Query 020272
Match_columns 328
No_of_seqs 200 out of 1905
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 08:24:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020272.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020272hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 3.5E-47 7.7E-52 350.9 30.7 250 29-294 62-331 (365)
2 COG0631 PTC1 Serine/threonine 100.0 6.4E-44 1.4E-48 317.5 22.8 242 29-296 5-255 (262)
3 PTZ00224 protein phosphatase 2 100.0 1.5E-42 3.2E-47 321.1 29.3 253 12-295 6-273 (381)
4 KOG0697 Protein phosphatase 1B 100.0 9.1E-43 2E-47 296.2 21.9 262 13-294 7-292 (379)
5 KOG0698 Serine/threonine prote 100.0 1.4E-40 3.1E-45 305.5 28.7 251 32-296 40-307 (330)
6 PF00481 PP2C: Protein phospha 100.0 3.4E-42 7.4E-47 306.8 14.6 237 33-271 1-253 (254)
7 cd00143 PP2Cc Serine/threonine 100.0 1.3E-38 2.8E-43 283.1 27.5 243 33-292 2-254 (254)
8 smart00332 PP2Cc Serine/threon 100.0 6.1E-38 1.3E-42 279.3 26.6 243 30-290 4-255 (255)
9 PRK14559 putative protein seri 100.0 2.1E-38 4.7E-43 308.8 23.7 240 30-293 373-635 (645)
10 KOG0699 Serine/threonine prote 100.0 2.9E-36 6.3E-41 265.0 17.7 162 124-294 330-504 (542)
11 KOG0700 Protein phosphatase 2C 100.0 2.5E-31 5.5E-36 239.3 18.7 221 45-267 84-378 (390)
12 KOG1323 Serine/threonine phosp 99.9 2.4E-25 5.2E-30 194.4 20.2 233 61-295 143-489 (493)
13 KOG1379 Serine/threonine prote 99.9 3.2E-24 6.8E-29 187.4 20.4 213 44-291 89-329 (330)
14 PF13672 PP2C_2: Protein phosp 99.9 3.6E-21 7.9E-26 166.8 12.7 178 37-249 3-194 (212)
15 KOG0618 Serine/threonine phosp 99.8 9.1E-20 2E-24 178.6 13.5 245 29-293 519-772 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.8 9.4E-17 2E-21 137.0 19.0 183 33-264 5-192 (193)
17 TIGR02865 spore_II_E stage II 99.7 2.1E-15 4.5E-20 152.4 19.7 204 30-292 550-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 1.2E-12 2.7E-17 111.4 18.2 176 62-293 4-193 (193)
19 COG2208 RsbU Serine phosphatas 98.2 0.00016 3.6E-09 67.9 19.1 186 45-293 161-366 (367)
20 PF09436 DUF2016: Domain of un 53.3 8.6 0.00019 26.9 1.4 19 220-238 24-42 (72)
21 COG3315 O-Methyltransferase in 39.9 66 0.0014 29.3 5.4 89 145-248 104-194 (297)
22 COG3700 AphA Acid phosphatase 39.5 46 0.00099 27.9 3.8 46 223-268 71-131 (237)
23 PF06972 DUF1296: Protein of u 35.6 40 0.00086 22.6 2.4 26 237-262 19-45 (60)
24 PRK10693 response regulator of 29.7 4.2E+02 0.0091 23.9 10.6 50 103-156 208-259 (303)
25 COG2168 DsrH Uncharacterized c 29.3 41 0.00089 24.9 1.8 29 221-249 23-51 (96)
26 PF01436 NHL: NHL repeat; Int 21.7 1.5E+02 0.0033 16.1 3.3 20 132-151 9-28 (28)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.5e-47 Score=350.87 Aligned_cols=250 Identities=34% Similarity=0.556 Sum_probs=212.8
Q ss_pred CCceEEEEEeCcCCCCCCCccEEEeecCC--------CCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHH
Q 020272 29 NGKFSYGYASSPGKRSSMEDFYETRIDGV--------EGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKS 100 (328)
Q Consensus 29 ~~~~~~~~~s~~G~r~~neDa~~~~~~~~--------~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~ 100 (328)
...++++.+|++|.|+.|||++++..... ......+|+|||||||+.+|++|++.+++.+.+.......+..
T Consensus 62 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~ 141 (365)
T PLN03145 62 IPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEK 141 (365)
T ss_pred cCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHH
Confidence 35678999999999999999987643211 1123469999999999999999999999999876655556788
Q ss_pred HHHHHHHhhcHHHHhhhc-cCCCCCCceEEEEEEECCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhHHHHHHHhCC
Q 020272 101 AIADAYSHTDSEFLKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG 179 (328)
Q Consensus 101 ~l~~~~~~~~~~l~~~~~-~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e~~ri~~~~g 179 (328)
+|.++|..++..+.+... .....+|||++++++.++++|++|+||||+|++++|++++||+||++.++.|..||.+.+|
T Consensus 142 al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg 221 (365)
T PLN03145 142 VVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGG 221 (365)
T ss_pred HHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCC
Confidence 899999999999876532 2334599999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeccceeecCccccccccCCcccee-------eeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhh----cc
Q 020272 180 FVMWAGTWRVGGVLAVSRAFGDRLLKQ-------YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----KP 248 (328)
Q Consensus 180 ~~~~~~~~~~~~~~~~tralG~~~~~~-------~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii----~~ 248 (328)
.+. ..++++.+++||+|||..+|. .++++|++....+.+.+++||||||||||+|+++++.+++ ..
T Consensus 222 ~v~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~ 298 (365)
T PLN03145 222 YVY---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQE 298 (365)
T ss_pred cee---cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhc
Confidence 885 347788889999999987753 3678999999998877778899999999999999975554 44
Q ss_pred CCCHHHHHHHHHhhhhcCCCCcceeecccccccCCCeEEEEEeccC
Q 020272 249 IQDPEEAAQTTSPVSLFGSWPIKVVHPFLALHEHPFIATALLLFST 294 (328)
Q Consensus 249 ~~~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~DniTvivi~~~~ 294 (328)
..+|+++|+.|++.|+. ++..||+|+||++|.+
T Consensus 299 ~~~p~~aa~~Lv~~Al~-------------rgs~DNITvIVV~l~~ 331 (365)
T PLN03145 299 HNDPVMCSKELVDEALK-------------RKSGDNLAVVVVCFQS 331 (365)
T ss_pred CCCHHHHHHHHHHHHHh-------------CCCCCCEEEEEEEeec
Confidence 57899999999999987 5566999999999986
No 2
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-44 Score=317.54 Aligned_cols=242 Identities=28% Similarity=0.354 Sum_probs=206.5
Q ss_pred CCceEEEEEeCcCC-CCCCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCc-----hh-HHHH
Q 020272 29 NGKFSYGYASSPGK-RSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFI-----SD-TKSA 101 (328)
Q Consensus 29 ~~~~~~~~~s~~G~-r~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~-----~~-~~~~ 101 (328)
...+.+++.|+.|. |..|||++.+........ ..+++|||||||+.+|++|++.+++.|.+..... .. ..+.
T Consensus 5 ~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~ 83 (262)
T COG0631 5 ILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEEL 83 (262)
T ss_pred cceeeeeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Confidence 45678889999999 889999999876444444 5799999999999999999999999887643221 11 5789
Q ss_pred HHHHHHhhcHHHHhhhc--cCCCCCCceEEEEEEECCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhHHHHHHHhCC
Q 020272 102 IADAYSHTDSEFLKSEN--NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG 179 (328)
Q Consensus 102 l~~~~~~~~~~l~~~~~--~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e~~ri~~~~g 179 (328)
+.+++..++..+..... .....||||++++++.++++|+|||||||+|++++|+++++|.||++.+..+..++..+++
T Consensus 84 l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~ 163 (262)
T COG0631 84 LKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEE 163 (262)
T ss_pred HHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHH
Confidence 99999999999988753 4567799999999999999999999999999999999999999999999999986655544
Q ss_pred eEEeccceeecCccccccccCCccceeeeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhccCCCHHHHHHHH
Q 020272 180 FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAQTT 259 (328)
Q Consensus 180 ~~~~~~~~~~~~~~~~tralG~~~~~~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~~~~~~~~a~~L 259 (328)
.. .++..+++||+||+... ..|++....+.+. +++|||||||||.++++++.++++...++++++++|
T Consensus 164 ~~------~~~~~~~ltralG~~~~-----~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~l 231 (262)
T COG0631 164 AR------SHPRRNALTRALGDFDL-----LEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKL 231 (262)
T ss_pred HH------hCccchhhhhhcCCCcc-----cceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHH
Confidence 33 33555699999998654 6788888888885 999999999999999999999999889999999999
Q ss_pred HhhhhcCCCCcceeecccccccCCCeEEEEEeccCcc
Q 020272 260 SPVSLFGSWPIKVVHPFLALHEHPFIATALLLFSTWA 296 (328)
Q Consensus 260 ~~~A~~~~~~~~~~~~~~~~~~~DniTvivi~~~~~~ 296 (328)
++.|+. ++..||+|++++.+..+.
