Query 020275
Match_columns 328
No_of_seqs 109 out of 1049
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 14:25:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020275.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020275hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lt8_A Betaine-homocysteine me 100.0 7.3E-73 2.5E-77 547.8 27.2 290 6-325 8-315 (406)
2 1q7z_A 5-methyltetrahydrofolat 100.0 3.5E-70 1.2E-74 550.8 32.6 284 8-327 4-290 (566)
3 3igs_A N-acetylmannosamine-6-p 96.0 0.4 1.4E-05 42.2 17.0 87 163-265 91-186 (232)
4 3nav_A Tryptophan synthase alp 95.5 0.32 1.1E-05 44.1 14.2 162 54-265 34-213 (271)
5 1lt8_A Betaine-homocysteine me 95.1 0.3 1E-05 46.8 13.4 155 154-325 52-232 (406)
6 3q58_A N-acetylmannosamine-6-p 95.1 1.1 3.7E-05 39.4 16.1 87 163-265 91-186 (229)
7 3vnd_A TSA, tryptophan synthas 95.0 0.67 2.3E-05 41.8 14.9 171 46-265 22-211 (267)
8 2ehh_A DHDPS, dihydrodipicolin 95.0 0.82 2.8E-05 41.6 15.7 144 153-324 18-177 (294)
9 2v9d_A YAGE; dihydrodipicolini 94.9 0.76 2.6E-05 42.9 15.4 144 153-324 49-208 (343)
10 3cpr_A Dihydrodipicolinate syn 94.9 0.38 1.3E-05 44.2 13.0 104 153-269 34-151 (304)
11 1o5k_A DHDPS, dihydrodipicolin 94.8 0.99 3.4E-05 41.4 15.8 144 153-324 30-189 (306)
12 3fkr_A L-2-keto-3-deoxyarabona 94.8 2.1 7.2E-05 39.2 17.8 144 153-324 26-188 (309)
13 3si9_A DHDPS, dihydrodipicolin 94.7 0.36 1.2E-05 44.6 12.3 104 153-269 40-157 (315)
14 2vc6_A MOSA, dihydrodipicolina 94.5 0.36 1.2E-05 44.0 11.9 104 153-269 18-135 (292)
15 3tak_A DHDPS, dihydrodipicolin 94.5 0.46 1.6E-05 43.3 12.5 104 153-269 19-136 (291)
16 2e6f_A Dihydroorotate dehydrog 94.4 0.37 1.3E-05 44.1 11.8 116 166-306 31-192 (314)
17 1xky_A Dihydrodipicolinate syn 94.4 0.52 1.8E-05 43.2 12.6 104 153-269 30-147 (301)
18 3dz1_A Dihydrodipicolinate syn 94.3 2.1 7.1E-05 39.3 16.7 145 153-324 26-186 (313)
19 2qjg_A Putative aldolase MJ040 94.3 2 6.8E-05 38.2 16.2 119 165-304 104-232 (273)
20 1q7z_A 5-methyltetrahydrofolat 94.3 1.9 6.6E-05 43.0 17.5 157 154-326 42-223 (566)
21 3flu_A DHDPS, dihydrodipicolin 94.3 0.75 2.6E-05 42.0 13.5 104 153-269 25-142 (297)
22 2ojp_A DHDPS, dihydrodipicolin 94.1 0.6 2E-05 42.5 12.4 104 153-269 19-136 (292)
23 3m5v_A DHDPS, dihydrodipicolin 94.0 0.71 2.4E-05 42.3 12.7 104 153-269 25-143 (301)
24 2r8w_A AGR_C_1641P; APC7498, d 93.9 0.72 2.4E-05 42.9 12.8 104 153-269 52-169 (332)
25 2yxg_A DHDPS, dihydrodipicolin 93.9 0.59 2E-05 42.5 11.8 104 153-269 18-135 (289)
26 3a5f_A Dihydrodipicolinate syn 93.9 0.43 1.5E-05 43.5 10.9 104 153-269 19-136 (291)
27 3qfe_A Putative dihydrodipicol 93.8 1.7 5.7E-05 40.1 14.9 105 153-270 29-149 (318)
28 3d0c_A Dihydrodipicolinate syn 93.7 0.8 2.7E-05 42.2 12.4 105 153-271 30-148 (314)
29 1z41_A YQJM, probable NADH-dep 93.6 1.6 5.3E-05 40.5 14.5 134 156-307 39-247 (338)
30 3qze_A DHDPS, dihydrodipicolin 93.6 0.84 2.9E-05 42.1 12.5 104 153-269 41-158 (314)
31 3na8_A Putative dihydrodipicol 93.6 0.84 2.9E-05 42.1 12.4 104 153-269 42-159 (315)
32 2rfg_A Dihydrodipicolinate syn 93.5 0.69 2.4E-05 42.3 11.7 104 153-269 18-135 (297)
33 4h3d_A 3-dehydroquinate dehydr 93.5 1.5 5.2E-05 39.2 13.7 149 154-320 30-188 (258)
34 3i4e_A Isocitrate lyase; struc 93.5 2.3 7.9E-05 40.9 15.5 135 163-307 170-350 (439)
35 3e96_A Dihydrodipicolinate syn 93.4 0.68 2.3E-05 42.7 11.5 102 153-268 30-145 (316)
36 1to3_A Putative aldolase YIHT; 93.4 1.9 6.4E-05 39.6 14.3 118 166-304 114-249 (304)
37 3l21_A DHDPS, dihydrodipicolin 93.3 0.76 2.6E-05 42.1 11.7 104 153-269 33-150 (304)
38 1f6k_A N-acetylneuraminate lya 93.3 0.79 2.7E-05 41.7 11.7 104 153-269 21-139 (293)
39 3s5o_A 4-hydroxy-2-oxoglutarat 93.3 0.8 2.7E-05 42.0 11.8 104 153-269 32-151 (307)
40 3b4u_A Dihydrodipicolinate syn 93.3 1 3.5E-05 41.0 12.4 104 153-269 21-142 (294)
41 1f76_A Dihydroorotate dehydrog 93.2 0.76 2.6E-05 42.5 11.6 121 167-306 72-242 (336)
42 2wkj_A N-acetylneuraminate lya 93.2 0.98 3.4E-05 41.4 12.2 104 153-269 29-147 (303)
43 3daq_A DHDPS, dihydrodipicolin 93.2 1.1 3.7E-05 40.8 12.4 104 153-269 20-137 (292)
44 3eol_A Isocitrate lyase; seatt 93.1 2.8 9.6E-05 40.3 15.4 135 163-307 163-345 (433)
45 3lg3_A Isocitrate lyase; conse 93.1 3 0.0001 40.0 15.6 135 163-307 170-350 (435)
46 3eb2_A Putative dihydrodipicol 93.0 1.4 4.9E-05 40.2 13.1 105 153-270 22-140 (300)
47 1jub_A Dihydroorotate dehydrog 92.9 0.68 2.3E-05 42.3 10.6 116 165-305 28-188 (311)
48 1ydo_A HMG-COA lyase; TIM-barr 92.8 1.1 3.8E-05 41.1 12.0 131 62-231 89-225 (307)
49 3lye_A Oxaloacetate acetyl hyd 92.7 2.4 8.2E-05 39.0 13.8 43 163-209 181-223 (307)
50 2hmc_A AGR_L_411P, dihydrodipi 92.2 1.4 4.9E-05 41.1 12.0 102 153-269 44-160 (344)
51 2nuw_A 2-keto-3-deoxygluconate 91.9 2.7 9.1E-05 38.1 13.2 102 153-269 17-132 (288)
52 2r91_A 2-keto-3-deoxy-(6-phosp 91.8 3.1 0.0001 37.6 13.4 102 153-269 16-131 (286)
53 3noy_A 4-hydroxy-3-methylbut-2 91.5 1.7 5.7E-05 40.8 11.3 140 163-321 49-197 (366)
54 2cw6_A Hydroxymethylglutaryl-C 91.4 2.9 0.0001 37.9 12.9 131 62-231 88-224 (298)
55 1w3i_A EDA, 2-keto-3-deoxy glu 91.4 3.8 0.00013 37.1 13.7 102 153-269 17-132 (293)
56 3b0p_A TRNA-dihydrouridine syn 91.1 1.4 4.7E-05 41.2 10.6 113 172-305 27-160 (350)
57 3h5d_A DHDPS, dihydrodipicolin 90.8 1.9 6.6E-05 39.6 11.2 99 162-269 30-143 (311)
58 1m3u_A 3-methyl-2-oxobutanoate 90.8 2.7 9.3E-05 37.7 11.8 40 160-205 161-200 (264)
59 2ftp_A Hydroxymethylglutaryl-C 90.8 4.4 0.00015 36.8 13.5 140 51-231 84-227 (302)
60 1zco_A 2-dehydro-3-deoxyphosph 90.4 9.3 0.00032 34.1 16.6 194 50-325 33-256 (262)
61 1o66_A 3-methyl-2-oxobutanoate 90.1 9.9 0.00034 34.3 14.9 171 4-205 2-200 (275)
62 2nx9_A Oxaloacetate decarboxyl 90.1 6.1 0.00021 38.3 14.5 99 163-268 103-209 (464)
63 3rmj_A 2-isopropylmalate synth 90.1 5.5 0.00019 37.5 13.8 125 52-213 85-214 (370)
64 1ydn_A Hydroxymethylglutaryl-C 89.7 6.1 0.00021 35.6 13.5 135 60-231 85-223 (295)
65 4dpp_A DHDPS 2, dihydrodipicol 89.3 3.5 0.00012 38.7 11.7 102 153-269 77-192 (360)
66 1aj0_A DHPS, dihydropteroate s 88.9 13 0.00044 33.5 14.9 167 125-324 14-204 (282)
67 3i4e_A Isocitrate lyase; struc 88.8 6 0.00021 38.0 13.0 35 163-198 274-309 (439)
68 1ydn_A Hydroxymethylglutaryl-C 88.6 5.4 0.00018 36.0 12.2 100 164-270 83-211 (295)
69 1zlp_A PSR132, petal death pro 88.5 0.57 1.9E-05 43.4 5.5 44 161-209 190-233 (318)
70 1qop_A Tryptophan synthase alp 88.4 13 0.00044 33.0 14.8 92 163-265 112-210 (268)
71 3ewb_X 2-isopropylmalate synth 88.4 12 0.00043 33.7 14.5 139 52-231 78-221 (293)
72 1rqb_A Transcarboxylase 5S sub 88.3 12 0.00042 36.9 15.4 99 163-268 120-228 (539)
73 3khj_A Inosine-5-monophosphate 88.3 12 0.00042 34.9 14.8 65 164-241 157-236 (361)
74 4fxs_A Inosine-5'-monophosphat 88.3 7.4 0.00025 38.0 13.8 66 164-242 284-364 (496)
75 3fa4_A 2,3-dimethylmalate lyas 88.2 7.1 0.00024 35.7 12.7 43 163-209 173-215 (302)
76 1vhn_A Putative flavin oxidore 87.9 1.7 6E-05 39.8 8.5 91 171-270 26-136 (318)
77 1xg4_A Probable methylisocitra 87.8 0.62 2.1E-05 42.7 5.3 43 162-209 169-211 (295)
78 4g9p_A 4-hydroxy-3-methylbut-2 87.7 2 6.8E-05 40.9 8.7 81 163-244 41-148 (406)
79 1f8m_A Isocitrate lyase, ICL; 87.6 13 0.00045 35.6 14.6 136 163-306 166-345 (429)
80 3eoo_A Methylisocitrate lyase; 87.6 0.87 3E-05 41.8 6.1 43 162-209 173-215 (298)
81 4ef8_A Dihydroorotate dehydrog 87.3 3.9 0.00013 38.3 10.6 78 201-302 126-220 (354)
82 4fo4_A Inosine 5'-monophosphat 87.3 14 0.00046 34.7 14.4 66 163-240 110-176 (366)
83 1nvm_A HOA, 4-hydroxy-2-oxoval 87.2 18 0.00063 33.3 17.7 96 165-268 98-202 (345)
84 1s2w_A Phosphoenolpyruvate pho 87.1 0.72 2.5E-05 42.2 5.3 42 163-207 173-215 (295)
85 1jub_A Dihydroorotate dehydrog 87.1 14 0.0005 33.2 14.2 138 161-325 107-290 (311)
86 3f4w_A Putative hexulose 6 pho 86.6 13 0.00046 31.2 13.5 90 163-264 16-107 (211)
87 4fo4_A Inosine 5'-monophosphat 86.6 16 0.00056 34.2 14.5 66 163-241 160-240 (366)
88 3ih1_A Methylisocitrate lyase; 86.5 0.59 2E-05 43.1 4.4 42 163-209 178-219 (305)
89 3eol_A Isocitrate lyase; seatt 86.5 21 0.00073 34.2 15.3 34 163-197 269-303 (433)
90 3usb_A Inosine-5'-monophosphat 86.4 11 0.00037 37.0 13.7 66 164-242 309-389 (511)
91 1thf_D HISF protein; thermophI 86.4 12 0.0004 32.5 12.9 97 164-265 87-200 (253)
92 1m3u_A 3-methyl-2-oxobutanoate 86.4 10 0.00035 34.0 12.3 92 166-266 100-202 (264)
93 3ble_A Citramalate synthase fr 86.3 8.3 0.00028 35.6 12.3 116 62-213 104-223 (337)
94 4ay7_A Methylcobalamin\: coenz 86.2 20 0.00069 32.8 17.8 84 165-258 254-346 (348)
95 3o1n_A 3-dehydroquinate dehydr 86.0 15 0.00051 33.0 13.5 148 154-322 50-210 (276)
96 2ekc_A AQ_1548, tryptophan syn 85.9 18 0.00062 32.0 15.7 92 163-265 112-211 (262)
97 1f8m_A Isocitrate lyase, ICL; 85.8 6.4 0.00022 37.8 11.3 34 163-197 270-304 (429)
98 2yr1_A 3-dehydroquinate dehydr 85.1 20 0.00068 31.8 14.6 133 154-305 30-172 (257)
99 2hjp_A Phosphonopyruvate hydro 85.0 0.76 2.6E-05 42.0 4.3 43 163-208 169-212 (290)
100 4avf_A Inosine-5'-monophosphat 84.2 13 0.00046 36.1 13.2 66 164-242 282-362 (490)
101 2w6r_A Imidazole glycerol phos 84.0 15 0.0005 32.1 12.4 100 165-265 88-205 (266)
102 3eeg_A 2-isopropylmalate synth 83.8 3.8 0.00013 37.8 8.6 139 51-230 78-221 (325)
103 1vs1_A 3-deoxy-7-phosphoheptul 83.8 24 0.00082 31.6 14.5 29 50-78 48-76 (276)
104 1o66_A 3-methyl-2-oxobutanoate 83.7 24 0.00083 31.7 14.4 91 167-266 102-202 (275)
105 3lg3_A Isocitrate lyase; conse 83.6 17 0.00057 34.9 13.1 35 163-198 274-309 (435)
106 1ka9_F Imidazole glycerol phos 83.4 16 0.00054 31.6 12.3 97 164-265 88-201 (252)
107 2qf7_A Pyruvate carboxylase pr 83.2 18 0.00061 39.2 14.7 100 164-268 649-760 (1165)
108 3ovp_A Ribulose-phosphate 3-ep 83.2 8.5 0.00029 33.5 10.2 50 163-212 20-75 (228)
109 1ps9_A 2,4-dienoyl-COA reducta 83.1 18 0.00061 36.3 14.0 135 155-307 36-246 (671)
110 3oix_A Putative dihydroorotate 83.0 15 0.00052 34.1 12.4 80 201-305 128-223 (345)
111 3hgj_A Chromate reductase; TIM 82.8 28 0.00096 32.1 14.3 151 152-324 141-335 (349)
112 1vr6_A Phospho-2-dehydro-3-deo 82.7 30 0.001 32.2 14.3 52 50-111 116-169 (350)
113 2ze3_A DFA0005; organic waste 82.7 2.3 7.8E-05 38.4 6.4 117 51-205 89-208 (275)
114 1tx2_A DHPS, dihydropteroate s 82.4 12 0.00043 33.9 11.3 119 125-271 39-170 (297)
115 2ojp_A DHDPS, dihydrodipicolin 82.3 28 0.00094 31.3 15.0 109 52-206 20-132 (292)
116 3f4w_A Putative hexulose 6 pho 82.2 15 0.00051 30.8 11.3 90 165-265 69-164 (211)
117 3b8i_A PA4872 oxaloacetate dec 81.9 1.3 4.3E-05 40.4 4.4 38 163-205 171-208 (287)
118 1icp_A OPR1, 12-oxophytodienoa 81.6 23 0.00078 33.2 13.3 77 223-306 170-273 (376)
119 3tdn_A FLR symmetric alpha-bet 81.5 2.9 9.8E-05 36.6 6.5 97 164-265 92-205 (247)
120 1sfl_A 3-dehydroquinate dehydr 81.4 23 0.00078 30.9 12.4 126 164-305 21-158 (238)
121 1rqb_A Transcarboxylase 5S sub 81.3 41 0.0014 33.2 15.3 65 160-229 175-242 (539)
122 2nx9_A Oxaloacetate decarboxyl 81.2 41 0.0014 32.5 15.6 64 160-230 158-224 (464)
123 3oix_A Putative dihydroorotate 80.4 36 0.0012 31.4 14.2 133 162-325 143-323 (345)
124 1ujp_A Tryptophan synthase alp 80.2 32 0.0011 30.7 13.4 92 163-265 109-207 (271)
125 3o1n_A 3-dehydroquinate dehydr 79.9 15 0.00052 33.0 10.9 104 161-269 120-230 (276)
126 3qja_A IGPS, indole-3-glycerol 79.5 14 0.00048 33.1 10.5 84 165-265 127-218 (272)
127 2cw6_A Hydroxymethylglutaryl-C 79.2 27 0.00093 31.4 12.5 96 165-267 85-207 (298)
128 2v82_A 2-dehydro-3-deoxy-6-pho 79.0 28 0.00095 29.2 20.2 80 164-264 71-152 (212)
129 2uwf_A Endoxylanase, alkaline 78.9 14 0.00047 34.4 10.6 51 159-211 201-259 (356)
130 3zwt_A Dihydroorotate dehydrog 77.6 17 0.00057 34.1 10.8 85 201-304 146-249 (367)
131 1vzw_A Phosphoribosyl isomeras 77.6 10 0.00035 32.8 8.9 97 163-265 87-195 (244)
132 1f76_A Dihydroorotate dehydrog 77.6 31 0.001 31.4 12.5 140 157-323 150-335 (336)
133 3m47_A Orotidine 5'-phosphate 77.5 23 0.00078 30.7 11.1 98 50-195 74-171 (228)
134 2pcq_A Putative dihydrodipicol 77.1 10 0.00035 34.0 9.0 98 153-269 16-127 (283)
135 1vrd_A Inosine-5'-monophosphat 76.9 43 0.0015 32.2 14.0 68 163-242 239-307 (494)
136 2e6f_A Dihydroorotate dehydrog 76.9 22 0.00076 31.9 11.3 137 162-325 108-292 (314)
137 4ay7_A Methylcobalamin\: coenz 76.7 45 0.0015 30.4 15.9 140 161-326 191-345 (348)
138 2yw3_A 4-hydroxy-2-oxoglutarat 76.5 34 0.0012 29.0 14.4 118 163-324 73-197 (207)
139 1j93_A UROD, uroporphyrinogen 75.6 48 0.0016 30.2 14.9 143 158-328 191-352 (353)
140 3glc_A Aldolase LSRF; TIM barr 75.3 31 0.0011 31.2 11.6 114 166-304 131-252 (295)
141 2inf_A URO-D, UPD, uroporphyri 75.2 50 0.0017 30.3 15.3 139 157-326 190-348 (359)
142 2qiw_A PEP phosphonomutase; st 75.1 2.1 7.2E-05 38.2 3.7 38 163-205 171-208 (255)
143 2vc6_A MOSA, dihydrodipicolina 74.2 48 0.0017 29.6 22.3 152 52-252 19-174 (292)
144 1eep_A Inosine 5'-monophosphat 74.1 52 0.0018 30.8 13.4 66 163-240 155-221 (404)
145 1mxs_A KDPG aldolase; 2-keto-3 74.1 42 0.0015 28.9 12.3 108 164-315 89-201 (225)
146 3dxi_A Putative aldolase; TIM 73.9 18 0.00061 33.2 9.8 91 171-267 98-193 (320)
147 2r91_A 2-keto-3-deoxy-(6-phosp 73.9 49 0.0017 29.5 14.6 146 52-253 17-167 (286)
148 2yxg_A DHDPS, dihydrodipicolin 73.7 50 0.0017 29.5 22.2 153 52-253 19-175 (289)
149 2ftp_A Hydroxymethylglutaryl-C 73.6 51 0.0017 29.6 15.8 101 164-270 87-215 (302)
150 3ffs_A Inosine-5-monophosphate 73.3 30 0.001 32.8 11.4 65 164-241 196-275 (400)
151 2yim_A Probable alpha-methylac 73.1 6.8 0.00023 36.7 6.8 56 50-137 61-116 (360)
152 3hbl_A Pyruvate carboxylase; T 73.1 61 0.0021 35.0 15.0 101 164-268 631-743 (1150)
153 1sfl_A 3-dehydroquinate dehydr 73.0 47 0.0016 28.9 12.1 104 162-270 85-196 (238)
154 1eye_A DHPS 1, dihydropteroate 73.0 52 0.0018 29.5 13.8 147 125-304 5-170 (280)
155 1w3i_A EDA, 2-keto-3-deoxy glu 72.8 53 0.0018 29.4 13.5 145 52-253 18-168 (293)
156 3vav_A 3-methyl-2-oxobutanoate 72.7 4.9 0.00017 36.3 5.5 51 160-220 173-223 (275)
157 2eja_A URO-D, UPD, uroporphyri 72.6 35 0.0012 31.0 11.6 28 165-192 244-271 (338)
158 1tqj_A Ribulose-phosphate 3-ep 72.1 16 0.00055 31.6 8.6 49 163-212 20-73 (230)
159 1q7e_A Hypothetical protein YF 72.0 7 0.00024 37.5 6.7 40 50-94 76-115 (428)
160 2dep_A Xylanase B, thermostabl 71.9 32 0.0011 31.8 11.2 50 160-211 201-258 (356)
161 4h3d_A 3-dehydroquinate dehydr 71.9 40 0.0014 29.8 11.3 102 163-269 102-210 (258)
162 3inp_A D-ribulose-phosphate 3- 71.8 12 0.00042 33.0 7.8 50 163-212 43-97 (246)
163 4fxs_A Inosine-5'-monophosphat 71.7 32 0.0011 33.4 11.5 66 163-240 233-299 (496)
164 2r8w_A AGR_C_1641P; APC7498, d 71.2 62 0.0021 29.6 23.6 198 52-325 53-259 (332)
165 1p0k_A Isopentenyl-diphosphate 71.1 62 0.0021 29.5 13.5 95 162-266 75-184 (349)
166 3ffs_A Inosine-5-monophosphate 70.9 25 0.00085 33.3 10.2 66 163-241 146-212 (400)
167 4ed9_A CAIB/BAIF family protei 70.9 8.7 0.0003 36.3 7.0 56 50-137 82-137 (385)
168 2nuw_A 2-keto-3-deoxygluconate 70.3 59 0.002 29.0 13.1 105 52-206 18-128 (288)
169 3ubm_A COAT2, formyl-COA:oxala 69.9 11 0.00037 36.5 7.6 71 50-160 100-170 (456)
170 3tr9_A Dihydropteroate synthas 69.5 68 0.0023 29.3 14.2 160 125-320 27-217 (314)
171 4hb7_A Dihydropteroate synthas 69.2 63 0.0022 28.8 13.0 118 125-271 6-136 (270)
172 1gte_A Dihydropyrimidine dehyd 68.4 46 0.0016 35.4 12.7 88 195-305 628-731 (1025)
173 2eja_A URO-D, UPD, uroporphyri 68.1 70 0.0024 28.9 17.2 135 161-327 180-335 (338)
174 1vzw_A Phosphoribosyl isomeras 67.8 39 0.0013 28.9 10.3 138 163-323 35-188 (244)
175 1geq_A Tryptophan synthase alp 67.6 58 0.002 27.9 11.4 90 163-265 98-196 (248)
176 3rpd_A Methionine synthase (B1 67.5 28 0.00096 32.3 9.7 146 155-314 166-329 (357)
177 3iv3_A Tagatose 1,6-diphosphat 67.5 77 0.0026 29.2 14.6 128 166-312 116-281 (332)
178 4ab4_A Xenobiotic reductase B; 67.4 27 0.00094 32.5 9.6 68 249-324 207-278 (362)
179 3si9_A DHDPS, dihydrodipicolin 67.4 73 0.0025 28.9 22.9 153 53-254 42-198 (315)
180 2yr1_A 3-dehydroquinate dehydr 67.0 47 0.0016 29.2 10.7 102 162-269 102-209 (257)
181 4e38_A Keto-hydroxyglutarate-a 66.9 33 0.0011 29.9 9.5 102 163-305 96-198 (232)
182 2ztj_A Homocitrate synthase; ( 66.7 83 0.0029 29.3 16.0 135 52-231 76-213 (382)
183 3emz_A Xylanase, endo-1,4-beta 66.6 42 0.0014 30.8 10.6 48 160-209 187-241 (331)
184 3r89_A Orotidine 5'-phosphate 66.6 28 0.00097 31.5 9.2 159 154-325 41-218 (290)
185 3gka_A N-ethylmaleimide reduct 66.6 29 0.00099 32.4 9.6 69 248-324 214-286 (361)
186 2qiw_A PEP phosphonomutase; st 66.4 69 0.0023 28.2 11.8 97 163-265 96-209 (255)
187 1xky_A Dihydrodipicolinate syn 66.4 74 0.0025 28.6 19.7 151 52-253 31-186 (301)
188 1w1z_A Delta-aminolevulinic ac 66.4 79 0.0027 28.9 15.8 223 53-306 63-315 (328)
189 3ndo_A Deoxyribose-phosphate a 66.3 26 0.0009 30.6 8.6 26 52-77 144-170 (231)
190 1ep3_A Dihydroorotate dehydrog 66.1 68 0.0023 28.4 11.9 83 201-306 98-193 (311)
191 2r14_A Morphinone reductase; H 66.0 32 0.0011 32.2 9.8 15 66-80 53-67 (377)
192 1tv5_A Dhodehase, dihydroorota 65.8 84 0.0029 30.1 12.9 99 201-325 296-421 (443)
193 3flu_A DHDPS, dihydrodipicolin 65.5 76 0.0026 28.4 22.9 151 53-253 27-181 (297)
194 3ivs_A Homocitrate synthase, m 65.0 97 0.0033 29.5 13.8 64 161-231 181-247 (423)
195 3bg3_A Pyruvate carboxylase, m 65.0 1.2E+02 0.0043 30.8 14.6 157 153-325 122-300 (718)
196 3tml_A 2-dehydro-3-deoxyphosph 64.7 81 0.0028 28.4 12.9 157 49-268 26-204 (288)
197 1vhc_A Putative KHG/KDPG aldol 64.5 69 0.0023 27.5 14.0 79 163-264 79-161 (224)
198 3qfe_A Putative dihydrodipicol 64.4 83 0.0029 28.5 22.7 152 53-254 31-190 (318)
199 1y0e_A Putative N-acetylmannos 64.3 56 0.0019 27.4 10.4 87 163-265 78-180 (223)
200 1u1j_A 5-methyltetrahydroptero 63.8 51 0.0017 33.9 11.6 133 155-313 181-331 (765)
201 3daq_A DHDPS, dihydrodipicolin 63.3 83 0.0028 28.1 17.8 150 52-251 21-174 (292)
202 3hgj_A Chromate reductase; TIM 63.2 34 0.0011 31.5 9.3 27 54-80 37-63 (349)
203 2ehh_A DHDPS, dihydrodipicolin 63.1 83 0.0029 28.0 23.0 153 52-254 19-176 (294)
204 1z41_A YQJM, probable NADH-dep 62.6 91 0.0031 28.3 21.5 111 152-265 133-282 (338)
205 3bg3_A Pyruvate carboxylase, m 62.6 1.4E+02 0.0048 30.5 16.1 103 163-268 200-313 (718)
206 2qjg_A Putative aldolase MJ040 62.6 78 0.0027 27.5 14.0 143 163-324 48-201 (273)
207 4avf_A Inosine-5'-monophosphat 62.4 56 0.0019 31.6 11.1 66 163-240 231-297 (490)
208 1yxy_A Putative N-acetylmannos 62.2 72 0.0025 27.0 14.9 94 163-267 39-140 (234)
209 1h5y_A HISF; histidine biosynt 62.1 15 0.00051 31.4 6.4 98 165-265 91-203 (253)
210 1qop_A Tryptophan synthase alp 62.1 54 0.0018 28.8 10.2 91 163-258 34-146 (268)
211 2qgh_A Diaminopimelate decarbo 62.0 57 0.0019 30.6 10.9 76 165-243 116-205 (425)
212 1ep3_A Dihydroorotate dehydrog 61.9 85 0.0029 27.7 14.4 70 162-240 113-195 (311)
213 3nvt_A 3-deoxy-D-arabino-heptu 61.6 1.1E+02 0.0036 28.8 15.6 105 163-303 159-277 (385)
214 3mcm_A 2-amino-4-hydroxy-6-hyd 61.6 1.2E+02 0.0039 29.2 13.2 154 124-303 189-358 (442)
215 1o94_A Tmadh, trimethylamine d 61.6 91 0.0031 31.5 13.1 48 156-209 39-105 (729)
216 3gr7_A NADPH dehydrogenase; fl 61.1 35 0.0012 31.4 9.0 21 54-74 39-59 (340)
217 3eb2_A Putative dihydrodipicol 61.1 92 0.0032 27.9 19.9 152 52-255 23-180 (300)
218 3d0c_A Dihydrodipicolinate syn 60.9 96 0.0033 28.0 23.0 192 52-325 31-231 (314)
219 1jcn_A Inosine monophosphate d 60.9 1.2E+02 0.0042 29.2 15.3 90 163-265 257-363 (514)
220 1u83_A Phosphosulfolactate syn 60.7 10 0.00035 34.1 4.9 121 171-306 63-189 (276)
221 3cpr_A Dihydrodipicolinate syn 60.7 95 0.0032 27.9 22.7 151 52-253 35-190 (304)
222 2inf_A URO-D, UPD, uroporphyri 60.6 52 0.0018 30.1 10.2 25 165-189 257-281 (359)
223 1wa3_A 2-keto-3-deoxy-6-phosph 60.5 71 0.0024 26.4 11.7 79 165-264 75-154 (205)
224 3tak_A DHDPS, dihydrodipicolin 60.5 92 0.0032 27.7 24.1 152 52-254 20-176 (291)
225 3a5f_A Dihydrodipicolinate syn 60.4 93 0.0032 27.7 20.3 152 52-254 20-176 (291)
226 3s5o_A 4-hydroxy-2-oxoglutarat 60.3 97 0.0033 27.8 17.3 151 53-253 34-190 (307)
227 1xk7_A Crotonobetainyl-COA:car 60.0 18 0.00061 34.4 6.9 40 50-94 76-115 (408)
228 1f6k_A N-acetylneuraminate lya 60.0 94 0.0032 27.7 18.5 151 52-253 22-178 (293)
229 2gou_A Oxidoreductase, FMN-bin 60.0 70 0.0024 29.6 11.0 16 66-81 49-64 (365)
230 3k30_A Histamine dehydrogenase 60.0 1.4E+02 0.0049 29.7 14.9 50 154-209 42-110 (690)
231 1tqx_A D-ribulose-5-phosphate 59.8 56 0.0019 28.2 9.6 90 163-252 21-134 (227)
232 1qpo_A Quinolinate acid phosph 59.8 21 0.00072 32.2 7.0 66 164-242 205-270 (284)
233 4exq_A UPD, URO-D, uroporphyri 59.8 1.1E+02 0.0037 28.3 12.9 135 163-326 200-357 (368)
234 2gzm_A Glutamate racemase; enz 59.8 90 0.0031 27.3 11.6 149 153-324 45-198 (267)
235 3qze_A DHDPS, dihydrodipicolin 59.8 1E+02 0.0034 27.9 23.8 150 53-253 43-197 (314)
236 2nu8_B SCS-beta, succinyl-COA 59.1 71 0.0024 29.9 10.9 68 152-231 292-363 (388)
237 2g04_A Probable fatty-acid-COA 58.9 11 0.00038 35.2 5.1 54 50-137 65-118 (359)
238 1vli_A Spore coat polysacchari 58.8 1.2E+02 0.0041 28.5 16.7 93 163-268 124-225 (385)
239 3cyv_A URO-D, UPD, uroporphyri 58.8 1.1E+02 0.0036 27.9 13.9 142 157-326 184-347 (354)
240 2wkj_A N-acetylneuraminate lya 58.7 1E+02 0.0035 27.6 18.9 152 52-253 30-186 (303)
241 2y88_A Phosphoribosyl isomeras 58.7 47 0.0016 28.3 9.0 80 163-256 34-121 (244)
242 1ur1_A Endoxylanase; hydrolase 58.7 21 0.00073 33.4 7.1 50 160-211 209-266 (378)
243 1zlp_A PSR132, petal death pro 58.5 1.1E+02 0.0038 27.9 16.0 97 164-268 120-233 (318)
244 3oa3_A Aldolase; structural ge 58.3 46 0.0016 30.0 9.0 27 50-77 185-212 (288)
245 3fgn_A Dethiobiotin synthetase 58.3 42 0.0014 29.4 8.7 119 153-300 111-242 (251)
246 3khj_A Inosine-5-monophosphate 58.3 58 0.002 30.2 10.1 88 164-265 60-150 (361)
247 4gj1_A 1-(5-phosphoribosyl)-5- 58.3 86 0.0029 27.2 10.7 101 163-266 87-202 (243)
248 3r2g_A Inosine 5'-monophosphat 58.2 1E+02 0.0034 28.7 11.6 66 162-240 101-168 (361)
249 1jcn_A Inosine monophosphate d 58.1 1.4E+02 0.0046 28.8 15.2 65 164-242 308-388 (514)
250 3zwt_A Dihydroorotate dehydrog 58.0 1.2E+02 0.004 28.2 13.7 139 160-325 164-346 (367)
251 1pii_A N-(5'phosphoribosyl)ant 58.0 1.3E+02 0.0046 28.8 13.3 137 165-323 122-274 (452)
252 3fkr_A L-2-keto-3-deoxyarabona 57.7 1.1E+02 0.0037 27.6 20.1 152 52-254 27-187 (309)
253 1ps9_A 2,4-dienoyl-COA reducta 57.6 1.5E+02 0.0053 29.4 18.7 112 152-265 130-285 (671)
254 1qo2_A Molecule: N-((5-phospho 57.5 44 0.0015 28.6 8.6 96 165-265 87-193 (241)
255 1rpx_A Protein (ribulose-phosp 57.5 62 0.0021 27.4 9.5 85 163-258 26-117 (230)
256 2d1z_A Endo-1,4-beta-D-xylanas 57.2 22 0.00074 33.8 7.1 50 160-211 183-240 (436)
257 2wqp_A Polysialic acid capsule 57.1 1.2E+02 0.0042 28.0 13.5 154 50-269 31-215 (349)
258 4af0_A Inosine-5'-monophosphat 56.9 91 0.0031 30.8 11.4 122 51-242 278-414 (556)
259 2vjq_A Formyl-coenzyme A trans 56.7 25 0.00087 33.6 7.4 40 50-94 74-113 (428)
260 2yxb_A Coenzyme B12-dependent 55.9 51 0.0017 26.7 8.2 45 220-265 56-105 (161)
261 1r3s_A URO-D, uroporphyrinogen 55.8 1.2E+02 0.0042 27.7 14.9 138 161-326 198-359 (367)
262 1r85_A Endo-1,4-beta-xylanase; 55.2 25 0.00087 32.9 7.0 50 160-211 212-269 (379)
263 2gou_A Oxidoreductase, FMN-bin 55.1 1.3E+02 0.0044 27.7 12.9 112 152-265 150-298 (365)
264 2o0t_A Diaminopimelate decarbo 55.0 80 0.0028 30.1 10.8 75 166-243 125-215 (467)
265 1to3_A Putative aldolase YIHT; 55.0 1.1E+02 0.0037 27.6 11.0 44 161-205 178-226 (304)
266 3nav_A Tryptophan synthase alp 54.8 69 0.0024 28.5 9.5 124 162-323 36-172 (271)
267 3fs2_A 2-dehydro-3-deoxyphosph 54.7 1.2E+02 0.0042 27.3 16.3 157 49-268 50-222 (298)
268 2vp8_A Dihydropteroate synthas 54.7 1.3E+02 0.0043 27.5 12.2 117 125-271 41-171 (318)
269 3tsm_A IGPS, indole-3-glycerol 54.4 47 0.0016 29.7 8.3 64 165-243 134-198 (272)
270 2y5s_A DHPS, dihydropteroate s 54.2 1.2E+02 0.0042 27.2 11.7 149 125-304 22-186 (294)
271 3sz8_A 2-dehydro-3-deoxyphosph 53.9 1.2E+02 0.0042 27.1 16.8 159 49-269 29-204 (285)
272 3r12_A Deoxyribose-phosphate a 53.8 50 0.0017 29.3 8.3 27 50-77 170-197 (260)
273 1oy0_A Ketopantoate hydroxymet 53.5 15 0.00051 33.2 4.8 36 164-205 183-218 (281)
274 1ydo_A HMG-COA lyase; TIM-barr 53.2 1.3E+02 0.0044 27.1 13.5 96 165-267 86-208 (307)
275 1rd5_A Tryptophan synthase alp 53.0 1.1E+02 0.0038 26.4 11.8 24 245-268 79-104 (262)
276 2csu_A 457AA long hypothetical 53.0 1.2E+02 0.0042 28.8 11.7 84 161-257 355-446 (457)
277 1l6s_A Porphobilinogen synthas 53.0 1.4E+02 0.0046 27.3 16.3 223 54-306 58-308 (323)
278 1r3s_A URO-D, uroporphyrinogen 52.9 1.4E+02 0.0047 27.3 12.5 82 166-257 269-359 (367)
279 1w8s_A FBP aldolase, fructose- 52.7 1.2E+02 0.0041 26.6 12.4 136 165-324 97-247 (263)
280 3paj_A Nicotinate-nucleotide p 52.7 44 0.0015 30.7 7.9 62 165-242 243-304 (320)
281 1vyr_A Pentaerythritol tetrani 52.6 99 0.0034 28.6 10.6 9 66-74 49-57 (364)
282 1j93_A UROD, uroporphyrinogen 52.6 41 0.0014 30.8 7.9 23 167-189 261-283 (353)
283 3ist_A Glutamate racemase; str 52.6 45 0.0015 29.6 7.9 31 153-183 47-79 (269)
284 3l0g_A Nicotinate-nucleotide p 52.5 24 0.00082 32.1 6.1 63 164-242 218-280 (300)
285 1h7n_A 5-aminolaevulinic acid 52.3 1.4E+02 0.0049 27.4 19.5 225 53-306 68-326 (342)
286 3l21_A DHDPS, dihydrodipicolin 52.0 1.3E+02 0.0045 26.9 19.1 150 52-252 34-188 (304)
287 2yv4_A Hypothetical protein PH 51.9 30 0.001 26.2 5.7 46 154-199 53-98 (105)
288 2z6i_A Trans-2-enoyl-ACP reduc 51.7 1.3E+02 0.0044 27.2 11.1 88 165-266 28-116 (332)
289 3b8i_A PA4872 oxaloacetate dec 51.6 1.3E+02 0.0046 26.9 14.4 95 164-267 101-211 (287)
290 2rfg_A Dihydrodipicolinate syn 51.2 1.3E+02 0.0046 26.7 22.1 150 52-251 19-172 (297)
291 3ctl_A D-allulose-6-phosphate 51.1 62 0.0021 28.0 8.4 48 163-212 16-68 (231)
292 3igs_A N-acetylmannosamine-6-p 50.8 1.2E+02 0.0041 26.0 16.9 92 162-265 38-134 (232)
293 1ypx_A Putative vitamin-B12 in 50.8 79 0.0027 29.4 9.7 144 155-313 162-337 (375)
294 3na8_A Putative dihydrodipicol 50.6 1.4E+02 0.0049 26.9 22.6 151 52-253 43-199 (315)
295 2fp4_B Succinyl-COA ligase [GD 50.4 72 0.0025 30.0 9.4 66 153-231 300-370 (395)
296 3i65_A Dihydroorotate dehydrog 50.0 95 0.0033 29.5 10.1 83 202-305 182-299 (415)
297 1n82_A Xylanase, intra-cellula 50.0 37 0.0013 31.0 7.2 51 159-211 187-245 (331)
298 2ztj_A Homocitrate synthase; ( 49.9 1.6E+02 0.0055 27.3 14.5 95 166-268 80-197 (382)
299 2b7n_A Probable nicotinate-nuc 49.8 34 0.0012 30.4 6.7 58 170-240 199-256 (273)
300 1s2w_A Phosphoenolpyruvate pho 49.7 1.5E+02 0.005 26.7 18.6 101 164-269 98-218 (295)
301 1yxy_A Putative N-acetylmannos 49.0 56 0.0019 27.7 7.8 89 163-265 91-191 (234)
302 2v9d_A YAGE; dihydrodipicolini 49.0 1.6E+02 0.0054 26.9 24.7 154 52-255 50-208 (343)
303 1wbh_A KHG/KDPG aldolase; lyas 48.9 1.2E+02 0.0042 25.6 14.7 110 163-316 78-192 (214)
