BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020275
(328 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4ZGQ8|HMT1_BRAOT Homocysteine S-methyltransferase 1 OS=Brassica oleracea var.
italica GN=HMT1 PE=1 SV=1
Length = 326
Score = 546 bits (1408), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/327 (78%), Positives = 294/327 (89%), Gaps = 1/327 (0%)
Query: 1 MGKENTTASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVH 60
MG E +A L+DLIEK GGCAV+DGGFATQLE HGA+INDPLWSA+ LIK P L+KRVH
Sbjct: 1 MGLEKKSAL-LEDLIEKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKDPELIKRVH 59
Query: 61 LEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPG 120
+EYLEAGAD++VTSSYQATIPGFLSRGLS+EE+ESLL+KSV LAVEARD+FWD V K G
Sbjct: 60 MEYLEAGADVVVTSSYQATIPGFLSRGLSMEESESLLQKSVKLAVEARDRFWDKVSKTSG 119
Query: 121 HNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE 180
H+YNRALVAASIGSYGAYLADGSEYSG+YG V L+KLKDFHRRR+QVLVE+ PDLLAFE
Sbjct: 120 HSYNRALVAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFE 179
Query: 181 TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240
TIPNKLEAQA VELLEEEN+QIP+WICF+SVDGENAPSGESF+ECL+ +NKS + AVGI
Sbjct: 180 TIPNKLEAQACVELLEEENVQIPAWICFTSVDGENAPSGESFQECLETLNKSNNICAVGI 239
Query: 241 NCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRD 300
NCAPPQF++NLI F +LT+KAIVVYPNSGEVWDG+AKKWLPS+C GD +FE FAT+WRD
Sbjct: 240 NCAPPQFMDNLIRKFSKLTQKAIVVYPNSGEVWDGKAKKWLPSQCFGDAEFEMFATKWRD 299
Query: 301 SGAKLIGGCCRTTPSTIQAVSKVLKER 327
GAKLIGGCCRTTPSTI+A+S+ LK R
Sbjct: 300 LGAKLIGGCCRTTPSTIKAISRDLKRR 326
>sp|Q9SDL7|HMT1_ARATH Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1
PE=1 SV=1
Length = 326
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/317 (80%), Positives = 288/317 (90%)
Query: 11 LDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADI 70
L+DLI+K GGCAV+DGGFATQLE HGA+INDPLWSA+ LIK P L+KRVH+EYLEAGADI
Sbjct: 10 LEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAGADI 69
Query: 71 LVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130
+VTSSYQATIPGFLSRGLSIEE+ESLL+KSV LAVEARD+FW+ V KV GH+YNRALVAA
Sbjct: 70 VVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAA 129
Query: 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQA 190
SIGSYGAYLADGSEYSG+YG V L+KLKDFHRRRLQVLVE+GPDLLAFETIPNKLEAQA
Sbjct: 130 SIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQA 189
Query: 191 LVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVEN 250
VELLEEE +QIP+WICF+SVDGE APSGESF+ECL+ +NKS + AVGINCAPPQF+EN
Sbjct: 190 CVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGINCAPPQFIEN 249
Query: 251 LICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCC 310
LI F +LTKKAIVVYPNSGEVWDG+AK+WLPS+C GD +FE FAT+WRD GAKLIGGCC
Sbjct: 250 LIRKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDLGAKLIGGCC 309
Query: 311 RTTPSTIQAVSKVLKER 327
RTTPSTI A+S+ LK R
Sbjct: 310 RTTPSTINAISRDLKRR 326
>sp|Q9FUN0|HMT1_MAIZE Homocysteine S-methyltransferase 1 OS=Zea mays GN=HMT-1 PE=2 SV=1
Length = 323
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 225/318 (70%), Positives = 267/318 (83%)
Query: 11 LDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADI 70
L+DL+ +AGGCAVIDGGFATQLE GA INDPLWSA LI +PHLVK VH++YLEAGAD+
Sbjct: 4 LEDLVARAGGCAVIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGADV 63
Query: 71 LVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130
+++SSYQATIPGF++RG+S+ EAE LL SV LA EARD+FW + + YNRALVAA
Sbjct: 64 IISSSYQATIPGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYNRALVAA 123
Query: 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQA 190
SIGSYGAYLADGSEYSG+YG + EKLKDFHRRRLQVL +GPDL+AFE IPN++EAQA
Sbjct: 124 SIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQA 183
Query: 191 LVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVEN 250
LVELLEEE +QIPSWICFSSVDG+N SGESF +CL I+N S KV VG+NC PPQF+E
Sbjct: 184 LVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLKILNASEKVAVVGVNCTPPQFIEG 243
Query: 251 LICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCC 310
+IC F++ TKKAI VYPNSGEVWDGRAK+WLP +CLG F++ A RW+++GA LIGGCC
Sbjct: 244 IICEFRKQTKKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDALAKRWQEAGASLIGGCC 303
Query: 311 RTTPSTIQAVSKVLKERS 328
RTTPSTI+AVSK+LK R+
Sbjct: 304 RTTPSTIRAVSKILKGRT 321
>sp|Q8LAX0|HMT3_ARATH Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana GN=HMT3
PE=1 SV=2
Length = 347
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 243/327 (74%), Gaps = 7/327 (2%)
Query: 7 TASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEA 66
T+S + D +EK GG AV+DGGFAT+L+ HGA INDPLWSA LI PHLV +VHL+YLE+
Sbjct: 9 TSSLMTDFLEKCGGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLES 68
Query: 67 GADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKK------VPG 120
GA+I++T+SYQATI GF+++GLS+ EAE+LL +SV + EAR+ F++ K G
Sbjct: 69 GANIIITASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAG 128
Query: 121 HNYNRA-LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAF 179
R LVAAS+GSYGAYLADGSEYSG YG V E LKDFHRRR+Q+L +SG DL+AF
Sbjct: 129 KASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAF 188
Query: 180 ETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVG 239
ETIPNKLEA+A +LLEEE+I IP+W F+S DG + P G+S EC + + V A+G
Sbjct: 189 ETIPNKLEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSCKNVVAIG 248
Query: 240 INCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWR 299
INC P+++ LI +++T+K IVVYPNSGEV+DG KKW+ S+ + F S+ ++WR
Sbjct: 249 INCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDFVSYVSKWR 308
Query: 300 DSGAKLIGGCCRTTPSTIQAVSKVLKE 326
D+GA L GGCCRTTP+TI+A++KVL +
Sbjct: 309 DAGASLFGGCCRTTPNTIRAIAKVLSD 335
>sp|Q9M1W4|HMT2_ARATH Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana GN=HMT-2
PE=1 SV=1
Length = 333
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/330 (56%), Positives = 238/330 (72%), Gaps = 17/330 (5%)
Query: 9 SSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGA 68
+S+ D +++ GG AVIDGG AT+ E HGA +NDPLWSA L+ PHL+ VHL+YLEAGA
Sbjct: 7 NSMKDFLKQTGGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGA 66
Query: 69 DILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDA-----------VKK 117
DI+ ++SYQATI GF ++G S EE+ESLL+KSV +A EAR+ ++D +KK
Sbjct: 67 DIISSASYQATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKK 126
Query: 118 VPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLL 177
P LVAAS+GSYGAYLADGSEYSG YG + LEKLKDFHRRRLQVL ESG DL+
Sbjct: 127 RP------ILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLI 180
Query: 178 AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNA 237
AFETIPNK+EAQA +LLEE +++IP W F+S DG N SG+S KEC+ I KV A
Sbjct: 181 AFETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVA 240
Query: 238 VGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATR 297
VGINC PP+F+E L+ +++T K I+VYPNSGE +D K+W+ + +GD F S+ +
Sbjct: 241 VGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYDADRKEWVENTGVGDEDFVSYVEK 300
Query: 298 WRDSGAKLIGGCCRTTPSTIQAVSKVLKER 327
W D+G L+GGCCRTTP+TI+A+ K L R
Sbjct: 301 WMDAGVSLLGGCCRTTPTTIRAIHKRLVNR 330
>sp|Q9FUM8|HMT3_MAIZE Homocysteine S-methyltransferase 3 OS=Zea mays GN=HMT-3 PE=2 SV=1
Length = 338
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/312 (57%), Positives = 232/312 (74%)
Query: 15 IEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTS 74
++ AGG V+DGG AT+LE +GA +NDPLWSA L+ PHL+++VH++YLEAGA+I++T+
Sbjct: 17 VDAAGGRLVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITA 76
Query: 75 SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGS 134
SYQATI GF S+G S E++E+LL KSV +A+EAR+ F + + LVAA++GS
Sbjct: 77 SYQATIQGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTPIQHPILVAAALGS 136
Query: 135 YGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVEL 194
YGAYLADGSEYSG+YG E LKDFHRRRLQVL E+GPDL+AFETIPNKLEAQA VEL
Sbjct: 137 YGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVEL 196
Query: 195 LEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICY 254
LEE NI IPSW+ F+S DG + SG+S EC I +K KV AVGINC PP+F+ LI
Sbjct: 197 LEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCAKVGAVGINCTPPRFIHGLILS 256
Query: 255 FKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCRTTP 314
+++T K I++YPNSGE +DG K+W+ S + DG F S+ W GA LIGGCCRTTP
Sbjct: 257 IRKVTDKPILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAALIGGCCRTTP 316
Query: 315 STIQAVSKVLKE 326
+TI+A+ + L +
Sbjct: 317 NTIRAIHRTLNQ 328
>sp|Q9FUM9|HMT2_MAIZE Homocysteine S-methyltransferase 2 OS=Zea mays GN=HMT-2 PE=2 SV=1
Length = 339
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/312 (57%), Positives = 231/312 (74%)
Query: 15 IEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTS 74
++ AGG V+DGG AT+LE +GA +NDPLWSA L+ PHL+++VH++YLEAGA+I++T+
Sbjct: 17 VDAAGGRLVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITA 76
Query: 75 SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGS 134
SYQATI GF S+G S E++E+LL KSV +A+EAR+ F + + LVAAS+GS
Sbjct: 77 SYQATIQGFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTPIQHPVLVAASLGS 136
Query: 135 YGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVEL 194
YGAYLADGSEYSG+YG E LKDFHRRRLQVL E+GPDL+AFETIPNKLEA+A VEL
Sbjct: 137 YGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEAYVEL 196
Query: 195 LEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICY 254
LEE NI IP+W F+S DG + SG+S EC I +K KV AVGINC PP+F+ LI
Sbjct: 197 LEECNINIPAWFSFNSKDGVHIVSGDSLIECTTIADKCAKVGAVGINCTPPRFIHGLILS 256
Query: 255 FKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCRTTP 314
+++T K I++YPNSGE +DG K+W+ S + DG F S+ W GA LIGGCCRTTP
Sbjct: 257 IRKVTDKPILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAVLIGGCCRTTP 316
Query: 315 STIQAVSKVLKE 326
+TI+A+ + L +
Sbjct: 317 NTIRAIHRTLNK 328
>sp|Q4VNK0|SMTA_BRAOT Selenocysteine Se-methyltransferase OS=Brassica oleracea var.
