~~l~--~~~~~~~~lL~~---gG~~~~~~~~g~~~~---------~~~~~---------y~-~~~~~~l~~~G~~-~~ 288 (328)
+|.+.. .+++++.++|+| ||++.+......... ..+|. ++ ...+..|+++||+ ++
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 337 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYK 337 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeE
Confidence 787655 999999999999 999987644332211 12222 11 2455678999998 34
Q ss_pred EEE
Q 020270 289 LIP 291 (328)
Q Consensus 289 ~~~ 291 (328)
...
T Consensus 338 ~~~ 340 (352)
T 1fp2_A 338 ISP 340 (352)
T ss_dssp EEE
T ss_pred EEe
Confidence 333
No 289
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.26 E-value=0.00076 Score=55.42 Aligned_cols=100 Identities=18% Similarity=0.150 Sum_probs=71.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|.|......... ....++++.++++++...++-.. ...++++..+++........+||.|+.+....
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPP 154 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchh
Confidence 45678999999999844333322 45778899999988887664211 11258888888766555556899999987765
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccc
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGL 261 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~ 261 (328)
++.+ .+.++|+|||++.+..+-
T Consensus 155 ~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 155 EIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SCCT------HHHHTEEEEEEEEEEECS
T ss_pred hhhH------HHHHhcccCcEEEEEEcC
Confidence 5543 578899999999976543
No 290
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.25 E-value=0.00087 Score=59.91 Aligned_cols=132 Identities=14% Similarity=0.190 Sum_probs=83.2
Q ss_pred CCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhcc-CCCCCCEEEEecCc
Q 020270 157 GGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLS-QLESYDGIFFDTYG 232 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~-~~~~fD~i~~d~f~ 232 (328)
..+|+++|+|.|......... ......+.+. +.+++...+.- .....++++..+++.+... ....||.|+....-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 679999999999854433332 2345555655 55655544321 1123458888888665431 22459999997776
Q ss_pred cchhh--HHHHHHHHhhccCCCcEEEEeccccCCc------chhHHhhh-----------H-HHHHHHHhcCCeEEE
Q 020270 233 EYYED--LREFHQHLPKLLKPGGIYSYFNGLCGGN------AFFHVVYC-----------H-LVSLELENLGFSMQL 289 (328)
Q Consensus 233 e~~~~--l~~~~~~~~~lL~~gG~~~~~~~~g~~~------~~~~~~y~-----------~-~~~~~l~~~G~~~~~ 289 (328)
.+|.+ ...+++++.++|+|||++.+........ ...++... . ..+..|+++||++.-
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 67764 4799999999999999998864332221 12222211 1 345688999999554
No 291
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.25 E-value=0.0014 Score=58.17 Aligned_cols=127 Identities=13% Similarity=0.077 Sum_probs=81.4
Q ss_pred CceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 158 GHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 158 ~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
.+|+++|+|.|.......... ....++.+- +.+++...+.-.. ...++++..+++.+..+ ..||.|+....-.+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVP--SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC--SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC--CCCCEEEEchhccC
Confidence 789999999998443333322 345666776 7776666543110 12458888887655322 46999998776666
Q ss_pred hhhH--HHHHHHHhhccCCCcEEEEeccccCC-----cchhHHhhh-----------HHHHHHHHhcCCeE
Q 020270 235 YEDL--REFHQHLPKLLKPGGIYSYFNGLCGG-----NAFFHVVYC-----------HLVSLELENLGFSM 287 (328)
Q Consensus 235 ~~~l--~~~~~~~~~lL~~gG~~~~~~~~g~~-----~~~~~~~y~-----------~~~~~~l~~~G~~~ 287 (328)
|.+- ..+++++.++|+|||++.+....-+. ....++.+. ...+..|+++||++
T Consensus 246 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 316 (334)
T 2ip2_A 246 LDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAV 316 (334)
T ss_dssp CCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCce
Confidence 7543 48999999999999999887443222 112222211 13345788999983
No 292
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.25 E-value=0.0011 Score=55.31 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=69.1
Q ss_pred CCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhc--cC-CCCCCEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNL--SQ-LESYDGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~--~~-~~~fD~i~~d~ 230 (328)
.+..||++|+|.|......... ......+++..+++++.+.+.-.. ..++.+..++..+.. .. ..+||.|+.|.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-RRNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-CTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-cCCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 4568999999999844333222 124678889999888877664322 267888888765522 11 24799999986
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEe
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
... + ..+.++.++.++|+|||++.+.
T Consensus 152 ~~~-~-~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 152 AQP-T-QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CST-T-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCH-h-HHHHHHHHHHHhcCCCCEEEEE
Confidence 522 1 2236699999999999999886
No 293
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.24 E-value=0.001 Score=60.54 Aligned_cols=132 Identities=13% Similarity=0.112 Sum_probs=88.9
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC--CCCeeEEecccchhccC----CCCCCEEEEe
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE--KNNVKIIFGRWQDNLSQ----LESYDGIFFD 229 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~--~~~~~~~~g~w~~~~~~----~~~fD~i~~d 229 (328)
.+..+|++|+|+|..............++++.+++.++.+.++-... ..++++..++..+.... ...||.|+.|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 66789999999998544333333447888999999888876642111 12678888887665432 3579999998
Q ss_pred cCc--c-------chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEE
Q 020270 230 TYG--E-------YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLI 290 (328)
Q Consensus 230 ~f~--e-------~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~ 290 (328)
.-. . ......+++..+.++|+|||++.+.+........ .+...++......|..++..
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~i 363 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQ---MFKDMIIAAGAKAGKFLKML 363 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHH---HHHHHHHHHHHHTTEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHH---HHHHHHHHHHHHcCCeEEEE
Confidence 631 1 1144568889999999999999877554433322 44556666777788775543
No 294
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.23 E-value=0.0013 Score=58.87 Aligned_cols=135 Identities=18% Similarity=0.162 Sum_probs=83.3
Q ss_pred cCCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
....+||++|+|.|........ ......+.++- +.+++...+.- .....++++..+++.+..+ ..||.|+....
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~D~v~~~~v 258 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP--RKADAIILSFV 258 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS--SCEEEEEEESC
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC--CCccEEEEccc
Confidence 3457899999999985433332 22345556665 66666555421 1123368888888655332 24999988776
Q ss_pred ccchhhH--HHHHHHHhhccCCCcEEEEeccc--cCCc----chhHHhhh-----------HHHHHHHHhcCCeE-EEEE
Q 020270 232 GEYYEDL--REFHQHLPKLLKPGGIYSYFNGL--CGGN----AFFHVVYC-----------HLVSLELENLGFSM-QLIP 291 (328)
Q Consensus 232 ~e~~~~l--~~~~~~~~~lL~~gG~~~~~~~~--g~~~----~~~~~~y~-----------~~~~~~l~~~G~~~-~~~~ 291 (328)
-.+|.+. ..+++++.++|+|||++.+.... .... ...++.+. ...+..|+++||++ +...
T Consensus 259 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 259 LLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 6666543 58999999999999999876443 2111 11222221 14455789999983 3443
Q ss_pred e
Q 020270 292 L 292 (328)
Q Consensus 292 ~ 292 (328)
+
T Consensus 339 ~ 339 (360)
T 1tw3_A 339 L 339 (360)
T ss_dssp E
T ss_pred C
Confidence 3
No 295
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.22 E-value=0.0011 Score=60.20 Aligned_cols=133 Identities=17% Similarity=0.145 Sum_probs=90.3
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhccC----CCCCCEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLSQ----LESYDGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~~----~~~fD~i~~d~ 230 (328)
.+..||++|+|+|......... .....+++.++..++.+.++-.. .-.++++..++..+.... -..||.|+.|.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 5578999999999854333333 45678888999988887664211 112378888887665443 35799999987
Q ss_pred Cc-----c----chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEe
Q 020270 231 YG-----E----YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPL 292 (328)
Q Consensus 231 f~-----e----~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~ 292 (328)
-. . ......+++..+.++|+|||++.+.+.-..... +.+...++..+.+.|..++..+.
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~i~~~~~~~g~~~~~i~~ 355 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTE---PLFYAMVAEAAQDAHRLLRVVEK 355 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCH---HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCH---HHHHHHHHHHHHHcCCeEEEEEc
Confidence 32 1 114456889999999999999998765444332 24556677778889977655543
No 296
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.21 E-value=0.00016 Score=57.25 Aligned_cols=101 Identities=18% Similarity=0.203 Sum_probs=67.7
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC----CCCCEEEEec-
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL----ESYDGIFFDT- 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~----~~fD~i~~d~- 230 (328)
....+|++|+|.|..........+- .++++.++++++.+.++-.....++++..+++.+..... .+||.|+.+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 5678999999999854433333333 888999999998877632111116788888876643321 3699999985
Q ss_pred CccchhhHHHHHHHHh--hccCCCcEEEEecc
Q 020270 231 YGEYYEDLREFHQHLP--KLLKPGGIYSYFNG 260 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~--~lL~~gG~~~~~~~ 260 (328)
|... ..++++.+. ++|+|||++.+.+.
T Consensus 120 ~~~~---~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 120 YAMD---LAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp TTSC---TTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred Cchh---HHHHHHHHHhhcccCCCcEEEEEeC
Confidence 3222 225666666 99999999986543
No 297
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.20 E-value=0.00046 Score=61.82 Aligned_cols=101 Identities=19% Similarity=0.180 Sum_probs=69.8
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+..||++|+|.|..............++++..+ +++.+.+.-. .....+++..+++.+.....+.||.|+.+...
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 35678999999999954433333344778888664 6665544211 12235888889888775445689999986531
Q ss_pred ---cchhhHHHHHHHHhhccCCCcEEE
Q 020270 233 ---EYYEDLREFHQHLPKLLKPGGIYS 256 (328)
Q Consensus 233 ---e~~~~l~~~~~~~~~lL~~gG~~~ 256 (328)
..-..+..++..+.++|+|||++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 122456689999999999999986
No 298
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.19 E-value=0.0011 Score=55.27 Aligned_cols=100 Identities=21% Similarity=0.230 Sum_probs=71.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
..+.+||++|+|.|.......... ....+++.++++++.+.+...... ++.+..++..+......+||.|+.+...++
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPYDRVVVWATAPT 146 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCEEEEEESSBBSS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccccCCCccEEEECCcHHH
Confidence 456789999999998443332222 578889999999998887643222 688888877663333467999998776554
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.. +++.++|+|||++.+..+-.
T Consensus 147 ~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 147 LL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CC------HHHHHTEEEEEEEEEEECSS
T ss_pred HH------HHHHHHcCCCcEEEEEEcCC
Confidence 43 46888999999999875533
No 299
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.19 E-value=0.0014 Score=59.09 Aligned_cols=96 Identities=18% Similarity=0.232 Sum_probs=67.3
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|.|.......... ....+..+- +.+++... ...++++..++..+.. ..||.|+....-.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~~~---~~~D~v~~~~~lh 278 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP-----PLSGIEHVGGDMFASV---PQGDAMILKAVCH 278 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTTCC---CCEEEEEEESSGG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-----hcCCCEEEeCCcccCC---CCCCEEEEecccc
Confidence 346789999999998544333333 344555555 77665332 2356888888765522 2389999877767
Q ss_pred chhhHH--HHHHHHhhccCCCcEEEEec
Q 020270 234 YYEDLR--EFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 234 ~~~~l~--~~~~~~~~lL~~gG~~~~~~ 259 (328)
+|.+.. .+++++.++|+|||++.+..
T Consensus 279 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 279 NWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 787665 99999999999999998763
No 300
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.18 E-value=0.00032 Score=56.41 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=70.5
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhccC----CCCCCEEEEe
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLSQ----LESYDGIFFD 229 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~----~~~fD~i~~d 229 (328)
....||++|+|.|...............+++.++++++.+.++-.. ...++++..+++.+.... ...||.|+.+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 5678999999999954433333345788899999998887653211 123578888887765432 3579999997
Q ss_pred cCccchhhHHHHHHHH--hhccCCCcEEEEec
Q 020270 230 TYGEYYEDLREFHQHL--PKLLKPGGIYSYFN 259 (328)
Q Consensus 230 ~f~e~~~~l~~~~~~~--~~lL~~gG~~~~~~ 259 (328)
.- -.......+++.+ .++|+|||++.+.+
T Consensus 124 ~~-~~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 124 PP-YAKQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp CC-GGGCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CC-CCchhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 53 1223344677776 88999999998643
No 301
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.17 E-value=0.0011 Score=56.59 Aligned_cols=105 Identities=14% Similarity=0.171 Sum_probs=73.4
Q ss_pred CCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCC---CC--CCeeEEecccchhcc-------CCCC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWG---EK--NNVKIIFGRWQDNLS-------QLES 222 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~---~~--~~~~~~~g~w~~~~~-------~~~~ 222 (328)
...+||++|+|.|.......... .....+++-++++++...++-.. .. .++.++.+++.+... ...+
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 45689999999999544333333 36788999999999998875432 22 247888888766532 2357
Q ss_pred CCEEEEec-Cc-----------------cchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 223 YDGIFFDT-YG-----------------EYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 223 fD~i~~d~-f~-----------------e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
||.|+.+. |. +....+..+++.+.++|+|||++.+...
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999972 21 0112356899999999999999997543
No 302
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.17 E-value=0.0017 Score=55.90 Aligned_cols=118 Identities=18% Similarity=0.217 Sum_probs=78.9
Q ss_pred cCCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
..+..||++|+|.|......... ......+++.+++.++.+.++-. ....++.+..+++.+.+. ...||.|+.|.
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~D~V~~~~ 189 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD-EKDVDALFLDV 189 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS-CCSEEEEEECC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc-CCccCEEEECC
Confidence 45678999999999844333222 23578888999999888776421 112357777777766532 24699999964
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
++.+ .+++++.++|+|||++.++..... . ...+...|++.||.
T Consensus 190 -~~~~----~~l~~~~~~L~pgG~l~~~~~~~~-------~-~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 190 -PDPW----NYIDKCWEALKGGGRFATVCPTTN-------Q-VQETLKKLQELPFI 232 (277)
T ss_dssp -SCGG----GTHHHHHHHEEEEEEEEEEESSHH-------H-HHHHHHHHHHSSEE
T ss_pred -cCHH----HHHHHHHHHcCCCCEEEEEeCCHH-------H-HHHHHHHHHHCCCc
Confidence 3332 788889999999999998764211 1 12233457789987
No 303
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.14 E-value=0.0029 Score=53.11 Aligned_cols=129 Identities=14% Similarity=0.056 Sum_probs=72.8
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEec-ccchhc-cCC--CCCCEEEEecC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFG-RWQDNL-SQL--ESYDGIFFDTY 231 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g-~w~~~~-~~~--~~fD~i~~d~f 231 (328)
.+..+|++|||+|..............++++-.+.+++...+.. ..+..... ...... ..+ ..||.+.+|..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v 112 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSD----ERVVVMEQFNFRNAVLADFEQGRPSFTSIDVS 112 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTC----TTEEEECSCCGGGCCGGGCCSCCCSEEEECCS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhC----ccccccccceEEEeCHhHcCcCCCCEEEEEEE
Confidence 35689999999998554333333347888888887777755532 11211111 111111 111 12677777654
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEecc------------ccCCcchhHHhhh-HHHHHHHHhcCCeEEEEE
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNG------------LCGGNAFFHVVYC-HLVSLELENLGFSMQLIP 291 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~------------~g~~~~~~~~~y~-~~~~~~l~~~G~~~~~~~ 291 (328)
-... ..++.++.++|+|||++.+... .|..+...+-.+. ..+...|+++||+++..+
T Consensus 113 ~~~l---~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 113 FISL---DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SSCG---GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred hhhH---HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 3333 4899999999999999998520 0111111111111 244557889999965444
No 304
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.14 E-value=0.003 Score=53.38 Aligned_cols=121 Identities=15% Similarity=0.108 Sum_probs=78.3
Q ss_pred CCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCC-------C--CCCCeeEEecccchhcc---CCCC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGW-------G--EKNNVKIIFGRWQDNLS---QLES 222 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~-------~--~~~~~~~~~g~w~~~~~---~~~~ 222 (328)
....+|++|||+|.......... ....++++..+.+++.+.+.-. . ...++.+..++..+.+. ...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 45679999999998544333333 3478899999988887754210 0 11468888888665332 2357
Q ss_pred CCEEEEecCccchhhH---------HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCC
Q 020270 223 YDGIFFDTYGEYYEDL---------REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGF 285 (328)
Q Consensus 223 fD~i~~d~f~e~~~~l---------~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~ 285 (328)
+|.|+.. ||..|..- ..+++++.++|+|||++.+.+. . +-|...+...+.+.|.
T Consensus 129 ~d~v~~~-~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td----~----~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 129 LSKMFFC-FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD----V----KDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEEE-SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES----C----HHHHHHHHHHHHHSTT
T ss_pred cCEEEEE-CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec----c----HHHHHHHHHHHHhCcC
Confidence 8888864 45554211 3899999999999999997432 1 1445555556777774
No 305
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.12 E-value=0.00067 Score=60.50 Aligned_cols=99 Identities=14% Similarity=0.161 Sum_probs=68.9
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
..+..||++|+|+|...............+++..+ +++.+.+. |+ ..++++..++..+.....+.||.|+.+.
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKL--EDTITLIKGKIEEVHLPVEKVDVIISEW 139 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTSCCSCSCEEEEEECC
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCC--CCcEEEEEeeHHHhcCCCCcEEEEEEcC
Confidence 45678999999999854333333334778888665 66665442 32 2468888888776544446799999876
Q ss_pred C---ccchhhHHHHHHHHhhccCCCcEEE
Q 020270 231 Y---GEYYEDLREFHQHLPKLLKPGGIYS 256 (328)
Q Consensus 231 f---~e~~~~l~~~~~~~~~lL~~gG~~~ 256 (328)
. ..+-.++..++..+.++|+|||++.
T Consensus 140 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 140 MGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred chhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 2 2233456689999999999999987
No 306
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.12 E-value=0.0013 Score=55.44 Aligned_cols=100 Identities=18% Similarity=0.199 Sum_probs=70.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+..+|++|+|.|......... .....+++.+++.++...++... ...++.+..+++.+.......||.|+.+.-
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~- 167 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR- 167 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS-
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc-
Confidence 45678999999999844333222 55788899999998888765321 224677777777664422357999998542
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
+ ...+++++.++|+|||++.+...
T Consensus 168 ~----~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 168 E----PWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp C----GGGGHHHHHHHBCTTCEEEEEES
T ss_pred C----HHHHHHHHHHHcCCCCEEEEEeC
Confidence 2 23778889999999999997654
No 307
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.12 E-value=0.00052 Score=62.03 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=71.1
Q ss_pred chHHHHHHHHhhcCCCceeeeccc------CCc-chhHHhcc-CCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccc
Q 020270 143 KPLMEAHAKAICSGGGHILNIGFG------MGL-VDTAIQQY-SPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQ 214 (328)
Q Consensus 143 tpL~~a~~~~~~~~~~~iLe~g~~------~g~-~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~ 214 (328)
+++.............+||++||| +|. ........ .....++++-++.+. . ...++++..++..
T Consensus 203 ~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~----~~~rI~fv~GDa~ 274 (419)
T 3sso_A 203 TPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----V----DELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----G----CBTTEEEEECCTT
T ss_pred HHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----h----cCCCcEEEEeccc
Confidence 344333333333456889999999 444 22222222 235677777666652 1 2457888888866
Q ss_pred hhccC------CCCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEe
Q 020270 215 DNLSQ------LESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 215 ~~~~~------~~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+.... .++||.|+.|.. -.+.+...+|++++++|||||+|.+-
T Consensus 275 dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 54322 367999998764 56677889999999999999999983
No 308
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.10 E-value=0.005 Score=53.04 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=73.1
Q ss_pred CCCceeeecccC---CcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhc-----------cCC
Q 020270 156 GGGHILNIGFGM---GLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNL-----------SQL 220 (328)
Q Consensus 156 ~~~~iLe~g~~~---g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~-----------~~~ 220 (328)
+...+|++|+|+ |......... .....++++..+.+++...+.- ....+++++.++..+.. ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALL-AKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH-TTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhc-CCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 457899999999 8743333222 2346677888899998877643 12356888888764321 122
Q ss_pred CCCCEEEEecCccchhh--HHHHHHHHhhccCCCcEEEEecccc
Q 020270 221 ESYDGIFFDTYGEYYED--LREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 221 ~~fD~i~~d~f~e~~~~--l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.+||.|+....-.++.+ ...+++++.++|+|||+|.+.....
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 47999987654444444 7899999999999999999765544
No 309
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.05 E-value=0.0007 Score=61.29 Aligned_cols=102 Identities=20% Similarity=0.150 Sum_probs=70.1
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+..||++|+|+|..............++++.+ .+++.+.+.- ......++++.++..+.... +.||.|+.+...