304 3i65_A Dihydroorotate dehydrog 48.9 1.8E+02 0.0061 27.5 14.1 141 158-325 197-393 (415)
305 1b73_A Glutamate racemase; iso 48.8 92 0.0031 27.0 9.3 148 153-322 42-190 (254)
306 2w5f_A Endo-1,4-beta-xylanase 48.5 47 0.0016 32.6 8.0 51 159-211 393-453 (540)
307 3ru6_A Orotidine 5'-phosphate 48.3 50 0.0017 30.0 7.6 97 165-270 95-201 (303)
308 1i4n_A Indole-3-glycerol phosp 48.3 81 0.0028 27.7 8.8 64 165-243 115-180 (251)
309 1vrd_A Inosine-5'-monophosphat 48.3 1.9E+02 0.0064 27.6 15.3 62 166-240 292-368 (494)
310 2zbt_A Pyridoxal biosynthesis 48.2 43 0.0015 29.8 7.2 62 163-241 90-152 (297)
311 1zuw_A Glutamate racemase 1; ( 48.2 1.4E+02 0.0048 26.1 14.7 145 153-324 45-199 (272)
312 1ccw_A Protein (glutamate muta 48.1 96 0.0033 24.2 8.7 19 169-187 27-45 (137)
313 1w32_A Endo-1,4-beta-xylanase 48.0 35 0.0012 31.5 6.6 50 160-211 192-251 (348)
314 3k30_A Histamine dehydrogenase 48.0 1.8E+02 0.0062 29.0 12.5 113 151-265 144-299 (690)
315 2gjl_A Hypothetical protein PA 47.7 1.6E+02 0.0053 26.5 11.7 84 163-265 86-177 (328)
316 2jbm_A Nicotinate-nucleotide p 47.6 42 0.0014 30.4 7.0 63 166-241 210-272 (299)
317 3dz1_A Dihydrodipicolinate syn 47.6 1.6E+02 0.0054 26.5 17.8 150 53-255 28-186 (313)
318 1xg4_A Probable methylisocitra 47.4 1.6E+02 0.0054 26.5 12.0 98 164-269 98-212 (295)
319 3eoo_A Methylisocitrate lyase; 47.4 1.6E+02 0.0055 26.5 12.7 98 164-269 102-216 (298)
320 3rys_A Adenosine deaminase 1; 47.2 1.7E+02 0.0058 26.7 15.7 140 154-323 75-240 (343)
321 1o60_A 2-dehydro-3-deoxyphosph 47.0 1.6E+02 0.0054 26.4 11.5 91 165-267 101-200 (292)
322 4dpp_A DHDPS 2, dihydrodipicol 47.0 1.8E+02 0.0061 27.0 14.7 46 53-104 79-125 (360)
323 3m47_A Orotidine 5'-phosphate 46.6 44 0.0015 28.8 6.7 35 165-199 83-117 (228)
324 3sy1_A UPF0001 protein YGGS; e 46.4 49 0.0017 28.9 7.1 67 174-243 98-167 (245)
325 3vni_A Xylose isomerase domain 46.2 1.2E+02 0.0041 26.1 9.7 105 156-269 128-248 (294)
326 3ble_A Citramalate synthase fr 46.0 95 0.0032 28.3 9.3 95 165-268 101-221 (337)
327 2qf7_A Pyruvate carboxylase pr 46.0 3E+02 0.01 29.6 14.4 86 234-326 658-749 (1165)
328 1pv8_A Delta-aminolevulinic ac 46.0 12 0.0004 34.5 2.8 25 50-74 294-318 (330)
329 3niy_A Endo-1,4-beta-xylanase; 45.9 1.8E+02 0.0061 26.6 11.4 48 160-209 203-257 (341)
330 1pv8_A Delta-aminolevulinic ac 45.7 1.8E+02 0.0061 26.6 14.0 226 53-306 58-315 (330)
331 1f6y_A 5-methyltetrahydrofolat 45.7 1.6E+02 0.0053 25.9 14.8 92 163-268 28-124 (262)
332 1xyz_A 1,4-beta-D-xylan-xylano 45.6 1.3E+02 0.0044 27.5 10.1 49 160-210 209-267 (347)
333 2ekc_A AQ_1548, tryptophan syn 45.2 88 0.003 27.3 8.6 91 163-258 34-146 (262)
334 2agk_A 1-(5-phosphoribosyl)-5- 45.2 49 0.0017 29.1 6.9 75 164-256 42-126 (260)
335 1w1z_A Delta-aminolevulinic ac 45.0 12 0.00042 34.2 2.8 25 50-74 294-318 (328)
336 2y88_A Phosphoribosyl isomeras 45.0 32 0.0011 29.4 5.6 99 164-270 87-201 (244)
337 2gjl_A Hypothetical protein PA 44.7 1.7E+02 0.0059 26.1 11.9 94 164-266 30-124 (328)
338 3lye_A Oxaloacetate acetyl hyd 44.6 1.8E+02 0.0062 26.3 14.8 93 164-265 107-220 (307)
339 1x1o_A Nicotinate-nucleotide p 44.6 76 0.0026 28.5 8.1 60 165-240 208-267 (286)
340 3l5l_A Xenobiotic reductase A; 44.6 1.9E+02 0.0065 26.5 16.7 111 152-265 147-300 (363)
341 1h7n_A 5-aminolaevulinic acid 44.4 12 0.00042 34.5 2.7 25 50-74 305-329 (342)
342 3nvt_A 3-deoxy-D-arabino-heptu 44.3 2E+02 0.0069 26.8 13.0 28 50-77 152-179 (385)
343 1l6s_A Porphobilinogen synthas 44.2 12 0.00042 34.2 2.7 25 50-74 287-311 (323)
344 1mzh_A Deoxyribose-phosphate a 44.1 1.5E+02 0.0051 25.2 10.5 80 233-325 82-173 (225)
345 3uhf_A Glutamate racemase; str 44.1 50 0.0017 29.5 6.8 28 153-180 66-93 (274)
346 3r79_A Uncharacterized protein 43.8 1.3E+02 0.0044 26.2 9.4 67 174-243 98-167 (244)
347 2hsa_B 12-oxophytodienoate red 43.7 74 0.0025 29.9 8.3 49 248-302 224-273 (402)
348 1i1w_A Endo-1,4-beta-xylanase; 43.6 55 0.0019 29.4 7.2 50 160-211 185-241 (303)
349 1o4u_A Type II quinolic acid p 43.6 50 0.0017 29.7 6.7 66 164-242 204-269 (285)
350 3obk_A Delta-aminolevulinic ac 43.4 2E+02 0.0069 26.5 16.0 228 53-307 72-330 (356)
351 1vli_A Spore coat polysacchari 43.4 2.1E+02 0.0072 26.8 12.4 128 124-303 27-185 (385)
352 3ixl_A Amdase, arylmalonate de 43.4 1.6E+02 0.0054 25.3 12.7 149 152-324 42-204 (240)
353 3vnd_A TSA, tryptophan synthas 43.1 1E+02 0.0036 27.2 8.8 124 162-323 34-170 (267)
354 3b4u_A Dihydrodipicolinate syn 42.9 1.8E+02 0.0061 25.8 21.2 154 52-254 22-184 (294)
355 3r2g_A Inosine 5'-monophosphat 42.9 1.2E+02 0.0042 28.1 9.5 27 50-76 95-121 (361)
356 3hbl_A Pyruvate carboxylase; T 42.8 3.5E+02 0.012 29.1 15.4 64 160-230 692-758 (1150)
357 2r14_A Morphinone reductase; H 42.6 2.1E+02 0.0071 26.5 11.7 109 156-265 162-304 (377)
358 2dqw_A Dihydropteroate synthas 42.5 1.9E+02 0.0065 26.0 12.7 121 125-271 28-158 (294)
359 1ypx_A Putative vitamin-B12 in 42.5 64 0.0022 30.0 7.6 19 164-182 255-274 (375)
360 3obk_A Delta-aminolevulinic ac 42.1 14 0.00049 34.1 2.8 25 50-74 308-332 (356)
361 3of5_A Dethiobiotin synthetase 41.9 42 0.0014 28.7 5.8 102 153-267 94-206 (228)
362 1o5k_A DHDPS, dihydrodipicolin 41.9 1.9E+02 0.0065 25.8 25.2 154 52-255 31-189 (306)
363 3tha_A Tryptophan synthase alp 41.5 1.5E+02 0.0053 25.9 9.5 91 162-265 105-204 (252)
364 3tqv_A Nicotinate-nucleotide p 41.5 48 0.0016 29.9 6.2 63 164-242 209-271 (287)
365 3lab_A Putative KDPG (2-keto-3 41.2 1.7E+02 0.0058 25.1 16.7 153 50-305 21-183 (217)
366 3ajx_A 3-hexulose-6-phosphate 41.1 1.5E+02 0.0051 24.3 14.5 64 166-240 70-133 (207)
367 1jvn_A Glutamine, bifunctional 41.0 74 0.0025 31.3 8.1 100 163-265 350-501 (555)
368 3u43_A Colicin-E2 immunity pro 40.7 16 0.00056 27.3 2.5 47 243-302 28-79 (94)
369 3eeg_A 2-isopropylmalate synth 40.6 2.1E+02 0.0071 25.9 16.6 138 163-325 31-190 (325)
370 2og9_A Mandelate racemase/muco 40.6 1.9E+02 0.0064 26.7 10.6 145 163-317 167-324 (393)
371 1t7l_A 5-methyltetrahydroptero 40.5 2.1E+02 0.0072 29.4 11.5 136 155-313 584-739 (766)
372 4f2d_A L-arabinose isomerase; 40.4 2.3E+02 0.0077 27.5 11.4 42 154-195 23-67 (500)
373 3cpg_A Uncharacterized protein 40.1 57 0.002 28.8 6.6 67 174-243 135-204 (282)
374 3n2b_A Diaminopimelate decarbo 40.0 1.9E+02 0.0066 27.2 10.8 75 166-243 136-224 (441)
375 2jfq_A Glutamate racemase; cel 40.0 1.9E+02 0.0066 25.5 10.2 28 153-180 64-91 (286)
376 3ctl_A D-allulose-6-phosphate 40.0 50 0.0017 28.6 6.0 39 165-208 72-113 (231)
377 3m0z_A Putative aldolase; MCSG 39.9 1E+02 0.0035 26.9 7.7 87 221-326 146-246 (249)
378 2wlt_A L-asparaginase; hydrola 39.8 71 0.0024 29.2 7.3 50 164-215 233-285 (332)
379 1ka9_F Imidazole glycerol phos 39.6 1.7E+02 0.0059 24.7 11.0 81 163-255 34-121 (252)
380 1gte_A Dihydropyrimidine dehyd 39.3 2.4E+02 0.0082 29.7 12.3 71 161-240 649-734 (1025)
381 1w5q_A Delta-aminolevulinic ac 39.3 17 0.00059 33.4 2.9 24 50-74 301-324 (337)
382 1geq_A Tryptophan synthase alp 39.3 1.8E+02 0.006 24.7 13.1 89 162-257 21-131 (248)
383 1v0l_A Endo-1,4-beta-xylanase 39.1 36 0.0012 30.9 5.1 50 160-211 183-240 (313)
384 1tv5_A Dhodehase, dihydroorota 39.1 2.1E+02 0.0072 27.2 10.8 20 287-306 309-328 (443)
385 1us2_A Xylanase10C, endo-beta- 39.0 58 0.002 32.0 6.9 50 160-211 360-417 (530)
386 3iwp_A Copper homeostasis prot 38.7 2.2E+02 0.0074 25.6 15.4 167 50-271 46-218 (287)
387 3e96_A Dihydrodipicolinate syn 38.6 2.2E+02 0.0075 25.5 17.4 109 52-207 31-143 (316)
388 1fob_A Beta-1,4-galactanase; B 38.3 1.6E+02 0.0054 26.7 9.5 109 156-269 108-248 (334)
389 4f8x_A Endo-1,4-beta-xylanase; 38.2 79 0.0027 29.0 7.4 122 52-209 102-246 (335)
390 3ih1_A Methylisocitrate lyase; 38.2 2.3E+02 0.0077 25.6 12.6 95 164-268 108-219 (305)
391 1rd5_A Tryptophan synthase alp 38.0 1.9E+02 0.0066 24.8 17.3 45 162-207 34-100 (262)
392 2p10_A MLL9387 protein; putati 38.0 1.4E+02 0.0047 26.9 8.6 80 21-107 131-224 (286)
393 3txv_A Probable tagatose 6-pho 38.0 1.6E+02 0.0056 28.2 9.6 85 222-313 8-98 (450)
394 1qwg_A PSL synthase;, (2R)-pho 37.6 1.1E+02 0.0037 27.0 7.7 121 171-305 36-164 (251)
395 3gnn_A Nicotinate-nucleotide p 37.3 94 0.0032 28.1 7.5 62 165-242 221-282 (298)
396 1eix_A Orotidine 5'-monophosph 37.2 1E+02 0.0035 26.6 7.7 127 166-306 85-218 (245)
397 4exq_A UPD, URO-D, uroporphyri 37.2 1.7E+02 0.0057 27.0 9.6 83 166-258 266-358 (368)
398 2xed_A Putative maleate isomer 36.9 2.1E+02 0.0073 25.0 10.9 150 153-324 67-232 (273)
399 3sig_A PArg, poly(ADP-ribose) 36.9 1.3E+02 0.0045 26.8 8.4 67 90-182 189-258 (277)
400 2jfz_A Glutamate racemase; cel 36.6 92 0.0031 27.0 7.3 49 153-205 42-90 (255)
401 3bo9_A Putative nitroalkan dio 36.5 2.4E+02 0.0081 25.3 10.9 74 164-246 41-114 (326)
402 3u7b_A Endo-1,4-beta-xylanase; 36.1 85 0.0029 28.6 7.2 48 160-209 184-246 (327)
403 1rpx_A Protein (ribulose-phosp 36.1 66 0.0023 27.2 6.2 43 164-209 82-126 (230)
404 4gxw_A Adenosine deaminase; am 36.0 2.7E+02 0.0092 25.8 12.3 175 49-269 87-268 (380)
405 3m5v_A DHDPS, dihydrodipicolin 35.9 2.3E+02 0.008 25.1 24.8 153 53-254 27-184 (301)
406 1p1p_A AA-conotoxin PIVA; neur 35.7 10 0.00035 20.8 0.5 8 308-315 1-8 (26)
407 3nl6_A Thiamine biosynthetic b 35.5 1.4E+02 0.0047 29.3 9.0 148 162-322 27-192 (540)
408 3gr7_A NADPH dehydrogenase; fl 35.3 2.6E+02 0.0088 25.4 18.5 149 152-324 133-324 (340)
409 2pp0_A L-talarate/galactarate 35.2 2.3E+02 0.0079 26.2 10.3 145 163-317 180-337 (398)
410 3pao_A Adenosine deaminase; st 35.1 2.5E+02 0.0087 25.3 14.0 140 154-323 72-237 (326)
411 1rvk_A Isomerase/lactonizing e 35.1 2.6E+02 0.009 25.4 11.9 138 163-313 154-314 (382)
412 3out_A Glutamate racemase; str 35.0 1E+02 0.0035 27.2 7.4 28 153-180 49-76 (268)
413 3tjx_A Dihydroorotate dehydrog 34.9 2.1E+02 0.007 26.0 9.8 57 201-266 126-199 (354)
414 1tqj_A Ribulose-phosphate 3-ep 34.9 81 0.0028 27.0 6.5 87 165-265 77-178 (230)
415 3pao_A Adenosine deaminase; st 34.7 2.6E+02 0.0088 25.3 10.4 175 48-269 68-247 (326)
416 3l5l_A Xenobiotic reductase A; 34.6 48 0.0016 30.7 5.3 28 54-81 36-63 (363)
417 3m6y_A 4-hydroxy-2-oxoglutarat 34.6 98 0.0034 27.3 6.8 87 221-326 169-269 (275)
418 3usb_A Inosine-5'-monophosphat 34.5 3.2E+02 0.011 26.3 12.8 66 163-240 258-324 (511)
419 3rpd_A Methionine synthase (B1 34.4 2.8E+02 0.0094 25.5 10.5 22 163-184 249-270 (357)
420 3gka_A N-ethylmaleimide reduct 34.3 2.3E+02 0.008 26.0 10.0 107 155-265 156-292 (361)
421 2wqp_A Polysialic acid capsule 34.3 2.8E+02 0.0096 25.5 14.7 116 163-314 38-187 (349)
422 3qxc_A Dethiobiotin synthetase 34.3 1.3E+02 0.0045 25.9 7.9 79 153-246 116-202 (242)
423 4af0_A Inosine-5'-monophosphat 34.3 1.9E+02 0.0065 28.5 9.6 47 163-209 283-330 (556)
424 3vav_A 3-methyl-2-oxobutanoate 34.1 2.5E+02 0.0086 25.0 15.2 92 166-266 112-214 (275)
425 3kru_A NADH:flavin oxidoreduct 34.1 2.7E+02 0.0093 25.3 18.6 111 152-265 132-282 (343)
426 2vvt_A Glutamate racemase; iso 34.1 1.2E+02 0.0041 26.9 7.8 30 153-182 66-95 (290)
427 4dnh_A Uncharacterized protein 33.9 2.9E+02 0.0098 25.5 11.4 128 87-245 90-236 (396)
428 3o63_A Probable thiamine-phosp 33.9 2.3E+02 0.0079 24.5 9.6 19 162-180 45-63 (243)
429 3ovp_A Ribulose-phosphate 3-ep 33.9 1.6E+02 0.0053 25.2 8.2 39 166-209 80-120 (228)
430 3cyv_A URO-D, UPD, uroporphyri 33.7 96 0.0033 28.2 7.3 26 165-190 255-280 (354)
431 3bo9_A Putative nitroalkan dio 33.4 2.7E+02 0.0091 25.0 11.9 25 295-321 117-141 (326)
432 1eep_A Inosine 5'-monophosphat 33.3 1.8E+02 0.0061 27.0 9.2 41 224-265 156-199 (404)
433 3rys_A Adenosine deaminase 1; 33.2 2.8E+02 0.0096 25.2 11.7 173 48-268 71-249 (343)
434 2wx4_A DCP1, decapping protein 32.8 13 0.00045 23.9 0.7 17 50-66 23-39 (46)
435 3hdg_A Uncharacterized protein 32.7 1.4E+02 0.005 21.8 8.2 77 169-257 47-124 (137)
436 2p10_A MLL9387 protein; putati 32.7 2.2E+02 0.0075 25.6 9.0 18 163-180 173-190 (286)
437 3h5d_A DHDPS, dihydrodipicolin 32.7 2.7E+02 0.0093 24.9 18.0 139 53-244 27-171 (311)
438 3vab_A Diaminopimelate decarbo 32.7 3.2E+02 0.011 25.7 11.9 73 168-243 135-221 (443)
439 2ze3_A DFA0005; organic waste 32.6 2.6E+02 0.0089 24.7 13.6 96 164-265 96-209 (275)
440 1lc0_A Biliverdin reductase A; 32.6 75 0.0026 28.1 6.1 46 161-209 77-124 (294)
441 1o7j_A L-asparaginase; atomic 32.5 77 0.0026 28.9 6.3 51 164-216 232-285 (327)
442 2rdx_A Mandelate racemase/muco 32.4 1.8E+02 0.0062 26.6 9.0 38 233-270 159-199 (379)
443 4ew6_A D-galactose-1-dehydroge 32.4 61 0.0021 29.2 5.6 44 162-208 94-139 (330)
444 1fr2_A Colicin E9 immunity pro 32.4 28 0.00094 25.6 2.5 43 246-301 31-77 (86)
445 3u3x_A Oxidoreductase; structu 32.3 76 0.0026 29.0 6.3 45 161-208 100-146 (361)
446 4djd_C C/Fe-SP, corrinoid/iron 32.3 2.5E+02 0.0086 26.8 9.9 83 172-268 126-209 (446)
447 3tqv_A Nicotinate-nucleotide p 31.9 2.8E+02 0.0096 24.8 10.8 54 190-256 187-240 (287)
448 3o9z_A Lipopolysaccaride biosy 31.9 59 0.002 29.1 5.3 36 162-198 85-122 (312)
449 1a0c_A Xylose isomerase; ketol 31.7 2.9E+02 0.01 26.1 10.5 80 158-242 208-298 (438)
450 1h1y_A D-ribulose-5-phosphate 31.5 1.5E+02 0.005 25.1 7.6 87 165-265 79-178 (228)
451 2nq5_A 5-methyltetrahydroptero 31.4 2.7E+02 0.0091 28.5 10.7 129 156-312 177-321 (755)
452 3b0p_A TRNA-dihydrouridine syn 31.2 3E+02 0.01 25.0 11.4 102 161-270 71-205 (350)
453 3t7v_A Methylornithine synthas 31.2 1.8E+02 0.0063 26.0 8.7 75 163-245 152-241 (350)
454 2nwr_A 2-dehydro-3-deoxyphosph 31.2 2.7E+02 0.0091 24.6 9.4 144 165-325 87-251 (267)
455 1w5q_A Delta-aminolevulinic ac 31.1 3.1E+02 0.011 25.1 18.2 223 53-306 65-321 (337)
456 2yyu_A Orotidine 5'-phosphate 30.9 1.8E+02 0.0061 25.0 8.2 127 166-306 75-212 (246)
457 1twi_A Diaminopimelate decarbo 30.9 3.2E+02 0.011 25.2 10.8 75 166-243 120-210 (434)
458 2oho_A Glutamate racemase; iso 30.9 1.5E+02 0.0051 25.9 7.8 28 153-180 54-81 (273)
459 1gxg_A Colicin E8 immunity pro 30.6 27 0.00091 25.6 2.2 42 247-301 31-76 (85)
460 3ufx_B Succinyl-COA synthetase 30.5 1.3E+02 0.0045 28.1 7.7 66 153-231 284-354 (397)
461 4fb5_A Probable oxidoreductase 30.3 57 0.002 29.6 5.1 46 161-209 106-153 (393)
462 1p1x_A Deoxyribose-phosphate a 30.2 31 0.0011 30.7 3.0 29 49-77 145-174 (260)
463 3q58_A N-acetylmannosamine-6-p 30.0 2.6E+02 0.0088 23.8 16.6 92 162-265 38-134 (229)
464 1ub3_A Aldolase protein; schif 29.8 43 0.0015 28.9 3.8 26 52-77 131-157 (220)
465 2dwu_A Glutamate racemase; iso 29.8 1.1E+02 0.0036 27.0 6.6 49 153-205 49-97 (276)
466 3uuw_A Putative oxidoreductase 29.6 67 0.0023 28.4 5.3 45 162-209 79-125 (308)
467 2wx3_A MRNA-decapping enzyme 1 29.5 27 0.00092 23.0 1.8 17 50-66 25-41 (51)
468 3p2y_A Alanine dehydrogenase/p 29.4 46 0.0016 31.3 4.2 22 163-184 118-139 (381)
469 3cqj_A L-ribulose-5-phosphate 29.3 1.7E+02 0.0057 25.3 7.8 68 155-229 142-214 (295)
470 2poz_A Putative dehydratase; o 29.2 3.3E+02 0.011 24.9 13.0 151 154-319 137-317 (392)
471 1sgj_A Citrate lyase, beta sub 29.1 62 0.0021 28.7 4.9 46 162-208 83-128 (284)
472 4ab4_A Xenobiotic reductase B; 29.1 3.4E+02 0.012 24.9 10.3 110 152-265 142-284 (362)
473 1e0t_A Pyruvate kinase, PK; ph 28.9 1.6E+02 0.0054 28.4 8.0 46 163-208 175-221 (470)
474 1ujp_A Tryptophan synthase alp 28.9 2E+02 0.007 25.2 8.3 128 182-322 26-165 (271)
475 3l5a_A NADH/flavin oxidoreduct 28.9 1.6E+02 0.0055 27.8 8.0 51 249-306 225-282 (419)
476 1xim_A D-xylose isomerase; iso 28.5 2.3E+02 0.0077 26.0 9.0 71 157-230 156-235 (393)
477 1vyr_A Pentaerythritol tetrani 28.5 3.4E+02 0.012 24.8 12.7 108 156-265 157-299 (364)
478 2ps2_A Putative mandelate race 28.4 2.8E+02 0.0097 25.1 9.6 38 233-270 160-200 (371)
479 1h5y_A HISF; histidine biosynt 28.3 2.6E+02 0.0088 23.2 13.7 81 163-255 36-123 (253)
480 2ffc_A Orotidine 5-monophospha 28.1 1.8E+02 0.0062 26.9 8.0 93 154-254 106-210 (353)
481 3vk5_A MOEO5; TIM barrel, tran 27.9 1.4E+02 0.0048 26.8 6.9 45 163-208 56-103 (286)
482 3oa2_A WBPB; oxidoreductase, s 27.9 74 0.0025 28.5 5.3 44 162-208 86-131 (318)
483 3ip3_A Oxidoreductase, putativ 27.9 81 0.0028 28.3 5.6 46 160-208 78-127 (337)
484 3ff4_A Uncharacterized protein 27.8 1.1E+02 0.0039 23.5 5.7 56 174-244 59-114 (122)
485 1tlt_A Putative oxidoreductase 27.8 1E+02 0.0035 27.3 6.2 46 161-209 77-124 (319)
486 2a4a_A Deoxyribose-phosphate a 27.8 32 0.0011 31.0 2.7 29 49-77 167-196 (281)
487 1h1y_A D-ribulose-5-phosphate 27.7 1.8E+02 0.0061 24.5 7.5 49 163-212 22-75 (228)
488 1qap_A Quinolinic acid phospho 27.7 1.2E+02 0.0041 27.3 6.6 23 170-193 225-247 (296)
489 1nns_A L-asparaginase II; amid 27.2 1.5E+02 0.0051 26.9 7.3 50 164-215 226-278 (326)
490 4adt_A Pyridoxine biosynthetic 26.9 24 0.00084 32.0 1.8 62 165-242 92-153 (297)
491 4gqa_A NAD binding oxidoreduct 26.9 94 0.0032 28.7 6.0 45 161-208 108-154 (412)
492 3vkj_A Isopentenyl-diphosphate 26.8 3.8E+02 0.013 24.7 12.7 142 159-321 75-232 (368)
493 3e82_A Putative oxidoreductase 26.8 79 0.0027 28.8 5.4 44 162-208 80-125 (364)
494 4e7p_A Response regulator; DNA 26.7 2E+02 0.0069 21.5 9.7 77 167-255 60-137 (150)
495 2e28_A Pyruvate kinase, PK; al 26.7 1.8E+02 0.0062 28.8 8.2 51 153-208 171-222 (587)
496 1pqr_A Alpha-A-conotoxin EIVA; 26.6 18 0.00062 20.6 0.5 8 308-315 1-8 (31)
497 3rc1_A Sugar 3-ketoreductase; 26.6 1E+02 0.0035 27.9 6.1 45 162-209 102-148 (350)
498 3oqb_A Oxidoreductase; structu 26.5 60 0.0021 29.7 4.5 44 162-208 96-141 (383)
499 4e8j_A Lincosamide resistance 26.4 1.1E+02 0.0036 25.2 5.4 67 1-73 1-73 (161)
500 1nq6_A XYS1; glycoside hydrola 26.4 74 0.0025 28.3 5.0 49 161-211 183-239 (302)
No 1
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=7.3e-73 Score=547.85 Aligned_cols=290 Identities=22% Similarity=0.341 Sum_probs=247.9
Q ss_pred cchHHHHHHHhhcCCeEEEecchHHHHHHCCCCCCCccchhhhcCCChHHHHHHHHHHHHhccceeecCCcCCChhhHHh
Q 020275 6 TTASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLS 85 (328)
Q Consensus 6 ~~~~~~~~~l~~~~~~lvlDGg~gt~L~~~G~~~~~~lws~~~ll~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~ 85 (328)
+|...|.++|++ ++++||||||||+|+++|++.. ++|++.+++++||.|++||++|++||||||+||||++|+.+|.+
T Consensus 8 ~~~~~l~~~L~~-~~ilIlDGgmGT~L~~~G~~~~-~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~ 85 (406)
T 1lt8_A 8 KAKKGILERLNA-GEIVIGDGGFVFALEKRGYVKA-GPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLEN 85 (406)
T ss_dssp ---CCHHHHHHT-TCCEECCCCHHHHHHHHTSSCT-TTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC---
T ss_pred cchHHHHHHHhc-CCEEEEeCccchHHHHCCCCCC-cccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHh
Confidence 456679999973 3599999999999999998753 58999999999999999999999999999999999999999999
Q ss_pred CCCCH---HHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHH
Q 020275 86 RGLSI---EEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFH 162 (328)
Q Consensus 86 ~g~~~---~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h 162 (328)
+|++. +++++||++||+|||+|+++ .+++|||||||+|.++. .+++++++++|
T Consensus 86 ~G~~~~~~~~~~eln~~Av~LAreAa~~-------------~~~~VAGsIGP~g~~l~-----------~~s~eel~~~~ 141 (406)
T 1lt8_A 86 RGNYVLEKISGQEVNEAAADIARQVADE-------------GDALVAGGVSQTPSYLS-----------AKSETEVKKVF 141 (406)
T ss_dssp ----------CHHHHHHHHHHHHHHHTT-------------TTCEEEEEECCCHHHHT-----------TCHHHHHHHHH
T ss_pred cCCccchhHHHHHHHHHHHHHHHHHHhc-------------CCCEEEEEcCCcccccC-----------CCCHHHHHHHH
Confidence 99742 45789999999999999864 25899999999998651 36899999999
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
++|+++|+++|||+|++|||+++.|++++++++++.+ +|||+||++.++++ ++|+++++++..+.+ .++++|||||
T Consensus 142 ~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~--lPv~iS~T~~~~G~-l~G~~~~~~~~~l~~-~~~~avGvNC 217 (406)
T 1lt8_A 142 LQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASG--KPVAATMAIGPEGD-LHGVPPGEAAVRLVK-AGASIIGVNC 217 (406)
T ss_dssp HHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGT--SCEEEEECCBTTBC-TTCCCHHHHHHHHHT-TTCSEEEEES
T ss_pred HHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhC--CcEEEEEEECCCCC-cCCCcHHHHHHHhhc-CCCCEEEecC
Confidence 9999999999999999999999999999999999864 99999999988888 899999999998876 4699999999
Q ss_pred C-ChhhhHHHHHHHHhhc-----CCeEEEEeCCCCccCCccccccCCC----CCChh-----HHHHHHHHHHHcCCeEEe
Q 020275 243 A-PPQFVENLICYFKELT-----KKAIVVYPNSGEVWDGRAKKWLPSK----CLGDG-----KFESFATRWRDSGAKLIG 307 (328)
Q Consensus 243 ~-~p~~~~~~l~~l~~~~-----~~pl~~ypN~g~~~d~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~G~~iiG 307 (328)
+ .|+.+.++++.+++.. +.|+++|||+|..|+...+.|.... ..+|+ +|++++++|.+.|++|||
T Consensus 218 ~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~Ga~iIG 297 (406)
T 1lt8_A 218 HFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIG 297 (406)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEEC
T ss_pred CCCHHHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 7 7999999999998764 6899999999988876556675311 13444 599999999999999999
Q ss_pred ecCCCChHHHHHHHHHHh
Q 020275 308 GCCRTTPSTIQAVSKVLK 325 (328)
Q Consensus 308 GCCGt~P~hI~al~~~l~ 325 (328)
|||||||+||++|+++++
T Consensus 298 GCCGTtPeHI~aia~~l~ 315 (406)
T 1lt8_A 298 GCCGFEPYHIRAIAEELA 315 (406)
T ss_dssp CCTTCCHHHHHHHHHHTH
T ss_pred EecCCCHHHHHHHHHHHh
Confidence 999999999999999886
No 2
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=3.5e-70 Score=550.83 Aligned_cols=284 Identities=25% Similarity=0.436 Sum_probs=256.8
Q ss_pred hHHHHHHHhhcCCeEEEecchHHHHHHCCCCCCCccchhhhcCCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCC
Q 020275 8 ASSLDDLIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLIKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRG 87 (328)
Q Consensus 8 ~~~~~~~l~~~~~~lvlDGg~gt~L~~~G~~~~~~lws~~~ll~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g 87 (328)
...|+++|++ +++||||||||+|+++|++...++|+ +++||.|+++|++|++||||||+||||++|+.+|.++|
T Consensus 4 ~~~l~~~l~~--~ililDGamGT~L~~~g~~~~~el~~----l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~g 77 (566)
T 1q7z_A 4 RREVSKLLSE--RVLLLDGAYGTEFMKYGYDDLPEELN----IKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKHG 77 (566)
T ss_dssp HHHHHHHHHH--CCEECCCCSHHHHHHTTCCSCGGGHH----HHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGGT
T ss_pred hhHHHHHHcC--CeEEEEChHHHHHHHCCCCCCchhhc----ccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhcC
Confidence 4568899974 79999999999999999988788996 89999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020275 88 LSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQ 167 (328)
Q Consensus 88 ~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~ 167 (328)
++ +++++||++|+++||+|+++ + +|||||||+|.++. .|+ .+++++++++|++|++
T Consensus 78 ~~-~~~~el~~~av~lAr~a~~~--------------~-~VAGsiGP~g~~~~-------~~~-~~~~~e~~~~~~~qi~ 133 (566)
T 1q7z_A 78 LE-DKLDPIVRNAVRIARRAAGE--------------K-LVFGDIGPTGELPY-------PLG-STLFEEFYENFRETVE 133 (566)
T ss_dssp CG-GGHHHHHHHHHHHHHHHHTT--------------S-EEEEEECCCSCCBT-------TTS-SBCHHHHHHHHHHHHH
T ss_pred ch-HHHHHHHHHHHHHHHHHHhC--------------C-eEEEeCCCcccCCC-------CCC-CCCHHHHHHHHHHHHH
Confidence 97 67999999999999999852 4 99999999998752 243 3799999999999999
Q ss_pred HHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC-Chh
Q 020275 168 VLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA-PPQ 246 (328)
Q Consensus 168 ~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~-~p~ 246 (328)
+|+++|||+|++||||++.|++++++++++...++|+|+||++.+++++++|+++++++..+.+ .++++||+||+ +|+
T Consensus 134 ~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~-~~~~avG~NC~~gp~ 212 (566)
T 1q7z_A 134 IMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDE-LDIDALGINCSLGPE 212 (566)
T ss_dssp HHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHT-SSCSEEEEESSSCHH
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhc-cCCCEEEEeCCCCHH
Confidence 9999999999999999999999999999985237999999999999999999999999999876 57999999996 799
Q ss_pred hhHHHHHHHHhhcCCeEEEEeCCCCcc--CCccccccCCCCCChhHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHH
Q 020275 247 FVENLICYFKELTKKAIVVYPNSGEVW--DGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCRTTPSTIQAVSKVL 324 (328)
Q Consensus 247 ~~~~~l~~l~~~~~~pl~~ypN~g~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCGt~P~hI~al~~~l 324 (328)
.+.++|+.+++.++.|+++|||+|..+ ++. ..|. .+|++|++++++|++.|++||||||||||+||++|++++
T Consensus 213 ~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~-~~~~----~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~aia~~~ 287 (566)
T 1q7z_A 213 EILPIFQELSQYTDKFLVVEPNAGKPIVENGK-TVYP----LKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVL 287 (566)
T ss_dssp HHHHHHHHHHHTCCSEEEEECCSSSCEEETTE-EECC----CCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCCCCcccCCc-cccC----CCHHHHHHHHHHHHHcCCcEEccccCCCHHHHHHHHHHh
Confidence 999999999999999999999999765 432 2352 368999999999999999999999999999999999998
Q ss_pred hcC
Q 020275 325 KER 327 (328)
Q Consensus 325 ~~~ 327 (328)
++.
T Consensus 288 ~~~ 290 (566)
T 1q7z_A 288 GNR 290 (566)
T ss_dssp CSC
T ss_pred cCC
Confidence 653
No 3
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.04 E-value=0.4 Score=42.25 Aligned_cols=87 Identities=11% Similarity=0.166 Sum_probs=56.8
Q ss_pred HHHHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETI--PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.+|++.+.+.|+|++++-+- .+..+++.+++.+++.+ ++++++.. +++++....+ .+++.||+
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v~-----------t~eea~~a~~--~Gad~Ig~ 155 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHH--LLTMADCS-----------SVDDGLACQR--LGADIIGT 155 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEECC-----------SHHHHHHHHH--TTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCC--CEEEEeCC-----------CHHHHHHHHh--CCCCEEEE
Confidence 45777888899999988764 23456677788888764 77776542 4566665543 47899987
Q ss_pred CCCC-------hhhhHHHHHHHHhhcCCeEEE
Q 020275 241 NCAP-------PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 241 NC~~-------p~~~~~~l~~l~~~~~~pl~~ 265 (328)
|-.. ...-..+++++.+. +.|+++
T Consensus 156 ~~~g~t~~~~~~~~~~~~i~~l~~~-~ipvIA 186 (232)
T 3igs_A 156 TMSGYTTPDTPEEPDLPLVKALHDA-GCRVIA 186 (232)
T ss_dssp TTTTSSSSSCCSSCCHHHHHHHHHT-TCCEEE
T ss_pred cCccCCCCCCCCCCCHHHHHHHHhc-CCcEEE
Confidence 5321 11123566777665 677664
No 4
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=95.48 E-value=0.32 Score=44.05 Aligned_cols=162 Identities=14% Similarity=0.084 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHhccceeecCCcCCChhh-----------HHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCC
Q 020275 54 HLVKRVHLEYLEAGADILVTSSYQATIPG-----------FLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHN 122 (328)
Q Consensus 54 e~V~~iH~~yl~AGAdiI~TnTy~as~~~-----------l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~ 122 (328)
+.-.++-+...++|||+|.-...-..|.. --..|++. .+..++.++.++++ .