italica GN=SMT PE=1 SV=1
Length = 346
Score = 362 bits (929), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/321 (56%), Positives = 232/321 (72%), Gaps = 3/321 (0%)
Query: 7 TASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEA 66
T S+ +L+++ GG A+IDGG AT+LE HGA +NDPLWSA L+ PHL+ VHL+YLEA
Sbjct: 10 TFYSMKELLKETGGYAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLIHTVHLDYLEA 69
Query: 67 GADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRA 126
GADI+ ++SYQATI GF ++G SIE++ESLL KSV +A EAR ++D K +
Sbjct: 70 GADIISSASYQATIQGFEAKGYSIEKSESLLRKSVEIACEARSTYYDKCKDDDDKKILKK 129
Query: 127 ---LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIP 183
LVAAS+GSYGA+LADGSEYSG YG + LE LKDFHRRR+QVL ESG D++AFETIP
Sbjct: 130 RPILVAASVGSYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESGADIIAFETIP 189
Query: 184 NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA 243
NKLEAQA ELL+E +IP W F+S DG N SG+S KEC+ I KV AVGINC
Sbjct: 190 NKLEAQAFAELLDEGVAKIPGWFSFNSKDGVNVVSGDSIKECIAIAEACEKVVAVGINCT 249
Query: 244 PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA 303
PP+F+E L+ ++T K I+VYPNSGE +D K+W+ + +G+ F S+ +W D+G
Sbjct: 250 PPRFIEGLVLEIAKVTSKPILVYPNSGERYDPERKEWVENTGVGNEDFVSYVEKWMDAGV 309
Query: 304 KLIGGCCRTTPSTIQAVSKVL 324
L+GGCCRTTP+TI+A+ K L
Sbjct: 310 SLLGGCCRTTPTTIRAIHKRL 330
>sp|P56707|SMTA_ASTBI Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA
PE=1 SV=1
Length = 338
Score = 357 bits (917), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 171/322 (53%), Positives = 226/322 (70%), Gaps = 8/322 (2%)
Query: 11 LDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADI 70
+ D + +AG AVI GG T+L+ HGA +NDPLWSA L+ PHL+++VHL+YLE GADI
Sbjct: 6 ITDFLHQAGRAAVIAGGLGTELQRHGADLNDPLWSAKCLLSCPHLIRQVHLDYLENGADI 65
Query: 71 LVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRA---- 126
++T+SYQATI GF ++G S EE E+LL +SV +A EARD ++ + N + +
Sbjct: 66 IITASYQATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILK 125
Query: 127 ----LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI 182
L+A S+GSYGAYLADGSE+SGNYG + E LKDFHRR++Q+L +SG DLLAFE +
Sbjct: 126 QRPILIAGSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSGVDLLAFEAV 185
Query: 183 PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242
PNKLEAQA +LLEEENI P+W F+S DG N SG+S +EC I KV AVGINC
Sbjct: 186 PNKLEAQAYADLLEEENIITPAWFAFTSKDGNNVVSGDSIEECGSIAESCDKVVAVGINC 245
Query: 243 APPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSG 302
PP+F+ +LI K++T K IV+YPNSGE +D K+W + + D F S+ +W +SG
Sbjct: 246 TPPRFIHDLILLLKKVTAKPIVIYPNSGETYDAIRKEWGQNSGVTDEDFVSYVDKWCESG 305
Query: 303 AKLIGGCCRTTPSTIQAVSKVL 324
A L+GGCCRTTP TI+ + K+L
Sbjct: 306 ASLVGGCCRTTPDTIRGIYKIL 327
>sp|Q9FUM7|HMT4_MAIZE Homocysteine S-methyltransferase 4 OS=Zea mays GN=HMT-4 PE=2 SV=1
Length = 342
Score = 355 bits (912), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/321 (53%), Positives = 224/321 (69%), Gaps = 1/321 (0%)
Query: 7 TASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEA 66
A +L + +AGGCAV+DGG T+LE HGA ++D LWSA L PHL+++VHL+YLEA
Sbjct: 10 AAGALRGFVREAGGCAVVDGGLGTELEAHGADLHDALWSAKCLASAPHLIRKVHLDYLEA 69
Query: 67 GADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRA 126
GAD+++++SYQATI GF SRG S +E+E LL +SV +A EAR F + A
Sbjct: 70 GADVIISASYQATIEGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPA 129
Query: 127 LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKL 186
LVAAS+GSYGAY ADGSEYSG+YG + E LK+FHRRRLQVL +GPDL+AFETIPNKL
Sbjct: 130 LVAASVGSYGAYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKL 189
Query: 187 EAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQ 246
EAQ ELLEE I+IP+W F+S DG NA SG+ EC + + +V+AVG+NC P+
Sbjct: 190 EAQVYAELLEENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSCPRVDAVGVNCTAPR 249
Query: 247 FVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSK-CLGDGKFESFATRWRDSGAKL 305
F+ LI K++T K IVVYPNSGE + +W+ S G F S WR +GA L
Sbjct: 250 FIHGLILSIKKVTSKPIVVYPNSGETYVAETNEWVDSDGATGTDDFVSRVGEWRRAGAAL 309
Query: 306 IGGCCRTTPSTIQAVSKVLKE 326
IGGCCRT+P+T++A+++ ++E
Sbjct: 310 IGGCCRTSPATVRAIARAVRE 330
>sp|O31463|HMT_BACSU Homocysteine S-methyltransferase YbgG OS=Bacillus subtilis (strain
168) GN=ybgG PE=4 SV=1
Length = 315
Score = 265 bits (677), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/299 (46%), Positives = 195/299 (65%), Gaps = 7/299 (2%)
Query: 23 VIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPG 82
V+DG AT+LE G ++ND LWSA L+++P L+K+VH +Y AGAD +T+SYQ+T G
Sbjct: 15 VLDGAMATELERKGCNLNDSLWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTFEG 74
Query: 83 FLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADG 142
F +RGLS EA L+E SV++A EARD+FW + N + ++AASIG YGAYLADG
Sbjct: 75 FAARGLSEAEARRLIELSVSIAAEARDEFWSLEEN--RLNRPKPIIAASIGPYGAYLADG 132
Query: 143 SEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQI 202
SEY GNY + ++L +FHR R++ L+E+G D+LA ETIP EA+A+V LL +E +
Sbjct: 133 SEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL-KEFPET 189
Query: 203 PSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKA 262
+WI FS+ DG + G +C +++ ++ A+GINC P Q + +LI K+ T K
Sbjct: 190 YAWISFSAKDGLHISDGTPAADCASWLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKP 249
Query: 263 IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCRTTPSTIQAVS 321
I+VYPNSGE +D K W + C + + A W + GA+LIGGCCRT P IQ ++
Sbjct: 250 IIVYPNSGEQYDPETKTWNGAACA--ESYGASARTWHEKGARLIGGCCRTKPENIQEIA 306
>sp|Q47690|MMUM_ECOLI Homocysteine S-methyltransferase OS=Escherichia coli (strain K12)
GN=mmuM PE=1 SV=2
Length = 310
Score = 219 bits (558), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 183/308 (59%), Gaps = 17/308 (5%)
Query: 23 VIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPG 82
++DG AT+LE G ++ D LWSA L++ P L++ VHL+Y AGA +T+SYQAT G
Sbjct: 18 LLDGAMATELEARGCNLADSLWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATPAG 77
Query: 83 FLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADG 142
F +RGL ++++L+ KSV LA +AR+ + + + P LVA S+G YGAYLADG
Sbjct: 78 FAARGLDEAQSKALIGKSVELARKAREAY---LAENP--QAGTLLVAGSVGPYGAYLADG 132
Query: 143 SEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQI 202
SEY G+Y V E + FHR R++ L+++G DLLA ET+PN E +AL ELL +
Sbjct: 133 SEYRGDYHCSV--EAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYP-RA 189
Query: 203 PSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKA 262
+W F+ D E+ G ++ + ++ +V A+GINC + + + LT
Sbjct: 190 RAWFSFTLRDSEHLSDGTPLRDVVALLAGYPQVVALGINCIALENTTAALQHLHGLTVLP 249
Query: 263 IVVYPNSGEVWDGRAKKWLPS--KCLGDGKFESFATRWRDSGAKLIGGCCRTTPSTIQAV 320
+VVYPNSGE +D +K W C + + +W+ +GA+LIGGCCRTTP+ I A
Sbjct: 250 LVVYPNSGEHYDAVSKTWHHHGEHC---AQLADYLPQWQAAGARLIGGCCRTTPADIAA- 305
Query: 321 SKVLKERS 328
LK RS
Sbjct: 306 ---LKARS 310
>sp|Q12525|MHT1_YEAST Homocysteine S-methyltransferase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MHT1 PE=1 SV=1
Length = 324
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 168/336 (50%), Gaps = 42/336 (12%)
Query: 14 LIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLI---------KQPHLVKRVHLEYL 64
++E G ++DGG T+LE G +IN P+WSA ++ +V+ ++ +++
Sbjct: 10 IVEHPGKVLILDGGQGTELENRGININSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFM 69
Query: 65 EAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYN 124
AGA+IL+T +YQA +S+ E + + A +F D + ++
Sbjct: 70 IAGANILMTITYQANF-------------QSISENTSIKTLAAYKRFLDKIV-----SFT 111
Query: 125 RALVAAS---IGSYGAYLADGS-EYSGNYGPGVDLEKLKDFHRRRLQVLVESGP-DLLAF 179
R + IGS G + A S EY+G+YGP + F + +L+ ++ DL+ F
Sbjct: 112 REFIGEERYLIGSIGPWAAHVSCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGF 171
Query: 180 ETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKEC-LDIINKSGKVNA- 237
ETIPN E +A++ +E+ I P +I S D G + +E + I K+N
Sbjct: 172 ETIPNFHELKAILS-WDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKN 230
Query: 238 ---VGINCAP-PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKW-LPSKCLGDGKFE 292
+G+NC Q L + L ++VYPNSGE+++ + K W P+ L D +E