T Consensus 232 i~~a~~-------------~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 232 IELALE-------------GGGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHHHh-------------cCCCCceEEEEEEeeccc
Confidence 999997 566699999999998653
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.5e-42 Score=321.14 Aligned_cols=253 Identities=34% Similarity=0.497 Sum_probs=207.0
Q ss_pred CCCCCCCCCCcCccccCCCceEEEEEeCcCCCCCCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhC
Q 020272 12 SQVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRH 91 (328)
Q Consensus 12 ~~p~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~ 91 (328)
++|..+...... .+..+.+++.|++|.|+.|||++.+... ....+|+|||||||..+++++++.+.+.+.+.
T Consensus 6 ~~p~~~~~~~~~----~~~~~~~g~~s~~G~R~~nED~~~v~~~----~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~ 77 (381)
T PTZ00224 6 PKPVLSKLVDRA----GNSIFRCASACVNGYRESMEDAHLLYLT----DDWGFFGVFDGHVNDECSQYLARAWPQALEKE 77 (381)
T ss_pred CCCccccccccC----CCccEEEEEEeCCCCCCCCCCeeEeccC----CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhc
Confidence 445444443332 6788999999999999999999876332 23359999999999999999999998877543
Q ss_pred CCCchhHHHHHHHHHHhhcHHHHhhhccCCCCCCceEEEEEEE-CCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhH
Q 020272 92 PKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDE 170 (328)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~-~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e 170 (328)
... .....|++++..+|+.+.+... .+|||+++++|. +++++++||||||+|++|+|++++||+||++.++.|
T Consensus 78 ~~~--~~~~~l~~a~~~~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E 151 (381)
T PTZ00224 78 PEP--MTDERMEELCLEIDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGE 151 (381)
T ss_pred ccc--ccHHHHHHHHHHHHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHH
Confidence 322 1245588899999998875432 358999988886 579999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEEeccceeecCccccccccCCccce---------eeeecCCceeEEEecCCCcEEEEEcCCccc-CCCHH
Q 020272 171 RQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWD-VVTNE 240 (328)
Q Consensus 171 ~~ri~~~~g~~~~~~~~~~~~~~~~tralG~~~~~---------~~~~~~p~v~~~~~~~~~d~llL~SDGl~d-~l~~~ 240 (328)
..||.+.+|.+. .+|+++.+.++|+||+..+| +.++++|++....+.+ +|+|||||||||| +++++
T Consensus 152 ~~RI~~~gg~v~---~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~-~D~llLaSDGL~d~~ls~e 227 (381)
T PTZ00224 152 RQRIEACGGRVV---SNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQS-NDFIILACDGVFEGNFSNE 227 (381)
T ss_pred HhHHHHccCEec---cccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCC-CCEEEEECCCcCcCccCHH
Confidence 999999998875 35778889999999997654 2356889999887764 7899999999999 89999
Q ss_pred HHHHhhcc----CCCHHHHHHHHHhhhhcCCCCcceeecccccccCCCeEEEEEeccCc
Q 020272 241 EAVAMIKP----IQDPEEAAQTTSPVSLFGSWPIKVVHPFLALHEHPFIATALLLFSTW 295 (328)
Q Consensus 241 ei~~ii~~----~~~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~DniTvivi~~~~~ 295 (328)
|+.+++.. ..+++++|+.|+++|+. ++..||||+||+.|...
T Consensus 228 Ei~~iv~~~l~~~~~~~~aA~~Lv~~A~~-------------rGs~DNITvIvV~~~~~ 273 (381)
T PTZ00224 228 EVVAFVKEQLETCDDLAVVAGRVCDEAIR-------------RGSKDNISCLIVQLKDG 273 (381)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHh-------------cCCCCCEEEEEEEeeCC
Confidence 99999863 46899999999999987 55669999999999853
No 4
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-43 Score=296.15 Aligned_cols=262 Identities=33% Similarity=0.506 Sum_probs=226.9
Q ss_pred CCCCCCCCCcCccccCCCceEEEEEeCcCCCCCCCccEEEeec-CCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhC
Q 020272 13 QVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRID-GVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRH 91 (328)
Q Consensus 13 ~p~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~neDa~~~~~~-~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~ 91 (328)
+|.+.+....+ +-+.++||..|++|+|..|||++..... .....+..+|+|+|||.|+..+.++++.+++.+...
T Consensus 7 KPkteKhn~~G----~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~ss 82 (379)
T KOG0697|consen 7 KPKTEKHNAEG----EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISS 82 (379)
T ss_pred CcccccccccC----cCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhh
Confidence 56667777666 4588999999999999999999876433 233456779999999999999999999999988765
Q ss_pred CCCch--------hHHHHHHHHHHhhcHHHHhhh--ccCCCCCCceEEEEEEECCEEEEEEecccceEEEeCCeeEeeCC
Q 020272 92 PKFIS--------DTKSAIADAYSHTDSEFLKSE--NNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSR 161 (328)
Q Consensus 92 ~~~~~--------~~~~~l~~~~~~~~~~l~~~~--~~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~r~g~~~~lt~ 161 (328)
..+.. +...-++..|.+.++...... .....++|||++.+++....+|++|+||||++++|+|+...-|.
T Consensus 83 e~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~Tq 162 (379)
T KOG0697|consen 83 EEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQ 162 (379)
T ss_pred HHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEecc
Confidence 44433 567788888888887765542 22334489999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCeEEeccceeecCccccccccCCccce---------eeeecCCceeEEEecCCCcEEEEEcCC
Q 020272 162 DHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDG 232 (328)
Q Consensus 162 dh~~~~~~e~~ri~~~~g~~~~~~~~~~~~~~~~tralG~~~~~---------~~~~~~p~v~~~~~~~~~d~llL~SDG 232 (328)
||.+.++.|+.||..+||-+. ..|++|.++++|||||+.+| +.++++|++........++||||++||
T Consensus 163 DHKP~~p~EkeRIqnAGGSVM---IqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDG 239 (379)
T KOG0697|consen 163 DHKPYLPKEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDG 239 (379)
T ss_pred CCCCCChHHHHHHhcCCCeEE---EEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccc
Confidence 999999999999999999876 67999999999999999998 469999999999999888999999999
Q ss_pred cccCCCHHHHHHhhccC----CCHHHHHHHHHhhhhcCCCCcceeecccccccCCCeEEEEEeccC
Q 020272 233 LWDVVTNEEAVAMIKPI----QDPEEAAQTTSPVSLFGSWPIKVVHPFLALHEHPFIATALLLFST 294 (328)
Q Consensus 233 l~d~l~~~ei~~ii~~~----~~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~DniTvivi~~~~ 294 (328)
+||+++++|+.++++.. .+..++|..+++.++- .|.+||+|++++.|+.
T Consensus 240 IwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLh-------------KGSRDNMsivlvcfp~ 292 (379)
T KOG0697|consen 240 IWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLH-------------KGSRDNMSIVLVCFPG 292 (379)
T ss_pred hhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHh-------------ccCccCceEEEEecCC
Confidence 99999999999999764 7899999999999886 5566999999999985
No 5
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=305.52 Aligned_cols=251 Identities=48% Similarity=0.676 Sum_probs=217.2
Q ss_pred eEEEEEeCcCCCCCCCccEEEeecCC----CCc-eeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCch---hHHHHHH
Q 020272 32 FSYGYASSPGKRSSMEDFYETRIDGV----EGE-IVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFIS---DTKSAIA 103 (328)
Q Consensus 32 ~~~~~~s~~G~r~~neDa~~~~~~~~----~~~-~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~~---~~~~~l~ 103 (328)
...+.++.+|.|..|||++....... ... ...+|||||||||..+++++.+.++..+.+...... ....+++
T Consensus 40 ~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~ 119 (330)
T KOG0698|consen 40 RLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALR 119 (330)
T ss_pred cceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHH
Confidence 33455588888999999998755422 233 578999999999999999999999999988766655 3788999
Q ss_pred HHHH-hhcHHHHhhhccCCCCCCceEEEEEEECC-EEEEEEecccceEEEeCC-eeEeeCCCCCCCChhHHHHHHHhCCe
Q 020272 104 DAYS-HTDSEFLKSENNQNRDAGSTASTAILVGD-RLLVANVGDSRAVICRGG-NAIAVSRDHKPDQTDERQRIEDAGGF 180 (328)
Q Consensus 104 ~~~~-~~~~~l~~~~~~~~~~~gtT~~~~~i~~~-~l~~a~vGDSr~yl~r~g-~~~~lt~dh~~~~~~e~~ri~~~~g~ 180 (328)
++|. ..+..+... ......+|||++++++.++ ++|+||+||||+++++.| ..++||.||++..+.|..||...||.