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 3567899999999985443333334477888876 6666554421 11234588888888776544 689999997632
Q ss_pred c---chhhHHHHHHHHhhccCCCcEEEEe
Q 020270 233 E---YYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 233 e---~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
. .-..+..++..+.++|+|||++.+.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 1 1134668999999999999999753
No 310
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.05 E-value=0.00013 Score=65.25 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=68.8
Q ss_pred CCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc-
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE- 233 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e- 233 (328)
...+||++|+|.|..........| ....+++.++.+++...++-.......++..++..+.. ..+||.|+.+.--.
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFHD 273 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCCS
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCccc
Confidence 456899999999995443333233 47788888888888776542111223455555544332 35799999865321
Q ss_pred ----chhhHHHHHHHHhhccCCCcEEEEec
Q 020270 234 ----YYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 234 ----~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
.+.+...+++++.++|+|||++.+..
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 34566799999999999999999753
No 311
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.05 E-value=0.0014 Score=64.25 Aligned_cols=128 Identities=21% Similarity=0.195 Sum_probs=86.8
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccC-CCCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQ-LESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~-~~~fD~i~~d 229 (328)
..+.+||++|+|+|..............++++.++..++.+.++ |.+ ..+++++.++..+.+.. -..||.|+.|
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~-~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT-GRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-STTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 35678999999999854332333445678889999998888764 221 13688888886664433 2579999998
Q ss_pred cCc-----------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 230 TYG-----------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 230 ~f~-----------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
.-. ....+.++++..+.++|+|||++.+.+........ ...|++.||. ++++..
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~---------~~~l~~~g~~--~~~i~~ 681 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---------LDGLAKLGLK--AQEITQ 681 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC---------HHHHHHTTEE--EEECTT
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC---------HHHHHHcCCc--eeeeee
Confidence 731 22345678899999999999999987665332222 2347788865 445544
No 312
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.05 E-value=0.0014 Score=57.58 Aligned_cols=103 Identities=14% Similarity=0.025 Sum_probs=70.4
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC--------CCCCeeEEecccchhc----c--CCC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG--------EKNNVKIIFGRWQDNL----S--QLE 221 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~--------~~~~~~~~~g~w~~~~----~--~~~ 221 (328)
...+||++|+|+|...............+++..+++++...+.... ...++.+..++..... . ...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 4578999999999854433333355788888999888877654211 1235677777766543 1 124
Q ss_pred CCCEEEEecCc----cchhhHHHHHHHHhhccCCCcEEEEe
Q 020270 222 SYDGIFFDTYG----EYYEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 222 ~fD~i~~d~f~----e~~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+||.|+....- ++.++...+++++.++|+|||++.+.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 79999885532 22245679999999999999999865
No 313
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.98 E-value=0.001 Score=60.36 Aligned_cols=129 Identities=12% Similarity=0.049 Sum_probs=88.0
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC--CCC-CeeEEecccchhccC----CCCCCEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG--EKN-NVKIIFGRWQDNLSQ----LESYDGIF 227 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~--~~~-~~~~~~g~w~~~~~~----~~~fD~i~ 227 (328)
..+..||++|+|+|..............++++.+++.++.+.++-.. ... ++++..++..+.+.. -..||.|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 45678999999999854433332344678888888888877654211 122 688888887665432 24799999
Q ss_pred EecCc---------cchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 228 FDTYG---------EYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 228 ~d~f~---------e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
.|.-. .....+++++..+.++|+|||++.+.+......+ +.+...++....++|..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~---~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTV---SQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCH---HHHHHHHHHHHTTCCCE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH---HHHHHHHHHHHHHcCCc
Confidence 98532 1123455678888999999999988765544432 35666777778889988
No 314
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.94 E-value=0.0028 Score=54.52 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=71.5
Q ss_pred cCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHcCCC----CCCCeeEEecccchhccCCCCCCEEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRTGWG----EKNNVKIIFGRWQDNLSQLESYDGIFF 228 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~g~~----~~~~~~~~~g~w~~~~~~~~~fD~i~~ 228 (328)
..+..||++|+|.|........ +.....++++.+++.++.+.++... ...++.+..++..+.......||.|+.
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE
Confidence 4567899999999984433322 2235788899999998888765211 124678888877665433457999999
Q ss_pred ecCccchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 229 DTYGEYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 229 d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
+. +..| ++++++.++|+|||++.++..
T Consensus 178 ~~-~~~~----~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 178 DM-LAPW----EVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp ES-SCGG----GGHHHHHHHEEEEEEEEEEES
T ss_pred CC-cCHH----HHHHHHHHhCCCCCEEEEEeC
Confidence 64 3333 788899999999999997654
No 315
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.93 E-value=0.017 Score=47.08 Aligned_cols=121 Identities=13% Similarity=0.109 Sum_probs=78.6
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
.+..+|++|+|.|...............+++.++.+++.+.++-.....++.+..+++.+.. ..||.|+.|.--..+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccc
Confidence 45789999999998544333333446888999999999888754222226888888877643 379999998642211
Q ss_pred --hhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEE
Q 020270 236 --EDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQL 289 (328)
Q Consensus 236 --~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~ 289 (328)
.....+++.+.+++ |+.++.... +. .....+...|++.||.++.
T Consensus 126 ~~~~~~~~l~~~~~~l--~~~~~~~~~----~~----~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DVVYSIHLA----KP----EVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp STTTTHHHHHHHHHHC--SEEEEEEEC----CH----HHHHHHHHHHHHTTEEEEE
T ss_pred cCCchHHHHHHHHHhc--CcEEEEEeC----Cc----CCHHHHHHHHHHCCCeEEE
Confidence 22347888888888 777664310 11 1122345568899988653
No 316
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.93 E-value=0.0022 Score=55.60 Aligned_cols=129 Identities=16% Similarity=0.051 Sum_probs=75.8
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEe-cccchhcc---CCCCCCEEEEecC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIF-GRWQDNLS---QLESYDGIFFDTY 231 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~-g~w~~~~~---~~~~fD~i~~d~f 231 (328)
.+..+|++|+|+|..............++++-.+.+++.-++.. +.+.... ........ ...+||.|..|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD----DRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC----TTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----cccceecccCceecchhhCCCCCCCEEEEEee
Confidence 45689999999998554333334456788887777777633321 2222221 11211111 1134999998765
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEe------cc------ccCCc-chhHHhhhHHHHHHHHhcCCeEEEEE
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYF------NG------LCGGN-AFFHVVYCHLVSLELENLGFSMQLIP 291 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~------~~------~g~~~-~~~~~~y~~~~~~~l~~~G~~~~~~~ 291 (328)
.. .+..++.++.++|+|||++.+. .+ .|..+ ...|..-..-+...+.++||.+.-..
T Consensus 161 f~---sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 161 FI---SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp SS---CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred Hh---hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 33 3458999999999999999985 11 12222 12222222345557889999965433
No 317
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=96.92 E-value=0.017 Score=47.98 Aligned_cols=127 Identities=10% Similarity=0.040 Sum_probs=86.6
Q ss_pred cCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
..+..++++|+|+|...-......| ..-++++-++..++...++-. .....+.+..+++.+.+..-..||.|+.-.-
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 4557899999999995443333333 456788899988888766421 1223578888887544433235999887443
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEee
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLP 293 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~ 293 (328)
.-..+.++++...+.|+++|+|..-... -...++..|.+.||.+.-+.+-
T Consensus 94 --Gg~~i~~Il~~~~~~L~~~~~lVlq~~~----------~~~~vr~~L~~~Gf~i~~e~lv 143 (225)
T 3kr9_A 94 --GGRLIARILEEGLGKLANVERLILQPNN----------REDDLRIWLQDHGFQIVAESIL 143 (225)
T ss_dssp --CHHHHHHHHHHTGGGCTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred --ChHHHHHHHHHHHHHhCCCCEEEEECCC----------CHHHHHHHHHHCCCEEEEEEEE
Confidence 2233669999999999999999963221 1336677899999998777653
No 318
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.92 E-value=0.0061 Score=51.99 Aligned_cols=94 Identities=18% Similarity=0.128 Sum_probs=68.5
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|.|.......... .....+++.++.+++...+.+ .++.+..+++.+......+||.|+....+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLPFSDTSMDAIIRIYAP- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCSBCTTCEEEEEEESCC-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCCCCCCceeEEEEeCCh-
Confidence 456789999999998544333332 347888999999999998865 34667777766554444679999974332
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEec
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
.+++++.++|+|||++.+..
T Consensus 159 ------~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 159 ------CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp ------CCHHHHHHHEEEEEEEEEEE
T ss_pred ------hhHHHHHHhcCCCcEEEEEE
Confidence 45788999999999998764
No 319
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.87 E-value=0.003 Score=53.47 Aligned_cols=116 Identities=19% Similarity=0.298 Sum_probs=79.2
Q ss_pred cCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCCCCCCEEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQLESYDGIFF 228 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~ 228 (328)
..+..||++|+|.|........ +.....++++.+++.++...++ |. ...+.+..+++.+... ..+||.|+.
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~-~~~~D~v~~ 168 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLKDIYEGIE-EENVDHVIL 168 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECSCGGGCCC-CCSEEEEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEECchhhccC-CCCcCEEEE
Confidence 4567899999999984433322 2245778889999988887764 32 2347888888775533 256999999
Q ss_pred ecCccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcC--Ce
Q 020270 229 DTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLG--FS 286 (328)
Q Consensus 229 d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G--~~ 286 (328)
|. +.. ..+++++.++|+|||++.++..... . .......|++.| |.
T Consensus 169 ~~-~~~----~~~l~~~~~~L~~gG~l~~~~~~~~-------~-~~~~~~~l~~~g~~f~ 215 (255)
T 3mb5_A 169 DL-PQP----ERVVEHAAKALKPGGFFVAYTPCSN-------Q-VMRLHEKLREFKDYFM 215 (255)
T ss_dssp CS-SCG----GGGHHHHHHHEEEEEEEEEEESSHH-------H-HHHHHHHHHHTGGGBS
T ss_pred CC-CCH----HHHHHHHHHHcCCCCEEEEEECCHH-------H-HHHHHHHHHHcCCCcc
Confidence 64 332 2788999999999999997642111 1 113344688899 87
No 320
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=96.86 E-value=0.0017 Score=52.42 Aligned_cols=132 Identities=10% Similarity=0.007 Sum_probs=83.4
Q ss_pred hcCCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCCCCC--CeeEEecccchhccCCCCCCEEEEec
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWGEKN--NVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~~~~--~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
.....+||++|||+|........ .....++++.-+..+++...++-..... ++.. .+..... .-..||.|..--
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~-~~~~~DvVLa~k 123 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV-YKGTYDVVFLLK 123 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH-TTSEEEEEEEET
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC-CCCCcChhhHhh
Confidence 35578999999999995544322 2233888899999999888765322122 3333 2222221 224589987644
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEec--cccCCcchhHHhhhHHHHHHHHhcCCeEE
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFN--GLCGGNAFFHVVYCHLVSLELENLGFSMQ 288 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~--~~g~~~~~~~~~y~~~~~~~l~~~G~~~~ 288 (328)
.-.+..+.+....++++.|+|||+|+.|- .+|+-.......|....+..+.+-+-.++
T Consensus 124 ~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~ 183 (200)
T 3fzg_A 124 MLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILD 183 (200)
T ss_dssp CHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEE
T ss_pred HHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeee
Confidence 32222555555568999999999999996 77776666666777777766655444443
No 321
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.86 E-value=0.0015 Score=57.18 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=62.7
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCC-------CeeEEeccc------chhc--cCCC
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKN-------NVKIIFGRW------QDNL--SQLE 221 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~-------~~~~~~g~w------~~~~--~~~~ 221 (328)
+.+||++|||+|..............++++..+++++...+.-..... .+....+.. .++. ...+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 578999999999632222222345788999999999888764211111 122322222 2111 1225
Q ss_pred CCCEEEEecCccch----hhHHHHHHHHhhccCCCcEEEEe
Q 020270 222 SYDGIFFDTYGEYY----EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 222 ~fD~i~~d~f~e~~----~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
+||+|..-. .-+| ++...+++++.++|||||+|.+.
T Consensus 129 ~FD~V~~~~-~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 129 KFNIIDWQF-AIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp CEEEEEEES-CGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECc-hHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 799997642 3333 34569999999999999999863
No 322
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.85 E-value=0.0034 Score=57.61 Aligned_cols=109 Identities=17% Similarity=0.169 Sum_probs=70.8
Q ss_pred cCCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHH-------HH----cCCCCCCCeeEEec-ccch---hcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERM-------LR----TGWGEKNNVKIIFG-RWQD---NLS 218 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L-------~~----~g~~~~~~~~~~~g-~w~~---~~~ 218 (328)
..+..||++|+|.|........ ......++++..++.++.. .+ .|.. ..++.+..+ .+.. +..
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEESSCSTTCHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEEcCcccccccccc
Confidence 4567899999999984432222 1234678889888776655 32 2311 135666654 2322 101
Q ss_pred CCCCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccCCc
Q 020270 219 QLESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN 265 (328)
Q Consensus 219 ~~~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~ 265 (328)
....||.|+...+. ...++..++.++.+.|+|||++.+...+++..
T Consensus 320 ~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 320 LIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp HGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred ccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 12469999986443 33677788999999999999999887666553
No 323
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.82 E-value=0.004 Score=57.67 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=81.4
Q ss_pred hcCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhcc-CCCCCCEE
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLS-QLESYDGI 226 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~-~~~~fD~i 226 (328)
...+.+||++|+|.|........ ......++++-++..++.+.++ |.. +.+..++..+... ....||.|
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~----v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP----LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC----CEEECSCHHHHHHHHCSCEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe----EEEEECCHHHhhhhccccCCEE
Confidence 35667899999999985443332 2234678899999988887664 421 6777777655442 23579999
Q ss_pred EEecCc----------cc---h---------hhHHHHHHHHhhccCCCcEEEEec-cccCCcchhHHhhhHHHHHHHHhc
Q 020270 227 FFDTYG----------EY---Y---------EDLREFHQHLPKLLKPGGIYSYFN-GLCGGNAFFHVVYCHLVSLELENL 283 (328)
Q Consensus 227 ~~d~f~----------e~---~---------~~l~~~~~~~~~lL~~gG~~~~~~-~~g~~~~~~~~~y~~~~~~~l~~~ 283 (328)
+.|+-. +. | ...+++++.+.++|+|||+++|.+ .+... -...+++..|++.
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~e------Ene~vv~~~l~~~ 248 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPE------ENEGVVAHFLKAH 248 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG------GTHHHHHHHHHHC
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchh------cCHHHHHHHHHHC
Confidence 998641 11 1 012688999999999999999753 33222 2234677778776
Q ss_pred -CCe
Q 020270 284 -GFS 286 (328)
Q Consensus 284 -G~~ 286 (328)
+|+
T Consensus 249 ~~~~ 252 (464)
T 3m6w_A 249 PEFR 252 (464)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 455
No 324
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.79 E-value=0.0011 Score=52.45 Aligned_cols=95 Identities=14% Similarity=0.116 Sum_probs=62.4
Q ss_pred cCCCceeeecccCCcchhHHhcc-C-CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhc--------cCCCCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY-S-PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNL--------SQLESYD 224 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~-~-~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~--------~~~~~fD 224 (328)
.....+|++|+|.|......... . .....+++.++ +++. .++.+..+++.+.. ....+||
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 45678999999999844333322 2 25677777555 4321 45777777765542 2235799
Q ss_pred EEEEecCccchhhH-----------HHHHHHHhhccCCCcEEEEec
Q 020270 225 GIFFDTYGEYYEDL-----------REFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 225 ~i~~d~f~e~~~~l-----------~~~~~~~~~lL~~gG~~~~~~ 259 (328)
.|+.+......... ..+++++.++|+|||++.+..
T Consensus 91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 99997643222111 588999999999999999643
No 325
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=96.78 E-value=0.021 Score=51.07 Aligned_cols=98 Identities=16% Similarity=0.272 Sum_probs=67.2
Q ss_pred cCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+|+++|+|.|..........| ...++.+. +.+++... ...++++..++..+. ...||.|+....-.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~~---~~~~D~v~~~~vlh 262 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT-----GNENLNFVGGDMFKS---IPSADAVLLKWVLH 262 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC-----CCSSEEEEECCTTTC---CCCCSEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc-----cCCCcEEEeCccCCC---CCCceEEEEccccc
Confidence 4567899999999985444333333 34555555 66654322 234588888876552 23599999877767
Q ss_pred chhhHH--HHHHHHhhccCC---CcEEEEeccc
Q 020270 234 YYEDLR--EFHQHLPKLLKP---GGIYSYFNGL 261 (328)
Q Consensus 234 ~~~~l~--~~~~~~~~lL~~---gG~~~~~~~~ 261 (328)
+|.+.. .+++++.++|+| ||++.+....
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 787644 999999999999 9999876433
No 326
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.75 E-value=0.00075 Score=56.19 Aligned_cols=100 Identities=19% Similarity=0.281 Sum_probs=68.4
Q ss_pred cCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHcCCCC------CCCeeEEecccchhccCCCCCCEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRTGWGE------KNNVKIIFGRWQDNLSQLESYDGI 226 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~g~~~------~~~~~~~~g~w~~~~~~~~~fD~i 226 (328)
....+||++|+|.|........ +......+++.++.+++.+.++.... ..++.+..++..........||.|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 4567899999999984432222 22247888999999888876532110 235777777765443334579999
Q ss_pred EEecCccchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 227 FFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 227 ~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
+.+.... .+++.+.++|+|||++.+..+
T Consensus 156 ~~~~~~~------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 156 HVGAAAP------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EECSBBS------SCCHHHHHTEEEEEEEEEEES
T ss_pred EECCchH------HHHHHHHHhcCCCcEEEEEEe
Confidence 9877644 345678899999999997644
No 327
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.75 E-value=0.00056 Score=57.02 Aligned_cols=100 Identities=19% Similarity=0.180 Sum_probs=69.0
Q ss_pred cCCCceeeecccCCcchhHHhcc------CCceEEeeccCHHHHHHHHHcCCCC------CCCeeEEecccchhc----c
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY------SPVTHTILEAHPEVYERMLRTGWGE------KNNVKIIFGRWQDNL----S 218 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~------~~~~~~a~e~~~~~~~~L~~~g~~~------~~~~~~~~g~w~~~~----~ 218 (328)
....+||++|+|.|......... .....++++.++++++...+..... ..++.+..++..... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 45678999999999844322222 2247888999999988876642111 245777777765543 3
Q ss_pred CCCCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 219 QLESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 219 ~~~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
....||.|+.+.... .+++.+.++|+|||++.+..+
T Consensus 159 ~~~~fD~I~~~~~~~------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASAS------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBS------SCCHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchH------HHHHHHHHhcCCCcEEEEEEc
Confidence 335799999877644 345778899999999997654
No 328
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=96.75 E-value=0.0035 Score=55.47 Aligned_cols=101 Identities=14% Similarity=0.135 Sum_probs=67.7
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecC-
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY- 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f- 231 (328)
..+..||++|+|+|..............++++.. .+++.+.+.- ......+++..++..+.....+.||.|+.+..
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 3567899999999985433333333467888866 4666554421 11234678888887765444467999998743
Q ss_pred --ccchhhHHHHHHHHhhccCCCcEEE
Q 020270 232 --GEYYEDLREFHQHLPKLLKPGGIYS 256 (328)
Q Consensus 232 --~e~~~~l~~~~~~~~~lL~~gG~~~ 256 (328)
-.+...+..++..+.++|+|||++.
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 2233456688999999999999996
No 329
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.70 E-value=0.0025 Score=56.97 Aligned_cols=98 Identities=21% Similarity=0.234 Sum_probs=67.1
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHH----cCCCCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLR----TGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~----~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
.+..||++|+|+|...............+++..+ +++.+.+ +|. ..++++..++..+.... +.||.|+....
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l--~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~ 125 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEVSLP-EQVDIIISEPM 125 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-SCEEEEEECCC
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCC--CCcEEEEEcchhhCCCC-CceeEEEEeCc
Confidence 4578999999999954433333334678888664 5555443 232 24688888887665322 57999999865
Q ss_pred ccch--hhHHHHHHHHhhccCCCcEEEE
Q 020270 232 GEYY--EDLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 232 ~e~~--~~l~~~~~~~~~lL~~gG~~~~ 257 (328)
..++ +.+.+.+.++.++|+|||++..
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 4433 4566888899999999999973
No 330
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.70 E-value=0.017 Score=53.44 Aligned_cols=125 Identities=16% Similarity=0.198 Sum_probs=80.5
Q ss_pred hcCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCC--CCCCE
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQL--ESYDG 225 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~--~~fD~ 225 (328)
...+..||++|+|.|........ ......++++.++..++.+.++ |. .++.+..++..+..... ..||.