Sbjct: 231 LLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKLDD--WE 288
Query: 293 SFATRWRDSGAKLIGGCCRTTPSTIQAVSKVLKERS 328
+ ++ D+GA++IGGCCRT+P I ++ + + S
Sbjct: 289 TTVKKFVDNGARIIGGCCRTSPKDIAEIASAVDKYS 324
>sp|Q08985|SAM4_YEAST Homocysteine S-methyltransferase 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAM4 PE=1 SV=1
Length = 325
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 163/333 (48%), Gaps = 53/333 (15%)
Query: 23 VIDGGFATQLETHGASINDPLWSALYLIKQPH----------LVKRVHLEYLEAGADILV 72
V+DGG T+LE G + +P+WS + I + +VK + ++L AGA+IL+
Sbjct: 19 VLDGGQGTELENRGIKVANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAGAEILM 78
Query: 73 TSSYQATIPGFLSRG--LSIEEAESLLEKSVTLAVE--ARDKFWDAVKKVPGHNYNRALV 128
T++YQ + ++ E +LL + V + DK+ +
Sbjct: 79 TTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKY----------------L 122
Query: 129 AASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGP-DLLAFETIPNKLE 187
IG +GA++ E++G+YG + + + +L+ ++ DL+ FETIPN E
Sbjct: 123 IGCIGPWGAHIC--REFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHE 180
Query: 188 AQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSG-KVNA----VGINC 242
+A++ +E + P +I S + G + +E +I G K+N +GINC
Sbjct: 181 LKAILSW-DESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINC 239
Query: 243 AP----PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFAT-- 296
P +E+L + L A++ YPNSGEV+D K WLP+ K S+ T
Sbjct: 240 VSFNQSPDILESL---HQALPNMALLAYPNSGEVYDTEKKIWLPNS----DKLNSWDTVV 292
Query: 297 -RWRDSGAKLIGGCCRTTPSTIQAVSKVLKERS 328
++ SGA++IGGCCRT+P IQ +S +K+ +
Sbjct: 293 KQYISSGARIIGGCCRTSPKDIQEISAAVKKYT 325
>sp|Q9AJQ8|METH_VIBFI Methionine synthase OS=Vibrio fischeri GN=metH PE=3 SV=1
Length = 1226
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 60/336 (17%)
Query: 23 VIDGGFATQLETH--------GASINDPLW-------SALYLIKQPHLVKRVHLEYLEAG 67
+IDGG T ++ + G N W + L ++ QP +++ +H YLEAG
Sbjct: 20 LIDGGMGTMIQGYKFEEKDYRGGRFNQ--WHCDLKGNNDLLVLSQPQIIRDIHEAYLEAG 77
Query: 68 ADILVTSSYQATIPGFLSRGLSIEEAESLLE----KSVTLAVEARDKFWDAVKKVPGHNY 123
ADIL T+++ AT + ++ + ESL E ++ LA E DK+ + P +
Sbjct: 78 ADILETNTFNAT-----TIAMADYDMESLSEEINFEAAKLAREVADKWTEKTPNKPRY-- 130
Query: 124 NRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIP 183
VA +G + + + V ++L + + + L+ G DL+ ETI
Sbjct: 131 ----VAGVLGPTNRTCSISPDVNDPGFRNVSFDELVEAYSESTRALIRGGSDLILIETIF 186
Query: 184 NKLEAQ----ALVELLEEENIQIPSWICFSSVDGE----NAPSGESFKECLDIINKSGKV 235
+ L A+ A+ + EE I +P I + D + + E+F L + K
Sbjct: 187 DTLNAKACSFAVESVFEELGITLPVMISGTITDASGRTLSGQTTEAFYNAL----RHVKP 242
Query: 236 NAVGINCA-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKC----LGDGK 290
+ G+NCA P + + +++ + +PN+G LP+ L
Sbjct: 243 ISFGLNCALGPDELREYVSELSRISECYVSAHPNAG----------LPNAFGEYDLSPED 292
Query: 291 FESFATRWRDSG-AKLIGGCCRTTPSTIQAVSKVLK 325
W SG LIGGCC TTP I+ ++ V++
Sbjct: 293 MAEHVAEWASSGFLNLIGGCCGTTPEHIRQMALVVE 328
>sp|Q5E814|METH_VIBF1 Methionine synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114)
GN=metH PE=3 SV=1
Length = 1226
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 145/336 (43%), Gaps = 60/336 (17%)
Query: 23 VIDGGFATQLETH--------GASINDPLW-------SALYLIKQPHLVKRVHLEYLEAG 67
+IDGG T ++ + G N W + L ++ QP +++ +H YLEAG
Sbjct: 20 LIDGGMGTMIQGYKFEEEDYRGERFNK--WHCDLKGNNDLLVLSQPQIIRDIHEAYLEAG 77
Query: 68 ADILVTSSYQATIPGFLSRGLSIEEAESLLE----KSVTLAVEARDKFWDAVKKVPGHNY 123
ADIL T+++ AT + ++ + ESL E ++ LA E DK+ + P +
Sbjct: 78 ADILETNTFNAT-----TIAMADYDMESLSEEINFEAAKLAREVADKWTEKTPNKPRY-- 130
Query: 124 NRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIP 183
VA +G + + + V ++L + + + L+ G DL+ ETI
Sbjct: 131 ----VAGVLGPTNRTCSISPDVNDPGFRNVSFDELVEAYSESTRALIRGGSDLILIETIF 186
Query: 184 NKLEAQ----ALVELLEEENIQIPSWICFSSVDGE----NAPSGESFKECLDIINKSGKV 235
+ L A+ A+ + EE +I +P I + D + + E+F L + K
Sbjct: 187 DTLNAKACSFAVESVFEELDITLPVMISGTITDASGRTLSGQTTEAFYNAL----RHVKP 242
Query: 236 NAVGINCA-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKC----LGDGK 290
+ G+NCA P + + +++ + +PN+G LP+ L
Sbjct: 243 ISFGLNCALGPDELREYVSDLSRISECYVSAHPNAG----------LPNAFGEYDLSPED 292
Query: 291 FESFATRWRDSG-AKLIGGCCRTTPSTIQAVSKVLK 325
W SG LIGGCC TTP I+ ++ V++
Sbjct: 293 MAEHVAEWASSGFLNLIGGCCGTTPEHIRQMALVVE 328
>sp|O06745|YITJ_BACSU Bifunctional homocysteine
S-methyltransferase/5,10-methylenetetrahydrofolate
reductase OS=Bacillus subtilis (strain 168) GN=yitJ PE=2
SV=1
Length = 612
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 46/306 (15%)
Query: 25 DGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFL 84
DG T L ++G D + L I +P ++R+H Y+EAGA+I+ T++Y A
Sbjct: 15 DGAMGTLLYSYGI---DRCFEELN-ISKPEEIQRIHKAYVEAGANIIQTNTYGANYIKLS 70
Query: 85 SRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSE 144
GL ++ + + +++V +A R DA V ++G + + +
Sbjct: 71 RHGLE-DDIKKMNQEAVKIA---RASAGDAY------------VLGTMGGIRTF--NKNA 112
Query: 145 YSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPS 204
YS L+++K R +L +L+ PD L ET + EA+ ++++ +E +P
Sbjct: 113 YS--------LDEIKRSFREQLYLLLHEEPDGLLLETYYDLEEAREVLKIARKET-DLPI 163
Query: 205 WICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC--APPQFVENL--ICYFKELTK 260
+ S + G + L I G + VGINC P +E L + F ++
Sbjct: 164 MLNVSMHEQGVLQDGTPLSDALRSIADLG-ADIVGINCRLGPYHMIEALSEVPIFDDVF- 221
Query: 261 KAIVVYPNSG--EVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCRTTPSTIQ 318
+ VYPNS + +GR D F++ A+ +R GA++IGGCC TTP+ I+
Sbjct: 222 --LSVYPNSSLPSLEEGRLVYET-----DDTYFQNSASEFRKQGARIIGGCCGTTPNHIR 274
Query: 319 AVSKVL 324
A+++ +
Sbjct: 275 AMAEAV 280
>sp|Q87L95|METH_VIBPA Methionine synthase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=metH PE=3 SV=1
Length = 1226
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 56/334 (16%)
Query: 23 VIDGGFATQLETHGASIND------PLW-------SALYLIKQPHLVKRVHLEYLEAGAD 69
+IDGG T ++ + D W + L ++ QP L+K +H YLEAGAD
Sbjct: 19 LIDGGMGTMIQGYKLEEQDYRGERFANWHCDLKGNNDLLVLSQPQLIKEIHSAYLEAGAD 78
Query: 70 ILVTSSYQATIPGFLSRGLSIEEAESLLEK----SVTLAVEARDKFWDAVKKVPGHNYNR 125
IL T+++ AT + ++ E ESL E+ + LA E D++ P +
Sbjct: 79 ILETNTFNAT-----TIAMADYEMESLSEEINFAAAKLAREVADEWTAKTPDKPRY---- 129
Query: 126 ALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNK 185
VA +G + + + V ++L + + + L+ G DL+ ETI +
Sbjct: 130 --VAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEAYSESTRALIRGGADLILIETIFDT 187
Query: 186 LEAQALV----ELLEEENIQIPSWICFSSVDGE----NAPSGESFKECLDIINKSGKVNA 237
L A+A + EE + +P I + D + + E+F L + + +
Sbjct: 188 LNAKACAFAVDSVFEELGVALPVMISGTITDASGRTLSGQTTEAFYNSL----RHVRPLS 243
Query: 238 VGINCA-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKC----LGDGKFE 292
G+NCA P + + +++ + +PN+G LP+ L
Sbjct: 244 FGLNCALGPDELRPYVEELSRISESFVSAHPNAG----------LPNAFGEYDLSPEDMA 293
Query: 293 SFATRWRDSG-AKLIGGCCRTTPSTIQAVSKVLK 325
W SG LIGGCC TTP I+ +++ ++
Sbjct: 294 EHVKEWASSGFLNLIGGCCGTTPEHIRQMAQAVE 327
>sp|Q09582|METH_CAEEL Probable methionine synthase OS=Caenorhabditis elegans GN=nos-1
PE=1 SV=1
Length = 1249
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 151/354 (42%), Gaps = 61/354 (17%)
Query: 6 TTASSLDDLIEKAG-GCAVIDGGFATQLET--------HGASIND---PLW--SALYLIK 51
T +S ++L E A +IDG T ++ G + D PL + L I
Sbjct: 2 TRSSLFEELAEIAKERIMIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSIT 61
Query: 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSV-----TLAVE 106
+P ++ ++H YLEAGAD + T+++ G +I +A+ E V A+
Sbjct: 62 RPDIIYKIHKLYLEAGADFVETNTFS---------GTTIAQADYRCEHLVHEINYQSALV 112
Query: 107 ARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRL 166
AR + D V G R V +IG L+ V ++L + +
Sbjct: 113 AR-RACDDVGAATGR---RRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQA 168
Query: 167 QVLVESGPDLLAFETIPNKLEAQ----ALVELLEEENI-QIPSWICFSSVDGENAPSGES 221
+ L++ G D+L ET+ + A+ A+ L E+E + ++P ++ + VD
Sbjct: 169 RSLIQGGVDVLLVETVFDSANAKAALFAIRTLFEDEGVPEMPVFLSGTIVDMSGRTLSGQ 228
Query: 222 FKECLDIINKSGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGR 276
E + K GK AVG+NCA QFV+N+ + + I+ YPN+G