T Consensus 120 ~~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~ 198 (330)
T KOG0698|consen 120 RAFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGR 198 (330)
T ss_pred HHHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCE
Confidence 9999 598888875 2223457888888888755 999999999999999865 89999999999999999999999999
Q ss_pred EEecc-ceeecCccccccccCCccce-eeeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhcc----CCCHHH
Q 020272 181 VMWAG-TWRVGGVLAVSRAFGDRLLK-QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEE 254 (328)
Q Consensus 181 ~~~~~-~~~~~~~~~~tralG~~~~~-~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~----~~~~~~ 254 (328)
+.... ..|++|.++++|+|||..+| +.++++|++....+...++||||+||||||+++++|+.++++. ..++..
T Consensus 199 v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~ 278 (330)
T KOG0698|consen 199 VSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLA 278 (330)
T ss_pred EEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHH
Confidence 98543 58999999999999999999 8999999999999998889999999999999999999999998 579999
Q ss_pred HHHHHHhhhhcCCCCcceeecccccccCCCeEEEEEeccCcc
Q 020272 255 AAQTTSPVSLFGSWPIKVVHPFLALHEHPFIATALLLFSTWA 296 (328)
Q Consensus 255 ~a~~L~~~A~~~~~~~~~~~~~~~~~~~DniTvivi~~~~~~ 296 (328)
++..|.+.|+. ++..|||||||+.|.++.
T Consensus 279 a~~~l~~~a~~-------------~~s~DnitvvvV~l~~~~ 307 (330)
T KOG0698|consen 279 AAKLLATEALS-------------RGSKDNITVVVVRLKSSP 307 (330)
T ss_pred HHHHHHHHHhh-------------cCCCCCeEEEEEEecCcc
Confidence 99999999876 666799999999999865
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=3.4e-42 Score=306.83 Aligned_cols=237 Identities=45% Similarity=0.666 Sum_probs=195.7
Q ss_pred EEEEEeCcCCCCCCCccEEEeecCC---CCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCch--hHHHHHHHHHH
Q 020272 33 SYGYASSPGKRSSMEDFYETRIDGV---EGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFIS--DTKSAIADAYS 107 (328)
Q Consensus 33 ~~~~~s~~G~r~~neDa~~~~~~~~---~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~~--~~~~~l~~~~~ 107 (328)
.+|+.+..|.|+.|||.+++..... ......+|+|+|||||..+++++++.+.+.+.+...... .+.+.|..+|.
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 4788999999999999999866442 356778999999999999999999999987765432222 57889999999
Q ss_pred h-hcHHHHhhhcc-CCCCCCceEEEEEEECCEEEEEEecccceEEEeCCeeE-eeCCCCCCCChhHHHHHHHhCCeEEec
Q 020272 108 H-TDSEFLKSENN-QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAI-AVSRDHKPDQTDERQRIEDAGGFVMWA 184 (328)
Q Consensus 108 ~-~~~~l~~~~~~-~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~r~g~~~-~lt~dh~~~~~~e~~ri~~~~g~~~~~ 184 (328)
. ++..+...... ....+|||+++++|.++++|+||+||||+|+++++... +||.||++.++.|..||.+.+|.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 8 77777763221 45568999999999999999999999999999999888 99999999999999999999999887
Q ss_pred cceeecCccccccccCCcccee----eeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhccCCC----HHHHH
Q 020272 185 GTWRVGGVLAVSRAFGDRLLKQ----YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQD----PEEAA 256 (328)
Q Consensus 185 ~~~~~~~~~~~tralG~~~~~~----~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~~~~----~~~~a 256 (328)
..|+.+.+++||+|||..+|+ .++++|++....+.+.+++||||||||||+|+++|+.+++.+..+ |+.+|
T Consensus 160 -~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a 238 (254)
T PF00481_consen 160 -NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAA 238 (254)
T ss_dssp -TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred -chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHH
Confidence 789999999999999999998 899999999999998767999999999999999999999988744 99999
Q ss_pred HHHHhhhhcCCCCcc
Q 020272 257 QTTSPVSLFGSWPIK 271 (328)
Q Consensus 257 ~~L~~~A~~~~~~~~ 271 (328)
+.|+++|+..++.||
T Consensus 239 ~~L~~~A~~~gs~DN 253 (254)
T PF00481_consen 239 EKLVDEAIARGSKDN 253 (254)
T ss_dssp HHHHHHHHHTTHHSH
T ss_pred HHHHHHHHhcCCCCC
Confidence 999999998665543
No 7
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.3e-38 Score=283.12 Aligned_cols=243 Identities=42% Similarity=0.629 Sum_probs=208.3
Q ss_pred EEEEEeCcCCCCCCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCC-----chhHHHHHHHHHH
Q 020272 33 SYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF-----ISDTKSAIADAYS 107 (328)
Q Consensus 33 ~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~-----~~~~~~~l~~~~~ 107 (328)
.+++.+..|.|+.|||++.+...... ....+|+|||||||+..+++|++.+.+.+.+.... ...+...|+.++.
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 80 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFL 80 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 56778888889999999988544321 23469999999999999999999999988765433 2456788999999
Q ss_pred hhcHHHHhhhc--cCCCCCCceEEEEEEECCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhHHHHHHHhCCeEEecc
Q 020272 108 HTDSEFLKSEN--NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAG 185 (328)
Q Consensus 108 ~~~~~l~~~~~--~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e~~ri~~~~g~~~~~~ 185 (328)
.+++.+..... .....+|||++++++.+++++++|+||||+|++++++++++|.||++.+..+..|+.+.++.+.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~--- 157 (254)
T cd00143 81 RADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS--- 157 (254)
T ss_pred HHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE---
Confidence 99999887643 3455689999999999999999999999999999999999999999999888899999888654
Q ss_pred ceeecCccccccccCCccceeeeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhccCC---CHHHHHHHHHhh
Q 020272 186 TWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ---DPEEAAQTTSPV 262 (328)
Q Consensus 186 ~~~~~~~~~~tralG~~~~~~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~~~---~~~~~a~~L~~~ 262 (328)
..+.++...++|++|+..+++....+|++....+.+++++|||||||||+++++++|.+++.... +++++|+.|++.