T Consensus 34 ~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~-------~~~~~~v~~~r~~~----------~ 96 (271)
T 3nav_A 34 EQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTP-------DICFELIAQIRARN----------P 96 (271)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCH-------HHHHHHHHHHHHHC----------T
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHhcC----------C
Confidence 55677788888999999997765544322 11122221 13355666666542 1
Q ss_pred CCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCc
Q 020275 123 YNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQI 202 (328)
Q Consensus 123 ~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~ 202 (328)
..++.+-+-..|.- .|+ ...-++.+.++|||.+++=.+|. +|.....+++++.+ +
T Consensus 97 ~~Pivlm~Y~n~v~-----------~~g-----------~~~f~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~g--l 151 (271)
T 3nav_A 97 ETPIGLLMYANLVY-----------ARG-----------IDDFYQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFG--I 151 (271)
T ss_dssp TSCEEEEECHHHHH-----------HTC-----------HHHHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTT--C
T ss_pred CCCEEEEecCcHHH-----------HHh-----------HHHHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcC--C
Confidence 23444443332210 011 24456778889999999877775 67888888898886 4
Q ss_pred cEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEE----EECCC---ChhhhHHHHHHHHhhcCCeEEE
Q 020275 203 PSWICFSSVDGENAPSGESFKECLDIINKSGKVNAV----GINCA---PPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 203 pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i----GvNC~---~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
..+ .+.. .-++.+......+...+...+ |+-=. .+..+..+++++++.++.|+++
T Consensus 152 ~~I-~lva-------p~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 152 QPI-FIAP-------PTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALL 213 (271)
T ss_dssp EEE-EEEC-------TTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEE
T ss_pred eEE-EEEC-------CCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEE
Confidence 432 2221 222334333333333333332 11111 2456778899999888889877
No 5
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=95.13 E-value=0.3 Score=46.82 Aligned_cols=155 Identities=17% Similarity=0.161 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEecCCC---------H--------HH-HHHHHHHHHhcCCCccEEEEEEecCCCC
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLLAFETIPN---------K--------LE-AQALVELLEEENIQIPSWICFSSVDGEN 215 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~---------~--------~E-~~a~~~~~~~~~~~~pv~is~~~~~~~~ 215 (328)
..+.+++.|++- +++|+|+|.--|+.. + .| .+.+++++|+.....|++|.-++-.-+.
T Consensus 52 ~Pe~V~~iH~~Y----l~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~ 127 (406)
T 1lt8_A 52 HPEAVRQLHREF----LRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPS 127 (406)
T ss_dssp CHHHHHHHHHHH----HHTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHH
T ss_pred CHHHHHHHHHHH----HHhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCccc
Confidence 456667777654 458999885444421 1 12 2344566665421346788888755554
Q ss_pred CCCCCCHHHHHHHH-------HhcCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCC
Q 020275 216 APSGESFKECLDII-------NKSGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLG 287 (328)
Q Consensus 216 l~~G~~~~~~~~~~-------~~~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~ 287 (328)
.....+++++.+.. .+ .+++.|.+.-.. ...+..+++.++. ...|+++.---. .++ . +.+ .+
T Consensus 128 ~l~~~s~eel~~~~~eqi~~L~~-~GvDlll~ETi~~~~Eakaa~~a~~~-~~lPv~iS~T~~--~~G---~-l~G--~~ 197 (406)
T 1lt8_A 128 YLSAKSETEVKKVFLQQLEVFMK-KNVDFLIAEYFEHVEEAVWAVETLIA-SGKPVAATMAIG--PEG---D-LHG--VP 197 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHH-HTCSEEEECCCSCHHHHHHHHHHHGG-GTSCEEEEECCB--TTB---C-TTC--CC
T ss_pred ccCCCCHHHHHHHHHHHHHHHhh-CCCCEEEEcccCCHHHHHHHHHHHHH-hCCcEEEEEEEC--CCC---C-cCC--Cc
Confidence 44566777665432 22 489999999864 6777777777665 457877644321 011 1 111 23
Q ss_pred hhHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHHh
Q 020275 288 DGKFESFATRWRDSGAKLIGGCCRTTPSTIQAVSKVLK 325 (328)
Q Consensus 288 ~~~~~~~~~~~~~~G~~iiGGCCGt~P~hI~al~~~l~ 325 (328)
+.+.+....+.|+..||=-|.+.|+++..+-+.+.
T Consensus 198 ---~~~~~~~l~~~~~~avGvNC~~gP~~~~~~l~~l~ 232 (406)
T 1lt8_A 198 ---PGEAAVRLVKAGASIIGVNCHFDPTISLKTVKLMK 232 (406)
T ss_dssp ---HHHHHHHHHTTTCSEEEEESSSCHHHHHHHHHHHH
T ss_pred ---HHHHHHHhhcCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 44555555667999999999999999888776664
No 6
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.08 E-value=1.1 Score=39.35 Aligned_cols=87 Identities=10% Similarity=0.237 Sum_probs=56.8
Q ss_pred HHHHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETI--PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.++++.+.+.|+|++++-+- .+..+++.+++.+++.+ +++++.+ .+++++....+ .+++.||+
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v-----------~t~eea~~a~~--~Gad~Ig~ 155 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHG--LLAMADC-----------STVNEGISCHQ--KGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEEC-----------SSHHHHHHHHH--TTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCC--CEEEEec-----------CCHHHHHHHHh--CCCCEEEe
Confidence 45788888899999988754 24456677788888764 7777654 25677766544 47899987
Q ss_pred CCCC------h-hhhHHHHHHHHhhcCCeEEE
Q 020275 241 NCAP------P-QFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 241 NC~~------p-~~~~~~l~~l~~~~~~pl~~ 265 (328)
|-.. + ..-..+++++.+. +.|+++
T Consensus 156 ~~~g~t~~~~~~~~~~~li~~l~~~-~ipvIA 186 (229)
T 3q58_A 156 TLSGYTGPITPVEPDLAMVTQLSHA-GCRVIA 186 (229)
T ss_dssp TTTTSSSSCCCSSCCHHHHHHHHTT-TCCEEE
T ss_pred cCccCCCCCcCCCCCHHHHHHHHHc-CCCEEE
Confidence 5321 1 1123667777665 667654
No 7
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=95.04 E-value=0.67 Score=41.81 Aligned_cols=171 Identities=10% Similarity=0.060 Sum_probs=96.1
Q ss_pred hhhcCCCh--HHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHH----------HHHHHHHHHHHhhhh
Q 020275 46 ALYLIKQP--HLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLE----------KSVTLAVEARDKFWD 113 (328)
Q Consensus 46 ~~~ll~~P--e~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~----------~av~lA~~a~~~~~~ 113 (328)
.+.+.-+| +.-.++-+...++|||+|.-.-.-..|.. .| ..+...+. +..++.++.++.+
T Consensus 22 ~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~a---DG---p~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~-- 93 (267)
T 3vnd_A 22 PFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLA---DG---PVIQGANLRSLAAGTTSSDCFDIITKVRAQH-- 93 (267)
T ss_dssp EEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTT---CC---HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC---CC---HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--
Confidence 33344556 77788888899999999987644333321 11 11222222 2256666666532
Q ss_pred hhccCCCCCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHH
Q 020275 114 AVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVE 193 (328)
Q Consensus 114 ~~~~~~~~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~ 193 (328)
...++.+-+-..|. .......-++.+.++|||.+++=.+|. +|.....+
T Consensus 94 --------~~~Pivlm~Y~npv----------------------~~~g~e~f~~~~~~aGvdgvii~Dlp~-ee~~~~~~ 142 (267)
T 3vnd_A 94 --------PDMPIGLLLYANLV----------------------FANGIDEFYTKAQAAGVDSVLIADVPV-EESAPFSK 142 (267)
T ss_dssp --------TTCCEEEEECHHHH----------------------HHHCHHHHHHHHHHHTCCEEEETTSCG-GGCHHHHH
T ss_pred --------CCCCEEEEecCcHH----------------------HHhhHHHHHHHHHHcCCCEEEeCCCCH-hhHHHHHH
Confidence 12344443322221 011124457778889999999877765 67888888
Q ss_pred HHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceE-EEECCC-C-----hhhhHHHHHHHHhhcCCeEEE
Q 020275 194 LLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNA-VGINCA-P-----PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 194 ~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~-iGvNC~-~-----p~~~~~~l~~l~~~~~~pl~~ 265 (328)
.+++.+ +..+.-++ ..++.+......+...+... +.++++ . +..+...++++++.++.|+.+
T Consensus 143 ~~~~~g--l~~i~lia--------P~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 143 AAKAHG--IAPIFIAP--------PNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp HHHHTT--CEEECEEC--------TTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEE
T ss_pred HHHHcC--CeEEEEEC--------CCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 898886 44332232 33344444334433333333 345663 1 445778889999888888876
No 8
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.03 E-value=0.82 Score=41.64 Aligned_cols=144 Identities=13% Similarity=0.155 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (294)
T 2ehh_A 18 VDYEAL----GNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT---------GGNATHEA 84 (294)
T ss_dssp ECHHHH----HHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 565554 77888888899999875 32 23567777777776653 3368999776 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHH
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW 298 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 298 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+. + ...++++.+.+.+++
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----t-----g~~l~~~~~~~La~~- 153 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSR-----T-----CVEISVDTMFKLASE- 153 (294)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHH-----H-----SCCCCHHHHHHHHHH-
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcc-----c-----CcCCCHHHHHHHHhh-
Confidence 765532 357888877653 2355667777888888899999987431 1 112467666665532
Q ss_pred HHcCCeEEee--cCCCChHHHHHHHHHH
Q 020275 299 RDSGAKLIGG--CCRTTPSTIQAVSKVL 324 (328)
Q Consensus 299 ~~~G~~iiGG--CCGt~P~hI~al~~~l 324 (328)
-.+|+|= +|| +..++.++.+..
T Consensus 154 ---~pnivgiKds~g-d~~~~~~~~~~~ 177 (294)
T 2ehh_A 154 ---CENIVASKESTP-NMDRISEIVKRL 177 (294)
T ss_dssp ---CTTEEEEEECCS-CHHHHHHHHHHH
T ss_pred ---CCCEEEEEeCCC-CHHHHHHHHHhc
Confidence 2355652 222 456676666543
No 9
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.91 E-value=0.76 Score=42.93 Aligned_cols=144 Identities=13% Similarity=0.196 Sum_probs=90.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----e-cCCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----E-TIPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----E-T~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ | ..-+.+|-+.+++.+.+. +...||++.. .+.+..++
T Consensus 49 ID~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 115 (343)
T 2v9d_A 49 LDKPGT----AALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---------GGTNARET 115 (343)
T ss_dssp BCHHHH----HHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CSSCHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 566654 67788888899999875 3 223557777777776653 3368999777 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHH
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW 298 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 298 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+. + ...++++.+.+.+++
T Consensus 116 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~-----t-----g~~l~~e~~~~La~~- 184 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPAL-----T-----GQDLTPALVKTLADS- 184 (343)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHH-----H-----SSCCCHHHHHHHHHH-
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchh-----c-----CcCCCHHHHHHHHHh-
Confidence 765532 247888877653 2355677777888888899999987431 1 112456666665422
Q ss_pred HHcCCeEEee--cCCCChHHHHHHHHHH
Q 020275 299 RDSGAKLIGG--CCRTTPSTIQAVSKVL 324 (328)
Q Consensus 299 ~~~G~~iiGG--CCGt~P~hI~al~~~l 324 (328)
-.+|+|= +|| +..++.++.+.+
T Consensus 185 ---~pnIvgiKdssg-d~~~~~~l~~~~ 208 (343)
T 2v9d_A 185 ---RSNIIGIKDTID-SVAHLRSMIHTV 208 (343)
T ss_dssp ---CTTEEEEEECCS-CHHHHHHHHHHH
T ss_pred ---CCCEEEEEeCCC-CHHHHHHHHHhc
Confidence 1345552 232 356666665543
No 10
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=94.88 E-value=0.38 Score=44.17 Aligned_cols=104 Identities=15% Similarity=0.174 Sum_probs=72.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 34 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~st~~a 100 (304)
T 3cpr_A 34 IDIAAG----REVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---------GTNNTRTS 100 (304)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---------CCCCHHHH
Confidence 566554 67788888899999875 42 23557777777776653 3368999776 35577888
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 101 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P 151 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIP 151 (304)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 775532 357888877553 23556677778888888999999874
No 11
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=94.84 E-value=0.99 Score=41.37 Aligned_cols=144 Identities=21% Similarity=0.202 Sum_probs=90.4
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 30 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~~st~~a 96 (306)
T 1o5k_A 30 LDLESY----ERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---------GTNSTEKT 96 (306)
T ss_dssp ECHHHH----HHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---------CCccHHHH
Confidence 565554 67788888899999875 32 24567777788776653 3368999777 34567778
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHH
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW 298 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 298 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+. + ...++++.+.+.+++
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----t-----g~~l~~~~~~~La~~- 165 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGR-----T-----GVNVLPETAARIAAD- 165 (306)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHH-----H-----SCCCCHHHHHHHHHH-
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccc-----c-----CcCCCHHHHHHHHHh-
Confidence 765532 247888877553 2355667777888878899999987431 1 112456666665422
Q ss_pred HHcCCeEEee--cCCCChHHHHHHHHHH
Q 020275 299 RDSGAKLIGG--CCRTTPSTIQAVSKVL 324 (328)
Q Consensus 299 ~~~G~~iiGG--CCGt~P~hI~al~~~l 324 (328)
-.+|+|= +|| +..++.++.+..
T Consensus 166 ---~pnIvgiKdssg-d~~~~~~~~~~~ 189 (306)
T 1o5k_A 166 ---LKNVVGIXEANP-DIDQIDRTVSLT 189 (306)
T ss_dssp ---CTTEEEEEECCC-CHHHHHHHHHHH
T ss_pred ---CCCEEEEeCCCC-CHHHHHHHHHhc
Confidence 2355552 332 356666665543
No 12
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=94.79 E-value=2.1 Score=39.25 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecC-----CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETI-----PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ -|- -+.+|=+.+++.+.+. +.++||++.. .+.+..++
T Consensus 26 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 92 (309)
T 3fkr_A 26 LDLASQ----KRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---------SHYSTQVC 92 (309)
T ss_dssp BCHHHH----HHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCchHHHH
Confidence 565554 77788888899998766 222 2567777788776663 3368999887 34567777
Q ss_pred HHHHHh--cCCceEEEECCC--------ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHH
Q 020275 226 LDIINK--SGKVNAVGINCA--------PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFA 295 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~--------~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~ 295 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+ + ...++++.+.+.+
T Consensus 93 i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~------t-----g~~l~~~~~~~La 161 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA------S-----GTALSAPFLARMA 161 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG------G-----CCCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC------C-----CCCCCHHHHHHHH
Confidence 765532 257888887542 235566677788888899999997631 1 1124565555544
Q ss_pred HHHHHcCCeEEeec--CCCChHHHHHHHHHH
Q 020275 296 TRWRDSGAKLIGGC--CRTTPSTIQAVSKVL 324 (328)
Q Consensus 296 ~~~~~~G~~iiGGC--CGt~P~hI~al~~~l 324 (328)
+ .-.+|+|== |+...++++++.+..
T Consensus 162 ~----~~pnIvgiK~~~~~~~~~~~~~~~~~ 188 (309)
T 3fkr_A 162 R----EIEQVAYFXIETPGAANKLRELIRLG 188 (309)
T ss_dssp H----HSTTEEEEEECSSSHHHHHHHHHHHH
T ss_pred h----hCCCEEEEECCCcchHHHHHHHHHhc
Confidence 3 234666621 223456676666543
No 13
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=94.66 E-value=0.36 Score=44.58 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecC-----CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETI-----PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ -|. -+.+|=+.+++.+.+. +.++||++.. .+.+..++
T Consensus 40 iD~~~l----~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~~a 106 (315)
T 3si9_A 40 IDEKAF----CNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA---------GSNSTSEA 106 (315)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 566654 67788888899999873 221 1467777777776653 3368999876 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 107 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P 157 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIP 157 (315)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCc
Confidence 775532 257888777552 24567777788888889999999764
No 14
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=94.54 E-value=0.36 Score=44.03 Aligned_cols=104 Identities=18% Similarity=0.175 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (292)
T 2vc6_A 18 IDEVAL----HDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA---------GSNSTAEA 84 (292)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 565554 67788888899999875 32 23567777787776653 3368999777 34566777
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+..- +.+.+....+.+.+.++.|+++|=+-
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P 135 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIP 135 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 765532 358888888774 23556677778888888999999764
No 15
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=94.51 E-value=0.46 Score=43.29 Aligned_cols=104 Identities=14% Similarity=0.163 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecCC-----CHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETIP-----NKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ -|.. +.+|-+.+++.+.+. +...||++.. .+.+..++
T Consensus 19 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 85 (291)
T 3tak_A 19 VDWKSL----EKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---------GANSTREA 85 (291)
T ss_dssp BCHHHH----HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHHH
Confidence 566554 67788888899997653 4444 578888888877663 3368999876 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVP 136 (291)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 775532 247788777552 23566777788888889999999763
No 16
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.40 E-value=0.37 Score=44.08 Aligned_cols=116 Identities=11% Similarity=0.086 Sum_probs=72.8
Q ss_pred HHHHHhcCCCeEEEecCCCHH-------------------------HHHHHHHHHHhc-C-CCccEEEEEEecCCCCCCC
Q 020275 166 LQVLVESGPDLLAFETIPNKL-------------------------EAQALVELLEEE-N-IQIPSWICFSSVDGENAPS 218 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~-------------------------E~~a~~~~~~~~-~-~~~pv~is~~~~~~~~l~~ 218 (328)
++.+.+.|+.++..+|++... .....++.+++. . .+.|+++++.
T Consensus 31 ~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~--------- 101 (314)
T 2e6f_A 31 LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSIS--------- 101 (314)
T ss_dssp HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEEC---------
T ss_pred HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeC---------
Confidence 344677899998887754221 122233333332 1 2689999984
Q ss_pred CCCHHH---HHHHHHhcCCce---EEEECCCC------------hhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccc
Q 020275 219 GESFKE---CLDIINKSGKVN---AVGINCAP------------PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKW 280 (328)
Q Consensus 219 G~~~~~---~~~~~~~~~~~~---~iGvNC~~------------p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~ 280 (328)
|.+.++ +++.+.+ .+++ +|=+|+.+ |+.+..+++.+++..+.|+++.-..+
T Consensus 102 g~~~~~~~~~a~~~~~-~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~---------- 170 (314)
T 2e6f_A 102 GLSVEENVAMVRRLAP-VAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY---------- 170 (314)
T ss_dssp CSSHHHHHHHHHHHHH-HHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC----------
T ss_pred CCCHHHHHHHHHHHHH-hCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC----------
Confidence 445554 4444443 2567 78888863 44566788888887788998864321
Q ss_pred cCCCCCChhHHHHHHHHHHHcC-CeEE
Q 020275 281 LPSKCLGDGKFESFATRWRDSG-AKLI 306 (328)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~G-~~ii 306 (328)
.+.+++.++++...+.| +..|
T Consensus 171 -----~~~~~~~~~a~~~~~aG~~d~i 192 (314)
T 2e6f_A 171 -----FDIAHFDTAAAVLNEFPLVKFV 192 (314)
T ss_dssp -----CCHHHHHHHHHHHHTCTTEEEE
T ss_pred -----CCHHHHHHHHHHHHhcCCceEE
Confidence 24667888888888999 7654
No 17
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=94.37 E-value=0.52 Score=43.18 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 30 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~a 96 (301)
T 1xky_A 30 IDFAKT----TKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---------GSNNTHAS 96 (301)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---------CCCCHHHH
Confidence 566554 67788888899999875 32 23557777777776653 3368999777 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 147 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVP 147 (301)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 357888887653 23556777778888888999999774
No 18
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.34 E-value=2.1 Score=39.34 Aligned_cols=145 Identities=11% Similarity=0.022 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecC-----CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETI-----PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL 226 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 226 (328)
++.+.+ +..++.+++.|||.|++ -|. -+.+|=+.+++.+.+...++||++.. .+.+..+++
T Consensus 26 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv---------g~~~t~~ai 92 (313)
T 3dz1_A 26 IDDVSI----DRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV---------SAPGFAAMR 92 (313)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC---------CCSSHHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEec---------CCCCHHHHH
Confidence 566554 77888888899998765 222 25677778887766643368999876 345677887
Q ss_pred HHHHh--cCCceEEEECCC----ChhhhHHHHHHHHhhcC--CeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHH
Q 020275 227 DIINK--SGKVNAVGINCA----PPQFVENLICYFKELTK--KAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW 298 (328)
Q Consensus 227 ~~~~~--~~~~~~iGvNC~----~p~~~~~~l~~l~~~~~--~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 298 (328)
+..+. ..+++++.+-.- +.+.+....+.+.+.++ .|+++|=+-+. + ...++++.+.+.+
T Consensus 93 ~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~-----t-----g~~l~~~~~~~La--- 159 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLT-----L-----SVVMTPKVIRQIV--- 159 (313)
T ss_dssp HHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHH-----H-----CCCCCHHHHHHHH---
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccc-----c-----CcCCCHHHHHHHH---
Confidence 75532 247888887442 23556677778877777 99999976321 1 1124565555543
Q ss_pred HHcCCeEEeec--CCCChHHHHHHHHHH
Q 020275 299 RDSGAKLIGGC--CRTTPSTIQAVSKVL 324 (328)
Q Consensus 299 ~~~G~~iiGGC--CGt~P~hI~al~~~l 324 (328)
+.-.+|+|== |..+..++.++++..
T Consensus 160 -~~~pnIvgiKd~~~~~~~~~~~~~~~~ 186 (313)
T 3dz1_A 160 -MDSASCVMLKHEDWPGLEKITTLRGFQ 186 (313)
T ss_dssp -HHCSSEEEEEECCSSCHHHHHHHHHHH
T ss_pred -HhCCCEEEEEcCCCCCHHHHHHHHHhc
Confidence 2234556521 223567777776655
No 19
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.30 E-value=2 Score=38.20 Aligned_cols=119 Identities=12% Similarity=0.064 Sum_probs=73.9
Q ss_pred HHHHHHhcCCCeE---EEecCCCHH----HHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCH---HHHHHHHHhcCC
Q 020275 165 RLQVLVESGPDLL---AFETIPNKL----EAQALVELLEEENIQIPSWICFSSVDGENAPSGESF---KECLDIINKSGK 234 (328)
Q Consensus 165 qi~~l~~~gvD~i---~~ET~~~~~----E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~---~~~~~~~~~~~~ 234 (328)
+++...+.|+|.| +..--++.. +++.+++++++.+ .|+++-... ++.++.+|.+. .+++..+.+ .+
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~~-~G~~l~~~~~~~~~~~~a~~a~~-~G 179 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMYP-RGKHIQNERDPELVAHAARLGAE-LG 179 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEEE-CSTTCSCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeCC-CCcccCCCCCHhHHHHHHHHHHH-cC
Confidence 5666777899998 555555443 4566777777664 888876433 33455555554 344344444 57
Q ss_pred ceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCe
Q 020275 235 VNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAK 304 (328)
Q Consensus 235 ~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 304 (328)
++.|+++=. .-...++++....+.|+++ .+|.. . .+++++.+.+.++.+.|+.
T Consensus 180 ad~i~~~~~---~~~~~l~~i~~~~~ipvva--~GGi~----------~--~~~~~~~~~~~~~~~~Ga~ 232 (273)
T 2qjg_A 180 ADIVKTSYT---GDIDSFRDVVKGCPAPVVV--AGGPK----------T--NTDEEFLQMIKDAMEAGAA 232 (273)
T ss_dssp CSEEEECCC---SSHHHHHHHHHHCSSCEEE--ECCSC----------C--SSHHHHHHHHHHHHHHTCS
T ss_pred CCEEEECCC---CCHHHHHHHHHhCCCCEEE--EeCCC----------C--CCHHHHHHHHHHHHHcCCc
Confidence 889998831 1234556666556778766 33420 0 1366788888888889985
No 20
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=94.29 E-value=1.9 Score=43.00 Aligned_cols=157 Identities=15% Similarity=0.179 Sum_probs=96.7
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHH-------------HH-HHHHHHHHhcCCCccEEEEEEecCCCCCC--
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLLAFETIPNKL-------------EA-QALVELLEEENIQIPSWICFSSVDGENAP-- 217 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~-------------E~-~a~~~~~~~~~~~~pv~is~~~~~~~~l~-- 217 (328)
..+.+++.|+.- +++|+|+|.--|+..-. |+ +.+++.+|+.. +.+ +|.-++-.-+...
T Consensus 42 ~Pe~V~~iH~~Y----l~AGAdii~TnTf~a~~~~l~~~g~~~~~~el~~~av~lAr~a~-~~~-~VAGsiGP~g~~~~~ 115 (566)
T 1q7z_A 42 APDVVLKVHRSY----IESGSDVILTNTFGATRMKLRKHGLEDKLDPIVRNAVRIARRAA-GEK-LVFGDIGPTGELPYP 115 (566)
T ss_dssp CHHHHHHHHHHH----HHHTCSEEECSCTTCSHHHHGGGTCGGGHHHHHHHHHHHHHHHH-TTS-EEEEEECCCSCCBTT
T ss_pred CHHHHHHHHHHH----HHhhcceeecCcccCCHHHHHhcCchHHHHHHHHHHHHHHHHHH-hCC-eEEEeCCCcccCCCC
Confidence 457777788754 45899988665654322 21 34456666542 124 7777765555432
Q ss_pred -CCCCHHHHHHHHHh------cCCceEEEECCC-ChhhhHHHHHHHHhh-cCCeEEEEeCCCCccCCccccccCCCCCCh
Q 020275 218 -SGESFKECLDIINK------SGKVNAVGINCA-PPQFVENLICYFKEL-TKKAIVVYPNSGEVWDGRAKKWLPSKCLGD 288 (328)
Q Consensus 218 -~G~~~~~~~~~~~~------~~~~~~iGvNC~-~p~~~~~~l~~l~~~-~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~ 288 (328)
.+.+++++.+.... ..+++.+.+.-. +...+..++..+++. .+.|+++--.... ++. ... +.+
T Consensus 116 ~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~--~g~---~~~--G~~- 187 (566)
T 1q7z_A 116 LGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDE--KGR---SLT--GTD- 187 (566)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCT--TSC---CTT--SCC-
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC--CCe---eCC--CCc-
Confidence 22567766543211 258999999875 577788888888764 4678766433210 010 011 123
Q ss_pred hHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHHhc
Q 020275 289 GKFESFATRWRDSGAKLIGGCCRTTPSTIQAVSKVLKE 326 (328)
Q Consensus 289 ~~~~~~~~~~~~~G~~iiGGCCGt~P~hI~al~~~l~~ 326 (328)
+.+.+......|+..||=-|+++|+|+..+-+.+..
T Consensus 188 --~~~~~~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~ 223 (566)
T 1q7z_A 188 --PANFAITFDELDIDALGINCSLGPEEILPIFQELSQ 223 (566)
T ss_dssp --HHHHHHHHHTSSCSEEEEESSSCHHHHHHHHHHHHH
T ss_pred --HHHHHHHhhccCCCEEEEeCCCCHHHHHHHHHHHHh
Confidence 444444455679999999999999999998777653
No 21
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=94.28 E-value=0.75 Score=41.99 Aligned_cols=104 Identities=14% Similarity=0.159 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecCC-----CHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETIP-----NKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ -|.. +.+|=+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 25 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 91 (297)
T 3flu_A 25 IHYEQL----RDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT---------GANNTVEA 91 (297)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHH
Confidence 566554 67788888999998765 3332 567877888776653 3368999876 34567888
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 92 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P 142 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVP 142 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 775532 257888777552 23556677788888889999999763
No 22
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.13 E-value=0.6 Score=42.54 Aligned_cols=104 Identities=14% Similarity=0.120 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+.+.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 19 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 85 (292)
T 2ojp_A 19 VCRASL----KKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATAEA 85 (292)
T ss_dssp BCHHHH----HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 566554 66788888899999876 32 23567777787776653 3368999777 34577888
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P 136 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVP 136 (292)
T ss_dssp HHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 876643 257888877653 23556677778888788999999763
No 23
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=94.01 E-value=0.71 Score=42.26 Aligned_cols=104 Identities=13% Similarity=0.101 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecCC-----CHHHHHHHHHHHHhc-CC-CccEEEEEEecCCCCCCCCCCHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETIP-----NKLEAQALVELLEEE-NI-QIPSWICFSSVDGENAPSGESFKE 224 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~~~~~~-~~-~~pv~is~~~~~~~~l~~G~~~~~ 224 (328)
++.+.+ +..++.+++.|||.|++ -|.. +.+|=+.+++.+.+. +. +.||++.. .+.+..+
T Consensus 25 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ 91 (301)
T 3m5v_A 25 VDEQSY----ARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHE 91 (301)
T ss_dssp ECHHHH----HHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHH
Confidence 565554 67788888899999876 2222 567877888776664 43 58999876 3456788
Q ss_pred HHHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 225 CLDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 225 ~~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
+++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 92 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 143 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVP 143 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 8776533 257888887653 23567777788888889999999763
No 24
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=93.94 E-value=0.72 Score=42.91 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++++.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +..+||++.. .+.+..++
T Consensus 52 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 118 (332)
T 2r8w_A 52 VDIEAF----SALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGI---------GALRTDEA 118 (332)
T ss_dssp BCHHHH----HHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 566654 67788888899999875 32 23567777787776653 3368999887 34567778
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 119 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P 169 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNP 169 (332)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 247888888663 23556677778888888999999764
No 25
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=93.88 E-value=0.59 Score=42.51 Aligned_cols=104 Identities=16% Similarity=0.157 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ecC-CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ETI-PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET~-~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |.. -+.+|=+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (289)
T 2yxg_A 18 VDFDGL----EENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA---------GSNCTEEA 84 (289)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 565554 67788888899999865 322 3557777777776653 3368999777 34567777
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 85 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P 135 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVP 135 (289)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 247888877653 23556777778888888999999774
No 26
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.86 E-value=0.43 Score=43.51 Aligned_cols=104 Identities=13% Similarity=0.174 Sum_probs=69.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+. ++..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 19 iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---------g~~~t~~a 85 (291)
T 3a5f_A 19 VDFDK----LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---------GSNNTAAS 85 (291)
T ss_dssp BCHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 45554 467788888899999876 32 23567777777776653 3368999777 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVP 136 (291)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 357888887653 23445555566666678899999774
No 27
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=93.78 E-value=1.7 Score=40.12 Aligned_cols=105 Identities=20% Similarity=0.225 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecC-----CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETI-----PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ -|. -+.+|=+.+++.+.+. +..+||++.. .+.+..++
T Consensus 29 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 95 (318)
T 3qfe_A 29 LDLASQ----ERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQV 95 (318)
T ss_dssp ECHHHH----HHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 565554 77888888999998764 222 2567777788776653 3368999876 34577888
Q ss_pred HHHHHh--cCCceEEEECCCC-------hhhhHHHHHHHHhhcCCeEEEEeCCC
Q 020275 226 LDIINK--SGKVNAVGINCAP-------PQFVENLICYFKELTKKAIVVYPNSG 270 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~~-------p~~~~~~l~~l~~~~~~pl~~ypN~g 270 (328)
++..++ ..+++++.+-.-. .+.+....+.+.+.++.|+++|=+-+
T Consensus 96 i~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~ 149 (318)
T 3qfe_A 96 LEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPG 149 (318)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 776533 2478888875531 23455666777777889999998744
No 28
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=93.65 E-value=0.8 Score=42.20 Aligned_cols=105 Identities=13% Similarity=0.123 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+ +..++
T Consensus 30 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~-st~~a 95 (314)
T 3d0c_A 30 IDWKGL----DDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI---------GY-SVDTA 95 (314)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CS-SHHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC---------Cc-CHHHH
Confidence 566554 67788888899999865 21 23567777777776653 3368999887 34 67778
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCCCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNSGE 271 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~g~ 271 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=..|.
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~ 148 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH 148 (314)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTT
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 765532 358888888763 2355667777888888899999974453
No 29
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=93.64 E-value=1.6 Score=40.55 Aligned_cols=134 Identities=19% Similarity=0.211 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCC-C-----------------HHHHHHHHHHHHhcCCCccEEEEEEecCCCC--
Q 020275 156 EKLKDFHRRRLQVLVESGPDLLAFETIP-N-----------------KLEAQALVELLEEENIQIPSWICFSSVDGEN-- 215 (328)
Q Consensus 156 ~e~~~~h~~qi~~l~~~gvD~i~~ET~~-~-----------------~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~-- 215 (328)
+.+..+|++++ +.|+.+++.|... + +...+.+++++++.+ .++++.+.=. |+
T Consensus 39 ~~~~~~y~~rA----~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g--~~i~~QL~h~--Gr~~ 110 (338)
T 1z41_A 39 PFHMAHYISRA----IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQG--SKIGIQLAHA--GRKA 110 (338)
T ss_dssp HHHHHHHHHHH----HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTT--CEEEEEEECC--GGGC
T ss_pred HHHHHHHHHHH----cCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcC--CEEEEEecCC--Cccc
Confidence 67778888775 3789999999541 1 122456667777765 6888888621 11
Q ss_pred -------------------CCCCC----------CHHHHHHHHHhcCCceEEEECCCC---------hh-----------
Q 020275 216 -------------------APSGE----------SFKECLDIINKSGKVNAVGINCAP---------PQ----------- 246 (328)
Q Consensus 216 -------------------l~~G~----------~~~~~~~~~~~~~~~~~iGvNC~~---------p~----------- 246 (328)
.+.-. .+.+++..+.+ .+.++|=|||.+ |.
T Consensus 111 ~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~-aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGs 189 (338)
T 1z41_A 111 ELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKE-AGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGS 189 (338)
T ss_dssp CCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS
T ss_pred CCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEeccccchHHHHccCCCcCCcCcccCcc
Confidence 00001 13344444443 589999999874 21
Q ss_pred ------hhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEe
Q 020275 247 ------FVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIG 307 (328)
Q Consensus 247 ------~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiG 307 (328)
.+..+++.+++..+.|+++.-+... |.. ...+.+++.++++.+.+.|+.+|-
T Consensus 190 lenr~r~~~eiv~avr~~v~~pv~vris~~~--------~~~-~g~~~~~~~~~a~~l~~~Gvd~i~ 247 (338)
T 1z41_A 190 PENRYRFLREIIDEVKQVWDGPLFVRVSASD--------YTD-KGLDIADHIGFAKWMKEQGVDLID 247 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSCEEEEEECCC--------CST-TSCCHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhhHHHHHHHHHHHHHHcCCcEEEEecCcc--------cCC-CCCCHHHHHHHHHHHHHcCCCEEE
Confidence 2456667777777889988766532 211 123567788888888888875543
No 30
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=93.64 E-value=0.84 Score=42.08 Aligned_cols=104 Identities=13% Similarity=0.170 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecC-----CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETI-----PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ -|. -+.+|-+.+++.+.+. +...||++.. .+.+..++
T Consensus 41 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~ea 107 (314)
T 3qze_A 41 LDWDSL----AKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---------GANSTREA 107 (314)
T ss_dssp BCHHHH----HHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHH
Confidence 566554 67788888899998766 221 2567777787776653 3368999876 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 158 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVP 158 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 776532 257888777653 23567777788888889999999763
No 31
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.56 E-value=0.84 Score=42.10 Aligned_cols=104 Identities=17% Similarity=0.153 Sum_probs=73.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecC-----CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETI-----PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ -|. -+.+|-+.+++.+.+. +.++||++.. .+.+..++
T Consensus 42 iD~~~l----~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~~t~~a 108 (315)
T 3na8_A 42 LDLPAL----GRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV---------SDLTTAKT 108 (315)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 566554 77788888899998764 221 2467878888877663 3368999876 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 109 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 159 (315)
T 3na8_A 109 VRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNP 159 (315)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCc
Confidence 776532 257888888663 23567777788888889999999864
No 32
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=93.53 E-value=0.69 Score=42.26 Aligned_cols=104 Identities=16% Similarity=0.147 Sum_probs=72.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (297)
T 2rfg_A 18 VDEKAL----AGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---------GSNNPVEA 84 (297)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---------CCCCHHHH
Confidence 565554 67788888899999875 32 23567777777776653 3368999777 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 135 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIP 135 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 247888888763 23556677778888888999999764
No 33
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=93.53 E-value=1.5 Score=39.20 Aligned_cols=149 Identities=14% Similarity=0.190 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeE-----EEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCC--HHHHH
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLL-----AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGES--FKECL 226 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i-----~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~--~~~~~ 226 (328)
+.+++ ..+++.+...|+|++ +++.+++..++...+..+++.-.++|+++++-...+|--..+.. -.+..
T Consensus 30 t~~e~----l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll 105 (258)
T 4h3d_A 30 NKKDI----IKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLN 105 (258)
T ss_dssp SHHHH----HHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHH
T ss_pred CHHHH----HHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHH
Confidence 55665 445666677889987 67888899999988888887544799999997655542223321 11222
Q ss_pred HHHHhcCCceEEEECCCCh-hhhHHHHHHHHhhcCCeEEE-EeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCe
Q 020275 227 DIINKSGKVNAVGINCAPP-QFVENLICYFKELTKKAIVV-YPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAK 304 (328)
Q Consensus 227 ~~~~~~~~~~~iGvNC~~p-~~~~~~l~~l~~~~~~pl~~-ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 304 (328)
..+.....++.|=+.=..+ +.+..+++..++. ...+++ |= +|. ..-+.+++.+...+..+.|+.
T Consensus 106 ~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~-~~kiI~S~H-----------df~--~TP~~~el~~~~~~~~~~gaD 171 (258)
T 4h3d_A 106 KEISNTGLVDLIDVELFMGDEVIDEVVNFAHKK-EVKVIISNH-----------DFN--KTPKKEEIVSRLCRMQELGAD 171 (258)
T ss_dssp HHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHT-TCEEEEEEE-----------ESS--CCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHhcCCchhhHHhhhccHHHHHHHHHHHHhC-CCEEEEEEe-----------cCC--CCCCHHHHHHHHHHHHHhCCC
Confidence 2222223466777766544 3444444444332 333333 21 121 111346788888888888975
Q ss_pred EEeecC-CCChHHHHHH
Q 020275 305 LIGGCC-RTTPSTIQAV 320 (328)
Q Consensus 305 iiGGCC-Gt~P~hI~al 320 (328)
|+==++ -.++++.-.|
T Consensus 172 IvKia~~~~~~~D~l~L 188 (258)
T 4h3d_A 172 LPKIAVMPQNEKDVLVL 188 (258)
T ss_dssp EEEEEECCSSHHHHHHH
T ss_pred EEEEEEccCCHHHHHHH
Confidence 533222 1245554443
No 34
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=93.45 E-value=2.3 Score=40.92 Aligned_cols=135 Identities=13% Similarity=0.153 Sum_probs=90.3
Q ss_pred HHHHHHHHhcCCCeEEEecCC---------------CHHHHHHHHHHH----HhcCCCccEEEEEEecCCC---------
Q 020275 163 RRRLQVLVESGPDLLAFETIP---------------NKLEAQALVELL----EEENIQIPSWICFSSVDGE--------- 214 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~---------------~~~E~~a~~~~~----~~~~~~~pv~is~~~~~~~--------- 214 (328)
.+.++.+.++|+-.|-+|-.. +..|...=++++ ++.+ .|++|---.+...