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---KIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---CcEEEEEcChhhcchhhccCCCCE
Confidence 45667899999999984433332 2225788899999888877664 43 25777777766544322 46999
Q ss_pred EEEecCccc-----------h----hhH-------HHHHHHHhhccCCCcEEEEecc-ccCCcchhHHhhhHHHHHHHHh
Q 020270 226 IFFDTYGEY-----------Y----EDL-------REFHQHLPKLLKPGGIYSYFNG-LCGGNAFFHVVYCHLVSLELEN 282 (328)
Q Consensus 226 i~~d~f~e~-----------~----~~l-------~~~~~~~~~lL~~gG~~~~~~~-~g~~~~~~~~~y~~~~~~~l~~ 282 (328)
|+.|+-... | .++ ..+++++.++|+|||++++.+. +... -...+++..|++
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~------ene~~v~~~l~~ 407 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE------ENEKNIRWFLNV 407 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG------GTHHHHHHHHHH
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh------hHHHHHHHHHHh
Confidence 999853110 1 011 5789999999999999997533 2221 122355566776
Q ss_pred c-CCeE
Q 020270 283 L-GFSM 287 (328)
Q Consensus 283 ~-G~~~ 287 (328)
. ||.+
T Consensus 408 ~~~~~~ 413 (450)
T 2yxl_A 408 HPEFKL 413 (450)
T ss_dssp CSSCEE
T ss_pred CCCCEE
Confidence 5 6763
No 331
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.69 E-value=0.0044 Score=57.28 Aligned_cols=124 Identities=16% Similarity=0.110 Sum_probs=82.1
Q ss_pred hcCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhcc-CCCCCCEE
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLS-QLESYDGI 226 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~-~~~~fD~i 226 (328)
...+..||++|+|.|........ ......++++-++..++.+.++ |. .++.+..++...... ....||.|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhhccccCCEE
Confidence 45677899999999984432222 2334678889999888877653 43 257777777655432 12579999
Q ss_pred EEecCc----------c--------ch----hhHHHHHHHHhhccCCCcEEEEec-cccCCcchhHHhhhHHHHHHHHhc
Q 020270 227 FFDTYG----------E--------YY----EDLREFHQHLPKLLKPGGIYSYFN-GLCGGNAFFHVVYCHLVSLELENL 283 (328)
Q Consensus 227 ~~d~f~----------e--------~~----~~l~~~~~~~~~lL~~gG~~~~~~-~~g~~~~~~~~~y~~~~~~~l~~~ 283 (328)
+.|+-. + .. ...+++++.+.++|+|||+++|.+ .+... -...+++..|++.
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e------Ene~vv~~~l~~~ 253 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE------ENEEIISWLVENY 253 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG------GTHHHHHHHHHHS
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc------cCHHHHHHHHHhC
Confidence 999741 0 00 112478889999999999999753 32221 2244788889998
Q ss_pred CCe
Q 020270 284 GFS 286 (328)
Q Consensus 284 G~~ 286 (328)
||.
T Consensus 254 ~~~ 256 (456)
T 3m4x_A 254 PVT 256 (456)
T ss_dssp SEE
T ss_pred CCE
Confidence 854
No 332
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.64 E-value=0.0015 Score=54.84 Aligned_cols=100 Identities=9% Similarity=0.056 Sum_probs=70.0
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC--CCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE--KNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~--~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
.+..||++|+|+|.......... ...++++-++.+++.+.++-... ..++.+..+++.+.. ...+||.|+.+.--.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 56889999999998543333322 67788999999998876542111 136888888877765 335799999986544
Q ss_pred chhhHHHHHHHHhhccCCCcEEEE
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~ 257 (328)
+.......+.++.++|+|||++.+
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred CcchhhhHHHHHHhhcCCcceeHH
Confidence 444433456678899999998653
No 333
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.63 E-value=0.0052 Score=54.59 Aligned_cols=99 Identities=11% Similarity=0.150 Sum_probs=72.7
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
..+..+|++|+|+|..... .. .....++++.++..++.+.++-.. ...++++..++..+.. ..||.|+.|.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 4667899999999985544 33 456788899999999888764211 1236888888877665 679999998532
Q ss_pred cchhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 233 EYYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 233 e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
+.. ++++.+.++|+|||++.+++...
T Consensus 269 --~~~--~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 --FAH--KFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp --TGG--GGHHHHHHHEEEEEEEEEEEEES
T ss_pred --hHH--HHHHHHHHHcCCCCEEEEEEeec
Confidence 222 78899999999999998764433
No 334
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.61 E-value=0.00065 Score=56.71 Aligned_cols=101 Identities=19% Similarity=0.227 Sum_probs=68.0
Q ss_pred cCCCceeeecccCCcchhHHhccCC-------ceEEeeccCHHHHHHHHHcCCCC------CCCeeEEecccchhccCCC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSP-------VTHTILEAHPEVYERMLRTGWGE------KNNVKIIFGRWQDNLSQLE 221 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~-------~~~~a~e~~~~~~~~L~~~g~~~------~~~~~~~~g~w~~~~~~~~ 221 (328)
..+.+||++|+|.|........... ...++++.++++++...++.... ..++.+..++.........
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 162 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNA 162 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGC
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCC
Confidence 4567899999999984332222111 37888999999888876542111 2357777777655333335
Q ss_pred CCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccc
Q 020270 222 SYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGL 261 (328)
Q Consensus 222 ~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~ 261 (328)
.||.|+.+....+ +.+++.+.|+|||++.+..+-
T Consensus 163 ~fD~I~~~~~~~~------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 163 PYNAIHVGAAAPD------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SEEEEEECSCBSS------CCHHHHHTEEEEEEEEEEESC
T ss_pred CccEEEECCchHH------HHHHHHHHhcCCCEEEEEEec
Confidence 7999998776543 346788899999999976543
No 335
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.59 E-value=0.002 Score=53.00 Aligned_cols=102 Identities=26% Similarity=0.283 Sum_probs=68.2
Q ss_pred cCCCceeeecccCCcchhHHhc-c-CCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ-Y-SPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~-~-~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
....+||++|+|.|........ . .....++++.++++++...+..... ..++.+..++..........||.|+.+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAA 155 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCc
Confidence 4567899999999984332222 2 2257888999999888876642110 12477777776443333457999998766
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
..+.. +++.++|+|||++.+..+-+
T Consensus 156 ~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 156 GPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp BSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred hHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 55433 47889999999999875544
No 336
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.59 E-value=0.031 Score=45.19 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=74.7
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccch
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEYY 235 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~~ 235 (328)
.+..||++|+|.|...............+++.++++++...++-. ++++..++..+.. ..||.|+.+.--.++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEIS---GKYDTWIMNPPFGSV 123 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGCC---CCEEEEEECCCC---
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHCC---CCeeEEEECCCchhc
Confidence 567899999999985443333333468889999999999887542 6778888876642 579999998653333
Q ss_pred h--hHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEE
Q 020270 236 E--DLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQL 289 (328)
Q Consensus 236 ~--~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~ 289 (328)
. ..+.+++++.+++ |++++..+. + + .......+++.| .++.
T Consensus 124 ~~~~~~~~l~~~~~~~--g~~~~~~~~-~--------~-~~~~~~~~~~~g-~~~~ 166 (200)
T 1ne2_A 124 VKHSDRAFIDKAFETS--MWIYSIGNA-K--------A-RDFLRREFSARG-DVFR 166 (200)
T ss_dssp ----CHHHHHHHHHHE--EEEEEEEEG-G--------G-HHHHHHHHHHHE-EEEE
T ss_pred cCchhHHHHHHHHHhc--CcEEEEEcC-c--------h-HHHHHHHHHHCC-CEEE
Confidence 2 1247888888888 666664422 1 1 123444677888 6544
No 337
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.57 E-value=0.0007 Score=57.52 Aligned_cols=139 Identities=9% Similarity=0.060 Sum_probs=74.7
Q ss_pred CCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccch----hccC--CCCCCEE
Q 020270 156 GGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQD----NLSQ--LESYDGI 226 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~----~~~~--~~~fD~i 226 (328)
...+||++|+|+|........ ......++++.++++++...++-. .....+++..++..+ .+.. ...||.|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 346899999999973322221 123577889999999888766421 122347888777443 2221 1479999
Q ss_pred EEec-Cc-cc-------------hhhHHHHHHHHhhccCCCcEEEEeccccCC-----cc--hhH---Hh-hh-HHHHHH
Q 020270 227 FFDT-YG-EY-------------YEDLREFHQHLPKLLKPGGIYSYFNGLCGG-----NA--FFH---VV-YC-HLVSLE 279 (328)
Q Consensus 227 ~~d~-f~-e~-------------~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~-----~~--~~~---~~-y~-~~~~~~ 279 (328)
+.+. |. .. +.....++..+.++|+|||.+.++..+... ++ .++ .. .. ..++..
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 224 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEE 224 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHH
Confidence 9973 21 00 111224566777788888877655321110 00 000 00 11 244557
Q ss_pred HHhcCCe-EEEEEeeC
Q 020270 280 LENLGFS-MQLIPLPV 294 (328)
Q Consensus 280 l~~~G~~-~~~~~~~~ 294 (328)
|+++||+ |+..++..
T Consensus 225 l~~~Gf~~v~~~~~~~ 240 (254)
T 2h00_A 225 LRIQGVPKVTYTEFCQ 240 (254)
T ss_dssp HHHTTCSEEEEEEEEE
T ss_pred HHHcCCCceEEEEEec
Confidence 8999997 66666554
No 338
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=96.57 E-value=0.068 Score=44.49 Aligned_cols=129 Identities=11% Similarity=0.035 Sum_probs=89.4
Q ss_pred hcCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEec
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
...+..++++|+|+|...-...... ...-++++-++..++...++-. .....+.+..|++.+.+..-+.||.|+.-.
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 3456789999999999544333333 3456788899988888766421 123468888888766655434699988744
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
-- -.-+.++++...+.|+++|+|..---. -...++.-|.+.||.+.-+.+-.
T Consensus 99 mG--g~lI~~IL~~~~~~l~~~~~lIlqp~~----------~~~~lr~~L~~~Gf~i~~E~lv~ 150 (230)
T 3lec_A 99 MG--GRLIADILNNDIDKLQHVKTLVLQPNN----------REDDLRKWLAANDFEIVAEDILT 150 (230)
T ss_dssp EC--HHHHHHHHHHTGGGGTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEEEEE
T ss_pred Cc--hHHHHHHHHHHHHHhCcCCEEEEECCC----------ChHHHHHHHHHCCCEEEEEEEEE
Confidence 32 244668999999999999999843211 13467778999999988877644
No 339
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.57 E-value=0.023 Score=52.98 Aligned_cols=122 Identities=16% Similarity=0.112 Sum_probs=80.4
Q ss_pred CCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhcc-CCCCCCEEEE
Q 020270 156 GGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLS-QLESYDGIFF 228 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~-~~~~fD~i~~ 228 (328)
.+.+||++|+|.|........ ......++++.++..++.+.++ |. .++.+..++...... ....||.|+.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCCHHHhhhhccccCCEEEE
Confidence 667899999999985443332 2235788899999988887664 42 257777777665443 2357999999
Q ss_pred ecC----------cc---chh---------hHHHHHHHHhhccCCCcEEEEecc-ccCCcchhHHhhhHHHHHHHHhcCC
Q 020270 229 DTY----------GE---YYE---------DLREFHQHLPKLLKPGGIYSYFNG-LCGGNAFFHVVYCHLVSLELENLGF 285 (328)
Q Consensus 229 d~f----------~e---~~~---------~l~~~~~~~~~lL~~gG~~~~~~~-~g~~~~~~~~~y~~~~~~~l~~~G~ 285 (328)
|+- |+ .|+ ..+++++++.++|||||++++.+. +... -...+++..|++.+-
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~------Ene~vv~~~l~~~~~ 267 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQE------ENEAVCLWLKETYPD 267 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSST------TTHHHHHHHHHHSTT
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcc------cCHHHHHHHHHHCCC
Confidence 853 11 121 124788899999999999997633 3222 112356667877764
Q ss_pred e
Q 020270 286 S 286 (328)
Q Consensus 286 ~ 286 (328)
.
T Consensus 268 ~ 268 (479)
T 2frx_A 268 A 268 (479)
T ss_dssp T
T ss_pred c
Confidence 3
No 340
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.51 E-value=0.011 Score=52.91 Aligned_cols=132 Identities=17% Similarity=0.139 Sum_probs=87.5
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC------CCC---CCCeeEEecccchhcc----CCCC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG------WGE---KNNVKIIFGRWQDNLS----QLES 222 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g------~~~---~~~~~~~~g~w~~~~~----~~~~ 222 (328)
..+++|-+|.|.|......-...+-....+|-.+++++...+.- +.. .++++++.++....+. .-..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 45789999999998655444455566778899999999987742 111 1457777777554443 2246
Q ss_pred CCEEEEecCcc------------chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEE
Q 020270 223 YDGIFFDTYGE------------YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLI 290 (328)
Q Consensus 223 fD~i~~d~f~e------------~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~ 290 (328)
||+|..|.+.. .|+ ++||+.+.+.|+|||++++-.+-- .+.+.+ ......|+++...|.+.
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft--~eFy~~~~~~L~p~GVlv~Q~~s~----~~~~~~-~~i~~tl~~vF~~v~~~ 357 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFL--RLILDLSMKVLKQDGKYFTQGNCV----NLTEAL-SLYEEQLGRLYCPVEFS 357 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHH--HHHHHHHHHTEEEEEEEEEEEEET----TCHHHH-HHHHHHHTTSSSCEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHH--HHHHHHHHHhcCCCCEEEEecCCC----cchhHH-HHHHHHHHHhCCcceEe
Confidence 99999997621 122 599999999999999998643321 112222 23455688876667654
Q ss_pred E--eeC
Q 020270 291 P--LPV 294 (328)
Q Consensus 291 ~--~~~ 294 (328)
. +.|
T Consensus 358 ~~~~~V 363 (381)
T 3c6k_A 358 KEIVCV 363 (381)
T ss_dssp EEEECC
T ss_pred eEEEEe
Confidence 4 445
No 341
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.49 E-value=0.0048 Score=54.70 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=69.2
Q ss_pred hcCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHcCCC------------CCCCeeEEecccchhccC
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRTGWG------------EKNNVKIIFGRWQDNLSQ 219 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~g~~------------~~~~~~~~~g~w~~~~~~ 219 (328)
...+.+||++|+|.|........ +.....++++.+++.++...++... ...++.+..++..+....
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 35567899999999984433322 2236788899999988887764210 124678888876654322
Q ss_pred C--CCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 220 L--ESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 220 ~--~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
+ ..||.|+.|.. ..+ .+++++.++|+|||++.++..
T Consensus 183 ~~~~~fD~V~~~~~-~~~----~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 183 IKSLTFDAVALDML-NPH----VTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -----EEEEEECSS-STT----TTHHHHGGGEEEEEEEEEEES
T ss_pred cCCCCeeEEEECCC-CHH----HHHHHHHHhcCCCcEEEEEeC
Confidence 2 46999999754 322 478899999999999997654
No 342
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=96.47 E-value=0.0036 Score=52.40 Aligned_cols=102 Identities=25% Similarity=0.247 Sum_probs=66.5
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....+||++|+|.|..........+...++++.++++++...+..... ..++.+..++..........||.|+.+....
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAP 169 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBS
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCcHH
Confidence 456789999999998443322222256788888998888776642111 1247777777533222223599999876655
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.+. +.+.+.|+|||++.+..+-+
T Consensus 170 ~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 170 KIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp SCC------HHHHHTEEEEEEEEEEECSS
T ss_pred HHH------HHHHHhcCCCcEEEEEEecC
Confidence 433 46788999999999765543
No 343
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=96.42 E-value=0.061 Score=45.21 Aligned_cols=129 Identities=9% Similarity=-0.022 Sum_probs=87.9
Q ss_pred hcCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEec
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
...+..|+++|+|+|...-......+ ..-++++-++..++...++-. .....+.+..+++.+.+..-..||.|..-.
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 34567899999999995443333333 467788899988888776521 123357888888766554433599988743
Q ss_pred CccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 231 YGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
- .-.-+.++++...+.|+++++|..-.-.+ ...++.-|.+.||.+.-+.+-.
T Consensus 99 m--Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~----------~~~lr~~L~~~Gf~i~~E~lv~ 150 (244)
T 3gnl_A 99 M--GGTLIRTILEEGAAKLAGVTKLILQPNIA----------AWQLREWSEQNNWLITSEAILR 150 (244)
T ss_dssp E--CHHHHHHHHHHTGGGGTTCCEEEEEESSC----------HHHHHHHHHHHTEEEEEEEEEE
T ss_pred C--chHHHHHHHHHHHHHhCCCCEEEEEcCCC----------hHHHHHHHHHCCCEEEEEEEEE
Confidence 3 22346689999999999999998542211 3366778999999986655443
No 344
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.41 E-value=0.012 Score=52.60 Aligned_cols=122 Identities=15% Similarity=0.093 Sum_probs=82.3
Q ss_pred cCCCceeeecccCCcchhHH-h-ccCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAI-Q-QYSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~-~-~~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
.....+|+.|||.|...... . ........+++.++.+++...++- +... .+++..++..+.......||.|+.|.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCccccCCCCEEEECC
Confidence 45678999999999843221 1 213456788999999998877642 1122 68888888888766666799999985
Q ss_pred C-cc------ch-hhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEE
Q 020270 231 Y-GE------YY-EDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQL 289 (328)
Q Consensus 231 f-~e------~~-~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~ 289 (328)
- .+ .. ...+.+++++.++|+|||++.+.+.- ....+..++ .||.+..
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~-----------~~~~~~~~~-~g~~~~~ 335 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR-----------PALLKRALP-PGFALRH 335 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC-----------HHHHHHHCC-TTEEEEE
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC-----------HHHHHHHhh-cCcEEEE
Confidence 3 21 11 12358888999999999999976441 123334455 8887543
No 345
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.41 E-value=0.014 Score=51.20 Aligned_cols=101 Identities=21% Similarity=0.147 Sum_probs=69.7
Q ss_pred cCCCceeeecccCCcchhHHh--ccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 155 SGGGHILNIGFGMGLVDTAIQ--QYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~--~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
..+.+||++|+|.|....... ........+++..+++++...+.-... ..++.+..++..+.......||.|+.+..
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVG 153 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCC
Confidence 456789999999998433222 222346888899999888876642111 12478888887765544467999999877
Q ss_pred ccchhhHHHHHHHHhhccCCCcEEEEeccc
Q 020270 232 GEYYEDLREFHQHLPKLLKPGGIYSYFNGL 261 (328)
Q Consensus 232 ~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~ 261 (328)
.++.. +.+.++|+|||++.+..+-
T Consensus 154 ~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 154 VDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred HHHHH------HHHHHhcCCCcEEEEEECC
Confidence 66543 5678899999999986543
No 346
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.23 E-value=0.027 Score=50.69 Aligned_cols=124 Identities=16% Similarity=0.107 Sum_probs=80.4
Q ss_pred hcCCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhccCCCCCCEEEEec
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLSQLESYDGIFFDT 230 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~~~~fD~i~~d~ 230 (328)
...+..+|+.|||+|......... .....++++.++.+++...++-.. ....+++..++..+......+||.|+.|.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 356778999999999843322222 223678899999999887764211 12367888888877665557899999985
Q ss_pred C-cc------chhhH-HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEE
Q 020270 231 Y-GE------YYEDL-REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLI 290 (328)
Q Consensus 231 f-~e------~~~~l-~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~ 290 (328)
- .+ ...++ +++++.+.++| +|.+.+... .....+..+...||.+.-.
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-----------~~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-----------EKKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-----------CHHHHHHHHHHTTEEEEEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-----------CHHHHHHHHHHcCCEEEEE
Confidence 3 21 22222 57778888888 555554432 1234556788999996543
No 347
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.23 E-value=0.035 Score=47.94 Aligned_cols=104 Identities=15% Similarity=0.236 Sum_probs=71.0
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCC---CEEEEec
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESY---DGIFFDT 230 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~f---D~i~~d~ 230 (328)
...+||++|+|.|..............++++-+++.++...++-. .....+++..++|.+... ..| |.|+.+.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~--~~f~~~D~IvsnP 200 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK--EKFASIEMILSNP 200 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG--GGTTTCCEEEECC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc--cccCCCCEEEEcC
Confidence 456899999999995433332234577888999999888776421 112348888898877543 368 9999973
Q ss_pred C--c-------c-chhhH---------HHHHHHHh-hccCCCcEEEEeccc
Q 020270 231 Y--G-------E-YYEDL---------REFHQHLP-KLLKPGGIYSYFNGL 261 (328)
Q Consensus 231 f--~-------e-~~~~l---------~~~~~~~~-~lL~~gG~~~~~~~~ 261 (328)
- + + .|+.. ..+++++. +.++|||++.+-.+.