T Consensus 158 ~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~ 237 (254)
T cd00143 158 NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDL 237 (254)
T ss_pred eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHH
Confidence 35667788999999998888778899999998886668999999999999999999999998876 899999999999
Q ss_pred hhcCCCCcceeecccccccCCCeEEEEEec
Q 020272 263 SLFGSWPIKVVHPFLALHEHPFIATALLLF 292 (328)
Q Consensus 263 A~~~~~~~~~~~~~~~~~~~DniTvivi~~ 292 (328)
|.. .+..||+|+|++.|
T Consensus 238 a~~-------------~~~~Dn~t~i~~~~ 254 (254)
T cd00143 238 ALR-------------RGSHDNITVVVVRL 254 (254)
T ss_pred HHh-------------CCCCCCEEEEEEeC
Confidence 986 34669999999875
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=6.1e-38 Score=279.25 Aligned_cols=243 Identities=44% Similarity=0.676 Sum_probs=208.8
Q ss_pred CceEEEEEeCcCCCCCCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCc----hhHHHHHHHH
Q 020272 30 GKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFI----SDTKSAIADA 105 (328)
Q Consensus 30 ~~~~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~----~~~~~~l~~~ 105 (328)
..+.+++.+..|.|..|||++++.... .....+++|||||||..+++++++.+.+.+.+..... ..+...|+++
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~--~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDL--SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKA 81 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccC--CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHH
Confidence 447788888888899999999886432 1345699999999999999999999999887754333 2478889999
Q ss_pred HHhhcHHHHhhhcc--CCCCCCceEEEEEEECCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhHHHHHHHhCCeEEe
Q 020272 106 YSHTDSEFLKSENN--QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW 183 (328)
Q Consensus 106 ~~~~~~~l~~~~~~--~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e~~ri~~~~g~~~~ 183 (328)
+..++..+...... ....+|||++++++..++++++|+||||+|+++++++.++|.||++.+..+..++...++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~ 161 (255)
T smart00332 82 FLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVIN 161 (255)
T ss_pred HHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEEC
Confidence 99999998776443 2356899999999999999999999999999999999999999999999999999999887642
Q ss_pred ccceeecCccccccccCCccceeeeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhccCC---CHHHHHHHHH
Q 020272 184 AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ---DPEEAAQTTS 260 (328)
Q Consensus 184 ~~~~~~~~~~~~tralG~~~~~~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~~~---~~~~~a~~L~ 260 (328)
.++++.+.++|++|+..+++.+..+|++....+.+++++|||||||||++++++++.+++.... ++.++|+.|+
T Consensus 162 ---~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~ 238 (255)
T smart00332 162 ---GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLI 238 (255)
T ss_pred ---CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 3677788999999999888889999999988875668999999999999999999999998875 6999999999
Q ss_pred hhhhcCCCCcceeecccccccCCCeEEEEE
Q 020272 261 PVSLFGSWPIKVVHPFLALHEHPFIATALL 290 (328)
Q Consensus 261 ~~A~~~~~~~~~~~~~~~~~~~DniTvivi 290 (328)
+.|.. .+..||+|++++
T Consensus 239 ~~a~~-------------~~~~Dn~T~ivv 255 (255)
T smart00332 239 DLALA-------------RGSKDNITVIVV 255 (255)
T ss_pred HHHHH-------------cCCCCCeEEEEC
Confidence 99986 456799999985
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=2.1e-38 Score=308.75 Aligned_cols=240 Identities=20% Similarity=0.250 Sum_probs=183.9
Q ss_pred CceEEEEEeCcCC-CCCCCccEEEeecC-----CCC---ceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCC----CCch
Q 020272 30 GKFSYGYASSPGK-RSSMEDFYETRIDG-----VEG---EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHP----KFIS 96 (328)
Q Consensus 30 ~~~~~~~~s~~G~-r~~neDa~~~~~~~-----~~~---~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~----~~~~ 96 (328)
..+.+++.|++|. |+.|||++.+.... ... ....+|+|||||||+.+|++||+.+++.|.+.. ....
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 3588999999998 99999998764321 011 124589999999999999999888888765421 1111
Q ss_pred hHHHHHHHHHHhhcHHHHhhhcc----CCCCCCceEEEEEEECCEEEEEEecccceEEE-eCCeeEeeCCCCCCCChhHH
Q 020272 97 DTKSAIADAYSHTDSEFLKSENN----QNRDAGSTASTAILVGDRLLVANVGDSRAVIC-RGGNAIAVSRDHKPDQTDER 171 (328)
Q Consensus 97 ~~~~~l~~~~~~~~~~l~~~~~~----~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~-r~g~~~~lt~dh~~~~~~e~ 171 (328)
.....+++++..+|+.+.+.... ....||||++++++.++++|++||||||+|++ ++|++++||+||++.+.+..
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~ 532 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQ 532 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHH
Confidence 23567899999999999775321 34569999999999999999999999999998 57899999999998765544
Q ss_pred HHHHHhCCeEEeccceeecCccccccccCCccceeeeecCCceeEEEecCCCcEEEEEcCCcccC--CCH---HHHHHhh
Q 020272 172 QRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDV--VTN---EEAVAMI 246 (328)
Q Consensus 172 ~ri~~~~g~~~~~~~~~~~~~~~~tralG~~~~~~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~--l~~---~ei~~ii 246 (328)
.++ .......+++.+.+||+||+...+. .+|++..+.+.+ +++||||||||||+ +.. +++..++
T Consensus 533 ~Gi-------~~~~a~~~p~~~~LTrALG~~~~~~---l~Pdi~~~~L~~-gD~lLLCSDGL~D~~~ve~~~~~~l~~il 601 (645)
T PRK14559 533 RGV-------EPQIAYARPDAYQLTQALGPRDNSA---IQPDIQFLEIEE-DTLLLLCSDGLSDNDLLETHWQTHLLPLL 601 (645)
T ss_pred hCC-------CHHHHhcCcccceeeeccCCCCCCc---ccceEEEEEcCC-CCEEEEECCCCCCCcccchHHHHHHHHHH
Confidence 432 1122233456789999999754332 478888877765 79999999999994 554 4566777
Q ss_pred ccCCCHHHHHHHHHhhhhcCCCCcceeecccccccCCCeEEEEEecc
Q 020272 247 KPIQDPEEAAQTTSPVSLFGSWPIKVVHPFLALHEHPFIATALLLFS 293 (328)
Q Consensus 247 ~~~~~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~DniTvivi~~~ 293 (328)
....++++++++|++.|+. ++.+||+|+||+.+.
T Consensus 602 ~~~~~l~~aa~~Li~~Al~-------------~gg~DNITvIvV~l~ 635 (645)
T PRK14559 602 SSSANLDQGLNKLIDLANQ-------------YNGHDNITAILVRLK 635 (645)
T ss_pred hcCCCHHHHHHHHHHHHHH-------------cCCCCcEEEEEEEec
Confidence 7778999999999999986 556699999999986
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=264.98 Aligned_cols=162 Identities=35% Similarity=0.529 Sum_probs=146.0
Q ss_pred CCceEEEEEEECCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhHHHHHHHhCCeEEeccceeecCccccccccCCcc
Q 020272 124 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRL 203 (328)
Q Consensus 124 ~gtT~~~~~i~~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e~~ri~~~~g~~~~~~~~~~~~~~~~tralG~~~ 203 (328)
+|||+++|++.++++++||.||||+++.|+|+.+-++.||.+..+.|..||..+||.++.. .|++|.++++|+|||+.
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlD--GRVNGGLNLSRA~GDHa 407 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLD--GRVNGGLNLSRAFGDHA 407 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeec--ceecCccchhhhhhhhh
Confidence 8999999999999999999999999999999999999999999999999999999999865 48999999999999999
Q ss_pred ce---------eeeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhcc----CCCHHHHHHHHHhhhhcCCCCc
Q 020272 204 LK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAQTTSPVSLFGSWPI 270 (328)
Q Consensus 204 ~~---------~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~----~~~~~~~a~~L~~~A~~~~~~~ 270 (328)
|| +.+++-|+|....+.++++|+||++||||++++.+|+.++++. .....++|+.|.+.++.-...
T Consensus 408 YK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~- 486 (542)
T KOG0699|consen 408 YKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTD- 486 (542)
T ss_pred hhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCC-
Confidence 98 3589999999999999999999999999999999999987753 467788999999999853321
Q ss_pred ceeecccccccCCCeEEEEEeccC
Q 020272 271 KVVHPFLALHEHPFIATALLLFST 294 (328)
Q Consensus 271 ~~~~~~~~~~~~DniTvivi~~~~ 294 (328)
-.+-.-||+|+|++.|..
T Consensus 487 ------GDGTGCDNMT~ii~~Fkr 504 (542)
T KOG0699|consen 487 ------GDGTGCDNMTVIITTFKR 504 (542)
T ss_pred ------CCCcCCCcceEEEEEecc
Confidence 125567999999999983
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.98 E-value=2.5e-31 Score=239.29 Aligned_cols=221 Identities=35% Similarity=0.569 Sum_probs=179.0
Q ss_pred CCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhC------------C--------------------
Q 020272 45 SMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRH------------P-------------------- 92 (328)
Q Consensus 45 ~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~------------~-------------------- 92 (328)
.-||.+.+.... .....++||+|||||..++++.++.+..++..+ .
