Query 020274
Match_columns 328
No_of_seqs 398 out of 2963
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 14:25:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.7E-36 5.7E-41 254.8 21.4 153 170-326 7-159 (169)
2 4gpm_A Engineered protein OR26 100.0 7E-36 2.4E-40 251.0 20.8 163 130-294 2-164 (169)
3 1oy3_D Transcription factor in 100.0 1.4E-35 4.8E-40 266.1 22.8 191 133-327 10-249 (282)
4 1yyh_A HN1;, notch 1, ankyrin 100.0 2.8E-35 9.5E-40 261.9 23.8 189 133-327 58-247 (253)
5 3hra_A Ankyrin repeat family p 100.0 6.7E-35 2.3E-39 249.5 24.4 187 133-325 6-200 (201)
6 4b93_B Ankyrin repeat domain-c 100.0 4.3E-36 1.5E-40 270.6 16.5 184 135-326 55-239 (269)
7 2f8y_A Notch homolog 1, transl 100.0 1.6E-34 5.4E-39 251.2 25.6 190 132-327 25-215 (223)
8 2rfa_A Transient receptor pote 100.0 1.2E-34 4.1E-39 253.6 23.1 186 134-325 5-219 (232)
9 3aji_A 26S proteasome non-ATPa 100.0 2.4E-34 8.1E-39 251.4 24.6 188 132-325 40-227 (231)
10 3aji_A 26S proteasome non-ATPa 100.0 1.3E-34 4.4E-39 253.1 22.7 188 134-326 8-195 (231)
11 2xai_A ASB-9, ankyrin repeat a 100.0 7.6E-34 2.6E-38 253.9 24.6 185 134-326 5-189 (261)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 2.3E-34 8E-39 256.0 20.8 181 141-326 32-213 (253)
13 3b7b_A Euchromatic histone-lys 100.0 1.4E-33 4.9E-38 247.4 25.5 176 134-311 46-222 (237)
14 4b93_B Ankyrin repeat domain-c 100.0 1.5E-34 5E-39 260.6 19.7 189 134-326 13-208 (269)
15 2dzn_A Probable 26S proteasome 100.0 1.2E-33 4.2E-38 246.1 23.6 184 135-323 5-194 (228)
16 1k1a_A B-cell lymphoma 3-encod 100.0 2.6E-33 9E-38 245.8 25.4 187 134-326 11-206 (241)
17 1ikn_D Protein (I-kappa-B-alph 100.0 3.8E-35 1.3E-39 257.9 12.9 190 134-327 10-208 (236)
18 3b7b_A Euchromatic histone-lys 100.0 9E-34 3.1E-38 248.6 21.5 189 133-327 12-201 (237)
19 2rfm_A Putative ankyrin repeat 100.0 5.2E-34 1.8E-38 243.0 19.1 160 162-325 30-189 (192)
20 2etb_A Transient receptor pote 100.0 2.7E-34 9.4E-39 255.5 17.0 188 134-325 4-243 (256)
21 3ljn_A Hypothetical protein; a 100.0 9.9E-34 3.4E-38 264.6 21.1 186 134-325 22-266 (364)
22 1k1a_A B-cell lymphoma 3-encod 100.0 4.9E-34 1.7E-38 250.5 17.8 189 133-327 47-240 (241)
23 1s70_B 130 kDa myosin-binding 100.0 1.7E-33 5.7E-38 255.4 21.8 187 132-324 40-286 (299)
24 3d9h_A CDNA FLJ77766, highly s 100.0 4.7E-33 1.6E-37 252.3 24.6 185 134-326 61-245 (285)
25 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-33 6.6E-38 234.9 20.3 158 164-325 11-168 (169)
26 3v31_A Ankyrin repeat family A 100.0 1.9E-33 6.4E-38 234.1 19.6 155 166-324 2-156 (167)
27 2dzn_A Probable 26S proteasome 100.0 2.3E-33 7.8E-38 244.4 20.6 185 133-324 37-226 (228)
28 2f8y_A Notch homolog 1, transl 100.0 2.6E-33 8.9E-38 243.5 19.4 176 146-326 5-181 (223)
29 3jxi_A Vanilloid receptor-rela 100.0 4.4E-34 1.5E-38 254.5 14.8 188 134-325 7-247 (260)
30 3utm_A Tankyrase-1; tankyrase, 100.0 1.4E-32 4.8E-37 253.7 25.4 188 134-327 60-304 (351)
31 1awc_B Protein (GA binding pro 100.0 6.2E-33 2.1E-37 227.9 19.5 151 168-323 3-153 (153)
32 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-32 3.7E-37 263.6 24.1 188 133-326 213-400 (437)
33 1wdy_A 2-5A-dependent ribonucl 100.0 5.2E-32 1.8E-36 242.4 26.8 186 133-324 40-240 (285)
34 2pnn_A Transient receptor pote 100.0 4.5E-34 1.5E-38 256.6 13.1 191 132-326 13-256 (273)
35 4hbd_A KN motif and ankyrin re 100.0 8.3E-34 2.8E-38 256.3 14.9 185 137-325 81-272 (276)
36 1ihb_A P18-INK4C(INK6), cyclin 100.0 6E-33 2.1E-37 229.5 17.8 157 166-327 4-161 (162)
37 4g8k_A 2-5A-dependent ribonucl 100.0 3.2E-32 1.1E-36 251.8 24.4 189 133-326 26-296 (337)
38 1wdy_A 2-5A-dependent ribonucl 100.0 7.2E-32 2.5E-36 241.5 25.6 189 133-327 73-277 (285)
39 3kea_A K1L; tropism, ANK repea 100.0 1.7E-33 5.9E-38 255.3 14.8 185 133-326 32-218 (285)
40 3utm_A Tankyrase-1; tankyrase, 100.0 5.8E-32 2E-36 249.5 25.3 189 133-326 25-270 (351)
41 3v30_A DNA-binding protein rfx 100.0 1.3E-32 4.5E-37 230.0 18.9 154 167-324 2-156 (172)
42 2fo1_E LIN-12 protein; beta-ba 100.0 1.4E-32 4.8E-37 258.5 21.2 192 131-328 165-371 (373)
43 3d9h_A CDNA FLJ77766, highly s 100.0 3.1E-32 1E-36 246.9 22.6 189 133-326 16-213 (285)
44 2xai_A ASB-9, ankyrin repeat a 100.0 2E-32 6.7E-37 244.7 21.0 183 133-325 37-219 (261)
45 3eu9_A Huntingtin-interacting 100.0 5.3E-32 1.8E-36 236.6 22.9 190 133-327 43-234 (240)
46 1oy3_D Transcription factor in 100.0 1.3E-32 4.5E-37 246.7 19.2 177 133-311 46-270 (282)
47 1n11_A Ankyrin; clathrin, BAND 100.0 7.8E-32 2.7E-36 257.6 24.9 189 133-327 180-368 (437)
48 2rfa_A Transient receptor pote 100.0 1.1E-31 3.6E-36 234.9 20.4 161 166-326 2-181 (232)
49 3f6q_A Integrin-linked protein 100.0 3.6E-32 1.2E-36 229.2 16.4 157 166-326 4-161 (179)
50 3twr_A Tankyrase-2; ankyrin re 100.0 2.7E-32 9.1E-37 226.6 15.3 158 164-326 5-163 (165)
51 1s70_B 130 kDa myosin-binding 100.0 1.3E-31 4.6E-36 242.8 21.0 184 139-326 5-255 (299)
52 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.1E-31 3.9E-36 220.6 18.3 153 167-325 2-155 (156)
53 3eu9_A Huntingtin-interacting 100.0 4.6E-31 1.6E-35 230.7 22.9 187 134-326 11-200 (240)
54 3v30_A DNA-binding protein rfx 100.0 8.7E-32 3E-36 225.0 16.9 167 135-302 5-171 (172)
55 3kea_A K1L; tropism, ANK repea 100.0 1.2E-31 4E-36 243.2 17.4 175 140-324 7-182 (285)
56 2fo1_E LIN-12 protein; beta-ba 100.0 9.9E-32 3.4E-36 252.8 17.1 191 131-327 124-337 (373)
57 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.5E-31 1.5E-35 218.2 18.2 158 131-291 4-162 (162)
58 1sw6_A Regulatory protein SWI6 100.0 2.6E-32 9E-37 252.3 10.0 172 138-310 103-327 (327)
59 4g8k_A 2-5A-dependent ribonucl 100.0 5E-30 1.7E-34 237.0 24.2 186 133-327 126-325 (337)
60 1ikn_D Protein (I-kappa-B-alph 100.0 1.4E-31 4.9E-36 235.0 11.8 160 163-326 4-174 (236)
61 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.2E-30 2.1E-34 213.6 21.1 156 132-289 14-169 (169)
62 3f6q_A Integrin-linked protein 100.0 3E-30 1E-34 217.3 18.1 166 133-299 6-171 (179)
63 3ljn_A Hypothetical protein; a 100.0 9.4E-31 3.2E-35 244.4 15.7 163 160-326 13-234 (364)
64 1awc_B Protein (GA binding pro 100.0 1.1E-29 3.6E-34 208.5 20.0 150 133-285 3-152 (153)
65 3hra_A Ankyrin repeat family p 100.0 1.2E-29 4.1E-34 216.7 20.3 163 164-326 2-168 (201)
66 1bi7_B P16INK4A, MTS1, multipl 100.0 5.6E-31 1.9E-35 217.2 11.5 145 161-306 6-151 (156)
67 3v31_A Ankyrin repeat family A 100.0 9.6E-30 3.3E-34 211.5 18.3 158 134-293 5-162 (167)
68 2etb_A Transient receptor pote 100.0 1.9E-30 6.3E-35 230.7 14.4 154 167-324 2-202 (256)
69 3twr_A Tankyrase-2; ankyrin re 100.0 8E-30 2.7E-34 211.6 16.5 157 132-290 8-164 (165)
70 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.2E-30 4.1E-35 230.4 11.1 155 165-324 3-160 (239)
71 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.6E-29 1.6E-33 204.9 19.0 153 133-288 3-155 (156)
72 1d9s_A Cyclin-dependent kinase 100.0 6.2E-30 2.1E-34 206.1 13.4 133 158-291 3-136 (136)
73 2rfm_A Putative ankyrin repeat 100.0 3.1E-29 1.1E-33 213.4 18.1 155 133-289 36-190 (192)
74 3t8k_A Uncharacterized protein 100.0 2E-30 6.8E-35 221.0 8.8 152 167-324 6-175 (186)
75 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.1E-30 3.9E-35 230.6 7.1 175 134-311 7-193 (239)
76 2pnn_A Transient receptor pote 100.0 2.9E-29 9.8E-34 225.2 15.7 172 133-304 55-272 (273)
77 2vge_A RELA-associated inhibit 100.0 1.2E-30 4.1E-35 229.4 5.3 164 148-311 1-200 (229)
78 1d9s_A Cyclin-dependent kinase 100.0 4.2E-29 1.4E-33 201.2 12.8 132 190-326 2-134 (136)
79 2vge_A RELA-associated inhibit 100.0 5.8E-32 2E-36 237.9 -6.7 152 133-286 22-208 (229)
80 1n0r_A 4ANK, 4 ankyrin repeats 100.0 5.3E-28 1.8E-32 190.5 16.6 126 166-291 1-126 (126)
81 3jxi_A Vanilloid receptor-rela 100.0 1.2E-28 4.3E-33 219.2 12.2 162 133-294 47-253 (260)
82 2jab_A H10-2-G3; HER2, darpin, 100.0 7.4E-28 2.5E-32 193.8 15.4 126 164-289 11-136 (136)
83 1sw6_A Regulatory protein SWI6 100.0 7.9E-29 2.7E-33 228.9 10.8 181 143-327 58-307 (327)
84 3t8k_A Uncharacterized protein 100.0 4.8E-29 1.6E-33 212.4 8.0 159 134-296 8-184 (186)
85 3c5r_A BARD-1, BRCA1-associate 100.0 2E-28 6.8E-33 197.2 9.4 130 190-324 1-130 (137)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 3.5E-27 1.2E-31 189.9 15.0 125 197-325 11-135 (136)
87 4hbd_A KN motif and ankyrin re 99.9 6.9E-27 2.4E-31 210.9 17.0 155 133-289 112-273 (276)
88 2b0o_E UPLC1; arfgap, structur 99.9 6.6E-27 2.3E-31 213.9 15.4 139 167-311 151-298 (301)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.4E-26 8.1E-31 181.0 16.4 125 199-327 1-125 (126)
90 3c5r_A BARD-1, BRCA1-associate 99.9 2.4E-27 8.1E-32 190.9 8.9 129 163-291 6-134 (137)
91 1bi7_B P16INK4A, MTS1, multipl 99.9 8E-27 2.7E-31 192.2 12.1 129 194-327 6-135 (156)
92 3deo_A Signal recognition part 99.9 9.3E-27 3.2E-31 197.0 12.2 140 164-325 41-181 (183)
93 3ui2_A Signal recognition part 99.9 1.5E-26 5.2E-31 204.9 12.5 138 165-324 43-181 (244)
94 3ehr_A Osteoclast-stimulating 99.9 6E-27 2E-31 203.9 9.2 137 164-300 70-207 (222)
95 3aaa_C Myotrophin, protein V-1 99.9 8.5E-26 2.9E-30 178.4 14.3 110 197-306 4-113 (123)
96 3aaa_C Myotrophin, protein V-1 99.9 8.2E-26 2.8E-30 178.5 10.5 112 164-275 4-115 (123)
97 3lvq_E ARF-GAP with SH3 domain 99.9 1E-24 3.5E-29 212.6 17.3 136 167-308 132-276 (497)
98 3ehr_A Osteoclast-stimulating 99.9 1E-25 3.4E-30 196.1 8.2 126 196-325 69-195 (222)
99 2aja_A Ankyrin repeat family p 99.9 1.4E-26 4.7E-31 217.9 -1.2 162 142-324 76-246 (376)
100 2aja_A Ankyrin repeat family p 99.9 1E-26 3.5E-31 218.9 -2.2 181 134-326 94-342 (376)
101 3jue_A Arfgap with coiled-coil 99.9 3.6E-24 1.2E-28 200.8 14.5 147 165-311 197-349 (368)
102 3deo_A Signal recognition part 99.9 1.6E-24 5.6E-29 183.1 10.5 116 197-313 41-157 (183)
103 1dcq_A PYK2-associated protein 99.9 2.4E-23 8.1E-28 188.2 16.1 127 166-292 129-264 (278)
104 2b0o_E UPLC1; arfgap, structur 99.9 4.9E-24 1.7E-28 194.8 11.6 141 133-279 152-299 (301)
105 1dcq_A PYK2-associated protein 99.9 8E-23 2.7E-27 184.7 18.2 122 201-326 131-261 (278)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3E-23 1E-27 155.7 12.7 92 200-291 2-93 (93)
107 3ui2_A Signal recognition part 99.9 1E-23 3.5E-28 186.6 11.0 114 198-312 43-157 (244)
108 3jue_A Arfgap with coiled-coil 99.9 7.1E-23 2.4E-27 192.0 14.6 125 197-325 196-323 (368)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.2E-22 4.2E-27 152.4 13.0 93 166-258 1-93 (93)
110 2l6b_A NR1C; ankyrin, consensu 99.9 1.2E-23 4.1E-28 163.9 7.2 107 196-302 5-111 (115)
111 2l6b_A NR1C; ankyrin, consensu 99.9 9.9E-23 3.4E-27 158.7 9.2 108 163-270 5-112 (115)
112 3lvq_E ARF-GAP with SH3 domain 99.9 4.4E-22 1.5E-26 194.0 15.8 135 134-274 134-275 (497)
113 2zgd_A 3 repeat synthetic anky 99.8 4.6E-20 1.6E-24 142.8 10.6 92 228-323 19-110 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1.6E-19 5.3E-24 139.8 10.4 89 164-252 21-109 (110)
115 4g26_A Pentatricopeptide repea 48.7 14 0.00047 35.1 4.1 100 181-286 91-198 (501)
116 4g26_A Pentatricopeptide repea 37.4 50 0.0017 31.2 6.0 93 214-312 91-191 (501)
117 3zrh_A Ubiquitin thioesterase 26.1 1.6E+02 0.0054 27.2 6.8 51 138-188 28-90 (454)
118 2ayu_A Nucleosome assembly pro 24.4 16 0.00054 33.9 0.0 8 13-20 228-235 (417)
119 3zrh_A Ubiquitin thioesterase 24.2 1.9E+02 0.0066 26.6 7.0 49 173-221 28-90 (454)
120 3mkq_B Coatomer subunit alpha; 23.1 2.4E+02 0.0083 22.5 6.9 135 131-291 7-144 (177)
121 2zd7_A VPS75, vacuolar protein 22.6 19 0.00064 31.2 0.1 30 74-103 225-254 (264)
122 2d46_A Calcium channel, voltag 22.1 29 0.001 22.4 0.9 12 4-15 3-14 (61)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.7e-36 Score=254.80 Aligned_cols=153 Identities=36% Similarity=0.539 Sum_probs=95.5
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHH
Q 020274 170 PLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSV 249 (328)
Q Consensus 170 ~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv 249 (328)
+|+.||..|+.++|++||++|+++|.+|..|+||||+|+..++.+++++|+++|++++.++..|+||||+|+..|+.+++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v 86 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV 86 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH
Confidence 45666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 250 KLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 250 ~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+|+ .+++++|....
T Consensus 87 ~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~----~~iv~~Ll~~G 159 (169)
T 4gpm_A 87 KLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGN----EEVVKLLEKQG 159 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHTC-
T ss_pred HHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC----HHHHHHHHHCC
Confidence 66666666666666666666666666666666666666666666666666666666666665 56666665543
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=7e-36 Score=250.98 Aligned_cols=163 Identities=31% Similarity=0.465 Sum_probs=151.9
Q ss_pred ccccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHH
Q 020274 130 SKYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAII 209 (328)
Q Consensus 130 ~~~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~ 209 (328)
+...++|+.|++.|+.+.++.||+.|++++.. +..|+||||+|+..++.+++++|++.|++++.++..|+||||+|+.
T Consensus 2 sdlg~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~--d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 2 SELGKRLIEAAENGNKDRVKDLIENGADVNAS--DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAE 79 (169)
T ss_dssp CHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHH
Confidence 34567899999999999999999999988764 7899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 020274 210 GKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING 289 (328)
Q Consensus 210 ~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 289 (328)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 80 ~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 80 NGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQG 159 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred cCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 020274 290 ADKSR 294 (328)
Q Consensus 290 ad~~~ 294 (328)
|++..
T Consensus 160 A~ie~ 164 (169)
T 4gpm_A 160 GWLEH 164 (169)
T ss_dssp -----
T ss_pred CCcCC
Confidence 99864
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.4e-35 Score=266.15 Aligned_cols=191 Identities=26% Similarity=0.309 Sum_probs=178.9
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCC-CCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPN-LGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g 211 (328)
...|+.|+..+..+.++.|++.+.+++ ++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~ 89 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVR 89 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTT
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 357899999999999999999998854 5556889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCC-----------------------------------------------CCCCCCCCChHHHHHHHcC
Q 020274 212 KEAVISHLLRKGAN-----------------------------------------------PHVKDGDGATPLHYAVQVG 244 (328)
Q Consensus 212 ~~~~v~~Ll~~g~d-----------------------------------------------~~~~d~~g~tpLh~A~~~g 244 (328)
+.+++++|+++|++ ++.++..|.||||+|+..|
T Consensus 90 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g 169 (282)
T 1oy3_D 90 AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHK 169 (282)
T ss_dssp CHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTT
T ss_pred CcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcC
Confidence 99999999998865 6778889999999999999
Q ss_pred CHHHHHHHHhCCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHh
Q 020274 245 AMQSVKLLIKYNVDVNVADNE-GWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 323 (328)
Q Consensus 245 ~~~iv~~Ll~~ga~in~~d~~-g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~ 323 (328)
+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+ .+++++|.