T Consensus 170 ~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g--~d~~IiARTDa~~a~l~~s~~d 247 (439)
T 3i4e_A 170 FELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMG--TPTVLVARTDAEAADLITSDID 247 (439)
T ss_dssp HHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCeEEEEEcCcccccccccccc
Confidence 457888999999999999654 345544434443 3343 6777776665422
Q ss_pred ----------CCCCC-----CCHHHHHHHHHh-cCCceEEEECCC--ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCc
Q 020275 215 ----------NAPSG-----ESFKECLDIINK-SGKVNAVGINCA--PPQFVENLICYFKELTKKAIVVYPNSGEVWDGR 276 (328)
Q Consensus 215 ----------~l~~G-----~~~~~~~~~~~~-~~~~~~iGvNC~--~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~ 276 (328)
++..| ..++++++.... ..+.++|=+-.. .++.+..+.+.+....+..+++|+++..
T Consensus 248 ~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPs----- 322 (439)
T 3i4e_A 248 DNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAPYADLIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPS----- 322 (439)
T ss_dssp TTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTTTCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSS-----
T ss_pred cccchhhcccCcccccccccCCHHHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHhcccCCceEEeeCCCCC-----
Confidence 12222 458888876543 137788877542 5788888888887666677888877542
Q ss_pred cccccCCCCCChhHHHHHHHHHHHcCCeEEe
Q 020275 277 AKKWLPSKCLGDGKFESFATRWRDSGAKLIG 307 (328)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiG 307 (328)
-.|... ++++++..|..++.+.|++++=
T Consensus 323 -fnw~~~--~~~~~~~~f~~eL~~lGv~~v~ 350 (439)
T 3i4e_A 323 -FNWKKN--LDDATIAKFQKELGAMGYKFQF 350 (439)
T ss_dssp -SCHHHH--SCHHHHHTHHHHHHHHTCCEEE
T ss_pred -CcCccc--CCHHHHHHHHHHHHHcCCeEEE
Confidence 135322 5788899999999999987654
No 35
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=93.40 E-value=0.68 Score=42.68 Aligned_cols=102 Identities=16% Similarity=0.086 Sum_probs=71.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEe-cC-----CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFE-TI-----PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T~-----~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++- |. -+.+|=+.+++.+.+. +..+||++... .+..++
T Consensus 30 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg----------~~t~~a 95 (316)
T 3e96_A 30 IDWHHY----KETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG----------YATSTA 95 (316)
T ss_dssp BCHHHH----HHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC----------SSHHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC----------cCHHHH
Confidence 565554 778888889999998652 21 2567777788776653 33689998862 256777
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 96 IELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 765532 247888887642 3456777778888888899999976
No 36
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=93.35 E-value=1.9 Score=39.58 Aligned_cols=118 Identities=9% Similarity=0.059 Sum_probs=73.2
Q ss_pred HHHHHhcCCCeEEEecC--CCH------HHHHHHHHHHHhcCCCccEEEEEEecCCCCCCC-CCC---HHHHHHHHHhcC
Q 020275 166 LQVLVESGPDLLAFETI--PNK------LEAQALVELLEEENIQIPSWICFSSVDGENAPS-GES---FKECLDIINKSG 233 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~--~~~------~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~-G~~---~~~~~~~~~~~~ 233 (328)
++...+.|+|.+-+=.. ++. .+++.+.+.+++. ++|+++-+...... +.+ ..+ +.++++.+.+ .
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~--G~p~lv~~~~~g~~-v~~~~~~~~~v~~aa~~a~~-l 189 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSN--GLLSIIEPVVRPPR-CGDKFDREQAIIDAAKELGD-S 189 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTT--TCEEEEEEEECCCS-SCSCCCHHHHHHHHHHHHTT-S
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHc--CCcEEEEEECCCCc-cccCCChhHHHHHHHHHHHH-c
Confidence 34455679999852222 322 5566666777766 49988887654432 222 322 4555555544 5
Q ss_pred CceEEEECCC-----ChhhhHHHHHHHHhhcCCe-EEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCe
Q 020275 234 KVNAVGINCA-----PPQFVENLICYFKELTKKA-IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAK 304 (328)
Q Consensus 234 ~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~p-l~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 304 (328)
+++.+++.-. .++.+..+++.....++.| +++ +| +.++++|.+.++..++.|++
T Consensus 190 GaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~---aG--------------G~~~~~~~~~~~~a~~aGa~ 249 (304)
T 1to3_A 190 GADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVIL---SS--------------GVDEKLFPRAVRVAMEAGAS 249 (304)
T ss_dssp SCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEEC---CT--------------TSCTTTHHHHHHHHHHTTCC
T ss_pred CCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEE---ec--------------CCCHHHHHHHHHHHHHcCCe
Confidence 8899998884 4567777777766656777 433 11 12466788888888888984
No 37
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=93.35 E-value=0.76 Score=42.15 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=72.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-ecCC-----CHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-ETIP-----NKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ -|.. +.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 33 iD~~~l----~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 99 (304)
T 3l21_A 33 LDTATA----ARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA---------GTYDTAHS 99 (304)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHHH
Confidence 565554 77788888899998765 2322 567877888777663 3368999876 34566777
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 100 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 150 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIP 150 (304)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 247888877653 24567777788888888999999763
No 38
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=93.30 E-value=0.79 Score=41.74 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHHHHHHHHh-cCCCeEEE-----e-cCCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVE-SGPDLLAF-----E-TIPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKE 224 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~-~gvD~i~~-----E-T~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~ 224 (328)
++++.+ +..++.+.+ .|||.|++ | ..-+.+|=+.+++.+.+. +.+.||++.. .+.+..+
T Consensus 21 iD~~~l----~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 87 (293)
T 1f6k_A 21 INEKGL----RQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---------GSVNLKE 87 (293)
T ss_dssp BCHHHH----HHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHH
T ss_pred cCHHHH----HHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHHH
Confidence 566654 677888888 99999875 3 123556777777776653 3368999776 3456778
Q ss_pred HHHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 225 CLDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 225 ~~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
+++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 88 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P 139 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIP 139 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECc
Confidence 8765532 247888877653 23556667777777788999999874
No 39
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=93.29 E-value=0.8 Score=42.02 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEe-c-----CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFE-T-----IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T-----~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+. ++..++.+.+.|||.|++- | .-+.+|=+.+++.+.+. +.++||++.. .+.+..++
T Consensus 32 iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 98 (307)
T 3s5o_A 32 VDYGK----LEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS---------GCESTQAT 98 (307)
T ss_dssp BCHHH----HHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec---------CCCCHHHH
Confidence 56664 4777888889999988642 2 12567878888887764 3368999876 34567778
Q ss_pred HHHHHh--cCCceEEEECCC-------ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-------PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-------~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..++ ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 99 i~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P 151 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVP 151 (307)
T ss_dssp HHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCC
Confidence 765532 257888888542 22456666777777788999999774
No 40
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=93.26 E-value=1 Score=41.02 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----e-cCCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----E-TIPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----E-T~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++++.+ +..++.+++.|||.|++ | ..-+.+|-+.+++.+.+. +...||++.. .+.+..++
T Consensus 21 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 87 (294)
T 3b4u_A 21 VDIDAM----IAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---------LVDSIEDA 87 (294)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCccHHHH
Confidence 566654 67788888899999875 3 223567878888887764 3358999887 34567788
Q ss_pred HHHHHh--cCCceEEEECCC------ChhhhHHHHHHHHhhc---CCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA------PPQFVENLICYFKELT---KKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~------~p~~~~~~l~~l~~~~---~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.+ +.|+++|=+-
T Consensus 88 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P 142 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIP 142 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 765532 257888888653 2244666667777777 8999999874
No 41
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=93.22 E-value=0.76 Score=42.49 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=72.2
Q ss_pred HHHHhcCCCeEEEecCCCH---------------------------HHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCC
Q 020275 167 QVLVESGPDLLAFETIPNK---------------------------LEAQALVELLEEENIQIPSWICFSSVDGENAPSG 219 (328)
Q Consensus 167 ~~l~~~gvD~i~~ET~~~~---------------------------~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G 219 (328)
+.+.+.|+.++..||++-. ...+..++.+++.+.+.|+.+++....+. ...
T Consensus 72 ~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~--~i~ 149 (336)
T 1f76_A 72 DALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDT--PVE 149 (336)
T ss_dssp HHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTTS--CGG
T ss_pred HHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCCC--ccc
Confidence 3455789999988887521 11244455555543346898888532211 111
Q ss_pred CCHH---HHHHHHHhcCCceEEEECCCChh-----------hhHHHHHHHHhhc---------CCeEEEEeCCCCccCCc
Q 020275 220 ESFK---ECLDIINKSGKVNAVGINCAPPQ-----------FVENLICYFKELT---------KKAIVVYPNSGEVWDGR 276 (328)
Q Consensus 220 ~~~~---~~~~~~~~~~~~~~iGvNC~~p~-----------~~~~~l~~l~~~~---------~~pl~~ypN~g~~~d~~ 276 (328)
...+ ++++.+.. ++++|-+|+.+|. .+..+++.+++.. +.|++++-+.+
T Consensus 150 ~~~~~~~~aa~~~~~--g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~------ 221 (336)
T 1f76_A 150 QGKDDYLICMEKIYA--YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD------ 221 (336)
T ss_dssp GTHHHHHHHHHHHGG--GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC------
T ss_pred ccHHHHHHHHHHHhc--cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC------
Confidence 1234 34444432 5788888886552 2345666666655 68998864421
Q ss_pred cccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 277 AKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
.+.++..+.++.+.+.|+..|
T Consensus 222 ---------~~~~~~~~~a~~l~~~Gvd~i 242 (336)
T 1f76_A 222 ---------LSEEELIQVADSLVRHNIDGV 242 (336)
T ss_dssp ---------CCHHHHHHHHHHHHHTTCSEE
T ss_pred ---------CCHHHHHHHHHHHHHcCCcEE
Confidence 245678888888999998654
No 42
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=93.22 E-value=0.98 Score=41.35 Aligned_cols=104 Identities=20% Similarity=0.160 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 29 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~a 95 (303)
T 2wkj_A 29 LDKASL----RRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV---------GCVSTAES 95 (303)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 565554 67788888899999876 32 23567777787776653 3368999876 34567777
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcC-CeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTK-KAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~-~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++ .|+++|=+-
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P 147 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIP 147 (303)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECH
T ss_pred HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCc
Confidence 765532 247888877653 23556777778888788 999999764
No 43
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=93.18 E-value=1.1 Score=40.81 Aligned_cols=104 Identities=12% Similarity=0.146 Sum_probs=71.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEe-cC-----CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFE-TI-----PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T~-----~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+. ++.+++.+++.|||.|++- |. -+.+|=+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 20 iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 86 (292)
T 3daq_A 20 VNLEA----LKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---------GTNDTEKS 86 (292)
T ss_dssp ECHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 56554 4777888889999998752 22 2467777787776653 3368999876 34567777
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 87 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P 137 (292)
T 3daq_A 87 IQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVP 137 (292)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 765532 247788777653 23556777778888789999999764
No 44
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=93.08 E-value=2.8 Score=40.28 Aligned_cols=135 Identities=12% Similarity=0.147 Sum_probs=88.9
Q ss_pred HHHHHHHHhcCCCeEEEecCC---------------CHHHHHHHHHHHH----hcCCCccEEEEEEecCCC---------
Q 020275 163 RRRLQVLVESGPDLLAFETIP---------------NKLEAQALVELLE----EENIQIPSWICFSSVDGE--------- 214 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~---------------~~~E~~a~~~~~~----~~~~~~pv~is~~~~~~~--------- 214 (328)
.+.++.|.++||-.|.+|-.. +.+|...=+++++ ..+ .+++|---.+...
T Consensus 163 ~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g--~d~vIiARTDA~~a~l~~s~~d 240 (433)
T 3eol_A 163 FEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMG--TPTLIVARTDAEAAKLLTSDID 240 (433)
T ss_dssp HHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCS
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcC--CCEEEEEEcCCccccccccCcc
Confidence 457889999999999999654 3455444344433 333 5677666665421
Q ss_pred ------------CCCCC-----CCHHHHHHHHHh-cCCceEEEECCC--ChhhhHHHHHHHHhhcCCeEEEEeCCCCccC
Q 020275 215 ------------NAPSG-----ESFKECLDIINK-SGKVNAVGINCA--PPQFVENLICYFKELTKKAIVVYPNSGEVWD 274 (328)
Q Consensus 215 ------------~l~~G-----~~~~~~~~~~~~-~~~~~~iGvNC~--~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d 274 (328)
++..| ..++++++.... ..+.++|=+-.. .++.+..+.+.++...+.++++|+++..
T Consensus 241 ~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~If~e~~~~~~eei~~f~~~v~~~~P~~~L~~~~sPs--- 317 (433)
T 3eol_A 241 ERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAPYCDLIWMETSKPDLAQARRFAEAVHKAHPGKLLAYNCSPS--- 317 (433)
T ss_dssp TTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCCEEEECCSS---
T ss_pred cccccceeccCcccccccccccCCHHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHhcccCCCcccccCCCCC---
Confidence 22222 568888876543 126788877553 4788888888887655677788876531
Q ss_pred CccccccCCCCCChhHHHHHHHHHHHcCCeEEe
Q 020275 275 GRAKKWLPSKCLGDGKFESFATRWRDSGAKLIG 307 (328)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiG 307 (328)
-.|... ++++++..+..++.+.|++++=
T Consensus 318 ---fnw~~~--~~~~~~~~f~~eLa~lGv~~v~ 345 (433)
T 3eol_A 318 ---FNWKKN--LDDATIAKFQRELGAMGYKFQF 345 (433)
T ss_dssp ---SCHHHH--SCHHHHHHHHHHHHHHTEEEEE
T ss_pred ---Cccccc--CChhHHhHHHHHHHHcCCeEEE
Confidence 124322 5688899999999999987654
No 45
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=93.06 E-value=3 Score=40.02 Aligned_cols=135 Identities=13% Similarity=0.131 Sum_probs=89.5
Q ss_pred HHHHHHHHhcCCCeEEEecCC---------------CHHHHHHHHHHHH----hcCCCccEEEEEEecCCC---------
Q 020275 163 RRRLQVLVESGPDLLAFETIP---------------NKLEAQALVELLE----EENIQIPSWICFSSVDGE--------- 214 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~---------------~~~E~~a~~~~~~----~~~~~~pv~is~~~~~~~--------- 214 (328)
.+.++.|.++|+-.+.+|-.. +.+|+..=+++++ +. +.|++|---++...
T Consensus 170 ~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~--~~d~~IiARTDa~aa~l~~s~~d 247 (435)
T 3lg3_A 170 FELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVL--GVPTLLIARTDADAADLLTSDCD 247 (435)
T ss_dssp HHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHH--TCCCEEEEEECTTTCCEESCCCC
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhc--CCCeEEEEEcCCccccccccccc
Confidence 457888999999999999653 3555544344433 33 36777776665422
Q ss_pred ----------CCCCC-----CCHHHHHHHHHh-cCCceEEEECCC--ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCc
Q 020275 215 ----------NAPSG-----ESFKECLDIINK-SGKVNAVGINCA--PPQFVENLICYFKELTKKAIVVYPNSGEVWDGR 276 (328)
Q Consensus 215 ----------~l~~G-----~~~~~~~~~~~~-~~~~~~iGvNC~--~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~ 276 (328)
++..| ..++++++.... ..+.++|=+-.. .++.+..+.+.++...+..+++|+++..
T Consensus 248 ~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPs----- 322 (435)
T 3lg3_A 248 PYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAPYADLVWCETSTPDLALAKRFADAVHAQFPGKLLAYNCSPS----- 322 (435)
T ss_dssp GGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSS-----
T ss_pred cccchhhcccccccccccccCCHHHHHHHHHHHHccCCEEEecCCCCCHHHHHHHHHHhccccCCeEEEeCCCCC-----
Confidence 12222 568888875532 126788877543 4677888888887655667788877532
Q ss_pred cccccCCCCCChhHHHHHHHHHHHcCCeEEe
Q 020275 277 AKKWLPSKCLGDGKFESFATRWRDSGAKLIG 307 (328)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiG 307 (328)
-.|... ++++++..+..++.+.|++++=
T Consensus 323 -fnw~~~--~~d~~~~~f~~eLa~lG~~~v~ 350 (435)
T 3lg3_A 323 -FNWKKN--LTDQQIASFQDELSAMGYKYQF 350 (435)
T ss_dssp -SCHHHH--SCHHHHHHHHHHHHHTTEEEEE
T ss_pred -cccccc--CCHHHHHHHHHHHHHcCCcEEE
Confidence 135332 5788999999999999987654
No 46
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.05 E-value=1.4 Score=40.15 Aligned_cols=105 Identities=14% Similarity=0.140 Sum_probs=72.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +.++||++... +.+..++
T Consensus 22 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~a 88 (300)
T 3eb2_A 22 VRADVM----GRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA---------STSVADA 88 (300)
T ss_dssp BCHHHH----HHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE---------ESSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHHH
Confidence 565554 77788888899999863 31 12567877888776663 33689999874 3456777
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNSG 270 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~g 270 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 89 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECcc
Confidence 765532 246777777542 245677777888888899999998754
No 47
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.88 E-value=0.68 Score=42.25 Aligned_cols=116 Identities=14% Similarity=0.079 Sum_probs=72.2
Q ss_pred HHHHHHhcCCCeEEEecCCCHHH-------------------------HHHHHHHHHhc--CC--CccEEEEEEecCCCC
Q 020275 165 RLQVLVESGPDLLAFETIPNKLE-------------------------AQALVELLEEE--NI--QIPSWICFSSVDGEN 215 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E-------------------------~~a~~~~~~~~--~~--~~pv~is~~~~~~~~ 215 (328)
.++.+.+.|+.++..+|++.... ....++.++.. .. +.|+++++.
T Consensus 28 ~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~------ 101 (311)
T 1jub_A 28 DLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIA------ 101 (311)
T ss_dssp HHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEEC------
T ss_pred HHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcC------
Confidence 34556778999888887764210 12222222211 12 589999984
Q ss_pred CCCCCCHHH---HHHHHHhcCCce-EEEECCC------------ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCcccc
Q 020275 216 APSGESFKE---CLDIINKSGKVN-AVGINCA------------PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKK 279 (328)
Q Consensus 216 l~~G~~~~~---~~~~~~~~~~~~-~iGvNC~------------~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~ 279 (328)
|.+.++ +++.+.+ .+++ +|=+|+. +|+.+..+++.+++..+.|++++-..+
T Consensus 102 ---g~~~~~~~~~a~~~~~-~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~--------- 168 (311)
T 1jub_A 102 ---GMSAAENIAMLKKIQE-SDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY--------- 168 (311)
T ss_dssp ---CSSHHHHHHHHHHHHH-SCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC---------
T ss_pred ---CCCHHHHHHHHHHHHh-cCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC---------
Confidence 445544 4444544 4677 7777775 345567788888877788998864321
Q ss_pred ccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 280 WLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
.+.+++.++++...+.|+..
T Consensus 169 ------~~~~~~~~~a~~~~~~G~d~ 188 (311)
T 1jub_A 169 ------FDLVHFDIMAEILNQFPLTY 188 (311)
T ss_dssp ------CSHHHHHHHHHHHTTSCCCE
T ss_pred ------CCHHHHHHHHHHHHHcCCcE
Confidence 24567888888888889754
No 48
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=92.81 E-value=1.1 Score=41.10 Aligned_cols=131 Identities=20% Similarity=0.209 Sum_probs=77.9
Q ss_pred HHHHhccceeecCCcCCChhhH-HhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeecCC-cccCc
Q 020275 62 EYLEAGADILVTSSYQATIPGF-LSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGS-YGAYL 139 (328)
Q Consensus 62 ~yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsiGP-~g~~l 139 (328)
.-+++|+++|.... .+|.... ...+.+.++.-+.....++.|++. +. .|-+.+.- ++.
T Consensus 89 ~a~~~g~~~v~i~~-~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~---------------G~--~v~~~i~~~~~~-- 148 (307)
T 1ydo_A 89 NALEGGINEACVFM-SASETHNRKNINKSTSESLHILKQVNNDAQKA---------------NL--TTRAYLSTVFGC-- 148 (307)
T ss_dssp HHHHHTCSEEEEEE-ESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT---------------TC--EEEEEEECTTCB--
T ss_pred HHHhCCcCEEEEEe-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC---------------CC--EEEEEEEEEecC--
Confidence 34678999988764 4454433 333667655555555555555532 22 23333322 111
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-c--CCCHHHHHHHHHHHHhcCCCcc-EEEEEEecCCCC
Q 020275 140 ADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-T--IPNKLEAQALVELLEEENIQIP-SWICFSSVDGEN 215 (328)
Q Consensus 140 ~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~~~~~~~~~~p-v~is~~~~~~~~ 215 (328)
||.+.+ +.+ ++.+.++.+.+.|+|.|.+- | +..+.++...++.+++. .| +-++|.+=++
T Consensus 149 ----~~~~~~----~~~----~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~---~~~~~l~~H~Hnd-- 211 (307)
T 1ydo_A 149 ----PYEKDV----PIE----QVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR---FPANQIALHFHDT-- 211 (307)
T ss_dssp ----TTTBCC----CHH----HHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT---SCGGGEEEECBGG--
T ss_pred ----CcCCCC----CHH----HHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh---CCCCeEEEEECCC--
Confidence 334433 444 55667777888999988655 4 35778999999988864 33 4567766443
Q ss_pred CCCCCCHHHHHHHHHh
Q 020275 216 APSGESFKECLDIINK 231 (328)
Q Consensus 216 l~~G~~~~~~~~~~~~ 231 (328)
.|..+..++..+..
T Consensus 212 --~Gla~AN~laAv~a 225 (307)
T 1ydo_A 212 --RGTALANMVTALQM 225 (307)
T ss_dssp --GSCHHHHHHHHHHH
T ss_pred --CchHHHHHHHHHHh
Confidence 36777777776654
No 49
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=92.65 E-value=2.4 Score=38.98 Aligned_cols=43 Identities=26% Similarity=0.258 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
-+|+++..++|+|.|++|-+++.+|++.+++.+. ++|+++.+.
T Consensus 181 i~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~----~~Pv~~n~~ 223 (307)
T 3lye_A 181 IERLRAARDEGADVGLLEGFRSKEQAAAAVAALA----PWPLLLNSV 223 (307)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT----TSCBEEEEE
T ss_pred HHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc----CCceeEEee
Confidence 6688999999999999999999999999988874 488887765
No 50
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=92.20 E-value=1.4 Score=41.10 Aligned_cols=102 Identities=11% Similarity=0.076 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----e-cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----E-TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL 226 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----E-T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 226 (328)
++++.+ +..++.+++.|||.|++ | ..-+.+|-+.+++. ...+ ++||++.. .+.+..+++
T Consensus 44 ID~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~g-rvpViaGv---------g~~st~eai 108 (344)
T 2hmc_A 44 PDFDAL----VRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKA-GIPVIVGT---------GAVNTASAV 108 (344)
T ss_dssp BCHHHH----HHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHT-TCCEEEEC---------CCSSHHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCC-CCcEEEec---------CCCCHHHHH
Confidence 566654 67788888899999875 3 22355777778877 3334 69999877 345677777
Q ss_pred HHHHh--cCCceEEEECCCC----h--hhhHHHHHHHHh-hcCCeEEEEeCC
Q 020275 227 DIINK--SGKVNAVGINCAP----P--QFVENLICYFKE-LTKKAIVVYPNS 269 (328)
Q Consensus 227 ~~~~~--~~~~~~iGvNC~~----p--~~~~~~l~~l~~-~~~~pl~~ypN~ 269 (328)
+..+. ..+++++.+-.-. | +.+....+.+.+ .++.|+++|=+-
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred HHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 65532 2478888887632 2 446666677777 778999999653
No 51
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=91.86 E-value=2.7 Score=38.07 Aligned_cols=102 Identities=13% Similarity=0.233 Sum_probs=70.2
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----e-cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----E-TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL 226 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----E-T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 226 (328)
++.+.+ +..++.+++.|||.|++ | ..-+.+|-+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGv---------g~~~t~~ai 81 (288)
T 2nuw_A 17 VNVDAL----KTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQV---------GSLNLNDVM 81 (288)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEee---------CCCCHHHHH
Confidence 565554 67788888899999876 4 223567888888888876423 55444 345677887
Q ss_pred HHHHh--cCCceEEEECCC------ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 227 DIINK--SGKVNAVGINCA------PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 227 ~~~~~--~~~~~~iGvNC~------~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
+..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 132 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYP 132 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 65532 357888888653 22446666677778788999999764
No 52
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=91.76 E-value=3.1 Score=37.60 Aligned_cols=102 Identities=11% Similarity=0.085 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----e-cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----E-TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL 226 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----E-T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 226 (328)
++.+.+ +..++.+++.|||.|++ | ..-+.+|=+.+++.+.+...+ |++.. .+.+..+++
T Consensus 16 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gv---------g~~~t~~ai 80 (286)
T 2r91_A 16 LDPELF----ANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQV---------ASLNADEAI 80 (286)
T ss_dssp ECHHHH----HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEEC---------CCSSHHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEee---------CCCCHHHHH
Confidence 565554 67788888899999875 3 223567878888887776423 55444 345677887
Q ss_pred HHHHh--cCCceEEEECCCC------hhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 227 DIINK--SGKVNAVGINCAP------PQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 227 ~~~~~--~~~~~~iGvNC~~------p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
+..+. ..+++++.+-.-. .+.+....+.+.+.++.|+++|=+-
T Consensus 81 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 131 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYP 131 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCh
Confidence 65532 2578888886531 2446666677777788999999874
No 53
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=91.52 E-value=1.7 Score=40.77 Aligned_cols=140 Identities=17% Similarity=0.189 Sum_probs=86.9
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
..|+..|.++|+|++=+ |+|+.++++++-+ +++.. ++|++.-+.++ ...+...++ .+++.+=||=
T Consensus 49 v~Qi~~l~~aG~diVRv-avp~~~~a~al~~-I~~~~-~vPlvaDiHf~----------~~lal~a~e--~G~dklRINP 113 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRV-AVPHKEDVEALEE-IVKKS-PMPVIADIHFA----------PSYAFLSME--KGVHGIRINP 113 (366)
T ss_dssp HHHHHHHHHTTCCEEEE-ECCSHHHHHHHHH-HHHHC-SSCEEEECCSC----------HHHHHHHHH--TTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEe-CCCChHHHHHHHH-HHhcC-CCCEEEeCCCC----------HHHHHHHHH--hCCCeEEECC
Confidence 67999999999999986 8899777655544 55543 69999887662 123444443 3677888886
Q ss_pred C---ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHH----HHcCC-eEEeecCCCCh
Q 020275 243 A---PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRW----RDSGA-KLIGGCCRTTP 314 (328)
Q Consensus 243 ~---~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~-~iiGGCCGt~P 314 (328)
. ..+.+..+++..+++ +.|+-+=-|+|.+...-...|-. -+|+.+.+.+.+. .+.|- +|+=-|=.+++
T Consensus 114 GNig~~~~~~~vv~~ak~~-~~piRIGvN~GSL~~~ll~~yg~---~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~v 189 (366)
T 3noy_A 114 GNIGKEEIVREIVEEAKRR-GVAVRIGVNSGSLEKDLLEKYGY---PSAEALAESALRWSEKFEKWGFTNYKVSIKGSDV 189 (366)
T ss_dssp HHHSCHHHHHHHHHHHHHH-TCEEEEEEEGGGCCHHHHHHHSS---CCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSH
T ss_pred cccCchhHHHHHHHHHHHc-CCCEEEecCCcCCCHHHHHhcCC---CCHHHHHHHHHHHHHHHHhCCCCeEEEeeecCCh
Confidence 4 356667777777664 78988888998542211111211 2577777665444 45564 55533444443
Q ss_pred -HHHHHHH
Q 020275 315 -STIQAVS 321 (328)
Q Consensus 315 -~hI~al~ 321 (328)
.-|++-+
T Consensus 190 ~~~i~ayr 197 (366)
T 3noy_A 190 LQNVRANL 197 (366)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 3444443
No 54
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=91.37 E-value=2.9 Score=37.91 Aligned_cols=131 Identities=16% Similarity=0.090 Sum_probs=75.8
Q ss_pred HHHHhccceeecCCcCCChhhH-HhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe--ecCCcccC
Q 020275 62 EYLEAGADILVTSSYQATIPGF-LSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA--SIGSYGAY 138 (328)
Q Consensus 62 ~yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG--siGP~g~~ 138 (328)
.-+++|+++|.... .+|.... ...+.+.++.-+....+++.|++. +.++.+.- ++|+
T Consensus 88 ~a~~ag~~~v~i~~-~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~---------------G~~v~~~l~~~~~~---- 147 (298)
T 2cw6_A 88 AAVAAGAKEVVIFG-AASELFTKKNINCSIEESFQRFDAILKAAQSA---------------NISVRGYVSCALGC---- 147 (298)
T ss_dssp HHHHTTCSEEEEEE-ESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHT---------------TCEEEEEEETTTCB----
T ss_pred HHHHCCCCEEEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC---------------CCeEEEEEEEEeeC----
Confidence 34678999888743 4454433 233666555555555555555432 22332222 2333
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-cC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCC
Q 020275 139 LADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-TI--PNKLEAQALVELLEEENIQIPSWICFSSVDGEN 215 (328)
Q Consensus 139 l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~ 215 (328)
||.+.+ +.+ ++.+.++.+.+.|+|.|.+- |+ -++.++..+++.+++.-.+.| ++|.+-++
T Consensus 148 -----~~~~~~----~~~----~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--i~~H~Hn~-- 210 (298)
T 2cw6_A 148 -----PYEGKI----SPA----KVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAA--LAVHCHDT-- 210 (298)
T ss_dssp -----TTTBSC----CHH----HHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGG--EEEEEBCT--
T ss_pred -----CcCCCC----CHH----HHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEECCC--
Confidence 333433 444 45667777888999998543 43 467898999998887521244 56666444
Q ss_pred CCCCCCHHHHHHHHHh
Q 020275 216 APSGESFKECLDIINK 231 (328)
Q Consensus 216 l~~G~~~~~~~~~~~~ 231 (328)
.|..+..++..+..
T Consensus 211 --~Gla~An~laA~~a 224 (298)
T 2cw6_A 211 --YGQALANTLMALQM 224 (298)
T ss_dssp --TSCHHHHHHHHHHT
T ss_pred --CchHHHHHHHHHHh
Confidence 36666666666654
No 55
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=91.36 E-value=3.8 Score=37.13 Aligned_cols=102 Identities=12% Similarity=0.145 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----e-cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----E-TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL 226 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----E-T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 226 (328)
++.+.+ +..++.+.+.|||.|++ | ..-+.+|=+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGv---------g~~~t~~ai 81 (293)
T 1w3i_A 17 IDKEKL----KIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQV---------GGLNLDDAI 81 (293)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEec---------CCCCHHHHH
Confidence 566554 67788888899998765 3 123567888888888876423 55444 345678888
Q ss_pred HHHHh--cCCceEEEECCC------ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 227 DIINK--SGKVNAVGINCA------PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 227 ~~~~~--~~~~~~iGvNC~------~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
+..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 132 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYP 132 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECc
Confidence 76643 257888877543 22446666677777788999999874
No 56
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=91.06 E-value=1.4 Score=41.21 Aligned_cols=113 Identities=14% Similarity=0.085 Sum_probs=67.9
Q ss_pred cCCCeEEEecCCCHHHHH----HHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCCh--
Q 020275 172 SGPDLLAFETIPNKLEAQ----ALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPP-- 245 (328)
Q Consensus 172 ~gvD~i~~ET~~~~~E~~----a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p-- 245 (328)
+|+++++-|.+..-..+. .+++ +.+ .+.|+++++... +-..+.++++.+.+ .+.++|-|||..|
T Consensus 27 Gg~gli~te~~~~~~~~~~~~~~~~~-~~~--~~~p~~vQL~g~------~p~~~~~aA~~a~~-~G~D~IeIn~gcP~~ 96 (350)
T 3b0p_A 27 SLGVRLYTEMTVDQAVLRGNRERLLA-FRP--EEHPIALQLAGS------DPKSLAEAARIGEA-FGYDEINLNLGCPSE 96 (350)
T ss_dssp CSSSBEECCCEEHHHHHHSCHHHHHC-CCG--GGCSEEEEEECS------CHHHHHHHHHHHHH-TTCSEEEEEECCCSH
T ss_pred CCCCEEEeCCEEechhhcCCHHHHhc-cCC--CCCeEEEEeCCC------CHHHHHHHHHHHHH-cCCCEEEECCcCCCC
Confidence 567999999775322111 1222 122 258999999621 12345566666654 5789999998543
Q ss_pred ---------------hhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 246 ---------------QFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 246 ---------------~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
+.+..+++.+++..+.|+.+.-..| |... .+.++..++++.+.+.|+..
T Consensus 97 ~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g---------~~~~--~~~~~~~~~a~~l~~aG~d~ 160 (350)
T 3b0p_A 97 KAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLG---------LEGK--ETYRGLAQSVEAMAEAGVKV 160 (350)
T ss_dssp HHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC---------BTTC--CCHHHHHHHHHHHHHTTCCE
T ss_pred cCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC---------cCcc--ccHHHHHHHHHHHHHcCCCE
Confidence 2355667777777788988844322 1111 13446777788888888743
No 57
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=90.83 E-value=1.9 Score=39.56 Aligned_cols=99 Identities=10% Similarity=0.057 Sum_probs=68.9
Q ss_pred HHHHHHHHHhcCCCeEE-EecCC-----CHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHHHHHHHh--c
Q 020275 162 HRRRLQVLVESGPDLLA-FETIP-----NKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKECLDIINK--S 232 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~-~ET~~-----~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~ 232 (328)
.+..++.+++.|||.|+ +-|.. +.+|-+.+++.+.+. +.+.||++.. .+.+..++++..+. .
T Consensus 30 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv---------g~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 30 IPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV---------GTNDTRDSIEFVKEVAE 100 (311)
T ss_dssp HHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC---------CCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHHHHHHHHHHh
Confidence 47778888899999765 34432 567888888887764 3368999876 34567788765533 2
Q ss_pred CCc-eEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 233 GKV-NAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 233 ~~~-~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
.+. +++.+-.- +.+.+....+.+.+.++.|+++|=+-
T Consensus 101 ~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 143 (311)
T 3h5d_A 101 FGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIP 143 (311)
T ss_dssp SCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECH
T ss_pred cCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 354 77777652 23556777788888888999999763
No 58
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=90.81 E-value=2.7 Score=37.74 Aligned_cols=40 Identities=30% Similarity=0.360 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 160 DFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 160 ~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
+--.++++++.++|+|.|++|-+|. ++++.+.+.+ +.|++
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l-----~iP~i 200 (264)
T 1m3u_A 161 DQLLSDALALEAAGAQLLVLECVPV-ELAKRITEAL-----AIPVI 200 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHHHC-----SSCEE
T ss_pred HHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHHhC-----CCCEE
Confidence 5556688999999999999999984 5555444433 47855
No 59
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.76 E-value=4.4 Score=36.83 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=81.4
Q ss_pred CChHHHHHHHHHHHHhccceeecCCcCCChhhH-HhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 51 KQPHLVKRVHLEYLEAGADILVTSSYQATIPGF-LSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 51 ~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
.+.+.|++ -+++|++.|.... .+|.... ...+.+.++.-+..+..++.|++. .+.|-
T Consensus 84 ~~~~~i~~----a~~aG~~~v~i~~-~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~-----------------G~~V~ 141 (302)
T 2ftp_A 84 PNLKGFEA----ALESGVKEVAVFA-AASEAFSQRNINCSIKDSLERFVPVLEAARQH-----------------QVRVR 141 (302)
T ss_dssp CSHHHHHH----HHHTTCCEEEEEE-ESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT-----------------TCEEE
T ss_pred CCHHHHHH----HHhCCcCEEEEEE-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-----------------CCeEE
Confidence 34444444 4678999887643 3444333 333667665555556666655532 24466
Q ss_pred eecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec---CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 130 ASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET---IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 130 GsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET---~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
+.|+-... .||.+. .+.++ ..+.++.+.+.|+|.|.+=+ +..+.+....++.+++.-.+.| +
T Consensus 142 ~~l~~~~~-----~e~~~~----~~~~~----~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--l 206 (302)
T 2ftp_A 142 GYISCVLG-----CPYDGD----VDPRQ----VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRER--L 206 (302)
T ss_dssp EEEECTTC-----BTTTBC----CCHHH----HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGG--E
T ss_pred EEEEEEee-----CCcCCC----CCHHH----HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCe--E
Confidence 66655321 133332 35554 45666777789999986653 3467888888888875421244 5
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHh
Q 020275 207 CFSSVDGENAPSGESFKECLDIINK 231 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~ 231 (328)
+|.+=++ .|..+..++..+..
T Consensus 207 ~~H~Hn~----~Gla~An~laAv~a 227 (302)
T 2ftp_A 207 AGHFHDT----YGQALANIYASLLE 227 (302)
T ss_dssp EEEEBCT----TSCHHHHHHHHHHT
T ss_pred EEEeCCC----ccHHHHHHHHHHHh
Confidence 6655333 57778888877764
No 60
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=90.43 E-value=9.3 Score=34.07 Aligned_cols=194 Identities=19% Similarity=0.243 Sum_probs=107.1
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCC--ChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceE
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQA--TIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRAL 127 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~a--s~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~ 127 (328)
..++|...++=+.--++||++|.--||.. ++... .|+. ....+..++++++. .+.
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~--~g~~--------~egl~~l~~~~~~~-------------Gl~ 89 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSF--QGYG--------EKALRWMREAADEY-------------GLV 89 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSC--CCCT--------HHHHHHHHHHHHHH-------------TCE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccc--cCcc--------HHHHHHHHHHHHHc-------------CCc
Confidence 57789988888888999999999888743 22111 1332 34455555555443 233
Q ss_pred EEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 128 VAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 128 VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
++-++ + + ..+++.+.+. +|++-+- ++.+.. .++.+... ++||.
T Consensus 90 ~~te~----------------~----d--------~~~~~~l~~~-vd~~kIga~~~~n~~----ll~~~a~~--~kPV~ 134 (262)
T 1zco_A 90 TVTEV----------------M----D--------TRHVELVAKY-SDILQIGARNSQNFE----LLKEVGKV--ENPVL 134 (262)
T ss_dssp EEEEC----------------C----C--------GGGHHHHHHH-CSEEEECGGGTTCHH----HHHHHTTS--SSCEE
T ss_pred EEEee----------------C----C--------HHhHHHHHhh-CCEEEECcccccCHH----HHHHHHhc--CCcEE
Confidence 44433 1 1 2245666666 8888765 344432 22333333 58999
Q ss_pred EEEEecCCCCCCCCC--CHHHH---HHHHHhcCCceEEEE----CCCC---hhhhH-HHHHHHHhhcCCeEEEEeCCCCc
Q 020275 206 ICFSSVDGENAPSGE--SFKEC---LDIINKSGKVNAVGI----NCAP---PQFVE-NLICYFKELTKKAIVVYPNSGEV 272 (328)
Q Consensus 206 is~~~~~~~~l~~G~--~~~~~---~~~~~~~~~~~~iGv----NC~~---p~~~~-~~l~~l~~~~~~pl~~ypN~g~~ 272 (328)
++- |+ +++++ ++.+........+.+ .|.. +..+. ..+..+++.++.|++++|+=+.