T Consensus 84 ~~edrv~~~~s~--~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~ 161 (390)
T KOG0700|consen 84 AEEDRVSVAVSE--ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSS 161 (390)
T ss_pred cccCcceeeeec--cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccc
Confidence 345554443321 234569999999999999999999999877611 0
Q ss_pred --CCchhHHHHHHHHHHhhcHHHHhh------hccCCCCCCceEEEEEEECCEEEEEEecccceEEEe---CC---eeEe
Q 020272 93 --KFISDTKSAIADAYSHTDSEFLKS------ENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICR---GG---NAIA 158 (328)
Q Consensus 93 --~~~~~~~~~l~~~~~~~~~~l~~~------~~~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~r---~g---~~~~ 158 (328)
.....+.++|.+||.++.+.+... ..+....+|+|+++.++.++.+|+||+|||||++.+ ++ ...|
T Consensus 162 ~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~q 241 (390)
T KOG0700|consen 162 ADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQ 241 (390)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEe
Confidence 003457889999999999998764 234455689999999999999999999999999964 33 4799
Q ss_pred eCCCCCCCChhHHHHHHHhCCe---EEeccceeecCccccccccCCccce---------------------eeeecCCce
Q 020272 159 VSRDHKPDQTDERQRIEDAGGF---VMWAGTWRVGGVLAVSRAFGDRLLK---------------------QYVVADPEI 214 (328)
Q Consensus 159 lt~dh~~~~~~e~~ri~~~~g~---~~~~~~~~~~~~~~~tralG~~~~~---------------------~~~~~~p~v 214 (328)
||.||+..++.|..||+..+-. +...+..|+.|.+.++|||||..+| |+++++|.+
T Consensus 242 LS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i 321 (390)
T KOG0700|consen 242 LSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSI 321 (390)
T ss_pred cChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceE
Confidence 9999999999999999987742 3333346999999999999998777 679999999
Q ss_pred eEEEecCCCcEEEEEcCCcccCCCHHHHHHhhccC----CCHHHHHHHHHhhhhcCC
Q 020272 215 QEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI----QDPEEAAQTTSPVSLFGS 267 (328)
Q Consensus 215 ~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~~----~~~~~~a~~L~~~A~~~~ 267 (328)
..+.+.+.+.||||+|||||++|+++|+.+++... ..-+.+|+.|++.|+.+.
T Consensus 322 ~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 322 THHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred EEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999874 234678999999998543
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-25 Score=194.43 Aligned_cols=233 Identities=26% Similarity=0.351 Sum_probs=181.3
Q ss_pred eeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCC--------------------------------------C--chhHHH
Q 020272 61 IVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPK--------------------------------------F--ISDTKS 100 (328)
Q Consensus 61 ~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~--------------------------------------~--~~~~~~ 100 (328)
...+|.+||||.|..++-+|++.+.+.+.+... . ..-...
T Consensus 143 ~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LViG 222 (493)
T KOG1323|consen 143 DGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVIG 222 (493)
T ss_pred cceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhHH
Confidence 567999999999999999999888776543110 0 011567
Q ss_pred HHHHHHHhhcHHHHhhhccCCCCCCceEEEEEEECCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhHHHHHHHhCC-
Q 020272 101 AIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG- 179 (328)
Q Consensus 101 ~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e~~ri~~~~g- 179 (328)
+|..||+.++.++..........+|||+.+++..-+++|++|.||||++++|+++++.|+++-++.. |.+|++...-
T Consensus 223 AlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ~Laf~ 300 (493)
T KOG1323|consen 223 ALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQELAFR 300 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHHHHhhc
Confidence 7899999999998887766677789999999999999999999999999999999999999988754 5555544211
Q ss_pred -------eEE--------------------------------------------eccceeecCccccccccCCccce---
Q 020272 180 -------FVM--------------------------------------------WAGTWRVGGVLAVSRAFGDRLLK--- 205 (328)
Q Consensus 180 -------~~~--------------------------------------------~~~~~~~~~~~~~tralG~~~~~--- 205 (328)
..+ .....|+-+.+.++|.+||+.++
T Consensus 301 ~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~d 380 (493)
T KOG1323|consen 301 NPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVVD 380 (493)
T ss_pred ChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeeec
Confidence 110 11122333568899999998765
Q ss_pred ------eeeecCCceeEEEec----CCCcEEEEEcCCcccCCCHHHHHHhhccC------CCH---HHHHHHHHhhhhcC
Q 020272 206 ------QYVVADPEIQEEVID----SSLEFLILASDGLWDVVTNEEAVAMIKPI------QDP---EEAAQTTSPVSLFG 266 (328)
Q Consensus 206 ------~~~~~~p~v~~~~~~----~~~d~llL~SDGl~d~l~~~ei~~ii~~~------~~~---~~~a~~L~~~A~~~ 266 (328)
|++++.|++.+..+. ..+|.+||+|||+||+++++|+..+++.. .+| ..+|+.|+..|.-.
T Consensus 381 snl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg~ 460 (493)
T KOG1323|consen 381 SNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARGQ 460 (493)
T ss_pred CCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcCc
Confidence 779999999998876 45689999999999999999999998764 333 45678888888765
Q ss_pred CCCcceeecccccccCCCeEEEEEeccCc
Q 020272 267 SWPIKVVHPFLALHEHPFIATALLLFSTW 295 (328)
Q Consensus 267 ~~~~~~~~~~~~~~~~DniTvivi~~~~~ 295 (328)
..+.++..+--+.+..|||||.||-+...
T Consensus 461 ~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 461 QKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred cCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 56667777777788999999999988653
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=3.2e-24 Score=187.39 Aligned_cols=213 Identities=23% Similarity=0.220 Sum_probs=148.2
Q ss_pred CCCCccEEEeecCCCCceeEEEEEEcCCChHHHHH----HHHHHHHHH----HHhCCCCchhHHHHHHHHHHhhcHHHHh
Q 020272 44 SSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAE----YVKHNLFSN----LIRHPKFISDTKSAIADAYSHTDSEFLK 115 (328)
Q Consensus 44 ~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~----~as~~~~~~----l~~~~~~~~~~~~~l~~~~~~~~~~l~~ 115 (328)
+.-||+|++..+. ...+.|||||+|||.--. ..++.++.. +.+......++..+|..++.+. ..
T Consensus 89 ~~GEDa~Fvss~~----~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l----~~ 160 (330)
T KOG1379|consen 89 KGGEDAWFVSSNP----HAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAEL----KS 160 (330)
T ss_pred CCCCcceeeccCc----ccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHH----hh
Confidence 4568999986542 224999999999986322 334444333 2333344457888888877654 22
Q ss_pred hhccCCCCCCceEEEEEEE--CCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhHHHHHHHhCCeEEeccceeecCcc
Q 020272 116 SENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVL 193 (328)
Q Consensus 116 ~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e~~ri~~~~g~~~~~~~~~~~~~~ 193 (328)
. +...-++||++++.++ +++||++|+|||.+.++|+|++..-|..+.+.-.. +..+
T Consensus 161 ~--~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~--------------------PyQL 218 (330)
T KOG1379|consen 161 Q--KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNT--------------------PYQL 218 (330)
T ss_pred c--CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCC--------------------ceee
Confidence 2 1222367899999898 88999999999999999999999999887654211 1111
Q ss_pred ccccccCCccceeeeecCC---ceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhccC-----CCHHHHHHHHHhhhhc
Q 020272 194 AVSRAFGDRLLKQYVVADP---EIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI-----QDPEEAAQTTSPVSLF 265 (328)
Q Consensus 194 ~~tralG~~~~~~~~~~~p---~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~~-----~~~~~~a~~L~~~A~~ 265 (328)
.+ +-..+..++...| +...+.+ +++|.|||+||||||+|.+++|.+++... .+++..|++|++.|..
T Consensus 219 s~----~p~~~~~~~~d~p~~ad~~~~~v-~~GDvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ 293 (330)
T KOG1379|consen 219 SS----PPEGYSSYISDVPDSADVTSFDV-QKGDVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARE 293 (330)
T ss_pred cc----CCccccccccCCccccceEEEec-cCCCEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHH
Confidence 11 1111111222333 3333433 45899999999999999999999998653 6899999999999998
Q ss_pred CCCCcceeeccc----------ccccCCCeEEEEEe
Q 020272 266 GSWPIKVVHPFL----------ALHEHPFIATALLL 291 (328)
Q Consensus 266 ~~~~~~~~~~~~----------~~~~~DniTvivi~ 291 (328)
.+-+.+.-+||. .+|+.||||++|..