Sbjct: 229 TGEAFLVSTKQGKPMAVGLNCALGAKDMRQFVDNM----SKWSDSFIICYPNAG------ 278
Query: 277 AKKWLPSKCLG-DGKFESFATRW----RDSGAKLIGGCCRTTPSTIQAVSKVLK 325
LP+ G D E A RD +IGGCC TTP I A+ K ++
Sbjct: 279 ----LPNALGGYDETPEEMADVLREFARDGLVNIIGGCCGTTPDHINAMYKAVQ 328
>sp|Q9KUW9|METH_VIBCH Methionine synthase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=metH PE=3 SV=1
Length = 1226
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 140/329 (42%), Gaps = 46/329 (13%)
Query: 23 VIDGGFATQLETH--------GASINDPLW-------SALYLIKQPHLVKRVHLEYLEAG 67
+IDGG T ++++ GA D W + L ++ QP ++K +H YLEAG
Sbjct: 19 LIDGGMGTMIQSYKLQEEDYRGARFVD--WHCDLKGNNDLLVLTQPQIIKEIHSAYLEAG 76
Query: 68 ADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRAL 127
ADIL T+++ +T + AE + LA E D+ W A K P
Sbjct: 77 ADILETNTFNSTTIAMADYDMQSLSAEINF-AAAKLAREVADE-WTA--KDPSRP---RY 129
Query: 128 VAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLE 187
VA +G + + + V + L + + + L++ G DL+ ETI + L
Sbjct: 130 VAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTLN 189
Query: 188 AQALV----ELLEEENIQIPSWICFSSVDGENAP-SGESFKECLDIINKSGKVNAVGINC 242
A+A + EE I +P I + D SG++ + + + + + G+NC
Sbjct: 190 AKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPI-SFGLNC 248
Query: 243 A-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKC----LGDGKFESFATR 297
A P + + +++ + +PN+G LP+ L +
Sbjct: 249 ALGPDELRQYVEELSRISECYVSAHPNAG----------LPNAFGEYDLSAEEMAEHIAE 298
Query: 298 WRDSG-AKLIGGCCRTTPSTIQAVSKVLK 325
W +G L+GGCC TTP I A++K ++
Sbjct: 299 WAQAGFLNLVGGCCGTTPEHIAAIAKAVE 327
>sp|A8XY95|METH_CAEBR Probable methionine synthase OS=Caenorhabditis briggsae GN=nos-1
PE=3 SV=2
Length = 1273
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 144/336 (42%), Gaps = 60/336 (17%)
Query: 23 VIDGGFATQ-----LETH---GASIND---PLW--SALYLIKQPHLVKRVHLEYLEAGAD 69
+IDG T +E H G + D PL + L I +P ++ ++H YLEAGAD
Sbjct: 20 IIDGAMGTMIQREYMEEHDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEAGAD 79
Query: 70 ILVTSSYQATIPGFLSRGLSIEEAESLLEKSV-----TLAVEARDKFWDAVKKVPGHNYN 124
+ T+++ T +I +A+ E V A+ AR + D V G
Sbjct: 80 FIETNTFSGT---------TIAQADYHCEHLVHEINYQSALVAR-RACDDVGAATGI--- 126
Query: 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPN 184
R V +IG L+ V ++L + + + L++ G D+L ET+ +
Sbjct: 127 RRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLLVETVFD 186
Query: 185 KLEAQ----ALVELLEEENI-QIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVG 239
A+ A+ L E+E + +IP ++ + VD E + K GK AVG
Sbjct: 187 SANAKAALFAIRTLFEDEGVPEIPVFLSGTIVDMSGRTLSGQTGEAFLVSTKQGKPIAVG 246
Query: 240 INCA-----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLG-DGKFES 293
+NCA QFV+N+ + L I+ YPN+G LP+ G D E
Sbjct: 247 LNCALGAKDMRQFVQNMSLWSDTL----ILCYPNAG----------LPNALGGYDETPEE 292
Query: 294 FATRWR----DSGAKLIGGCCRTTPSTIQAVSKVLK 325
A R D +IGGCC TTP I A+ K ++
Sbjct: 293 MAEVLREFAQDGLVNIIGGCCGTTPDHINAMYKAVQ 328
>sp|Q5XGM3|BHMT1_XENLA Betaine--homocysteine S-methyltransferase 1 OS=Xenopus laevis
GN=bhmt PE=2 SV=1
Length = 403
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 136/331 (41%), Gaps = 49/331 (14%)
Query: 14 LIEK--AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADIL 71
L+E+ AG + DGGF LE G P W+ ++ P V+++H E+L AGA+++
Sbjct: 10 LLERLDAGEVVIGDGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVM 68
Query: 72 VTSSYQATIPGFLSRGLSIEE---AESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALV 128
T ++ A+ +RG + E + + E + +A E N ALV
Sbjct: 69 QTFTFYASDDKLENRGNYVAEKISGQKVNEVACDIAREVA-------------NEGDALV 115
Query: 129 AASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEA 188
A + +YL+ SE ++K R++L V ++ D L E + EA
Sbjct: 116 AGGVSQTPSYLSCKSEV-----------EVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEA 164
Query: 189 QALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA-PPQF 247
VE+L+E + + +C E +G S EC + K+G + VG+NC P
Sbjct: 165 VWAVEVLKESGKPVAATLCIGP---EGDLNGVSPGECAVRLAKAG-ASVVGVNCHFDPMT 220
Query: 248 VENLICYFKE-----LTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW---- 298
+ KE K ++ P + D + ++ TRW
Sbjct: 221 CVATVKLMKEGLVAAKVKAHLMTQPLAYHTPDCGKQGFIDLPEFPFALEPRIVTRWDIHK 280
Query: 299 -----RDSGAKLIGGCCRTTPSTIQAVSKVL 324
D G + IGGCC P +A+++ L
Sbjct: 281 YARAAYDLGVRYIGGCCGFEPYHTRAIAEEL 311
>sp|Q4JIJ3|METH_BOVIN Methionine synthase OS=Bos taurus GN=MTR PE=2 SV=1
Length = 1265
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 59/335 (17%)
Query: 23 VIDGGFATQLETHGASIND-----------PLW--SALYLIKQPHLVKRVHLEYLEAGAD 69
V+DGG T ++ H S D PL + + I QP+++ ++H EYL AGAD
Sbjct: 32 VLDGGMGTMIQRHKLSEEDFRGQEFKDHARPLKGNNDILSITQPNVIYQIHKEYLLAGAD 91
Query: 70 ILVTSSYQATIPGFLSRGLSIEEAESLLEK-SVTLAVEARDKFWDAVKKVPGHNYNRALV 128
I+ T+++ +T SI +A+ LE + + + + A + + + V
Sbjct: 92 IIETNTFSST---------SIAQADYGLEHLAYRMNMCSAGVARKAAEDISLQTGIKRYV 142
Query: 129 AASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEA 188
A ++G L+ + ++L + ++ + + L++ G D+L ETI + A
Sbjct: 143 AGALGPTNKTLSVSPSVERPDYRNITFDELVEAYKEQAKGLLDGGVDILLIETIFDTANA 202
Query: 189 QALV----ELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA- 243
+A + +L EEE + P +I + VD E I +G+NCA
Sbjct: 203 KAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFVISVSHADPLCIGLNCAL 262
Query: 244 ----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGD---------GK 290
F+E + + T ++ YPN+G LP+ GD
Sbjct: 263 GAAEMRPFIETI----GKCTTAYVLCYPNAG----------LPN-TFGDYDETPHVMAMH 307
Query: 291 FESFATRWRDSGAKLIGGCCRTTPSTIQAVSKVLK 325
+ FA D ++GGCC TTP I+ +++ +K
Sbjct: 308 LKDFAV---DGLVNIVGGCCGTTPDHIREIAEAVK 339
>sp|P87138|YDM7_SCHPO Uncharacterized protein C57A7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC57A7.07c PE=4 SV=2
Length = 308
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 132/314 (42%), Gaps = 45/314 (14%)
Query: 23 VIDGGFATQLETHGASINDP-LWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ--AT 79
++DGG L SI++ LW++ L++ P +V + H E+L+ DI+ T +YQ A+
Sbjct: 3 MLDGGSTAILPKLPESISESRLWTSEALVRYPEIVVKHHEEFLKV-CDIISTFTYQLDAS 61
Query: 80 IPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYL 139
I G+ +++ + S+ L V AR+ +A +GS+ A +
Sbjct: 62 IYDEKVEGVPLKQVYA---NSIGLPVYAREHL----------GLPNKYIALCLGSHAATI 108
Query: 140 ADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGP------DLLAFETIPNKLEAQALVE 193
EY Y D E L +FH+ R++ + S P D +AFE++P+ EA+ + +
Sbjct: 109 PGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVTEAEVVCQ 168
Query: 194 LLEE-ENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLI 252
L+++ + WI + + S + IN + +G+NC +E +
Sbjct: 169 LIQDMKGWSKRCWITCTCPERSTIERVSSIISKILSINHDS-IWGIGVNCFHLSLLEPIA 227
Query: 253 CYFKELTKKAI--VVYPNSGEVWDGRAKKWLPSKCLGDGKFESFAT---RWRDSGAK--- 304
L I ++YP DGR P G + A W AK
Sbjct: 228 KMLSSLLPSNITAILYP------DGRGLYQNPDGTFSPGSTDHPAPSPEEWSTITAKYSN 281
Query: 305 ------LIGGCCRT 312
++GGCC T
Sbjct: 282 LHNGNLILGGCCET 295
>sp|Q32LQ4|BHMT1_DANRE Betaine--homocysteine S-methyltransferase 1 OS=Danio rerio GN=bhmt
PE=2 SV=1
Length = 400
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 45/323 (13%)
Query: 18 AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ 77
AG + DGGF LE G P W+ + P V+++H E+L AG++++ T ++
Sbjct: 16 AGEVVIGDGGFVFALEKRGYVKAGP-WTPEAAAEHPEAVRQLHREFLRAGSNVMQTFTFY 74
Query: 78 ATIPGFLSRGLSIE-EAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYG 136
A+ +RG + + + E + LA E N ALVA +
Sbjct: 75 ASDDKLENRGNKLSFTGQQINEAACDLAREVA-------------NEGDALVAGGVSQTP 121
Query: 137 AYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLE 196
+YL+ SE E++K +++L V ++ DLL E + EA+ V++L+
Sbjct: 122 SYLSCKSE-----------EEVKKTFKKQLDVFIKKNVDLLIAEYFEHVEEAEWAVQVLK 170
Query: 197 EENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA-PPQFVENLICYF 255
+ + +C DG+ G EC + K+G + VG+NC P +
Sbjct: 171 ATGKPVAATLCIGP-DGDM--HGVIPGECAVRLVKAG-ADIVGVNCHFDPLTCVKTVAMM 226
Query: 256 KELTKKA-----IVVYPNSGEVWDGRAKKW---------LPSKCLGDGKFESFATRWRDS 301
K +KA + P + D + + L + L + + +A +
Sbjct: 227 KAAVEKAGLKAHYMTQPLAYHTPDCSCQGFIDLPEFPFALEPRILTRWEMQQYAREAYKA 286
Query: 302 GAKLIGGCCRTTPSTIQAVSKVL 324