T Consensus 135 lk~----------G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~- 203 (262)
T 1zco_A 135 LKR----------GMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPA- 203 (262)
T ss_dssp EEC----------CTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTT-
T ss_pred Eec----------CCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCC-
Confidence 753 32 35554 444443323333333 4752 22222 5677777766788888876321
Q ss_pred cCCccccccCCCCCChhHHHHHHHHHHHcCCe--EE-----------eecCCCChHHHHHHHHHHh
Q 020275 273 WDGRAKKWLPSKCLGDGKFESFATRWRDSGAK--LI-----------GGCCRTTPSTIQAVSKVLK 325 (328)
Q Consensus 273 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--ii-----------GGCCGt~P~hI~al~~~l~ 325 (328)
+ ..+.....++..+..|+. +| -|-.--+|+..+.|-+.++
T Consensus 204 ----------g---~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~ 256 (262)
T 1zco_A 204 ----------G---RRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELE 256 (262)
T ss_dssp ----------C---SGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHH
T ss_pred ----------C---ccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHH
Confidence 0 111122334445666776 33 4556667777777766654
No 61
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=90.12 E-value=9.9 Score=34.25 Aligned_cols=171 Identities=16% Similarity=0.204 Sum_probs=84.8
Q ss_pred cCcchHHHHHHHhhcCCeEEE---ecchHHHHHHCCCCCC--CccchhhhcCCChHH----HHHH--HHHHHHhccc--e
Q 020275 4 ENTTASSLDDLIEKAGGCAVI---DGGFATQLETHGASIN--DPLWSALYLIKQPHL----VKRV--HLEYLEAGAD--I 70 (328)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~lvl---DGg~gt~L~~~G~~~~--~~lws~~~ll~~Pe~----V~~i--H~~yl~AGAd--i 70 (328)
++.+...|+++.++.+.+.++ |..+...+++.|++.- +- +.....+-.||. +.++ |-.-+..|++ .
T Consensus 2 ~~~t~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGd-Sl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~ 80 (275)
T 1o66_A 2 SLITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGD-SLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAM 80 (275)
T ss_dssp -CCCHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEECT-THHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSE
T ss_pred CCcCHHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECH-HHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCe
Confidence 356677888888753334444 8888999999998741 10 111122333432 3332 6666777776 2
Q ss_pred eecC----CcCCChhh-------HHhCCCCH---HHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeecCCcc
Q 020275 71 LVTS----SYQATIPG-------FLSRGLSI---EEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYG 136 (328)
Q Consensus 71 I~Tn----Ty~as~~~-------l~~~g~~~---~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsiGP~g 136 (328)
|..- +|+.|+.. +.+.|... +...+ -++..+.+++ ..+-|.|=||=++
T Consensus 81 vvaD~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg~e----~~~~I~al~~--------------agIpV~gHiGLtP 142 (275)
T 1o66_A 81 IVSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGGVW----MAETTEFLQM--------------RGIPVCAHIGLTP 142 (275)
T ss_dssp EEEECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECSGG----GHHHHHHHHH--------------TTCCEEEEEESCG
T ss_pred EEEECCCCCccCCHHHHHHHHHHHHHcCCcEEEECCcHH----HHHHHHHHHH--------------cCCCeEeeeccCc
Confidence 3332 66666542 22222110 00000 0111111111 1344677776433
Q ss_pred cCcCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 137 AYLADGSEYSGNYGPG-VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 137 ~~l~~~~eY~g~y~~~-~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
-.... .|.|.-. -+ ++ .+--.++++++.++|+|.|++|-+|. ++++.+.+.+ +.|++
T Consensus 143 Qs~~~----~ggf~v~grt-~~-a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l-----~iP~i 200 (275)
T 1o66_A 143 QSVFA----FGGYKVQGRG-GK-AQALLNDAKAHDDAGAAVVLMECVLA-ELAKKVTETV-----SCPTI 200 (275)
T ss_dssp GGTTC----------------C-HHHHHHHHHHHHHTTCSEEEEESCCH-HHHHHHHHHC-----SSCEE
T ss_pred eeecc----cCCeEEEeCh-HH-HHHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhC-----CCCEE
Confidence 22211 1333110 12 22 24446688999999999999999984 5555444433 47865
No 62
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=90.12 E-value=6.1 Score=38.35 Aligned_cols=99 Identities=11% Similarity=0.184 Sum_probs=67.9
Q ss_pred HHHHHHHHhcCCCeEE-EecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH---HHHhcCCceEE
Q 020275 163 RRRLQVLVESGPDLLA-FETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD---IINKSGKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~-~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~i 238 (328)
+..++...++|+|.|- |-..+++..++.+++++++.+ ..+..++++.+..+ .+++.+++ .+.+ .++..|
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~~----~~~e~~~~~a~~l~~-~Gad~I 175 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMG--AHAQGTLCYTTSPV----HNLQTWVDVAQQLAE-LGVDSI 175 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCCTT----CCHHHHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCC--CEEEEEEEeeeCCC----CCHHHHHHHHHHHHH-CCCCEE
Confidence 4456677789999885 445677788888999999886 66666665444332 24444443 3433 467777
Q ss_pred EEC----CCChhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 239 GIN----CAPPQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 239 GvN----C~~p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
.+- ...|..+..+++.+++..+.||.+...
T Consensus 176 ~l~DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~H 209 (464)
T 2nx9_A 176 ALKDMAGILTPYAAEELVSTLKKQVDVELHLHCH 209 (464)
T ss_dssp EEEETTSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred EEcCCCCCcCHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 663 235999999999998887788887664
No 63
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=90.11 E-value=5.5 Score=37.49 Aligned_cols=125 Identities=12% Similarity=0.037 Sum_probs=74.2
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhH-HhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGF-LSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+++-++.....-..+|.++|.+.. .+|.... ...+.+.++.-+.....++.|++. +.. |..
T Consensus 85 ~~~di~~a~~al~~ag~~~v~if~-~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~---------------g~~--v~~ 146 (370)
T 3rmj_A 85 IERDIRQAGEAVAPAPKKRIHTFI-ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREY---------------TDD--VEF 146 (370)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEE-ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTT---------------CSC--EEE
T ss_pred CHHHHHHHHHHHhhCCCCEEEEEe-cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHc---------------CCE--EEE
Confidence 566666665555568888877542 3344333 344777665555555555555421 222 222
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-c--CCCHHHHHHHHHHHHhcCCCc-cEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-T--IPNKLEAQALVELLEEENIQI-PSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~~~~~~~~~~-pv~i 206 (328)
+ + ||.+.+ +. +++.+.++.+.+.|+|.|.+- | +..+.++..+++.+++.-.+. .+.+
T Consensus 147 ~--~---------ed~~r~----~~----~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l 207 (370)
T 3rmj_A 147 S--C---------EDALRS----EI----DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVW 207 (370)
T ss_dssp E--E---------ETGGGS----CH----HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEE
T ss_pred e--c---------CCCCcc----CH----HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEE
Confidence 2 1 122222 33 456778888889999998665 4 356789999999888652111 1778
Q ss_pred EEEecCC
Q 020275 207 CFSSVDG 213 (328)
Q Consensus 207 s~~~~~~ 213 (328)
++.+=++
T Consensus 208 ~~H~Hnd 214 (370)
T 3rmj_A 208 SAHCHND 214 (370)
T ss_dssp EEECBCT
T ss_pred EEEeCCC
Confidence 8888665
No 64
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.72 E-value=6.1 Score=35.63 Aligned_cols=135 Identities=13% Similarity=0.036 Sum_probs=76.9
Q ss_pred HHHHHHhccceeecCCcCCChhhH-HhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeecCCcccC
Q 020275 60 HLEYLEAGADILVTSSYQATIPGF-LSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAY 138 (328)
Q Consensus 60 H~~yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~ 138 (328)
.+..+++|++.|.... .+|.... ...+.+.++.-+..+.+++.|++. .+.|-+.++-....
T Consensus 85 i~~a~~~G~~~V~i~~-~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~-----------------G~~V~~~l~~~~~~ 146 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFI-SASEGFSKANINCTIAESIERLSPVIGAAIND-----------------GLAIRGYVSCVVEC 146 (295)
T ss_dssp HHHHHHTTCSEEEEEE-ESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHT-----------------TCEEEEEEECSSEE
T ss_pred HHHHHHCCCCEEEEEE-ecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHc-----------------CCeEEEEEEEEecC
Confidence 3456789999887643 2343333 233556554445555555555532 23455555543211
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-c--CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCC
Q 020275 139 LADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-T--IPNKLEAQALVELLEEENIQIPSWICFSSVDGEN 215 (328)
Q Consensus 139 l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~ 215 (328)
||.+. .+.+++ .+.++.+.+.|+|.|.+- | +..+.+....++.+++.-...|+ .+.+-++
T Consensus 147 -----e~~~~----~~~~~~----~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l--~~H~Hn~-- 209 (295)
T 1ydn_A 147 -----PYDGP----VTPQAV----ASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSL--AGHYHDT-- 209 (295)
T ss_dssp -----TTTEE----CCHHHH----HHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGE--EEEEBCT--
T ss_pred -----CcCCC----CCHHHH----HHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeE--EEEECCC--
Confidence 22222 355554 555666777899998765 3 34678888888888864212454 5554332
Q ss_pred CCCCCCHHHHHHHHHh
Q 020275 216 APSGESFKECLDIINK 231 (328)
Q Consensus 216 l~~G~~~~~~~~~~~~ 231 (328)
.|..+..+...+..
T Consensus 210 --~Gla~an~l~Ai~a 223 (295)
T 1ydn_A 210 --GGRALDNIRVSLEK 223 (295)
T ss_dssp --TSCHHHHHHHHHHH
T ss_pred --cchHHHHHHHHHHh
Confidence 47777777777654
No 65
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=89.31 E-value=3.5 Score=38.68 Aligned_cols=102 Identities=12% Similarity=0.023 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ecC-CCHHHHHHHHHHHHh-cCCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ETI-PNKLEAQALVELLEE-ENIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET~-~~~~E~~a~~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
++.+.+ +..++.+++.|||.|++ |.. -+.+|=+.+++.+.+ .+..+||++.. .+.+..++
T Consensus 77 ID~~al----~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 143 (360)
T 4dpp_A 77 FDLEAY----DDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT---------GSNSTREA 143 (360)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHHHH
Confidence 565554 67788888899998877 421 256777777776655 33368999876 34567788
Q ss_pred HHHHHh--cCCceEEEECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 226 LDIINK--SGKVNAVGINCA-----PPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++..+. ..+++++.+-.- +.+.+....+.+.+. .|+++|=+-
T Consensus 144 i~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a--~PiilYNiP 192 (360)
T 4dpp_A 144 IHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM--GPTIIYNVP 192 (360)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG--SCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh--CCEEEEeCC
Confidence 775532 257888777653 223444555555543 599999764
No 66
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=88.88 E-value=13 Score=33.55 Aligned_cols=167 Identities=14% Similarity=0.137 Sum_probs=89.7
Q ss_pred ceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC---CC------HHHHHHHHHHH
Q 020275 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI---PN------KLEAQALVELL 195 (328)
Q Consensus 125 ~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~---~~------~~E~~a~~~~~ 195 (328)
+.+|-|-|-+++++..||..| .+.+++ ..+++.+++.|+|+|=+-.- |. .+|.+.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~-------~~~~~a----~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTH-------NSLIDA----VKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCC-------THHHHH----HHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccccc-------CCHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 467899999999888776432 244544 55677788899999855543 33 77877666555
Q ss_pred HhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC---hhhhHHHHHHHHhhcCCeEEEEeCCCCc
Q 020275 196 EEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP---PQFVENLICYFKELTKKAIVVYPNSGEV 272 (328)
Q Consensus 196 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~---p~~~~~~l~~l~~~~~~pl~~ypN~g~~ 272 (328)
+.......+.||+. -...+.+-+.++. ++. .||=++ -+.+.+++.+ .+.|+++.++.|..
T Consensus 83 ~~l~~~~~~piSID---------T~~~~va~aAl~a--Ga~--iINdvsg~~d~~~~~~~a~----~~~~vVlmh~~G~p 145 (282)
T 1aj0_A 83 EAIAQRFEVWISVD---------TSKPEVIRESAKV--GAH--IINDIRSLSEPGALEAAAE----TGLPVCLMHMQGNP 145 (282)
T ss_dssp HHHHHHCCCEEEEE---------CCCHHHHHHHHHT--TCC--EEEETTTTCSTTHHHHHHH----HTCCEEEECCSSCT
T ss_pred HHHHhhcCCeEEEe---------CCCHHHHHHHHHc--CCC--EEEECCCCCCHHHHHHHHH----hCCeEEEEccCCCC
Confidence 44210113445663 2233333334443 222 244433 2334444333 36899999987743
Q ss_pred cCCccccccCCCCCC-----hhHHHHHHHHHHHcCCe---EE---e-ecCCCChHHHHHHHHHH
Q 020275 273 WDGRAKKWLPSKCLG-----DGKFESFATRWRDSGAK---LI---G-GCCRTTPSTIQAVSKVL 324 (328)
Q Consensus 273 ~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~---ii---G-GCCGt~P~hI~al~~~l 324 (328)
.+. +-.+.. -+ .+.+.+.+....+.|+. || | |- +.+.+|--++-+.+
T Consensus 146 ~tm---~~~~~y-~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf-~k~~~~n~~ll~~l 204 (282)
T 1aj0_A 146 KTM---QEAPKY-DDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGF-GKNLSHNYSLLARL 204 (282)
T ss_dssp TCC---SCCCCC-SCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-SCCHHHHHHHHHTG
T ss_pred ccc---cccCcc-chHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCc-ccCHHHHHHHHHHH
Confidence 211 011110 01 23355566677788985 43 2 22 55677655444443
No 67
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=88.80 E-value=6 Score=38.03 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=30.4
Q ss_pred HHHHHHHHhcCCCeEEEec-CCCHHHHHHHHHHHHhc
Q 020275 163 RRRLQVLVESGPDLLAFET-IPNKLEAQALVELLEEE 198 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~~~~~~ 198 (328)
-+|..++.+ |+|+|++|+ .++++|++.++++++..
T Consensus 274 I~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~ 309 (439)
T 3i4e_A 274 ISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQ 309 (439)
T ss_dssp HHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhccc
Confidence 567788887 999999999 68999999999999853
No 68
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=88.56 E-value=5.4 Score=35.98 Aligned_cols=100 Identities=6% Similarity=0.054 Sum_probs=64.0
Q ss_pred HHHHHHHhcCCCeEEEec-CC--------------CHHHHHHHHHHHHhcCCCccEE--EE--EEecCCCCCCCCCCHHH
Q 020275 164 RRLQVLVESGPDLLAFET-IP--------------NKLEAQALVELLEEENIQIPSW--IC--FSSVDGENAPSGESFKE 224 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET-~~--------------~~~E~~a~~~~~~~~~~~~pv~--is--~~~~~~~~l~~G~~~~~ 224 (328)
+.++...++|+|.+.+-. .+ ++..++.+++.+++.+ ++|- |+ |.+.+..+ .+++.
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~~----~~~~~ 156 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDG--LAIRGYVSCVVECPYDGP----VTPQA 156 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECSSEETTTEE----CCHHH
T ss_pred HHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcC--CeEEEEEEEEecCCcCCC----CCHHH
Confidence 345667778999987753 23 4455566678888776 5555 44 33333322 45565
Q ss_pred HHHHHH---hcCCceEEEEC----CCChhhhHHHHHHHHhhcC-CeEEEEe--CCC
Q 020275 225 CLDIIN---KSGKVNAVGIN----CAPPQFVENLICYFKELTK-KAIVVYP--NSG 270 (328)
Q Consensus 225 ~~~~~~---~~~~~~~iGvN----C~~p~~~~~~l~~l~~~~~-~pl~~yp--N~g 270 (328)
+++.++ + .+++.|.+. ...|..+..+++.+++..+ .||.+.. +.|
T Consensus 157 ~~~~~~~~~~-~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 211 (295)
T 1ydn_A 157 VASVTEQLFS-LGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGG 211 (295)
T ss_dssp HHHHHHHHHH-HTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHHHh-cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 555443 3 356655544 2359999999999998877 6898888 555
No 69
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=88.46 E-value=0.57 Score=43.39 Aligned_cols=44 Identities=18% Similarity=0.034 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 161 FHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
.-.++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+.+.++
T Consensus 190 ~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l-----~~P~lan~~ 233 (318)
T 1zlp_A 190 EGIRRANLYKEAGADATFVEAPANVDELKEVSAKT-----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS-----CSEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc-----CCCEEEEec
Confidence 34668899999999999999999999999888765 389877654
No 70
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=88.40 E-value=13 Score=32.96 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=53.7
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCce-EEEEC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVN-AVGIN 241 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-~iGvN 241 (328)
..-++.+.++|+|.+++=-++. +|....++.+++.+ ++.+.-+. ..++.+.....+....+.. .+.++
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g--~~~i~l~~--------p~t~~~~i~~i~~~~~g~v~~~s~~ 180 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPV-EESAPFRQAALRHN--IAPIFICP--------PNADDDLLRQVASYGRGYTYLLSRS 180 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTT--CEEECEEC--------TTCCHHHHHHHHHHCCSCEEEESSS
T ss_pred HHHHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcC--CcEEEEEC--------CCCCHHHHHHHHhhCCCcEEEEecC
Confidence 3456778889999887765554 57788888888875 54433221 2244443333333322222 33444
Q ss_pred C-CC-----hhhhHHHHHHHHhhcCCeEEE
Q 020275 242 C-AP-----PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 242 C-~~-----p~~~~~~l~~l~~~~~~pl~~ 265 (328)
- +. +..+...++.+++..+.|+.+
T Consensus 181 G~tG~~~~~~~~~~~~i~~lr~~~~~pi~v 210 (268)
T 1qop_A 181 GVTGAENRGALPLHHLIEKLKEYHAAPALQ 210 (268)
T ss_dssp SCCCSSSCC--CCHHHHHHHHHTTCCCEEE
T ss_pred CcCCCccCCCchHHHHHHHHHhccCCcEEE
Confidence 2 11 244567888888877778765
No 71
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.37 E-value=12 Score=33.73 Aligned_cols=139 Identities=17% Similarity=0.121 Sum_probs=82.6
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLS-RGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~-~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
.++-++.....-..+|.+.|... ..+|...... .+.+.++.-+..+..++.|++. +.. |.+
T Consensus 78 ~~~di~~a~~~~~~ag~~~v~i~-~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~---------------g~~--v~~ 139 (293)
T 3ewb_X 78 VEGDIDRAEEALKDAVSPQIHIF-LATSDVHMEYKLKMSRAEVLASIKHHISYARQK---------------FDV--VQF 139 (293)
T ss_dssp SHHHHHHHHHHHTTCSSEEEEEE-EECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTT---------------CSC--EEE
T ss_pred CHHHHHHHHHHHhhcCCCEEEEE-ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhC---------------CCE--EEE
Confidence 44555555444445788877754 3445544433 3777665655566666655531 223 333
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-c--CCCHHHHHHHHHHHHhcCCCcc-EEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-T--IPNKLEAQALVELLEEENIQIP-SWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~~~~~~~~~~p-v~i 206 (328)
++ ||.+. .+. +++.+.++.+.+.|+|.|.+- | +..+.++...++.+++.-.+.+ +.+
T Consensus 140 ~~-----------~d~~~----~~~----~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l 200 (293)
T 3ewb_X 140 SP-----------EDATR----SDR----AFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIF 200 (293)
T ss_dssp EE-----------ETGGG----SCH----HHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEE
T ss_pred Ee-----------ccCCC----CCH----HHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceE
Confidence 32 11122 233 456777888889999998765 4 3577899999998886521232 778
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHh
Q 020275 207 CFSSVDGENAPSGESFKECLDIINK 231 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~ 231 (328)
++.+=++ .|..+..++..+..
T Consensus 201 ~~H~Hnd----~Gla~AN~laA~~a 221 (293)
T 3ewb_X 201 ASHCHDD----LGMATANALAAIEN 221 (293)
T ss_dssp EEECBCT----TSCHHHHHHHHHHT
T ss_pred EEEeCCC----cChHHHHHHHHHHh
Confidence 8887554 36666766666653
No 72
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=88.33 E-value=12 Score=36.93 Aligned_cols=99 Identities=11% Similarity=0.128 Sum_probs=66.8
Q ss_pred HHHHHHHHhcCCCeEE-EecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH---HHhcCCceEE
Q 020275 163 RRRLQVLVESGPDLLA-FETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI---INKSGKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~-~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~i 238 (328)
+..++.+.++|+|.|- |-..+++..++.+++++++.+ ..+-.+|++.+.. ..+++.+++. +.+ .++..|
T Consensus 120 ~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~-~Gad~I 192 (539)
T 1rqb_A 120 DRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAG--KHAQGTICYTISP----VHTVEGYVKLAGQLLD-MGADSI 192 (539)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCST----TCCHHHHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCC--CeEEEEEEeeeCC----CCCHHHHHHHHHHHHH-cCCCEE
Confidence 4456677789999885 446677788888899999886 5565566544332 2355544443 333 466666
Q ss_pred EEC----CCChhhhHHHHHHHHhhc--CCeEEEEeC
Q 020275 239 GIN----CAPPQFVENLICYFKELT--KKAIVVYPN 268 (328)
Q Consensus 239 GvN----C~~p~~~~~~l~~l~~~~--~~pl~~ypN 268 (328)
.+- ...|..+..+++.+++.. +.||.+...
T Consensus 193 ~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~H 228 (539)
T 1rqb_A 193 ALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCH 228 (539)
T ss_dssp EEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEB
T ss_pred EeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeC
Confidence 663 345999999999998877 568887664
No 73
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=88.31 E-value=12 Score=34.91 Aligned_cols=65 Identities=15% Similarity=0.102 Sum_probs=39.1
Q ss_pred HHHHHHHhcCCCeEEEe-------c--------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFE-------T--------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~E-------T--------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
+.++.+.+.|+|+|.+- | .|.+.-+..+.+++++. ++|++.+.-+ .+..+++..
T Consensus 157 e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVIA~GGI---------~~~~di~ka 225 (361)
T 3khj_A 157 EATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPIIADGGI---------RYSGDIGKA 225 (361)
T ss_dssp HHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHH--TCCEEEESCC---------CSHHHHHHH
T ss_pred HHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhc--CCeEEEECCC---------CCHHHHHHH
Confidence 35677888999999872 1 34444444444545544 4898865422 134566666
Q ss_pred HHhcCCceEEEEC
Q 020275 229 INKSGKVNAVGIN 241 (328)
Q Consensus 229 ~~~~~~~~~iGvN 241 (328)
+.. ++++|++-
T Consensus 226 la~--GAd~V~vG 236 (361)
T 3khj_A 226 LAV--GASSVMIG 236 (361)
T ss_dssp HHH--TCSEEEES
T ss_pred HHc--CCCEEEEC
Confidence 653 46666654
No 74
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=88.27 E-value=7.4 Score=38.01 Aligned_cols=66 Identities=14% Similarity=0.105 Sum_probs=42.8
Q ss_pred HHHHHHHhcCCCeEEEe-----c----------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFE-----T----------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~E-----T----------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
+.++.+.++|+|+|.+. . .|.+.-+..+.+++++. ++|++.+.-+ .+..+++..
T Consensus 284 e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVIa~GGI---------~~~~di~ka 352 (496)
T 4fxs_A 284 EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY--GIPVIADGGI---------RFSGDISKA 352 (496)
T ss_dssp HHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEESCC---------CSHHHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC--CCeEEEeCCC---------CCHHHHHHH
Confidence 35677888999999874 1 45555556666666655 4999865422 245667766
Q ss_pred HHhcCCceEEEECC
Q 020275 229 INKSGKVNAVGINC 242 (328)
Q Consensus 229 ~~~~~~~~~iGvNC 242 (328)
+.. +++++.+--
T Consensus 353 la~--GAd~V~iGs 364 (496)
T 4fxs_A 353 IAA--GASCVMVGS 364 (496)
T ss_dssp HHT--TCSEEEEST
T ss_pred HHc--CCCeEEecH
Confidence 653 567777654
No 75
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=88.24 E-value=7.1 Score=35.69 Aligned_cols=43 Identities=21% Similarity=0.283 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
-+|+++..++|+|.|++|-+.+.+|++.+++.+. ++|+++.+.
T Consensus 173 i~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~----~~Pl~~n~~ 215 (302)
T 3fa4_A 173 VARLRAARDAGADVGFLEGITSREMARQVIQDLA----GWPLLLNMV 215 (302)
T ss_dssp HHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT----TSCEEEECC
T ss_pred HHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc----CCceeEEEe
Confidence 6789999999999999999999999998887763 478877654
No 76
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=87.86 E-value=1.7 Score=39.77 Aligned_cols=91 Identities=15% Similarity=0.139 Sum_probs=55.8
Q ss_pred hcCCCeEEEecCCCHHHHH---HHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChh-
Q 020275 171 ESGPDLLAFETIPNKLEAQ---ALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQ- 246 (328)
Q Consensus 171 ~~gvD~i~~ET~~~~~E~~---a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~- 246 (328)
+.|+++++-|.+..-.... ...+.+ ....+.|+++++.- + +-+.+.+++..+.+ . .++|-|||..|.
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g----~--~~~~~~~aa~~a~~-~-~d~Iein~gcP~~ 96 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFG----S--EPNELSEAARILSE-K-YKWIDLNAGCPVR 96 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEEC----S--CHHHHHHHHHHHTT-T-CSEEEEEECCCCH
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCC----C--CHHHHHHHHHHHHH-h-CCEEEEECCCCcH
Confidence 4589999999764322111 011222 22336899999961 1 22345566665554 4 889999986542
Q ss_pred ----------------hhHHHHHHHHhhcCCeEEEEeCCC
Q 020275 247 ----------------FVENLICYFKELTKKAIVVYPNSG 270 (328)
Q Consensus 247 ----------------~~~~~l~~l~~~~~~pl~~ypN~g 270 (328)
.+..+++.+++..+.|+++.-..|
T Consensus 97 ~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G 136 (318)
T 1vhn_A 97 KVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG 136 (318)
T ss_dssp HHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred hcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC
Confidence 345567777777778998886655
No 77
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=87.83 E-value=0.62 Score=42.70 Aligned_cols=43 Identities=23% Similarity=0.320 Sum_probs=36.6
Q ss_pred HHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
-.++++++.++|+|.|++|.+++.++++.+.+.+ +.|+++.++
T Consensus 169 ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~iP~~~N~~ 211 (295)
T 1xg4_A 169 AIERAQAYVEAGAEMLFPEAITELAMYRQFADAV-----QVPILANIT 211 (295)
T ss_dssp HHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH-----CSCBEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc-----CCCEEEEec
Confidence 3668899999999999999999999999988877 378877664
No 78
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=87.69 E-value=2 Score=40.88 Aligned_cols=81 Identities=21% Similarity=0.311 Sum_probs=57.5
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHh---cCCCccEEEEEEecC---------------C-----CCCCCC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEE---ENIQIPSWICFSSVD---------------G-----ENAPSG 219 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~---~~~~~pv~is~~~~~---------------~-----~~l~~G 219 (328)
..|+..|.++|+|++-+ |+|+.++++++-+..++ .+.+.|++.-|.|+. . |+..++
T Consensus 41 v~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~ 119 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG 119 (406)
T ss_dssp HHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST
T ss_pred HHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc
Confidence 56999999999999986 69999998877654433 455799998888752 1 233333
Q ss_pred C----CHHHHHHHHHhcCCceEEEECCCC
Q 020275 220 E----SFKECLDIINKSGKVNAVGINCAP 244 (328)
Q Consensus 220 ~----~~~~~~~~~~~~~~~~~iGvNC~~ 244 (328)
. -+.++++.+.+..-+.=||+|..+
T Consensus 120 ~k~~e~~~~vv~~ak~~~~pIRIGVN~GS 148 (406)
T 4g9p_A 120 RHKDEHFAEMIRIAMDLGKPVRIGANWGS 148 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEGGG
T ss_pred ccHHHHHHHHHHHHHHccCCceecccccc
Confidence 1 245666666554567889999986
No 79
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=87.63 E-value=13 Score=35.61 Aligned_cols=136 Identities=10% Similarity=0.117 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCeEEEecCC---------------CHHHHHHHHHHHHhcC--CCccEEEEEEecCCCC----------
Q 020275 163 RRRLQVLVESGPDLLAFETIP---------------NKLEAQALVELLEEEN--IQIPSWICFSSVDGEN---------- 215 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~---------------~~~E~~a~~~~~~~~~--~~~pv~is~~~~~~~~---------- 215 (328)
.+.++.|.++|+-.+.+|-.. +..|...=+++++... .+.|++|---.+....
T Consensus 166 ~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~ 245 (429)
T 1f8m_A 166 YELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDER 245 (429)
T ss_dssp HHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTT
T ss_pred HHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhcccccccccc
Confidence 457889999999999999654 2456554455544321 1467777766654321
Q ss_pred ---------CCC-----CCCHHHHHHHHHh-cCCceEEEECC-C-ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccc
Q 020275 216 ---------APS-----GESFKECLDIINK-SGKVNAVGINC-A-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAK 278 (328)
Q Consensus 216 ---------l~~-----G~~~~~~~~~~~~-~~~~~~iGvNC-~-~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~ 278 (328)
.+. ...++++++.... ..+.++|=+-. . .++.+..+.+.+....+..+++|+.+.. -
T Consensus 246 d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~gAD~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n~sPs------f 319 (429)
T 1f8m_A 246 DQPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPS------F 319 (429)
T ss_dssp TGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCTT------S
T ss_pred ccccccCCCCcccccccccCHHHHHHHHHHHHhcCCEEEeCCCCCCHHHHHHHHHHhcccCCCceeecCCCCC------C
Confidence 111 2468888875533 12577777753 3 5788888888886433343677876421 1
Q ss_pred cccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 279 KWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
.|... ++++++..|..++.+.|++++
T Consensus 320 ~w~~~--~~~~~~~~f~~eL~~lG~~~v 345 (429)
T 1f8m_A 320 NWKKH--LDDATIAKFQKELAAMGFKFQ 345 (429)
T ss_dssp CHHHH--CCHHHHHHHHHHHHHHTEEEE
T ss_pred Ccccc--cchhhHhHHHHHHHHcCCeEE
Confidence 24222 578889999999999998554
No 80
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=87.55 E-value=0.87 Score=41.76 Aligned_cols=43 Identities=19% Similarity=0.274 Sum_probs=37.0
Q ss_pred HHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
--+|+++..++|+|+|++|.+++.+|++.+++.+ +.|+++.++
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~-----~~Pl~~n~~ 215 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAV-----KVPILANLT 215 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHH-----CSCBEEECC
T ss_pred HHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHc-----CCCeEEEec
Confidence 4568899999999999999999999999988876 288887765
No 81
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=87.33 E-value=3.9 Score=38.32 Aligned_cols=78 Identities=14% Similarity=0.116 Sum_probs=52.6
Q ss_pred CccEEEEEEecCCCCCCCCCCHHH---HHHHHHh--cCCceEEEECCCC------------hhhhHHHHHHHHhhcCCeE
Q 020275 201 QIPSWICFSSVDGENAPSGESFKE---CLDIINK--SGKVNAVGINCAP------------PQFVENLICYFKELTKKAI 263 (328)
Q Consensus 201 ~~pv~is~~~~~~~~l~~G~~~~~---~~~~~~~--~~~~~~iGvNC~~------------p~~~~~~l~~l~~~~~~pl 263 (328)
+.|+++++. |.+.++ +++.+.. ..++++|=|||+. |+.+..+++.+++..+.|+
T Consensus 126 ~~pvivsI~---------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV 196 (354)
T 4ef8_A 126 KKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp TCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCE
T ss_pred CCcEEEEec---------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCe
Confidence 589999983 545554 4444431 1256788899862 4667778888888888899
Q ss_pred EEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcC
Q 020275 264 VVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSG 302 (328)
Q Consensus 264 ~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G 302 (328)
.++---+ ++.+++++.+..+.+.|
T Consensus 197 ~vKi~p~---------------~d~~~~~~~a~~~~~~G 220 (354)
T 4ef8_A 197 GVKMPPY---------------FDFAHFDAAAEILNEFP 220 (354)
T ss_dssp EEEECCC---------------CSHHHHHHHHHHHHTCT
T ss_pred EEEecCC---------------CCHHHHHHHHHHHHhCC
Confidence 8854311 24667888777777777
No 82
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=87.29 E-value=14 Score=34.71 Aligned_cols=66 Identities=17% Similarity=0.153 Sum_probs=44.3
Q ss_pred HHHHHHHHhcCCCeEEEecCC-CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIP-NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~-~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.++++.++++|+|+|.+.|.. +..+....++.+++...+.|+++.. ..+.+++....+. ++++|.+
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~A~~a~~a--GAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARALIEA--GVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHHHHHHHHH--TCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee----------eCCHHHHHHHHHc--CCCEEEE
Confidence 568999999999999987643 3345555566666553257887642 2356666665543 6778777
No 83
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=87.17 E-value=18 Score=33.31 Aligned_cols=96 Identities=7% Similarity=0.001 Sum_probs=61.8
Q ss_pred HHHHHHhcCCCeEEEec-CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHh--cCCceEEEEC
Q 020275 165 RLQVLVESGPDLLAFET-IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINK--SGKVNAVGIN 241 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~~iGvN 241 (328)
-++...++|+|.+.+=+ .+..++++.+++.+++.+ +.+..++. +- ...+++..++.++. ..++..|.+.
T Consensus 98 ~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G--~~v~~~~~--~a----~~~~~e~~~~ia~~~~~~Ga~~i~l~ 169 (345)
T 1nvm_A 98 DLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLG--MDTVGFLM--MS----HMIPAEKLAEQGKLMESYGATCIYMA 169 (345)
T ss_dssp HHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHT--CEEEEEEE--ST----TSSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCC--CEEEEEEE--eC----CCCCHHHHHHHHHHHHHCCCCEEEEC
Confidence 35556678999986653 233467888888888886 55665553 21 23455544443322 1355555554
Q ss_pred CC----ChhhhHHHHHHHHhhc--CCeEEEEeC
Q 020275 242 CA----PPQFVENLICYFKELT--KKAIVVYPN 268 (328)
Q Consensus 242 C~----~p~~~~~~l~~l~~~~--~~pl~~ypN 268 (328)
=+ .|..+..+++.+++.. +.|+.+...
T Consensus 170 DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~H 202 (345)
T 1nvm_A 170 DSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAH 202 (345)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECB
T ss_pred CCcCccCHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 32 4999999999999888 678888654
No 84
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=87.12 E-value=0.72 Score=42.24 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=36.0
Q ss_pred HHHHHHHHhcCCCeEEEec-CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 163 RRRLQVLVESGPDLLAFET-IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
.++++++.++|+|.|++|. +|+.+|++.+.+.++ + .+|+++.
T Consensus 173 i~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~--~-~~P~i~~ 215 (295)
T 1s2w_A 173 LKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWN--N-QGPVVIV 215 (295)
T ss_dssp HHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHT--T-CSCEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcC--C-CCCEEEe
Confidence 6688999999999999998 899999999998875 2 4898755
No 85
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=87.07 E-value=14 Score=33.17 Aligned_cols=138 Identities=12% Similarity=-0.003 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhcCCC-eEEEec-----------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 161 FHRRRLQVLVESGPD-LLAFET-----------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD-~i~~ET-----------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
.|.+.++.+.+.|+| +|-+-- ..+.+.+..+++++++.- ++|+++-++.. + +-+.+.+.++.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~----~-~~~~~~~~a~~ 180 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPY----F-DLVHFDIMAEI 180 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC----C-SHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCC----C-CHHHHHHHHHH
Confidence 357778888889999 876632 126677778888888753 68999887532 1 11123333555
Q ss_pred HHhcCCceEEEECCC--------------------------Chh---hhHHHHHHHHhhc--CCeEEEEeCCCCccCCcc
Q 020275 229 INKSGKVNAVGINCA--------------------------PPQ---FVENLICYFKELT--KKAIVVYPNSGEVWDGRA 277 (328)
Q Consensus 229 ~~~~~~~~~iGvNC~--------------------------~p~---~~~~~l~~l~~~~--~~pl~~ypN~g~~~d~~~ 277 (328)
+.+ .++++|-+-.+ .+. .....++++++.. +.|+++ |+|.
T Consensus 181 ~~~-~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~--~GGI------ 251 (311)
T 1jub_A 181 LNQ-FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIG--TGGI------ 251 (311)
T ss_dssp HTT-SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEE--ESSC------
T ss_pred HHH-cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEE--ECCC------
Confidence 544 46776544322 110 1245667777776 567554 4442
Q ss_pred ccccCCCCCChhHHHHHHHHHHHcCCeEEeecCC---CChHHHHHHHHHHh
Q 020275 278 KKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCR---TTPSTIQAVSKVLK 325 (328)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCG---t~P~hI~al~~~l~ 325 (328)
.++++..+ .+..||..|+=+-+ -+|.-++.|.+.+.
T Consensus 252 --------~~~~da~~----~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l~ 290 (311)
T 1jub_A 252 --------ETGQDAFE----HLLCGATMLQIGTALHKEGPAIFDRIIKELE 290 (311)
T ss_dssp --------CSHHHHHH----HHHHTCSEEEECHHHHHHCTHHHHHHHHHHH
T ss_pred --------CCHHHHHH----HHHcCCCEEEEchHHHhcCcHHHHHHHHHHH
Confidence 13444444 33568877754433 36887777766553
No 86
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=86.60 E-value=13 Score=31.16 Aligned_cols=90 Identities=16% Similarity=0.106 Sum_probs=53.4
Q ss_pred HHHHHHHHhcCCCeEEEecCCC-HHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 163 RRRLQVLVESGPDLLAFETIPN-KLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~-~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
.+.++.+. .|+|+|-.-+ |. +.....+++.+|+...+.|+.+.+.+.+.. ...++.+.+ .++++|-+-
T Consensus 16 ~~~~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~--------~~~~~~~~~-~Gad~v~v~ 84 (211)
T 3f4w_A 16 MVFMDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGG--------HFESQLLFD-AGADYVTVL 84 (211)
T ss_dssp HHHHHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCH--------HHHHHHHHH-TTCSEEEEE
T ss_pred HHHHHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEEEEEeccch--------HHHHHHHHh-cCCCEEEEe
Confidence 34556664 6899986554 55 566667778888763368998777654321 222444433 467777776
Q ss_pred CCCh-hhhHHHHHHHHhhcCCeEE
Q 020275 242 CAPP-QFVENLICYFKELTKKAIV 264 (328)
Q Consensus 242 C~~p-~~~~~~l~~l~~~~~~pl~ 264 (328)
+..+ +.+..+++.+++. ...++
T Consensus 85 ~~~~~~~~~~~~~~~~~~-g~~~~ 107 (211)
T 3f4w_A 85 GVTDVLTIQSCIRAAKEA-GKQVV 107 (211)
T ss_dssp TTSCHHHHHHHHHHHHHH-TCEEE
T ss_pred CCCChhHHHHHHHHHHHc-CCeEE
Confidence 6543 4556666666654 33433
No 87
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=86.58 E-value=16 Score=34.15 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=39.1
Q ss_pred HHHHHHHHhcCCCeEEEe----c-----------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 163 RRRLQVLVESGPDLLAFE----T-----------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
.++++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++|++.+--+ .+..+++.
T Consensus 160 ~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~--~iPVIA~GGI---------~~~~di~k 228 (366)
T 4fo4_A 160 AEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY--GIPVIADGGI---------RFSGDISK 228 (366)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEESCC---------CSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhc--CCeEEEeCCC---------CCHHHHHH
Confidence 346677888999999982 1 24443444444444444 5898865422 13456666
Q ss_pred HHHhcCCceEEEEC
Q 020275 228 IINKSGKVNAVGIN 241 (328)
Q Consensus 228 ~~~~~~~~~~iGvN 241 (328)
.+.. ++++|++-
T Consensus 229 ala~--GAd~V~vG 240 (366)
T 4fo4_A 229 AIAA--GASCVMVG 240 (366)
T ss_dssp HHHT--TCSEEEES
T ss_pred HHHc--CCCEEEEC
Confidence 6653 56777665
No 88
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=86.53 E-value=0.59 Score=43.05 Aligned_cols=42 Identities=17% Similarity=0.222 Sum_probs=35.3
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
-++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+++.++
T Consensus 178 i~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~-----~~P~~~n~~ 219 (305)
T 3ih1_A 178 IERANAYVKAGADAIFPEALQSEEEFRLFNSKV-----NAPLLANMT 219 (305)
T ss_dssp HHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS-----CSCBEEECC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc-----CCCEEEeec
Confidence 568899999999999999999999998887765 378876553
No 89
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=86.48 E-value=21 Score=34.17 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHh
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEE 197 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~ 197 (328)
-+|..++++ |+|+|++|+. ++++|++.+++.++.