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 1 0 0 01111 17899999 999999999986654
No 348
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.13 E-value=0.0047 Score=57.66 Aligned_cols=100 Identities=21% Similarity=0.193 Sum_probs=67.1
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
....||++|+|.|...............+++..+ +++.+.+.- .....++++..+++.+.... +.||.|+.+..-.
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 235 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchH
Confidence 4578999999999854433333334677888666 665554321 11234688888888764322 4799999865423
Q ss_pred ch--hhHHHHHHHHhhccCCCcEEEE
Q 020270 234 YY--EDLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 234 ~~--~~l~~~~~~~~~lL~~gG~~~~ 257 (328)
++ +++.+.+.++.++|+|||++..
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 33 4556788899999999999974
No 349
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.13 E-value=0.0082 Score=52.05 Aligned_cols=110 Identities=13% Similarity=0.049 Sum_probs=68.1
Q ss_pred cCCCceeeecccC------CcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCCCCCCeeE-EecccchhccCCCCCCEE
Q 020270 155 SGGGHILNIGFGM------GLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWGEKNNVKI-IFGRWQDNLSQLESYDGI 226 (328)
Q Consensus 155 ~~~~~iLe~g~~~------g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~-~~g~w~~~~~~~~~fD~i 226 (328)
..+.+||++|+|. |. ...... ......++++-.+. + .++++ ..+++.+.... .+||.|
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~-v-----------~~v~~~i~gD~~~~~~~-~~fD~V 127 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF-V-----------SDADSTLIGDCATVHTA-NKWDLI 127 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC-B-----------CSSSEEEESCGGGCCCS-SCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC-C-----------CCCEEEEECccccCCcc-CcccEE
Confidence 4566899999943 43 111111 11245677775554 1 24667 88887764332 579999
Q ss_pred EEecCccc-----------hhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 227 FFDTYGEY-----------YEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 227 ~~d~f~e~-----------~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
+.|..+.. ...+..+++++.++|+|||+|.+....+.... .+...|++.||.
T Consensus 128 vsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~--------~l~~~l~~~GF~ 190 (290)
T 2xyq_A 128 ISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNA--------DLYKLMGHFSWW 190 (290)
T ss_dssp EECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCH--------HHHHHHTTEEEE
T ss_pred EEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHH--------HHHHHHHHcCCc
Confidence 99865321 12345889999999999999997433322211 233458888986
No 350
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.11 E-value=0.01 Score=53.46 Aligned_cols=101 Identities=11% Similarity=0.151 Sum_probs=67.6
Q ss_pred CCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCCCCCCEEEEecC
Q 020270 157 GGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY 231 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f 231 (328)
..+||++|||.|.......... .....+++.++.+++...++ |......+.+..++..+... ..+||.|+.+.-
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~-~~~fD~Ii~npp 301 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE-PFRFNAVLCNPP 301 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC-TTCEEEEEECCC
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC-CCCeeEEEECCC
Confidence 4789999999999544333333 45778899999988877653 32222346666666554322 247999998743
Q ss_pred ccc-----hhhHHHHHHHHhhccCCCcEEEEe
Q 020270 232 GEY-----YEDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 232 ~e~-----~~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
-.. .....++++++.+.|+|||++.+.
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 110 112337899999999999999975
No 351
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.07 E-value=0.016 Score=46.93 Aligned_cols=94 Identities=19% Similarity=0.124 Sum_probs=59.1
Q ss_pred cCCCceeeecccCCcchhHHhccC---CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhc--------------
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS---PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNL-------------- 217 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~---~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~-------------- 217 (328)
..+..||++|+|+|.......... ....++++-.+. . ...++.+..+++.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~-------~---~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM-------D---PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC-------C---CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc-------C---CCCCceEEEccccchhhhhhcccccccccc
Confidence 455789999999998544333332 256677774441 0 1235666666655432
Q ss_pred -----------cCCCCCCEEEEecCccc----hhhH-------HHHHHHHhhccCCCcEEEEe
Q 020270 218 -----------SQLESYDGIFFDTYGEY----YEDL-------REFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 218 -----------~~~~~fD~i~~d~f~e~----~~~l-------~~~~~~~~~lL~~gG~~~~~ 258 (328)
....+||.|+.+..+.. ..+. ..+++.+.++|+|||++.+-
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 12247999999764321 1121 24788899999999999863
No 352
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.00 E-value=0.0084 Score=55.14 Aligned_cols=128 Identities=16% Similarity=0.155 Sum_probs=75.9
Q ss_pred hcCCCceeeecccCCcchhHHhccCC-ceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhcc--CCCCCCEEEEec
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSP-VTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLS--QLESYDGIFFDT 230 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~-~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~--~~~~fD~i~~d~ 230 (328)
...+..||++|+|.|..........+ ...++++.++..++.+.++-......+.+..++..+... .-..||.|+.|+
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 35667899999999984433332222 577888877776666655310011235666666554431 124699999986
Q ss_pred Cccc-----------h----hh-------HHHHHHHHhhccCCCcEEEEec-cccCCcchhHHhhhHHHHHHHHh-cCCe
Q 020270 231 YGEY-----------Y----ED-------LREFHQHLPKLLKPGGIYSYFN-GLCGGNAFFHVVYCHLVSLELEN-LGFS 286 (328)
Q Consensus 231 f~e~-----------~----~~-------l~~~~~~~~~lL~~gG~~~~~~-~~g~~~~~~~~~y~~~~~~~l~~-~G~~ 286 (328)
-... | .+ ..++++++.++|+|||++++.+ .+... -...+++..|++ -+|.
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~------ene~~v~~~l~~~~~~~ 397 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE------ENSLQIKAFLQRTADAE 397 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG------GTHHHHHHHHHHCTTCE
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh------hHHHHHHHHHHhCCCCE
Confidence 3110 0 11 1488999999999999999753 33222 112345555655 4676
Q ss_pred E
Q 020270 287 M 287 (328)
Q Consensus 287 ~ 287 (328)
+
T Consensus 398 ~ 398 (429)
T 1sqg_A 398 L 398 (429)
T ss_dssp E
T ss_pred E
Confidence 4
No 353
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=95.95 E-value=0.021 Score=51.39 Aligned_cols=99 Identities=21% Similarity=0.260 Sum_probs=64.2
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCH--HHHHHHH-HcCCCCCCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHP--EVYERML-RTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~--~~~~~L~-~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
.++.||++|+|+|+..........-..++++..+ +.++.+. .+|+ ...++++.++.+++... +.||+|....+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~--~~~i~~i~~~~~~~~lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGL--EDRVHVLPGPVETVELP-EQVDAIVSEWMG 159 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-SCEEEEECCCCB
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCC--CceEEEEeeeeeeecCC-ccccEEEeeccc
Confidence 4678999999999954333333444677888553 3333333 3343 35688888887665433 579999875441
Q ss_pred --cch-hhHHHHHHHHhhccCCCcEEEE
Q 020270 233 --EYY-EDLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 233 --e~~-~~l~~~~~~~~~lL~~gG~~~~ 257 (328)
..+ ..+..++....++|+|||++..
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccchhhhHHHHHHhhCCCCceECC
Confidence 122 2455788888899999998863
No 354
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=95.85 E-value=0.014 Score=49.31 Aligned_cols=102 Identities=13% Similarity=0.007 Sum_probs=66.3
Q ss_pred CCCceeeecccCCcchhHHhcc---CCceEEeeccCHHHHHHHHHcCCCC---CC--C----------------------
Q 020270 156 GGGHILNIGFGMGLVDTAIQQY---SPVTHTILEAHPEVYERMLRTGWGE---KN--N---------------------- 205 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~---~~~~~~a~e~~~~~~~~L~~~g~~~---~~--~---------------------- 205 (328)
...+||++|+|+|......... .....++++-++.+++...++-... .. .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4568999999999843322222 2346778888998888776432111 00 1
Q ss_pred ---ee-------------EEecccchhcc-----CCCCCCEEEEecC---ccc------hhhHHHHHHHHhhccCCCcEE
Q 020270 206 ---VK-------------IIFGRWQDNLS-----QLESYDGIFFDTY---GEY------YEDLREFHQHLPKLLKPGGIY 255 (328)
Q Consensus 206 ---~~-------------~~~g~w~~~~~-----~~~~fD~i~~d~f---~e~------~~~l~~~~~~~~~lL~~gG~~ 255 (328)
+. +..+++.+... .-..||.|+.+.- ... ......+++++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 34 66666555432 2237999998752 122 245668999999999999999
Q ss_pred EE
Q 020270 256 SY 257 (328)
Q Consensus 256 ~~ 257 (328)
.+
T Consensus 211 ~~ 212 (250)
T 1o9g_A 211 AV 212 (250)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 355
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=95.82 E-value=0.023 Score=48.19 Aligned_cols=135 Identities=7% Similarity=-0.046 Sum_probs=84.9
Q ss_pred cCCCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
.....||++|||.|........ .....++++.-+..+++....+-........+...+.....+ -..||+++..---.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p-~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL-DEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC-CSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC-CCCcchHHHHHHHH
Confidence 3467899999999995443333 356688888889988888776532222334443333222111 14699986533322
Q ss_pred chhhH--HHHHHHHhhccCCCcEEEEecc--ccCCcchhHHhhhHHHHHHHHhcCCeEEEEE
Q 020270 234 YYEDL--REFHQHLPKLLKPGGIYSYFNG--LCGGNAFFHVVYCHLVSLELENLGFSMQLIP 291 (328)
Q Consensus 234 ~~~~l--~~~~~~~~~lL~~gG~~~~~~~--~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~ 291 (328)
+.++- ...| ++++.|+++|+++.|-- +|+-...+...|...-+..+.+.|-.++--+
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeee
Confidence 22221 1445 89999999999999844 8888788888999999999999998655444
No 356
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.79 E-value=0.015 Score=47.14 Aligned_cols=99 Identities=14% Similarity=0.093 Sum_probs=62.9
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhcc------CC-----CC
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLS------QL-----ES 222 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~------~~-----~~ 222 (328)
...+.+||++|+|+|......... ....++++-.+. ....++.++.++..+... .+ ..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEM----------EEIAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCC----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccc----------ccCCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 355688999999999855443333 445666664331 123467787777544210 00 27
Q ss_pred CCEEEEecCccc---h--------hhHHHHHHHHhhccCCCcEEEEeccccC
Q 020270 223 YDGIFFDTYGEY---Y--------EDLREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 223 fD~i~~d~f~e~---~--------~~l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
||.|..|..|.. + ......++.+.++|+|||+|.+....+.
T Consensus 92 ~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 92 VDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred ceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 999999976431 1 1124677789999999999996554444
No 357
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=95.62 E-value=0.16 Score=41.27 Aligned_cols=99 Identities=12% Similarity=-0.009 Sum_probs=61.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHH----cCCCCCCCeeEEecccchh--------------
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLR----TGWGEKNNVKIIFGRWQDN-------------- 216 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~----~g~~~~~~~~~~~g~w~~~-------------- 216 (328)
...+.|||+|.| ...........-..+++|.+++..+...+ +|.....++.++.|...+.
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred hCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 355899999975 42222222213578888888877666443 3431134567776663221
Q ss_pred ----c------cCCCCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 217 ----L------SQLESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 217 ----~------~~~~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
. .....||.||.|+-.. ...+..+.++|+|||++.+-|.
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k~-----~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRFR-----VGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSSH-----HHHHHHHHHHCSSCEEEEETTG
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCCc-----hhHHHHHHHhcCCCeEEEEeCC
Confidence 1 1125799999999532 1666667899999999986553
No 358
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.29 E-value=0.057 Score=43.26 Aligned_cols=96 Identities=16% Similarity=0.085 Sum_probs=58.5
Q ss_pred cCCCceeeecccCCcchhHHhccC-C---------ceEEeeccCHHHHHHHHHcCCCCCCCeeEE-ecccchhcc-----
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-P---------VTHTILEAHPEVYERMLRTGWGEKNNVKII-FGRWQDNLS----- 218 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~---------~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~-~g~w~~~~~----- 218 (328)
..+.+||++|+|+|.......... + ...++++..+. . ...+++.. .+++.....
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~-------~---~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI-------F---PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC-------C---CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc-------c---cCCCCeEEEeccCCCHHHHHHHH
Confidence 456789999999998443332221 1 46677774441 1 11345666 555433211
Q ss_pred ---CCCCCCEEEEecCcc---ch-hhH-------HHHHHHHhhccCCCcEEEEecc
Q 020270 219 ---QLESYDGIFFDTYGE---YY-EDL-------REFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 219 ---~~~~fD~i~~d~f~e---~~-~~l-------~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
.-.+||.|+.+..+. ++ .+. ..+++++.++|+|||++.+...
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 113699999876332 22 121 4788899999999999997543
No 359
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.29 E-value=0.029 Score=46.98 Aligned_cols=128 Identities=11% Similarity=-0.029 Sum_probs=75.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEE-ecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFF-DTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~-d~f~e 233 (328)
....+||++|||.|....... ....++++.-.+.+++.+................+.....+. ..+|.+.. ++.+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHH
Confidence 456789999999999655444 566888888999999888876332234444444443322222 36999855 44422
Q ss_pred chhhH--HHHHHHHhhccCCCcEEEEec--cccCCcchhHHhhhHHHHHHHHhcCCeE
Q 020270 234 YYEDL--REFHQHLPKLLKPGGIYSYFN--GLCGGNAFFHVVYCHLVSLELENLGFSM 287 (328)
Q Consensus 234 ~~~~l--~~~~~~~~~lL~~gG~~~~~~--~~g~~~~~~~~~y~~~~~~~l~~~G~~~ 287 (328)
.++. ...+ .+++.|+++++++.|- .+|+-...+...|....+..+.+.+-.+
T Consensus 181 -LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~ 236 (253)
T 3frh_A 181 -LEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIE 236 (253)
T ss_dssp -HHHHSTTHHH-HHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEE
T ss_pred -hhhhchhhHH-HHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhh
Confidence 1111 1333 7888999999999886 7777776777778777777765544333
No 360
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=94.75 E-value=0.047 Score=49.39 Aligned_cols=100 Identities=14% Similarity=0.010 Sum_probs=70.7
Q ss_pred CCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHcCCC--CCCC-eeEEecccchhcc-CC-CCCCEEEE
Q 020270 156 GGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRTGWG--EKNN-VKIIFGRWQDNLS-QL-ESYDGIFF 228 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~g~~--~~~~-~~~~~g~w~~~~~-~~-~~fD~i~~ 228 (328)
.+.++|++++|+|...-.... ......++++.+++.++.+.++-.. .... +++..++..+.+. .. ..||.|+.
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 467899999999984332222 2335678899999999888764211 1122 7888888766654 33 46999999
Q ss_pred ecCccchhhHHHHHHHHhhccCCCcEEEEec
Q 020270 229 DTYGEYYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 229 d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
|+|.. ..+|++.+.++|++||++.+.+
T Consensus 132 DP~g~----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DPFGT----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CCSSC----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcC----HHHHHHHHHHHhCCCCEEEEEe
Confidence 99532 2378999999999999887754
No 361
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=94.73 E-value=0.046 Score=49.25 Aligned_cols=100 Identities=15% Similarity=0.106 Sum_probs=69.0
Q ss_pred CCCceeeecccCCcchhHHhcc-CCceEEeeccCHHHHHHHHHcCCCC---------------C-CCeeEEecccchhcc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQY-SPVTHTILEAHPEVYERMLRTGWGE---------------K-NNVKIIFGRWQDNLS 218 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~~---------------~-~~~~~~~g~w~~~~~ 218 (328)
.+..+|++|+|+|+........ .....++++.+++.++.+.++-... . .++++..++......
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 5678999999999944322222 2345788889999988877641100 1 127788888666554
Q ss_pred CC-CCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEec
Q 020270 219 QL-ESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 219 ~~-~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
.. ..||.|+.|+|... .+|++.+.+.|++||++.+.+
T Consensus 127 ~~~~~fD~I~lDP~~~~----~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGSP----MEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSSCC----HHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCCCH----HHHHHHHHHhcCCCCEEEEEe
Confidence 33 46999999986321 288999999999999887643
No 362
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.44 E-value=0.19 Score=45.92 Aligned_cols=100 Identities=14% Similarity=0.087 Sum_probs=67.2
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
......+|++|+|+|......... .....+++..+++++.+.++-......+++..++..+.... .||.|+.|.-..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRA 364 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTT
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCcc
Confidence 456678999999999854433332 34678899999999888664211111278888887776544 799999987533
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEec
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
.... .+.+.+. .|+|+|++-+.+
T Consensus 365 g~~~--~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 365 GLHP--RLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CSCH--HHHHHHH-HHCCSEEEEEES
T ss_pred chHH--HHHHHHH-hcCCCcEEEEEC
Confidence 3332 4555554 489999887544
No 363
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=94.37 E-value=0.063 Score=48.87 Aligned_cols=117 Identities=19% Similarity=0.156 Sum_probs=71.7
Q ss_pred CCCceeeecccCCcchhHHhcc--CCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecC-c
Q 020270 156 GGGHILNIGFGMGLVDTAIQQY--SPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY-G 232 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~--~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f-~ 232 (328)
...+||+.|+|+|......... ......+++-+++.++.. .++.+..++..+... ...||.|..+.= .
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~ 109 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWAEGILADFLLWEP-GEAFDLILGNPPYG 109 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTEEEEESCGGGCCC-SSCEEEEEECCCCC
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCCcEEeCChhhcCc-cCCCCEEEECcCcc
Confidence 3568999999999944332221 235677888777666433 357777777655432 257999998631 0
Q ss_pred --cc-------h-hh------------------HHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcC
Q 020270 233 --EY-------Y-ED------------------LREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLG 284 (328)
Q Consensus 233 --e~-------~-~~------------------l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G 284 (328)
.. . .+ ...|++++.++|+|||++++...-+-... -+...++..|.+.|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~----~~~~~lr~~l~~~~ 185 (421)
T 2ih2_A 110 IVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVL----EDFALLREFLAREG 185 (421)
T ss_dssp CBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTC----GGGHHHHHHHHHHS
T ss_pred CcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcC----ccHHHHHHHHHhcC
Confidence 00 0 11 22678899999999999998654321111 12334555666667
Q ss_pred C
Q 020270 285 F 285 (328)
Q Consensus 285 ~ 285 (328)
+
T Consensus 186 ~ 186 (421)
T 2ih2_A 186 K 186 (421)
T ss_dssp E
T ss_pred C
Confidence 6
No 364
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=94.35 E-value=0.3 Score=41.97 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=62.9
Q ss_pred HHHHHHcCCCCCCCeeEEecccchhccCC--CCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhH
Q 020270 192 YERMLRTGWGEKNNVKIIFGRWQDNLSQL--ESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFH 269 (328)
Q Consensus 192 ~~~L~~~g~~~~~~~~~~~g~w~~~~~~~--~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~ 269 (328)
-+.+.+.|.. ..+++++.|...+.++.+ ..||.||.|+- .|+.-+.+++.+...|+|||++.+-+-.. ..
T Consensus 178 r~n~~~~gl~-~~~I~li~Gda~etL~~~~~~~~d~vfIDaD--~y~~~~~~Le~~~p~L~pGGiIv~DD~~~--~~--- 249 (282)
T 2wk1_A 178 RRNFRNYDLL-DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD--LYESTWDTLTNLYPKVSVGGYVIVDDYMM--CP--- 249 (282)
T ss_dssp HHHHHHTTCC-STTEEEEESCHHHHSTTCCCCCEEEEEECCC--SHHHHHHHHHHHGGGEEEEEEEEESSCTT--CH---
T ss_pred HHHHHHcCCC-cCceEEEEeCHHHHHhhCCCCCEEEEEEcCC--ccccHHHHHHHHHhhcCCCEEEEEcCCCC--CH---
Confidence 3445554531 357999999988777665 47999999985 56655689999999999999999766411 01
Q ss_pred HhhhHHHHHHHHhcCCeEEEEEee
Q 020270 270 VVYCHLVSLELENLGFSMQLIPLP 293 (328)
Q Consensus 270 ~~y~~~~~~~l~~~G~~~~~~~~~ 293 (328)
.+ ...++.-+++.|++++...+.