G + IGGCC P I+AV++ L
Sbjct: 287 GIRYIGGCCGFEPYHIRAVAEEL 309
>sp|Q04898|YM99_YEAST Putative uncharacterized protein YMR321C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR321C PE=4
SV=1
Length = 105
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
Query: 238 VGINCAP----PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFES 293
+GINC P +E+L + L A++ YPNSGEV+D K WLP+ K S
Sbjct: 15 LGINCVSFNQSPDILESL---HQALPNMALLAYPNSGEVYDTEKKIWLPNS----DKLNS 67
Query: 294 FAT---RWRDSGAKLIGGCCRTTPSTIQAVSKVLKERS 328
+ T ++ SGA++IGGCCRT+P IQ +S +K+ +
Sbjct: 68 WDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKYT 105
>sp|O35490|BHMT1_MOUSE Betaine--homocysteine S-methyltransferase 1 OS=Mus musculus GN=Bhmt
PE=2 SV=1
Length = 407
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 49/326 (15%)
Query: 18 AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ 77
AG + DGGF LE G P W+ ++ P V+++H E+L AG++++ T ++
Sbjct: 19 AGEVVIGDGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 78 ATIPGFLSRGLSIEE---AESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGS 134
A+ +RG + E + + E + +A + D+ ALVA +
Sbjct: 78 ASEDKLENRGNYVAEKISGQKVNEAACDIARQVADE-------------GDALVAGGVSQ 124
Query: 135 YGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVEL 194
+YL+ SE ++K R++L+V ++ D L E + EA VE
Sbjct: 125 TPSYLSCKSEV-----------EVKKIFRQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEA 173
Query: 195 LEEENIQIPSWICFSSV-DGENAPSGESFKECLDIINKSGKVNAVGINCA-PPQFVENLI 252
L+ + + +C D P G EC + K+G + VG+NC P +
Sbjct: 174 LKASGKPVAATMCIGPEGDLHGVPPG----ECAVRLVKAG-ASIVGVNCHFDPSVSLQTV 228
Query: 253 CYFKE-----LTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW------RDS 301
KE K ++ P + D + ++ G ATRW R++
Sbjct: 229 KLMKEGLEAARLKAYLMSQPLAYHTPDCGKQGFIDLPEFPFGLEPRVATRWDIQKYAREA 288
Query: 302 ---GAKLIGGCCRTTPSTIQAVSKVL 324
G + IGGCC P I+A+++ L
Sbjct: 289 YNLGVRYIGGCCGFEPYHIRAIAEEL 314
>sp|O33465|METH_PSEPU Methionine synthase (Fragment) OS=Pseudomonas putida GN=metH PE=3
SV=1
Length = 607
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 54/332 (16%)
Query: 23 VIDGGFATQLETH--------GASINDPLWSA-------LYLIKQPHLVKRVHLEYLEAG 67
++DGG T ++++ G D W + L L+ +P ++ + YL+AG
Sbjct: 21 ILDGGMGTMIQSYRLEEHDYRGTRFAD--WPSDVKGNNDLLLLSRPDVIAAIEKAYLDAG 78
Query: 68 ADILVTSSYQATIPGFLSRGLSIEEAESLL-EKSVTLAVEARDKFWDAVKKVPGHNYNRA 126
ADIL T+++ AT G+ ESL+ E +V A AR + DA K + + R
Sbjct: 79 ADILETNTFNATQISQADYGM-----ESLVYELNVEGARIAR-QVADA-KTLETPDKPR- 130
Query: 127 LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKL 186
VA +G + + + V ++L + + + L+E G DL+ ETI + L
Sbjct: 131 FVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVENYIEATRGLIEGGADLILIETIFDTL 190
Query: 187 EAQALV----ELLEEENIQIPSWICFSSVDGENAP-SGESFKECLDIINKSGKVNAVGIN 241
A+A + ++ EE+ +++P I + D SG++ + + + + K +VG+N
Sbjct: 191 NAKAAIFAVQQVFEEDAVELPIMISGTITDASGRTLSGQTTEAFWNSV-RHAKPISVGLN 249
Query: 242 CAPPQFVENLICYFKELTKKA---IVVYPNSGEVWDGRAKKWLPSKCLGD-----GKFES 293
CA ++L Y +EL+ KA + +PN+G LP+ G+ + +
Sbjct: 250 CALG--AKDLRPYLEELSTKADTHVSAHPNAG----------LPN-AFGEYDETPAEMAA 296
Query: 294 FATRWRDSG-AKLIGGCCRTTPSTIQAVSKVL 324
+ SG +IGGC TTP IQA+++ +
Sbjct: 297 VVEEFAASGFLNIIGGCSGTTPGHIQAIAEAV 328
>sp|Q5M8Z0|BHMT1_XENTR Betaine--homocysteine S-methyltransferase 1 OS=Xenopus tropicalis
GN=bhmt PE=2 SV=1
Length = 403
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 43/328 (13%)
Query: 14 LIEK--AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADIL 71
L+E+ AG + DGGF LE G P W+ ++ P V+++H E+L AGA+++
Sbjct: 10 LLERLDAGEVVIGDGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVM 68
Query: 72 VTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131
T ++ A+ +RG + A+ + + V A D ++V N ALVA
Sbjct: 69 QTFTFYASDDKLENRGNYV--AKKISGQKVNEAA------CDIAREVA--NEGDALVAGG 118
Query: 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQAL 191
+ +YL+ SE ++K R++L V ++ D L E + EA
Sbjct: 119 VSQTPSYLSCKSEV-----------EVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWA 167
Query: 192 VELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA-PPQFVEN 250
VE+L+E + + +C N G + EC + K+G + VG+NC P
Sbjct: 168 VEVLKESGKPVAATLCIGPQGDLN---GVTPGECAVRLAKAG-ASVVGVNCHFDPMTCIA 223
Query: 251 LICYFKE-----LTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW------R 299
+ KE K ++ P + D + ++ TRW R
Sbjct: 224 TVKLMKEGLVAAKVKAHLMTQPLAYHTPDCGKQGFIDLPEFPFALEPRIVTRWDIHKYAR 283
Query: 300 DS---GAKLIGGCCRTTPSTIQAVSKVL 324
++ G + IGGCC P +A+++ L
Sbjct: 284 EAYNLGVRYIGGCCGFEPYHTRAIAEEL 311
>sp|Q7MHB1|METH_VIBVY Methionine synthase OS=Vibrio vulnificus (strain YJ016) GN=metH
PE=3 SV=1
Length = 1226
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 138/336 (41%), Gaps = 54/336 (16%)
Query: 23 VIDGGFATQLETHGASIND------PLWSA-------LYLIKQPHLVKRVHLEYLEAGAD 69
+IDGG T ++ + D W + L ++ QP L+K +H YLEAGAD
Sbjct: 19 LIDGGMGTMIQGYKLQEQDYRGERFADWHSDLKGNNDLLVLTQPQLIKEIHHAYLEAGAD 78
Query: 70 ILVTSSYQATIPGFLSRGLSIEEAESLLEK---SVTLAVEARDKFWDAVKKVPGHNYNRA 126
IL T+++ AT + ++ + ESL E+ + W A K P
Sbjct: 79 ILETNTFNAT-----TIAMADYDMESLSEEINFAAAKLAREAADEWTA--KNPA---KPR 128
Query: 127 LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKL 186
VA +G + + + V ++L + + + L+ G DL+ ETI + L
Sbjct: 129 YVAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEAYSESTRALIRGGSDLILIETIFDTL 188
Query: 187 EAQ----ALVELLEEENIQIPSWICFSSVDGE----NAPSGESFKECLDIINKSGKVNAV 238
A+ A+ + EE +P I + D + + E+F L + + +
Sbjct: 189 NAKACAFAVESVFEELGFALPVMISGTITDASGRTLSGQTTEAFYNSL----RHVRPISF 244
Query: 239 GINCA-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKC----LGDGKFES 293
G+NCA P + + +++ + +PN+G LP+ L +
Sbjct: 245 GLNCALGPDELRPYVEELSRISETFVSTHPNAG----------LPNAFGEYDLSPEEMAE 294
Query: 294 FATRWRDSG-AKLIGGCCRTTPSTIQAVSKVLKERS 328
W SG LIGGCC TTP I+ ++ ++ S
Sbjct: 295 HVKEWAQSGFLNLIGGCCGTTPEHIRHMAMAVEGES 330
>sp|Q99707|METH_HUMAN Methionine synthase OS=Homo sapiens GN=MTR PE=1 SV=2
Length = 1265
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 150/346 (43%), Gaps = 41/346 (11%)
Query: 2 GKENTTASSLDDLIEKAGGCAVIDGGFATQL------ETH--GASIND---PLW--SALY 48
G + T ++ +++K V+DGG T + E H G D PL + +
Sbjct: 13 GLKKTLRDEINAILQKR--IMVLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDIL 70
Query: 49 LIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEK-SVTLAVEA 107
I QP ++ ++H EYL AGADI+ T+++ +T SI +A+ LE + + + +
Sbjct: 71 SITQPDVIYQIHKEYLLAGADIIETNTFSST---------SIAQADYGLEHLAYRMNMCS 121
Query: 108 RDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQ 167
A ++V + VA ++G L+ + ++L + ++ + +
Sbjct: 122 AGVARKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYQEQAK 181
Query: 168 VLVESGPDLLAFETIPNKLEAQ----ALVELLEEENIQIPSWICFSSVDGENAPSGESFK 223
L++ G D+L ETI + A+ AL L EE+ P +I + VD
Sbjct: 182 GLLDGGVDILLIETIFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTLSGQTG 241
Query: 224 ECLDIINKSGKVNAVGINCA-PPQFVENLICYFKELTKKAIVVYPNSG---EVWDGRAKK 279
E I G+ +G+NCA + I + T ++ YPN+G D
Sbjct: 242 EGFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGKCTTAYVLCYPNAGLPNTFGDYDETP 301
Query: 280 WLPSKCLGDGKFESFATRWRDSGAKLIGGCCRTTPSTIQAVSKVLK 325
+ +K L D FA D ++GGCC +TP I+ +++ +K
Sbjct: 302 SMMAKHLKD-----FAM---DGLVNIVGGCCGSTPDHIREIAEAVK 339
>sp|Q8DCJ7|METH_VIBVU Methionine synthase OS=Vibrio vulnificus (strain CMCP6) GN=metH
PE=3 SV=1
Length = 1226
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 56/334 (16%)
Query: 23 VIDGGFATQLETHGASIND------PLWSA-------LYLIKQPHLVKRVHLEYLEAGAD 69
+IDGG T ++ + D W + L ++ QP L+K +H YLEAGAD
Sbjct: 19 LIDGGMGTMIQGYKLQEQDYRGERFADWHSDLKGNNDLLVLTQPQLIKEIHHAYLEAGAD 78
Query: 70 ILVTSSYQATIPGFLSRGLSIEEAESLLEK----SVTLAVEARDKFWDAVKKVPGHNYNR 125
IL T+++ AT + ++ + ESL E+ + LA EA D++ P +
Sbjct: 79 ILETNTFNAT-----TIAMADYDMESLSEEINFAAARLAREAADEWTAQNPAKPRY---- 129
Query: 126 ALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNK 185
VA +G + + + V ++L + + + L+ G DL+ ETI +
Sbjct: 130 --VAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEAYSESTRALIRGGSDLILIETIFDT 187