T Consensus 269 I~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~ 303 (433)
T 3eol_A 269 IARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHK 303 (433)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcc
Confidence 567788887 9999999996 899999999999985
No 90
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=86.43 E-value=11 Score=37.01 Aligned_cols=66 Identities=11% Similarity=0.154 Sum_probs=41.7
Q ss_pred HHHHHHHhcCCCeEEEe----c-----------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFE----T-----------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
+.++.+.++|+|+|.+- + .|.+..+..+.+++++. ++|++.+.-+ .+..+++..
T Consensus 309 e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GGI---------~~~~di~ka 377 (511)
T 3usb_A 309 EATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH--GIPVIADGGI---------KYSGDMVKA 377 (511)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT--TCCEEEESCC---------CSHHHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC--CCcEEEeCCC---------CCHHHHHHH
Confidence 35677888999999751 1 45555555566666654 4999976532 234566666
Q ss_pred HHhcCCceEEEECC
Q 020275 229 INKSGKVNAVGINC 242 (328)
Q Consensus 229 ~~~~~~~~~iGvNC 242 (328)
+. .+++++++-=
T Consensus 378 la--~GA~~V~vGs 389 (511)
T 3usb_A 378 LA--AGAHVVMLGS 389 (511)
T ss_dssp HH--TTCSEEEEST
T ss_pred HH--hCchhheecH
Confidence 64 3567777654
No 91
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=86.41 E-value=12 Score=32.46 Aligned_cols=97 Identities=13% Similarity=0.173 Sum_probs=54.4
Q ss_pred HHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEEEec--CC---CCCC-----CCCCHHHHHHHHHh
Q 020275 164 RRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICFSSV--DG---ENAP-----SGESFKECLDIINK 231 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~--~~---~~l~-----~G~~~~~~~~~~~~ 231 (328)
++++.+.+.|+|.+.+-+ +.+...+..+ .+..+ ...+.+++.+. ++ -.+. ++.+..+.+..+.+
T Consensus 87 ~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~---~~~~g-~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 162 (253)
T 1thf_D 87 ETASELILRGADKVSINTAAVENPSLITQI---AQTFG-SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 162 (253)
T ss_dssp HHHHHHHHTTCSEEEESHHHHHCTHHHHHH---HHHHC-GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHHhChHHHHHH---HHHcC-CCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH
Confidence 457777788999998765 3444334433 33333 12345566553 11 0111 12345566665654
Q ss_pred cCCceEEEECCCChhh-----hHHHHHHHHhhcCCeEEE
Q 020275 232 SGKVNAVGINCAPPQF-----VENLICYFKELTKKAIVV 265 (328)
Q Consensus 232 ~~~~~~iGvNC~~p~~-----~~~~l~~l~~~~~~pl~~ 265 (328)
.++..|.++...++. -...++++++..+.|+++
T Consensus 163 -~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia 200 (253)
T 1thf_D 163 -RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 200 (253)
T ss_dssp -TTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEE
T ss_pred -CCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEE
Confidence 467778877654322 256778887777778765
No 92
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=86.38 E-value=10 Score=33.97 Aligned_cols=92 Identities=14% Similarity=0.178 Sum_probs=55.5
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEe--cC----CCCCCCCCCHH---HHHHHHH--hcCC
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSS--VD----GENAPSGESFK---ECLDIIN--KSGK 234 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~--~~----~~~l~~G~~~~---~~~~~~~--~~~~ 234 (328)
+..|.++|++.+-+|-- .|....++++.+.+ .||+--+-+ .. ++...-|.+-+ ++++... +..+
T Consensus 100 a~rl~kaGa~aVklEgg---~e~~~~I~al~~ag--ipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAG 174 (264)
T 1m3u_A 100 AATVMRAGANMVKIEGG---EWLVETVQMLTERA--VPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAG 174 (264)
T ss_dssp HHHHHHTTCSEEECCCS---GGGHHHHHHHHHTT--CCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECCc---HHHHHHHHHHHHCC--CCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCC
Confidence 34556699999999976 35555666666664 898833332 22 13333455432 3332221 1247
Q ss_pred ceEEEECCCChhhhHHHHHHHHhhcCCeEEEE
Q 020275 235 VNAVGINCAPPQFVENLICYFKELTKKAIVVY 266 (328)
Q Consensus 235 ~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~y 266 (328)
.++|=+-|... .+.+++.+..+.|++..
T Consensus 175 A~~ivlE~vp~----~~a~~it~~l~iP~igI 202 (264)
T 1m3u_A 175 AQLLVLECVPV----ELAKRITEALAIPVIGI 202 (264)
T ss_dssp CCEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred CcEEEEecCCH----HHHHHHHHhCCCCEEEe
Confidence 89999999853 45566666677887653
No 93
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=86.31 E-value=8.3 Score=35.63 Aligned_cols=116 Identities=11% Similarity=0.096 Sum_probs=65.9
Q ss_pred HHHHhccceeecCCcCCChhhH-HhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeecCCcccCcC
Q 020275 62 EYLEAGADILVTSSYQATIPGF-LSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLA 140 (328)
Q Consensus 62 ~yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~ 140 (328)
.-+++|+|+|.... .+|.... ...+.+.++.-+.....++.|++. +.+ |.+++-.+..
T Consensus 104 ~a~~~g~~~v~i~~-~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~---------------G~~--v~~~~~~~~~--- 162 (337)
T 3ble_A 104 WIKDSGAKVLNLLT-KGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKS---------------GLK--INVYLEDWSN--- 162 (337)
T ss_dssp HHHHHTCCEEEEEE-ECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHT---------------TCE--EEEEEETHHH---
T ss_pred HHHHCCCCEEEEEE-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC---------------CCE--EEEEEEECCC---
Confidence 34678999887643 3454433 344777554444444444444431 223 4444321100
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-cC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCC
Q 020275 141 DGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-TI--PNKLEAQALVELLEEENIQIPSWICFSSVDG 213 (328)
Q Consensus 141 ~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~ 213 (328)
.+.+ + .+++.+.++.+.+.|+|.|.+- |+ -.+.++..+++.+++.-. .+-|+|.+=++
T Consensus 163 -----~~~~----~----~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p--~~~i~~H~Hnd 223 (337)
T 3ble_A 163 -----GFRN----S----PDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYP--DIHFEFHGHND 223 (337)
T ss_dssp -----HHHH----C----HHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCT--TSCEEEECBCT
T ss_pred -----CCcC----C----HHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcC--CCeEEEEecCC
Confidence 1111 2 2566788889999999999664 43 467899999998886521 34467766444
No 94
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=86.20 E-value=20 Score=32.85 Aligned_cols=84 Identities=14% Similarity=0.195 Sum_probs=47.7
Q ss_pred HHHHHHhcCCCeEEEe-cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCC--HHHHH-HHHHhcCCceEEEE
Q 020275 165 RLQVLVESGPDLLAFE-TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGES--FKECL-DIINKSGKVNAVGI 240 (328)
Q Consensus 165 qi~~l~~~gvD~i~~E-T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~--~~~~~-~~~~~~~~~~~iGv 240 (328)
.++.+.+.|+|.|-+. ++.++.+++. . .+.+.. +.-.++....|..|+. +.+.+ +.++. +...++.
T Consensus 254 ~l~~~~~~g~d~i~~d~~~~~~~~~k~---~---~g~~~~--l~Gnldp~~~l~~g~~e~i~~~v~~~l~~--~g~I~~~ 323 (348)
T 4ay7_A 254 ILSDMADCGFEGLSVEEKIGSAKKGKE---V---IGTRAR--LVGNVSSPFTLLPGPVDKIKAEAKEALEG--GIDVLAP 323 (348)
T ss_dssp HHHHHHTSCCSEEECCGGGCCHHHHHH---H---HTTSSE--EEEEECCCCCCTTCCHHHHHHHHHHHHHT--TCSEEEE
T ss_pred HHHHHHHhccccccccchhhHHHHHHH---H---hCCCEE--EEcCCCChHhhcCCCHHHHHHHHHHHHhC--CCCEEeC
Confidence 5667788999999876 5556655332 1 232233 3344554455666752 32223 23332 3356777
Q ss_pred CCC-----ChhhhHHHHHHHHhh
Q 020275 241 NCA-----PPQFVENLICYFKEL 258 (328)
Q Consensus 241 NC~-----~p~~~~~~l~~l~~~ 258 (328)
.|. .|+.+..+++..++.
T Consensus 324 Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 324 GCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp SSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHh
Confidence 785 357788888777653
No 95
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=86.00 E-value=15 Score=32.97 Aligned_cols=148 Identities=14% Similarity=0.177 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeE-----EEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLL-----AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i-----~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
+.+++ ..+++.+...|+|++ +++...+..++...+..+++.-.++|+++++-...+|--..+. -++.++.
T Consensus 50 ~~~e~----~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~-~~~~~~l 124 (276)
T 3o1n_A 50 TITDV----KSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALT-TGQYIDL 124 (276)
T ss_dssp SHHHH----HHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCC-HHHHHHH
T ss_pred CHHHH----HHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCC-HHHHHHH
Confidence 44554 445666666899987 4566666677777888887753369999999875554222332 2333333
Q ss_pred H---HhcCCceEEEECCCCh-hhhHHHHHHHHhhcCCeEEE-EeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC
Q 020275 229 I---NKSGKVNAVGINCAPP-QFVENLICYFKELTKKAIVV-YPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA 303 (328)
Q Consensus 229 ~---~~~~~~~~iGvNC~~p-~~~~~~l~~l~~~~~~pl~~-ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 303 (328)
+ .+...++.|=|-=..+ +.+..+++..++. ...+++ |=| | ....+.++|.+...+..+.|+
T Consensus 125 l~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~-~~kvI~S~Hd-----------f--~~tP~~~el~~~~~~~~~~Ga 190 (276)
T 3o1n_A 125 NRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH-NVAVIMSNHD-----------F--HKTPAAEEIVQRLRKMQELGA 190 (276)
T ss_dssp HHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT-TCEEEEEEEE-----------S--SCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC-CCEEEEEeec-----------C--CCCcCHHHHHHHHHHHHHcCC
Confidence 3 2222267777765543 4455555544433 334433 222 1 111135678888888888896
Q ss_pred ---eEEeecCCCChHHHHHHHH
Q 020275 304 ---KLIGGCCRTTPSTIQAVSK 322 (328)
Q Consensus 304 ---~iiGGCCGt~P~hI~al~~ 322 (328)
+|+. . -.++++.-.|-+
T Consensus 191 DIvKia~-~-a~s~~Dvl~Ll~ 210 (276)
T 3o1n_A 191 DIPKIAV-M-PQTKADVLTLLT 210 (276)
T ss_dssp SEEEEEE-C-CSSHHHHHHHHH
T ss_pred CEEEEEe-c-CCChHHHHHHHH
Confidence 5553 2 234455444433
No 96
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=85.87 E-value=18 Score=31.96 Aligned_cols=92 Identities=17% Similarity=0.228 Sum_probs=52.6
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCce-EEEEC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVN-AVGIN 241 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-~iGvN 241 (328)
..-++.+.++|+|.+++=.+| .+|....++.+++.+ +.++ .+.. ..++.+..........+.. .+.+.
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~g--l~~i-~l~~-------p~t~~~rl~~ia~~a~gfiy~vs~~ 180 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKYV--LSFV-PLGA-------PTSTRKRIKLICEAADEMTYFVSVT 180 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTT--CEEC-CEEC-------TTCCHHHHHHHHHHCSSCEEEESSC
T ss_pred HHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcC--CcEE-EEeC-------CCCCHHHHHHHHHhCCCCEEEEecC
Confidence 445667788999988875555 378888999999876 4432 2221 1133333333333222222 22222
Q ss_pred C-C-----Ch-hhhHHHHHHHHhhcCCeEEE
Q 020275 242 C-A-----PP-QFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 242 C-~-----~p-~~~~~~l~~l~~~~~~pl~~ 265 (328)
- + .+ ..+...++.+++.++.|+.+
T Consensus 181 g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (262)
T 2ekc_A 181 GTTGAREKLPYERIKKKVEEYRELCDKPVVV 211 (262)
T ss_dssp C---------CHHHHHHHHHHHHHCCSCEEE
T ss_pred CccCCCCCcCcccHHHHHHHHHhhcCCCEEE
Confidence 1 1 12 44667888998888888766
No 97
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=85.80 E-value=6.4 Score=37.78 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=29.9
Q ss_pred HHHHHHHHhcCCCeEEEec-CCCHHHHHHHHHHHHh
Q 020275 163 RRRLQVLVESGPDLLAFET-IPNKLEAQALVELLEE 197 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~~~~~ 197 (328)
-.|..++.+ |+|+|++|| .++++|++.+++.++.
T Consensus 270 I~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~ 304 (429)
T 1f8m_A 270 IARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA 304 (429)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc
Confidence 557788877 899999998 8999999999999974
No 98
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=85.09 E-value=20 Score=31.75 Aligned_cols=133 Identities=19% Similarity=0.164 Sum_probs=75.2
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeE-----EEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCC-CCCCCCCHHHHHH
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLL-----AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGE-NAPSGESFKECLD 227 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i-----~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~-~l~~G~~~~~~~~ 227 (328)
+.+++ ..+++.+...|+|++ +++.+++..++...+..+++.-.++|+++++-...+| +.+++.. ++.++
T Consensus 30 ~~~e~----~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~-~~~~~ 104 (257)
T 2yr1_A 30 DDRKV----LREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNE-AEVRR 104 (257)
T ss_dssp SHHHH----HHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCH-HHHHH
T ss_pred CHHHH----HHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCH-HHHHH
Confidence 45555 344555566788887 4577777777777777777653268999999765554 3324432 33333
Q ss_pred HH---HhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEE-EeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC
Q 020275 228 II---NKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVV-YPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA 303 (328)
Q Consensus 228 ~~---~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~-ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 303 (328)
.+ .....++.|=|--..++.+..+++..++. ...+++ |=| | ....+.+++.+...+..+.|+
T Consensus 105 ll~~~~~~g~~d~iDvEl~~~~~~~~l~~~~~~~-~~kvI~S~Hd-----------f--~~tP~~~el~~~~~~~~~~ga 170 (257)
T 2yr1_A 105 LIEAICRSGAIDLVDYELAYGERIADVRRMTEEC-SVWLVVSRHY-----------F--DGTPRKETLLADMRQAERYGA 170 (257)
T ss_dssp HHHHHHHHTCCSEEEEEGGGTTHHHHHHHHHHHT-TCEEEEEEEE-----------S--SCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCEEEEECCCChhHHHHHHHHHhC-CCEEEEEecC-----------C--CCCcCHHHHHHHHHHHHhcCC
Confidence 33 22222667666655444555555544443 223333 222 1 111124678888888888887
Q ss_pred eE
Q 020275 304 KL 305 (328)
Q Consensus 304 ~i 305 (328)
.|
T Consensus 171 Di 172 (257)
T 2yr1_A 171 DI 172 (257)
T ss_dssp SE
T ss_pred CE
Confidence 44
No 99
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=84.99 E-value=0.76 Score=41.99 Aligned_cols=43 Identities=23% Similarity=0.202 Sum_probs=35.6
Q ss_pred HHHHHHHHhcCCCeEEEec-CCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 163 RRRLQVLVESGPDLLAFET-IPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
.++++++.++|+|.|++|. +++.+|++.+.+.+. .+.|+++..
T Consensus 169 i~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~---~~vP~i~n~ 212 (290)
T 2hjp_A 169 VRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP---GKVPLVLVP 212 (290)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC---CSSCEEECG
T ss_pred HHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC---CCCCEEEec
Confidence 5688999999999999999 999999988887763 248877643
No 100
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=84.24 E-value=13 Score=36.10 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=41.4
Q ss_pred HHHHHHHhcCCCeEEEe----c-----------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFE----T-----------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
+.++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++|++.+--+ .+..+++..
T Consensus 282 e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GGI---------~~~~di~ka 350 (490)
T 4avf_A 282 EAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGT--GVPLIADGGI---------RFSGDLAKA 350 (490)
T ss_dssp HHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTT--TCCEEEESCC---------CSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccC--CCcEEEeCCC---------CCHHHHHHH
Confidence 35677889999999872 1 35555555556655544 5999865422 245677776
Q ss_pred HHhcCCceEEEECC
Q 020275 229 INKSGKVNAVGINC 242 (328)
Q Consensus 229 ~~~~~~~~~iGvNC 242 (328)
+.. +++++.+--
T Consensus 351 l~~--GAd~V~vGs 362 (490)
T 4avf_A 351 MVA--GAYCVMMGS 362 (490)
T ss_dssp HHH--TCSEEEECT
T ss_pred HHc--CCCeeeecH
Confidence 653 566766653
No 101
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=84.02 E-value=15 Score=32.15 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=52.6
Q ss_pred HHHHHHhcCCCeEEEecCCCHH--HHHHHHHHHHhcCC-CccEEEEEEec--CC---CCCCCC-----CCHHHHHHHHHh
Q 020275 165 RLQVLVESGPDLLAFETIPNKL--EAQALVELLEEENI-QIPSWICFSSV--DG---ENAPSG-----ESFKECLDIINK 231 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~--E~~a~~~~~~~~~~-~~pv~is~~~~--~~---~~l~~G-----~~~~~~~~~~~~ 231 (328)
+++.+.+.|+|.+++-+...-. +...+.+++++.+. .-++++++.+. ++ -.+..+ .+..+.+..+.+
T Consensus 88 ~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 167 (266)
T 2w6r_A 88 HFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEK 167 (266)
T ss_dssp HHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHH
Confidence 4555666899999988754311 33333343333320 12456676653 21 112122 356666665654
Q ss_pred cCCceEEEECCCChhh-----hHHHHHHHHhhcCCeEEE
Q 020275 232 SGKVNAVGINCAPPQF-----VENLICYFKELTKKAIVV 265 (328)
Q Consensus 232 ~~~~~~iGvNC~~p~~-----~~~~l~~l~~~~~~pl~~ 265 (328)
.++..|.++-...+. -...++++++..+.|+++
T Consensus 168 -~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia 205 (266)
T 2w6r_A 168 -RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 205 (266)
T ss_dssp -TTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEE
T ss_pred -cCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEE
Confidence 467777776432111 156778888877788766
No 102
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=83.76 E-value=3.8 Score=37.79 Aligned_cols=139 Identities=14% Similarity=0.078 Sum_probs=75.9
Q ss_pred CChHHHHHHHHHHHHhccceeecCCcCCChhhH-HhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 51 KQPHLVKRVHLEYLEAGADILVTSSYQATIPGF-LSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 51 ~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
.+++-++...+.-..+|++.|.+. ..+|.... ...+.+.++.-+....+++.|++. +.. |.
T Consensus 78 ~~~~~i~~a~~al~~ag~~~v~i~-~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~---------------g~~--v~ 139 (325)
T 3eeg_A 78 AKEADINIAGEALRFAKRSRIHTG-IGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV---------------VHE--VE 139 (325)
T ss_dssp SCHHHHHHHHHHHTTCSSEEEEEE-EECSHHHHC----CCCTTGGGTTHHHHHHHHTT---------------SSE--EE
T ss_pred CCHHHHHHHHHhhcccCCCEEEEE-ecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC---------------CCE--EE
Confidence 455566655444444588877754 22333332 223555544555555566665531 222 32
Q ss_pred eecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-c--CCCHHHHHHHHHHHHhcCCCcc-EE
Q 020275 130 ASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-T--IPNKLEAQALVELLEEENIQIP-SW 205 (328)
Q Consensus 130 GsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~~~~~~~~~~p-v~ 205 (328)
. |+ ||.+.+ +. +++.+.++.+.+.|+|.|.+- | +..+.++..+++.+++.-.+.| +.
T Consensus 140 f--~~---------~d~~~~----~~----~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~ 200 (325)
T 3eeg_A 140 F--FC---------EDAGRA----DQ----AFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAI 200 (325)
T ss_dssp E--EE---------ETGGGS----CH----HHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSE
T ss_pred E--Ec---------cccccc----hH----HHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceE
Confidence 2 11 222332 33 456777888888999998765 3 3467888889988886521212 77
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHH
Q 020275 206 ICFSSVDGENAPSGESFKECLDIIN 230 (328)
Q Consensus 206 is~~~~~~~~l~~G~~~~~~~~~~~ 230 (328)
|+|.+=++. |..+..++..+.
T Consensus 201 i~~H~Hnd~----GlA~AN~laA~~ 221 (325)
T 3eeg_A 201 LSAHCHNDL----GLATANSLAALQ 221 (325)
T ss_dssp EEECBCCTT----SCHHHHHHHHHH
T ss_pred EEEEeCCCC----CHHHHHHHHHHH
Confidence 888775543 455555554443
No 103
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=83.76 E-value=24 Score=31.65 Aligned_cols=29 Identities=24% Similarity=0.370 Sum_probs=25.2
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQA 78 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~a 78 (328)
..++|...++=+.--++|+|++..-+|..
T Consensus 48 ~~~~e~a~~~a~~~k~~ga~~~k~~~~kp 76 (276)
T 1vs1_A 48 VESWEQVREAALAVKEAGAHMLRGGAFKP 76 (276)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECBSSCC
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEeEEEeC
Confidence 57899999999999999999998877753
No 104
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=83.70 E-value=24 Score=31.67 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=53.6
Q ss_pred HHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCC------CCCCCCC--CHHHHHHHHH--hcCCce
Q 020275 167 QVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDG------ENAPSGE--SFKECLDIIN--KSGKVN 236 (328)
Q Consensus 167 ~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~------~~l~~G~--~~~~~~~~~~--~~~~~~ 236 (328)
..|.++|++.+-+|-- .|....++++.+.+ .||+--+-+... +...-|. ..+++++... +..+++
T Consensus 102 ~rl~kaGa~aVklEdg---~e~~~~I~al~~ag--IpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~ 176 (275)
T 1o66_A 102 AELMAAGAHMVKLEGG---VWMAETTEFLQMRG--IPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAA 176 (275)
T ss_dssp HHHHHTTCSEEEEECS---GGGHHHHHHHHHTT--CCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCcEEEECCc---HHHHHHHHHHHHcC--CCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCc
Confidence 3456699999999976 35555666676664 898854443221 1111222 2344443221 125889
Q ss_pred EEEECCCChhhhHHHHHHHHhhcCCeEEEE
Q 020275 237 AVGINCAPPQFVENLICYFKELTKKAIVVY 266 (328)
Q Consensus 237 ~iGvNC~~p~~~~~~l~~l~~~~~~pl~~y 266 (328)
+|=+-|... .+.+++.+..+.|++..
T Consensus 177 ~ivlE~vp~----~~a~~it~~l~iP~igI 202 (275)
T 1o66_A 177 VVLMECVLA----ELAKKVTETVSCPTIGI 202 (275)
T ss_dssp EEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred EEEEecCCH----HHHHHHHHhCCCCEEEE
Confidence 999999853 45566666677887653
No 105
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=83.64 E-value=17 Score=34.89 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhc
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEE 198 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~ 198 (328)
-+|..++.+ |+|+|++|+. ++++|++.+++.++..
T Consensus 274 I~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~ 309 (435)
T 3lg3_A 274 ISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQ 309 (435)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhccc
Confidence 567788887 9999999996 8999999999999863
No 106
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=83.42 E-value=16 Score=31.58 Aligned_cols=97 Identities=10% Similarity=0.024 Sum_probs=53.4
Q ss_pred HHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEEEecCC-----CCC-----CCCCCHHHHHHHHHh
Q 020275 164 RRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICFSSVDG-----ENA-----PSGESFKECLDIINK 231 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~-----~~l-----~~G~~~~~~~~~~~~ 231 (328)
++++.+.+.|+|.+++-+ +.+...+..+.+.+ + .-.+.+++++... -.+ .++.+..+.+..+.+
T Consensus 88 ~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---~-~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 163 (252)
T 1ka9_F 88 EDARKLLLSGADKVSVNSAAVRRPELIRELADHF---G-AQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH---C-GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc---C-CCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH
Confidence 467777778999999875 44444444444433 3 1234455555321 111 122345555555544
Q ss_pred cCCceEEEECCCChhh-----hHHHHHHHHhhcCCeEEE
Q 020275 232 SGKVNAVGINCAPPQF-----VENLICYFKELTKKAIVV 265 (328)
Q Consensus 232 ~~~~~~iGvNC~~p~~-----~~~~l~~l~~~~~~pl~~ 265 (328)
.++..|.++....+. -...++++++..+.|+++
T Consensus 164 -~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia 201 (252)
T 1ka9_F 164 -LGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIA 201 (252)
T ss_dssp -HTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEE
T ss_pred -cCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEE
Confidence 356677776432211 156778888877788765
No 107
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=83.21 E-value=18 Score=39.23 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=63.9
Q ss_pred HHHHHHHhcCCCeE-EEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCC----CCHHHH---HHHHHhcCCc
Q 020275 164 RRLQVLVESGPDLL-AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSG----ESFKEC---LDIINKSGKV 235 (328)
Q Consensus 164 ~qi~~l~~~gvD~i-~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G----~~~~~~---~~~~~~~~~~ 235 (328)
..++...++|+|.| +|-.+.++..++..++.+++.+ ..+-..+++.. ...|+ .+++-+ ++.+.+ .++
T Consensus 649 ~~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g--~~v~~~i~~~~--~~~d~~r~~~~~~~~~~~~~~~~~-~Ga 723 (1165)
T 2qf7_A 649 YFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEEN--KLCEAAICYTG--DILNSARPKYDLKYYTNLAVELEK-AGA 723 (1165)
T ss_dssp HHHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTT--CEEEEEEECCS--CTTCTTSGGGCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhcc--ceEEEEEEEec--cccCCCCCCCCHHHHHHHHHHHHH-cCC
Confidence 35666777899996 3456677788888889998876 43433333221 11122 344444 444433 466
Q ss_pred eEEEECC----CChhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 236 NAVGINC----APPQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 236 ~~iGvNC----~~p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
..|.+-= ..|..+..+++.+++..+.||.+...
T Consensus 724 ~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~H 760 (1165)
T 2qf7_A 724 HIIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTH 760 (1165)
T ss_dssp SEEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CEEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 7666542 34999999999998887778877654
No 108
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=83.20 E-value=8.5 Score=33.50 Aligned_cols=50 Identities=18% Similarity=0.177 Sum_probs=37.4
Q ss_pred HHHHHHHHhcCCCeEEE-----ecCCCHHHHHHHHHHHHhc-CCCccEEEEEEecC
Q 020275 163 RRRLQVLVESGPDLLAF-----ETIPNKLEAQALVELLEEE-NIQIPSWICFSSVD 212 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~-----ET~~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~ 212 (328)
.+.++.+.+.|+|++.+ -.+|++..-..+++.+|+. +.++|+-+-+.+.+
T Consensus 20 ~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~ 75 (228)
T 3ovp_A 20 GAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSK 75 (228)
T ss_dssp HHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSC
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCC
Confidence 56788888899999988 5567777666778888876 34688877776643
No 109
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=83.05 E-value=18 Score=36.35 Aligned_cols=135 Identities=15% Similarity=0.176 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEecCC-C-----------------HHHHHHHHHHHHhcCCCccEEEEEEecCCCC-
Q 020275 155 LEKLKDFHRRRLQVLVESGPDLLAFETIP-N-----------------KLEAQALVELLEEENIQIPSWICFSSVDGEN- 215 (328)
Q Consensus 155 ~~e~~~~h~~qi~~l~~~gvD~i~~ET~~-~-----------------~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~- 215 (328)
.+.+..||++++ +.|+.+|+-|... + +...+.+.+++++.+ .++++++.=. |+
T Consensus 36 ~~~~~~~y~~ra----~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~h~--Gr~ 107 (671)
T 1ps9_A 36 AERLAAFYAERA----RHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEG--GKIALQILHT--GRY 107 (671)
T ss_dssp HHHHHHHHHHHH----HTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTT--CCEEEEECCC--GGG
T ss_pred cHHHHHHHHHHh----cCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcC--CEEEEEeccC--Ccc
Confidence 477788888775 4789999998542 1 224556667777765 7888888521 11
Q ss_pred -------------------CCCCC----------CHHHHHHHHHhcCCceEEEECCCC---------h------------
Q 020275 216 -------------------APSGE----------SFKECLDIINKSGKVNAVGINCAP---------P------------ 245 (328)
Q Consensus 216 -------------------l~~G~----------~~~~~~~~~~~~~~~~~iGvNC~~---------p------------ 245 (328)
.+.-. .+.+++..+.+ .+.++|=|||.+ |
T Consensus 108 ~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~-aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs 186 (671)
T 1ps9_A 108 SYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLARE-AGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGD 186 (671)
T ss_dssp SBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSS
T ss_pred cCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHhCCCccCCCcCcCCCc
Confidence 00001 23344444443 588999999875 2
Q ss_pred -----hhhHHHHHHHHhhc--CCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEe
Q 020275 246 -----QFVENLICYFKELT--KKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIG 307 (328)
Q Consensus 246 -----~~~~~~l~~l~~~~--~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiG 307 (328)
..+...++.+++.. +.|+++.-+... |.. ...+.+++.++++.+.+.|+.+|.
T Consensus 187 ~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~--------~~~-~g~~~~~~~~~a~~l~~~g~d~i~ 246 (671)
T 1ps9_A 187 YRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD--------LVE-DGGTFAETVELAQAIEAAGATIIN 246 (671)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC--------CST-TCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCceEEEEECccc--------cCC-CCCCHHHHHHHHHHHHhcCCCEEE
Confidence 12455556666665 568877555321 111 123566788888888888887763
No 110
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=83.01 E-value=15 Score=34.07 Aligned_cols=80 Identities=11% Similarity=0.110 Sum_probs=52.6
Q ss_pred CccEEEEEEecCCCCCCCCCCHHHHH---HHHHhcCCce-EEEECCCC------------hhhhHHHHHHHHhhcCCeEE
Q 020275 201 QIPSWICFSSVDGENAPSGESFKECL---DIINKSGKVN-AVGINCAP------------PQFVENLICYFKELTKKAIV 264 (328)
Q Consensus 201 ~~pv~is~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~-~iGvNC~~------------p~~~~~~l~~l~~~~~~pl~ 264 (328)
+.|+++++. |.+.++.+ +.+.+ .+.+ +|=|||+. |+.+..+++.+++..++|+.
T Consensus 128 ~~pvivsI~---------g~~~~d~~~~a~~l~~-~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~ 197 (345)
T 3oix_A 128 SKNHFLSLV---------GMSPEETHTILXMVEA-SKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLG 197 (345)
T ss_dssp CCCCEEEEC---------CSSHHHHHHHHHHHHH-SSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEE
T ss_pred CCCEEEEec---------CCCHHHHHHHHHHHhc-cCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeE
Confidence 689999984 55555544 44433 2444 88888863 45677788888887788988
Q ss_pred EEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 265 VYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 265 ~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
++--. . ++..++++.+......|+.+
T Consensus 198 vKi~p-------------~--~~~~~~a~~~~~aga~~i~~ 223 (345)
T 3oix_A 198 IKLPP-------------Y--FDIVHFDQAAAIFNXYPLTF 223 (345)
T ss_dssp EEECC-------------C--CCHHHHHHHHHHHTTSCCSE
T ss_pred EEECC-------------C--CCHHHHHHHHHHhCCCceEE
Confidence 85431 1 24667777777766666643
No 111
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=82.84 E-value=28 Score=32.09 Aligned_cols=151 Identities=13% Similarity=0.108 Sum_probs=87.4
Q ss_pred CCCHHHH---HHHHHHHHHHHHhcCCCeEEEecC----------C-----------CH-HH---HHHHHHHHHhc-CCCc
Q 020275 152 GVDLEKL---KDFHRRRLQVLVESGPDLLAFETI----------P-----------NK-LE---AQALVELLEEE-NIQI 202 (328)
Q Consensus 152 ~~~~~e~---~~~h~~qi~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~~~~~~-~~~~ 202 (328)
.++.+|+ .+.|.+.++...++|.|.|=+--- | ++ .. +..+++++++. +.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4666555 455666677777899998743221 1 11 12 34456666653 5578
Q ss_pred cEEEEEEecCCCCCCCCCCHHHHHHHHHh--cCCceEEEECCC----------ChhhhHHHHHHHHhhcCCeEEEEeCCC
Q 020275 203 PSWICFSSVDGENAPSGESFKECLDIINK--SGKVNAVGINCA----------PPQFVENLICYFKELTKKAIVVYPNSG 270 (328)
Q Consensus 203 pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~~iGvNC~----------~p~~~~~~l~~l~~~~~~pl~~ypN~g 270 (328)
|+.+-++..+. ...|.++++++..++. ..+++.|-+-+. .|..-..+++.+++..+.|+++ |+|
T Consensus 221 pV~vRls~~~~--~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~Gg 296 (349)
T 3hgj_A 221 PLFVRVSATDW--GEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA--VGL 296 (349)
T ss_dssp CEEEEEESCCC--STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE--CSS
T ss_pred eEEEEeccccc--cCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE--ECC
Confidence 99999987543 3467777776654422 247888777641 1334456778888877788765 332
Q ss_pred CccCCccccccCCCCCChhHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHHHHH
Q 020275 271 EVWDGRAKKWLPSKCLGDGKFESFATRWRDSG-AKLIGGCCR--TTPSTIQAVSKVL 324 (328)
Q Consensus 271 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~iiGGCCG--t~P~hI~al~~~l 324 (328)
. .++++ +.+.++.| +.+|+=+=. .+|+-.+.+++.+
T Consensus 297 i--------------~t~e~----a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l 335 (349)
T 3hgj_A 297 I--------------TTPEQ----AETLLQAGSADLVLLGRVLLRDPYFPLRAAKAL 335 (349)
T ss_dssp C--------------CCHHH----HHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHT
T ss_pred C--------------CCHHH----HHHHHHCCCceEEEecHHHHhCchHHHHHHHHC
Confidence 1 12322 33455666 666653322 2566666666554
No 112
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=82.73 E-value=30 Score=32.15 Aligned_cols=52 Identities=25% Similarity=0.380 Sum_probs=34.9
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCC--ChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQA--TIPGFLSRGLSIEEAESLLEKSVTLAVEARDKF 111 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~a--s~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~ 111 (328)
+.+++...++=+.--++|||++..-+|.. ++..++ |+. ....++.+++++++
T Consensus 116 ~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~--glg--------~egl~~l~~~~~e~ 169 (350)
T 1vr6_A 116 VEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQ--GLG--------EKGLEYLREAADKY 169 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCC--CCT--------HHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhc--CCC--------HHHHHHHHHHHHHc
Confidence 46789999999999999999998877753 433321 333 24455556665553
No 113
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=82.66 E-value=2.3 Score=38.45 Aligned_cols=117 Identities=18% Similarity=0.164 Sum_probs=66.7
Q ss_pred CChHHHHHHHHHHHHhccceee--cCCcCCChhhHHhCC-CCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceE
Q 020275 51 KQPHLVKRVHLEYLEAGADILV--TSSYQATIPGFLSRG-LSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRAL 127 (328)
Q Consensus 51 ~~Pe~V~~iH~~yl~AGAdiI~--TnTy~as~~~l~~~g-~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~ 127 (328)
.+|+.+.+.-+.|+++||.-|. =-++.. ... ++.++..+-++ .++++++.. +.+.+
T Consensus 89 ~~~~~~~~~v~~l~~aGaagv~iED~~~~~------~k~l~~~~e~~~~I~----aa~~a~~~~-----------g~~~~ 147 (275)
T 2ze3_A 89 HAPEDVRRTVEHFAALGVAGVNLEDATGLT------PTELYDLDSQLRRIE----AARAAIDAS-----------GVPVF 147 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSS------SSCBCCHHHHHHHHH----HHHHHHHHH-----------TSCCE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCcCCC------CCccCCHHHHHHHHH----HHHHhHhhc-----------CCCeE
Confidence 3677788888889999988543 333310 111 24333333333 334443321 23455
Q ss_pred EEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 128 VAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 128 VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
|-|=---+.. + .+. ..++-.+.-.++++++.++|+|.|++|.+|+.+|++.+.+.+ +.|+-
T Consensus 148 i~aRtda~~~---------~-~g~--~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~n 208 (275)
T 2ze3_A 148 LNARTDTFLK---------G-HGA--TDEERLAETVRRGQAYADAGADGIFVPLALQSQDIRALADAL-----RVPLN 208 (275)
T ss_dssp EEEECCTTTT---------T-CSS--SHHHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHC-----SSCEE
T ss_pred EEEechhhhc---------c-ccc--cchhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence 6653322110 0 000 011222334568899999999999999999999999888765 37763
No 114
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=82.39 E-value=12 Score=33.95 Aligned_cols=119 Identities=13% Similarity=0.172 Sum_probs=63.8
Q ss_pred ceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCC---------CHHHHHHHH---
Q 020275 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIP---------NKLEAQALV--- 192 (328)
Q Consensus 125 ~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~---------~~~E~~a~~--- 192 (328)
+.+|-|-+--+.+++.||..| .+.+++ ..+++.+++.|+|+|=+-.-+ ..+|++-++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~-------~~~~~a----~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY-------NEVDAA----VRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH-------HHHHHH----HHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCcc-------CCHHHH----HHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 467888887777777665332 133333 456777788999998665322 267776666
Q ss_pred HHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhh-hHHHHHHHHhhcCCeEEEEeCCCC
Q 020275 193 ELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQF-VENLICYFKELTKKAIVVYPNSGE 271 (328)
Q Consensus 193 ~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~-~~~~l~~l~~~~~~pl~~ypN~g~ 271 (328)
+++++.- ++|+ |+. ....+.+-+.++. +..- ||=++... ...+++.+.+ .+.|+++.++.|.
T Consensus 108 ~~l~~~~-~vpi--SID---------T~~~~V~~aAl~a--Ga~i--INdvsg~~~d~~m~~~aa~-~g~~vVlmh~~G~ 170 (297)
T 1tx2_A 108 QAVSKEV-KLPI--SID---------TYKAEVAKQAIEA--GAHI--INDIWGAKAEPKIAEVAAH-YDVPIILMHNRDN 170 (297)
T ss_dssp HHHHHHS-CSCE--EEE---------CSCHHHHHHHHHH--TCCE--EEETTTTSSCTHHHHHHHH-HTCCEEEECCCSC
T ss_pred HHHHhcC-CceE--EEe---------CCCHHHHHHHHHc--CCCE--EEECCCCCCCHHHHHHHHH-hCCcEEEEeCCCC
Confidence 5555431 3554 552 2233333333433 2222 45543211 2233333333 3678888888663
No 115
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=82.26 E-value=28 Score=31.26 Aligned_cols=109 Identities=15% Similarity=0.123 Sum_probs=64.3
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|+|-|..+==..-.. -++.+|-.++.+.+++.+. ++-..|+|.