T Consensus 170 ~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~----~~~v~~Ll 245 (282)
T 1oy3_D 170 DAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN----PILARLLR 245 (282)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSC----HHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCC----cHHHHHHH
Confidence 999999999999999999865 9999999999999999999999999999999999999999999999 99999998
Q ss_pred hCCC
Q 020274 324 ILPV 327 (328)
Q Consensus 324 ~~~~ 327 (328)
....
T Consensus 246 ~~ga 249 (282)
T 1oy3_D 246 AHGA 249 (282)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 7654
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.8e-35 Score=261.94 Aligned_cols=189 Identities=22% Similarity=0.268 Sum_probs=179.6
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCC-CCCccCCCCCcHHHHHHHcC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGL-DIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-di~~~d~~g~t~L~~A~~~g 211 (328)
...++.|+..+..+.++.|++.|.+++.. +..|+||||+|+..|+.+++++|+++|+ +++.++..|.||||+|+..|
T Consensus 58 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 135 (253)
T 1yyh_A 58 ETALHLAARYSRSDAAKRLLEASADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Confidence 45789999999999999999999887764 7889999999999999999999999987 89999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 020274 212 KEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 291 (328)
Q Consensus 212 ~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 291 (328)
+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 136 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 215 (253)
T 1yyh_A 136 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 215 (253)
T ss_dssp CSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 292 KSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 292 ~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
++.+|..|+|||++|+.+|+ .+|+++|+..+.
T Consensus 216 ~~~~d~~g~tpl~~A~~~g~----~~i~~~l~~~~~ 247 (253)
T 1yyh_A 216 RDITDHMDRLPRDIAQERMH----HDIVRLLDLEHH 247 (253)
T ss_dssp TTCCCTTCCCHHHHHHHTTC----HHHHHHHHC---
T ss_pred ccccccCCCCHHHHHHHcCC----HHHHHHHHHHhh
Confidence 99999999999999999999 999999987654
No 5
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.7e-35 Score=249.52 Aligned_cols=187 Identities=26% Similarity=0.350 Sum_probs=176.9
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCC-CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNA-TPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g 211 (328)
...++.|+..+..+.++.++..+. +++ ..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVD--EVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTT--CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 357899999999999999999876 444 45788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHH-HCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCC-CCccccCCCCCcHHHHHHHcCC-----HHHHHH
Q 020274 212 KEAVISHLL-RKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYN-VDVNVADNEGWTPLHIAIQSRN-----RDIAKV 284 (328)
Q Consensus 212 ~~~~v~~Ll-~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~g-a~in~~d~~g~TpL~~A~~~g~-----~~iv~~ 284 (328)
+.+++++|+ ..+++++.++..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..++ .+++++
T Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~ 163 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKL 163 (201)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHH
T ss_pred CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHH
Confidence 999999999 677899999999999999999999999999999999 9999999999999999999998 999999
Q ss_pred HHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 285 LLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 285 Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
|+++|++++.+|..|.||||+|+.+|+ .+++++|...
T Consensus 164 Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~~~~~Ll~~ 200 (201)
T 3hra_A 164 LMENGADQSIKDNSGRTAMDYANQKGY----TEISKILAQY 200 (201)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHHTC
T ss_pred HHHCCCCCCccCCCCCCHHHHHHHcCC----HhHHHHHHhc
Confidence 999999999999999999999999999 9999999865
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=270.63 Aligned_cols=184 Identities=26% Similarity=0.339 Sum_probs=155.9
Q ss_pred HHHHHHHhhCh-HHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH
Q 020274 135 DLLKEVEQLLE-PEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKE 213 (328)
Q Consensus 135 ~l~~ai~~~~~-~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~ 213 (328)
.++.++..+.. ..++.+++.|++++.. +..|+||||+|+..|+.++|++|++.|++++.++..|.||+|+|+..++.
T Consensus 55 ~L~~a~~~~~~~~~v~~Ll~~Gadvn~~--d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~ 132 (269)
T 4b93_B 55 PLCQCPKCAPAQKRLAKVPASGLGVNVT--SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHF 132 (269)
T ss_dssp --------------------CCCCTTCC--CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHHHHhCCHHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChH
Confidence 34455554443 4567888999888764 78899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 020274 214 AVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKS 293 (328)
Q Consensus 214 ~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 293 (328)
+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|+++|.++..|.||||+|+..|+.++|++|+++|+|++
T Consensus 133 ~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 133 QVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp HHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 294 RKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 294 ~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
.+|..|+||||+|+.++ +|+++|+.++
T Consensus 213 ~~d~~G~TpL~~A~~~~------~i~~lL~~l~ 239 (269)
T 4b93_B 213 VLNKRQRTAVDCAEQNS------KIMELLQVVP 239 (269)
T ss_dssp CCCTTSCCSGGGSCTTC------HHHHHTTC--
T ss_pred CcCCCCCCHHHHHHhCC------cHHHHHHHHH
Confidence 99999999999998766 4667766554
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.6e-34 Score=251.16 Aligned_cols=190 Identities=22% Similarity=0.262 Sum_probs=181.1
Q ss_pred ccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCC-CCCccCCCCCcHHHHHHHc
Q 020274 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGL-DIDSVDKDGLTALHKAIIG 210 (328)
Q Consensus 132 ~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-di~~~d~~g~t~L~~A~~~ 210 (328)
....++.|+..+..+.++.+++.|.+++.. +..|+||||+|+..|+.+++++|++.++ +++.++..|.||||+|+..
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 102 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 102 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHh
Confidence 345789999999999999999999887654 7889999999999999999999999987 8999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 020274 211 KKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGA 290 (328)
Q Consensus 211 g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 290 (328)
++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 103 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 182 (223)
T 2f8y_A 103 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 182 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 291 DKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 291 d~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
+++.++..|.|||++|+.+|+ .+++++|.....
T Consensus 183 ~~~~~~~~g~t~l~~A~~~~~----~~i~~~L~~~g~ 215 (223)
T 2f8y_A 183 NRDITDHMDRLPRDIAQERMH----HDIVRLLDEYNL 215 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred CCccccccCCCHHHHHHHhcc----hHHHHHHHHcCC
Confidence 999999999999999999999 999999987653
No 8
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.2e-34 Score=253.63 Aligned_cols=186 Identities=24% Similarity=0.288 Sum_probs=174.0
Q ss_pred HHHHHHHHhhChHHHHHHHhc-CCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCC-----CccCCCCCcHHHHH
Q 020274 134 EDLLKEVEQLLEPEEREILNQ-NATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDI-----DSVDKDGLTALHKA 207 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~-g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi-----~~~d~~g~t~L~~A 207 (328)
..++.|+..+..+.++.+++. |.+++.. +..|+||||+|+..|+.+++++|++.|+++ +.++..|.||||+|
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 5 SPLLLAAKENDVQALSKLLKFEGCEVHQR--GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 468999999999999999998 7776654 789999999999999999999999999987 67788999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCC-------------CCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHH
Q 020274 208 IIGKKEAVISHLLRKGANPHVKDG-------------DGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAI 274 (328)
Q Consensus 208 ~~~g~~~~v~~Ll~~g~d~~~~d~-------------~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~ 274 (328)
+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 162 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI 162 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999998765 7999999999999999999999999999999999999999999
Q ss_pred HcCCHHHH----HHHHHcCCCC------CCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 275 QSRNRDIA----KVLLINGADK------SRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 275 ~~g~~~iv----~~Ll~~gad~------~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|+ .+++++|...
T Consensus 163 ~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~----~~~v~~Ll~~ 219 (232)
T 2rfa_A 163 LQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN----IVMFQHLMQK 219 (232)
T ss_dssp TCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC----HHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC----HHHHHHHHhc
Confidence 99999988 9999999998 5899999999999999999 9999988754
No 9
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.4e-34 Score=251.40 Aligned_cols=188 Identities=28% Similarity=0.329 Sum_probs=143.8
Q ss_pred ccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 020274 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 132 ~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g 211 (328)
....++.|+..+..+.++.+++.|.+++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVPVND--KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKN 117 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSCC--CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCCCCC--cCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 34567777777777777777777766554 3566777777777777777777777777777777777777777777777
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 020274 212 KEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 291 (328)
Q Consensus 212 ~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 291 (328)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 118 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 197 (231)
T 3aji_A 118 RHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS 197 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 292 KSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 292 ~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
++.+|..|.|||++|+..++ .+++++|...
T Consensus 198 ~~~~~~~g~t~l~~A~~~~~----~~i~~lL~~~ 227 (231)
T 3aji_A 198 IYIENKEEKTPLQVAKGGLG----LILKRLAEGE 227 (231)
T ss_dssp SCCCCTTSCCHHHHSCHHHH----HHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHhhHH----HHHHHHHccc
Confidence 77777777777777777666 7777777653
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-34 Score=253.08 Aligned_cols=188 Identities=21% Similarity=0.256 Sum_probs=178.9
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKE 213 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~ 213 (328)
..++.|+..|+.+.++.++..+... ....+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 86 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXD 86 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCH
T ss_pred chHHHHHHhCCHHHHHHHHHhchhh-hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHH
Confidence 4589999999999999999987543 345578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 020274 214 AVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKS 293 (328)
Q Consensus 214 ~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 293 (328)
+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 166 (231)
T 3aji_A 87 EIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 294 RKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 294 ~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
.++..|.||||+|+..|+ .+++++|....
T Consensus 167 ~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g 195 (231)
T 3aji_A 167 IQDTEGNTPLHLACDEER----VEEAKFLVTQG 195 (231)
T ss_dssp CCCTTSCCHHHHHHHTTC----HHHHHHHHHTT
T ss_pred ccCCCCCCHHHHHHHCCC----HHHHHHHHHCC
Confidence 999999999999999999 99999998764
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.6e-34 Score=253.93 Aligned_cols=185 Identities=25% Similarity=0.314 Sum_probs=161.4
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKE 213 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~ 213 (328)
..++.|+..|..+.++.+++.|.+++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWAVNI--ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 82 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSC--CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 457888899999999999998877654 477889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 020274 214 AVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKS 293 (328)
Q Consensus 214 ~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 293 (328)
+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 83 ~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 83 DCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 999999999988875 4468899999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 294 RKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 294 ~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
. +..|.||||+|+..|+ .+++++|...+
T Consensus 162 ~-~~~g~t~Lh~A~~~~~----~~~v~~Ll~~g 189 (261)
T 2xai_A 162 Q-GKGQDSPLHAVARTAS----EELACLLMDFG 189 (261)
T ss_dssp C-CBTTBCHHHHHHHHTC----HHHHHHHHHTT
T ss_pred C-CCCCCChHHHHHHcCC----HHHHHHHHHcC
Confidence 5 7888999999999888 88888887654
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.3e-34 Score=255.96 Aligned_cols=181 Identities=28% Similarity=0.293 Sum_probs=155.7
Q ss_pred HhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHH
Q 020274 141 EQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLL 220 (328)
Q Consensus 141 ~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll 220 (328)
..+..+.++.+++.|.+++.. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+
T Consensus 32 ~~~~~~~v~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 110 (253)
T 1yyh_A 32 EEDAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 110 (253)
T ss_dssp --------------------C-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cCCChHHHHHHHHccCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 344788899999999887533 3788999999999999999999999999999999999999999999999999999999
Q ss_pred HCCC-CCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 020274 221 RKGA-NPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDG 299 (328)
Q Consensus 221 ~~g~-d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G 299 (328)
++|. +++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 111 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 190 (253)
T 1yyh_A 111 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 190 (253)
T ss_dssp HSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 300 KTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 300 ~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
.||||+|+..|+ .+++++|....
T Consensus 191 ~tpL~~A~~~~~----~~~v~~Ll~~g 213 (253)
T 1yyh_A 191 ETPLFLAAREGS----YETAKVLLDHF 213 (253)
T ss_dssp CCHHHHHHHHTC----HHHHHHHHHTT
T ss_pred CCHHHHHHHCCC----HHHHHHHHHcC
Confidence 999999999999 99999998764
No 13
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.4e-33 Score=247.38 Aligned_cols=176 Identities=22% Similarity=0.312 Sum_probs=97.7
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCC-CCCCccCCCCCcHHHHHHHcCC
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGG-LDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-adi~~~d~~g~t~L~~A~~~g~ 212 (328)
..++.|+..+..+.++.+++.|.+++.. +..|.||||+|+..|+.+++++|++.| .+++..+..|.||||+|+..++
T Consensus 46 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 123 (237)
T 3b7b_A 46 TPLMEAAENNHLEAVKYLIKAGALVDPK--DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCCCC--CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHhCCHHHHHHHHhCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC
Confidence 3455555555555555555555444332 444555555555555555555555555 4555555555555555555555
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADK 292 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 292 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 124 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 124 VDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203 (237)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCCCCCCCcHHHHHHHcCC
Q 020274 293 SRKTKDGKTALDMSLCYGR 311 (328)
Q Consensus 293 ~~~d~~G~TpL~~A~~~g~ 311 (328)
+.+|..|+||||+|+.+|+
T Consensus 204 ~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 204 TLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp TCCCTTSCCHHHHSCTTCH
T ss_pred CccCCCCCCHHHHHHHHHH
Confidence 5555555555555555554
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=260.58 Aligned_cols=189 Identities=27% Similarity=0.344 Sum_probs=152.1
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCC------CCCCCCCCCcHHHHHHHhCCH-HHHHHHHHCCCCCCccCCCCCcHHHH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPN------LGKISTAKWRPLQTLTLSMQI-RYMDMLLDGGLDIDSVDKDGLTALHK 206 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~------~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~gadi~~~d~~g~t~L~~ 206 (328)
..|+.|+..|+.+.++.||+.+..+. ....+..+.||||.|+..+.. .++++|++.|+++|.+|..|+||||+
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~ 92 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHV 92 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 57999999999999999999887643 344567899999999988876 48899999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 020274 207 AIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLL 286 (328)
Q Consensus 207 A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll 286 (328)
|+..|+.++|++|++.|++++.++..|.||+|+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+
T Consensus 93 A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 172 (269)
T 4b93_B 93 AALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLL 172 (269)
T ss_dssp HHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHH
T ss_pred HHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 287 INGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 287 ~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
++|++++.++..|.||||+|+.+|+ .+++++|....
T Consensus 173 ~~gadvn~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~G 208 (269)
T 4b93_B 173 QHGASINASNNKGNTALHEAVIEKH----VFVVELLLLHG 208 (269)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHTTC----HHHHHHHHHTT
T ss_pred HCCCCCCccccCCCcHHHHHHHcCC----HHHHHHHHHCC
Confidence 9999999999999999999999999 99999998764
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.2e-33 Score=246.12 Aligned_cols=184 Identities=23% Similarity=0.208 Sum_probs=123.6
Q ss_pred HHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCC--CCCCc-cCCCCCcHHHHHHHcC
Q 020274 135 DLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGG--LDIDS-VDKDGLTALHKAIIGK 211 (328)
Q Consensus 135 ~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--adi~~-~d~~g~t~L~~A~~~g 211 (328)
.++.|+..+..+.++.+++.+..... ..+..|+||||+|+..|+.+++++|++.| ++++. .+..|.||||+|+..|
T Consensus 5 ~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~ 83 (228)
T 2dzn_A 5 PLHQACMENEFFKVQELLHSKPSLLL-QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVG 83 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGGGTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHC
T ss_pred HHHHHHHhCCHHHHHHHHhcCccccc-cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcC
Confidence 45666666777777777666654432 23556667777777777777777777766 44444 5566667777777777
Q ss_pred CHHHHHHHHHCC--CCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 020274 212 KEAVISHLLRKG--ANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING 289 (328)
Q Consensus 212 ~~~~v~~Ll~~g--~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 289 (328)
+.+++++|+++| ++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|
T Consensus 84 ~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 84 NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163 (228)
T ss_dssp CHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 777777777766 666666666777777777777777777777777777766666777777777777777777777766
Q ss_pred -CCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHh
Q 020274 290 -ADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 323 (328)
Q Consensus 290 -ad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~ 323 (328)
++++.+|..|+||||+|+..|+ .+++++|.
T Consensus 164 ~~~~~~~d~~g~t~L~~A~~~~~----~~~v~~Ll 194 (228)
T 2dzn_A 164 KSAVNWQDKQGWTPLFHALAEGH----GDAAVLLV 194 (228)
T ss_dssp CCCSCCCCTTSCCHHHHHHHTTC----HHHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHcCC----HHHHHHHH
Confidence 6677777777777777777666 66666665
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.6e-33 Score=245.85 Aligned_cols=187 Identities=24% Similarity=0.331 Sum_probs=140.5
Q ss_pred HHHHHHHHhhChHHHHHHHh----cCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHH
Q 020274 134 EDLLKEVEQLLEPEEREILN----QNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAII 209 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~----~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~ 209 (328)
..++.|+..|..+.++.+++ .+.+++. .+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+.
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 88 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDI--YNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 88 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCc--ccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 45677777777777777775 4544443 36667777777777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHHCCC----CCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCCcHHHHHHHcCCHHHHHH
Q 020274 210 GKKEAVISHLLRKGA----NPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVAD-NEGWTPLHIAIQSRNRDIAKV 284 (328)
Q Consensus 210 ~g~~~~v~~Ll~~g~----d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d-~~g~TpL~~A~~~g~~~iv~~ 284 (328)
.|+.+++++|+++|+ +++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++
T Consensus 89 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 168 (241)
T 1k1a_A 89 HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQL 168 (241)
T ss_dssp TTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHH
Confidence 777777777777776 667777777777777777777777777777777777777 667777777777777777777
Q ss_pred HHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 285 LLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 285 Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
|+++|++++.++..|.||||+|+..|+ .+++++|....
T Consensus 169 Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g 206 (241)
T 1k1a_A 169 LLQHGANVNAQMYSGSSALHSASGRGL----LPLVRTLVRSG 206 (241)
T ss_dssp HHHTTCCTTCBCTTSCBHHHHHHHHTC----HHHHHHHHHTT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCC----HHHHHHHHhcC
Confidence 777777777777777777777777777 77777776543
No 17
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3.8e-35 Score=257.91 Aligned_cols=190 Identities=25% Similarity=0.267 Sum_probs=173.5
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCC--CCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATP--NLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g 211 (328)
..|+.|+..+..+.++.+++.+... +++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 10 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 89 (236)
T 1ikn_D 10 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQG 89 (236)
T ss_dssp CTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHT
T ss_pred chhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 4578899999999999998877643 45566889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCC------CCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCC-CCCcHHHHHHHcCCHHHHHH
Q 020274 212 KEAVISHLLRKGAN------PHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADN-EGWTPLHIAIQSRNRDIAKV 284 (328)
Q Consensus 212 ~~~~v~~Ll~~g~d------~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~-~g~TpL~~A~~~g~~~iv~~ 284 (328)
+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++
T Consensus 90 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 169 (236)
T 1ikn_D 90 CLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSL 169 (236)
T ss_dssp CHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999976 466788999999999999999999999999999999998 99999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 285 LLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 285 Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
|+++|++++.+|..|.||||+|+.+|+ .+++++|.....