T Consensus 250 G~-~~Av~Ef~~~~~i~~~i~~~~ 272 (282)
T 2wk1_A 250 PC-KDAVDEYRAKFDIADELITID 272 (282)
T ss_dssp HH-HHHHHHHHHHTTCCSCCEECS
T ss_pred HH-HHHHHHHHHhcCCceEEEEec
Confidence 11 234444567788776555544
No 365
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=94.15 E-value=0.077 Score=45.50 Aligned_cols=103 Identities=16% Similarity=0.180 Sum_probs=66.4
Q ss_pred CCceeeecccCCc----chhHH--h-ccC--CceEEeeccCHHHHHHHHHcCCC-----------------------C--
Q 020270 157 GGHILNIGFGMGL----VDTAI--Q-QYS--PVTHTILEAHPEVYERMLRTGWG-----------------------E-- 202 (328)
Q Consensus 157 ~~~iLe~g~~~g~----~~~~~--~-~~~--~~~~~a~e~~~~~~~~L~~~g~~-----------------------~-- 202 (328)
..+|+++|||+|. ..... . +.. .....+..-.+++++...+.-+. .
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999996 11111 1 111 24678888999999988874210 0
Q ss_pred -------CCCeeEEecccchhccC-CCCCCEEEEecCccchh--hHHHHHHHHhhccCCCcEEEEec
Q 020270 203 -------KNNVKIIFGRWQDNLSQ-LESYDGIFFDTYGEYYE--DLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 203 -------~~~~~~~~g~w~~~~~~-~~~fD~i~~d~f~e~~~--~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
...+.+..+++.+.... ...||+|+.-..-.+++ ..+.+++++.+.|+|||.|.+-+
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 02466666666552112 35799999854323332 33689999999999999998633
No 366
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=94.01 E-value=0.022 Score=49.03 Aligned_cols=100 Identities=9% Similarity=-0.085 Sum_probs=57.5
Q ss_pred hhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC---CCCeeEE--ecccchhccCCCCCCEEE
Q 020270 153 ICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE---KNNVKII--FGRWQDNLSQLESYDGIF 227 (328)
Q Consensus 153 ~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~---~~~~~~~--~g~w~~~~~~~~~fD~i~ 227 (328)
....+..||++|+|+|......... ...++++..+ ++..+.+..... ..++.+. .++..++. ..+||.|+
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 3345678999999999854433333 3456666443 221111111000 0156666 66655533 35799999
Q ss_pred EecC--ccch-hh-H--HHHHHHHhhccCCCc--EEEE
Q 020270 228 FDTY--GEYY-ED-L--REFHQHLPKLLKPGG--IYSY 257 (328)
Q Consensus 228 ~d~f--~e~~-~~-l--~~~~~~~~~lL~~gG--~~~~ 257 (328)
.|.. ...+ .+ . ..+++.+.++|+||| .|.+
T Consensus 154 sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 154 CDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp ECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 9854 1122 11 1 136888999999999 8886
No 367
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=93.66 E-value=0.78 Score=41.93 Aligned_cols=127 Identities=15% Similarity=0.166 Sum_probs=78.2
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhccC----CCCCCEEEEe
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLSQ----LESYDGIFFD 229 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~~----~~~fD~i~~d 229 (328)
.....++++|+|.|......... .....+++..++.++...++-.. .-.++.+..+++.+.+.. ...||.|+.|
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 35578999999999955444333 45788899999999887664211 113688888888775433 2479999998
Q ss_pred cCccchhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEE-EEeeCC
Q 020270 230 TYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQL-IPLPVK 295 (328)
Q Consensus 230 ~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~-~~~~~~ 295 (328)
.--.... ++.+.+.. ++|++++-+.+.-. +..+-. ..|.+.||.++. ..++..
T Consensus 364 PPr~g~~---~~~~~l~~-~~p~~ivyvsc~p~--------tlard~-~~l~~~Gy~~~~~~~~d~F 417 (433)
T 1uwv_A 364 PARAGAA---GVMQQIIK-LEPIRIVYVSCNPA--------TLARDS-EALLKAGYTIARLAMLDMF 417 (433)
T ss_dssp CCTTCCH---HHHHHHHH-HCCSEEEEEESCHH--------HHHHHH-HHHHHTTCEEEEEEEECCS
T ss_pred CCCccHH---HHHHHHHh-cCCCeEEEEECChH--------HHHhhH-HHHHHCCcEEEEEEEeccC
Confidence 6432222 45555443 57776654322211 112211 246778999766 555553
No 368
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=93.61 E-value=0.047 Score=47.67 Aligned_cols=97 Identities=13% Similarity=0.064 Sum_probs=54.7
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeecc----CHHHHHHHHHcCCCC--CCCeeEEec-ccchhccCCCCCCEE
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEA----HPEVYERMLRTGWGE--KNNVKIIFG-RWQDNLSQLESYDGI 226 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~----~~~~~~~L~~~g~~~--~~~~~~~~g-~w~~~~~~~~~fD~i 226 (328)
...+..||++|||+|......... ....+++. .+..++.+ .... ..++.+..+ +..... ...||.|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V 152 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI---PMSTYGWNLVRLQSGVDVFFIP--PERCDTL 152 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC---CCCSTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH---HhhhcCCCCeEEEeccccccCC--cCCCCEE
Confidence 355678999999999854433332 12233322 11111100 0111 135667666 433322 2479999
Q ss_pred EEecCcc--ch-hhH---HHHHHHHhhccCCCcEEEE
Q 020270 227 FFDTYGE--YY-EDL---REFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 227 ~~d~f~e--~~-~~l---~~~~~~~~~lL~~gG~~~~ 257 (328)
+.|..+. ++ .+. ..++..+.++|+|||+|.+
T Consensus 153 ~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 153 LCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp EECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 9987542 22 111 1477888999999999986
No 369
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=93.58 E-value=0.23 Score=47.66 Aligned_cols=116 Identities=16% Similarity=0.190 Sum_probs=73.3
Q ss_pred hhhccchHHHHHHHHhhc-----CCCceeeecccCCcc-h----hHHhccCCceEEeeccCHHHHHH---HHHcCCCCCC
Q 020270 138 MMAWEKPLMEAHAKAICS-----GGGHILNIGFGMGLV-D----TAIQQYSPVTHTILEAHPEVYER---MLRTGWGEKN 204 (328)
Q Consensus 138 ~~~~~tpL~~a~~~~~~~-----~~~~iLe~g~~~g~~-~----~~~~~~~~~~~~a~e~~~~~~~~---L~~~g~~~~~ 204 (328)
...++.++..|...-... ....|+.+|+|+|+. . ....+......+|+|+++..... ...+||+ .
T Consensus 334 y~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~--d 411 (637)
T 4gqb_A 334 YSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWG--S 411 (637)
T ss_dssp HHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTG--G
T ss_pred HHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCC--C
Confidence 344566666665443211 224599999999983 1 12233455677899988743322 2335654 4
Q ss_pred CeeEEecccchhccCCCCCCEEEEecC--ccchhhHHHHHHHHhhccCCCcEEE
Q 020270 205 NVKIIFGRWQDNLSQLESYDGIFFDTY--GEYYEDLREFHQHLPKLLKPGGIYS 256 (328)
Q Consensus 205 ~~~~~~g~w~~~~~~~~~fD~i~~d~f--~e~~~~l~~~~~~~~~lL~~gG~~~ 256 (328)
.++++.|+-+++... +.+|+|...-. -..++.+.+.+...-+.|||||++-
T Consensus 412 kVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 412 QVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp GEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred eEEEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 588999987765433 56888877544 2344555578888889999999864
No 370
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=93.50 E-value=0.09 Score=44.83 Aligned_cols=101 Identities=12% Similarity=-0.037 Sum_probs=57.4
Q ss_pred HhhcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC---CCCeeEE--ecccchhccCCCCCCEE
Q 020270 152 AICSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE---KNNVKII--FGRWQDNLSQLESYDGI 226 (328)
Q Consensus 152 ~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~---~~~~~~~--~g~w~~~~~~~~~fD~i 226 (328)
.....+..||++|||+|......... ...++++..+ ++..+.+..... ..++.+. .++..++. ..+||.|
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 144 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVI 144 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEE
Confidence 34456778999999999854433333 3456665433 211111011000 0145666 56555432 2579999
Q ss_pred EEecC--ccchh-h-H--HHHHHHHhhccCCCc--EEEE
Q 020270 227 FFDTY--GEYYE-D-L--REFHQHLPKLLKPGG--IYSY 257 (328)
Q Consensus 227 ~~d~f--~e~~~-~-l--~~~~~~~~~lL~~gG--~~~~ 257 (328)
+.|.. ...+. + . ..+++.+.++|+||| .|.+
T Consensus 145 ~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 145 MCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 99854 22221 1 1 137888999999999 8886
No 371
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=93.35 E-value=0.12 Score=45.71 Aligned_cols=122 Identities=16% Similarity=0.103 Sum_probs=74.9
Q ss_pred CCCceeeecccCCcchhHHhcc------CCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCCCCCCE
Q 020270 156 GGGHILNIGFGMGLVDTAIQQY------SPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQLESYDG 225 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~------~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~~~fD~ 225 (328)
...+|++.|||+|......... .....++++-++..++....+ |. .+.+..++..... ....||.
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~----~~~i~~~D~l~~~-~~~~fD~ 204 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ----KMTLLHQDGLANL-LVDPVDV 204 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC----CCEEEESCTTSCC-CCCCEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC----CceEEECCCCCcc-ccCCccE
Confidence 4578999999999843222111 126778899999888776552 42 4566666643322 1256999
Q ss_pred EEEecCccchh-----------------hH-HHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 226 IFFDTYGEYYE-----------------DL-REFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 226 i~~d~f~e~~~-----------------~l-~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
|..+.--..+. +. ..|++++.+.|+|||++.+...-+- +.......++..|.+.|+-
T Consensus 205 Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~----~~~~~~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 205 VISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAM----FGTSDFAKVDKFIKKNGHI 279 (344)
T ss_dssp EEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGG----GGSTTHHHHHHHHHHHEEE
T ss_pred EEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchh----cCCchHHHHHHHHHhCCeE
Confidence 98875311110 11 2689999999999999998753321 1112234556667676653
No 372
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=93.27 E-value=0.4 Score=41.17 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=52.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC--CCCeeEEecccchhccCCCCCCEEEEecCc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE--KNNVKIIFGRWQDNLSQLESYDGIFFDTYG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~--~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~ 232 (328)
.....||++|+|+|.......... ....+++-.+++++.+.+.-... ..++++..++..+.. ...||.|+.+. |
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~--~~~fD~vv~nl-p 102 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD--LPFFDTCVANL-P 102 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC--CCCCSEEEEEC-C
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc--chhhcEEEEec-C
Confidence 345689999999999544333322 37889999999999887753221 246888888766542 23699998853 4
Q ss_pred cchh
Q 020270 233 EYYE 236 (328)
Q Consensus 233 e~~~ 236 (328)
-+|.
T Consensus 103 y~~~ 106 (285)
T 1zq9_A 103 YQIS 106 (285)
T ss_dssp GGGH
T ss_pred cccc
Confidence 4443
No 373
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=93.11 E-value=0.57 Score=40.00 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=66.6
Q ss_pred cCCCceeeecccCCc---chhHHhcc-CCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhc---cC---CCCC
Q 020270 155 SGGGHILNIGFGMGL---VDTAIQQY-SPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNL---SQ---LESY 223 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~---~~~~~~~~-~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~---~~---~~~f 223 (328)
.+...+|++|+|++. .....+.. .....+.+...+.|+....+.-.. ...++.++.++..+.. .. ...|
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 356789999999732 22211221 234566677899999876553211 1235777777765431 10 1234
Q ss_pred C-----EEEEecCccchhh---HHHHHHHHhhccCCCcEEEEeccccC
Q 020270 224 D-----GIFFDTYGEYYED---LREFHQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 224 D-----~i~~d~f~e~~~~---l~~~~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
| .|++...-.+..+ ...+++++.+.|+|||+|++.+....
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 4 4666554333333 46899999999999999997765443
No 374
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=92.74 E-value=0.97 Score=39.31 Aligned_cols=121 Identities=12% Similarity=0.021 Sum_probs=75.0
Q ss_pred hhcCCCceeeecccCCcchhHHhc--cCCceEEeeccCHHHHHHHHHc----CCCCCCCeeEEecccchhccCC---CCC
Q 020270 153 ICSGGGHILNIGFGMGLVDTAIQQ--YSPVTHTILEAHPEVYERMLRT----GWGEKNNVKIIFGRWQDNLSQL---ESY 223 (328)
Q Consensus 153 ~~~~~~~iLe~g~~~g~~~~~~~~--~~~~~~~a~e~~~~~~~~L~~~----g~~~~~~~~~~~g~w~~~~~~~---~~f 223 (328)
....+..||++++|.|........ ......++++.++..++.+.++ |. .++.+..+++.+..... ..|
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~---~~v~~~~~D~~~~~~~~~~~~~f 175 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV---SCCELAEEDFLAVSPSDPRYHEV 175 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGSCTTCGGGTTE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEeCChHhcCccccccCCC
Confidence 345677899999999984433222 2335678888999888877654 43 35788888776654322 469
Q ss_pred CEEEEecC----------cc-ch------hhH-------HHHHHHHhhccCCCcEEEEe-ccccCCcchhHHhhhHHHHH
Q 020270 224 DGIFFDTY----------GE-YY------EDL-------REFHQHLPKLLKPGGIYSYF-NGLCGGNAFFHVVYCHLVSL 278 (328)
Q Consensus 224 D~i~~d~f----------~e-~~------~~l-------~~~~~~~~~lL~~gG~~~~~-~~~g~~~~~~~~~y~~~~~~ 278 (328)
|.|+.|+- |+ .| +++ +++++.+.++++ ||+++|. |.+... -...+++.
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~------Ene~~v~~ 248 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQE------ENEDVVRD 248 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGG------GTHHHHHH
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChH------HhHHHHHH
Confidence 99999853 11 11 011 356777878776 9999975 333322 11235666
Q ss_pred HHHhc
Q 020270 279 ELENL 283 (328)
Q Consensus 279 ~l~~~ 283 (328)
.|++.
T Consensus 249 ~l~~~ 253 (309)
T 2b9e_A 249 ALQQN 253 (309)
T ss_dssp HHTTS
T ss_pred HHHhC
Confidence 67665
No 375
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=92.46 E-value=0.4 Score=40.10 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=44.2
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhcc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLS 218 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~ 218 (328)
.+..||++|+|+|.......... ...++++..+++++.+.+.-.. ..+++++.++..+...
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD-HDNFQVLNKDILQFKF 90 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT-CCSEEEECCCGGGCCC
T ss_pred CCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc-CCCeEEEEChHHhCCc
Confidence 45689999999999544333222 5788999999999999875422 3578888888776543
No 376
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=92.08 E-value=0.27 Score=46.81 Aligned_cols=107 Identities=10% Similarity=0.005 Sum_probs=68.5
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCC-CCCeeEEecccchhccC--CCCCCEEEEecCc
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGE-KNNVKIIFGRWQDNLSQ--LESYDGIFFDTYG 232 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~-~~~~~~~~g~w~~~~~~--~~~fD~i~~d~f~ 232 (328)
...+||++|||.|+........ -...+++...+..++....+.... ..++....++.+++... .+.||+|..-..-
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 3468999999999965544433 346788888888887766543222 24677778888776433 3579999988777
Q ss_pred cchhhHHHH--HHHHhhccCCCcEEEEeccccC
Q 020270 233 EYYEDLREF--HQHLPKLLKPGGIYSYFNGLCG 263 (328)
Q Consensus 233 e~~~~l~~~--~~~~~~lL~~gG~~~~~~~~g~ 263 (328)
||..+...+ ...++..|+++|..-.+...|+
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~ 177 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELAVK 177 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCT
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEeccc
Confidence 777654322 2234555666555444444444
No 377
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=92.06 E-value=0.5 Score=45.68 Aligned_cols=115 Identities=21% Similarity=0.167 Sum_probs=71.8
Q ss_pred hccchHHHHHHHHhh--cCCCceeeecccCCcchh----HHh-cc---------CCceEEeeccCHHHHHHH---HHcCC
Q 020270 140 AWEKPLMEAHAKAIC--SGGGHILNIGFGMGLVDT----AIQ-QY---------SPVTHTILEAHPEVYERM---LRTGW 200 (328)
Q Consensus 140 ~~~tpL~~a~~~~~~--~~~~~iLe~g~~~g~~~~----~~~-~~---------~~~~~~a~e~~~~~~~~L---~~~g~ 200 (328)
.++.++..+...... .....|+.+|+|+|+... +.. .+ .....+|+|.++..+..+ ..+||
T Consensus 391 ~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~ 470 (745)
T 3ua3_A 391 VYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTW 470 (745)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCC
Confidence 344555555333221 123569999999999421 111 12 456889999998554433 34566
Q ss_pred CCCCCeeEEecccchhccC-----CCCCCEEEEecCc--cchhhHHHHHHHHhhccCCCcEEE
Q 020270 201 GEKNNVKIIFGRWQDNLSQ-----LESYDGIFFDTYG--EYYEDLREFHQHLPKLLKPGGIYS 256 (328)
Q Consensus 201 ~~~~~~~~~~g~w~~~~~~-----~~~fD~i~~d~f~--e~~~~l~~~~~~~~~lL~~gG~~~ 256 (328)
. ..++++.|+-+++... .+..|.|...-.. ...+.+.+.++.+-+.|+|||++-
T Consensus 471 ~--d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 471 K--RRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp T--TCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred C--CeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 5 3488889987766442 3578998875441 122334577777888999999764
No 378
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=91.89 E-value=0.22 Score=44.60 Aligned_cols=97 Identities=15% Similarity=0.097 Sum_probs=64.3
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC-CCCCeeEEecccchhccCC---------------
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG-EKNNVKIIFGRWQDNLSQL--------------- 220 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~-~~~~~~~~~g~w~~~~~~~--------------- 220 (328)
+..++++++|+|........ .....++++.+++.++.+.++-.. .-.++++..++..+.....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 46799999999995443333 234678899999999887653211 1136888888866654321
Q ss_pred -CCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 221 -ESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 221 -~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
..||.|+.|.-.. .+..++.+.|+++|++.+.+.
T Consensus 293 ~~~fD~Vv~dPPr~------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 293 SYQCETIFVDPPRS------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GCCEEEEEECCCTT------CCCHHHHHHHTTSSEEEEEES
T ss_pred cCCCCEEEECcCcc------ccHHHHHHHHhCCCEEEEEEC
Confidence 2699999986422 123445666779999987643
No 379
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=90.81 E-value=1.2 Score=38.48 Aligned_cols=78 Identities=12% Similarity=0.140 Sum_probs=49.9
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCC-CCCCCeeEEecccchhccCCCCCCEEEEecCcc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGW-GEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGE 233 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~-~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e 233 (328)
..+..||++|+|.|......... .....+++..+++++.+.+.-. ....++++..++..+... ..||.|+.+. |-
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~~~D~Vv~n~-py 116 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF--PKFDVCTANI-PY 116 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--CCCSEEEEEC-CG
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--ccCCEEEEcC-Cc
Confidence 45678999999999955444333 3578899999999988876421 011467777777655432 4799999874 44
Q ss_pred chh
Q 020270 234 YYE 236 (328)
Q Consensus 234 ~~~ 236 (328)
++.
T Consensus 117 ~~~ 119 (299)
T 2h1r_A 117 KIS 119 (299)
T ss_dssp GGH
T ss_pred ccc
Confidence 443
No 380
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=88.56 E-value=1.6 Score=37.58 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=53.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCCCCEEEEecCccc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLESYDGIFFDTYGEY 234 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f~e~ 234 (328)
..+..|||+|+|+|......... ....+++|-.+++++.+.+.-. ...+++++.++..+.......||.|+.+ .|-+
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~~~~~~fD~Iv~N-lPy~ 125 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVDLNKLDFNKVVAN-LPYQ 125 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSCGGGSCCSEEEEE-CCGG
T ss_pred CCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCCcccCCccEEEEe-Cccc
Confidence 45678999999999854433332 4567889999988888876421 2346888888876644333469999876 3444
Q ss_pred hh
Q 020270 235 YE 236 (328)
Q Consensus 235 ~~ 236 (328)
++
T Consensus 126 is 127 (295)
T 3gru_A 126 IS 127 (295)
T ss_dssp GH
T ss_pred cc
Confidence 43
No 381
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=87.91 E-value=0.042 Score=46.18 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=59.1
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC-CCCCEEEEec-Cc
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL-ESYDGIFFDT-YG 232 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~-~~fD~i~~d~-f~ 232 (328)
..+..||++|+|.|.......... ....+++-.+++++.+.+.-. ...++++..++..+..... .+| .|..+. |.