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~-----------------gr~pviaGv 77 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGESA-----TLNHDEHADVVMMTLDLAD-----------------GRIPVIAGT 77 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSCEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchh-----hCCHHHHHHHHHHHHHHhC-----------------CCCcEEEec
Confidence 456788888888999999765432111111 2455666677666665442 223456664
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 78 -g~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiil 132 (292)
T 2ojp_A 78 -GAN------------------ATAEA----ISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT-DLPQIL 132 (292)
T ss_dssp -CCS------------------SHHHH----HHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC-SSCEEE
T ss_pred -CCc------------------cHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 331 22222 3456666778999887654 246666666666655543 689884
No 116
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=82.20 E-value=15 Score=30.82 Aligned_cols=90 Identities=11% Similarity=0.181 Sum_probs=56.7
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP 244 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~ 244 (328)
.++.+.+.|+|.+.+=..+....+..+++.+++.+ .++.+.+.. -.+..+.+..+.+ .+++.|.+|-..
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~~~v~~~~--------~~t~~~~~~~~~~-~g~d~i~v~~g~ 137 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQVVVDMIC--------VDDLPARVRLLEE-AGADMLAVHTGT 137 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECTT--------CSSHHHHHHHHHH-HTCCEEEEECCH
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--CeEEEEecC--------CCCHHHHHHHHHH-cCCCEEEEcCCC
Confidence 47788889999999988877666788888888875 677664321 1233344444443 256777776321
Q ss_pred -----hhhhHHHHHHHHhhc-CCeEEE
Q 020275 245 -----PQFVENLICYFKELT-KKAIVV 265 (328)
Q Consensus 245 -----p~~~~~~l~~l~~~~-~~pl~~ 265 (328)
+......++++++.. +.|+.+
T Consensus 138 ~g~~~~~~~~~~i~~l~~~~~~~~i~~ 164 (211)
T 3f4w_A 138 DQQAAGRKPIDDLITMLKVRRKARIAV 164 (211)
T ss_dssp HHHHTTCCSHHHHHHHHHHCSSCEEEE
T ss_pred cccccCCCCHHHHHHHHHHcCCCcEEE
Confidence 111346677777664 556654
No 117
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=81.87 E-value=1.3 Score=40.44 Aligned_cols=38 Identities=24% Similarity=0.310 Sum_probs=32.7
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
.++++++.++|+|.|++|.+++.++++.+.+.+ +.|++
T Consensus 171 i~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~i 208 (287)
T 3b8i_A 171 IQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL-----HIPLM 208 (287)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC-----CSCEE
T ss_pred HHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC-----CCCEE
Confidence 568899999999999999999999988877654 48887
No 118
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=81.60 E-value=23 Score=33.16 Aligned_cols=77 Identities=6% Similarity=-0.077 Sum_probs=45.9
Q ss_pred HHHHHHHHhcCCceEEEECCCC---------hh-----------------hhHHHHHHHHhhcC-CeEEEEeCCCCccCC
Q 020275 223 KECLDIINKSGKVNAVGINCAP---------PQ-----------------FVENLICYFKELTK-KAIVVYPNSGEVWDG 275 (328)
Q Consensus 223 ~~~~~~~~~~~~~~~iGvNC~~---------p~-----------------~~~~~l~~l~~~~~-~pl~~ypN~g~~~d~ 275 (328)
.+++..+.+ .+.++|=|||.+ |. .+..+++.+++..+ .|+++.-+.+..+.+
T Consensus 170 ~~AA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g 248 (376)
T 1icp_A 170 RVAARNAIE-AGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNE 248 (376)
T ss_dssp HHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTT
T ss_pred HHHHHHHHH-cCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCC
Confidence 344444444 589999999975 21 14455666666654 389988875432211
Q ss_pred ccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 276 RAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
+ . ...+.+++.++++.+.+.|+.+|
T Consensus 249 ----~-~-~~~~~~~~~~la~~le~~Gvd~i 273 (376)
T 1icp_A 249 ----A-G-DTNPTALGLYMVESLNKYDLAYC 273 (376)
T ss_dssp ----C-C-CSCHHHHHHHHHHHHGGGCCSEE
T ss_pred ----C-C-CCCCHHHHHHHHHHHHHcCCCEE
Confidence 0 0 01234567888888888887554
No 119
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=81.48 E-value=2.9 Score=36.61 Aligned_cols=97 Identities=10% Similarity=0.095 Sum_probs=19.6
Q ss_pred HHHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCC-----CCCC-----CCCCHHHHHHHHHh
Q 020275 164 RRLQVLVESGPDLLAFETI--PNKLEAQALVELLEEENIQIPSWICFSSVDG-----ENAP-----SGESFKECLDIINK 231 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~-----~~l~-----~G~~~~~~~~~~~~ 231 (328)
++++.+.+.|+|.+.+-|- .++..+ .++.+..+ .-.+++++.+... -.+. ++.+..+.+..+.+
T Consensus 92 ~~~~~~l~~Gad~V~ig~~~l~dp~~~---~~~~~~~g-~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~ 167 (247)
T 3tdn_A 92 EHFLEAFLRGADKVSINTAAVENPSLI---TQIAQTFG-SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 167 (247)
T ss_dssp HHHHHHHHTTCSEECCSHHHHHCTHHH---HHHHHHHC------------------------------------------
T ss_pred HHHHHHHHcCCCeeehhhHHhhChHHH---HHHHHHhC-CCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHh
Confidence 4566667789999998763 333333 33444443 2345556665431 1111 22333444444443
Q ss_pred cCCceEEEECCCChhh-----hHHHHHHHHhhcCCeEEE
Q 020275 232 SGKVNAVGINCAPPQF-----VENLICYFKELTKKAIVV 265 (328)
Q Consensus 232 ~~~~~~iGvNC~~p~~-----~~~~l~~l~~~~~~pl~~ 265 (328)
.++..|.++....+. -..+++++++..+.|+++
T Consensus 168 -~G~~~i~~t~~~~~g~~~g~~~~~~~~i~~~~~iPvia 205 (247)
T 3tdn_A 168 -RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 205 (247)
T ss_dssp ---------------------------------------
T ss_pred -cCCCEEEEecccCCCCcCCCCHHHHHHHHHhCCCCEEE
Confidence 466677766653321 124556666655666543
No 120
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=81.41 E-value=23 Score=30.90 Aligned_cols=126 Identities=9% Similarity=0.100 Sum_probs=68.7
Q ss_pred HHHHHHHhcCCCeE-----EEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHh---cCCc
Q 020275 164 RRLQVLVESGPDLL-----AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINK---SGKV 235 (328)
Q Consensus 164 ~qi~~l~~~gvD~i-----~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~---~~~~ 235 (328)
.+++.+...|+|++ +++.. +..++...+..+++...++|+++++-...+|--.++. -++-++.+.. ..++
T Consensus 21 ~~~~~~~~~~~D~vElRvD~l~~~-~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~-~~~~~~ll~~~~~~~~~ 98 (238)
T 1sfl_A 21 IQKINHRIDAIDVLELRIDQFENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFT-NDSYLNLISDLANINGI 98 (238)
T ss_dssp HHHHHHTTTTCSEEEEECTTSTTC-CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCC-HHHHHHHHHHGGGCTTC
T ss_pred HHHHHhhhcCCCEEEEEecccccC-CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCC-HHHHHHHHHHHHHhCCC
Confidence 44555666788876 33443 5667777777777643368999999866554333443 2344443322 2257
Q ss_pred eEEEECCCC--h-hhhHHHHHHHHhhcCCeEEE-EeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 236 NAVGINCAP--P-QFVENLICYFKELTKKAIVV-YPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 236 ~~iGvNC~~--p-~~~~~~l~~l~~~~~~pl~~-ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
+.|=|--.. + +.+..+++..++. ...+++ |=| | ....+.+++.+...+..+.|+.|
T Consensus 99 d~iDvEl~~~~~~~~~~~l~~~~~~~-~~kvI~S~Hd-----------f--~~tp~~~el~~~~~~~~~~gaDi 158 (238)
T 1sfl_A 99 DMIDIEWQADIDIEKHQRIITHLQQY-NKEVIISHHN-----------F--ESTPPLDELQFIFFKMQKFNPEY 158 (238)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHT-TCEEEEEEEE-----------S--SCCCCHHHHHHHHHHHHTTCCSE
T ss_pred CEEEEEccCCCChHHHHHHHHHHHhc-CCEEEEEecC-----------C--CCCcCHHHHHHHHHHHHHcCCCE
Confidence 777776654 4 3455555555443 223333 222 1 11112467888888888888744
No 121
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=81.30 E-value=41 Score=33.20 Aligned_cols=65 Identities=12% Similarity=0.141 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEe-c--CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 160 DFHRRRLQVLVESGPDLLAFE-T--IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 160 ~~h~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
+++.+.++.+.+.|+|.|.+- | +..+.++..+++++++.- +..+.|++.+=++. |..+..++..+
T Consensus 175 e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~-p~~i~I~~H~Hnd~----GlAvAN~laAv 242 (539)
T 1rqb_A 175 EGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTY-GQKTQINLHCHSTT----GVTEVSLMKAI 242 (539)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHH-CTTCCEEEEEBCTT----SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhc-CCCceEEEEeCCCC----ChHHHHHHHHH
Confidence 567888899999999998664 4 456789999999988641 11355677765442 44444444433
No 122
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=81.18 E-value=41 Score=32.50 Aligned_cols=64 Identities=22% Similarity=0.229 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhcCCCeEEEe-c--CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHH
Q 020275 160 DFHRRRLQVLVESGPDLLAFE-T--IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIIN 230 (328)
Q Consensus 160 ~~h~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 230 (328)
+++.+.++.+.+.|+|.|.+- | +..+.++..+++++++.- ++| |++.+=++ .|..+..++..+.
T Consensus 158 e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~-~~~--i~~H~Hnd----~GlAvAN~laAv~ 224 (464)
T 2nx9_A 158 QTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-DVE--LHLHCHST----AGLADMTLLKAIE 224 (464)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC-CSC--EEEEECCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc-CCe--EEEEECCC----CChHHHHHHHHHH
Confidence 567888899999999998664 4 346889999999998753 344 56666443 3555555555443
No 123
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=80.40 E-value=36 Score=31.44 Aligned_cols=133 Identities=11% Similarity=0.003 Sum_probs=78.4
Q ss_pred HHHHHHHHHhcCCC-eEEEecC-----------CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 162 HRRRLQVLVESGPD-LLAFETI-----------PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 162 h~~qi~~l~~~gvD-~i~~ET~-----------~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
|.+-++.+.+.++| .|-+.-- .+.+.+..+++++++.- ++|+++-++.. .+..+.++.+
T Consensus 143 ~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p~--------~~~~~~a~~~ 213 (345)
T 3oix_A 143 THTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGIKLPPY--------FDIVHFDQAA 213 (345)
T ss_dssp HHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC--------CCHHHHHHHH
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEEEECCC--------CCHHHHHHHH
Confidence 45556666667776 7765521 35677888888888764 69999998742 3556666555
Q ss_pred Hhc--CCceEEEECCCC--------------------------hh---hhHHHHHHHHhhc--CCeEEEEeCCCCccCCc
Q 020275 230 NKS--GKVNAVGINCAP--------------------------PQ---FVENLICYFKELT--KKAIVVYPNSGEVWDGR 276 (328)
Q Consensus 230 ~~~--~~~~~iGvNC~~--------------------------p~---~~~~~l~~l~~~~--~~pl~~ypN~g~~~d~~ 276 (328)
... .+++ ++|++. |. .....+.++++.. +.|++. |+|.
T Consensus 214 ~~aga~~i~--~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg--~GGI----- 284 (345)
T 3oix_A 214 AIFNXYPLT--FVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIG--TGGV----- 284 (345)
T ss_dssp HHHTTSCCS--EEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEE--ESSC-----
T ss_pred HHhCCCceE--EEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEE--ECCC-----
Confidence 432 2333 333330 11 1145677777776 456554 4442
Q ss_pred cccccCCCCCChhHHHHHHHHHHHcCCeEEeecCC---CChHHHHHHHHHHh
Q 020275 277 AKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCR---TTPSTIQAVSKVLK 325 (328)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCG---t~P~hI~al~~~l~ 325 (328)
.++++..+ .+..||..|.=+-+ .+|..++.|.+.+.
T Consensus 285 ---------~s~~da~~----~l~aGAd~V~igra~~~~gP~~~~~i~~~L~ 323 (345)
T 3oix_A 285 ---------XTGRDAFE----HILCGASMVQIGTALHQEGPQIFKRITKELX 323 (345)
T ss_dssp ---------CSHHHHHH----HHHHTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred ---------CChHHHHH----HHHhCCCEEEEChHHHhcChHHHHHHHHHHH
Confidence 13433333 44578888776555 37888888777664
No 124
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=80.25 E-value=32 Score=30.65 Aligned_cols=92 Identities=15% Similarity=0.207 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEE-EEC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAV-GIN 241 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i-GvN 241 (328)
..-++.+.++|+|.+++=.+|. +|....++++++.+ ++.+ .+. .+.++.+.+........+...+ .+.
T Consensus 109 ~~f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~g--l~~i-~li-------ap~s~~eri~~ia~~~~gfiy~vs~~ 177 (271)
T 1ujp_A 109 ERFFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIG--LETV-FLL-------APTSTDARIATVVRHATGFVYAVSVT 177 (271)
T ss_dssp HHHHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHT--CEEE-CEE-------CTTCCHHHHHHHHTTCCSCEEEECC-
T ss_pred HHHHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcC--CceE-EEe-------CCCCCHHHHHHHHHhCCCCEEEEecC
Confidence 4456677789999887666654 77888888888876 4432 221 1224444333333333333322 111
Q ss_pred C-C-----ChhhhHHHHHHHHhhcCCeEEE
Q 020275 242 C-A-----PPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 242 C-~-----~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
- + .+.....+++++++.++.|+++
T Consensus 178 G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~v 207 (271)
T 1ujp_A 178 GVTGMRERLPEEVKDLVRRIKARTALPVAV 207 (271)
T ss_dssp -----------CCHHHHHHHHTTCCSCEEE
T ss_pred cccCCCCCCCccHHHHHHHHHhhcCCCEEE
Confidence 1 1 1334567888888877778765
No 125
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=79.87 E-value=15 Score=32.95 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=62.3
Q ss_pred HHHHHHHHHHhcC-CCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEE
Q 020275 161 FHRRRLQVLVESG-PDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVG 239 (328)
Q Consensus 161 ~h~~qi~~l~~~g-vD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iG 239 (328)
.|.+.++..++.| +|+|=+|-...-...+.+++.+++. +.++++|..-. ..+++-+.+.+.+..+.+ .+++.+=
T Consensus 120 ~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf--~~tP~~~el~~~~~~~~~-~GaDIvK 194 (276)
T 3o1n_A 120 QYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDF--HKTPAAEEIVQRLRKMQE-LGADIPK 194 (276)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEES--SCCCCHHHHHHHHHHHHH-TTCSEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecC--CCCcCHHHHHHHHHHHHH-cCCCEEE
Confidence 3455555666677 9999999876666666677766655 48999999732 222332223333333333 4556655
Q ss_pred ECCC--ChhhhHHHHHHHHh---h-cCCeEEEEeCC
Q 020275 240 INCA--PPQFVENLICYFKE---L-TKKAIVVYPNS 269 (328)
Q Consensus 240 vNC~--~p~~~~~~l~~l~~---~-~~~pl~~ypN~ 269 (328)
+-+. +++....+++.... . .+.|++++.=+
T Consensus 195 ia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 230 (276)
T 3o1n_A 195 IAVMPQTKADVLTLLTATVEMQERYADRPIITMSMS 230 (276)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECS
T ss_pred EEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 5554 46666666654332 2 46799887654
No 126
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=79.50 E-value=14 Score=33.07 Aligned_cols=84 Identities=8% Similarity=0.126 Sum_probs=54.1
Q ss_pred HHHHHHhcCCCeEEE--ecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 165 RLQVLVESGPDLLAF--ETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 165 qi~~l~~~gvD~i~~--ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
|++.....|+|.+++ .+++ ..+++.+++.+++.+ +.+|++++ +.+++...+. .+++.||+|-
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~lG--l~~lvev~-----------t~ee~~~A~~--~Gad~IGv~~ 190 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTESLG--MTALVEVH-----------TEQEADRALK--AGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHHTT--CEEEEEES-----------SHHHHHHHHH--HTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHHCC--CcEEEEcC-----------CHHHHHHHHH--CCCCEEEECC
Confidence 666666799999987 4454 567888888888775 88887762 4566555443 3688999995
Q ss_pred CC----hhhhHHHHHHHHhhc--CCeEEE
Q 020275 243 AP----PQFVENLICYFKELT--KKAIVV 265 (328)
Q Consensus 243 ~~----p~~~~~~l~~l~~~~--~~pl~~ 265 (328)
.. +.. ...++++.+.. +.|+++
T Consensus 191 r~l~~~~~d-l~~~~~l~~~v~~~~pvVa 218 (272)
T 3qja_A 191 RDLMTLDVD-RDCFARIAPGLPSSVIRIA 218 (272)
T ss_dssp BCTTTCCBC-TTHHHHHGGGSCTTSEEEE
T ss_pred CcccccccC-HHHHHHHHHhCcccCEEEE
Confidence 32 111 23445555544 345554
No 127
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=79.22 E-value=27 Score=31.36 Aligned_cols=96 Identities=10% Similarity=0.073 Sum_probs=59.8
Q ss_pred HHHHHHhcCCCeEEEecCCC-H--------------HHHHHHHHHHHhcCCCccEEEEEE----ecCCCCCCCCCCHHHH
Q 020275 165 RLQVLVESGPDLLAFETIPN-K--------------LEAQALVELLEEENIQIPSWICFS----SVDGENAPSGESFKEC 225 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~-~--------------~E~~a~~~~~~~~~~~~pv~is~~----~~~~~~l~~G~~~~~~ 225 (328)
-++...++|+|.+-+=.-.+ . +.++.+++.+++.+ +++.+.+. +.+.++ .+++.+
T Consensus 85 ~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G--~~v~~~l~~~~~~~~~~~----~~~~~~ 158 (298)
T 2cw6_A 85 GFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSAN--ISVRGYVSCALGCPYEGK----ISPAKV 158 (298)
T ss_dssp HHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTT--CEEEEEEETTTCBTTTBS----CCHHHH
T ss_pred hHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCCC----CCHHHH
Confidence 46777789999986643322 1 35566678888776 66655443 333333 344444
Q ss_pred H---HHHHhcCCceEEEEC----CCChhhhHHHHHHHHhhcC-CeEEEEe
Q 020275 226 L---DIINKSGKVNAVGIN----CAPPQFVENLICYFKELTK-KAIVVYP 267 (328)
Q Consensus 226 ~---~~~~~~~~~~~iGvN----C~~p~~~~~~l~~l~~~~~-~pl~~yp 267 (328)
+ +.+.+ .++..|.+. ...|..+..+++.+++..+ .|+.+..
T Consensus 159 ~~~~~~~~~-~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~ 207 (298)
T 2cw6_A 159 AEVTKKFYS-MGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHC 207 (298)
T ss_dssp HHHHHHHHH-TTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEE
T ss_pred HHHHHHHHH-cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 4 43443 466666554 3359999999999988764 5777765
No 128
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=78.97 E-value=28 Score=29.22 Aligned_cols=80 Identities=14% Similarity=0.160 Sum_probs=48.6
Q ss_pred HHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC
Q 020275 164 RRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA 243 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~ 243 (328)
++++.+.+.|+|.+.+... + ..+++..++.+ .++++. + .++.++..... .+++.|+++-+
T Consensus 71 ~~i~~a~~~Gad~V~~~~~-~----~~~~~~~~~~g--~~~~~g--~---------~t~~e~~~a~~--~G~d~v~v~~t 130 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPNI-H----SEVIRRAVGYG--MTVCPG--C---------ATATEAFTALE--AGAQALKIFPS 130 (212)
T ss_dssp HHHHHHHHTTCCEEECSSC-C----HHHHHHHHHTT--CEEECE--E---------CSHHHHHHHHH--TTCSEEEETTH
T ss_pred HHHHHHHHcCCCEEEeCCC-C----HHHHHHHHHcC--CCEEee--c---------CCHHHHHHHHH--CCCCEEEEecC
Confidence 3688888899999986653 2 22446666664 666665 2 24666665543 47899998543
Q ss_pred ChhhhHHHHHHHHhhcC--CeEE
Q 020275 244 PPQFVENLICYFKELTK--KAIV 264 (328)
Q Consensus 244 ~p~~~~~~l~~l~~~~~--~pl~ 264 (328)
.+ .-...++++.+..+ .|++
T Consensus 131 ~~-~g~~~~~~l~~~~~~~ipvi 152 (212)
T 2v82_A 131 SA-FGPQYIKALKAVLPSDIAVF 152 (212)
T ss_dssp HH-HCHHHHHHHHTTSCTTCEEE
T ss_pred CC-CCHHHHHHHHHhccCCCeEE
Confidence 32 22356666666544 4543
No 129
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=78.89 E-value=14 Score=34.44 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhcC--CCeEEEec-----CCCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 159 KDFHRRRLQVLVESG--PDLLAFET-----IPNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 159 ~~~h~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
.+.+...++.|.+.| +|.|-+.. .|++.+++.+++.+...+ +|+||| +.+.
T Consensus 201 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G--l~i~iTElDi~ 259 (356)
T 2uwf_A 201 RDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSLG--LDNQVTELDMS 259 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHhcC--CcEEEEecccc
Confidence 344667888888888 59987753 378999999999888664 999999 4443
No 130
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=77.61 E-value=17 Score=34.07 Aligned_cols=85 Identities=13% Similarity=0.146 Sum_probs=51.8
Q ss_pred CccEEEEEEecCCCCCCCCCCHHHHHHHHHhc-CCceEEEECCCCh-----------hhhHHHHHHHHhh-------cCC
Q 020275 201 QIPSWICFSSVDGENAPSGESFKECLDIINKS-GKVNAVGINCAPP-----------QFVENLICYFKEL-------TKK 261 (328)
Q Consensus 201 ~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~-~~~~~iGvNC~~p-----------~~~~~~l~~l~~~-------~~~ 261 (328)
+.|+.+++.-... +..++++.+..++.. ..+++|=|||+.| +.+..+++.+++. .+.
T Consensus 146 ~~pv~vniggn~~----t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~ 221 (367)
T 3zwt_A 146 GLPLGVNLGKNKT----SVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRP 221 (367)
T ss_dssp TCCEEEEECCCTT----CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCC
T ss_pred CceEEEEEecCCC----CCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCc
Confidence 4899999942111 134555554433221 2468899998754 3345566665543 567
Q ss_pred eEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCe
Q 020275 262 AIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAK 304 (328)
Q Consensus 262 pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 304 (328)
|+.++-..+ ++.+++.+.++...+.|+.
T Consensus 222 Pv~vKi~p~---------------~~~~~~~~ia~~~~~aGad 249 (367)
T 3zwt_A 222 AVLVKIAPD---------------LTSQDKEDIASVVKELGID 249 (367)
T ss_dssp EEEEEECSC---------------CCHHHHHHHHHHHHHHTCC
T ss_pred eEEEEeCCC---------------CCHHHHHHHHHHHHHcCCC
Confidence 988865321 2456788888888888874
No 131
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=77.60 E-value=10 Score=32.78 Aligned_cols=97 Identities=12% Similarity=0.065 Sum_probs=55.1
Q ss_pred HHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCC-----CCHHHHHHHHHhcCCc
Q 020275 163 RRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSG-----ESFKECLDIINKSGKV 235 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G-----~~~~~~~~~~~~~~~~ 235 (328)
.++++.+.+.|+|.+.+- .++++..+.. ..+..+ ..+.+++.+..+.-..+| .+..+.+..+.+ .++
T Consensus 87 ~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~---~~~~~g--~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~-~G~ 160 (244)
T 1vzw_A 87 DDTLAAALATGCTRVNLGTAALETPEWVAK---VIAEHG--DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNK-EGC 160 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHHHHHH---HHHHHG--GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHH-TTC
T ss_pred HHHHHHHHHcCCCEEEECchHhhCHHHHHH---HHHHcC--CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHh-CCC
Confidence 346777888999998765 4555544444 444443 345667766532111122 155566555544 467
Q ss_pred eEEEECCCChhh-----hHHHHHHHHhhcCCeEEE
Q 020275 236 NAVGINCAPPQF-----VENLICYFKELTKKAIVV 265 (328)
Q Consensus 236 ~~iGvNC~~p~~-----~~~~l~~l~~~~~~pl~~ 265 (328)
..|.++...++. -...++++.+..+.|+++
T Consensus 161 ~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia 195 (244)
T 1vzw_A 161 ARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVA 195 (244)
T ss_dssp CCEEEEEC-------CCCHHHHHHHHHTCSSCEEE
T ss_pred CEEEEeccCcccccCCCCHHHHHHHHHhcCCCEEE
Confidence 777777654322 246777887776778765
No 132
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=77.56 E-value=31 Score=31.41 Aligned_cols=140 Identities=12% Similarity=0.053 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEEec----------CCCHHHHHHHHHHHHhc--------CCCccEEEEEEecCCCCCCC
Q 020275 157 KLKDFHRRRLQVLVESGPDLLAFET----------IPNKLEAQALVELLEEE--------NIQIPSWICFSSVDGENAPS 218 (328)
Q Consensus 157 e~~~~h~~qi~~l~~~gvD~i~~ET----------~~~~~E~~a~~~~~~~~--------~~~~pv~is~~~~~~~~l~~ 218 (328)
+..+.|...++.+.+ |+|.|-+-- +.+...+..+++++++. +.+.|+++-++.. + +
T Consensus 150 ~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~----~-~ 223 (336)
T 1f76_A 150 QGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD----L-S 223 (336)
T ss_dssp GTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC----C-C
T ss_pred ccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC----C-C
Confidence 444556666666654 899985542 12334445566666653 2368999876421 0 1
Q ss_pred CCCHHHHHHHHHhcCCceEEEECCCC--------------------h---hhhHHHHHHHHhhc--CCeEEEEeCCCCcc
Q 020275 219 GESFKECLDIINKSGKVNAVGINCAP--------------------P---QFVENLICYFKELT--KKAIVVYPNSGEVW 273 (328)
Q Consensus 219 G~~~~~~~~~~~~~~~~~~iGvNC~~--------------------p---~~~~~~l~~l~~~~--~~pl~~ypN~g~~~ 273 (328)
-+.+.+.++.+.+ .++++|-+-.+. + ......++.+++.. +.|+++ ++|.
T Consensus 224 ~~~~~~~a~~l~~-~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~--~GGI-- 298 (336)
T 1f76_A 224 EEELIQVADSLVR-HNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIG--VGGI-- 298 (336)
T ss_dssp HHHHHHHHHHHHH-TTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEE--ESSC--
T ss_pred HHHHHHHHHHHHH-cCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEE--ECCC--
Confidence 1123344555544 478887764321 0 01235566666665 567654 3331
Q ss_pred CCccccccCCCCCChhHHHHHHHHHHHcCCeEEeecCC--C-ChHHHHHHHHH
Q 020275 274 DGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCR--T-TPSTIQAVSKV 323 (328)
Q Consensus 274 d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCG--t-~P~hI~al~~~ 323 (328)
.++++..+ .++.||..|+=+-+ . +|..++.+++.
T Consensus 299 ------------~~~~da~~----~l~~GAd~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 299 ------------DSVIAARE----KIAAGASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp ------------CSHHHHHH----HHHHTCSEEEESHHHHHHCHHHHHHHHHH
T ss_pred ------------CCHHHHHH----HHHCCCCEEEeeHHHHhcCcHHHHHHHhh
Confidence 13434333 44568888875544 2 67777777653
No 133
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=77.47 E-value=23 Score=30.66 Aligned_cols=98 Identities=13% Similarity=0.171 Sum_probs=58.8
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
.+-|+.+.+.-+.|.++|||+|+.+.|... +.++.+++.+++ + +..++|.
T Consensus 74 ~DipnTv~~~~~~~~~~gad~vtvh~~~G~---------------~~l~~~~~~~~~----~-----------g~~v~vL 123 (228)
T 3m47_A 74 ADIPETNEKICRATFKAGADAIIVHGFPGA---------------DSVRACLNVAEE----M-----------GREVFLL 123 (228)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEESTTCH---------------HHHHHHHHHHHH----H-----------TCEEEEE
T ss_pred cccHhHHHHHHHHHHhCCCCEEEEeccCCH---------------HHHHHHHHHHHh----c-----------CCCeEEE
Confidence 478999999999999999999998766521 222333333332 1 2356666
Q ss_pred eecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHH
Q 020275 130 ASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELL 195 (328)
Q Consensus 130 GsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~ 195 (328)
.+..+-+.. . ..+ ..+...++.-.+.|+|.+..-. ....|++.+.+..
T Consensus 124 t~~s~~~~~------------~--~~~---~~~~~~a~~a~~~G~~GvV~~a-t~~~e~~~ir~~~ 171 (228)
T 3m47_A 124 TEMSHPGAE------------M--FIQ---GAADEIARMGVDLGVKNYVGPS-TRPERLSRLREII 171 (228)
T ss_dssp CCCCSGGGG------------T--THH---HHHHHHHHHHHHTTCCEEECCS-SCHHHHHHHHHHH
T ss_pred EeCCCccHH------------H--HHH---HHHHHHHHHHHHhCCcEEEECC-CChHHHHHHHHhc
Confidence 666554320 0 111 3334444555678999988653 3567766555543
No 134
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=77.09 E-value=10 Score=33.99 Aligned_cols=98 Identities=16% Similarity=0.071 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEE-----ec-CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAF-----ET-IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL 226 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 226 (328)
++.+.+ +..++.+.+. ||.|++ |. .-+.+|=+.+++.+.+ +.||++.. .+.+..+++
T Consensus 16 iD~~~l----~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGv---------g~~~t~~ai 78 (283)
T 2pcq_A 16 LDEEAF----RELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP---RKPFLVGL---------MEETLPQAE 78 (283)
T ss_dssp BCHHHH----HHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEE---------CCSSHHHHH
T ss_pred cCHHHH----HHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeC---------CCCCHHHHH
Confidence 565554 6778888888 998765 22 2356777788887775 59999887 345677887
Q ss_pred HHHHh--cCCceEEEECCCC---h---hhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 227 DIINK--SGKVNAVGINCAP---P---QFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 227 ~~~~~--~~~~~~iGvNC~~---p---~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
+..+. ..+++++.+-.-. | +.+....+.+.+ +.|+++|=+-
T Consensus 79 ~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~--~lPiilYn~P 127 (283)
T 2pcq_A 79 GALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE--KMPLFLYHVP 127 (283)
T ss_dssp HHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH--HSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc--CCCEEEEeCc
Confidence 65532 2478888887642 3 345555666666 6899999874
No 135
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=76.92 E-value=43 Score=32.20 Aligned_cols=68 Identities=16% Similarity=0.270 Sum_probs=45.2
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
.++++.+.++|+|.|.+-+. .+.......++.+++.-.++|+++. .+.+.+++....+ .++++|-+.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g----------~~~t~e~a~~l~~--~G~d~I~v~ 306 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG----------NVATPEGTEALIK--AGADAVKVG 306 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE----------EECSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC----------CcCCHHHHHHHHH--cCCCEEEEc
Confidence 56889999999999987543 3334455566666665225898872 3566777755443 468888774
Q ss_pred C
Q 020275 242 C 242 (328)
Q Consensus 242 C 242 (328)
.
T Consensus 307 ~ 307 (494)
T 1vrd_A 307 V 307 (494)
T ss_dssp S
T ss_pred C
Confidence 3
No 136
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=76.89 E-value=22 Score=31.94 Aligned_cols=137 Identities=11% Similarity=0.039 Sum_probs=76.3
Q ss_pred HHHHHHHHHhcCCC---eEEEec-----------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 162 HRRRLQVLVESGPD---LLAFET-----------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 162 h~~qi~~l~~~gvD---~i~~ET-----------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
|.+.++.+.+.|+| +|-+-- ..+.+.+..+++++++.- ++|+++-++.. + +-+.+.+.++
T Consensus 108 ~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~----~-~~~~~~~~a~ 181 (314)
T 2e6f_A 108 NVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPY----F-DIAHFDTAAA 181 (314)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCC----C-CHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCC----C-CHHHHHHHHH
Confidence 56677777778889 665431 115666777788887653 58999887532 1 1112333455
Q ss_pred HHHhcCC-ceEEEECCCC--------------------------h---hhhHHHHHHHHhhc-CCeEEEEeCCCCccCCc
Q 020275 228 IINKSGK-VNAVGINCAP--------------------------P---QFVENLICYFKELT-KKAIVVYPNSGEVWDGR 276 (328)
Q Consensus 228 ~~~~~~~-~~~iGvNC~~--------------------------p---~~~~~~l~~l~~~~-~~pl~~ypN~g~~~d~~ 276 (328)
.+.+ .+ +++|-+-.+. + ......++++++.. +.|+++ |+|.
T Consensus 182 ~~~~-aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~--~GGI----- 253 (314)
T 2e6f_A 182 VLNE-FPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFG--CGGV----- 253 (314)
T ss_dssp HHHT-CTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEE--ESSC-----
T ss_pred HHHh-cCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEE--ECCC-----
Confidence 5544 47 7776433211 1 01246667777776 667544 4442
Q ss_pred cccccCCCCCChhHHHHHHHHHHHcCCeEEeecCC---CChHHHHHHHHHHh
Q 020275 277 AKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCR---TTPSTIQAVSKVLK 325 (328)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCG---t~P~hI~al~~~l~ 325 (328)
.++++..+ ++..||..|+=+-+ -+|..++.+++.+.
T Consensus 254 ---------~~~~da~~----~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l~ 292 (314)
T 2e6f_A 254 ---------YSGEDAFL----HILAGASMVQVGTALQEEGPGIFTRLEDELL 292 (314)
T ss_dssp ---------CSHHHHHH----HHHHTCSSEEECHHHHHHCTTHHHHHHHHHH
T ss_pred ---------CCHHHHHH----HHHcCCCEEEEchhhHhcCcHHHHHHHHHHH
Confidence 13444443 34567776654333 36777777766553
No 137
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=76.69 E-value=45 Score=30.44 Aligned_cols=140 Identities=13% Similarity=0.103 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhcCCCeE-EEecCC-----CHHHHHHH-----HHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 161 FHRRRLQVLVESGPDLL-AFETIP-----NKLEAQAL-----VELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i-~~ET~~-----~~~E~~a~-----~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
+....++...++|+|.| ++++.. +.+..+.. .+.++..+ ..|+ +-| | |.. ...+..+
T Consensus 191 ~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~-~~~i-ih~-~--------g~~-~~~l~~~ 258 (348)
T 4ay7_A 191 ASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVN-SVTV-LHI-C--------GNV-NPILSDM 258 (348)
T ss_dssp HHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSS-SEEE-EEC-C--------SCC-HHHHHHH
T ss_pred HHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhcc-CCcE-EEe-c--------CCc-HHHHHHH
Confidence 33444566677999987 566543 44554433 23333333 3443 222 2 221 2345555
Q ss_pred HhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEeec
Q 020275 230 NKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGC 309 (328)
Q Consensus 230 ~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGC 309 (328)
.+ .+++++++--. .+. ++..++..+..+.++.|- |+. ..+.. -++++..+.+++.++.|-.|++--
T Consensus 259 ~~-~g~d~i~~d~~-~~~----~~~~k~~~g~~~~l~Gnl----dp~--~~l~~--g~~e~i~~~v~~~l~~~g~I~~~G 324 (348)
T 4ay7_A 259 AD-CGFEGLSVEEK-IGS----AKKGKEVIGTRARLVGNV----SSP--FTLLP--GPVDKIKAEAKEALEGGIDVLAPG 324 (348)
T ss_dssp HT-SCCSEEECCGG-GCC----HHHHHHHHTTSSEEEEEE----CCC--CCCTT--CCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HH-hccccccccch-hhH----HHHHHHHhCCCEEEEcCC----CCh--HhhcC--CCHHHHHHHHHHHHhCCCCEEeCC
Confidence 54 46777775321 011 222333333344455552 110 01111 157889999999999888898866
Q ss_pred CC----CChHHHHHHHHHHhc
Q 020275 310 CR----TTPSTIQAVSKVLKE 326 (328)
Q Consensus 310 CG----t~P~hI~al~~~l~~ 326 (328)
|| |.|++|+++.+++++
T Consensus 325 hgi~p~tp~env~a~v~av~e 345 (348)
T 4ay7_A 325 CGIAPMTPLENVKALVAARDE 345 (348)
T ss_dssp SSCCTTCCHHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHH
Confidence 76 567999999998875
No 138
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=76.48 E-value=34 Score=28.98 Aligned_cols=118 Identities=12% Similarity=0.147 Sum_probs=70.6
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
.++++...+.|+|++..-- .+ ..++++.++.+ .|+++.+ .+++++..... .+++.|++
T Consensus 73 ~d~~~~A~~~GAd~v~~~~-~d----~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~v~~-- 130 (207)
T 2yw3_A 73 PKEAEAALEAGAAFLVSPG-LL----EEVAALAQARG--VPYLPGV-----------LTPTEVERALA--LGLSALKF-- 130 (207)
T ss_dssp HHHHHHHHHHTCSEEEESS-CC----HHHHHHHHHHT--CCEEEEE-----------CSHHHHHHHHH--TTCCEEEE--
T ss_pred HHHHHHHHHcCCCEEEcCC-CC----HHHHHHHHHhC--CCEEecC-----------CCHHHHHHHHH--CCCCEEEE--
Confidence 3578888889999997542 22 33455566554 7877663 14677776654 47889988
Q ss_pred CChhh---hHHHHHHHHhhc-CCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEee---cCCCChH
Q 020275 243 APPQF---VENLICYFKELT-KKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGG---CCRTTPS 315 (328)
Q Consensus 243 ~~p~~---~~~~l~~l~~~~-~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGG---CCGt~P~ 315 (328)
.|.. -...|+.++... +.|++ |=+| +++++ +.+|++.|+..++. =|.-+++
T Consensus 131 -fpa~~~gG~~~lk~l~~~~~~ipvv--aiGG---------------I~~~n----~~~~l~aGa~~vavgSai~~~d~~ 188 (207)
T 2yw3_A 131 -FPAEPFQGVRVLRAYAEVFPEVRFL--PTGG---------------IKEEH----LPHYAALPNLLAVGGSWLLQGNLE 188 (207)
T ss_dssp -TTTTTTTHHHHHHHHHHHCTTCEEE--EBSS---------------CCGGG----HHHHHTCSSBSCEEESGGGSSCHH
T ss_pred -ecCccccCHHHHHHHHhhCCCCcEE--EeCC---------------CCHHH----HHHHHhCCCcEEEEehhhhCCCHH
Confidence 3321 346777777665 46764 3333 33433 44478888643322 1334566
Q ss_pred HHHHHHHHH
Q 020275 316 TIQAVSKVL 324 (328)
Q Consensus 316 hI~al~~~l 324 (328)
.|++.++.+
T Consensus 189 ~i~~~a~~~ 197 (207)
T 2yw3_A 189 AVRAKVRAA 197 (207)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 677766654
No 139
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=75.62 E-value=48 Score=30.24 Aligned_cols=143 Identities=10% Similarity=0.083 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHhcCCCeE-EEecC---CCHHHHH--------HHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 158 LKDFHRRRLQVLVESGPDLL-AFETI---PNKLEAQ--------ALVELLEEENIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 158 ~~~~h~~qi~~l~~~gvD~i-~~ET~---~~~~E~~--------a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
+.+...+.++.+.++|+|.| ++++. -+..+.+ .+++.+++.+.+.|++ -| |.... ..
T Consensus 191 l~~~~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~i-h~-c~g~~---------~~ 259 (353)
T 1j93_A 191 FATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLI-LY-ASGSG---------GL 259 (353)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEE-EE-CSSCT---------TT
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEE-EE-CCChH---------HH
Confidence 34444555677778999976 46654 3444433 3355555542146764 33 42222 12
Q ss_pred HHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc-CC-
Q 020275 226 LDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS-GA- 303 (328)
Q Consensus 226 ~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~- 303 (328)
+..+.+ .+++++++.-.. .+..+.+. .+.-+.++.|- |+. .+. -++++..+.+++.++. |.