T Consensus 170 Ll~~ga~~~~~~~~g~tpl~~A~~~~~----~~~~~~Ll~~ga 208 (236)
T 1ikn_D 170 LLKCGADVNRVTYQGYSPYQLTWGRPS----TRIQQQLGQLTL 208 (236)
T ss_dssp HHTTTCCSCCCCTTCCCGGGGCTTSSC----HHHHHHHHTTSC
T ss_pred HHHcCCCCCcccCCCCCHHHHHHccCc----hHHHHHHHHcch
Confidence 999999999999999999999999999 999999987653
No 18
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=9e-34 Score=248.64 Aligned_cols=189 Identities=26% Similarity=0.295 Sum_probs=180.0
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..|..+.++.+++.|.+++.. +..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 89 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTC--SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGH 89 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCcc--CCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 35689999999999999999999887654 7789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCC-CCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 020274 213 EAVISHLLRKG-ANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 291 (328)
Q Consensus 213 ~~~v~~Ll~~g-~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 291 (328)
.+++++|+++| .+++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 90 ~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 169 (237)
T 3b7b_A 90 YEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD 169 (237)
T ss_dssp HHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCC
T ss_pred HHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 292 KSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 292 ~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
++.+|..|.||||+|+..|+ .+++++|.....
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~ga 201 (237)
T 3b7b_A 170 LHAVNIHGDSPLHIAARENR----YDCVVLFLSRDS 201 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTC----HHHHHHHHTTTC
T ss_pred CCCcCCCCCCHHHHHHHhCC----HhHHHHHHHcCC
Confidence 99999999999999999998 999999987643
No 19
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=5.2e-34 Score=243.01 Aligned_cols=160 Identities=28% Similarity=0.342 Sum_probs=155.4
Q ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHH
Q 020274 162 KISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAV 241 (328)
Q Consensus 162 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~ 241 (328)
..+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHH
Q 020274 242 QVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKL 321 (328)
Q Consensus 242 ~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~l 321 (328)
..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+ .+++++
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~~v~~ 185 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR----QEVIKI 185 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC----HHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCc----HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HhhC
Q 020274 322 LKIL 325 (328)
Q Consensus 322 L~~~ 325 (328)
|...
T Consensus 186 Ll~~ 189 (192)
T 2rfm_A 186 FTEV 189 (192)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8753
No 20
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.7e-34 Score=255.45 Aligned_cols=188 Identities=20% Similarity=0.182 Sum_probs=170.3
Q ss_pred HHHHHHHHhhChHHH----HHHHhcCCCCCCC--CCCCCCCcHHHHHHHh---CCHHHHHHHHHCCCCCCcc--------
Q 020274 134 EDLLKEVEQLLEPEE----REILNQNATPNLG--KISTAKWRPLQTLTLS---MQIRYMDMLLDGGLDIDSV-------- 196 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v----~~lL~~g~~~~~~--~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~gadi~~~-------- 196 (328)
..|+.|+..|+.+.+ +.+++.|.+++.. ..+..|+||||+|+.. |+.+++++|++.|++++..
T Consensus 4 t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 83 (256)
T 2etb_A 4 DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQC 83 (256)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCC
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccc
Confidence 468999999999755 4555578877651 1478999999999999 9999999999999887643
Q ss_pred ---CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-------------CChHHHHHHHcCCHHHHHHHHh---CCC
Q 020274 197 ---DKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGD-------------GATPLHYAVQVGAMQSVKLLIK---YNV 257 (328)
Q Consensus 197 ---d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~-------------g~tpLh~A~~~g~~~iv~~Ll~---~ga 257 (328)
+..|.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|+.+++++|++ +|+
T Consensus 84 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga 163 (256)
T 2etb_A 84 TDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA 163 (256)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 367999999999999999999999999999999886 9999999999999999999999 999
Q ss_pred CccccCCCCCcHHHHHHH--cCCHH-------HHHHHHHcCCCC-------CCCCCCCCcHHHHHHHcCCCCChHHHHHH
Q 020274 258 DVNVADNEGWTPLHIAIQ--SRNRD-------IAKVLLINGADK-------SRKTKDGKTALDMSLCYGRDFKSYDLAKL 321 (328)
Q Consensus 258 ~in~~d~~g~TpL~~A~~--~g~~~-------iv~~Ll~~gad~-------~~~d~~G~TpL~~A~~~g~~~~~~~i~~l 321 (328)
+++.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+ .+++++
T Consensus 164 ~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~----~~~v~~ 239 (256)
T 2etb_A 164 SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGK----IEIFRH 239 (256)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC----HHHHHH
T ss_pred CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCC----HHHHHH
Confidence 999999999999999999 78888 999999999999 9999999999999999999 999999
Q ss_pred HhhC
Q 020274 322 LKIL 325 (328)
Q Consensus 322 L~~~ 325 (328)
|...
T Consensus 240 Ll~~ 243 (256)
T 2etb_A 240 ILQR 243 (256)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 8764
No 21
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=9.9e-34 Score=264.64 Aligned_cols=186 Identities=21% Similarity=0.192 Sum_probs=162.1
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCc------------------
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDS------------------ 195 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~------------------ 195 (328)
..|+.|+..|..+.++.|++.|.+++.. +..|+||||+|+..|+.++|++|+++|++++.
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~ 99 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIETGVSPTIQ--NRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDL 99 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCcccc--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHH
Confidence 4567777777777777777777665543 56677777777777777777777776665544
Q ss_pred ----------------------------------cCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCChHHHH
Q 020274 196 ----------------------------------VDKDGLTALHKAIIGK--KEAVISHLLRKGANPHVKDGDGATPLHY 239 (328)
Q Consensus 196 ----------------------------------~d~~g~t~L~~A~~~g--~~~~v~~Ll~~g~d~~~~d~~g~tpLh~ 239 (328)
++..|.||||+|+..| +.+++++|+++|++++.++..|.||||+
T Consensus 100 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 179 (364)
T 3ljn_A 100 VVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMR 179 (364)
T ss_dssp HHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 6778999999999999 9999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCC-----ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCC
Q 020274 240 AVQVGAMQSVKLLIKYNVD-----VNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFK 314 (328)
Q Consensus 240 A~~~g~~~iv~~Ll~~ga~-----in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~ 314 (328)
|+..|+.+++++|+++|++ ++..+..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+
T Consensus 180 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~--- 256 (364)
T 3ljn_A 180 AMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAM--- 256 (364)
T ss_dssp HHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCC---
T ss_pred HHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCh---
Confidence 9999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhC
Q 020274 315 SYDLAKLLKIL 325 (328)
Q Consensus 315 ~~~i~~lL~~~ 325 (328)
.+++++|...
T Consensus 257 -~~~v~~Ll~~ 266 (364)
T 3ljn_A 257 -VLLTKELLQK 266 (364)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHc
Confidence 9999998764
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.9e-34 Score=250.51 Aligned_cols=189 Identities=25% Similarity=0.276 Sum_probs=175.1
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCC----CCCccCCCCCcHHHHHH
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGL----DIDSVDKDGLTALHKAI 208 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----di~~~d~~g~t~L~~A~ 208 (328)
...++.|+..+..+.++.|++.|.+++.. +..|+||||+|+..|+.+++++|++.|+ +++.++..|.||||+|+
T Consensus 47 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~ 124 (241)
T 1k1a_A 47 QTPLHLAVITTLPSVVRLLVTAGASPMAL--DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHH
Confidence 35689999999999999999999887754 7789999999999999999999999987 88999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 020274 209 IGKKEAVISHLLRKGANPHVKD-GDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLI 287 (328)
Q Consensus 209 ~~g~~~~v~~Ll~~g~d~~~~d-~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 287 (328)
..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus 125 ~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 204 (241)
T 1k1a_A 125 NTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR 204 (241)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999999999988 789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 288 NGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 288 ~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
+|++++.+|..|+||||+|+..|+ .++++.|...|.
T Consensus 205 ~ga~~~~~~~~g~tpl~~A~~~~~----~~i~~~l~~~~a 240 (241)
T 1k1a_A 205 SGADSSLKNCHNDTPLMVARSRRV----IDILRGKATRPA 240 (241)
T ss_dssp TTCCTTCCCTTSCCTTTTCSSHHH----HHHHTC------
T ss_pred cCCCCCCcCCCCCCHHHHHHhcCc----HHHHhhhccCCC
Confidence 999999999999999999999998 999998877653
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-33 Score=255.41 Aligned_cols=187 Identities=26% Similarity=0.337 Sum_probs=153.9
Q ss_pred ccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 020274 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 132 ~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g 211 (328)
....++.|+..|..+.++.+++.|.+++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINY--ANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTC--BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 34578999999999999999999988765 4788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCC-----------------------------------------------------------
Q 020274 212 KEAVISHLLRKGANPHVKDGD----------------------------------------------------------- 232 (328)
Q Consensus 212 ~~~~v~~Ll~~g~d~~~~d~~----------------------------------------------------------- 232 (328)
+.+++++|+++|++++.++..
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 999999999999999876654
Q ss_pred -CChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 020274 233 -GATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGR 311 (328)
Q Consensus 233 -g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~ 311 (328)
|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+....
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 277 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL 277 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGG
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHH
Confidence 5566777777777777777777777777777777777777777777777777777777777777777777777755433
Q ss_pred CCChHHHHHHHhh
Q 020274 312 DFKSYDLAKLLKI 324 (328)
Q Consensus 312 ~~~~~~i~~lL~~ 324 (328)
..+.++++.
T Consensus 278 ----~~l~~l~~~ 286 (299)
T 1s70_B 278 ----GYLEELQKK 286 (299)
T ss_dssp ----HHHHHHHHH
T ss_pred ----HHHHHHHHH
Confidence 444444443
No 24
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-33 Score=252.32 Aligned_cols=185 Identities=25% Similarity=0.317 Sum_probs=166.4
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKE 213 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~ 213 (328)
..|+.|+..+..+.++.|++.|.+++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~ 138 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLISQGWAVNI--ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 138 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCE--ECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHH
Confidence 468889999999999999998877654 477899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 020274 214 AVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKS 293 (328)
Q Consensus 214 ~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 293 (328)
+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 139 ~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 139 DCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 217 (285)
T ss_dssp HHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC
Confidence 99999999999987644 59999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 294 RKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 294 ~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
. +..|.||||+|+..|+ .+++++|....
T Consensus 218 ~-~~~g~t~L~~A~~~~~----~~~v~~Ll~~g 245 (285)
T 3d9h_A 218 Q-GKGQDSPLHAVVRTAS----EELACLLMDFG 245 (285)
T ss_dssp C-CBTTBCHHHHHHHTTC----HHHHHHHHHTT
T ss_pred C-CCCCCCHHHHHHHcCC----HHHHHHHHHCC
Confidence 4 8889999999999998 89999887764
No 25
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.9e-33 Score=234.92 Aligned_cols=158 Identities=35% Similarity=0.499 Sum_probs=152.8
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHc
Q 020274 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQV 243 (328)
Q Consensus 164 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 243 (328)
...+.++|+.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHh
Q 020274 244 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 323 (328)
Q Consensus 244 g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~ 323 (328)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+.+|+ .+++++|.
T Consensus 91 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~----~~~~~~L~ 166 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGN----EDLAEILQ 166 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC----HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999998
Q ss_pred hC
Q 020274 324 IL 325 (328)
Q Consensus 324 ~~ 325 (328)
.+
T Consensus 167 ~~ 168 (169)
T 2y1l_E 167 KL 168 (169)
T ss_dssp TC
T ss_pred Hc
Confidence 75
No 26
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.9e-33 Score=234.07 Aligned_cols=155 Identities=27% Similarity=0.400 Sum_probs=151.3
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC
Q 020274 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGA 245 (328)
Q Consensus 166 ~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 245 (328)
.|.||||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 246 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 246 ~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+ .+++++|..
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~----~~~~~~L~~ 156 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY----RSVQQVIES 156 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc----HHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 899988865
No 27
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.3e-33 Score=244.42 Aligned_cols=185 Identities=26% Similarity=0.359 Sum_probs=174.4
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCC-CCCCCCcHHHHHHHhCCHHHHHHHHHCC--CCCCccCCCCCcHHHHHHH
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGK-ISTAKWRPLQTLTLSMQIRYMDMLLDGG--LDIDSVDKDGLTALHKAII 209 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--adi~~~d~~g~t~L~~A~~ 209 (328)
...++.|+..+..+.++.+++.+.+++... .+..|+||||+|+..|+.+++++|+++| ++++.++..|.||||+|+.
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~ 116 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVG 116 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHH
Confidence 457889999999999999999998777776 7889999999999999999999999999 8999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCC-CCccccCCCCCcHHHHHHHcCCHHHHHHHH-H
Q 020274 210 GKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYN-VDVNVADNEGWTPLHIAIQSRNRDIAKVLL-I 287 (328)
Q Consensus 210 ~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~g-a~in~~d~~g~TpL~~A~~~g~~~iv~~Ll-~ 287 (328)
.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ +
T Consensus 117 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 196 (228)
T 2dzn_A 117 KKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196 (228)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 999999999999999999999999999999 8
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 288 NGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 288 ~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
+|++++.+|..|+|||++|+.. +++++|..
T Consensus 197 ~ga~~~~~~~~g~t~l~~A~~~-------~~~~~l~~ 226 (228)
T 2dzn_A 197 YGAEYDLVDNKGAKAEDVALNE-------QVKKFFLN 226 (228)
T ss_dssp HCCCSCCBCTTSCBGGGGCSST-------THHHHHHT
T ss_pred cCCCCCccCCCCCcHHHHHHHH-------HHHHHHHh
Confidence 9999999999999999999653 56677664
No 28
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.6e-33 Score=243.46 Aligned_cols=176 Identities=28% Similarity=0.302 Sum_probs=164.5
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCC-
Q 020274 146 PEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGA- 224 (328)
Q Consensus 146 ~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~- 224 (328)
+.++.+++.|.+++.. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|.
T Consensus 5 ~~i~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 83 (223)
T 2f8y_A 5 AVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 83 (223)
T ss_dssp CCEETTEETTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS
T ss_pred HHHHHHHHcCCCcccc-cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3445667777776543 36789999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 020274 225 NPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALD 304 (328)
Q Consensus 225 d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~ 304 (328)
+++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 163 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 163 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCChHHHHHHHhhCC
Q 020274 305 MSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 305 ~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
+|+..|+ .+++++|....
T Consensus 164 ~A~~~~~----~~~v~~Ll~~g 181 (223)
T 2f8y_A 164 LAAREGS----YETAKVLLDHF 181 (223)
T ss_dssp HHHHHTC----HHHHHHHHHTT
T ss_pred HHHHcCC----HHHHHHHHHcC
Confidence 9999999 99999998764
No 29
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=4.4e-34 Score=254.52 Aligned_cols=188 Identities=22% Similarity=0.190 Sum_probs=170.0
Q ss_pred HHHHHHHHhhChHHHHHHHh----cCCCCCCCC--CCCCCCcHHHHHH---HhCCHHHHHHHHHCCCC-----------C
Q 020274 134 EDLLKEVEQLLEPEEREILN----QNATPNLGK--ISTAKWRPLQTLT---LSMQIRYMDMLLDGGLD-----------I 193 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~----~g~~~~~~~--~~~~g~t~L~~A~---~~g~~~~v~~Ll~~gad-----------i 193 (328)
..++.|++.|+.+.++.+++ .+.+.+... .+..|+||||+|+ ..|+.+++++|++.|++ +
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 86 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPF 86 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCB
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccc
Confidence 56899999999997777776 888877553 2477999999999 67999999999998754 4
Q ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC--------------CCCChHHHHHHHcCCHHHHHHHHh---CC
Q 020274 194 DSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKD--------------GDGATPLHYAVQVGAMQSVKLLIK---YN 256 (328)
Q Consensus 194 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d--------------~~g~tpLh~A~~~g~~~iv~~Ll~---~g 256 (328)
+..+..|+||||+|+..|+.++|++|+++|++++.++ ..|+||||+|+..|+.+++++|++ +|
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 4455689999999999999999999999999999998 689999999999999999999999 99
Q ss_pred CCccccCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCC-------CCCCCCCCcHHHHHHHcCCCCChHHHHH
Q 020274 257 VDVNVADNEGWTPLHIAIQSRN---------RDIAKVLLINGADK-------SRKTKDGKTALDMSLCYGRDFKSYDLAK 320 (328)
Q Consensus 257 a~in~~d~~g~TpL~~A~~~g~---------~~iv~~Ll~~gad~-------~~~d~~G~TpL~~A~~~g~~~~~~~i~~ 320 (328)
++++.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|+.+|+ .++++
T Consensus 167 a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~----~~~v~ 242 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK----IGIFQ 242 (260)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC----HHHHH
T ss_pred CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC----HHHHH
Confidence 9999999999999999999888 79999999999999 7899999999999999999 99999
Q ss_pred HHhhC
Q 020274 321 LLKIL 325 (328)
Q Consensus 321 lL~~~ 325 (328)
+|...
T Consensus 243 ~Ll~~ 247 (260)
T 3jxi_A 243 HIIRR 247 (260)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88753
No 30
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.4e-32 Score=253.65 Aligned_cols=188 Identities=25% Similarity=0.283 Sum_probs=155.6
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKE 213 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~ 213 (328)
..|+.|+..+..+.++.|++.|.+++.. +..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 60 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 137 (351)
T 3utm_A 60 TPLHLAAGYNRVRIVQLLLQHGADVHAK--DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRV 137 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 4577788888888888888887766543 66788888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHCCCCCCCCC------------------------------------------------------CCCChHHHH
Q 020274 214 AVISHLLRKGANPHVKD------------------------------------------------------GDGATPLHY 239 (328)
Q Consensus 214 ~~v~~Ll~~g~d~~~~d------------------------------------------------------~~g~tpLh~ 239 (328)
+++++|+++|++++..+ ..|.||||+
T Consensus 138 ~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~ 217 (351)
T 3utm_A 138 EVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHC 217 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHH
T ss_pred HHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHH
Confidence 88888888887776543 345677777
Q ss_pred HHHc---CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChH
Q 020274 240 AVQV---GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSY 316 (328)
Q Consensus 240 A~~~---g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~ 316 (328)
|+.. +..+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+ .
T Consensus 218 A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~----~ 293 (351)
T 3utm_A 218 AVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH----L 293 (351)
T ss_dssp HHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----H
T ss_pred HHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc----H
Confidence 7777 44778888888888888899999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHHhhCCC
Q 020274 317 DLAKLLKILPV 327 (328)
Q Consensus 317 ~i~~lL~~~~~ 327 (328)
+++++|.....
T Consensus 294 ~~v~~Ll~~ga 304 (351)
T 3utm_A 294 QTCRLLLSYGS 304 (351)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 99999987643
No 31
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=6.2e-33 Score=227.93 Aligned_cols=151 Identities=30% Similarity=0.353 Sum_probs=146.6
Q ss_pred CcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHH
Q 020274 168 WRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQ 247 (328)
Q Consensus 168 ~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~ 247 (328)
.|+||.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 589999999999999999999999887 5888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHh
Q 020274 248 SVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 323 (328)
Q Consensus 248 iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~ 323 (328)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.+|+ .+++++|+
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~i~~~L~ 153 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGN----EDLAEILQ 153 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC----HHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999985
No 32
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-32 Score=263.56 Aligned_cols=188 Identities=28% Similarity=0.369 Sum_probs=168.2
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.++..+..+.++.|++.|.+++.. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 213 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~ 290 (437)
T 1n11_A 213 YTPLHIAAKQNQVEVARSLLQYGGSANAE--SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH 290 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 45678888888888888888888776554 6778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADK 292 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 292 (328)
.+++++|+++|++++.++..|+||||+|+..|+.++|++|+++|++++.++..|.||||+|+..|+.++|++|+++|+++
T Consensus 291 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 291 VPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp HHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 293 SRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 293 ~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
+.+|..|+|||++|+..|+ .+++++|+...