T Consensus 294 ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~ 329 (330)
T KOG1379|consen 294 LSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSS 329 (330)
T ss_pred hccCcCcCChHHHHHHHhCcccCCCCcccEEEEEec
Confidence 888888877774 46789999999864
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.86 E-value=3.6e-21 Score=166.77 Aligned_cols=178 Identities=24% Similarity=0.353 Sum_probs=96.9
Q ss_pred EeCcCCCCCCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHH----HHHHHHHhCCCCchh--HHHHHHHHHHhhc
Q 020272 37 ASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKH----NLFSNLIRHPKFISD--TKSAIADAYSHTD 110 (328)
Q Consensus 37 ~s~~G~r~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~----~~~~~l~~~~~~~~~--~~~~l~~~~~~~~ 110 (328)
.++.|.++.|||++.+...... .+++||||+||...++.+++ .+.+.+.+....... ....++.+...+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~~~~----~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTDDDG----NLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEIL 78 (212)
T ss_dssp ----TTSSS--EEEEEE-TCCT----CEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeCCCC----EEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 5789999999999986544222 37799999996665555555 444555555544332 2233333333333
Q ss_pred HHH-----HhhhccCCCCCCceEEEEEEECCEEEEEEecccceEE-EeCCeeEeeCCCCCCCChhHHHHHHHhCCeEEec
Q 020272 111 SEF-----LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVI-CRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA 184 (328)
Q Consensus 111 ~~l-----~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~yl-~r~g~~~~lt~dh~~~~~~e~~ri~~~~g~~~~~ 184 (328)
..+ ..........++||++++++.+++++++|+||||+|+ .++|++..++.+|+.. ..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~----~~------------ 142 (212)
T PF13672_consen 79 SIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGE----YP------------ 142 (212)
T ss_dssp HHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHH----HH------------
T ss_pred HHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccch----hh------------
Confidence 221 1112335556899999999999999999999999975 5799999999999621 11
Q ss_pred cceeecCccccccccCCccceeeeecCCceeEEEec-CCCcEEEEEcCCcccCCCHHH-HHHhhccC
Q 020272 185 GTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVID-SSLEFLILASDGLWDVVTNEE-AVAMIKPI 249 (328)
Q Consensus 185 ~~~~~~~~~~~tralG~~~~~~~~~~~p~v~~~~~~-~~~d~llL~SDGl~d~l~~~e-i~~ii~~~ 249 (328)
..+..+... .+.+.+....+. .+++.|||||||||+.+...+ +..++...
T Consensus 143 ---------~~~~~~~~~------~~~~~~~~~~~~~~~~d~ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 143 ---------NQTRSLTGD------DPEPDVQYGSIPLEEGDVILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp ---------HCTTSCCHH------CCCTETEEEEEE--TT-EEEEE-HHHHTTS-HHHHHHHH----
T ss_pred ---------hhhhccCcc------ccccCCeEEEEEcCCCCEEEEECcCccccCCCHHHHHHHhhhc
Confidence 012222211 123333444343 457999999999999998655 66776554
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.82 E-value=9.1e-20 Score=178.65 Aligned_cols=245 Identities=22% Similarity=0.354 Sum_probs=202.1
Q ss_pred CCceEEEEEeCcCCCCCCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHh
Q 020272 29 NGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSH 108 (328)
Q Consensus 29 ~~~~~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~ 108 (328)
..-|.+|++...|.|..+--+......+..+ ...+|+++||-+......+....+.+.+.++.....+-.+.|+.+|..
T Consensus 519 ~~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~~-~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~ 597 (1081)
T KOG0618|consen 519 AFLWTYGVAGVSGQRNKVCSRAVWVENFFLN-PQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLR 597 (1081)
T ss_pred eeheeeccchhcccccchhhhhhhhhhcccC-CcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 3457799999999977665443322222222 224999999999999998888888888887665555556669999999
Q ss_pred hcHHHHhhhccCCCCCCceEEEEEEECC--------EEEEEEecccceEEEeCCeeEeeCCCCCCC-ChhHHHHHHHhCC
Q 020272 109 TDSEFLKSENNQNRDAGSTASTAILVGD--------RLLVANVGDSRAVICRGGNAIAVSRDHKPD-QTDERQRIEDAGG 179 (328)
Q Consensus 109 ~~~~l~~~~~~~~~~~gtT~~~~~i~~~--------~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~-~~~e~~ri~~~~g 179 (328)
.++++...+.. .|..++.+.|..+ ++++||+|+|.++++++|+-.++|+-.... .+.|.+|+...+|
T Consensus 598 ~~rklg~~g~~----lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g 673 (1081)
T KOG0618|consen 598 LNRKLGEEGQV----LGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKG 673 (1081)
T ss_pred Hhhhhhhhhcc----ccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcC
Confidence 99998654443 4666666777644 689999999999999999999988876544 7889999999999
Q ss_pred eEEeccceeecCccccccccCCccceeeeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhccCCCHHHHHHHH
Q 020272 180 FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAQTT 259 (328)
Q Consensus 180 ~~~~~~~~~~~~~~~~tralG~~~~~~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~~~~~~~~a~~L 259 (328)
++.. .++++|....||++|...+.|.+.+.|++....+.+.+++|||++-++|++|+-+++.+.+++..+|-.+|++|
T Consensus 674 ~i~e--d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL 751 (1081)
T KOG0618|consen 674 FITE--DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKL 751 (1081)
T ss_pred eecC--CCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHH
Confidence 9985 57888999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred HhhhhcCCCCcceeecccccccCCCeEEEEEecc
Q 020272 260 SPVSLFGSWPIKVVHPFLALHEHPFIATALLLFS 293 (328)
Q Consensus 260 ~~~A~~~~~~~~~~~~~~~~~~~DniTvivi~~~ 293 (328)
.+.|..+|. .||++++|+.|.
T Consensus 752 ~d~AqSYgc-------------~~nv~vlVv~l~ 772 (1081)
T KOG0618|consen 752 CDLAQSYGC-------------AENVSVLVVRLN 772 (1081)
T ss_pred HHHHHhccc-------------ccCeeEEEEEee
Confidence 999998554 477777777664
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.76 E-value=9.4e-17 Score=137.03 Aligned_cols=183 Identities=19% Similarity=0.148 Sum_probs=126.6
Q ss_pred EEEEEeCcCCCCCCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHhhcHH
Q 020272 33 SYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSE 112 (328)
Q Consensus 33 ~~~~~s~~G~r~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 112 (328)
.+.....++. ...-|.+.+..... ...+++|+||||+...+.+++..+...+.+....... +.+.+..+|+.
T Consensus 5 ~~~~~~~p~~-~~~GD~~~~~~~~~---~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~----~~~~l~~~n~~ 76 (193)
T smart00331 5 LIAQYYEDAT-QVGGDFYDVVKLPE---GRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGIS----LSQILERLNRA 76 (193)
T ss_pred EEEEEEcchH-hcCccEEEEEEeCC---CeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCC----HHHHHHHHHHH
Confidence 3444444443 56778887644332 2468999999998888889999888888664433222 44455556666
Q ss_pred HHhhhccCCCCCCceEEEEEE--ECCEEEEEEecccceEEEe-CCeeEeeCCCCCCCChhHHHHHHHhCCeEEeccceee
Q 020272 113 FLKSENNQNRDAGSTASTAIL--VGDRLLVANVGDSRAVICR-GGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRV 189 (328)
Q Consensus 113 l~~~~~~~~~~~gtT~~~~~i--~~~~l~~a~vGDSr~yl~r-~g~~~~lt~dh~~~~~~e~~ri~~~~g~~~~~~~~~~ 189 (328)
+... ....+++|++++++ ..++++++|+||+|+|+++ ++...+++.+.+
T Consensus 77 l~~~---~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~------------------------- 128 (193)
T smart00331 77 IYEN---GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG------------------------- 128 (193)
T ss_pred HHhc---CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC-------------------------
Confidence 6554 22347999999998 5789999999999999999 666555554422
Q ss_pred cCccccccccCCccceeeeecCCceeEEEecCCCcEEEEEcCCcccCCCHHHHHHhhccC--CCHHHHHHHHHhhhh
Q 020272 190 GGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI--QDPEEAAQTTSPVSL 264 (328)
Q Consensus 190 ~~~~~~tralG~~~~~~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~ei~~ii~~~--~~~~~~a~~L~~~A~ 264 (328)
+.+|... ..+++.....+. ++|.|+|+|||||+.+..+++.+++.+. .++++.++++++.+.
T Consensus 129 -------~~lG~~~-----~~~~~~~~~~l~-~gd~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 129 -------APLGLEP-----DVEVDVRELTLE-PGDLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred -------ceeeeCC-----CCcceeEEEeeC-CCCEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 2333211 012344444444 4799999999999999999999999876 468998998888753
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.68 E-value=2.1e-15 Score=152.42 Aligned_cols=204 Identities=17% Similarity=0.100 Sum_probs=136.4
Q ss_pred CceEEEEEeC-cCCCCCCCccEEEeecCCCCceeEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHh
Q 020272 30 GKFSYGYASS-PGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSH 108 (328)
Q Consensus 30 ~~~~~~~~s~-~G~r~~neDa~~~~~~~~~~~~~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~ 108 (328)
.++.+|.+.. ++.+..+.|.+.+..... ...+++|+||+|+...|..++..+.+.+.+......+ ...++..