Query: 186 LEAQALV----ELLEEENIQIPSWICFSSVDGE----NAPSGESFKECLDIINKSGKVNA 237
L A+A + EE +P I + D + + E+F L + + +
Sbjct: 188 LNAKACAFAVDSVFEELGFALPVMISGTITDASGRTLSGQTTEAFYNSL----RHVRPIS 243
Query: 238 VGINCA-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKC----LGDGKFE 292
G+NCA P + + +++ + +PN+G LP+ L +
Sbjct: 244 FGLNCALGPDELRPYVEELSRISETFVSTHPNAG----------LPNAFGEYDLSPEEMA 293
Query: 293 SFATRWRDSG-AKLIGGCCRTTPSTIQAVSKVLK 325
W SG LIGGCC TTP I+ ++ ++
Sbjct: 294 EHVKEWAQSGFLNLIGGCCGTTPEHIRHMAMAVE 327
>sp|P37586|METH_SALTY Methionine synthase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=metH PE=3 SV=3
Length = 1227
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 62/336 (18%)
Query: 23 VIDGGFATQLETH--------GASINDPLW-------SALYLIKQPHLVKRVHLEYLEAG 67
V+DGG T ++++ G D W + L ++ +P ++ +H Y EAG
Sbjct: 18 VLDGGMGTMIQSYRLHEEDFRGERFAD--WPCDLKGNNDLLVLSKPEVIAAIHNAYFEAG 75
Query: 68 ADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRAL 127
ADI+ T+++ +T + AE + + A W A + P
Sbjct: 76 ADIIETNTFNSTTIAMADYRMESLSAE--INYAAAKLARACADEWTA--RTPE---KPRF 128
Query: 128 VAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLE 187
VA +G + + + + ++L +R + LVE G DL+ ET+ + L
Sbjct: 129 VAGVLGPTNRTASISPDVNDPAFRNITFDQLVAAYRESTKALVEGGADLILIETVFDTLN 188
Query: 188 AQALVELLEEE----NIQIPSWICFSSVDGE----NAPSGESFKECLDIINKSGKVNAVG 239
A+A V ++EE + +P I + D + + E+F L + + G
Sbjct: 189 AKAAVFAVKEEFEALGVDLPIMISGTITDASGRTLSGQTTEAFYNSL----RHAEALTFG 244
Query: 240 INCA--PPQFVENLICYFKELTKKA---IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESF 294
+NCA P + L Y +EL++ A + +PN+G LP+ G+ ++
Sbjct: 245 LNCALGP----DELRQYVQELSRIAECYVTAHPNAG----------LPN-AFGEYDLDAD 289
Query: 295 AT-----RWRDSG-AKLIGGCCRTTPSTIQAVSKVL 324
W ++G ++GGCC TTP I A+S+ +
Sbjct: 290 TMAKQIREWAEAGFLNIVGGCCGTTPEHIAAMSRAV 325
>sp|Q9I2Q2|METH_PSEAE Methionine synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=metH PE=3 SV=1
Length = 1234
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 142/325 (43%), Gaps = 40/325 (12%)
Query: 23 VIDGGFATQLETH--------GASINDPLWSA-------LYLIKQPHLVKRVHLEYLEAG 67
++DGG T ++++ G D W + L L+ +P +++ + YL+AG
Sbjct: 25 ILDGGMGTMIQSYKLEEADYRGERFAD--WPSDVKGNNDLLLLSRPDVIQAIEKAYLDAG 82
Query: 68 ADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRAL 127
ADIL T+++ AT G+ A L + LA + D P
Sbjct: 83 ADILETNTFNATQVSQADYGMQ-SLAYELNVEGARLARQVADAKTAETPDKP------RF 135
Query: 128 VAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLE 187
VA +G + + + V ++L + + + L+E G DL+ ETI + L
Sbjct: 136 VAGVLGPTSRTCSISPDVNNPGYRNVTFDELVENYVEATRGLIEGGADLILIETIFDTLN 195
Query: 188 AQALV----ELLEEENIQIPSWICFSSVDGENAP-SGESFKECLDIINKSGKVNAVGINC 242
A+A + + EE +++P I + D SG++ + + + + + +VG+NC
Sbjct: 196 AKAAIFAVQGVFEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVRHARPI-SVGLNC 254
Query: 243 APPQFVENLICYFKELTKKA---IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWR 299
A + L Y +EL+ KA + +PN+G ++ S E FA
Sbjct: 255 A--LGAKELRPYIEELSTKADTHVSAHPNAG--LPNAFGEYDESPAEMAVVVEEFAAA-- 308
Query: 300 DSGAKLIGGCCRTTPSTIQAVSKVL 324
++GGCC TTP+ I+A++K +
Sbjct: 309 -GFLNIVGGCCGTTPAHIEAIAKAV 332
>sp|Q9Z2Q4|METH_RAT Methionine synthase OS=Rattus norvegicus GN=Mtr PE=2 SV=1
Length = 1253
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 147/328 (44%), Gaps = 44/328 (13%)
Query: 23 VIDGGFATQLETH--------GASIND---PLW--SALYLIKQPHLVKRVHLEYLEAGAD 69
V+DGG T ++ + G D PL + + I QP ++ ++H EYL AGAD
Sbjct: 19 VLDGGMGTMIQRYKLSEENFQGQEFKDHSRPLKGNNDILSITQPDVIYQIHKEYLLAGAD 78
Query: 70 ILVTSSYQATIPGFLSRGLSIEEAESLLEK-SVTLAVEARDKFWDAVKKVPGHNYNRALV 128
I+ T+++ +T SI +A+ LE + + + D A +++ + V
Sbjct: 79 IIETNTFSST---------SIAQADYGLEHLAYRMNKCSADVARKAAEEITLQTGVKRFV 129
Query: 129 AASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEA 188
A S+G L+ + ++L + ++ + + L++ G D+L ETI + A
Sbjct: 130 AGSLGPTNKTLSVSPSVERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIETIFDTANA 189
Query: 189 QALVELLE---EENIQIPSWICFSS--VDGENAP-SGESFKECLDIINKSGKVNAVGINC 242
+A + L+ EEN P I S VD SG++ + + ++ S + +G+NC
Sbjct: 190 KAALFALQKLFEENYASPRPIFISGTIVDKSGRTLSGQTGEAFVTSVSHSDPL-CIGLNC 248
Query: 243 A-----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATR 297
A F+E + + T ++ YPN+G + + + + FA
Sbjct: 249 ALGAAEMRPFIETI----GKCTTAYVLCYPNAG--LPNTFGDYDETPAMMAMHLKDFAV- 301
Query: 298 WRDSGAKLIGGCCRTTPSTIQAVSKVLK 325
D ++GGCC +TP I+ +++ +K
Sbjct: 302 --DGLVNVVGGCCGSTPDHIREIAEAVK 327
>sp|Q5RF32|BHMT2_PONAB S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Pongo
abelii GN=BHMT2 PE=2 SV=1
Length = 363
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 131/327 (40%), Gaps = 58/327 (17%)
Query: 17 KAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSY 76
++G + DG F LE G + LW+ +I+ P V+++H+E+L AG++++ T ++
Sbjct: 18 ESGEVVIGDGSFLITLEKRG-YVKAGLWTPEAVIEHPDAVRQLHMEFLRAGSNVMQTFTF 76
Query: 77 QATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYG 136
A+ S+ + A L + V G
Sbjct: 77 SASEDNMESKWEDVNAAACDLAREVA------------------------------GKGD 106
Query: 137 AYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLE 196
A +A G + Y D ++K R++L+V D L E + EA VE+L+
Sbjct: 107 ALVAGGICQTSIYKYHKDEARIKKLFRQQLEVFAWKNVDFLIAEYFEHVEEAVWAVEVLK 166
Query: 197 EENIQIPSWICFSSVDGENAPSGESFK----ECLDIINKSGKVNAVGINCA-PPQFVENL 251
E + + +C S P G+ EC + K+G + VG+NC P+
Sbjct: 167 ESDRPVAVTMCIS-------PEGDMHDITPGECAVRLVKAG-ASIVGVNCRFGPETSLKT 218
Query: 252 ICYFKELTKKA-----IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW-------- 298
I KE ++A ++V P D + ++ G ATRW
Sbjct: 219 IELMKEGLQRAGLKAHLMVQPLGFHTPDCGKEGFVDLPEYPFGLESRAATRWDIQKYARE 278
Query: 299 -RDSGAKLIGGCCRTTPSTIQAVSKVL 324
+ G + IGGCC P I+A+++ L
Sbjct: 279 AYNQGVRYIGGCCGFEPYHIRAIAEEL 305
>sp|O09171|BHMT1_RAT Betaine--homocysteine S-methyltransferase 1 OS=Rattus norvegicus
GN=Bhmt PE=1 SV=1
Length = 407
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 47/325 (14%)
Query: 18 AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ 77
AG + DGGF LE G P W+ ++ P V+++H E+L AG++++ T ++
Sbjct: 19 AGEVVIGDGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 78 ATIPGFLSRGLSIEE---AESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGS 134
A+ +RG + E + + E + +A + D+ ALVA +
Sbjct: 78 ASEDKLENRGNYVAEKISGQKVNEAACDIARQVADE-------------GDALVAGGVSQ 124
Query: 135 YGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVEL 194
+YL+ SE E K FH++ L+V ++ D L E + EA VE
Sbjct: 125 TPSYLSCKSE----------TEVKKIFHQQ-LEVFMKKNVDFLIAEYFEHVEEAVWAVEA 173
Query: 195 LEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA-PPQFVENLIC 253
L+ I + +C + E G S EC + K+G VG+NC P I
Sbjct: 174 LKTSGKPIAATMC---IGPEGDLHGVSPGECAVRLVKAGAA-IVGVNCHFDPSTSLQTIK 229
Query: 254 YFKE-----LTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW------RDS- 301
KE K ++ + + D + ++ G ATRW R++
Sbjct: 230 LMKEGLEAARLKAYLMSHALAYHTPDCGKQGFIDLPEFPFGLEPRVATRWDIQKYAREAY 289
Query: 302 --GAKLIGGCCRTTPSTIQAVSKVL 324
G + IGGCC P I+A+++ L
Sbjct: 290 NLGVRYIGGCCGFEPYHIRAIAEEL 314
>sp|Q68FT5|BHMT2_RAT S-methylmethionine--homocysteine S-methyltransferase BHMT2
OS=Rattus norvegicus GN=Bhmt2 PE=2 SV=1
Length = 363
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 133/335 (39%), Gaps = 76/335 (22%)
Query: 18 AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ 77
+G V DGGF LE G + LW+ +++ P V+++H E+L AGAD+L T ++
Sbjct: 19 SGEVVVGDGGFLFTLEKRG-FVKAGLWTPEAVVEYPSAVRQLHTEFLRAGADVLQTFTFS 77
Query: 78 ATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGA 137
A AE +E W+AV N +A + GA
Sbjct: 78 A--------------AEDRMESK-----------WEAV------NAAACDLAQEVADGGA 106
Query: 138 YL-ADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLE 196
L A G + Y D ++K+ R +L V D L E + EA VE+L
Sbjct: 107 ALVAGGICQTSLYKYHKDETRIKNIFRLQLGVFARKNVDFLIAEYFEHVEEAVWAVEVLR 166
Query: 197 EENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFK 256
E + +C + E G + EC ++++G N +G+NC +F
Sbjct: 167 EVGAPVAVTMC---IGPEGDMHGVTPGECAVRLSRAG-ANIIGVNC---RFGPWTSLQTM 219
Query: 257 ELTKKAIVVYPNSGEVWDGRAKKWLPSKCLG-------DGKFESF-----------ATRW 298