T Consensus 371 ~~~~~~g~t~l~~A~~~g~----~~~~~~l~~~~ 400 (437)
T 1n11_A 371 NEVSSDGTTPLAIAKRLGY----ISVTDVLKVVT 400 (437)
T ss_dssp CCCCSSSCCHHHHHHHTTC----HHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHcCc----HHHHHHHHhcc
Confidence 9999999999999999998 88888887654
No 33
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.2e-32 Score=242.42 Aligned_cols=186 Identities=27% Similarity=0.357 Sum_probs=146.7
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..+..+.++.|++.|.+++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 40 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 117 (285)
T 1wdy_A 40 WTPLHNAVQMSREDIVELLLRHGADPVLR--KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 117 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC
Confidence 45677777777777788888777766543 5677788888888888888888888888887777778888888888888
Q ss_pred HHHHHHHHHCCCCCCCC----------CCCCChHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCCcHHHHHHHcCC---
Q 020274 213 EAVISHLLRKGANPHVK----------DGDGATPLHYAVQVGAMQSVKLLIKY-NVDVNVADNEGWTPLHIAIQSRN--- 278 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~----------d~~g~tpLh~A~~~g~~~iv~~Ll~~-ga~in~~d~~g~TpL~~A~~~g~--- 278 (328)
.+++++|+++|++++.+ +..|.||||+|+..|+.+++++|+++ |++++..+..|.||||+|+..++
T Consensus 118 ~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 197 (285)
T 1wdy_A 118 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD 197 (285)
T ss_dssp HHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTT
T ss_pred HHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccch
Confidence 88888888888777766 66677888888888888888888876 88888888888888888888887
Q ss_pred -HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 279 -RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 279 -~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
.+++++|+++|++++.++..|.||||+|+..|+ .+++++|..
T Consensus 198 ~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~ 240 (285)
T 1wdy_A 198 VEAITHLLLDHGADVNVRGERGKTPLILAVEKKH----LGLVQRLLE 240 (285)
T ss_dssp HHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTC----HHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC----HHHHHHHHh
Confidence 778888888888888888888888888888887 788887765
No 34
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=4.5e-34 Score=256.60 Aligned_cols=191 Identities=22% Similarity=0.236 Sum_probs=170.2
Q ss_pred ccHHHHHHHHhhChHHHHHHHhcC----CCCCCC--CCCCCCCcHHHHHHHh---CCHHHHHHHHHCCCCC-------Cc
Q 020274 132 YEEDLLKEVEQLLEPEEREILNQN----ATPNLG--KISTAKWRPLQTLTLS---MQIRYMDMLLDGGLDI-------DS 195 (328)
Q Consensus 132 ~~~~l~~ai~~~~~~~v~~lL~~g----~~~~~~--~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~gadi-------~~ 195 (328)
....|+.|+..|..+.++.+++.+ .+.+.. ..+..|+||||+|+.. |+.+++++|+++|+++ +.
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 346799999999999999998743 332211 2477899999999987 9999999999998653 22
Q ss_pred ----cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--------------CCChHHHHHHHcCCHHHHHHHHh---
Q 020274 196 ----VDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDG--------------DGATPLHYAVQVGAMQSVKLLIK--- 254 (328)
Q Consensus 196 ----~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~--------------~g~tpLh~A~~~g~~~iv~~Ll~--- 254 (328)
++..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|++
T Consensus 93 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW 172 (273)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 567899999999999999999999999999999987 79999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCCC-------CCCCCCCcHHHHHHHcCCCCChHHH
Q 020274 255 YNVDVNVADNEGWTPLHIAIQSRN---------RDIAKVLLINGADKS-------RKTKDGKTALDMSLCYGRDFKSYDL 318 (328)
Q Consensus 255 ~ga~in~~d~~g~TpL~~A~~~g~---------~~iv~~Ll~~gad~~-------~~d~~G~TpL~~A~~~g~~~~~~~i 318 (328)
+|++++.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..|+ .++
T Consensus 173 ~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~----~~i 248 (273)
T 2pnn_A 173 QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK----IGV 248 (273)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC----HHH
T ss_pred CCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh----HHH
Confidence 999999999999999999999998 899999999999997 589999999999999999 999
Q ss_pred HHHHhhCC
Q 020274 319 AKLLKILP 326 (328)
Q Consensus 319 ~~lL~~~~ 326 (328)
+++|....
T Consensus 249 v~~Ll~~g 256 (273)
T 2pnn_A 249 LAYILQRE 256 (273)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHCC
Confidence 99997643
No 35
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=8.3e-34 Score=256.31 Aligned_cols=185 Identities=24% Similarity=0.288 Sum_probs=170.0
Q ss_pred HHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCC-CCCccCCCCCcHHHHHH-----Hc
Q 020274 137 LKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGL-DIDSVDKDGLTALHKAI-----IG 210 (328)
Q Consensus 137 ~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-di~~~d~~g~t~L~~A~-----~~ 210 (328)
+.++..+....++.++..+.+..++..+..|+||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+ ..
T Consensus 81 ~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~ 160 (276)
T 4hbd_A 81 HPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQ 160 (276)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSH
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhh
Confidence 3456666777777777766554455568899999999999999999999999998 99999999999999999 66
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH-cC
Q 020274 211 KKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLI-NG 289 (328)
Q Consensus 211 g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~-~g 289 (328)
++.+++++|++.|.+++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ +|
T Consensus 161 ~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 240 (276)
T 4hbd_A 161 DDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS 240 (276)
T ss_dssp HHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT
T ss_pred hhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 290 ADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 290 ad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
++++.+|..|.||||+|+.+|+ .+++++|...
T Consensus 241 ad~~~~d~~g~TpL~~A~~~g~----~~iv~~Ll~~ 272 (276)
T 4hbd_A 241 CDISLTDRDGSTALMVALDAGQ----SEIASMLYSR 272 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTC----HHHHHHHHHH
T ss_pred CCCcCcCCCCCCHHHHHHHcCC----HHHHHHHHhc
Confidence 9999999999999999999999 9999988753
No 36
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=6e-33 Score=229.46 Aligned_cols=157 Identities=26% Similarity=0.444 Sum_probs=149.7
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC
Q 020274 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGA 245 (328)
Q Consensus 166 ~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 245 (328)
...||||.|+..|+.+++++|++.|++++.++..|.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 45699999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 246 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD-KSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 246 ~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+.+|+ .+++++|..
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~----~~~~~~Ll~ 158 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR----NEVVSLMQA 158 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC----HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 59999999999999999999 999999987
Q ss_pred CCC
Q 020274 325 LPV 327 (328)
Q Consensus 325 ~~~ 327 (328)
...
T Consensus 159 ~GA 161 (162)
T 1ihb_A 159 NGA 161 (162)
T ss_dssp TC-
T ss_pred hCC
Confidence 654
No 37
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.2e-32 Score=251.82 Aligned_cols=189 Identities=27% Similarity=0.359 Sum_probs=146.5
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCc-----------------
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDS----------------- 195 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~----------------- 195 (328)
...|+.|++.++.+.|+.||+.|++++... +..|+||||+|+..|+.++|++|+++|++++.
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~-~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 456999999999999999999999987652 34689999999999999999999999886543
Q ss_pred ----------------cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC----------CCCCChHHHHHHHcCCHHHH
Q 020274 196 ----------------VDKDGLTALHKAIIGKKEAVISHLLRKGANPHVK----------DGDGATPLHYAVQVGAMQSV 249 (328)
Q Consensus 196 ----------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~----------d~~g~tpLh~A~~~g~~~iv 249 (328)
++..|.||||+|+..|+.+++++|+++|++++.+ +..|.||||+|+..|+.++|
T Consensus 105 ~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v 184 (337)
T 4g8k_A 105 VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 184 (337)
T ss_dssp HHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHH
T ss_pred chhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHH
Confidence 4455667777777777777777777776666533 23466677777666666666
Q ss_pred HHHH--------------------------------------hCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CC
Q 020274 250 KLLI--------------------------------------KYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLIN-GA 290 (328)
Q Consensus 250 ~~Ll--------------------------------------~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-ga 290 (328)
++|| ++|++++.++..|+||||+|+..|+.+++++|+.+ |+
T Consensus 185 ~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~ 264 (337)
T 4g8k_A 185 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 264 (337)
T ss_dssp HHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTC
T ss_pred HHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCC
Confidence 5555 44555666677788888888888888888888875 78
Q ss_pred CCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 291 DKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 291 d~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
+++.+|..|+||||+|+.+|+ .+++++|....
T Consensus 265 ~vn~~d~~G~TpL~~A~~~g~----~~iv~~Ll~~G 296 (337)
T 4g8k_A 265 EINDTDSDGKTALLLAVELKL----KKIAELLCKRG 296 (337)
T ss_dssp CTTCBCTTSCBHHHHHHHTTC----HHHHHHHHTTS
T ss_pred cccCcCCCCCCHHHHHHHcCC----HHHHHHHHHCC
Confidence 888888888899998888888 88888887654
No 38
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.2e-32 Score=241.52 Aligned_cols=189 Identities=23% Similarity=0.238 Sum_probs=178.8
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCcc----------CCCCCc
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSV----------DKDGLT 202 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~----------d~~g~t 202 (328)
...++.|+..+..+.++.+++.|.+++.. +..|+||||+|+..|+.+++++|+++|++++.. +..|.|
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t 150 (285)
T 1wdy_A 73 ATPFLLAAIAGSVKLLKLFLSKGADVNEC--DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT 150 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCB--CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcc--CcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCc
Confidence 45789999999999999999999887654 788999999999999999999999999999987 778999
Q ss_pred HHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCChHHHHHHHcCC----HHHHHHHHhCCCCccccCCCCCcHHHHHHHcC
Q 020274 203 ALHKAIIGKKEAVISHLLRK-GANPHVKDGDGATPLHYAVQVGA----MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSR 277 (328)
Q Consensus 203 ~L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpLh~A~~~g~----~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g 277 (328)
|||+|+..|+.+++++|+++ |++++.++..|.||||+|+..++ .+++++|+++|++++.++..|.||||+|+..|
T Consensus 151 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 230 (285)
T 1wdy_A 151 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 230 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 99999999999999999997 99999999999999999999999 99999999999999999999999999999999
Q ss_pred CHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 278 NRDIAKVLLI-NGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 278 ~~~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++++|.....
T Consensus 231 ~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~----~~i~~~Ll~~Ga 277 (285)
T 1wdy_A 231 HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL----KKIAELLCKRGA 277 (285)
T ss_dssp CHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHHSS
T ss_pred CHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCc----HHHHHHHHHcCC
Confidence 9999999999 899999999999999999999999 999999987543
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.7e-33 Score=255.29 Aligned_cols=185 Identities=17% Similarity=0.103 Sum_probs=173.7
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..+..+.++.|++.|.+++.. +|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN 107 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCC
Confidence 35689999999999999999999887754 48999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCC-ChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 020274 213 EAVISHLLRKGANPHVKDGDG-ATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 291 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g-~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 291 (328)
.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|+++... ..|.||||+|+..|+.+++++|+++|++
T Consensus 108 ~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad 186 (285)
T 3kea_A 108 MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTS 186 (285)
T ss_dssp HHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCC
Confidence 999999999999999999999 79999999999999999999999887332 2799999999999999999999999999
Q ss_pred CCCCCCCCCcH-HHHHHHcCCCCChHHHHHHHhhCC
Q 020274 292 KSRKTKDGKTA-LDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 292 ~~~~d~~G~Tp-L~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
++.++..|.|| ||+|+.+|+ .+++++|....
T Consensus 187 ~n~~~~~g~t~~L~~A~~~~~----~~~v~~Ll~~g 218 (285)
T 3kea_A 187 TNTNNSLLFIPDIKLAIDNKD----IEMLQALFKYD 218 (285)
T ss_dssp TCTTCCCBCCTTHHHHHHHTC----HHHHHHHTTSC
T ss_pred CCcccCCCCChHHHHHHHcCC----HHHHHHHHHcC
Confidence 99999999998 999999999 99999998764
No 40
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.8e-32 Score=249.53 Aligned_cols=189 Identities=27% Similarity=0.315 Sum_probs=173.8
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..|+.+.++.++... ..+.+..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 103 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGH 103 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCC
Confidence 45799999999999999999862 23344458889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccC-----------------------------
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVAD----------------------------- 263 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d----------------------------- 263 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 104 ~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~ 183 (351)
T 3utm_A 104 YEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLL 183 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHH
Confidence 999999999999999999999999999999999999999999999987654
Q ss_pred -------------------------CCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCh
Q 020274 264 -------------------------NEGWTPLHIAIQS---RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKS 315 (328)
Q Consensus 264 -------------------------~~g~TpL~~A~~~---g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~ 315 (328)
..|.||||+|+.. +..+++++|+++|++++.++..|.||||+|+.+|+
T Consensus 184 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~---- 259 (351)
T 3utm_A 184 QAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAH---- 259 (351)
T ss_dssp HHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC----
T ss_pred HHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCC----
Confidence 4567999999998 55899999999999999999999999999999999
Q ss_pred HHHHHHHhhCC
Q 020274 316 YDLAKLLKILP 326 (328)
Q Consensus 316 ~~i~~lL~~~~ 326 (328)
.+++++|...+
T Consensus 260 ~~~v~~Ll~~g 270 (351)
T 3utm_A 260 NDVMEVLHKHG 270 (351)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHCC
Confidence 89999998764
No 41
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.3e-32 Score=230.04 Aligned_cols=154 Identities=25% Similarity=0.366 Sum_probs=121.8
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHCCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC
Q 020274 167 KWRPLQTLTLSMQIRYMDMLLDGGLD-IDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGA 245 (328)
Q Consensus 167 g~t~L~~A~~~g~~~~v~~Ll~~gad-i~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 245 (328)
+.||||.|+..|+.++++.|++.|.+ ++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 45778888888888888888877766 67777778888888888888888888888888888777788888888888888
Q ss_pred HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 246 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 246 ~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+ .+++++|..
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~~~~~L~~ 156 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY----RKVQQVIEN 156 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCc----HHHHHHHHH
Confidence 888888888888888888888888888888888888888888888888888888888888888877 777777754
No 42
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-32 Score=258.53 Aligned_cols=192 Identities=22% Similarity=0.293 Sum_probs=179.1
Q ss_pred cccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCC---CCCCccCCCCCcHHHHH
Q 020274 131 KYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGG---LDIDSVDKDGLTALHKA 207 (328)
Q Consensus 131 ~~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---adi~~~d~~g~t~L~~A 207 (328)
.....|+.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|+++| ++++..+..|.||||+|
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A 242 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIY--NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 242 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCC--CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCCccc--CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHH
Confidence 3456789999999999999999999988754 778999999999999999999999998 89999999999999999
Q ss_pred HHcC---CHHHHHHHHHCCCCCCC--------CCCCCChHHHHHHHcCCHHHHHHHHhCC-CCccccCCCCCcHHHHHHH
Q 020274 208 IIGK---KEAVISHLLRKGANPHV--------KDGDGATPLHYAVQVGAMQSVKLLIKYN-VDVNVADNEGWTPLHIAIQ 275 (328)
Q Consensus 208 ~~~g---~~~~v~~Ll~~g~d~~~--------~d~~g~tpLh~A~~~g~~~iv~~Ll~~g-a~in~~d~~g~TpL~~A~~ 275 (328)
+..+ +.+++++|+++|++++. ++..|.||||+|+..|+.++|++|++++ ++++.+|..|.||||+|+.
T Consensus 243 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp HHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH
T ss_pred HHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHH
Confidence 9988 89999999999999986 5778999999999999999999999885 9999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCCC
Q 020274 276 SRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPVE 328 (328)
Q Consensus 276 ~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~~ 328 (328)
.|+.++|++|+++|++++.+|..|.||||+|+.+|+ .+|+++|.....+
T Consensus 323 ~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~----~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 323 EGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNH----HNIVDIFDRCRPE 371 (373)
T ss_dssp HTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTC----HHHHHHHHTTC--
T ss_pred cCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCC----HHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999 9999999987653
No 43
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-32 Score=246.95 Aligned_cols=189 Identities=18% Similarity=0.200 Sum_probs=155.3
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCC---------CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcH
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNAT---------PNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTA 203 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~---------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~ 203 (328)
...++.|+..|+...+..++..+.. ......+..|+||||+|+..|+.+++++|++.|++++.++..|.||
T Consensus 16 ~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 95 (285)
T 3d9h_A 16 PRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSP 95 (285)
T ss_dssp --------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCH
T ss_pred HHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 3457888899998888886654321 2244568899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 020274 204 LHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAK 283 (328)
Q Consensus 204 L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~ 283 (328)
||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..|+.++++
T Consensus 96 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~ 174 (285)
T 3d9h_A 96 LHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVN 174 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHH
T ss_pred HHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998654 4999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 284 VLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 284 ~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
+|+++|++++.++..|.||||+|+.+|+ .+++++|....
T Consensus 175 ~Ll~~g~~~~~~d~~g~t~L~~A~~~~~----~~~v~~Ll~~g 213 (285)
T 3d9h_A 175 SLIAYGGNIDHKISHLGTPLYLACENQQ----RACVKKLLESG 213 (285)
T ss_dssp HHHHTTCCTTCCBTTTBCHHHHHHHTTC----HHHHHHHHHTT
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHcCc----HHHHHHHHHCC
Confidence 9999999999999999999999999999 99999998764
No 44
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=244.75 Aligned_cols=183 Identities=22% Similarity=0.231 Sum_probs=169.4
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..+..+.++.+++.|.+++.. +..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+
T Consensus 37 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~ 113 (261)
T 2xai_A 37 VSPLHEACLGGHLSCVKILLKHGAQVNGV--TADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGH 113 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCc
Confidence 35789999999999999999999887654 78899999999999999999999999999986 4559999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADK 292 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 292 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|+++
T Consensus 114 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~ 192 (261)
T 2xai_A 114 VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADT 192 (261)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999995 888999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 293 SRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 293 ~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
+.+|..|+||||+|+.++ +++++|...
T Consensus 193 ~~~d~~g~tpl~~A~~~~------~~~~~ll~~ 219 (261)
T 2xai_A 193 QAKNAEGKRPVELVPPES------PLAQLFLER 219 (261)
T ss_dssp TCCCTTSCCGGGGSCTTC------THHHHHHHC
T ss_pred CCcCCCCCChhhhccccc------cHHHHHHhc
Confidence 999999999999999665 366666553
No 45
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.3e-32 Score=236.64 Aligned_cols=190 Identities=22% Similarity=0.254 Sum_probs=173.9
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..+..+.++.+++.+.+++... +..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 121 (240)
T 3eu9_A 43 VTLLHWAAINNRIDLVKYYISKGAIVDQLG-GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH 121 (240)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCB-TTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCcchhhc-CCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCH
Confidence 346889999999999999999988776432 4558999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC-HHHHHHHHhCCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCC
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGA-MQSVKLLIKYNVDVNVADN-EGWTPLHIAIQSRNRDIAKVLLINGA 290 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~-~~iv~~Ll~~ga~in~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~ga 290 (328)
.+++++|+++|++++.++..|.||||+|+..++ .+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|+
T Consensus 122 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 201 (240)
T 3eu9_A 122 TSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA 201 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999999999999997776 8899999999999999987 89999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 291 DKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 291 d~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
+++.++..|.|||++|+.+|+ .+++++|.....