T Consensus 550 ~~~~~g~a~~~k~g~~vsGD~y~~~~l~~---g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~ 622 (764)
T TIGR02865 550 YHVSTGVARAAKDGELVSGDSYSFGKLSA---GKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKT 622 (764)
T ss_pred eeehhhHHHhcCCCCcccCceEEEEEECC---CEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHH
Confidence 3344444433 344788999987644322 2258999999997776667777776666432211111 2445566
Q ss_pred hcHHHHhhhccCCCCCCceEEEEEEE--CCEEEEEEecccceEEEeCCeeEeeCCCCCCCChhHHHHHHHhCCeEEeccc
Q 020272 109 TDSEFLKSENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGT 186 (328)
Q Consensus 109 ~~~~l~~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDSr~yl~r~g~~~~lt~dh~~~~~~e~~ri~~~~g~~~~~~~ 186 (328)
+|+.+.... ...+.+|+.+++++ .+++.++++|+++.|+.|++++..++..+.+
T Consensus 623 lN~~L~~~~---~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP--------------------- 678 (764)
T TIGR02865 623 VNSILSLRS---TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP--------------------- 678 (764)
T ss_pred HHHHHHhCC---CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---------------------
Confidence 666654431 22367999999986 6899999999999999999998888654322
Q ss_pred eeecCccccccccCCccceeeeecCCceeEEEecCCCcEEEEEcCCcccCCCHHH-----HHHhhccC--CCHHHHHHHH
Q 020272 187 WRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEE-----AVAMIKPI--QDPEEAAQTT 259 (328)
Q Consensus 187 ~~~~~~~~~tralG~~~~~~~~~~~p~v~~~~~~~~~d~llL~SDGl~d~l~~~e-----i~~ii~~~--~~~~~~a~~L 259 (328)
+|-. -..+++.....+ .+||+|||+|||++|..++.+ +.+++++. .+|++.++.|
T Consensus 679 ------------lGil-----~~~~~~~~~~~L-~~GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~I 740 (764)
T TIGR02865 679 ------------IGIL-----DEVDVELVRKKL-KNGDLIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYL 740 (764)
T ss_pred ------------eEec-----cCCccceEEEEe-CCCCEEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 1100 002333344444 448999999999999887543 77777653 6899999999
Q ss_pred HhhhhcCCCCcceeecccccccCCCeEEEEEec
Q 020272 260 SPVSLFGSWPIKVVHPFLALHEHPFIATALLLF 292 (328)
Q Consensus 260 ~~~A~~~~~~~~~~~~~~~~~~~DniTvivi~~ 292 (328)
++.++... .+...||+|++++.+
T Consensus 741 l~~a~~~~----------~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 741 LEKAKELR----------SGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHhc----------CCCCCCCeEEEEEEe
Confidence 99997521 233579999999876
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.52 E-value=1.2e-12 Score=111.41 Aligned_cols=176 Identities=18% Similarity=0.152 Sum_probs=110.6
Q ss_pred eEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHhhcHHHHhhhccCCCCCCceEEEEEEE--CCEEE
Q 020272 62 VGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV--GDRLL 139 (328)
Q Consensus 62 ~~l~~VaDG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~--~~~l~ 139 (328)
.++++|+|++|....|.+.+..+...+........+ ..+.+..+|+.+....... ...+|++++.+. .++++
T Consensus 4 ~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l~ 77 (193)
T PF07228_consen 4 RYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTLT 77 (193)
T ss_dssp EEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEEE
T ss_pred EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEEE
Confidence 358999999995555556555555554332211122 3444555555553332221 357888888876 56899
Q ss_pred EEEecccceEEEeC--CeeEeeCCCCCCCChhHHHHHHHhCCeEEeccceeecCccccccccCCccceeeeecCCceeEE
Q 020272 140 VANVGDSRAVICRG--GNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEE 217 (328)
Q Consensus 140 ~a~vGDSr~yl~r~--g~~~~lt~dh~~~~~~e~~ri~~~~g~~~~~~~~~~~~~~~~tralG~~~~~~~~~~~p~v~~~ 217 (328)
++|+|+++++++++ +....+.....+ +|- ....++...
T Consensus 78 ~~~aG~~~~l~~~~~~~~~~~~~~~~~~---------------------------------lG~-------~~~~~~~~~ 117 (193)
T PF07228_consen 78 YANAGHPPPLLLRPGGREIEQLESEGPP---------------------------------LGI-------FEDIDYQEQ 117 (193)
T ss_dssp EEEESSSEEEEEETTCTEEEEETCSSBB---------------------------------CSS-------SCTTCEEEE
T ss_pred EeCCCCCCEEEEeccccceeecccCccc---------------------------------eee-------eccccccce
Confidence 99999999999998 444444332221 231 012333333
Q ss_pred Eec-CCCcEEEEEcCCcccCCCHH-------HHHHhhcc--CCCHHHHHHHHHhhhhcCCCCcceeecccccccCCCeEE
Q 020272 218 VID-SSLEFLILASDGLWDVVTNE-------EAVAMIKP--IQDPEEAAQTTSPVSLFGSWPIKVVHPFLALHEHPFIAT 287 (328)
Q Consensus 218 ~~~-~~~d~llL~SDGl~d~l~~~-------ei~~ii~~--~~~~~~~a~~L~~~A~~~~~~~~~~~~~~~~~~~DniTv 287 (328)
.+. +++|.|+|+||||+|....+ ++.+++.+ ..++++.++.|++.+.. .-.....||+|+
T Consensus 118 ~~~l~~gd~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~----------~~~~~~~DD~tv 187 (193)
T PF07228_consen 118 EIQLEPGDRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDR----------FGKGPLRDDITV 187 (193)
T ss_dssp EEE--TTEEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHH----------HTTSSTSS-EEE
T ss_pred EEEeccccEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHH----------hcCCCCCCceEE
Confidence 333 45899999999999998543 33566663 37899999999999875 223568899999
Q ss_pred EEEecc
Q 020272 288 ALLLFS 293 (328)
Q Consensus 288 ivi~~~ 293 (328)
+++.++
T Consensus 188 l~~~~~ 193 (193)
T PF07228_consen 188 LVIRRQ 193 (193)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999763
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.22 E-value=0.00016 Score=67.88 Aligned_cols=186 Identities=17% Similarity=0.082 Sum_probs=110.9
Q ss_pred CCCccEEEeecCCCCceeEEEEEEcCCC-hHHHHHHHHHHHHHHHHhCCCC-chhHHHHHHHHHHhhcHHHHhhhccCCC
Q 020272 45 SMEDFYETRIDGVEGEIVGLFGVFDGHG-GARAAEYVKHNLFSNLIRHPKF-ISDTKSAIADAYSHTDSEFLKSENNQNR 122 (328)
Q Consensus 45 ~neDa~~~~~~~~~~~~~~l~~VaDG~G-G~~~~~~as~~~~~~l~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 122 (328)
..-|.|-+.... .....++|+|.+| |-.++-. +......+...... ..++... +...|+.+.......
T Consensus 161 vGGD~yd~~~~~---~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~~~----l~~~n~~~~~~~~~~-- 230 (367)
T COG2208 161 VGGDYYDFIQLG---EKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPADV----LETLNRVLKQNLEED-- 230 (367)
T ss_pred cCCceEEEEEEC---CcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHHHH----HHHHHHHHHhcccCC--
Confidence 455666553322 1345889999999 5555433 33322222221111 1223333 333344444332221
Q ss_pred CCCceEEEEEEE--CCEEEEEEecccceEEEeCCee---EeeCCCCCCCChhHHHHHHHhCCeEEeccceeecCcccccc
Q 020272 123 DAGSTASTAILV--GDRLLVANVGDSRAVICRGGNA---IAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSR 197 (328)
Q Consensus 123 ~~gtT~~~~~i~--~~~l~~a~vGDSr~yl~r~g~~---~~lt~dh~~~~~~e~~ri~~~~g~~~~~~~~~~~~~~~~tr 197 (328)
+-+|+...+++ ...+..+++|---.++++.++. ..++ ....