+L K+ + D + L +CLG G F ATRW
Sbjct: 220 KLMKEGLR---------DAGLQAHLMVQCLGFHTPDCGKGGFVDLPEYPFGLEPRVATRW 270
Query: 299 ------RDS---GAKLIGGCCRTTPSTIQAVSKVL 324
R++ G + IGGCC P I+A+++ L
Sbjct: 271 DIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEEL 305
>sp|Q5I597|BHMT1_BOVIN Betaine--homocysteine S-methyltransferase 1 OS=Bos taurus GN=BHMT
PE=2 SV=1
Length = 407
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 143/345 (41%), Gaps = 57/345 (16%)
Query: 2 GKENTTASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHL 61
G +N L+ L +G + DGGF LE G P W+ ++ P V+++H
Sbjct: 5 GGKNVKKGILERL--NSGEVIIGDGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHR 61
Query: 62 EYLEAGADILVTSSYQATIPGFLSRGLSIEE---AESLLEKSVTLAVEARDKFWDAVKKV 118
E+L AG++++ T ++ A+ +RG + E + + E + +A + D+
Sbjct: 62 EFLRAGSNVMQTFTFYASEDKLENRGNYVAEKISGQKVNEAACDIARQVADE-------- 113
Query: 119 PGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLA 178
ALVA + +YL+ SE ++K +++L+V V+ D L
Sbjct: 114 -----GDALVAGGVSQTPSYLSCKSE-----------TEVKKVFQQQLEVFVKKNVDFLI 157
Query: 179 FETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFK----ECLDIINKSGK 234
E + EA VE L+ + + +C P G+ EC + K+G
Sbjct: 158 AEYFEHVEEAVWAVEALKASGKPVAATMCI-------GPEGDLHSVTPGECAVRLVKAG- 209
Query: 235 VNAVGINCA-PPQFVENLICYFKELTKKA-----IVVYPNSGEVWDGRAKKWLPSKCLGD 288
+ VG+NC P + KE + A ++ P + D + ++
Sbjct: 210 ASIVGVNCHFDPTISLQTVKLMKEGLEAAGLKAHLMSQPLAYHTPDCGKQGFIDLPEFPF 269
Query: 289 GKFESFATRW------RDS---GAKLIGGCCRTTPSTIQAVSKVL 324
G ATRW R++ G + IGGCC P I+A+++ L
Sbjct: 270 GLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEEL 314
>sp|Q93088|BHMT1_HUMAN Betaine--homocysteine S-methyltransferase 1 OS=Homo sapiens GN=BHMT
PE=1 SV=2
Length = 406
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 133/323 (41%), Gaps = 43/323 (13%)
Query: 18 AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ 77
AG + DGGF LE G P W+ ++ P V+++H E+L AG++++ T ++
Sbjct: 19 AGEIVIGDGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 78 ATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGA 137
A+ +RG + E S E + D ++V + ALVA + +
Sbjct: 78 ASEDKLENRGNYVLEKIS--------GQEVNEAACDIARQVA--DEGDALVAGGVSQTPS 127
Query: 138 YLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEE 197
YL+ SE ++K ++L+V ++ D L E + EA VE L
Sbjct: 128 YLSCKSE-----------TEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA 176
Query: 198 ENIQIPSWICFSSV-DGENAPSGESFKECLDIINKSGKVNAVGINCA-PPQFVENLICYF 255
+ + +C D P G EC + K+G + +G+NC P +
Sbjct: 177 SGKPVAATMCIGPEGDLHGVPPG----ECAVRLVKAG-ASIIGVNCHFDPTISLKTVKLM 231
Query: 256 KE-----LTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW------RDS--- 301
KE K ++ P + D + ++ G ATRW R++
Sbjct: 232 KEGLEAARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNL 291
Query: 302 GAKLIGGCCRTTPSTIQAVSKVL 324
G + IGGCC P I+A+++ L
Sbjct: 292 GVRYIGGCCGFEPYHIRAIAEEL 314
>sp|A6H5Y3|METH_MOUSE Methionine synthase OS=Mus musculus GN=Mtr PE=2 SV=1
Length = 1253
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 150/335 (44%), Gaps = 56/335 (16%)
Query: 23 VIDGGFATQLETH--------GASIND---PLW--SALYLIKQPHLVKRVHLEYLEAGAD 69
V+DGG T ++ + G D PL + + I QP ++ ++H EYL AGAD
Sbjct: 19 VLDGGMGTMIQRYKLSEEHFQGQEFKDHSRPLKGNNDILSITQPDIIYQIHKEYLLAGAD 78
Query: 70 ILVTSSYQATIPGFLSRGLSIEEAESLLEK-SVTLAVEARDKFWDAVKKVPGHNYNRALV 128
I+ T+++ +T SI +A+ LE + + + D A +++ + V
Sbjct: 79 IIETNTFSST---------SIAQADYGLEHLAYRMNKCSADVARKAAEEITLQTGVKRFV 129
Query: 129 AASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEA 188
A ++G L+ + ++L D ++ + + L++ D+L ETI + A
Sbjct: 130 AGALGPTNKTLSVSPSVERPDYRNITFDELVDAYQEQAKGLLDGRVDILLIETIFDTANA 189
Query: 189 QA---LVELLEEENIQIPSWICFSS--VDGE-NAPSGESFKECLDIINKSGKVNAVGINC 242
+A ++ L EEN P I S VD SG++ + + ++ S + +G+NC
Sbjct: 190 KAALFAIQNLFEENYAPPRPIFISGTIVDKSGRTLSGQTGEAFVTSVSHSDPL-CIGLNC 248
Query: 243 A-----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLG--DGKFESFA 295
+ F+E + + T ++ YPN+G LP+ G D + A
Sbjct: 249 SLGAAEMRPFIETI----GKCTTAYVLCYPNAG----------LPN-TFGDYDETPSTMA 293
Query: 296 TRWRDSG----AKLIGGCCRTTPSTIQAVSKVLKE 326
T +D ++GGCC +TP I+ +++ +K+
Sbjct: 294 THLKDFAVDGLVNIVGGCCGSTPDHIREIAEAVKK 328
>sp|Q5RFG2|BHMT1_PONAB Betaine--homocysteine S-methyltransferase 1 OS=Pongo abelii GN=BHMT
PE=2 SV=1
Length = 406
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 132/326 (40%), Gaps = 49/326 (15%)
Query: 18 AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ 77
AG + DGGF LE G P W+ ++ P V+++H E+L AG++++ T ++
Sbjct: 19 AGEIVIGDGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 78 ATIPGFLSRGLSIEE---AESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGS 134
A+ +RG + E + + E + +A + D+ ALVA +
Sbjct: 78 ASEDKLENRGNYVLEKISGQKVNEAACDIARQVADE-------------GDALVAGGVSQ 124
Query: 135 YGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVEL 194
+YL+ SE ++K ++L+V ++ D L E + EA VE
Sbjct: 125 TPSYLSCKSE-----------TEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVET 173
Query: 195 LEEENIQIPSWICFSSV-DGENAPSGESFKECLDIINKSGKVNAVGINCA-PPQFVENLI 252
L + + +C D P G EC + K+G + +G+NC P +
Sbjct: 174 LIASGKPVAATMCIGPEGDLHGVPPG----ECAVRLVKAG-ASIIGVNCHFDPTISLKTV 228
Query: 253 CYFKE-----LTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW--------- 298
KE K ++ P + D + ++ G ATRW
Sbjct: 229 KLMKEGLEAARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREA 288
Query: 299 RDSGAKLIGGCCRTTPSTIQAVSKVL 324
+ G + IGGCC P I+A+++ L
Sbjct: 289 YNMGIRYIGGCCGFEPYHIRAIAEEL 314
>sp|P13009|METH_ECOLI Methionine synthase OS=Escherichia coli (strain K12) GN=metH PE=1
SV=5
Length = 1227
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 142/337 (42%), Gaps = 62/337 (18%)
Query: 23 VIDGGFATQLETH--------GASINDPLW-------SALYLIKQPHLVKRVHLEYLEAG 67
V+DGG T ++++ G D W + L ++ +P ++ +H Y EAG
Sbjct: 18 VLDGGMGTMIQSYRLNEADFRGERFAD--WPCDLKGNNDLLVLSKPEVIAAIHNAYFEAG 75
Query: 68 ADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRAL 127
ADI+ T+++ +T + AE + A D++ + P +
Sbjct: 76 ADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACA-DEWTARTPEKPRY------ 128
Query: 128 VAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLE 187
VA +G + + + + + L +R + LVE G DL+ ET+ + L
Sbjct: 129 VAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIETVFDTLN 188
Query: 188 AQALVELLEEE----NIQIPSWICFSSVDGE----NAPSGESFKECLDIINKSGKVNAVG 239
A+A V ++ E +++P I + D + + E+F L + + G
Sbjct: 189 AKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSL----RHAEALTFG 244
Query: 240 INCA--PPQFVENLICYFKELTKKA---IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESF 294
+NCA P + L Y +EL++ A + +PN+G LP+ G+ ++
Sbjct: 245 LNCALGP----DELRQYVQELSRIAECYVTAHPNAG----------LPN-AFGEYDLDAD 289
Query: 295 AT-----RWRDSG-AKLIGGCCRTTPSTIQAVSKVLK 325
W +G ++GGCC TTP I A+S+ ++
Sbjct: 290 TMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVE 326
>sp|Q54P92|METH_DICDI Methionine synthase OS=Dictyostelium discoideum GN=mtr PE=3 SV=1
Length = 1260
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 50/325 (15%)
Query: 23 VIDGGFATQLETHGASINDPLW-------------SALYLIKQPHLVKRVHLEYLEAGAD 69
V+DG T+++ ND + L + QPH+++ +H +YLEAGAD
Sbjct: 26 VLDGAMGTEIQKFKLKDNDYRGEEFKDFPHELGGNNDLLSLTQPHIIREIHCKYLEAGAD 85
Query: 70 ILVTSSYQATIPGFLSRGLSIEEAESLLE-KSVTLAVEARDKFWDAVKKVPGHNYNRALV 128
+ T+++ I F +E + +S LA A +++ KK P V
Sbjct: 86 FIETNTFNGNI--FSQADYKMEHLVKRINIESARLAKSACEEY---TKKDPSR---PRFV 137
Query: 129 AASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEA 188
++G + V ++L + +++ LVE G D++ ET+ + L
Sbjct: 138 CGAVGPTNKTASISPSVERPEARNVLFDELVSGYLEQVEALVEGGIDVILVETVFDSLNC 197
Query: 189 QALVELLEE----ENIQIPSWICFSSVDGE----NAPSGESFKECLDIINKSGKVNAVGI 240
+A + +EE + ++P ++ + VD + +GE+F + S + G+
Sbjct: 198 KAALFAIEEFFKTYSPRLPVFVSGTIVDKSGRTLSGQTGEAFYTSV----ASANLMVFGL 253
Query: 241 NCA-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLG-DGKFESFATRW 298
NCA Q + + + ++ + YPN+G LP+ G D E A +
Sbjct: 254 NCALGAQEMRPFLQNISKCSECYVSCYPNAG----------LPNTFGGYDETPEMMAEQI 303