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYH 104 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTTCCCSSEE-EEEEECCSS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcCcccCCCc-EEEEeCCcc
Confidence 355689999999999543332222 567888877777766544321 2346777778776654321 346 444442 21
Q ss_pred cchhhHHH----------HH----HHHhhccCCCcEEEEec
Q 020270 233 EYYEDLRE----------FH----QHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 233 e~~~~l~~----------~~----~~~~~lL~~gG~~~~~~ 259 (328)
..-..+.. ++ +.+.++|+|||++++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 105 LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 11111112 22 55788889998887543
No 382
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=86.51 E-value=0.9 Score=39.16 Aligned_cols=83 Identities=20% Similarity=0.279 Sum_probs=50.7
Q ss_pred CeeEEecccchhccCC--CCCCEEEEecCc---cc-------------h----hhHHHHHHHHhhccCCCcEEEEecccc
Q 020270 205 NVKIIFGRWQDNLSQL--ESYDGIFFDTYG---EY-------------Y----EDLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 205 ~~~~~~g~w~~~~~~~--~~fD~i~~d~f~---e~-------------~----~~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
..+++.|++.+.+..+ ++||+|+.|.-- .. + ..+..++.++.++|+|||.+.+..+-.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 4677788877765544 579999988531 01 1 124567788999999999998876632
Q ss_pred CCc-c-hh-HHh--hhHHHHHHHHhcCCeE
Q 020270 263 GGN-A-FF-HVV--YCHLVSLELENLGFSM 287 (328)
Q Consensus 263 ~~~-~-~~-~~~--y~~~~~~~l~~~G~~~ 287 (328)
... + .. +.+ +...+...++++||.+
T Consensus 101 ~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~ 130 (297)
T 2zig_A 101 AVARRRFGRHLVFPLHADIQVRCRKLGFDN 130 (297)
T ss_dssp EEECC----EEEECHHHHHHHHHHHTTCEE
T ss_pred ccccccCCcccccccHHHHHHHHHHcCCee
Confidence 210 0 00 001 1233445688999974
No 383
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=86.43 E-value=1.4 Score=39.93 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=51.8
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCC---CCCCeeEEecccchhccCC--CCCCEEEEecC
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWG---EKNNVKIIFGRWQDNLSQL--ESYDGIFFDTY 231 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~---~~~~~~~~~g~w~~~~~~~--~~fD~i~~d~f 231 (328)
+.+||++|+|+|......... ....++++.++.+++....+-.. .-.+++++.++..+.+... ..||.||.|.-
T Consensus 94 g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred CCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 678999999999854333333 34788899999999988765110 0146888888877654332 46999999864
No 384
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=85.31 E-value=0.93 Score=34.03 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=30.5
Q ss_pred CCCCEEEEecCcc-chhhH-HHHHHHHhhccCCCcEEEE
Q 020270 221 ESYDGIFFDTYGE-YYEDL-REFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 221 ~~fD~i~~d~f~e-~~~~l-~~~~~~~~~lL~~gG~~~~ 257 (328)
..||.|++-+-++ .+..+ +.++..+++.|||||.|.-
T Consensus 58 stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 58 AKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 5799999988766 43344 7999999999999999984
No 385
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=84.35 E-value=1.9 Score=37.25 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=53.6
Q ss_pred cCCCceeeecccCCcchhHHhccC-CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhcc---C--CCCCCEEEE
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS-PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLS---Q--LESYDGIFF 228 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~-~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~---~--~~~fD~i~~ 228 (328)
..+..+|++|+|.|.......... ....++++..+++++...++-.....++.+..+++.++.. . ...||.|++
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILM 104 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEE
Confidence 456789999999998544333322 3577889999999998877532212578889888776532 1 147999999
Q ss_pred ec
Q 020270 229 DT 230 (328)
Q Consensus 229 d~ 230 (328)
|.
T Consensus 105 D~ 106 (301)
T 1m6y_A 105 DL 106 (301)
T ss_dssp EC
T ss_pred cC
Confidence 87
No 386
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=84.24 E-value=8 Score=34.57 Aligned_cols=80 Identities=13% Similarity=0.065 Sum_probs=56.2
Q ss_pred ceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCCCCCCEEEEecC-ccc---hhhHHHHHHHHhhccCC--
Q 020270 180 VTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQLESYDGIFFDTY-GEY---YEDLREFHQHLPKLLKP-- 251 (328)
Q Consensus 180 ~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f-~e~---~~~l~~~~~~~~~lL~~-- 251 (328)
....+++.++.+++...++- +.....+++..++..+.... ..||.|+.|.= .+. -.++..++..+.+.|++
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 45788899999998877642 11223578888887765543 47999999853 222 25677888888888875
Q ss_pred CcEEEEecc
Q 020270 252 GGIYSYFNG 260 (328)
Q Consensus 252 gG~~~~~~~ 260 (328)
||++.++++
T Consensus 336 g~~~~iit~ 344 (384)
T 3ldg_A 336 TWSQFILTN 344 (384)
T ss_dssp TSEEEEEES
T ss_pred CcEEEEEEC
Confidence 888887766
No 387
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=83.90 E-value=0.89 Score=41.70 Aligned_cols=104 Identities=18% Similarity=0.189 Sum_probs=63.4
Q ss_pred cCCCceeeecccCCcchhHHhcc--------------CCceEEeeccCHHHHHHHHH----cCCCCCCCeeEEecccchh
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQY--------------SPVTHTILEAHPEVYERMLR----TGWGEKNNVKIIFGRWQDN 216 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~--------------~~~~~~a~e~~~~~~~~L~~----~g~~~~~~~~~~~g~w~~~ 216 (328)
..+.+|++.+||+|......... .....++++-++..++.... +|... ....+..++....
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~-~~~~i~~gD~l~~ 248 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT-DRSPIVCEDSLEK 248 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS-SCCSEEECCTTTS
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc-CCCCEeeCCCCCC
Confidence 34568999999999832211110 12457888888888776543 44321 1345555553322
Q ss_pred ccCCCCCCEEEEec-Cccchh----------------hHHHHHHHHhhccCCCcEEEEecc
Q 020270 217 LSQLESYDGIFFDT-YGEYYE----------------DLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 217 ~~~~~~fD~i~~d~-f~e~~~----------------~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
... ..||.|..+. |...+. .-..|++++.++|+|||++++...
T Consensus 249 ~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 249 EPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 211 3699998874 321111 012789999999999999987654
No 388
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=81.72 E-value=14 Score=30.72 Aligned_cols=59 Identities=15% Similarity=0.222 Sum_probs=44.4
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchh
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDN 216 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~ 216 (328)
..+..|||+|+|+|...............++|-++.+++.+.+. ...+++++.++..+.
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GDERLEVINEDASKF 88 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTC
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhC
Confidence 34678999999999855444443346789999999999999876 345788888886554
No 389
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=81.28 E-value=6 Score=35.51 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=54.5
Q ss_pred ceEEeeccCHHHHHHHHHcCC--CCCCCeeEEecccchhccCCCCCCEEEEecC-ccch---hhHHHHHHHHhhccCC--
Q 020270 180 VTHTILEAHPEVYERMLRTGW--GEKNNVKIIFGRWQDNLSQLESYDGIFFDTY-GEYY---EDLREFHQHLPKLLKP-- 251 (328)
Q Consensus 180 ~~~~a~e~~~~~~~~L~~~g~--~~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f-~e~~---~~l~~~~~~~~~lL~~-- 251 (328)
....+++.++.+++...++-. .....+++..++..+.... ..||.|..|.- -+.. .++.+++..+.+.|++
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~ 342 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMP 342 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCC
Confidence 457888899999988766421 1223577888887765543 47999999843 2222 3466778877777765
Q ss_pred CcEEEEecc
Q 020270 252 GGIYSYFNG 260 (328)
Q Consensus 252 gG~~~~~~~ 260 (328)
||++.++++
T Consensus 343 g~~~~iit~ 351 (393)
T 3k0b_A 343 TWSVYVLTS 351 (393)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 888887766
No 390
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=80.94 E-value=9.5 Score=33.74 Aligned_cols=118 Identities=15% Similarity=0.060 Sum_probs=68.9
Q ss_pred HHHHHHHhhcCCCceeeecccCCcchhHHh-ccCCceEEeeccCHHHHHHHHH----cCCCC---CCCeeEEecccchhc
Q 020270 146 MEAHAKAICSGGGHILNIGFGMGLVDTAIQ-QYSPVTHTILEAHPEVYERMLR----TGWGE---KNNVKIIFGRWQDNL 217 (328)
Q Consensus 146 ~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~-~~~~~~~~a~e~~~~~~~~L~~----~g~~~---~~~~~~~~g~w~~~~ 217 (328)
|+++.......+..||++.++.|-...... ....-..++.+.++.-++.|.+ .|... ..++.+...+.....
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~ 217 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG 217 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc
Confidence 334444455677899999999997433222 2222345677777655554433 34321 134555554433322
Q ss_pred c-CCCCCCEEEEecCcc------------c---hh--h-------HHHHHHHHhhccCCCcEEEEe-ccccC
Q 020270 218 S-QLESYDGIFFDTYGE------------Y---YE--D-------LREFHQHLPKLLKPGGIYSYF-NGLCG 263 (328)
Q Consensus 218 ~-~~~~fD~i~~d~f~e------------~---~~--~-------l~~~~~~~~~lL~~gG~~~~~-~~~g~ 263 (328)
. ....||.|..|+--. . |. + -++++..+.++|||||+++|. |.+-+
T Consensus 218 ~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 218 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 2 124699999997611 1 10 1 146777899999999999986 44443
No 391
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=79.67 E-value=11 Score=33.36 Aligned_cols=23 Identities=26% Similarity=0.294 Sum_probs=19.6
Q ss_pred hhHHHHHHHHhhccCCCcEEEEe
Q 020270 236 EDLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 236 ~~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
.|+..|++...+.|+|||++++-
T Consensus 186 ~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 186 EDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp HHHHHHHHHHHHHBCTTCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCceEEEE
Confidence 35678899999999999999864
No 392
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=77.31 E-value=1.1 Score=37.85 Aligned_cols=75 Identities=19% Similarity=0.291 Sum_probs=49.5
Q ss_pred CCCceeeecccCCcchhHHhccCCceEEeeccCH-------HHHHHHHHcCCC--CCCCeeEEecccchhccCC----CC
Q 020270 156 GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHP-------EVYERMLRTGWG--EKNNVKIIFGRWQDNLSQL----ES 222 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~-------~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~~----~~ 222 (328)
.+..+|++|+|+|......... ....++++.++ +.++...++-.. ....++++.++..+.+..+ .+
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 4578999999999843322222 23578899999 777666542100 1124888888877654422 47
Q ss_pred CCEEEEecC
Q 020270 223 YDGIFFDTY 231 (328)
Q Consensus 223 fD~i~~d~f 231 (328)
||.||+|..
T Consensus 162 fD~V~~dP~ 170 (258)
T 2r6z_A 162 PDIVYLDPM 170 (258)
T ss_dssp CSEEEECCC
T ss_pred ccEEEECCC
Confidence 999999975
No 393
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=76.62 E-value=6.4 Score=33.33 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=50.0
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccC-CCCCCEEEEec
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQ-LESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~-~~~fD~i~~d~ 230 (328)
..+ .|||+|+|+|.......... ...+++|-++++++.+.+.-. ..+++++.++..+.... ...+|.|..+.
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPWEEVPQGSLLVANL 118 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCGGGSCTTEEEEEEE
T ss_pred CCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCChhhccCccEEEecC
Confidence 445 99999999999554333332 568899999999999987543 25788988886654332 23577776653
No 394
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=76.51 E-value=7.6 Score=32.52 Aligned_cols=60 Identities=12% Similarity=0.114 Sum_probs=44.5
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchh
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDN 216 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~ 216 (328)
..+..|||+|+|+|.......... ...+++|-++++++.+.+.-.. ..+++++.++..+.
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQF 87 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTC
T ss_pred CCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhC
Confidence 456789999999999654443332 5789999999999999775322 45788888886654
No 395
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=76.00 E-value=4.2 Score=34.47 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=54.3
Q ss_pred HHHHHHHHhhcCCCceeeecccCCcchhHHhccCCceE-Eeec-cCHHHHHHHHHcCCCCCCCeeEEecccchhccCCCC
Q 020270 145 LMEAHAKAICSGGGHILNIGFGMGLVDTAIQQYSPVTH-TILE-AHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQLES 222 (328)
Q Consensus 145 L~~a~~~~~~~~~~~iLe~g~~~g~~~~~~~~~~~~~~-~a~e-~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~~~ 222 (328)
|..............+|++|++.|-.........+... .+.. + .++....+. +.....++....+..+.....-..
T Consensus 63 L~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG-vDl~~~pi~-~~~~g~~ii~~~~~~dv~~l~~~~ 140 (277)
T 3evf_A 63 LRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG-RDGHEKPMN-VQSLGWNIITFKDKTDIHRLEPVK 140 (277)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC-CTTCCCCCC-CCBTTGGGEEEECSCCTTTSCCCC
T ss_pred HHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEe-ccCcccccc-cCcCCCCeEEEeccceehhcCCCC
Confidence 33333334556667899999999985443222222211 1221 1 110000000 000000222222322211112257
Q ss_pred CCEEEEecCcc---chhh-HH--HHHHHHhhccCCC-cEEEE
Q 020270 223 YDGIFFDTYGE---YYED-LR--EFHQHLPKLLKPG-GIYSY 257 (328)
Q Consensus 223 fD~i~~d~f~e---~~~~-l~--~~~~~~~~lL~~g-G~~~~ 257 (328)
||.|..|-.|. .|.| .+ .+++.+.+.|+|| |.|++
T Consensus 141 ~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 141 CDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 99999998765 2322 22 3467888999999 99996
No 396
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=73.86 E-value=5.1 Score=34.88 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=48.7
Q ss_pred CeeEEecccchhccCC--CCCCEEEEecC-ccc------------h-hhHHHHHHHHhhccCCCcEEEEeccccCCc-ch
Q 020270 205 NVKIIFGRWQDNLSQL--ESYDGIFFDTY-GEY------------Y-EDLREFHQHLPKLLKPGGIYSYFNGLCGGN-AF 267 (328)
Q Consensus 205 ~~~~~~g~w~~~~~~~--~~fD~i~~d~f-~e~------------~-~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~-~~ 267 (328)
...++.|+-.+.+..+ ++||+||.|.- ... | ..+.+.+.++.++|+|||.+.+.++---.. ..
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~ 93 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVP 93 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCc
Confidence 4566667654444333 57999999864 111 1 246688889999999999999876632000 00
Q ss_pred hHHhh-hHHHHHHHHhcCCeE
Q 020270 268 FHVVY-CHLVSLELENLGFSM 287 (328)
Q Consensus 268 ~~~~y-~~~~~~~l~~~G~~~ 287 (328)
++.+| ...+-..++++||.+
T Consensus 94 ~~~~~~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 94 ARSIYNFRVLIRMIDEVGFFL 114 (323)
T ss_dssp EECCHHHHHHHHHHHTTCCEE
T ss_pred ccccchHHHHHHHHHhCCCEE
Confidence 00011 122222468899874
No 397
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=73.10 E-value=2.7 Score=35.35 Aligned_cols=55 Identities=15% Similarity=0.283 Sum_probs=44.3
Q ss_pred CCCeeEEecccchhccCC------CCCCEEEEecCccchhhHHHHHHHHhhccCCCcEEEEec
Q 020270 203 KNNVKIIFGRWQDNLSQL------ESYDGIFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFN 259 (328)
Q Consensus 203 ~~~~~~~~g~w~~~~~~~------~~fD~i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~ 259 (328)
..++.++.|...+.++.+ ..||.++.|+- .|+.-+..++.+...|+|||++.+-+
T Consensus 157 ~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D--~Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 157 TQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD--LYEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp CCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC--CHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc--ccchHHHHHHHHHHHhCCCcEEEEcC
Confidence 367999999977665442 36999999994 57777789999999999999999754
No 398
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=69.14 E-value=13 Score=31.03 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=42.6
Q ss_pred cCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchh
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDN 216 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~ 216 (328)
..+..|||+|+|+|.... ..........++|-.+++++.+.+.-.. ..+++++.++..+.
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~-~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFL-GPKLTIYQQDAMTF 79 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTT-GGGEEEECSCGGGC
T ss_pred CCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhcc-CCceEEEECchhhC
Confidence 445789999999999655 4433222278999999999999875422 24788888886553
No 399
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=67.89 E-value=19 Score=30.60 Aligned_cols=74 Identities=20% Similarity=0.198 Sum_probs=53.6
Q ss_pred hcCCCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC-----CCCCEEEE
Q 020270 154 CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL-----ESYDGIFF 228 (328)
Q Consensus 154 ~~~~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~-----~~fD~i~~ 228 (328)
...+..+++.++|.|-.....-.. ....++++..++.++...+ - .. .++.++.+.+.++...+ ..+|+|+|
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L-~~-~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-L-HL-PGLTVVQGNFRHLKRHLAALGVERVDGILA 95 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-T-CC-TTEEEEESCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-h-cc-CCEEEEECCcchHHHHHHHcCCCCcCEEEe
Confidence 345678999999999844433333 4578899999999988877 2 22 58899999887764222 46999999
Q ss_pred ecC
Q 020270 229 DTY 231 (328)
Q Consensus 229 d~f 231 (328)
|--
T Consensus 96 DLG 98 (285)
T 1wg8_A 96 DLG 98 (285)
T ss_dssp ECS
T ss_pred CCc
Confidence 854
No 400
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=66.92 E-value=11 Score=33.61 Aligned_cols=80 Identities=10% Similarity=0.079 Sum_probs=54.5
Q ss_pred ceEEeeccCHHHHHHHHHcCCC--CCCCeeEEecccchhccCCCCCCEEEEecC-ccch---hhHHHHHHHHhhccCC--
Q 020270 180 VTHTILEAHPEVYERMLRTGWG--EKNNVKIIFGRWQDNLSQLESYDGIFFDTY-GEYY---EDLREFHQHLPKLLKP-- 251 (328)
Q Consensus 180 ~~~~a~e~~~~~~~~L~~~g~~--~~~~~~~~~g~w~~~~~~~~~fD~i~~d~f-~e~~---~~l~~~~~~~~~lL~~-- 251 (328)
....+++.++.+++....+-.. ....+++..++..+.... ..||.|+.|.- -+.. .++..++..+.+.|++
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 4578888999999887664211 122577778887765443 46999999864 2222 3566788888888875
Q ss_pred CcEEEEecc
Q 020270 252 GGIYSYFNG 260 (328)
Q Consensus 252 gG~~~~~~~ 260 (328)
|+.+.++++
T Consensus 337 g~~~~iit~ 345 (385)
T 3ldu_A 337 NWSYYLITS 345 (385)
T ss_dssp SCEEEEEES
T ss_pred CCEEEEEEC
Confidence 888887765
No 401
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=66.81 E-value=7.4 Score=32.67 Aligned_cols=73 Identities=12% Similarity=0.169 Sum_probs=47.1
Q ss_pred CceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHc------CCCCC----CCeeEEecccchhccCC-CCCCEE
Q 020270 158 GHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRT------GWGEK----NNVKIIFGRWQDNLSQL-ESYDGI 226 (328)
Q Consensus 158 ~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~------g~~~~----~~~~~~~g~w~~~~~~~-~~fD~i 226 (328)
..||++++|.|......... ...-+++|.++.+++.+.++ ....+ .+++++.++..+.+... ..||.|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 78999999999843222221 22578899999875555332 11111 35788888876655433 469999
Q ss_pred EEecC
Q 020270 227 FFDTY 231 (328)
Q Consensus 227 ~~d~f 231 (328)
|+|.-
T Consensus 169 ~lDP~ 173 (258)
T 2oyr_A 169 YLDPM 173 (258)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99974
No 402
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=66.08 E-value=7.4 Score=33.09 Aligned_cols=59 Identities=14% Similarity=0.213 Sum_probs=42.8
Q ss_pred cCCCceeeecccCCcchhHHhccC---CceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchh
Q 020270 155 SGGGHILNIGFGMGLVDTAIQQYS---PVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDN 216 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~~~~~~~~~~---~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~ 216 (328)
..+..|||+|+|+|.......... ....+++|-++++++.+.+. . ..+++++.++..+.
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~--~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F--GELLELHAGDALTF 102 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H--GGGEEEEESCGGGC
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c--CCCcEEEECChhcC
Confidence 456789999999999544332221 13478999999999999886 2 45688888886554
No 403
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=64.60 E-value=14 Score=30.78 Aligned_cols=58 Identities=16% Similarity=0.160 Sum_probs=36.6
Q ss_pred CCCCEEEEecC-c---cch----------hhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 221 ESYDGIFFDTY-G---EYY----------EDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 221 ~~fD~i~~d~f-~---e~~----------~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
++||+||.|+= . ..| +-+...+..+.++|+++|.+.+++. +.. .......|.+.||.