T Consensus 231 -~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~---------------------------------~~g~ 276 (367)
T COG2208 231 -MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT---------------------------------ALGL 276 (367)
T ss_pred -cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc---------------------------------CCCc
Confidence 56788888876 6799999999999998886542 2222 1222
Q ss_pred ccCCccceeeeecCCce----eEEEecCCCcEEEEEcCCccc-------CCCHHHHHHhhcc--CCCHHHHHHHHHhhhh
Q 020272 198 AFGDRLLKQYVVADPEI----QEEVIDSSLEFLILASDGLWD-------VVTNEEAVAMIKP--IQDPEEAAQTTSPVSL 264 (328)
Q Consensus 198 alG~~~~~~~~~~~p~v----~~~~~~~~~d~llL~SDGl~d-------~l~~~ei~~ii~~--~~~~~~~a~~L~~~A~ 264 (328)
.+| ..|++ ....+.+ ||.+++.|||+.+ .+..+...+++.. ..+++++++.+.+...
T Consensus 277 piG---------~~~~~~~~~~~~~l~~-gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~ 346 (367)
T COG2208 277 PIG---------LLPDYQYEVASLQLEP-GDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEEILEAILESLE 346 (367)
T ss_pred eee---------ecCCccchheeEEecC-CCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 333 33333 3333334 8999999999998 5667777777773 3688999998888876
Q ss_pred cCCCCcceeecccccccCCCeEEEEEecc
Q 020272 265 FGSWPIKVVHPFLALHEHPFIATALLLFS 293 (328)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~DniTvivi~~~ 293 (328)
.-... ...+||+|++++.+.
T Consensus 347 ~~~~~---------~~~~DDiTll~lk~~ 366 (367)
T COG2208 347 ELQGD---------QIQDDDITLLVLKVK 366 (367)
T ss_pred HhhCC---------ccccCceEEEEEEec
Confidence 42221 345577999998764
No 20
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=53.30 E-value=8.6 Score=26.90 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=15.0
Q ss_pred cCCCcEEEEEcCCcccCCC
Q 020272 220 DSSLEFLILASDGLWDVVT 238 (328)
Q Consensus 220 ~~~~d~llL~SDGl~d~l~ 238 (328)
...|+.+|+++||+|=.+.
T Consensus 24 ~~~G~Rllva~nGv~lEv~ 42 (72)
T PF09436_consen 24 ERPGHRLLVASNGVFLEVR 42 (72)
T ss_pred ccCCcEEEEecCcEEEEEe
Confidence 4568999999999995433
No 21
>COG3315 O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=39.95 E-value=66 Score=29.30 Aligned_cols=89 Identities=13% Similarity=0.074 Sum_probs=50.8
Q ss_pred ccceEEEeCCe-eEeeCCCCCCCChhHHHHHHHhCCeEEeccceeecCccccccccC-CccceeeeecCCceeEEEecCC
Q 020272 145 DSRAVICRGGN-AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFG-DRLLKQYVVADPEIQEEVIDSS 222 (328)
Q Consensus 145 DSr~yl~r~g~-~~~lt~dh~~~~~~e~~ri~~~~g~~~~~~~~~~~~~~~~tralG-~~~~~~~~~~~p~v~~~~~~~~ 222 (328)
|+|+|.+..+. +...-.||+...+...+.+.+.++.... .. ..+.-.+= +...+ .+...-+...
T Consensus 104 DTRayRl~~~~~~~vfEvD~Pevi~~K~~~l~e~~~~~~~--~~-----~~Va~Dl~~~dw~~-------~L~~~G~d~~ 169 (297)
T COG3315 104 DTRAYRLDWPKGTRVFEVDLPEVIEFKKKLLAERGATPPA--HR-----RLVAVDLREDDWPQ-------ALAAAGFDRS 169 (297)
T ss_pred ccceeecCCCCCCeEEECCCcHHHHHHHHHhhhcCCCCCc--eE-----EEEeccccccchHH-------HHHhcCCCcC
Confidence 99999999885 9999999998777766766666543210 00 00000000 00000 0000011111
Q ss_pred CcEEEEEcCCcccCCCHHHHHHhhcc
Q 020272 223 LEFLILASDGLWDVVTNEEAVAMIKP 248 (328)
Q Consensus 223 ~d~llL~SDGl~d~l~~~ei~~ii~~ 248 (328)
.-.++-.-||.-||+++++.+++..
T Consensus 170 -~pt~~iaEGLl~YL~~~~v~~ll~~ 194 (297)
T COG3315 170 -RPTLWIAEGLLMYLPEEAVDRLLSR 194 (297)
T ss_pred -CCeEEEeccccccCCHHHHHHHHHH
Confidence 2344667899999999999887754
No 22
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=39.45 E-value=46 Score=27.88 Aligned_cols=46 Identities=17% Similarity=0.216 Sum_probs=35.0
Q ss_pred CcEEEEEcCCcc-----------cCCCHHHHHHhhccC----CCHHHHHHHHHhhhhcCCC
Q 020272 223 LEFLILASDGLW-----------DVVTNEEAVAMIKPI----QDPEEAAQTTSPVSLFGSW 268 (328)
Q Consensus 223 ~d~llL~SDGl~-----------d~l~~~ei~~ii~~~----~~~~~~a~~L~~~A~~~~~ 268 (328)
+|.+|..|.||| |+|.++..=+.+.+. .-|.+.|..|++.-...|+
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD 131 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGD 131 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCC
Confidence 578899999998 667766665655543 6789999999999776554
No 23
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=35.61 E-value=40 Score=22.56 Aligned_cols=26 Identities=38% Similarity=0.426 Sum_probs=22.7
Q ss_pred CCHHHHHHhhccC-CCHHHHHHHHHhh
Q 020272 237 VTNEEAVAMIKPI-QDPEEAAQTTSPV 262 (328)
Q Consensus 237 l~~~ei~~ii~~~-~~~~~~a~~L~~~ 262 (328)
-+++||-.++..+ -||.+++++|+.+
T Consensus 19 hse~eIya~L~ecnMDpnea~qrLL~q 45 (60)
T PF06972_consen 19 HSEEEIYAMLKECNMDPNEAVQRLLSQ 45 (60)
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHHhc
Confidence 5789999988877 7999999999875
No 24
>PRK10693 response regulator of RpoS; Provisional
Probab=29.72 E-value=4.2e+02 Score=23.87 Aligned_cols=50 Identities=4% Similarity=-0.035 Sum_probs=32.8
Q ss_pred HHHHHhhcHHHHhhhccCCCCCCceEEEEEEE--CCEEEEEEecccceEEEeCCee
Q 020272 103 ADAYSHTDSEFLKSENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNA 156 (328)
Q Consensus 103 ~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDSr~yl~r~g~~ 156 (328)
.+.+..+|+.+....... ..|+..++++ .+++.+++.|-...++..++.+
T Consensus 208 ~~~l~~lN~~l~~~~~~~----~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 208 GALLKQVNHLLRQANLPG----QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred HHHHHHHHHHHHhcCCCc----eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 445556666666552221 2577777776 4689999999999885444444
No 25
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=29.33 E-value=41 Score=24.94 Aligned_cols=29 Identities=14% Similarity=0.343 Sum_probs=23.3
Q ss_pred CCCcEEEEEcCCcccCCCHHHHHHhhccC
Q 020272 221 SSLEFLILASDGLWDVVTNEEAVAMIKPI 249 (328)
Q Consensus 221 ~~~d~llL~SDGl~d~l~~~ei~~ii~~~ 249 (328)
.++|-++|+.|||+-.+...+..+-++..
T Consensus 23 ~~~D~vlL~qdGV~aAl~~~~~~~sl~~~ 51 (96)
T COG2168 23 TEGDAVLLLQDGVYAALKGNRYLASLRES 51 (96)
T ss_pred cccCeEEEEcccchhhhcCcHHHHHHhcC
Confidence 45789999999999988887777766553
No 26
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=21.74 E-value=1.5e+02 Score=16.07 Aligned_cols=20 Identities=20% Similarity=0.378 Sum_probs=15.8
Q ss_pred EEECCEEEEEEecccceEEE
Q 020272 132 ILVGDRLLVANVGDSRAVIC 151 (328)
Q Consensus 132 ~i~~~~l~~a~vGDSr~yl~ 151 (328)
+-.++.+|++-.|..|+..+
T Consensus 9 v~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EETTSEEEEEECCCTEEEEE
T ss_pred EeCCCCEEEEECCCCEEEEC
Confidence 33788999999999888754
Done!