Query: 299 R---DSG-AKLIGGCCRTTPSTIQA 319
+ +SG ++GGCC T+P I+A
Sbjct: 304 KEFAESGLLNIVGGCCGTSPDHIRA 328
>sp|Q9H2M3|BHMT2_HUMAN S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Homo
sapiens GN=BHMT2 PE=1 SV=1
Length = 363
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 130/330 (39%), Gaps = 64/330 (19%)
Query: 17 KAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSY 76
++G + DG F LE G + LW+ +I+ P V+++H+E+L AG++++ T ++
Sbjct: 18 ESGEVVIGDGSFLITLEKRG-YVKAGLWTPEAVIEHPDAVRQLHMEFLRAGSNVMQTFTF 76
Query: 77 QATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYG 136
A+ S+ + A L + V ALVA I
Sbjct: 77 SASEDNMESKWEDVNAAACDLAREVA-------------------GKGDALVAGGICQTS 117
Query: 137 AYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLE 196
Y E ++K R++L+V D L E + EA VE+L+
Sbjct: 118 IYKYQKDE-----------ARIKKLFRQQLEVFAWKNVDFLIAEYFEHVEEAVWAVEVLK 166
Query: 197 EENIQIPSWICFSSVDGENAPSGESFK----ECLDIINKSGKVNAVGINCAPPQFVENLI 252
E + + +C P G+ EC + K+G + VG+NC +F +
Sbjct: 167 ESDRPVAVTMCI-------GPEGDMHDITPGECAVRLVKAG-ASIVGVNC---RFGPDTS 215
Query: 253 CYFKELTKKA---------IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW----- 298
EL K+ ++V P D + ++ G ATRW
Sbjct: 216 LKTMELMKEGLEWAGLKAHLMVQPLGFHAPDCGKEGFVDLPEYPFGLESRVATRWDIQKY 275
Query: 299 -RDS---GAKLIGGCCRTTPSTIQAVSKVL 324
R++ G + IGGCC P I+A+++ L
Sbjct: 276 AREAYNLGVRYIGGCCGFEPYHIRAIAEEL 305
>sp|Q55786|METH_SYNY3 Methionine synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=metH PE=3 SV=1
Length = 1195
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 23 VIDGGFATQLETHGASINDPLWSAL-----YLIK-QPHLVKRVHLEYLEAGADILVTSSY 76
V DG T L+ + D + YL+ +P V VH + EAGAD++ T ++
Sbjct: 18 VFDGAMGTNLQVQNLTAADFGGAEYEGCNEYLVHTKPEAVATVHRAFYEAGADVVETDTF 77
Query: 77 QATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYG 136
T P L+ +++ L + + LA +F K VA S+G
Sbjct: 78 GGT-PLVLAEYDLADQSYYLNKAAAELAKAVAAEFSTPEKP--------RFVAGSMGPGT 128
Query: 137 AYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLE 196
G VD + LKD + +++ L + G DLL ET + L+ +A + +E
Sbjct: 129 KLPTLGH---------VDYDSLKDAYVVQVRGLYDGGVDLLLVETCQDVLQIKAALNAIE 179
Query: 197 ----EENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP-PQFVENL 251
E+ ++P + + G L I+ + ++ +G+NCA P ++
Sbjct: 180 QVFAEKGDRLPLMVSVTMETMGTMLVGTEMAAALAIL-EPYPIDILGLNCATGPDLMKEH 238
Query: 252 ICYFKELTKKAIVVYPNSG--EVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGC 309
+ Y E + + PN+G E G+A L L S D G ++IGGC
Sbjct: 239 VKYLSEHSPFVVSCIPNAGLPENVGGQAFYRLTPMELQ----MSLMHFIEDLGVQVIGGC 294
Query: 310 CRTTPSTIQAVSKVLKE 326
C T P I+A++ + K+
Sbjct: 295 CGTRPDHIKALADIAKD 311
>sp|Q49775|METH_MYCLE Methionine synthase OS=Mycobacterium leprae (strain TN) GN=metH
PE=3 SV=3
Length = 1206
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 136/331 (41%), Gaps = 55/331 (16%)
Query: 13 DLIEK-AGGCAVIDGGFATQLETHGASIND--PLWSALYLIKQ--PHLVKRVHLEYLEAG 67
DL+E A V DG TQL+ +++D L ++ + P +++ +H Y EAG
Sbjct: 14 DLLETLAQRVMVGDGAMGTQLQDAELTLDDFRGLEGCNEILNETRPDVLETIHRRYFEAG 73
Query: 68 ADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRAL 127
AD++ T+++ + ++ ++ L ++ +A D+ P H R +
Sbjct: 74 ADLVETNTFGCNLSNLGDYDIA-DKIRDLSQRGTVIARRVADEL-----TTPDH--KRYV 125
Query: 128 VAASIGSYGAYLADGSEYSGNYGPGVDLEKL--------KDFHRRRLQVLVESGPDLLAF 179
+ G+ GPG L L +D + +++ G D +
Sbjct: 126 L------------------GSMGPGTKLPTLGHTEYRVVRDAYTESALGMLDGGADAVLV 167
Query: 180 ETIPNKLEAQALV----ELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKV 235
ET + L+ +A V + + IP ++ + G L + G V
Sbjct: 168 ETCQDLLQLKAAVLGSRRAMTQAGRHIPVFVHVTVETTGTMLLGSEIGAALAAVEPLG-V 226
Query: 236 NAVGINCA--PPQFVENLICYFKELTKKA---IVVYPNSGEVWDGRAKKWLPSKCLGDGK 290
+ +G+NCA P + E+L + L+K A + V PN+G G P + D
Sbjct: 227 DMIGLNCATGPAEMSEHL----RHLSKHARIPVSVMPNAGLPVLGAKGAEYPLQP--DEL 280
Query: 291 FESFATRWRDSGAKLIGGCCRTTPSTIQAVS 321
E+ A + G L+GGCC TTP I+ V+
Sbjct: 281 AEALAGFIAEFGLSLVGGCCGTTPDHIREVA 311
>sp|Q95332|BHMT1_PIG Betaine--homocysteine S-methyltransferase 1 (Fragment) OS=Sus
scrofa GN=BHMT PE=1 SV=3
Length = 278
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 32/228 (14%)
Query: 18 AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ 77
+G + DGGF LE G P W+ ++ P V+++H E+L AG++++ T ++
Sbjct: 19 SGEVVIGDGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 78 ATIPGFLSRGLSIEE---AESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGS 134
A+ +RG + E + + E + +A + D+ ALVA +
Sbjct: 78 ASEDKLENRGNYVAEKISGQKVNEAACDIARQVADE-------------GDALVAGGVSQ 124
Query: 135 YGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVEL 194
+YL+ SE ++K R++L+V ++ D L E + EA VE
Sbjct: 125 TPSYLSCKSE-----------TEVKKVFRQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEA 173
Query: 195 LEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242
L+ + + +C + E G + +C + K+G + VG+NC
Sbjct: 174 LKASGKPVAATMC---IGPEGDLHGVTPGQCAVRLVKAG-ASIVGVNC 217
>sp|O33259|METH_MYCTU Methionine synthase OS=Mycobacterium tuberculosis GN=metH PE=3 SV=1
Length = 1192
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 132/324 (40%), Gaps = 62/324 (19%)
Query: 23 VIDGGFATQLETHGASIND--PLWSALYLIKQ--PHLVKRVHLEYLEAGADILVTSSYQA 78
V DG TQL+ +++D L ++ + P +++ +H Y EAGAD + T+++
Sbjct: 23 VGDGAMGTQLQAADLTLDDFRGLEGCNEILNETRPDVLETIHRNYFEAGADAVETNTFGC 82
Query: 79 TIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAY 138
+ ++ D+ D +K G R VA +GS
Sbjct: 83 NLSNLGDYDIA-------------------DRIRDLSQK--GTAIARR-VADELGS---- 116
Query: 139 LADGSEYS-GNYGPGVDLEKL--------KDFHRRRLQVLVESGPDLLAFETIPNKLEAQ 189
D Y G+ GPG L L +D + +++ G D + ET + L+ +
Sbjct: 117 -PDRKRYVLGSMGPGTKLPTLGHTEYAVIRDAYTEAALGMLDGGADAILVETCQDLLQLK 175
Query: 190 ALV----ELLEEENIQIPSWICFSSVDGENAPS---GESFKECLDIINKSGKVNAVGINC 242
A V + IP F+ V E + G L + G V+ +G+NC
Sbjct: 176 AAVLGSRRAMTRAGRHIP---VFAHVTVETTGTMLLGSEIGAALTAVEPLG-VDMIGLNC 231
Query: 243 A--PPQFVENLICYFKELTKKA---IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATR 297
A P + E+L + L++ A + V PN+G G P L D E+ A
Sbjct: 232 ATGPAEMSEHL----RHLSRHARIPVSVMPNAGLPVLGAKGAEYP--LLPDELAEALAGF 285
Query: 298 WRDSGAKLIGGCCRTTPSTIQAVS 321
+ G L+GGCC TTP+ I+ V+
Sbjct: 286 IAEFGLSLVGGCCGTTPAHIREVA 309
>sp|Q91WS4|BHMT2_MOUSE S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Mus
musculus GN=Bhmt2 PE=1 SV=2
Length = 363
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 128/335 (38%), Gaps = 76/335 (22%)
Query: 18 AGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQ 77
+G V D GF LE G + LW+ +++ P V+++H E+L AGAD+L T ++
Sbjct: 19 SGEVVVGDSGFLFTLEKRG-FVKAGLWTPEAVVEHPSAVRQLHTEFLRAGADVLQTFTFS 77
Query: 78 ATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGA 137
AT S+ ++ A L + V A + + + Y++
Sbjct: 78 ATEDNMASKWEAVNAAACDLAQEVAGGGGALVA--GGICQTSLYKYHK------------ 123
Query: 138 YLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEE 197
D ++K+ R +L+V D L E + EA VE+L E
Sbjct: 124 ----------------DETRIKNIFRLQLEVFARKNVDFLIAEYFEHVEEAVWAVEVLRE 167
Query: 198 ENIQIPSWICFSSV-DGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFK 256
+ +C D + GE C + ++G + +G+NC +F
Sbjct: 168 VGAPVAVTMCIGPEGDMHDVTPGE----CAVKLARAG-ADIIGVNC---RFGPWTSLQTM 219
Query: 257 ELTKKAIVVYPNSGEVWDGRAKKWLPSKCLG-------DGKFESF-----------ATRW 298
+L K+ + D + L +CLG G F ATRW
Sbjct: 220 KLMKEGLR---------DASLQAHLMVQCLGFHTPDCGKGGFVDLPEYPFGLEPRVATRW 270
Query: 299 ------RDS---GAKLIGGCCRTTPSTIQAVSKVL 324
R++ G + IGGCC P I+A+++ L
Sbjct: 271 DIQKYAREAYNLGIRYIGGCCGFEPYHIRAIAEEL 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,853,300
Number of Sequences: 539616
Number of extensions: 5464754
Number of successful extensions: 14747
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 14588
Number of HSP's gapped (non-prelim): 91
length of query: 328
length of database: 191,569,459
effective HSP length: 118
effective length of query: 210
effective length of database: 127,894,771
effective search space: 26857901910
effective search space used: 26857901910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)