T Consensus 202 ~~~~~~~~g~t~l~~A~~~~~----~~~v~~L~~~~~ 234 (240)
T 3eu9_A 202 NVDAQNIKGESALDLAKQRKN----VWMINHLQEARQ 234 (240)
T ss_dssp CTTCBCTTSCBHHHHHHHTTC----HHHHHHHHHHC-
T ss_pred CCCCcCCCCCCHHHHHHHcCc----HHHHHHHHHhhh
Confidence 999999999999999999999 999999987653
No 46
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.3e-32 Score=246.71 Aligned_cols=177 Identities=23% Similarity=0.222 Sum_probs=153.4
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCC--------------------
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLD-------------------- 192 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-------------------- 192 (328)
...|+.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|+++|++
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 46 QTALHLAAILGEASTVEKLYAAGAGVLVA--ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCC--CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 45789999999999999999999887754 77899999999999999999999998765
Q ss_pred ---------------------------CCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CChHHHHHHHcC
Q 020274 193 ---------------------------IDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGD-GATPLHYAVQVG 244 (328)
Q Consensus 193 ---------------------------i~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~-g~tpLh~A~~~g 244 (328)
++.++..|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 203 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC
Confidence 6778889999999999999999999999999999998864 999999999999
Q ss_pred CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 020274 245 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGR 311 (328)
Q Consensus 245 ~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~ 311 (328)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|.....
T Consensus 204 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 204 AASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred CHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999987654
No 47
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.8e-32 Score=257.63 Aligned_cols=189 Identities=28% Similarity=0.328 Sum_probs=177.1
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..+..+.++.+++.+.+++.. +..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 180 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 257 (437)
T 1n11_A 180 LTPLHVAVHHNNLDIVKLLLPRGGSPHSP--AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGH 257 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHGGGTCCSCCC--CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCC
Confidence 45688899999999999999998877653 6779999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADK 292 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 292 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++|++|+++|+++
T Consensus 258 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 337 (437)
T 1n11_A 258 AEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADV 337 (437)
T ss_dssp HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCT
T ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 293 SRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 293 ~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
+.++..|.||||+|+.+|+ .+++++|.....
T Consensus 338 n~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~ga 368 (437)
T 1n11_A 338 NAKTKLGYSPLHQAAQQGH----TDIVTLLLKNGA 368 (437)
T ss_dssp TCCCTTSCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHCCh----HHHHHHHHHCcC
Confidence 9999999999999999999 999999987643
No 48
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.1e-31 Score=234.87 Aligned_cols=161 Identities=22% Similarity=0.220 Sum_probs=148.1
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-----CCCCCCCChHHHH
Q 020274 166 AKWRPLQTLTLSMQIRYMDMLLDG-GLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANP-----HVKDGDGATPLHY 239 (328)
Q Consensus 166 ~g~t~L~~A~~~g~~~~v~~Ll~~-gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~-----~~~d~~g~tpLh~ 239 (328)
.|+||||+|+..|+.+++++|++. |++++.++..|+||||+|+..|+.+++++|+++|+++ +.++..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 488999999999999999999997 9999999999999999999999999999999999887 6778899999999
Q ss_pred HHHcCCHHHHHHHHhCCCCccccCC-------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 020274 240 AVQVGAMQSVKLLIKYNVDVNVADN-------------EGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMS 306 (328)
Q Consensus 240 A~~~g~~~iv~~Ll~~ga~in~~d~-------------~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 306 (328)
|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999998866 799999999999999999999999999999999999999999
Q ss_pred HHcCCCCChHHHHHHHhhCC
Q 020274 307 LCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 307 ~~~g~~~~~~~i~~lL~~~~ 326 (328)
+..|+.....+++++|....
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g 181 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYD 181 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTT
T ss_pred HHcCChHHHHHHHHHHHhcC
Confidence 99999222223338887654
No 49
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=3.6e-32 Score=229.16 Aligned_cols=157 Identities=27% Similarity=0.304 Sum_probs=108.0
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcC
Q 020274 166 AKWRPLQTLTLSMQIRYMDMLLDG-GLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVG 244 (328)
Q Consensus 166 ~g~t~L~~A~~~g~~~~v~~Ll~~-gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 244 (328)
.+.++||.|+..|+.+++++|++. +.+++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 455667777777777777777765 4556666667777777777777777777777777777777777777777777777
Q ss_pred CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 245 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 245 ~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++ .+++++|..
T Consensus 84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~----~~~~~~L~~ 159 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLR----ELLRERAEK 159 (179)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHH----HHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHH----HHHHHHHHH
Confidence 7777777777777777777777777777777777777777777777777777777777777766665 666666665
Q ss_pred CC
Q 020274 325 LP 326 (328)
Q Consensus 325 ~~ 326 (328)
..
T Consensus 160 ~g 161 (179)
T 3f6q_A 160 MG 161 (179)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 50
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=2.7e-32 Score=226.61 Aligned_cols=158 Identities=32% Similarity=0.420 Sum_probs=148.8
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHH-CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q 020274 164 STAKWRPLQTLTLSMQIRYMDMLLD-GGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQ 242 (328)
Q Consensus 164 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~ 242 (328)
+..+.||||.|+..|+.++++.|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 5678899999999999999999998 567788888899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHH
Q 020274 243 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 322 (328)
Q Consensus 243 ~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL 322 (328)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. |+ .+|+++|
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~----~~i~~~L 159 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GD----TDIQDLL 159 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TC----HHHHHHH
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CC----hHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999877 66 7999999
Q ss_pred hhCC
Q 020274 323 KILP 326 (328)
Q Consensus 323 ~~~~ 326 (328)
....
T Consensus 160 ~~~g 163 (165)
T 3twr_A 160 RGDA 163 (165)
T ss_dssp HTC-
T ss_pred hhcc
Confidence 8754
No 51
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-31 Score=242.80 Aligned_cols=184 Identities=25% Similarity=0.326 Sum_probs=164.3
Q ss_pred HHHhhChHHHHHHHhcCCCCCCC-------CCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 020274 139 EVEQLLEPEEREILNQNATPNLG-------KISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 139 ai~~~~~~~v~~lL~~g~~~~~~-------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g 211 (328)
+++++..+.++.++......... ..+..+.||||.|+..|+.++|++|++.|++++.++..|.||||+|+..|
T Consensus 5 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 84 (299)
T 1s70_B 5 DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDD 84 (299)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 45666667777777765543321 12346789999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCC---------------------------
Q 020274 212 KEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADN--------------------------- 264 (328)
Q Consensus 212 ~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~--------------------------- 264 (328)
+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~ 164 (299)
T 1s70_B 85 NVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGV 164 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999876553
Q ss_pred ---------------------------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 020274 265 ---------------------------------EGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGR 311 (328)
Q Consensus 265 ---------------------------------~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~ 311 (328)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~ 244 (299)
T 1s70_B 165 DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK 244 (299)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCC
Confidence 47788999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhhCC
Q 020274 312 DFKSYDLAKLLKILP 326 (328)
Q Consensus 312 ~~~~~~i~~lL~~~~ 326 (328)
.+++++|....
T Consensus 245 ----~~~v~~Ll~~g 255 (299)
T 1s70_B 245 ----EEACRILVENL 255 (299)
T ss_dssp ----HHHHHHHHHTT
T ss_pred ----HHHHHHHHHcC
Confidence 99999998764
No 52
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.98 E-value=1.1e-31 Score=220.56 Aligned_cols=153 Identities=29% Similarity=0.452 Sum_probs=146.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC
Q 020274 167 KWRPLQTLTLSMQIRYMDMLLDG-GLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGA 245 (328)
Q Consensus 167 g~t~L~~A~~~g~~~~v~~Ll~~-gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 245 (328)
+.||||.|+..|+.++++.|++. +.+++.++..|.||||+ +..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 45899999999999999999998 45899999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 246 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 246 ~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+..|+ .+++++|...
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~----~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGA----QDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCC----HHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCc----HHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999 9999999999999999999999 9999998753
No 53
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.98 E-value=4.6e-31 Score=230.67 Aligned_cols=187 Identities=24% Similarity=0.285 Sum_probs=174.4
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCC-CCCcHHHHHHHcCC
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDK-DGLTALHKAIIGKK 212 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~-~g~t~L~~A~~~g~ 212 (328)
..++.|+..+..+.++.+++.|.+++. .+..|.||||+|+..|+.+++++|++.|++++.... .|.||||+|+..|+
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAGYDVRQ--PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred hHHHHHHHcCChHHHHHHHHcCCCcCC--CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 348899999999999999999987654 477899999999999999999999999999886654 49999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCC
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN-RDIAKVLLINGAD 291 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~-~~iv~~Ll~~gad 291 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ .+++++|+++|++
T Consensus 89 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~ 168 (240)
T 3eu9_A 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS 168 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999997776 8999999999999
Q ss_pred CCCCCC-CCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 292 KSRKTK-DGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 292 ~~~~d~-~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
++..+. .|.||||+|+.+|+ .+++++|....
T Consensus 169 ~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g 200 (240)
T 3eu9_A 169 VNLGDKYHKNTALHWAVLAGN----TTVISLLLEAG 200 (240)
T ss_dssp TTCCCTTTCCCHHHHHHHHTC----HHHHHHHHHHT
T ss_pred cchhhccCCCcHHHHHHHcCC----HHHHHHHHHcC
Confidence 999997 89999999999999 99999987653
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=8.7e-32 Score=225.02 Aligned_cols=167 Identities=21% Similarity=0.265 Sum_probs=153.1
Q ss_pred HHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHH
Q 020274 135 DLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEA 214 (328)
Q Consensus 135 ~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~ 214 (328)
.++.|+..++.+.++.+++.+... ....+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 5 SIHQLAAQGELDQLKEHLRKGDNL-VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp CHHHHHHTTCHHHHHHHHTTCSGG-GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hHHHHHHcCCHHHHHHHHHcCccc-ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 478999999999999999987652 3445789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 020274 215 VISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSR 294 (328)
Q Consensus 215 ~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~ 294 (328)
++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++..
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 84 IVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcH
Q 020274 295 KTKDGKTA 302 (328)
Q Consensus 295 ~d~~G~Tp 302 (328)
++..|.||
T Consensus 164 ~~~~~~~p 171 (172)
T 3v30_A 164 SNLVPADP 171 (172)
T ss_dssp C-------
T ss_pred ccCCCCCC
Confidence 99999887
No 55
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.98 E-value=1.2e-31 Score=243.21 Aligned_cols=175 Identities=21% Similarity=0.205 Sum_probs=160.5
Q ss_pred HHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHH
Q 020274 140 VEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHL 219 (328)
Q Consensus 140 i~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~L 219 (328)
+.......++++|..+ + ++..+..|+||||+|+..|+.+++++|+++|++++.++ |.||||+|+..|+.+++++|
T Consensus 7 i~~~~~~~v~~lL~~~-~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK-D--TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp GGGCCHHHHHHHHHST-T--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHH
T ss_pred HHhcCHHHHHHHHHhC-C--CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHH
Confidence 4456677888888765 3 45568899999999999999999999999999999884 89999999999999999999
Q ss_pred HHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 020274 220 LRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEG-WTPLHIAIQSRNRDIAKVLLINGADKSRKTKD 298 (328)
Q Consensus 220 l~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g-~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~ 298 (328)
+++|++++.++..|+||||+|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|+++... ..
T Consensus 82 l~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~ 160 (285)
T 3kea_A 82 LFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AI 160 (285)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-ST
T ss_pred HHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cC
Confidence 99999999999999999999999999999999999999999999999 79999999999999999999999987333 28
Q ss_pred CCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 299 GKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 299 G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
|.||||+|+.+|+ .+++++|..
T Consensus 161 g~t~L~~A~~~g~----~~~v~~Ll~ 182 (285)
T 3kea_A 161 LLSCIHITIKNGH----VDMMILLLD 182 (285)
T ss_dssp HHHHHHHHHHTTC----HHHHHHHHH
T ss_pred CccHHHHHHHcCh----HHHHHHHHH
Confidence 9999999999999 999999875
No 56
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=9.9e-32 Score=252.75 Aligned_cols=191 Identities=23% Similarity=0.266 Sum_probs=174.0
Q ss_pred cccHHHHHHHHhhChHHHHHHH--------hcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCc
Q 020274 131 KYEEDLLKEVEQLLEPEEREIL--------NQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLT 202 (328)
Q Consensus 131 ~~~~~l~~ai~~~~~~~v~~lL--------~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t 202 (328)
.....|+.|+..+..+.++.++ +.|.+++.. +..|+||||+|+..|+.++|++|+++|++++.++..|.|
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~--d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t 201 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM--DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS 201 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC--CCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCC
Confidence 3446788888888876555554 788877654 788999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCChHHHHHHHcC---CHHHHHHHHhCCCCccc--------cCCCCCc
Q 020274 203 ALHKAIIGKKEAVISHLLRKG---ANPHVKDGDGATPLHYAVQVG---AMQSVKLLIKYNVDVNV--------ADNEGWT 268 (328)
Q Consensus 203 ~L~~A~~~g~~~~v~~Ll~~g---~d~~~~d~~g~tpLh~A~~~g---~~~iv~~Ll~~ga~in~--------~d~~g~T 268 (328)
|||+|+..|+.+++++|+++| ++++.++..|.||||+|+..+ +.+++++|+++|++++. .+..|.|
T Consensus 202 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 202 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp HHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCC
T ss_pred HHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCC
Confidence 999999999999999999998 899999999999999999998 89999999999999986 5778999
Q ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 269 PLHIAIQSRNRDIAKVLLING-ADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 269 pL~~A~~~g~~~iv~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
|||+|+..|+.++|++|+++| ++++.+|..|.||||+|+.+|+ .+++++|.....
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~----~~iv~~Ll~~ga 337 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGR----IEVVMYLIQQGA 337 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTC----HHHHHHHHHTTC
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 999999999999999999886 9999999999999999999999 999999987643
No 57
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=4.5e-31 Score=218.16 Aligned_cols=158 Identities=22% Similarity=0.293 Sum_probs=148.7
Q ss_pred cccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHc
Q 020274 131 KYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIG 210 (328)
Q Consensus 131 ~~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~ 210 (328)
.+...++.|+..+..+.++.+++.|.+++. .+..|+||||+|+. |+.+++++|+++|++++.++..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNA--QNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTC--CCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccc--cCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 456789999999999999999999887754 47889999999999 999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 020274 211 KKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVD-VNVADNEGWTPLHIAIQSRNRDIAKVLLING 289 (328)
Q Consensus 211 g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~-in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 289 (328)
|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999998 6999999999999999999999999999999
Q ss_pred CC
Q 020274 290 AD 291 (328)
Q Consensus 290 ad 291 (328)
||
T Consensus 161 Ad 162 (162)
T 1ihb_A 161 AG 162 (162)
T ss_dssp --
T ss_pred CC
Confidence 86
No 58
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.6e-32 Score=252.31 Aligned_cols=172 Identities=23% Similarity=0.223 Sum_probs=152.3
Q ss_pred HHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC---HH
Q 020274 138 KEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK---EA 214 (328)
Q Consensus 138 ~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~---~~ 214 (328)
.++..+..+.++.+++.|.+++.. .+..|+||||+|+..|+.++|++|+++|++++.++..|+||||+|+..|+ .+
T Consensus 103 ~a~~~~~~~~~~~l~~~g~dvn~~-~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 103 VSFDSLLQEVNDAFPNTQLNLNIP-VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp -CHHHHHHHHHHHCTTSCCCSCSC-CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTT
T ss_pred HHHHhhHHHHHHHHHhcCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHH
Confidence 345556666777778888887762 37889999999999999999999999999999999999999999999998 68
Q ss_pred HHHHHHHCC-CCCCCCCCCCChHHHHHHH----cCCHHHHHHHHhCCC--------------------------------
Q 020274 215 VISHLLRKG-ANPHVKDGDGATPLHYAVQ----VGAMQSVKLLIKYNV-------------------------------- 257 (328)
Q Consensus 215 ~v~~Ll~~g-~d~~~~d~~g~tpLh~A~~----~g~~~iv~~Ll~~ga-------------------------------- 257 (328)
+++.|++.+ ++++.++..|+||||+|+. .|+.+++++|++.++
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~ 261 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 261 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CH
T ss_pred HHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCCh
Confidence 888888886 7799999999999999999 899999999998743
Q ss_pred -------------CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 020274 258 -------------DVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYG 310 (328)
Q Consensus 258 -------------~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g 310 (328)
+++.+|..|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+.+|
T Consensus 262 L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 262 ILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred hHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 57888899999999999999999999999999999999999999999998765
No 59
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=5e-30 Score=237.02 Aligned_cols=186 Identities=23% Similarity=0.290 Sum_probs=169.2
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCC--------CCCCCCcHHHHHHHhCCHHHHHHHHH-CCCCCCccCCCCCcH
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGK--------ISTAKWRPLQTLTLSMQIRYMDMLLD-GGLDIDSVDKDGLTA 203 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~--------~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gadi~~~d~~g~t~ 203 (328)
...++.++..+..+.++.+++.|.+++... .+..|.||||+|+..|+.++|++||+ .|++++.++..|.|+
T Consensus 126 ~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~ 205 (337)
T 4g8k_A 126 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 205 (337)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcH
Confidence 346889999999999999999999887543 34578999999999999999999996 799999999999999
Q ss_pred HHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCCcHHHHHHHcCC
Q 020274 204 LHKAIIGKK----EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKY-NVDVNVADNEGWTPLHIAIQSRN 278 (328)
Q Consensus 204 L~~A~~~g~----~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~-ga~in~~d~~g~TpL~~A~~~g~ 278 (328)
|+.++..+. ..++++|+++|++++.++..|+||||+|+..|+.+++++|+.. |++++.+|..|+||||+|+..|+
T Consensus 206 l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~ 285 (337)
T 4g8k_A 206 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 285 (337)
T ss_dssp HHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCC
Confidence 999886543 4688999999999999999999999999999999999999986 89999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 279 RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 279 ~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
.++|++||++||+++.+ ||||+|+.+|+ .+|+++|.....
T Consensus 286 ~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~----~~iv~~Ll~~GA 325 (337)
T 4g8k_A 286 KKIAELLCKRGASTDCG-----DLVMTARRNYD----HSLVKVLLSHGA 325 (337)
T ss_dssp HHHHHHHHTTSCSSTTC-----CHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCCCCC-----CHHHHHHHcCC----HHHHHHHHHCcC
Confidence 99999999999999764 59999999999 999999987653
No 60
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.4e-31 Score=235.01 Aligned_cols=160 Identities=24% Similarity=0.301 Sum_probs=147.8
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHCCC----CCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHH
Q 020274 163 ISTAKWRPLQTLTLSMQIRYMDMLLDGGL----DIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLH 238 (328)
Q Consensus 163 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----di~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh 238 (328)
.+..|+||||+|+..|+.+++++|++.+. +++.++..|.||||+|+..|+.+++++|+++|++++.++..|+||||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH 83 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 47889999999999999999999998765 79999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCC------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCC
Q 020274 239 YAVQVGAMQSVKLLIKYNVD------VNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTK-DGKTALDMSLCYGR 311 (328)
Q Consensus 239 ~A~~~g~~~iv~~Ll~~ga~------in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~-~G~TpL~~A~~~g~ 311 (328)
+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~ 163 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN 163 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 99999999999999999876 577888999999999999999999999999999999998 99999999999999
Q ss_pred CCChHHHHHHHhhCC
Q 020274 312 DFKSYDLAKLLKILP 326 (328)
Q Consensus 312 ~~~~~~i~~lL~~~~ 326 (328)
.+++++|....