T Consensus 22 ~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~---d~~------~~~~~~~~~~~gf~ 92 (260)
T 1g60_A 22 KSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT---PFN------CAFICQYLVSKGMI 92 (260)
T ss_dssp TCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC---HHH------HHHHHHHHHHTTCE
T ss_pred cccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC---cHH------HHHHHHHHHhhccc
Confidence 46888888874 1 111 2345777888999999999886642 111 12233357788986
Q ss_pred E
Q 020270 287 M 287 (328)
Q Consensus 287 ~ 287 (328)
.
T Consensus 93 ~ 93 (260)
T 1g60_A 93 F 93 (260)
T ss_dssp E
T ss_pred e
Confidence 3
No 404
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=64.34 E-value=31 Score=29.28 Aligned_cols=130 Identities=15% Similarity=0.096 Sum_probs=76.8
Q ss_pred CCceeeecccCCcchhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhc----cCCCCCCEEEEecCc
Q 020270 157 GGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNL----SQLESYDGIFFDTYG 232 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~----~~~~~fD~i~~d~f~ 232 (328)
...+|++=.|+|......-++. -....+|.+++.++.|.++- .....++++.++....+ +....||.||.|+--
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl-~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLP-HFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSC-CTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHh-CcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 3456777777777432222222 57788999999999887754 33456888887733322 222469999999932
Q ss_pred cchhhHHHHHHHHhhc--cCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 233 EYYEDLREFHQHLPKL--LKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 233 e~~~~l~~~~~~~~~l--L~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
+.-.+.....+.+.+. +.++|++..+=-+-...+ ..-..+.|++.|..+--.|+.|
T Consensus 170 e~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~------~~~~~~~l~~~~~~~l~~el~~ 227 (283)
T 2oo3_A 170 ERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAW------TEQFLRKMREISSKSVRIELHL 227 (283)
T ss_dssp CSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHH------HHHHHHHHHHHCSSEEEEEEEC
T ss_pred CCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHH------HHHHHHHHHhcCCCeEEEEEEe
Confidence 3222333555555443 348898887543322111 1123346777787655556666
No 405
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=63.62 E-value=7 Score=36.75 Aligned_cols=122 Identities=14% Similarity=0.042 Sum_probs=69.6
Q ss_pred ccchHHHHHH--HH-hhcCCCceeeecccCCcchh----HHhccC---------------CceEEeeccCHHHHHHHHH-
Q 020270 141 WEKPLMEAHA--KA-ICSGGGHILNIGFGMGLVDT----AIQQYS---------------PVTHTILEAHPEVYERMLR- 197 (328)
Q Consensus 141 ~~tpL~~a~~--~~-~~~~~~~iLe~g~~~g~~~~----~~~~~~---------------~~~~~a~e~~~~~~~~L~~- 197 (328)
..||-..+.. .. ....+.+|++.+||+|.... ...... ....++++-++..++....
T Consensus 151 fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~n 230 (541)
T 2ar0_A 151 YFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMN 230 (541)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHH
Confidence 3577654311 11 12345689999999998221 111111 2357888988888876543
Q ss_pred ---cCCCCC--CCeeEEecccch-hccCCCCCCEEEEec-Cccchh-------------hHHHHHHHHhhccCCCcEEEE
Q 020270 198 ---TGWGEK--NNVKIIFGRWQD-NLSQLESYDGIFFDT-YGEYYE-------------DLREFHQHLPKLLKPGGIYSY 257 (328)
Q Consensus 198 ---~g~~~~--~~~~~~~g~w~~-~~~~~~~fD~i~~d~-f~e~~~-------------~l~~~~~~~~~lL~~gG~~~~ 257 (328)
+|.+.. ....+..++.-. .......||.|..++ |...+. .-..|++++.+.|+|||++++
T Consensus 231 l~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 231 CLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp HHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEE
Confidence 343210 114455554221 112235799999875 322111 012799999999999999998
Q ss_pred ecccc
Q 020270 258 FNGLC 262 (328)
Q Consensus 258 ~~~~g 262 (328)
...-|
T Consensus 311 V~p~~ 315 (541)
T 2ar0_A 311 VVPDN 315 (541)
T ss_dssp EEEHH
T ss_pred EecCc
Confidence 75433
No 406
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=60.75 E-value=5.8 Score=34.50 Aligned_cols=40 Identities=23% Similarity=0.329 Sum_probs=29.3
Q ss_pred CCCCEEEEecC-c---------cch-hhHHHHHHHHhhccCCCcEEEEecc
Q 020270 221 ESYDGIFFDTY-G---------EYY-EDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 221 ~~fD~i~~d~f-~---------e~~-~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
++||+||.|+= . +.| ..+.+.+.++.++|+|||.+.++++
T Consensus 57 ~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 57 DSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp TCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 36888888873 1 112 2456788889999999999988765
No 407
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=57.35 E-value=8.5 Score=34.28 Aligned_cols=22 Identities=32% Similarity=0.395 Sum_probs=19.4
Q ss_pred hHHHHHHHHhhccCCCcEEEEe
Q 020270 237 DLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 237 ~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
|+..|++...+.|+|||++++-
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEE
Confidence 6678899999999999999964
No 408
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=54.24 E-value=99 Score=28.87 Aligned_cols=125 Identities=16% Similarity=0.051 Sum_probs=72.4
Q ss_pred CCCceeeecccCCcchh-HHhc---cCCceEEeeccCHHHHHHHHH----cCCCCCCCeeEEecccchh--c-cCCCCCC
Q 020270 156 GGGHILNIGFGMGLVDT-AIQQ---YSPVTHTILEAHPEVYERMLR----TGWGEKNNVKIIFGRWQDN--L-SQLESYD 224 (328)
Q Consensus 156 ~~~~iLe~g~~~g~~~~-~~~~---~~~~~~~a~e~~~~~~~~L~~----~g~~~~~~~~~~~g~w~~~--~-~~~~~fD 224 (328)
.+.+|++-+||+|.... ..+. ......++.|-++..++.... +|.+. ....+..++.-.. . .....||
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~-~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI-ENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG-GGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc-CccceEecceeccccccccccccc
Confidence 45689999999998322 1111 235678889988887776543 44321 2345555553222 1 1235699
Q ss_pred EEEEecC-ccch------------h-----------hHHHHHHHHhhccC-CCcEEEEeccccCCcchhHHhhhHHHHHH
Q 020270 225 GIFFDTY-GEYY------------E-----------DLREFHQHLPKLLK-PGGIYSYFNGLCGGNAFFHVVYCHLVSLE 279 (328)
Q Consensus 225 ~i~~d~f-~e~~------------~-----------~l~~~~~~~~~lL~-~gG~~~~~~~~g~~~~~~~~~y~~~~~~~ 279 (328)
.|..++= ...| . ++ .|++++.+.|+ +||++++...-|...+. .+....|..
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~-~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~---~~~~~iRk~ 375 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADF-AFLLHGYYHLKQDNGVMAIVLPHGVLFRG---NAEGTIRKA 375 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHH-HHHHHHHHTBCTTTCEEEEEEETHHHHCC---THHHHHHHH
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhH-HHHHHHHHHhCCCceeEEEEecchHhhCC---chhHHHHHH
Confidence 9987632 1111 1 12 58999999999 99999887554432211 223445555
Q ss_pred HHhcCC
Q 020270 280 LENLGF 285 (328)
Q Consensus 280 l~~~G~ 285 (328)
|.+-+.
T Consensus 376 Lle~~~ 381 (542)
T 3lkd_A 376 LLEEGA 381 (542)
T ss_dssp HHHTTC
T ss_pred HHhCCc
Confidence 555443
No 409
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=49.42 E-value=43 Score=29.99 Aligned_cols=22 Identities=27% Similarity=0.521 Sum_probs=17.9
Q ss_pred HHHcCCHHHHHHHHhCCCCCcc
Q 020270 11 AARNGDIDKVKALIGSGADVSY 32 (328)
Q Consensus 11 Aa~~g~~~~v~~LL~~gad~n~ 32 (328)
.+..|+...|+..|.+|-|++-
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r 50 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIAR 50 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTC
T ss_pred HHHcCChhHHHHHHhcCCchhc
Confidence 3457999999999999888764
No 410
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=47.12 E-value=77 Score=31.37 Aligned_cols=106 Identities=10% Similarity=-0.054 Sum_probs=60.7
Q ss_pred CCceeeecccCCcchhHHhc----cCCceEEeeccCHHHHHHH--HHcC----CCCC-CCeeEEecccchh-ccCCCCCC
Q 020270 157 GGHILNIGFGMGLVDTAIQQ----YSPVTHTILEAHPEVYERM--LRTG----WGEK-NNVKIIFGRWQDN-LSQLESYD 224 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~----~~~~~~~a~e~~~~~~~~L--~~~g----~~~~-~~~~~~~g~w~~~-~~~~~~fD 224 (328)
+..|++.++|+|........ ..+...++.+-++..++.. ..+- .... ....+..+.+... ......||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 56899999999983322111 1245678888888777766 2111 1011 1123333333321 11235699
Q ss_pred EEEEecCc-c--chh--------------------------hHHHHHHHHhhccCCCcEEEEecccc
Q 020270 225 GIFFDTYG-E--YYE--------------------------DLREFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 225 ~i~~d~f~-e--~~~--------------------------~l~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
.|..++=- . .+. ....|++++.++|++||++++...-+
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 98876531 1 000 12357888999999999999865443
No 411
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=45.62 E-value=16 Score=20.51 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=13.3
Q ss_pred HHHHHHHHcCCHHHHHHHH
Q 020270 6 EQLCEAARNGDIDKVKALI 24 (328)
Q Consensus 6 t~L~~Aa~~g~~~~v~~LL 24 (328)
..+..||..|+.+.++.|=
T Consensus 15 QqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHH
Confidence 3466778888888777663
No 412
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=44.72 E-value=36 Score=29.94 Aligned_cols=55 Identities=18% Similarity=0.273 Sum_probs=42.2
Q ss_pred CCceeeecccCCcchhHHhc-cCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEeccc
Q 020270 157 GGHILNIGFGMGLVDTAIQQ-YSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRW 213 (328)
Q Consensus 157 ~~~iLe~g~~~g~~~~~~~~-~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w 213 (328)
...|+|+|-|.|........ ..+..+.++|..++.+..|.+.- ...+++++.++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~--~~~~l~ii~~D~ 114 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF--EGSPLQILKRDP 114 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT--TTSSCEEECSCT
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc--cCCCEEEEECCc
Confidence 46799999999996554443 34567999999999999998754 245788888873
No 413
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=43.39 E-value=72 Score=30.88 Aligned_cols=81 Identities=16% Similarity=0.145 Sum_probs=51.8
Q ss_pred ceEEeeccCHHHHHHHHHcC--CCCCCCeeEEecccchhccCC--CCCCEEEEecC-ccc---hhhHHHHHHHHhhcc--
Q 020270 180 VTHTILEAHPEVYERMLRTG--WGEKNNVKIIFGRWQDNLSQL--ESYDGIFFDTY-GEY---YEDLREFHQHLPKLL-- 249 (328)
Q Consensus 180 ~~~~a~e~~~~~~~~L~~~g--~~~~~~~~~~~g~w~~~~~~~--~~fD~i~~d~f-~e~---~~~l~~~~~~~~~lL-- 249 (328)
....+.+-++.+++....+- +.....+.+..++..+..... +.||.|..++- .+- -.++.++++.+.+.+
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 336 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHh
Confidence 46778889999998776542 112234677788877654333 27999999853 222 234556666655554
Q ss_pred -CCCcEEEEecc
Q 020270 250 -KPGGIYSYFNG 260 (328)
Q Consensus 250 -~~gG~~~~~~~ 260 (328)
.|||++.+.++
T Consensus 337 ~~~g~~~~ilt~ 348 (703)
T 3v97_A 337 QFGGWNLSLFSA 348 (703)
T ss_dssp HCTTCEEEEEES
T ss_pred hCCCCeEEEEeC
Confidence 48999987755
No 414
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=34.18 E-value=67 Score=22.58 Aligned_cols=49 Identities=10% Similarity=0.116 Sum_probs=32.6
Q ss_pred HHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 241 FHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 241 ~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
..+++-++++...+..|.-|..... .| -||..++..|++.|.. |++++|
T Consensus 5 ~~~~v~~~i~~~~Vvlf~kg~~~~~-~C--p~C~~ak~~L~~~gi~--y~~~di 53 (111)
T 3zyw_A 5 LNLRLKKLTHAAPCMLFMKGTPQEP-RC--GFSKQMVEILHKHNIQ--FSSFDI 53 (111)
T ss_dssp HHHHHHHHHTSSSEEEEESBCSSSB-SS--HHHHHHHHHHHHTTCC--CEEEEG
T ss_pred HHHHHHHHHhcCCEEEEEecCCCCC-cc--hhHHHHHHHHHHcCCC--eEEEEC
Confidence 3445556777777877765543322 22 5788999999999976 555666
No 415
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=29.20 E-value=70 Score=23.55 Aligned_cols=49 Identities=10% Similarity=0.087 Sum_probs=31.6
Q ss_pred HHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 241 FHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 241 ~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
..+.+.++.+..-+..|..+... ...| .||..++..|++.|+. |++++|
T Consensus 24 ~~~~v~~~i~~~~Vvvy~ks~~~-~~~C--p~C~~ak~~L~~~gv~--y~~vdI 72 (135)
T 2wci_A 24 TIEKIQRQIAENPILLYMKGSPK-LPSC--GFSAQAVQALAACGER--FAYVDI 72 (135)
T ss_dssp HHHHHHHHHHHCSEEEEESBCSS-SBSS--HHHHHHHHHHHTTCSC--CEEEEG
T ss_pred HHHHHHHHhccCCEEEEEEecCC-CCCC--ccHHHHHHHHHHcCCc--eEEEEC
Confidence 34444445555566666665544 3333 5799999999999976 566666
No 416
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=28.44 E-value=21 Score=30.31 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=30.7
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCe
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFS 286 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~ 286 (328)
....++.++..+.++|+|||++++.+...- =-++|+..+++.||.
T Consensus 208 EL~~L~~~L~~a~~~L~~gGrl~visfHSL--------EDRiVK~~~~~~~~~ 252 (285)
T 1wg8_A 208 ELNALKEFLEQAAEVLAPGGRLVVIAFHSL--------EDRVVKRFLRESGLK 252 (285)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEECSHH--------HHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEecCcH--------HHHHHHHHHHhCCcc
Confidence 345678999999999999999996543222 223566666654433
No 417
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=28.41 E-value=45 Score=22.00 Aligned_cols=23 Identities=13% Similarity=0.043 Sum_probs=17.5
Q ss_pred hhhHHHHHHHHhcCCeEEEEEee
Q 020270 271 VYCHLVSLELENLGFSMQLIPLP 293 (328)
Q Consensus 271 ~y~~~~~~~l~~~G~~~~~~~~~ 293 (328)
.||.-++..|++.|...++.+|.
T Consensus 15 p~C~~ak~~L~~~gi~y~~idI~ 37 (87)
T 1aba_A 15 GPCDNAKRLLTVKKQPFEFINIM 37 (87)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESC
T ss_pred ccHHHHHHHHHHcCCCEEEEEee
Confidence 47889999999999875555444
No 418
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}
Probab=28.38 E-value=70 Score=24.87 Aligned_cols=47 Identities=19% Similarity=0.310 Sum_probs=30.5
Q ss_pred hhhHHHHHHHHhcCCeEEEEEeeCCCCCCccccccccccccc-cCcccccceee
Q 020270 271 VYCHLVSLELENLGFSMQLIPLPVKNCLGEEVWEGVKHKYWQ-LDTYYLPVCQF 323 (328)
Q Consensus 271 ~y~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~ 323 (328)
.++..+++.|.+.|+..|...++... +++.|+. |-. -|..++|+...
T Consensus 13 ~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~~----~~~~~P~g~vP~L~~ 60 (210)
T 3m3m_A 13 GNCYKIKLMLNLLGLPYEWQAVDILG--GDTQTEA----FLAKNPNGKIPVLEL 60 (210)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTT--TTTSSHH----HHTTCTTCCSCEEEE
T ss_pred CcHHHHHHHHHHcCCCCEEEEecCCC--ccccCHH----HHhhCCCCCCCEEEe
Confidence 56778999999999987766666522 3333332 222 24568898764
No 419
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=27.33 E-value=19 Score=26.07 Aligned_cols=23 Identities=17% Similarity=0.131 Sum_probs=18.3
Q ss_pred hhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 271 VYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 271 ~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
-||..++..|++.|.. +|++++|
T Consensus 36 p~C~~ak~lL~~~gv~-~~~~vdV 58 (118)
T 2wem_A 36 GFSNAVVQILRLHGVR-DYAAYNV 58 (118)
T ss_dssp HHHHHHHHHHHHTTCC-CCEEEES
T ss_pred HHHHHHHHHHHHcCCC-CCEEEEc
Confidence 4788999999999975 4666667
No 420
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=26.87 E-value=85 Score=29.32 Aligned_cols=117 Identities=11% Similarity=0.052 Sum_probs=64.4
Q ss_pred cchHHHHH--HHHhhcCCCceeeecccCCcchhH----Hhc----c--------CCceEEeeccCHHHHHHHH----HcC
Q 020270 142 EKPLMEAH--AKAICSGGGHILNIGFGMGLVDTA----IQQ----Y--------SPVTHTILEAHPEVYERML----RTG 199 (328)
Q Consensus 142 ~tpL~~a~--~~~~~~~~~~iLe~g~~~g~~~~~----~~~----~--------~~~~~~a~e~~~~~~~~L~----~~g 199 (328)
.||-..+. .........+|++-+||+|..... ... . .....++.+-++..++... -+|
T Consensus 228 yTP~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 228 YTPKSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CCCHHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred eCCHHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 47755442 122222234899999999972211 110 0 1456788888888777643 345
Q ss_pred CCCCCCeeEEecccchh-ccCCCCCCEEEEecC-cc-ch----------------------------hhHHHHHHHHhhc
Q 020270 200 WGEKNNVKIIFGRWQDN-LSQLESYDGIFFDTY-GE-YY----------------------------EDLREFHQHLPKL 248 (328)
Q Consensus 200 ~~~~~~~~~~~g~w~~~-~~~~~~fD~i~~d~f-~e-~~----------------------------~~l~~~~~~~~~l 248 (328)
.+.. +.+..++.-.. ......||.|..++= .. .| .++ .|++++.+.
T Consensus 308 i~~~--i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~-~Fl~~~l~~ 384 (544)
T 3khk_A 308 IDFN--FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANF-AWMLHMLYH 384 (544)
T ss_dssp CCCB--CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHH-HHHHHHHHT
T ss_pred CCcc--cceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhH-HHHHHHHHH
Confidence 3322 22233432111 111246888877632 11 11 112 689999999
Q ss_pred cCCCcEEEEeccc
Q 020270 249 LKPGGIYSYFNGL 261 (328)
Q Consensus 249 L~~gG~~~~~~~~ 261 (328)
|+|||++++...-
T Consensus 385 Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 385 LAPTGSMALLLAN 397 (544)
T ss_dssp EEEEEEEEEEEET
T ss_pred hccCceEEEEecc
Confidence 9999998887543
No 421
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=26.78 E-value=46 Score=21.63 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=19.3
Q ss_pred hhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 271 VYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 271 ~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
-||..++..|.+.|...++.++++
T Consensus 15 p~C~~~~~~L~~~~i~~~~~~vd~ 38 (89)
T 3msz_A 15 PYCVWAKQWFEENNIAFDETIIDD 38 (89)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCS
T ss_pred hhHHHHHHHHHHcCCCceEEEeec
Confidence 468888999999998777776666
No 422
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=26.77 E-value=15 Score=27.01 Aligned_cols=13 Identities=38% Similarity=0.997 Sum_probs=10.1
Q ss_pred ccccccccccccccCc
Q 020270 300 EEVWEGVKHKYWQLDT 315 (328)
Q Consensus 300 ~~~w~~~~~~~~~~~~ 315 (328)
+..| +|+||.+|+
T Consensus 21 d~~r---KRHYWrLD~ 33 (125)
T 2coa_A 21 DTLR---KRHYWRLDC 33 (125)
T ss_dssp SCCC---EEEEEEECS
T ss_pred Cccc---cceeeEecC
Confidence 4455 899999985
No 423
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=26.71 E-value=1.2e+02 Score=20.56 Aligned_cols=47 Identities=13% Similarity=0.177 Sum_probs=28.9
Q ss_pred HHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 243 QHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 243 ~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
+.+..+++..-+..|+.|... ..-| -||..++..|.+.|.. |+.++|
T Consensus 8 ~~~~~~i~~~~vvvf~~g~~~-~~~C--~~C~~~~~~L~~~~i~--~~~vdi 54 (105)
T 2yan_A 8 ERLKVLTNKASVMLFMKGNKQ-EAKC--GFSKQILEILNSTGVE--YETFDI 54 (105)
T ss_dssp HHHHHHHTSSSEEEEESBCSS-SBCT--THHHHHHHHHHHHTCC--CEEEEG
T ss_pred HHHHHHhccCCEEEEEecCCC-CCCC--ccHHHHHHHHHHCCCC--eEEEEC
Confidence 344445555556666555432 2222 4688899999999865 556666
No 424
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=26.71 E-value=23 Score=30.96 Aligned_cols=41 Identities=17% Similarity=0.136 Sum_probs=28.4
Q ss_pred hhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHhc
Q 020270 235 YEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELENL 283 (328)
Q Consensus 235 ~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~~ 283 (328)
...++.+++.+.++|+|||++++.+...- =-++|+..+++.