T Consensus 164 ----~~~v~~Ll~~g 174 (236)
T 1ikn_D 164 ----PDLVSLLLKCG 174 (236)
T ss_dssp ----HHHHHHHHTTT
T ss_pred ----HHHHHHHHHcC
Confidence 99999998764
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=6.2e-30 Score=213.58 Aligned_cols=156 Identities=29% Similarity=0.484 Sum_probs=148.8
Q ss_pred ccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 020274 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 132 ~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g 211 (328)
....++.|+..|..+.++.+++.|.+++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNA--EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 34679999999999999999999988765 4788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 020274 212 KEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING 289 (328)
Q Consensus 212 ~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 289 (328)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999876
No 62
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=3e-30 Score=217.35 Aligned_cols=166 Identities=19% Similarity=0.231 Sum_probs=155.4
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..++.+.++.+++.+.. ++...+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTEN-DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcc-cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 3468999999999999999998533 234458899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADK 292 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 292 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..++.+++++|+++|+++
T Consensus 85 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 85 RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 020274 293 SRKTKDG 299 (328)
Q Consensus 293 ~~~d~~G 299 (328)
+..+..+
T Consensus 165 ~~~~~~~ 171 (179)
T 3f6q_A 165 NRIPYKD 171 (179)
T ss_dssp SCBCCCC
T ss_pred ccCCccc
Confidence 9887665
No 63
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=9.4e-31 Score=244.43 Aligned_cols=163 Identities=21% Similarity=0.231 Sum_probs=134.0
Q ss_pred CCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-----------
Q 020274 160 LGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHV----------- 228 (328)
Q Consensus 160 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~----------- 228 (328)
....+..|+||||+|+..|+.++|++|++.|++++.++..|.||||+|+..|+.++|++|+++|++++.
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~ 92 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAV 92 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHH
Confidence 344578899999999999999999999999999999999999999999999999999999999987765
Q ss_pred -----------------------------------------CCCCCChHHHHHHHcC--CHHHHHHHHhCCCCccccCCC
Q 020274 229 -----------------------------------------KDGDGATPLHYAVQVG--AMQSVKLLIKYNVDVNVADNE 265 (328)
Q Consensus 229 -----------------------------------------~d~~g~tpLh~A~~~g--~~~iv~~Ll~~ga~in~~d~~ 265 (328)
++..|.||||+|+..| +.+++++|+++|++++.+|..
T Consensus 93 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~ 172 (364)
T 3ljn_A 93 MANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKA 172 (364)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTT
T ss_pred HcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCC
Confidence 4556777777777777 777777777777777777777
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 266 GWTPLHIAIQSRNRDIAKVLLINGAD-----KSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 266 g~TpL~~A~~~g~~~iv~~Ll~~gad-----~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+.+|+ .+++++|....
T Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g 234 (364)
T 3ljn_A 173 DETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW----EDVAMRFVEMG 234 (364)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC----HHHHHHHHTTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC----HHHHHHHHHcC
Confidence 77777777777777777777777777 77777777777777777777 77777776543
No 64
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.1e-29 Score=208.54 Aligned_cols=150 Identities=27% Similarity=0.335 Sum_probs=144.6
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..+..+.++.+++.|.+.+ .+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 467899999999999999999998765 37789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVL 285 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~L 285 (328)
.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.2e-29 Score=216.74 Aligned_cols=163 Identities=22% Similarity=0.243 Sum_probs=151.4
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHCCC-CCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q 020274 164 STAKWRPLQTLTLSMQIRYMDMLLDGGL-DIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQ 242 (328)
Q Consensus 164 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-di~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~ 242 (328)
...+.||||.|+..|+.++++.|+..+. +++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3568899999999999999999998776 999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHH-hCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCCC-ChHHHH
Q 020274 243 VGAMQSVKLLI-KYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING-ADKSRKTKDGKTALDMSLCYGRDF-KSYDLA 319 (328)
Q Consensus 243 ~g~~~iv~~Ll-~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~-~~~~i~ 319 (328)
.|+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..++.. ...+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 99999999999 668899999999999999999999999999999999 999999999999999999988622 237899
Q ss_pred HHHhhCC
Q 020274 320 KLLKILP 326 (328)
Q Consensus 320 ~lL~~~~ 326 (328)
++|....
T Consensus 162 ~~Ll~~g 168 (201)
T 3hra_A 162 KLLMENG 168 (201)
T ss_dssp HHHHHTT
T ss_pred HHHHHCC
Confidence 9987754
No 66
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=5.6e-31 Score=217.20 Aligned_cols=145 Identities=21% Similarity=0.266 Sum_probs=121.8
Q ss_pred CCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCh-HHHH
Q 020274 161 GKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGAT-PLHY 239 (328)
Q Consensus 161 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~t-pLh~ 239 (328)
...+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+ .|+.+++++|+++|++++.++..|+| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 344678999999999999999999999999999999999999999985 99999999999999999999999999 9999
Q ss_pred HHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 020274 240 AVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMS 306 (328)
Q Consensus 240 A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 306 (328)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||.+-+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999998844
No 67
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=9.6e-30 Score=211.55 Aligned_cols=158 Identities=22% Similarity=0.243 Sum_probs=149.9
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKE 213 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~ 213 (328)
..++.|+..|..+.++.+++.+.+++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 5 t~L~~A~~~g~~~~v~~ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 5 LSVHQLAAQGEMLYLATRIEQENVINH--TDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp CCHHHHHHTTCHHHHHHHHHHSSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred chHHHHHHCCCHHHHHHHHHcCCCcCC--CCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 357899999999999999999877554 478999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 020274 214 AVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKS 293 (328)
Q Consensus 214 ~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 293 (328)
+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++++++.
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 83 DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887653
No 68
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.9e-30 Score=230.66 Aligned_cols=154 Identities=22% Similarity=0.218 Sum_probs=142.5
Q ss_pred CCcHHHHHHHhCCHH----HHHHHHHCCCCCCc----cCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCC------
Q 020274 167 KWRPLQTLTLSMQIR----YMDMLLDGGLDIDS----VDKDGLTALHKAIIG---KKEAVISHLLRKGANPHVK------ 229 (328)
Q Consensus 167 g~t~L~~A~~~g~~~----~v~~Ll~~gadi~~----~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~d~~~~------ 229 (328)
|+||||.|+..|+.+ ++++|++.|++++. ++..|+||||+|+.. |+.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 789999999999997 66778889999998 899999999999999 9999999999999887633
Q ss_pred -----CCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCC-------------CCcHHHHHHHcCCHHHHHHHHH---c
Q 020274 230 -----DGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNE-------------GWTPLHIAIQSRNRDIAKVLLI---N 288 (328)
Q Consensus 230 -----d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~-------------g~TpL~~A~~~g~~~iv~~Ll~---~ 288 (328)
|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++ +
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 368999999999999999999999999999999886 9999999999999999999999 9
Q ss_pred CCCCCCCCCCCCcHHHHHHH--cCCCCChHH-------HHHHHhh
Q 020274 289 GADKSRKTKDGKTALDMSLC--YGRDFKSYD-------LAKLLKI 324 (328)
Q Consensus 289 gad~~~~d~~G~TpL~~A~~--~g~~~~~~~-------i~~lL~~ 324 (328)
|++++.+|..|+||||+|+. .++ .+ ++++|..
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~----~~~~~~~~~iv~~Ll~ 202 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNS----PENSALVIHMYDGLLQ 202 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSC----HHHHHHHHHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCC----chhhHHHHHHHHHHHH
Confidence 99999999999999999999 555 66 8888865
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=8e-30 Score=211.60 Aligned_cols=157 Identities=26% Similarity=0.311 Sum_probs=146.0
Q ss_pred ccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 020274 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGK 211 (328)
Q Consensus 132 ~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g 211 (328)
....++.|+..++.+.++.+++.+. .+....+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTT-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCC-CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcC
Confidence 3467999999999999999998643 445556788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 020274 212 KEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGA 290 (328)
Q Consensus 212 ~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 290 (328)
+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. |+.+++++|+++||
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 87 HYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred cHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999877 99999999999986
No 70
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1.2e-30 Score=230.38 Aligned_cols=155 Identities=25% Similarity=0.319 Sum_probs=106.6
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcC
Q 020274 165 TAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVG 244 (328)
Q Consensus 165 ~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 244 (328)
..|.||||.|+..++.++++.|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 45889999999999999999999999888854 66889999999999999999999999999988889999999999999
Q ss_pred CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-cHHHHH--HHcCCCCChHHHHHH
Q 020274 245 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGK-TALDMS--LCYGRDFKSYDLAKL 321 (328)
Q Consensus 245 ~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~-TpL~~A--~~~g~~~~~~~i~~l 321 (328)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+ .+++++
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~----~~~~~~ 157 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGY----TQCSQF 157 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTC----CCHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhcc----HHHHHH
Confidence 99999999999999999998999999999999999999999999999998888777 999988 67777 677777
Q ss_pred Hhh
Q 020274 322 LKI 324 (328)
Q Consensus 322 L~~ 324 (328)
|..
T Consensus 158 Ll~ 160 (239)
T 1ycs_B 158 LYG 160 (239)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=4.6e-29 Score=204.94 Aligned_cols=153 Identities=25% Similarity=0.309 Sum_probs=145.1
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..++.+.++.+++. ...+....+..|+||||+ +..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 4578999999999999999998 544555668899999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLIN 288 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 288 (328)
.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999 99999999999999999999999999999975
No 72
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=6.2e-30 Score=206.06 Aligned_cols=133 Identities=24% Similarity=0.365 Sum_probs=112.4
Q ss_pred CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CChH
Q 020274 158 PNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGD-GATP 236 (328)
Q Consensus 158 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~-g~tp 236 (328)
++++..+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+. |+.+++++|+++|++++.++.. |+||
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 3445557788888888888888888888888888888888888888888888 8888888888888888888888 8888
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 020274 237 LHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 291 (328)
Q Consensus 237 Lh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 291 (328)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8888888888888888888888888888888888888888888888888888875
No 73
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=3.1e-29 Score=213.36 Aligned_cols=155 Identities=21% Similarity=0.192 Sum_probs=148.2
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..+..+.++.+++.+.+++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 113 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKLED--KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGY 113 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcccccc--ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 3568999999999999999999987665 47789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 020274 213 EAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING 289 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 289 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 114 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 114 SEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875
No 74
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=2e-30 Score=221.00 Aligned_cols=152 Identities=15% Similarity=0.152 Sum_probs=125.4
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHCCCCCCccC-CCCCcHHHHHHHcCCH----HHHHHHHHCCCCCCCCCCCCChHHHHHH
Q 020274 167 KWRPLQTLTLSMQIRYMDMLLDGGLDIDSVD-KDGLTALHKAIIGKKE----AVISHLLRKGANPHVKDGDGATPLHYAV 241 (328)
Q Consensus 167 g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d-~~g~t~L~~A~~~g~~----~~v~~Ll~~g~d~~~~d~~g~tpLh~A~ 241 (328)
++++|+.|+..|+.+.++.++..+. +.++ ..|+||||+|+..++. +++++|+++|++++.++..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4678888888888888888887664 4444 6688899998888875 4888888889998888888899999888
Q ss_pred HcCC------HHHHHHHHhCCCCccccCCCCC-cHHHHHHHcC-----CHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHH
Q 020274 242 QVGA------MQSVKLLIKYNVDVNVADNEGW-TPLHIAIQSR-----NRDIAKVLLI-NGADKSRKTKDGKTALDMSLC 308 (328)
Q Consensus 242 ~~g~------~~iv~~Ll~~ga~in~~d~~g~-TpL~~A~~~g-----~~~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~ 308 (328)
..++ .+++++|+++|+++|.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|+||||+|+.
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 8876 5788889999999998888888 8999888844 3568888888 899999999999999999988
Q ss_pred cCCCCChHHHHHHHhh
Q 020274 309 YGRDFKSYDLAKLLKI 324 (328)
Q Consensus 309 ~g~~~~~~~i~~lL~~ 324 (328)
.|+ .+++++|..
T Consensus 164 ~~~----~~~v~~L~~ 175 (186)
T 3t8k_A 164 CQK----PIALKMMED 175 (186)
T ss_dssp TTC----HHHHHHHHH
T ss_pred cCC----HHHHHHHHH
Confidence 888 777777764
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.1e-30 Score=230.56 Aligned_cols=175 Identities=17% Similarity=0.198 Sum_probs=138.5
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKE 213 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~ 213 (328)
..|+.++..+..+.++.+++.|.+++. +..+.||||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.
T Consensus 7 t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 83 (239)
T 1ycs_B 7 VSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHT 83 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCH
T ss_pred ccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 457788889999999999999999886 46789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCC-cHHHHH--HHcCCHHHHHHHHHcCC
Q 020274 214 AVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGW-TPLHIA--IQSRNRDIAKVLLINGA 290 (328)
Q Consensus 214 ~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~-TpL~~A--~~~g~~~iv~~Ll~~ga 290 (328)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|. ||||+| +..|+.+++++|+++|+
T Consensus 84 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 84 EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 163 (239)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999998877 999999 78899999999999999
Q ss_pred CCCCC---------CCCCCcHHHHHHHcCC
Q 020274 291 DKSRK---------TKDGKTALDMSLCYGR 311 (328)
Q Consensus 291 d~~~~---------d~~G~TpL~~A~~~g~ 311 (328)
+++.. +..+.+|+++++..|.
T Consensus 164 ~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 164 KMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cccccccceEEEEeccCCCCCCcccccCCC
Confidence 98876 6678899998888775
No 76
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.9e-29 Score=225.20 Aligned_cols=172 Identities=17% Similarity=0.211 Sum_probs=145.1
Q ss_pred cHHHHHHHHh---hChHHHHHHHhcCCCC---------CCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCC--
Q 020274 133 EEDLLKEVEQ---LLEPEEREILNQNATP---------NLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDK-- 198 (328)
Q Consensus 133 ~~~l~~ai~~---~~~~~v~~lL~~g~~~---------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~-- 198 (328)
...|+.|+.. +..+.++.|++.|.++ .....+..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~ 134 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD 134 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSG
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccc
Confidence 4567888875 9999999999988543 2333467899999999999999999999999999999987
Q ss_pred ------------CCCcHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCChHHHHHHHcCC---------HHHHHHHHh
Q 020274 199 ------------DGLTALHKAIIGKKEAVISHLLR---KGANPHVKDGDGATPLHYAVQVGA---------MQSVKLLIK 254 (328)
Q Consensus 199 ------------~g~t~L~~A~~~g~~~~v~~Ll~---~g~d~~~~d~~g~tpLh~A~~~g~---------~~iv~~Ll~ 254 (328)
.|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++++|++
T Consensus 135 ~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~ 214 (273)
T 2pnn_A 135 FFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI 214 (273)
T ss_dssp GGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH
Confidence 79999999999999999999999 999999999999999999999998 899999999
Q ss_pred CCCCcc-------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCcHHH
Q 020274 255 YNVDVN-------VADNEGWTPLHIAIQSRNRDIAKVLLINGA-DKSRKTKDGKTALD 304 (328)
Q Consensus 255 ~ga~in-------~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga-d~~~~d~~G~TpL~ 304 (328)
+|++++ .+|..|.||||+|+..|+.+++++|+++|| |+......+.+|-+
T Consensus 215 ~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 215 LGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred hhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 999996 589999999999999999999999999999 89888887777644
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=229.43 Aligned_cols=164 Identities=21% Similarity=0.259 Sum_probs=131.4
Q ss_pred HHHHHhcCCCCCCC-CCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q 020274 148 EREILNQNATPNLG-KISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANP 226 (328)
Q Consensus 148 v~~lL~~g~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~ 226 (328)
++.+|+++.+++.. ..+..+.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 35677777777643 34566788899999999999999999989999888888999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCCcHHHHH--HHcCCHHHHHHHHHcCCCC-----------
Q 020274 227 HVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVAD-NEGWTPLHIA--IQSRNRDIAKVLLINGADK----------- 292 (328)
Q Consensus 227 ~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d-~~g~TpL~~A--~~~g~~~iv~~Ll~~gad~----------- 292 (328)
+.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.||||+| +..|+.+++++|+++|+++
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l 160 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL 160 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence 8888889999999999999999999999999998886 5889999998 8888899999998876654
Q ss_pred ---------------------CCCCCCCCcHHHHHHHcCC
Q 020274 293 ---------------------SRKTKDGKTALDMSLCYGR 311 (328)
Q Consensus 293 ---------------------~~~d~~G~TpL~~A~~~g~ 311 (328)
+.+|..|+||||+|+.+|+
T Consensus 161 ~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 161 WDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp SCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTE
T ss_pred HHHhhccccccCccccccccccccCCCcccHHHHHHHcCC
Confidence 3456678888888888887
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=4.2e-29 Score=201.19 Aligned_cols=132 Identities=23% Similarity=0.268 Sum_probs=127.9
Q ss_pred CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCC-CCc
Q 020274 190 GLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNE-GWT 268 (328)
Q Consensus 190 gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~-g~T 268 (328)
+++++.++..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+. |+.+++++|+++|++++.++.. |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 269 PLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 269 pL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+ .+++++|....
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~----~~~~~~Ll~~G 134 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGH----RDIARYLHAAT 134 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTC----HHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999998 99999997653
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=5.8e-32 Score=237.87 Aligned_cols=152 Identities=18% Similarity=0.148 Sum_probs=138.7
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKK 212 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~ 212 (328)
...++.|+..+..+.++.+++.|.+++. .+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMNDPSQ--PNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 3568999999999999999999988765 47889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCC-CCCChHHHHH--HHcCCHHHHHHHHhCCCC-------------------------------
Q 020274 213 EAVISHLLRKGANPHVKD-GDGATPLHYA--VQVGAMQSVKLLIKYNVD------------------------------- 258 (328)
Q Consensus 213 ~~~v~~Ll~~g~d~~~~d-~~g~tpLh~A--~~~g~~~iv~~Ll~~ga~------------------------------- 258 (328)
.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|+++|++
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~ 179 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESV 179 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEE
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccc
Confidence 999999999999999986 6999999999 999999999999986543
Q ss_pred -ccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 020274 259 -VNVADNEGWTPLHIAIQSRNRDIAKVLL 286 (328)
Q Consensus 259 -in~~d~~g~TpL~~A~~~g~~~iv~~Ll 286 (328)
++.+|..|+||||+|+..|+.++|+.++
T Consensus 180 ~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 180 TVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp EEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred cccccCCCcccHHHHHHHcCCcceeehhh
Confidence 3456778999999999999999887654
No 80
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=5.3e-28 Score=190.51 Aligned_cols=126 Identities=37% Similarity=0.570 Sum_probs=118.7
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC
Q 020274 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGA 245 (328)
Q Consensus 166 ~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 245 (328)
+|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 020274 246 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 291 (328)
Q Consensus 246 ~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 291 (328)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|||
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999986
No 81
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1.2e-28 Score=219.15 Aligned_cols=162 Identities=17% Similarity=0.208 Sum_probs=147.1
Q ss_pred cHHHHHHH---HhhChHHHHHHHhcCCC---------CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccC---
Q 020274 133 EEDLLKEV---EQLLEPEEREILNQNAT---------PNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVD--- 197 (328)
Q Consensus 133 ~~~l~~ai---~~~~~~~v~~lL~~g~~---------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d--- 197 (328)
...|+.|+ ..+..+.++.|++.|.+ .+....+..|+||||+|+..|+.++|++|+++|++++.++
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~ 126 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc
Confidence 34677777 67899999999998754 3445556689999999999999999999999999999998
Q ss_pred -----------CCCCcHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCChHHHHHHHcCC---------HHHHHHHHh
Q 020274 198 -----------KDGLTALHKAIIGKKEAVISHLLR---KGANPHVKDGDGATPLHYAVQVGA---------MQSVKLLIK 254 (328)
Q Consensus 198 -----------~~g~t~L~~A~~~g~~~~v~~Ll~---~g~d~~~~d~~g~tpLh~A~~~g~---------~~iv~~Ll~ 254 (328)
..|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ .+++++|++
T Consensus 127 ~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~ 206 (260)
T 3jxi_A 127 FFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI 206 (260)
T ss_dssp CCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH
Confidence 689999999999999999999999 999999999999999999999888 799999999
Q ss_pred CCCCc-------cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 020274 255 YNVDV-------NVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSR 294 (328)
Q Consensus 255 ~ga~i-------n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~ 294 (328)
+|+++ +.+|..|.||||+|+..|+.+++++|+++|+++..
T Consensus 207 ~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 207 KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred hCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 99999 77999999999999999999999999999987543
No 82
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=7.4e-28 Score=193.84 Aligned_cols=126 Identities=29% Similarity=0.393 Sum_probs=101.1
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHc
Q 020274 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQV 243 (328)
Q Consensus 164 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 243 (328)
...+.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34567888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 020274 244 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING 289 (328)
Q Consensus 244 g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 289 (328)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8888888888888888888888888888888888888888887765
No 83
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=7.9e-29 Score=228.95 Aligned_cols=181 Identities=19% Similarity=0.178 Sum_probs=153.6
Q ss_pred hChHHHHHHHhcCCCCCCCCC---------------CCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCc-cCCCCCcHHHH
Q 020274 143 LLEPEEREILNQNATPNLGKI---------------STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDS-VDKDGLTALHK 206 (328)
Q Consensus 143 ~~~~~v~~lL~~g~~~~~~~~---------------~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~-~d~~g~t~L~~ 206 (328)
|..+.++.+|++|.+++.... .....+.+|+|+..+..+++++|++.|+++|. ++..|+||||+
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~ 137 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHH
Confidence 788899999999988765211 11122345888988999999999999999999 89999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC---HHHHHHHHhCC-CCccccCCCCCcHHHHHHH----cCC
Q 020274 207 AIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGA---MQSVKLLIKYN-VDVNVADNEGWTPLHIAIQ----SRN 278 (328)
Q Consensus 207 A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~---~~iv~~Ll~~g-a~in~~d~~g~TpL~~A~~----~g~ 278 (328)
|+..|+.++|++|+++|++++.++..|+||||+|+..|+ .++++.|++++ ++++.+|..|+||||+|+. .|+
T Consensus 138 Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~ 217 (327)
T 1sw6_A 138 LTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC 217 (327)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHcccccc
Confidence 999999999999999999999999999999999999998 78888888886 7899999999999999999 899
Q ss_pred HHHHHHHHHcCC---------------------------------------------CCCCCCCCCCcHHHHHHHcCCCC
Q 020274 279 RDIAKVLLINGA---------------------------------------------DKSRKTKDGKTALDMSLCYGRDF 313 (328)
Q Consensus 279 ~~iv~~Ll~~ga---------------------------------------------d~~~~d~~G~TpL~~A~~~g~~~ 313 (328)
.+++++|++.++ +++.+|..|+||||+|+.+|+
T Consensus 218 ~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~-- 295 (327)
T 1sw6_A 218 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN-- 295 (327)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCC--
Confidence 999999998743 688899999999999999999
Q ss_pred ChHHHHHHHhhCCC
Q 020274 314 KSYDLAKLLKILPV 327 (328)
Q Consensus 314 ~~~~i~~lL~~~~~ 327 (328)
.+++++|.....
T Consensus 296 --~~~v~~Ll~~Ga 307 (327)
T 1sw6_A 296 --ISIVDALLDYGA 307 (327)
T ss_dssp --HHHHHHHHHTTC
T ss_pred --HHHHHHHHHcCC
Confidence 999999987653
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=4.8e-29 Score=212.43 Aligned_cols=159 Identities=15% Similarity=0.080 Sum_probs=142.7
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCCCCC-CCCCcHHHHHHHhCCH----HHHHHHHHCCCCCCccCCCCCcHHHHHH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLGKIS-TAKWRPLQTLTLSMQI----RYMDMLLDGGLDIDSVDKDGLTALHKAI 208 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~-~~g~t~L~~A~~~g~~----~~v~~Ll~~gadi~~~d~~g~t~L~~A~ 208 (328)
..++.+++.|+.+.++.++..+.+. .+ ..|+||||+|+..|+. +++++|+++|+++|.++..|+||||+|+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~----~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYED----KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSC----HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCccc----ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4689999999999999999877432 23 6799999999999975 5999999999999999999999999999
Q ss_pred HcCC------HHHHHHHHHCCCCCCCCCCCCC-hHHHHHHHcC-----CHHHHHHHHh-CCCCccccCCCCCcHHHHHHH
Q 020274 209 IGKK------EAVISHLLRKGANPHVKDGDGA-TPLHYAVQVG-----AMQSVKLLIK-YNVDVNVADNEGWTPLHIAIQ 275 (328)
Q Consensus 209 ~~g~------~~~v~~Ll~~g~d~~~~d~~g~-tpLh~A~~~g-----~~~iv~~Ll~-~ga~in~~d~~g~TpL~~A~~ 275 (328)
..++ .+++++|+++|++++.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|.||||+|+.
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 9887 6889999999999999999999 9999999954 4579999999 999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCC
Q 020274 276 SRNRDIAKVLLINGADKSRKT 296 (328)
Q Consensus 276 ~g~~~iv~~Ll~~gad~~~~d 296 (328)
.|+.++|++|+....+.+.++
T Consensus 164 ~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 164 CQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp TTCHHHHHHHHHHHHHHTCCC
T ss_pred cCCHHHHHHHHHHHHHHhccc
Confidence 999999999998766555554
No 85
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=2e-28 Score=197.19 Aligned_cols=130 Identities=32% Similarity=0.388 Sum_probs=92.4
Q ss_pred CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcH
Q 020274 190 GLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTP 269 (328)
Q Consensus 190 gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~Tp 269 (328)
|+|+ .++..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 4556 566677777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 270 LHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 270 L~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+. .+++++|..
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~----~~~l~~l~~ 130 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM----KSLLLLPEK 130 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHH----HHHHSCC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccH----HHHHhhccc
Confidence 777777777777777777777777777777777777766554 566555544
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=3.5e-27 Score=189.86 Aligned_cols=125 Identities=38% Similarity=0.511 Sum_probs=120.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHc
Q 020274 197 DKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQS 276 (328)
Q Consensus 197 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~ 276 (328)
...+.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 277 RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 277 g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
|+.+++++|+++|++++.+|..|.||||+|+.+|+ .+++++|..+
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~----~~~~~~Ll~~ 135 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN----EDLAEILQKL 135 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCC----HHHHHHHHHc
Confidence 99999999999999999999999999999999999 9999999865
No 87
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=6.9e-27 Score=210.86 Aligned_cols=155 Identities=24% Similarity=0.288 Sum_probs=146.8
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCC-CCCCCCCCCCCCcHHHHHH-----HhCCHHHHHHHHHCCCCCCccCCCCCcHHHH
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNA-TPNLGKISTAKWRPLQTLT-----LSMQIRYMDMLLDGGLDIDSVDKDGLTALHK 206 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~-~~~~~~~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~ 206 (328)
...++.|+..+..+.++.|++.|. +++. .+..|+||||+|+ ..++.+++++|++.|.+++..+..|.||||+
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~--~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 189 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDK--QNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALML 189 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTC--CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCC--CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 457899999999999999999997 5554 4788999999999 6789999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHh-CCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 020274 207 AIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIK-YNVDVNVADNEGWTPLHIAIQSRNRDIAKVL 285 (328)
Q Consensus 207 A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~-~ga~in~~d~~g~TpL~~A~~~g~~~iv~~L 285 (328)
|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|++ +|++++.+|..|.||||+|+..|+.+++++|
T Consensus 190 A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~L 269 (276)
T 4hbd_A 190 AVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASML 269 (276)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHcC
Q 020274 286 LING 289 (328)
Q Consensus 286 l~~g 289 (328)
++++
T Consensus 270 l~~~ 273 (276)
T 4hbd_A 270 YSRM 273 (276)
T ss_dssp HHHC
T ss_pred Hhcc
Confidence 9874
No 88
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=6.6e-27 Score=213.90 Aligned_cols=139 Identities=21% Similarity=0.236 Sum_probs=126.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHCCCCCCc------cCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCChHH
Q 020274 167 KWRPLQTLTLSMQIRYMDMLLDGGLDIDS------VDKDGLTALHKAIIG---KKEAVISHLLRKGANPHVKDGDGATPL 237 (328)
Q Consensus 167 g~t~L~~A~~~g~~~~v~~Ll~~gadi~~------~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~d~~~~d~~g~tpL 237 (328)
..++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++|+++|++++.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 34679999999999999999999999998 688999999999997 899999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 020274 238 HYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGR 311 (328)
Q Consensus 238 h~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~ 311 (328)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+.+|+
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999987 58899999999987
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=2.4e-26 Score=181.00 Aligned_cols=125 Identities=38% Similarity=0.576 Sum_probs=120.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCC
Q 020274 199 DGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN 278 (328)
Q Consensus 199 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~ 278 (328)
+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 279 RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 279 ~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
.+++++|+++|++++.+|..|.|||++|+..|+ .+++++|.....
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~----~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH----LEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCc----HHHHHHHHHcCC
Confidence 999999999999999999999999999999998 999999987543
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=2.4e-27 Score=190.86 Aligned_cols=129 Identities=23% Similarity=0.276 Sum_probs=119.9
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q 020274 163 ISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQ 242 (328)
Q Consensus 163 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~ 242 (328)
.+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK 85 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 020274 243 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 291 (328)
Q Consensus 243 ~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 291 (328)
.|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+.+..
T Consensus 86 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 86 NGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 9999999999999999999999999999999999999999888776543
No 91
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=8e-27 Score=192.20 Aligned_cols=129 Identities=25% Similarity=0.309 Sum_probs=120.2
Q ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCc-HHHH
Q 020274 194 DSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWT-PLHI 272 (328)
Q Consensus 194 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~T-pL~~ 272 (328)
+..+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+ .|+.+++++|+++|++++.++..|.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 455678999999999999999999999999999999999999999985 99999999999999999999999999 9999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCCC
Q 020274 273 AIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 327 (328)
Q Consensus 273 A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~~ 327 (328)
|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+ .+++++|.....
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~----~~~v~~Ll~~ga 135 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH----RDVARYLRAAAG 135 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTC----HHHHHHHSSCC-
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCH----HHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999 999999987643
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=9.3e-27 Score=196.98 Aligned_cols=140 Identities=23% Similarity=0.261 Sum_probs=130.3
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHHHH
Q 020274 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKD-GDGATPLHYAVQ 242 (328)
Q Consensus 164 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d-~~g~tpLh~A~~ 242 (328)
+..|+||||+|+..|+.++++.|++ |++++.++..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 3467899999999999999999999 99999999999999999999999999999999999999998 899999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHH
Q 020274 243 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 322 (328)
Q Consensus 243 ~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL 322 (328)
.|+.+++++|+++|++++.+|..|.||||+|+..++. ..+.+||++|+..|+ .+++++|
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~----~~i~~~L 178 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGL----EKVINVL 178 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHH----HHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCH----HHHHHHH
Confidence 9999999999999999999999999999999875432 456799999999998 9999999
Q ss_pred hhC
Q 020274 323 KIL 325 (328)
Q Consensus 323 ~~~ 325 (328)
...
T Consensus 179 ~~~ 181 (183)
T 3deo_A 179 EGQ 181 (183)
T ss_dssp HTC
T ss_pred HHh
Confidence 764
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=1.5e-26 Score=204.91 Aligned_cols=138 Identities=24% Similarity=0.278 Sum_probs=128.9
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHHHHc
Q 020274 165 TAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKD-GDGATPLHYAVQV 243 (328)
Q Consensus 165 ~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d-~~g~tpLh~A~~~ 243 (328)
..|.||||+|+..|+.+++++|++ |++++.++..|+||||+|+..|+.++|++|+++|++++.++ ..|+||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 468899999999999999999999 99999999999999999999999999999999999999998 7899999999999
Q ss_pred CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHh
Q 020274 244 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 323 (328)
Q Consensus 244 g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~ 323 (328)
|+.+++++|+++|++++.+|..|.||||+|+..++ ...+.|||++|+..|+ .+++++|.
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~----~~iv~~L~ 180 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGL----EKVINVLE 180 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHH----HHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcCh----HHHHHHHH
Confidence 99999999999999999999999999999986322 2567899999999998 89999987
Q ss_pred h
Q 020274 324 I 324 (328)
Q Consensus 324 ~ 324 (328)
.
T Consensus 181 ~ 181 (244)
T 3ui2_A 181 G 181 (244)
T ss_dssp H
T ss_pred H
Confidence 5
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=6e-27 Score=203.86 Aligned_cols=137 Identities=19% Similarity=0.224 Sum_probs=117.5
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCChHHHHHHH
Q 020274 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRK-GANPHVKDGDGATPLHYAVQ 242 (328)
Q Consensus 164 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpLh~A~~ 242 (328)
+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+||..|+.+++++|+++ |++++.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 020274 243 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGK 300 (328)
Q Consensus 243 ~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~ 300 (328)
.|+.+++++|+++|++++.+|..|.||||+|+..++.++++.|+.+|++...++..|.
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999999999999999999999999999999999999999988876653
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=8.5e-26 Score=178.44 Aligned_cols=110 Identities=27% Similarity=0.378 Sum_probs=90.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHc
Q 020274 197 DKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQS 276 (328)
Q Consensus 197 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~ 276 (328)
+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34567888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 020274 277 RNRDIAKVLLINGADKSRKTKDGKTALDMS 306 (328)
Q Consensus 277 g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 306 (328)
|+.+++++|+++|++++.+|..|.||||+|
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 888888888888888888888888888888
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=8.2e-26 Score=178.54 Aligned_cols=112 Identities=23% Similarity=0.244 Sum_probs=106.7
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHc
Q 020274 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQV 243 (328)
Q Consensus 164 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 243 (328)
+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCccccCCCCCcHHHHHHH
Q 020274 244 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQ 275 (328)
Q Consensus 244 g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~ 275 (328)
|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 99999999999999999999999999999943
No 97
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=1e-24 Score=212.57 Aligned_cols=136 Identities=21% Similarity=0.252 Sum_probs=119.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHCCCCCCcc------CCCCCcHHHHHHH---cCCHHHHHHHHHCCCCCCCCCCCCChHH
Q 020274 167 KWRPLQTLTLSMQIRYMDMLLDGGLDIDSV------DKDGLTALHKAII---GKKEAVISHLLRKGANPHVKDGDGATPL 237 (328)
Q Consensus 167 g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~------d~~g~t~L~~A~~---~g~~~~v~~Ll~~g~d~~~~d~~g~tpL 237 (328)
..+.||.|+..|+.++++.|++.|+++|.+ +..|.||||+||. .|+.+++++|+++|+++|.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 347899999999999999999999999987 8889999999976 8999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 020274 238 HYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLC 308 (328)
Q Consensus 238 h~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~ 308 (328)
|+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. ||+|.+..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeecc
Confidence 999999999999999999999999999999999999999999999999999999987 45665543
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1e-25 Score=196.06 Aligned_cols=126 Identities=25% Similarity=0.238 Sum_probs=116.8
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCCcHHHHHH
Q 020274 196 VDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKY-NVDVNVADNEGWTPLHIAI 274 (328)
Q Consensus 196 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~-ga~in~~d~~g~TpL~~A~ 274 (328)
.+..|.||||+||..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 275 QSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 275 ~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
..|+.+++++|+++|++++.+|..|.|||++|+..|+ .++++.|...
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~~l~~l~~~ 195 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC----ASLLKKKQGT 195 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH----HHHHC-----
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH----HHHHHHHhcc
Confidence 9999999999999999999999999999999999887 8888877654
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=1.4e-26 Score=217.95 Aligned_cols=162 Identities=10% Similarity=0.015 Sum_probs=132.1
Q ss_pred hhChHHHHHHHhcCCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCC---CccCCCCCcHHHHHHHcCCHHHHHH
Q 020274 142 QLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDI---DSVDKDGLTALHKAIIGKKEAVISH 218 (328)
Q Consensus 142 ~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi---~~~d~~g~t~L~~A~~~g~~~~v~~ 218 (328)
.+..+.++.++..|. .++||||+|+..|+.++|++|++.|+.. +..+..|.||||+|+..|+.++|++
T Consensus 76 ~~~~~~~~~l~~~g~---------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~ 146 (376)
T 2aja_A 76 RNAKQLWSDAHKKGI---------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 146 (376)
T ss_dssp TTCTTHHHHHHHHTC---------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHcCC---------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHH
Confidence 345556666666654 3459999999999999999999998832 2334457899999999999999999
Q ss_pred HHHCCCCC---CCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccc--cCCCCCcHHHHHH-HcCCHHHHHHHHHcCCCC
Q 020274 219 LLRKGANP---HVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNV--ADNEGWTPLHIAI-QSRNRDIAKVLLINGADK 292 (328)
Q Consensus 219 Ll~~g~d~---~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~--~d~~g~TpL~~A~-~~g~~~iv~~Ll~~gad~ 292 (328)
|+++|+++ +..+.. .||||+|+..|+.++|++|+++|++++. .+..|.||||+|+ ..|+.++|++|+++|++
T Consensus 147 Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~- 224 (376)
T 2aja_A 147 LCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM- 224 (376)
T ss_dssp HHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-
T ss_pred HHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-
Confidence 99999752 222223 8999999999999999999999999887 8888999999999 99999999999998853
Q ss_pred CCCCCCCCcHHHHHHHcCCCCChHHHHHHHhh
Q 020274 293 SRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 324 (328)
Q Consensus 293 ~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~ 324 (328)
|.|||++|+.+|+ .+++++|..
T Consensus 225 ------~~taL~~Aa~~g~----~evv~lL~~ 246 (376)
T 2aja_A 225 ------LAYAEIHEFEYGE----KYVNPFIAR 246 (376)
T ss_dssp ------HHHHHHCTTTTTT----TTHHHHHHH
T ss_pred ------cchHHHHHHHCCC----HHHHHHHHh
Confidence 8899999999998 778888865
No 100
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=1e-26 Score=218.88 Aligned_cols=181 Identities=9% Similarity=0.045 Sum_probs=150.8
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCC-CCCCCCCCcHHHHHHHhCCHHHHHHHHHCCCCC---CccCCCCCcHHHHHHH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNL-GKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDI---DSVDKDGLTALHKAII 209 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi---~~~d~~g~t~L~~A~~ 209 (328)
..++.|+..|..+.++.+++.|..... ...+..|.||||+|+..|+.++|++|+++|+++ +..+.. .||||+||.