T Consensus 250 L~~L~~~L~~a~~~L~~gGRl~VISFHSL--------EDRiVK~~f~~~ 290 (347)
T 3tka_A 250 LEEIEQALKSSLNVLAPGGRLSIISFHSL--------EDRIVKRFMREN 290 (347)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEESSHH--------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCch--------hHHHHHHHHHHh
Confidence 35567888999999999999997543222 223566666653
No 425
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=26.39 E-value=37 Score=23.19 Aligned_cols=22 Identities=14% Similarity=0.215 Sum_probs=17.1
Q ss_pred hhhHHHHHHHHhcCCeEEEEEeeC
Q 020270 271 VYCHLVSLELENLGFSMQLIPLPV 294 (328)
Q Consensus 271 ~y~~~~~~~l~~~G~~~~~~~~~~ 294 (328)
.||..++..|++.|.. |++++|
T Consensus 15 p~C~~aK~~L~~~gi~--y~~idi 36 (92)
T 2lqo_A 15 GYCLRLKTALTANRIA--YDEVDI 36 (92)
T ss_dssp SSHHHHHHHHHHTTCC--CEEEET
T ss_pred HhHHHHHHHHHhcCCc--eEEEEc
Confidence 4788999999999976 455555
No 426
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=26.38 E-value=40 Score=30.01 Aligned_cols=22 Identities=18% Similarity=0.134 Sum_probs=17.8
Q ss_pred hHHHHHHHHhhccCCCcEEEEe
Q 020270 237 DLREFHQHLPKLLKPGGIYSYF 258 (328)
Q Consensus 237 ~l~~~~~~~~~lL~~gG~~~~~ 258 (328)
|+..|++...+.|+|||++++-
T Consensus 203 D~~~FL~~Ra~eL~pGG~mvl~ 224 (384)
T 2efj_A 203 DFTTFLRIHSEELISRGRMLLT 224 (384)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhccCCeEEEE
Confidence 3456677889999999999964
No 427
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=26.22 E-value=70 Score=27.91 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=52.1
Q ss_pred cCCCceeeeccc-CCcchhHHhccCCc-eEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC--CCCCEEEEec
Q 020270 155 SGGGHILNIGFG-MGLVDTAIQQYSPV-THTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL--ESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~-~g~~~~~~~~~~~~-~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~--~~fD~i~~d~ 230 (328)
..+..+|=.|.| .|......-...-. ..++...+++-.+.+.+.|++.-.........+.+.+... ..+|.|+ |+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vi-d~ 269 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSL-EC 269 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEE-EC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEE-EC
Confidence 445677778853 23211111111122 3445555666677777878642111110001232222111 2588765 44
Q ss_pred CccchhhHHHHHHHHhhccCCC-cEEEEecccc
Q 020270 231 YGEYYEDLREFHQHLPKLLKPG-GIYSYFNGLC 262 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~g-G~~~~~~~~g 262 (328)
... . +.++...++|+++ |+++.+....
T Consensus 270 ~g~---~--~~~~~~~~~l~~~~G~iv~~G~~~ 297 (374)
T 1cdo_A 270 VGN---V--GVMRNALESCLKGWGVSVLVGWTD 297 (374)
T ss_dssp SCC---H--HHHHHHHHTBCTTTCEEEECSCCS
T ss_pred CCC---H--HHHHHHHHHhhcCCcEEEEEcCCC
Confidence 432 1 5677888999999 9999875443
No 428
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=25.61 E-value=48 Score=27.90 Aligned_cols=44 Identities=23% Similarity=0.361 Sum_probs=29.6
Q ss_pred cCCCCCCEEEEecCc----cchhhH-------HHHHHHHhhccCCCcEEEEecccc
Q 020270 218 SQLESYDGIFFDTYG----EYYEDL-------REFHQHLPKLLKPGGIYSYFNGLC 262 (328)
Q Consensus 218 ~~~~~fD~i~~d~f~----e~~~~l-------~~~~~~~~~lL~~gG~~~~~~~~g 262 (328)
+.+..||+||.+.-. -||.+. +-+-....+.|+|||.+. .-+.|
T Consensus 207 ~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv-~~aYG 261 (324)
T 3trk_A 207 ATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLL-IRAYG 261 (324)
T ss_dssp GGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEE-EEECC
T ss_pred CcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEE-EEeec
Confidence 344789999998763 355432 344446889999999998 33444
No 429
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=25.54 E-value=28 Score=29.82 Aligned_cols=41 Identities=27% Similarity=0.331 Sum_probs=28.7
Q ss_pred chhhHHHHHHHHhhccCCCcEEEEeccccCCcchhHHhhhHHHHHHHHh
Q 020270 234 YYEDLREFHQHLPKLLKPGGIYSYFNGLCGGNAFFHVVYCHLVSLELEN 282 (328)
Q Consensus 234 ~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~~~~~~~y~~~~~~~l~~ 282 (328)
....+..++..+.++|+|||++++.+...-. -++|+..+++
T Consensus 220 el~~l~~~l~~~~~~l~~ggr~~visfhsle--------dr~vk~~~~~ 260 (301)
T 1m6y_A 220 ELENLKEFLKKAEDLLNPGGRIVVISFHSLE--------DRIVKETFRN 260 (301)
T ss_dssp HHHHHHHHHHHGGGGEEEEEEEEEEESSHHH--------HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCEEEEEecCcHH--------HHHHHHHhhc
Confidence 3456778999999999999999975443322 2356666665
No 430
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=25.30 E-value=54 Score=28.72 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=54.3
Q ss_pred hcCCCceeeeccc-CCcchhHH-hccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC--CCCCEEEEe
Q 020270 154 CSGGGHILNIGFG-MGLVDTAI-QQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL--ESYDGIFFD 229 (328)
Q Consensus 154 ~~~~~~iLe~g~~-~g~~~~~~-~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~--~~fD~i~~d 229 (328)
...+..|+=.|.| .|+..... +....-..++...+++-.+.+.+.|++.-.+.......+.+.+..+ ..+|.++ |
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vi-d 269 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSF-E 269 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEE-E
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEE-E
Confidence 3456677777874 23311111 1111113455566777777888888753111110011232222111 2588765 4
Q ss_pred cCccchhhHHHHHHHHhhccCCC-cEEEEecccc
Q 020270 230 TYGEYYEDLREFHQHLPKLLKPG-GIYSYFNGLC 262 (328)
Q Consensus 230 ~f~e~~~~l~~~~~~~~~lL~~g-G~~~~~~~~g 262 (328)
+.... +.++...+++++| |+++.+....
T Consensus 270 ~~g~~-----~~~~~~~~~l~~g~G~iv~~G~~~ 298 (378)
T 3uko_A 270 CIGNV-----SVMRAALECCHKGWGTSVIVGVAA 298 (378)
T ss_dssp CSCCH-----HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred CCCCH-----HHHHHHHHHhhccCCEEEEEcccC
Confidence 54321 5678888999997 9999875443
No 431
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=24.43 E-value=2.3e+02 Score=24.33 Aligned_cols=100 Identities=12% Similarity=0.034 Sum_probs=54.1
Q ss_pred hhcCCCceeeeccc-CCcchhHHhccCCc-eEEeeccCHHHHHHHHHcCCCCCCCeeEE---ecccchhccCC--CCCCE
Q 020270 153 ICSGGGHILNIGFG-MGLVDTAIQQYSPV-THTILEAHPEVYERMLRTGWGEKNNVKII---FGRWQDNLSQL--ESYDG 225 (328)
Q Consensus 153 ~~~~~~~iLe~g~~-~g~~~~~~~~~~~~-~~~a~e~~~~~~~~L~~~g~~~~~~~~~~---~g~w~~~~~~~--~~fD~ 225 (328)
....+..++-.|.| .|+.....-...-. ..++....++-.+.+.+.|++.- +... ...+.+.+... ..+|.
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV--LQISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE--EECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE--EcCcccccchHHHHHHHHhCCCCCE
Confidence 33556778878864 23321111111222 45566678888888888886421 1100 01222211111 35887
Q ss_pred EEEecCccchhhHHHHHHHHhhccCCCcEEEEecc
Q 020270 226 IFFDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNG 260 (328)
Q Consensus 226 i~~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~ 260 (328)
|+- +.... ..++...++|+++|+++.+..
T Consensus 246 vid-~~g~~-----~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 246 TIE-CTGAE-----ASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EEE-CSCCH-----HHHHHHHHHSCTTCEEEECSC
T ss_pred EEE-CCCCh-----HHHHHHHHHhcCCCEEEEEec
Confidence 754 44321 456778889999999998743
No 432
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=24.31 E-value=60 Score=28.39 Aligned_cols=100 Identities=16% Similarity=0.152 Sum_probs=51.6
Q ss_pred cCCCceeeeccc-CCcchhHHhccCCc-eEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC--CCCCEEEEec
Q 020270 155 SGGGHILNIGFG-MGLVDTAIQQYSPV-THTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL--ESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~-~g~~~~~~~~~~~~-~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~--~~fD~i~~d~ 230 (328)
..+..++=.|.| .|......-...-. ..++...+++-.+.+.+.|++.-.+.......+.+.+... ..+|.|+ |+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvi-d~ 272 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSL-DC 272 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEE-ES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEE-EC
Confidence 445677778863 23221111111122 3445556666677777888642111110001232222111 2588765 45
Q ss_pred CccchhhHHHHHHHHhhccCCC-cEEEEecc
Q 020270 231 YGEYYEDLREFHQHLPKLLKPG-GIYSYFNG 260 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~g-G~~~~~~~ 260 (328)
... . +.++...++|+++ |+++.+..
T Consensus 273 ~G~---~--~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 273 AGT---A--QTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SCC---H--HHHHHHHHTBCTTTCEEEECCC
T ss_pred CCC---H--HHHHHHHHHhhcCCCEEEEECC
Confidence 432 1 5677888999999 99997654
No 433
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}
Probab=23.78 E-value=71 Score=25.29 Aligned_cols=48 Identities=17% Similarity=0.091 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHhcCCeEEEEEeeCCCCCCccccccccccccccCcccccceee
Q 020270 271 VYCHLVSLELENLGFSMQLIPLPVKNCLGEEVWEGVKHKYWQLDTYYLPVCQF 323 (328)
Q Consensus 271 ~y~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 323 (328)
.||..+++.|++.|+..|...++..+ ++..|+..... -|.-++|+...
T Consensus 13 p~~~~vr~~L~~~gi~~e~~~v~~~~--~~~~~~~~~~~---~P~g~vP~L~~ 60 (225)
T 3m8n_A 13 GNSYKVRLALALLDAPYRAVEVDILR--GESRTPDFLAK---NPSGQVPLLET 60 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCGGG--TTTSSHHHHTT---CTTCCSSEEEC
T ss_pred CCHHHHHHHHHHcCCCeEEEEeCCCC--CccCCHHHHHh---CCCCCCCEEEe
Confidence 46778999999999987777776622 33444332221 24558888764
No 434
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=23.27 E-value=48 Score=23.41 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=24.8
Q ss_pred hhHHHHHHHHh----cCCeEEEEEeeCCCCCCccccccccccccccCcccccceeeccC
Q 020270 272 YCHLVSLELEN----LGFSMQLIPLPVKNCLGEEVWEGVKHKYWQLDTYYLPVCQFLQD 326 (328)
Q Consensus 272 y~~~~~~~l~~----~G~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 326 (328)
+|..++..|.+ .| ++|+.++|.+ +..+ ..+|- +++|+..+..|
T Consensus 42 ~C~~a~~~L~~l~~e~~--i~~~~vDId~---d~~l---~~~yg----v~VP~l~~~~d 88 (107)
T 2fgx_A 42 LCEEMIASLRVLQKKSW--FELEVINIDG---NEHL---TRLYN----DRVPVLFAVNE 88 (107)
T ss_dssp HHHHHHHHHHHHHHHSC--CCCEEEETTT---CHHH---HHHST----TSCSEEEETTT
T ss_pred hHHHHHHHHHHHHHhcC--CeEEEEECCC---CHHH---HHHhC----CCCceEEEEEC
Confidence 56666666666 67 6677888832 2222 34552 35888754433
No 435
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=22.70 E-value=80 Score=23.96 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=36.2
Q ss_pred cCCCceeeecccCCc-chhHHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC-CCCCEEEEecC-
Q 020270 155 SGGGHILNIGFGMGL-VDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL-ESYDGIFFDTY- 231 (328)
Q Consensus 155 ~~~~~iLe~g~~~g~-~~~~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~-~~fD~i~~d~f- 231 (328)
....+++|+|+|.|. .........-....+..-++.-++ .+.++..+....+ ..||+||.---
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~--------------~v~dDiF~P~~~~Y~~~DLIYsirPP 99 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG--------------IVRDDITSPRMEIYRGAALIYSIRPP 99 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT--------------EECCCSSSCCHHHHTTEEEEEEESCC
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc--------------eEEccCCCCcccccCCcCEEEEcCCC
Confidence 345699999999995 333333223333444432222111 3333322211111 46999976443
Q ss_pred ccchhhHHHHHH
Q 020270 232 GEYYEDLREFHQ 243 (328)
Q Consensus 232 ~e~~~~l~~~~~ 243 (328)
+|....+.++-+
T Consensus 100 ~El~~~i~~lA~ 111 (153)
T 2k4m_A 100 AEIHSSLMRVAD 111 (153)
T ss_dssp TTTHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555544443333
No 436
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.48 E-value=17 Score=26.81 Aligned_cols=10 Identities=50% Similarity=1.202 Sum_probs=8.6
Q ss_pred ccccccccCc
Q 020270 306 VKHKYWQLDT 315 (328)
Q Consensus 306 ~~~~~~~~~~ 315 (328)
.+|+||.+|+
T Consensus 24 rKRHYWrLD~ 33 (129)
T 2d9z_A 24 RKRHYWRLDS 33 (129)
T ss_dssp CEEEEEEEES
T ss_pred ccceeeEecC
Confidence 5999999975
No 437
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=21.04 E-value=34 Score=17.97 Aligned_cols=12 Identities=33% Similarity=0.684 Sum_probs=8.9
Q ss_pred CCcccccccccc
Q 020270 298 LGEEVWEGVKHK 309 (328)
Q Consensus 298 ~~~~~w~~~~~~ 309 (328)
.+..+|+|.+.+
T Consensus 19 pkgkvwngfdck 30 (36)
T 1iyc_A 19 PKGKVWNGFDCK 30 (36)
T ss_dssp CSSCEEETTEEE
T ss_pred CCcceecCcccc
Confidence 356799998765
No 438
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=20.80 E-value=1.5e+02 Score=25.30 Aligned_cols=105 Identities=14% Similarity=0.064 Sum_probs=57.6
Q ss_pred hhcCCCceeeeccc-CCcchh-HHhccCCceEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhc---cCCCCCCEEE
Q 020270 153 ICSGGGHILNIGFG-MGLVDT-AIQQYSPVTHTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNL---SQLESYDGIF 227 (328)
Q Consensus 153 ~~~~~~~iLe~g~~-~g~~~~-~~~~~~~~~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~---~~~~~fD~i~ 227 (328)
....+..++=.|.| .|.... ..........++...+++-.+++.+.|++.-.+. ....+.+.. .....+|.|
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~--~~~~~~~~~~~~~~~~g~d~v- 233 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNS--SEMSAPQMQSVLRELRFNQLI- 233 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEET--TTSCHHHHHHHHGGGCSSEEE-
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeC--CCCCHHHHHHhhcccCCcccc-
Confidence 33556677777774 222111 1112222334566778888889999997531110 011122211 222345554
Q ss_pred EecCccchhhHHHHHHHHhhccCCCcEEEEeccccCCc
Q 020270 228 FDTYGEYYEDLREFHQHLPKLLKPGGIYSYFNGLCGGN 265 (328)
Q Consensus 228 ~d~f~e~~~~l~~~~~~~~~lL~~gG~~~~~~~~g~~~ 265 (328)
+|+.... ..++...+++++||+++.+...+...
T Consensus 234 ~d~~G~~-----~~~~~~~~~l~~~G~~v~~g~~~~~~ 266 (346)
T 4a2c_A 234 LETAGVP-----QTVELAVEIAGPHAQLALVGTLHQDL 266 (346)
T ss_dssp EECSCSH-----HHHHHHHHHCCTTCEEEECCCCSSCE
T ss_pred ccccccc-----chhhhhhheecCCeEEEEEeccCCCc
Confidence 4554321 56778889999999999887666543
No 439
>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A*
Probab=20.76 E-value=1.1e+02 Score=23.62 Aligned_cols=46 Identities=15% Similarity=0.186 Sum_probs=29.4
Q ss_pred hhhHHHHHHHHhcCCeEEEEEeeCCCCCCcccccccccccccc-Cccccccee
Q 020270 271 VYCHLVSLELENLGFSMQLIPLPVKNCLGEEVWEGVKHKYWQL-DTYYLPVCQ 322 (328)
Q Consensus 271 ~y~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~ 322 (328)
.||..+++.|.+.|+..|...++.. .|+.....|-.. |.-++|+..
T Consensus 12 p~~~~v~~~L~~~gi~~e~~~v~~~------~~~~~~~~~~~~~P~g~vP~L~ 58 (211)
T 1gnw_A 12 IATRRVLIALHEKNLDFELVHVELK------DGEHKKEPFLSRNPFGQVPAFE 58 (211)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCGG------GTGGGSTTGGGTCTTCCSCEEE
T ss_pred cchHHHHHHHHhcCCCcEEEEeccc------cccccCHHHHHhCCCCCCCEEE
Confidence 4677899999999987666555541 122333444444 455889875
No 440
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=20.74 E-value=93 Score=27.09 Aligned_cols=101 Identities=14% Similarity=0.096 Sum_probs=51.4
Q ss_pred cCCCceeeeccc-CCcchhHHhccCCc-eEEeeccCHHHHHHHHHcCCCCCCCeeEEecccchhccCC--CCCCEEEEec
Q 020270 155 SGGGHILNIGFG-MGLVDTAIQQYSPV-THTILEAHPEVYERMLRTGWGEKNNVKIIFGRWQDNLSQL--ESYDGIFFDT 230 (328)
Q Consensus 155 ~~~~~iLe~g~~-~g~~~~~~~~~~~~-~~~a~e~~~~~~~~L~~~g~~~~~~~~~~~g~w~~~~~~~--~~fD~i~~d~ 230 (328)
..+..++=.|.| .|......-...-. ..++...+++-.+.+.+.|++.-.........+.+.+..+ ..+|.|+ |+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vi-d~ 268 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF-EV 268 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE-EC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEE-EC
Confidence 455677778853 22211111111122 3445556666677777878642111110001232222111 2588765 45
Q ss_pred CccchhhHHHHHHHHhhccCCC-cEEEEeccc
Q 020270 231 YGEYYEDLREFHQHLPKLLKPG-GIYSYFNGL 261 (328)
Q Consensus 231 f~e~~~~l~~~~~~~~~lL~~g-G~~~~~~~~ 261 (328)
... . +.++...++|+++ |+++.+...
T Consensus 269 ~g~---~--~~~~~~~~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 269 IGR---L--DTMVTALSCCQEAYGVSVIVGVP 295 (374)
T ss_dssp SCC---H--HHHHHHHHHBCTTTCEEEECSCC
T ss_pred CCC---H--HHHHHHHHHhhcCCcEEEEeccC
Confidence 432 1 5667788899999 999977543
No 441
>1r1f_A Palicourein; cyclotide, plant protein; NMR {Palicourea condensata} SCOP: g.3.3.4
Probab=20.00 E-value=25 Score=19.44 Aligned_cols=9 Identities=33% Similarity=0.999 Sum_probs=6.7
Q ss_pred cccccceee
Q 020270 315 TYYLPVCQF 323 (328)
Q Consensus 315 ~~~~~~~~~ 323 (328)
-+++||||+
T Consensus 7 Cv~iP~Ct~ 15 (37)
T 1r1f_A 7 CRVIPVCTY 15 (37)
T ss_dssp CSSSCSCSS
T ss_pred eEEcccccc
Confidence 367898876
Done!