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~ 172 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAE 172 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHH
Confidence 679999999999999999999874322 234557889999999999999999999999762 222222 899999999
Q ss_pred cCCHHHHHHHHHCCCCCCC--CCCCCChHHHHHH-HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 020274 210 GKKEAVISHLLRKGANPHV--KDGDGATPLHYAV-QVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLL 286 (328)
Q Consensus 210 ~g~~~~v~~Ll~~g~d~~~--~d~~g~tpLh~A~-~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll 286 (328)
.|+.++|++|+++|++++. ++..|.||||+|+ ..|+.++|++|+++|++ |.||||+|+..|+.+++++|+
T Consensus 173 ~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 173 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp TTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHH
Confidence 9999999999999999887 8888999999999 99999999999998742 889999999999999999999
Q ss_pred HcCCCCC-------------------------------------------------------------CCCCCCCcHHHH
Q 020274 287 INGADKS-------------------------------------------------------------RKTKDGKTALDM 305 (328)
Q Consensus 287 ~~gad~~-------------------------------------------------------------~~d~~G~TpL~~ 305 (328)
++|++++ .....+.|||++
T Consensus 246 ~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~ 325 (376)
T 2aja_A 246 RHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRL 325 (376)
T ss_dssp HHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHH
T ss_pred hcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHH
Confidence 8775431 112346689999
Q ss_pred HHHcCCCCChHHHHHHHhhCC
Q 020274 306 SLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 306 A~~~g~~~~~~~i~~lL~~~~ 326 (328)
|+..|+ .+++++|...|
T Consensus 326 A~~~g~----~e~v~lLl~~~ 342 (376)
T 2aja_A 326 ALRLGN----QGACALLLSIP 342 (376)
T ss_dssp HHHHTC----TTHHHHHTTSH
T ss_pred HHHcCc----HHHHHHHHcCh
Confidence 999999 89999998765
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=3.6e-24 Score=200.84 Aligned_cols=147 Identities=27% Similarity=0.333 Sum_probs=120.6
Q ss_pred CCCCcHHHHHHHh-CCHHHHHHHHHCCCCCCccC--CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHH
Q 020274 165 TAKWRPLQTLTLS-MQIRYMDMLLDGGLDIDSVD--KDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAV 241 (328)
Q Consensus 165 ~~g~t~L~~A~~~-g~~~~v~~Ll~~gadi~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~ 241 (328)
..+.|+||.|+.. |+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3456899999999 99999999999999999998 88999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCcHHHHHHHcCC
Q 020274 242 QVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING---ADKSRKTKDGKTALDMSLCYGR 311 (328)
Q Consensus 242 ~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g---ad~~~~d~~G~TpL~~A~~~g~ 311 (328)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+.+| ++....+..+.|+++++.....
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999775 4455667778899998876653
No 102
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=1.6e-24 Score=183.10 Aligned_cols=116 Identities=25% Similarity=0.314 Sum_probs=110.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCCcHHHHHHH
Q 020274 197 DKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVAD-NEGWTPLHIAIQ 275 (328)
Q Consensus 197 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d-~~g~TpL~~A~~ 275 (328)
+..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4468899999999999999999999 99999999999999999999999999999999999999998 889999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 020274 276 SRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDF 313 (328)
Q Consensus 276 ~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~ 313 (328)
.|+.+++++|+++|++++.+|..|.||||+|+..++..
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 157 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTT 157 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCc
Confidence 99999999999999999999999999999999887643
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=2.4e-23 Score=188.17 Aligned_cols=127 Identities=24% Similarity=0.345 Sum_probs=118.7
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHCCCCCC------ccCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCChH
Q 020274 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDID------SVDKDGLTALHKAIIG---KKEAVISHLLRKGANPHVKDGDGATP 236 (328)
Q Consensus 166 ~g~t~L~~A~~~g~~~~v~~Ll~~gadi~------~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~d~~~~d~~g~tp 236 (328)
...++|+.|+..|+.+.++.++..|++++ ..+..|.||||+|+.. |+.+++++|+++|++++.+|..|+||
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~Tp 208 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCH
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCH
Confidence 34578999999999999999999999854 4478899999999998 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 020274 237 LHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADK 292 (328)
Q Consensus 237 Lh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 292 (328)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999864
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=4.9e-24 Score=194.85 Aligned_cols=141 Identities=18% Similarity=0.125 Sum_probs=124.6
Q ss_pred cHHHHHHHHhhChHHHHHHHhcCCCCCCC----CCCCCCCcHHHHHHHh---CCHHHHHHHHHCCCCCCccCCCCCcHHH
Q 020274 133 EEDLLKEVEQLLEPEEREILNQNATPNLG----KISTAKWRPLQTLTLS---MQIRYMDMLLDGGLDIDSVDKDGLTALH 205 (328)
Q Consensus 133 ~~~l~~ai~~~~~~~v~~lL~~g~~~~~~----~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~gadi~~~d~~g~t~L~ 205 (328)
...++.|+..++.+.++.++..|.+++.. ..+..|+||||+|+.. |+.+++++|+++|++++.+|..|.||||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh 231 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence 45799999999999999999999988752 1477899999999997 8999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCH
Q 020274 206 KAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNR 279 (328)
Q Consensus 206 ~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~ 279 (328)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999876 589999999998864
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=8e-23 Score=184.69 Aligned_cols=122 Identities=21% Similarity=0.255 Sum_probs=115.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCC------CCCCCCChHHHHHHHc---CCHHHHHHHHhCCCCccccCCCCCcHHH
Q 020274 201 LTALHKAIIGKKEAVISHLLRKGANPH------VKDGDGATPLHYAVQV---GAMQSVKLLIKYNVDVNVADNEGWTPLH 271 (328)
Q Consensus 201 ~t~L~~A~~~g~~~~v~~Ll~~g~d~~------~~d~~g~tpLh~A~~~---g~~~iv~~Ll~~ga~in~~d~~g~TpL~ 271 (328)
.++|+.|+..|+.+.+..++..|++++ ..+..|+||||+|+.. |+.+++++|+++|+++|.+|..|+||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 468999999999999999999999954 4578999999999999 8999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhCC
Q 020274 272 IAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 326 (328)
Q Consensus 272 ~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~~ 326 (328)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|....
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~----~~~v~~Ll~~g 261 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH----EHCEELLTQAL 261 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCC----HHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999 99999997643
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=3e-23 Score=155.74 Aligned_cols=92 Identities=41% Similarity=0.609 Sum_probs=60.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCH
Q 020274 200 GLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNR 279 (328)
Q Consensus 200 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~ 279 (328)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 56666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHcCCC
Q 020274 280 DIAKVLLINGAD 291 (328)
Q Consensus 280 ~iv~~Ll~~gad 291 (328)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 666666666654
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=1e-23 Score=186.64 Aligned_cols=114 Identities=25% Similarity=0.334 Sum_probs=109.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCCcHHHHHHHc
Q 020274 198 KDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVAD-NEGWTPLHIAIQS 276 (328)
Q Consensus 198 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d-~~g~TpL~~A~~~ 276 (328)
..|.||||+|+..|+.+++++|++ |++++.++..|+||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 468899999999999999999999 99999999999999999999999999999999999999998 7899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 020274 277 RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRD 312 (328)
Q Consensus 277 g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~ 312 (328)
|+.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 157 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELAREILKT 157 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc
Confidence 999999999999999999999999999999976653
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=7.1e-23 Score=192.04 Aligned_cols=125 Identities=25% Similarity=0.352 Sum_probs=119.0
Q ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHHCCCCCCCCC--CCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHH
Q 020274 197 DKDGLTALHKAIIG-KKEAVISHLLRKGANPHVKD--GDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIA 273 (328)
Q Consensus 197 d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~d~~~~d--~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A 273 (328)
...+.|+||+|+.. ++.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34567899999999 99999999999999999988 8999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCChHHHHHHHhhC
Q 020274 274 IQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 325 (328)
Q Consensus 274 ~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~~~~~i~~lL~~~ 325 (328)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|...
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~----~~iv~lLl~~ 323 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN----ADIVTLLRLA 323 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCC----HHHHHHHHHc
Confidence 99999999999999999999999999999999999999 9999998753
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.2e-22 Score=152.38 Aligned_cols=93 Identities=33% Similarity=0.511 Sum_probs=89.5
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC
Q 020274 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGA 245 (328)
Q Consensus 166 ~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 245 (328)
+|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCC
Q 020274 246 MQSVKLLIKYNVD 258 (328)
Q Consensus 246 ~~iv~~Ll~~ga~ 258 (328)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999975
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=1.2e-23 Score=163.92 Aligned_cols=107 Identities=36% Similarity=0.509 Sum_probs=61.0
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHH
Q 020274 196 VDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQ 275 (328)
Q Consensus 196 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~ 275 (328)
+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 34455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 020274 276 SRNRDIAKVLLINGADKSRKTKDGKTA 302 (328)
Q Consensus 276 ~g~~~iv~~Ll~~gad~~~~d~~G~Tp 302 (328)
.|+.+++++|+++|++++.++..|.||
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred CCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 555555555555555555555555554
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=9.9e-23 Score=158.66 Aligned_cols=108 Identities=31% Similarity=0.341 Sum_probs=102.7
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q 020274 163 ISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQ 242 (328)
Q Consensus 163 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~ 242 (328)
.+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|+||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHH
Q 020274 243 VGAMQSVKLLIKYNVDVNVADNEGWTPL 270 (328)
Q Consensus 243 ~g~~~iv~~Ll~~ga~in~~d~~g~TpL 270 (328)
.|+.+++++|+++|++++.++..|.||-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999874
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=4.4e-22 Score=193.98 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=118.3
Q ss_pred HHHHHHHHhhChHHHHHHHhcCCCCCCC----CCCCCCCcHHHHHHH---hCCHHHHHHHHHCCCCCCccCCCCCcHHHH
Q 020274 134 EDLLKEVEQLLEPEEREILNQNATPNLG----KISTAKWRPLQTLTL---SMQIRYMDMLLDGGLDIDSVDKDGLTALHK 206 (328)
Q Consensus 134 ~~l~~ai~~~~~~~v~~lL~~g~~~~~~----~~~~~g~t~L~~A~~---~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~ 206 (328)
..|+.|+..++.+.++.+|+.|.+++.. ..+..|+||||+|+. .|+.+++++|+++|+++|.+|..|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 6799999999999999999999988754 236789999999977 899999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHH
Q 020274 207 AIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAI 274 (328)
Q Consensus 207 A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~ 274 (328)
|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|+|.++
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 9999999999999999999999999999999999999999999999999999887 4666554
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=4.6e-20 Score=142.84 Aligned_cols=92 Identities=36% Similarity=0.504 Sum_probs=68.5
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 020274 228 VKDGDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSL 307 (328)
Q Consensus 228 ~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 307 (328)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 34566777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HcCCCCChHHHHHHHh
Q 020274 308 CYGRDFKSYDLAKLLK 323 (328)
Q Consensus 308 ~~g~~~~~~~i~~lL~ 323 (328)
.+|+ .+++++|+
T Consensus 99 ~~~~----~~~~~~L~ 110 (110)
T 2zgd_A 99 DNGN----EDLAEILQ 110 (110)
T ss_dssp HHTC----HHHHHHHC
T ss_pred HcCC----HHHHHHhC
Confidence 7777 77777763
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=1.6e-19 Score=139.82 Aligned_cols=89 Identities=25% Similarity=0.309 Sum_probs=46.2
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHc
Q 020274 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVISHLLRKGANPHVKDGDGATPLHYAVQV 243 (328)
Q Consensus 164 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 243 (328)
+..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHc
Confidence 44455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCHHHHHHH
Q 020274 244 GAMQSVKLL 252 (328)
Q Consensus 244 g~~~iv~~L 252 (328)
|+.+++++|
T Consensus 101 ~~~~~~~~L 109 (110)
T 2zgd_A 101 GNEDLAEIL 109 (110)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 555555443
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=48.72 E-value=14 Score=35.10 Aligned_cols=100 Identities=10% Similarity=0.101 Sum_probs=45.3
Q ss_pred HHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHH----HHHHCCCCCCCCCCCCChHHHHHHHcCCHHH----HHHH
Q 020274 181 RYMDMLLDGGLDIDSVDKDGLTALHKAIIGKKEAVIS----HLLRKGANPHVKDGDGATPLHYAVQVGAMQS----VKLL 252 (328)
Q Consensus 181 ~~v~~Ll~~gadi~~~d~~g~t~L~~A~~~g~~~~v~----~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~i----v~~L 252 (328)
++.+.+...|..++.... .+.+...+..|..+-+. .+.+.|..|+... -.+.|...+..|..+- .+.+
T Consensus 91 ~lf~~M~~~G~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEATF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHHHHHHHTTCCCCHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHHH
Confidence 344555556665554321 13344445566654333 3334565554321 1223334445565543 3333
Q ss_pred HhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 020274 253 IKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLL 286 (328)
Q Consensus 253 l~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll 286 (328)
.+.|..++.... .+.+...++.|..+-+.-|+
T Consensus 167 ~~~G~~Pd~~ty--~~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 167 VESEVVPEEPEL--AALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHH
T ss_pred HhcCCCCCHHHH--HHHHHHHhhCCCHHHHHHHH
Confidence 444555544321 23444445566655444444
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=37.39 E-value=50 Score=31.17 Aligned_cols=93 Identities=9% Similarity=0.029 Sum_probs=46.6
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHH----HHHhCCCCccccCCCCCcHHHHHHHcCCHHHHH----HH
Q 020274 214 AVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQSVK----LLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAK----VL 285 (328)
Q Consensus 214 ~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~iv~----~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~----~L 285 (328)
++.+.+.+.|..|+... -.+.+...+..|..+-+. .+.+.|..++.... .+.|...++.|..+-+. .+
T Consensus 91 ~lf~~M~~~G~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEAT--FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHHHHHHHTTCCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHH
Confidence 45555666776665431 123444555666655433 33345665554321 23444455666655333 33
Q ss_pred HHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 020274 286 LINGADKSRKTKDGKTALDMSLCYGRD 312 (328)
Q Consensus 286 l~~gad~~~~d~~G~TpL~~A~~~g~~ 312 (328)
.+.|..|+.... .+.+...++.|+.
T Consensus 167 ~~~G~~Pd~~ty--~~Li~~~~~~g~~ 191 (501)
T 4g26_A 167 VESEVVPEEPEL--AALLKVSMDTKNA 191 (501)
T ss_dssp HHTTCCCCHHHH--HHHHHHHHHTTCH
T ss_pred HhcCCCCCHHHH--HHHHHHHhhCCCH
Confidence 455766655432 2455555666653
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=26.13 E-value=1.6e+02 Score=27.22 Aligned_cols=51 Identities=6% Similarity=-0.118 Sum_probs=37.1
Q ss_pred HHHHhhChHHHHHHHhcCCCCCCCC------------CCCCCCcHHHHHHHhCCHHHHHHHHH
Q 020274 138 KEVEQLLEPEEREILNQNATPNLGK------------ISTAKWRPLQTLTLSMQIRYMDMLLD 188 (328)
Q Consensus 138 ~ai~~~~~~~v~~lL~~g~~~~~~~------------~~~~g~t~L~~A~~~g~~~~v~~Ll~ 188 (328)
..|..|+...|...+..|.+++-.- .-.-|.|.+|+|+...+-+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3466888999999999998876331 12357777777777777777777775
No 118
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=24.39 E-value=16 Score=33.92 Aligned_cols=8 Identities=25% Similarity=0.650 Sum_probs=3.1
Q ss_pred ccccceec
Q 020274 13 GFSTFVPL 20 (328)
Q Consensus 13 ~~~~~~~~ 20 (328)
||.--|-|
T Consensus 228 gF~L~F~F 235 (417)
T 2ayu_A 228 GFKLLFRF 235 (417)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 34333333
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.20 E-value=1.9e+02 Score=26.62 Aligned_cols=49 Identities=20% Similarity=0.236 Sum_probs=38.1
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCcc------------C--CCCCcHHHHHHHcCCHHHHHHHHH
Q 020274 173 TLTLSMQIRYMDMLLDGGLDIDSV------------D--KDGLTALHKAIIGKKEAVISHLLR 221 (328)
Q Consensus 173 ~A~~~g~~~~v~~Ll~~gadi~~~------------d--~~g~t~L~~A~~~g~~~~v~~Ll~ 221 (328)
+.+..|+...|+..+..|.+++.+ + .-|.|.+|+|++..+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 345679999999999988876532 1 238888999999888888888886
No 120
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=23.07 E-value=2.4e+02 Score=22.52 Aligned_cols=135 Identities=10% Similarity=0.012 Sum_probs=86.3
Q ss_pred cccHHHHHHHHhhChHHHHHHHhcCCCCCCCCCCCCCCcHH-HHHHHhCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHH
Q 020274 131 KYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPL-QTLTLSMQIRYMDMLLDGGLDIDSVDKDGLTALHKAII 209 (328)
Q Consensus 131 ~~~~~l~~ai~~~~~~~v~~lL~~g~~~~~~~~~~~g~t~L-~~A~~~g~~~~v~~Ll~~gadi~~~d~~g~t~L~~A~~ 209 (328)
+...++--|++.|+.+....+.+... +...|.-| ..|...|++++++....+--|+. ..+.+...
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l~-------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~-------~L~~Ly~~ 72 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKLN-------DSITWERLIQEALAQGNASLAEMIYQTQHSFD-------KLSFLYLV 72 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHC-------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-------HHHHHHHH
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHhC-------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-------HHHHHHHH
Confidence 44567788889999888887766431 22344444 46677799999998887655543 24455556
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHH-HHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 020274 210 GKKEAVISHLLRKGANPHVKDGDGATPLHYAVQVGAMQ-SVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLIN 288 (328)
Q Consensus 210 ~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~-iv~~Ll~~ga~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 288 (328)
.|+.+-++.|.+.- .....-+.+.+.+...|+.+ ++++|++.|- ..-+...|..+|..++++-+++.
T Consensus 73 tg~~e~L~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r--------~~eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 73 TGDVNKLSKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGGS--------LPLAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HTCHHHHHHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC--------HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCC--------hHHHHHHHHHcCcHHHHHHHHHH
Confidence 77777766664421 01123345678887888765 7888877631 11245566778999999888743
Q ss_pred -CCC
Q 020274 289 -GAD 291 (328)
Q Consensus 289 -gad 291 (328)
|.+
T Consensus 141 ~~~~ 144 (177)
T 3mkq_B 141 AEVD 144 (177)
T ss_dssp TTCC
T ss_pred hCCc
Confidence 543
No 121
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=22.62 E-value=19 Score=31.23 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=0.0
Q ss_pred cccCCCCCCCCCCCCCCCCccchhhhccCC
Q 020274 74 GEWEDPDDGSGSEYDDDDDDDEEGEVKEND 103 (328)
Q Consensus 74 ~~~dd~dd~~d~d~ddddddd~~~~~~~~~ 103 (328)
++.+|++++++++++|++++.++.+.++..
T Consensus 225 ~~~~d~e~~~e~e~~d~~~~~~~~d~e~~~ 254 (264)
T 2zd7_A 225 DEEGESGLSADGDSEDDDGSLGEVDLPLSD 254 (264)
T ss_dssp C-----------------------------
T ss_pred cCcccccccccccccccccccccccccccc
No 122
>2d46_A Calcium channel, voltage-dependent, beta 4 subunit isoform A; Ca2+ channel, BETA4A subunit, nuclear magnetic resonance, alternative spliving; NMR {Homo sapiens}
Probab=22.13 E-value=29 Score=22.41 Aligned_cols=12 Identities=42% Similarity=0.814 Sum_probs=9.3
Q ss_pred cccccccccccc
Q 020274 4 FVLKNSYLHGFS 15 (328)
Q Consensus 4 ~~~~~~~~~~~~ 15 (328)
+.-.|+|+|||-
T Consensus 3 ~m~~~~y~~g~~ 14 (61)
T 2d46_A 3 HMYDNLYLHGIE 14 (61)
T ss_dssp CGGGGGGCSSCC
T ss_pred ccccchhccccc
Confidence 456789999985
Done!