T Consensus 260 l~~l~~-~g~d~~~~d~~~--d~~~~~~~----~g~~~~l~Gnl----dp~---~l~---~~~e~i~~~v~~~l~~~~~~ 322 (353)
T 1j93_A 260 LERLPL-TGVDVVSLDWTV--DMADGRRR----LGPNVAIQGNV----DPG---VLF---GSKEFITNRINDTVKKAGKG 322 (353)
T ss_dssp GGGGGG-GCCSEEECCTTS--CHHHHHHH----TCSSSEEECCB----CGG---GGG---SCHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHh-cCCCEEEeCCCC--CHHHHHHH----cCCCeEEEecC----CHH---HHc---CCHHHHHHHHHHHHHHhCCC
Confidence 233433 467888887542 12222222 23334555552 221 122 2688899999888765 54
Q ss_pred -eEEeecCC----CChHHHHHHHHHHhcCC
Q 020275 304 -KLIGGCCR----TTPSTIQAVSKVLKERS 328 (328)
Q Consensus 304 -~iiGGCCG----t~P~hI~al~~~l~~~~ 328 (328)
-|++--|| |.|++++++.+.+++.|
T Consensus 323 g~I~~~g~gi~~~~~~enl~a~ve~v~~~~ 352 (353)
T 1j93_A 323 KHILNLGHGIKVGTPEENFAHFFEIAKGLR 352 (353)
T ss_dssp SEEBCBSSCCCTTCCHHHHHHHHHHHHTCC
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 67777776 58899999999987653
No 140
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=75.29 E-value=31 Score=31.22 Aligned_cols=114 Identities=15% Similarity=0.093 Sum_probs=64.3
Q ss_pred HHHHHhcCCCeEEEe-cCC------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCC-CCCCHHHHHHHHHhcCCceE
Q 020275 166 LQVLVESGPDLLAFE-TIP------NKLEAQALVELLEEENIQIPSWICFSSVDGENAP-SGESFKECLDIINKSGKVNA 237 (328)
Q Consensus 166 i~~l~~~gvD~i~~E-T~~------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~-~G~~~~~~~~~~~~~~~~~~ 237 (328)
++..++.|+|.+.+= .+- .+.|+..+++.+++.+ +|+++- +.. +.++. |.+.+..+++...+ .+++.
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~G--lpvIie-~~~-G~~~~~d~e~i~~aariA~e-lGAD~ 205 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVG--MPTMAV-TGV-GKDMVRDQRYFSLATRIAAE-MGAQI 205 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTT--CCEEEE-ECC-----CCSHHHHHHHHHHHHH-TTCSE
T ss_pred HHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcC--CEEEEE-CCC-CCccCCCHHHHHHHHHHHHH-hCCCE
Confidence 344456898887542 222 3455666777777654 898874 322 22221 21123334554444 58899
Q ss_pred EEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCe
Q 020275 238 VGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAK 304 (328)
Q Consensus 238 iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 304 (328)
|.++-+ ++. ++++....+.|+++- +|. . .+.+++.+.+++.++.|+.
T Consensus 206 VKt~~t-~e~----~~~vv~~~~vPVv~~--GG~-----------~--~~~~~~l~~v~~ai~aGA~ 252 (295)
T 3glc_A 206 IKTYYV-EKG----FERIVAGCPVPIVIA--GGK-----------K--LPEREALEMCWQAIDQGAS 252 (295)
T ss_dssp EEEECC-TTT----HHHHHHTCSSCEEEE--CCS-----------C--CCHHHHHHHHHHHHHTTCS
T ss_pred EEeCCC-HHH----HHHHHHhCCCcEEEE--ECC-----------C--CCHHHHHHHHHHHHHhCCe
Confidence 999854 333 445554556787652 121 0 1466788888888899985
No 141
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=75.20 E-value=50 Score=30.26 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHhcCCCeEE-EecC---CCHHHHH--------HHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHH
Q 020275 157 KLKDFHRRRLQVLVESGPDLLA-FETI---PNKLEAQ--------ALVELLEEENIQIPSWICFSSVDGENAPSGESFKE 224 (328)
Q Consensus 157 e~~~~h~~qi~~l~~~gvD~i~-~ET~---~~~~E~~--------a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~ 224 (328)
.+.+...+.++.+.++|+|.|. +++. -+.++.+ .+++.+++. +.|++ -|++ |. ..
T Consensus 190 ~i~~~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~--g~~~i-~~~~--------G~--~~ 256 (359)
T 2inf_A 190 KLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE--NVPLI-MFGV--------GA--SH 256 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG--CSCEE-EECT--------TC--GG
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc--CCcEE-EEcC--------Cc--HH
Confidence 3444555567777789999764 5543 3333322 334555544 36765 4433 22 12
Q ss_pred HHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC-
Q 020275 225 CLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA- 303 (328)
Q Consensus 225 ~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~- 303 (328)
.+..+.+ .+++++++--..+ ++.+++. +.-+.++.|- |+. .+. -++++..+.+++.++.|.
T Consensus 257 ~l~~l~~-~g~d~~~~d~~~d------~~~~~~~-g~~~~l~Gnl----dp~---~l~---~t~e~I~~~v~~~l~~~~~ 318 (359)
T 2inf_A 257 LAGDWHD-LPLDVVGLDWRLG------IDEARSK-GITKTVQGNL----DPS---ILL---APWEVIEQKTKEILDQGME 318 (359)
T ss_dssp GHHHHHT-SSCSEEECCTTSC------HHHHHHT-TCCSEEECCB----CGG---GGG---SCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHH-hCCCEEEeCCCCC------HHHHHHc-CCCEEEEecC----ChH---Hhc---CCHHHHHHHHHHHHHhCCC
Confidence 3444544 5788888754321 2333333 3334566663 221 121 268888888888876543
Q ss_pred ---eEEeecCC----CChHHHHHHHHHHhc
Q 020275 304 ---KLIGGCCR----TTPSTIQAVSKVLKE 326 (328)
Q Consensus 304 ---~iiGGCCG----t~P~hI~al~~~l~~ 326 (328)
-|++--|| |.|++|+++.+.++.
T Consensus 319 ~~g~Il~~gcgi~~~~~~enl~a~ve~v~~ 348 (359)
T 2inf_A 319 SDGFIFNLGHGVFPDVSPEVLKKLTAFVHE 348 (359)
T ss_dssp SSCEEBCBSSCCCTTSCHHHHHHHHHHHHH
T ss_pred CCCeEEeCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46777777 466999999988764
No 142
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=75.08 E-value=2.1 Score=38.22 Aligned_cols=38 Identities=13% Similarity=0.287 Sum_probs=31.6
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
.++++++.++|+|.|++|.+|+.++++.+.+.+ +.|+-
T Consensus 171 i~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~n 208 (255)
T 2qiw_A 171 IKRIKLMEQAGARSVYPVGLSTAEQVERLVDAV-----SVPVN 208 (255)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC-----SSCBE
T ss_pred HHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC-----CCCEE
Confidence 568899999999999999999999988777644 36764
No 143
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=74.18 E-value=48 Score=29.60 Aligned_cols=152 Identities=13% Similarity=0.038 Sum_probs=84.4
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|+|-|..+==..-. ..++.+|-.++.+.+++.+. ++-..|+|.
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~-----------------gr~pviaGv 76 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGES-----PTLSKSEHEQVVEITIKTAN-----------------GRVPVIAGA 76 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTG-----GGSCHHHHHHHHHHHHHHHT-----------------TSSCBEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhC-----------------CCCcEEEec
Confidence 45678888888889999977654211111 13465666677666665532 233456664
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC----CCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI----PNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
-+. +.++. .++++...+.|+|.+++=+= |+.+++..-.+.+.+.. ++|+++=
T Consensus 77 g~~-------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilY 132 (292)
T 2vc6_A 77 GSN-------------------STAEA----IAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS-TIPIIVY 132 (292)
T ss_dssp CCS-------------------SHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred CCc-------------------cHHHH----HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEE
Confidence 322 22222 45666677889999987652 46677776666665543 6999853
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHH
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLI 252 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l 252 (328)
=.. +++.-.-+.+...+..++.+++.+|=--|.....+..++
T Consensus 133 n~P---~~tg~~l~~~~~~~La~~~pnIvgiK~s~gd~~~~~~~~ 174 (292)
T 2vc6_A 133 NIP---GRSAIEIHVETLARIFEDCPNVKGVXDATGNLLRPSLER 174 (292)
T ss_dssp ECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHH
T ss_pred eCc---cccCcCCCHHHHHHHHhhCCCEEEEecCCCCHHHHHHHH
Confidence 211 122122344444444431455544444444444554444
No 144
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=74.13 E-value=52 Score=30.81 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=42.7
Q ss_pred HHHHHHHHhcCCCeEEEec-CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFET-IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.++++.+.+.|+|++.+-+ ..+......+++.+++.-.++|+++. .+.+.+++.... + .++++|.+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~----------~v~~~~~a~~a~-~-~Gad~I~v 221 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG----------NIVTKEAALDLI-S-VGADCLKV 221 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE----------EECSHHHHHHHH-T-TTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc----------CCCcHHHHHHHH-h-cCCCEEEE
Confidence 4567778889999998743 33445566667777765215899872 234556555544 3 47888888
No 145
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=74.12 E-value=42 Score=28.91 Aligned_cols=108 Identities=11% Similarity=0.111 Sum_probs=66.6
Q ss_pred HHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC
Q 020275 164 RRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA 243 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~ 243 (328)
++++...+.|+|++..- .. -..++++.++.+ .|+++.. .+++++..... .+++.|++
T Consensus 89 d~~~~A~~aGAd~v~~p---~~--d~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~vk~--- 145 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTP---GI--TEDILEAGVDSE--IPLLPGI-----------STPSEIMMGYA--LGYRRFKL--- 145 (225)
T ss_dssp HHHHHHHHHTCSSEECS---SC--CHHHHHHHHHCS--SCEECEE-----------CSHHHHHHHHT--TTCCEEEE---
T ss_pred HHHHHHHHCCCCEEEeC---CC--CHHHHHHHHHhC--CCEEEee-----------CCHHHHHHHHH--CCCCEEEE---
Confidence 57888888999999854 22 134556666654 7777652 23577776553 47899999
Q ss_pred Ch-hhh--HHHHHHHHhhc-CCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHH-cCCeEEeecCCCChH
Q 020275 244 PP-QFV--ENLICYFKELT-KKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRD-SGAKLIGGCCRTTPS 315 (328)
Q Consensus 244 ~p-~~~--~~~l~~l~~~~-~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~iiGGCCGt~P~ 315 (328)
.| ..+ ...|+.++... +.|++ |=+| +++++. .+|++ .|+..+||--=+..+
T Consensus 146 FPa~~~~G~~~lk~i~~~~~~ipvv--aiGG---------------I~~~N~----~~~l~~~Ga~~v~gSai~~~~ 201 (225)
T 1mxs_A 146 FPAEISGGVAAIKAFGGPFGDIRFC--PTGG---------------VNPANV----RNYMALPNVMCVGTTWMLDSS 201 (225)
T ss_dssp TTHHHHTHHHHHHHHHTTTTTCEEE--EBSS---------------CCTTTH----HHHHHSTTBCCEEECTTSCHH
T ss_pred ccCccccCHHHHHHHHhhCCCCeEE--EECC---------------CCHHHH----HHHHhccCCEEEEEchhcCch
Confidence 54 222 56778777655 45653 3333 234433 44778 588877755444444
No 146
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=73.88 E-value=18 Score=33.20 Aligned_cols=91 Identities=11% Similarity=0.022 Sum_probs=53.4
Q ss_pred hcCCCeEEEec-CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC----Ch
Q 020275 171 ESGPDLLAFET-IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA----PP 245 (328)
Q Consensus 171 ~~gvD~i~~ET-~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~----~p 245 (328)
..|+|.|.+-+ ..+++++..+++.+++.+ ..+..++.........+ .-+..+ ..++ .++..|.+-=+ .|
T Consensus 98 ~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G--~~v~~~~~~~~~~~~~~-~~l~~~-~~~~--~G~~~i~l~Dt~G~~~P 171 (320)
T 3dxi_A 98 IGLVDMIRIAIDPQNIDRAIVLAKAIKTMG--FEVGFNVMYMSKWAEMN-GFLSKL-KAID--KIADLFCMVDSFGGITP 171 (320)
T ss_dssp TTTCSEEEEEECGGGHHHHHHHHHHHHTTT--CEEEEEECCTTTGGGST-TSGGGG-GGGT--TTCSEEEEECTTSCCCH
T ss_pred hcCCCEEEEEecHHHHHHHHHHHHHHHHCC--CEEEEEEEeCCCCCCHH-HHHHHH-HHhh--CCCCEEEECcccCCCCH
Confidence 48999986554 334677777777788775 55544443211110000 112111 1122 35666666543 49
Q ss_pred hhhHHHHHHHHhhcCCeEEEEe
Q 020275 246 QFVENLICYFKELTKKAIVVYP 267 (328)
Q Consensus 246 ~~~~~~l~~l~~~~~~pl~~yp 267 (328)
..+..+++.+++..+.||.+..
T Consensus 172 ~~~~~lv~~l~~~~~~~i~~H~ 193 (320)
T 3dxi_A 172 KEVKNLLKEVRKYTHVPVGFHG 193 (320)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEC
T ss_pred HHHHHHHHHHHHhCCCeEEEEe
Confidence 9999999999988777877754
No 147
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=73.85 E-value=49 Score=29.48 Aligned_cols=146 Identities=12% Similarity=0.096 Sum_probs=78.0
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|+|-|..+=-..-.. -++.+|-.++.+.+++.+ .+ .|+|.
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~-----------------~g---vi~Gv 71 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGTTGLGP-----ALSLQEKMELTDAATSAA-----------------RR---VIVQV 71 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTGG-----GSCHHHHHHHHHHHHHHC-----------------SS---EEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHh-----------------CC---EEEee
Confidence 356788888888899999665432111111 245555666655555432 12 56664
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC-----CCHHHHHHHHHHHHhcCCCccEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI-----PNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~-----~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
-+. +.++. .++++...+.|+|.+++=+= |+.+++..-.+.+.+.. ++|+++
T Consensus 72 g~~-------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~-~lPiil 127 (286)
T 2r91_A 72 ASL-------------------NADEA----IALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAV-SIPVFL 127 (286)
T ss_dssp CCS-------------------SHHHH----HHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred CCC-------------------CHHHH----HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 322 22332 34666677789999877542 46666666666655543 689885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
==.. +++.-.-+.+...+ .+++.+|=--|.....+..+++
T Consensus 128 Yn~P---~~tg~~l~~~~~~~----~pnivgiKds~gd~~~~~~~~~ 167 (286)
T 2r91_A 128 YNYP---AAVGRDVDARAAKE----LGCIRGVKDTNESLAHTLAYKR 167 (286)
T ss_dssp EECH---HHHSSCCCHHHHHH----HSCEEEEEECCSCHHHHHHHHH
T ss_pred EeCh---hhcCCCCCHHHHHh----cCCEEEEEeCCCCHHHHHHHHh
Confidence 3211 12111233443333 2455444444444555555544
No 148
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=73.66 E-value=50 Score=29.48 Aligned_cols=153 Identities=18% Similarity=0.109 Sum_probs=83.5
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|+|-|..+==..-.. -++.+|-.++.+.+++.+. ++-..|+|.
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~-----------------gr~pviaGv 76 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTGESP-----TLSHEEHKKVIEKVVDVVN-----------------GRVQVIAGA 76 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC-----------------CCCcEEEeC
Confidence 456788888888999999665432111111 2455666677666665542 233455654
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++=
T Consensus 77 -g~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilY 132 (289)
T 2yxg_A 77 -GSN------------------CTEEA----IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI-NLPIVLY 132 (289)
T ss_dssp -CCS------------------SHHHH----HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred -CCC------------------CHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEE
Confidence 331 22332 4466667778999987754 256677766666655543 6998853
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
=.. +++.-.-+.+...+..++.+++.+|=-.|.....+..+++
T Consensus 133 n~P---~~tg~~l~~~~~~~La~~~pnivgiK~s~gd~~~~~~~~~ 175 (289)
T 2yxg_A 133 NVP---SRTAVNLEPKTVKLLAEEYSNISAVKEANPNLSQVSELIH 175 (289)
T ss_dssp ECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECCSCTHHHHHHHH
T ss_pred eCc---cccCcCCCHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHH
Confidence 211 2221223455444544244554444434444455554443
No 149
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=73.56 E-value=51 Score=29.58 Aligned_cols=101 Identities=10% Similarity=0.014 Sum_probs=63.4
Q ss_pred HHHHHHHhcCCCeEEEecCC-C--------------HHHHHHHHHHHHhcCCCccEEEEEE----ecCCCCCCCCCCHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP-N--------------KLEAQALVELLEEENIQIPSWICFS----SVDGENAPSGESFKE 224 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~-~--------------~~E~~a~~~~~~~~~~~~pv~is~~----~~~~~~l~~G~~~~~ 224 (328)
+.++...++|+|.+.+-.=. + ++.++.+++.+++.+ +.|-..+. +.+++ -++++.
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~----~~~~~~ 160 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQ--VRVRGYISCVLGCPYDG----DVDPRQ 160 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTB----CCCHHH
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCC----CCCHHH
Confidence 45666777899998763222 2 244566778888776 55543333 22222 255666
Q ss_pred HHHHHHh--cCCceEEEECC----CChhhhHHHHHHHHhhc-CCeEEEEe--CCC
Q 020275 225 CLDIINK--SGKVNAVGINC----APPQFVENLICYFKELT-KKAIVVYP--NSG 270 (328)
Q Consensus 225 ~~~~~~~--~~~~~~iGvNC----~~p~~~~~~l~~l~~~~-~~pl~~yp--N~g 270 (328)
+++.++. ..+++.|.+-= ..|..+..+++.+++.. +.||.+.. +.|
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 215 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYG 215 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCcc
Confidence 6655531 24666654442 35999999999999887 47999988 555
No 150
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=73.31 E-value=30 Score=32.77 Aligned_cols=65 Identities=15% Similarity=0.094 Sum_probs=37.7
Q ss_pred HHHHHHHhcCCCeEEEe-------c--------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFE-------T--------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~E-------T--------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
+.++.+.++|+|+|.+- | .|.+.-+..+.+++++. ++||+.+--+ .+..+++..
T Consensus 196 e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~--~IPVIA~GGI---------~~~~di~ka 264 (400)
T 3ffs_A 196 EATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPIIADGGI---------RYSGDIGKA 264 (400)
T ss_dssp HHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTT--TCCEEEESCC---------CSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhc--CCCEEecCCC---------CCHHHHHHH
Confidence 45677888999999882 1 24444444444444433 5898854211 235566666
Q ss_pred HHhcCCceEEEEC
Q 020275 229 INKSGKVNAVGIN 241 (328)
Q Consensus 229 ~~~~~~~~~iGvN 241 (328)
+. .++++|.+-
T Consensus 265 la--lGAd~V~vG 275 (400)
T 3ffs_A 265 LA--VGASSVMIG 275 (400)
T ss_dssp HT--TTCSEEEEC
T ss_pred HH--cCCCEEEEC
Confidence 64 356776664
No 151
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=73.11 E-value=6.8 Score=36.67 Aligned_cols=56 Identities=27% Similarity=0.323 Sum_probs=39.5
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
+.+|+-...+++ |-+.|||+..| |+ +..+++.|++.+.++++ ++-+|.
T Consensus 61 Lk~~~gr~~l~~--Lv~~ADV~ven-fr--PG~~~rlGl~ye~L~~~---------------------------nP~LIy 108 (360)
T 2yim_A 61 LKSDQGLELALK--LIAKADVLIEG-YR--PGVTERLGLGPEECAKV---------------------------NDRLIY 108 (360)
T ss_dssp TTSHHHHHHHHH--HHTTCSEEEEC-SC--TTHHHHHTCSHHHHHHH---------------------------CTTCEE
T ss_pred CCCHHHHHHHHH--HHhhCCEEEEc-CC--cchHhhcCCCHHHHHHh---------------------------CCCeEE
Confidence 577776555544 45779999999 66 67788889987544331 356788
Q ss_pred eecCCccc
Q 020275 130 ASIGSYGA 137 (328)
Q Consensus 130 GsiGP~g~ 137 (328)
.||..||.
T Consensus 109 ~sisGfG~ 116 (360)
T 2yim_A 109 ARMTGWGQ 116 (360)
T ss_dssp EEEESSCS
T ss_pred EEEecCCC
Confidence 88877775
No 152
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=73.09 E-value=61 Score=35.01 Aligned_cols=101 Identities=14% Similarity=0.121 Sum_probs=64.3
Q ss_pred HHHHHHHhcCCCeE-EEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCC----CCCCHH---HHHHHHHhcCCc
Q 020275 164 RRLQVLVESGPDLL-AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAP----SGESFK---ECLDIINKSGKV 235 (328)
Q Consensus 164 ~qi~~l~~~gvD~i-~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~----~G~~~~---~~~~~~~~~~~~ 235 (328)
.-++...+.|+|.| +|-..+++...+-+.+.+++.+ .-+...++ .-++.+. .-.+++ +.++.+.+ .++
T Consensus 631 ~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g--~~~~~~i~-~~~~~~~pe~~~~~~~~~~~~~a~~~~~-~Ga 706 (1150)
T 3hbl_A 631 KFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAG--KISEGTIC-YTGDILNPERSNIYTLEYYVKLAKELER-EGF 706 (1150)
T ss_dssp HHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTT--CEEEEEEE-CCSCTTCTTTCSSSSHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHh--hheeEEEe-ecccccChhhcCCCCHHHHHHHHHHHHH-cCC
Confidence 34566667899998 6667788888888888888775 32332332 2222211 113444 34444443 467
Q ss_pred eEEEECCC----ChhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 236 NAVGINCA----PPQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 236 ~~iGvNC~----~p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
..|.+-=+ .|..+..+++.+++..+.||.+...
T Consensus 707 ~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~H 743 (1150)
T 3hbl_A 707 HILAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTH 743 (1150)
T ss_dssp SEEEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CeeeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 77766433 4999999999999887778877554
No 153
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=73.01 E-value=47 Score=28.88 Aligned_cols=104 Identities=14% Similarity=0.095 Sum_probs=62.5
Q ss_pred HHHHHHHHHhc-CCCeEEEecCC--CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEE
Q 020275 162 HRRRLQVLVES-GPDLLAFETIP--NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAV 238 (328)
Q Consensus 162 h~~qi~~l~~~-gvD~i~~ET~~--~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i 238 (328)
|.+.++..++. ++|++=+|-.. .-...+.+++.+++. +..+++|+.-.+. +++-+.+.+.+..+.+ .+++.+
T Consensus 85 ~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~--~~kvI~S~Hdf~~--tp~~~el~~~~~~~~~-~gaDiv 159 (238)
T 1sfl_A 85 YLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQY--NKEVIISHHNFES--TPPLDELQFIFFKMQK-FNPEYV 159 (238)
T ss_dssp HHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHT--TCEEEEEEEESSC--CCCHHHHHHHHHHHHT-TCCSEE
T ss_pred HHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhc--CCEEEEEecCCCC--CcCHHHHHHHHHHHHH-cCCCEE
Confidence 44455556655 69999999776 655667777777765 4889999974222 2232223333333333 466665
Q ss_pred EECCC--ChhhhHHHHHHH---HhhcCCeEEEEeCCC
Q 020275 239 GINCA--PPQFVENLICYF---KELTKKAIVVYPNSG 270 (328)
Q Consensus 239 GvNC~--~p~~~~~~l~~l---~~~~~~pl~~ypN~g 270 (328)
=+-+. ++.....+++.. +...+.|++++.-+.
T Consensus 160 Kia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~ 196 (238)
T 1sfl_A 160 KLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSK 196 (238)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTG
T ss_pred EEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 55554 466666666443 333568998887653
No 154
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=72.98 E-value=52 Score=29.45 Aligned_cols=147 Identities=12% Similarity=0.146 Sum_probs=75.6
Q ss_pred ceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec---CCC------HHHHHHHHHHH
Q 020275 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET---IPN------KLEAQALVELL 195 (328)
Q Consensus 125 ~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET---~~~------~~E~~a~~~~~ 195 (328)
+.+|-|-|--+.+++.||..| .+.+++ ..+++.+++.|+|+|=+-. -|. .+|++-++.++
T Consensus 5 ~~~imgilN~TpDSFsdgg~~-------~~~~~a----~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi 73 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGCY-------LDLDDA----VKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVV 73 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCCC-------CSHHHH----HHHHHHHHHTTCSEEEEECC--------------HHHHHHHH
T ss_pred CcEEEEEEeCCCCCcCCCccc-------CCHHHH----HHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHH
Confidence 457888887778888776433 355555 4567778889999985543 232 56666665555
Q ss_pred HhcC-CCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC----hhhhHHHHHHHHhhcCCeEEEEeCCC
Q 020275 196 EEEN-IQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP----PQFVENLICYFKELTKKAIVVYPNSG 270 (328)
Q Consensus 196 ~~~~-~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~----p~~~~~~l~~l~~~~~~pl~~ypN~g 270 (328)
+... .++| ||+. -...+.+-..++. ++. .||=++ .+.+.+++++ .+.|+++.++.|
T Consensus 74 ~~l~~~~~p--iSID---------T~~~~va~aAl~a--Ga~--iINdvsg~~~d~~m~~~~a~----~~~~vVlmh~~G 134 (280)
T 1eye_A 74 KELAAQGIT--VSID---------TMRADVARAALQN--GAQ--MVNDVSGGRADPAMGPLLAE----ADVPWVLMHWRA 134 (280)
T ss_dssp HHHHHTTCC--EEEE---------CSCHHHHHHHHHT--TCC--EEEETTTTSSCTTHHHHHHH----HTCCEEEECCCC
T ss_pred HHhhcCCCE--EEEe---------CCCHHHHHHHHHc--CCC--EEEECCCCCCCHHHHHHHHH----hCCeEEEEcCCC
Confidence 5431 1344 5663 2223333334443 322 245432 2334444433 368999999877
Q ss_pred CccCCccccccCCCCCC-----hhHHHHHHHHHHHcCCe
Q 020275 271 EVWDGRAKKWLPSKCLG-----DGKFESFATRWRDSGAK 304 (328)
Q Consensus 271 ~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~ 304 (328)
...+- +..+....+ .+.+.+.+....+.|+.
T Consensus 135 ~p~tm---~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~ 170 (280)
T 1eye_A 135 VSADT---PHVPVRYGNVVAEVRADLLASVADAVAAGVD 170 (280)
T ss_dssp SCTTC---TTSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcch---hhcCcchhHHHHHHHHHHHHHHHHHHHcCCC
Confidence 43211 111000001 23355566667788874
No 155
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=72.82 E-value=53 Score=29.40 Aligned_cols=145 Identities=14% Similarity=0.057 Sum_probs=77.6
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+ -.. -++.+|-.++.+.+++.+ . . .|+|
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~GttG-E~~-----~Ls~eEr~~v~~~~~~~~-----------------~-g--viaG 71 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGTTG-LGP-----SLSPEEKLENLKAVYDVT-----------------N-K--IIFQ 71 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTT-TGG-----GSCHHHHHHHHHHHHTTC-----------------S-C--EEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHHc-----------------C-C--EEEe
Confidence 45678888888889999955543 322 111 245555555555444321 1 2 5666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC-----CCHHHHHHHHHHHHhcCCCccEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI-----PNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~-----~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
. |.. +.++. .++++...+.|+|.+++=+= |+.+++..-.+.+.+.. ++|++
T Consensus 72 v-g~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~-~lPii 127 (293)
T 1w3i_A 72 V-GGL------------------NLDDA----IRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVS-PHPVY 127 (293)
T ss_dssp C-CCS------------------CHHHH----HHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHC-SSCEE
T ss_pred c-CCC------------------CHHHH----HHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhC-CCCEE
Confidence 4 331 22222 35666777889999877542 56666666666555543 68988
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 206 ICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 206 is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
+==.. +++.-.-+.+...+ .+++.+|=--|.....+..+++
T Consensus 128 lYn~P---~~tg~~l~~~~~~~----~pnIvgiKds~gd~~~~~~~~~ 168 (293)
T 1w3i_A 128 LYNYP---TATGKDIDAKVAKE----IGCFTGVKDTIENIIHTLDYKR 168 (293)
T ss_dssp EEECH---HHHSCCCCHHHHHH----HCCEEEEEECCSCHHHHHHHHH
T ss_pred EEECc---hhhCcCCCHHHHHh----cCCEEEEEeCCCCHHHHHHHHh
Confidence 53211 12111234443333 2455444444444555555554
No 156
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=72.68 E-value=4.9 Score=36.26 Aligned_cols=51 Identities=24% Similarity=0.353 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCC
Q 020275 160 DFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGE 220 (328)
Q Consensus 160 ~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~ 220 (328)
+.-.++++++.++|+|.|++|-+|+. +++.+.+.+ ++|++ .+- -+.-.||.
T Consensus 173 ~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l-----~iP~i-gIG---aG~~cdgQ 223 (275)
T 3vav_A 173 AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTREL-----SIPTI-GIG---AGAECSGQ 223 (275)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHC-----SSCEE-EES---SCSCSSEE
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhC-----CCCEE-EEc---cCCCCCce
Confidence 45566889999999999999999986 777665543 48875 452 24334554
No 157
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=72.58 E-value=35 Score=30.96 Aligned_cols=28 Identities=14% Similarity=0.095 Sum_probs=21.8
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHH
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALV 192 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~ 192 (328)
.++.+.+.|+|.+.++.-.++.|++..+
T Consensus 244 ~l~~l~~~g~d~~~~d~~~dl~~~~~~~ 271 (338)
T 2eja_A 244 FIDLAVDYRADALSVDWSVDIPELFKIY 271 (338)
T ss_dssp HHHHHTTSCCSEEECCTTSCHHHHHHHC
T ss_pred HHHHHHHcCCCEEEeCCCCCHHHHHHhC
Confidence 5566778999999999878888866543
No 158
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=72.09 E-value=16 Score=31.62 Aligned_cols=49 Identities=14% Similarity=0.260 Sum_probs=34.1
Q ss_pred HHHHHHHHhcCCCeEEEec-----CCCHHHHHHHHHHHHhcCCCccEEEEEEecC
Q 020275 163 RRRLQVLVESGPDLLAFET-----IPNKLEAQALVELLEEENIQIPSWICFSSVD 212 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET-----~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~ 212 (328)
.+.++.+.++|+|++-+-- +|++.....+++.+++.. ++|+-+-|-+.+
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~-~~~~~vhlmv~d 73 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-KKTLDVHLMIVE 73 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-CSEEEEEEESSS
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc-CCcEEEEEEccC
Confidence 5678888889999874443 355555456777777754 578888787754
No 159
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=71.96 E-value=7 Score=37.54 Aligned_cols=40 Identities=23% Similarity=0.222 Sum_probs=21.6
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHH
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAE 94 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~ 94 (328)
+.+|+-.+.+++ |-+.|||++.| |+ +..+++.|++.+.++
T Consensus 76 Lk~~eGr~~l~~--Lv~~ADVlien-fr--PGv~~rlGL~ye~L~ 115 (428)
T 1q7e_A 76 TKTAEGKEVMEK--LIREADILVEN-FH--PGAIDHMGFTWEHIQ 115 (428)
T ss_dssp TTSHHHHHHHHH--HHHHCSEEEEC-CC--C-------CCHHHHH
T ss_pred CCCHHHHHHHHH--HHhhCCEEEEc-CC--cchHhhcCCCHHHHH
Confidence 466665444443 44669999999 66 667888899875443
No 160
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=71.90 E-value=32 Score=31.85 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhcC--CCeEEEec-----CCCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 160 DFHRRRLQVLVESG--PDLLAFET-----IPNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
+.+..+++.|.+.| +|.|-+.. .|++.+++..++.+... ++||||| +.+.
T Consensus 201 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~--Glpi~iTEldv~ 258 (356)
T 2dep_A 201 DILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGL--GLDNIITELDMS 258 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT--TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHhC--CCeEEEeeceec
Confidence 45677888887776 59987753 47899999999888766 4999998 4443
No 161
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=71.89 E-value=40 Score=29.76 Aligned_cols=102 Identities=14% Similarity=0.135 Sum_probs=60.6
Q ss_pred HHHHHHHHhcC-CCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 163 RRRLQVLVESG-PDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 163 ~~qi~~l~~~g-vD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
....+.+.+.+ +|++=+|-...-+-...+++.+++. +..+++|+.-.+ .+++-+.+.+.+..+.+ .+++.+=+-
T Consensus 102 ~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~--~~kiI~S~Hdf~--~TP~~~el~~~~~~~~~-~gaDIvKia 176 (258)
T 4h3d_A 102 TTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKK--EVKVIISNHDFN--KTPKKEEIVSRLCRMQE-LGADLPKIA 176 (258)
T ss_dssp HHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESS--CCCCHHHHHHHHHHHHH-TTCSEEEEE
T ss_pred HHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhC--CCEEEEEEecCC--CCCCHHHHHHHHHHHHH-hCCCEEEEE
Confidence 33344444444 9999999877666667777777765 489999997322 23333334444444443 466665555
Q ss_pred CC--ChhhhHHHHHHHH---h-hcCCeEEEEeCC
Q 020275 242 CA--PPQFVENLICYFK---E-LTKKAIVVYPNS 269 (328)
Q Consensus 242 C~--~p~~~~~~l~~l~---~-~~~~pl~~ypN~ 269 (328)
+. +++.+..+++... . +.+.|++.+.=+
T Consensus 177 ~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG 210 (258)
T 4h3d_A 177 VMPQNEKDVLVLLEATNEMFKIYADRPIITMSMS 210 (258)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECT
T ss_pred EccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 54 4666666665432 2 246788776654
No 162
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=71.83 E-value=12 Score=33.02 Aligned_cols=50 Identities=14% Similarity=0.214 Sum_probs=37.5
Q ss_pred HHHHHHHHhcCCCeEEE-----ecCCCHHHHHHHHHHHHhcCCCccEEEEEEecC
Q 020275 163 RRRLQVLVESGPDLLAF-----ETIPNKLEAQALVELLEEENIQIPSWICFSSVD 212 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~-----ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~ 212 (328)
.+.++.+.++|+|++-+ -.+|++..-..+++.+|+...++|+-+-+.+.+
T Consensus 43 ~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~ 97 (246)
T 3inp_A 43 GDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKP 97 (246)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSS
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCC
Confidence 56788888899999877 345777777778888887643688887777654
No 163
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=71.68 E-value=32 Score=33.43 Aligned_cols=66 Identities=17% Similarity=0.155 Sum_probs=42.6
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.++++.|+++|+|+|.+-+- ++.......++.+++.-.++|+++.. ..+.+.+...++ .++++|-+
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~----------v~t~e~a~~l~~--aGaD~I~V 299 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARALIE--AGVSAVKV 299 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEE----------ECSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcc----------cCcHHHHHHHHH--hCCCEEEE
Confidence 56889999999999998754 23344445566666542268998732 234555555444 36788777
No 164
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=71.21 E-value=62 Score=29.57 Aligned_cols=198 Identities=14% Similarity=0.022 Sum_probs=103.8
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+ -.. -++.+|-.++++.+++.+. ++-.+|+|
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTG-E~~-----~Ls~eEr~~vi~~~ve~~~-----------------grvpViaG 109 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTG-IYM-----YLTREERRRAIEAAATILR-----------------GRRTLMAG 109 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe
Confidence 35678888888899999976544 222 111 2455666677666665432 23345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
. |.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 110 v-g~~------------------st~ea----i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~-~lPiil 165 (332)
T 2r8w_A 110 I-GAL------------------RTDEA----VALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT-ALPLAI 165 (332)
T ss_dssp E-CCS------------------SHHHH----HHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred c-CCC------------------CHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 4 331 22332 3466667778999998754 246677666666655543 699884
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChh--h-hHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCC
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQ--F-VENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPS 283 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~--~-~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~ 283 (328)
==. .+++.-.-+.+...+.. +.++ .+||--++.+ . +..+ .++....+..+.+|. +
T Consensus 166 Yn~---P~~tg~~l~~e~~~~La-~~pn--IvgiKdssgd~~~~~~~~-~~l~~~~~~~f~v~~---------------G 223 (332)
T 2r8w_A 166 YNN---PTTTRFTFSDELLVRLA-YIPN--IRAIKMPLPADADYAGEL-ARLRPKLSDDFAIGY---------------S 223 (332)
T ss_dssp ECC---HHHHCCCCCHHHHHHHH-TSTT--EEEEEECCCTTCCHHHHH-HHHTTTSCTTCEEEE---------------C
T ss_pred EeC---ccccCcCCCHHHHHHHH-cCCC--EEEEEeCCCCchhHHHHH-HHHHHhcCCCEEEEe---------------C
Confidence 221 12221223444444443 4445 4555433322 1 2222 233222221222221 1
Q ss_pred CCCChhHHHHHHHHHHHcCC-eEEeecCCCChHHHHHHHHHHh
Q 020275 284 KCLGDGKFESFATRWRDSGA-KLIGGCCRTTPSTIQAVSKVLK 325 (328)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~G~-~iiGGCCGt~P~hI~al~~~l~ 325 (328)
.+. .....+..|+ -+|+|+...-|+...+|-+++.
T Consensus 224 ----~D~---~~l~~l~~G~~G~is~~anv~P~~~~~l~~a~~ 259 (332)
T 2r8w_A 224 ----GDW---GCTDATLAGGDTWYSVVAGLLPVPALQLMRAAQ 259 (332)
T ss_dssp ----CHH---HHHHHHHTTCSEEEESGGGTCHHHHHHHHHHHH
T ss_pred ----chH---HHHHHHHCCCCEEEeCHHHhCHHHHHHHHHHHH
Confidence 111 1223445564 5677777778888887766653
No 165
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=71.09 E-value=62 Score=29.52 Aligned_cols=95 Identities=12% Similarity=0.036 Sum_probs=55.7
Q ss_pred HHHHHHHHHhcCCCeEEEecCCC-HHH--HHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEE
Q 020275 162 HRRRLQVLVESGPDLLAFETIPN-KLE--AQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAV 238 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~-~~E--~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i 238 (328)
....+++..+.|+.+.+ -|+.+ +.+ .....+.+++...+.|+++++.. |.+.......+.. .++++|
T Consensus 75 ~~~~a~aa~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~pv~~~i~~--------~~~~~~~~~~~~~-~gad~i 144 (349)
T 1p0k_A 75 NKSLARAASQAGIPLAV-GSQMSALKDPSERLSYEIVRKENPNGLIFANLGS--------EATAAQAKEAVEM-IGANAL 144 (349)
T ss_dssp HHHHHHHHHHHTCCEEC-CCCTTTTTCHHHHHHHHHHHHHCSSSCEEEEEET--------TCCHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHHHcCCcEEe-ccchhcccCcccccceehhhhhCCCceeEEeecC--------CCCHHHHHHHHHh-cCCCeE
Confidence 34555666778887643 44432 222 22333445544447899988852 4455555555544 357777
Q ss_pred EECCCCh----------h--hhHHHHHHHHhhcCCeEEEE
Q 020275 239 GINCAPP----------Q--FVENLICYFKELTKKAIVVY 266 (328)
Q Consensus 239 GvNC~~p----------~--~~~~~l~~l~~~~~~pl~~y 266 (328)
-+|+..| + .+...++.+++..+.|+++.
T Consensus 145 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK 184 (349)
T 1p0k_A 145 QIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVK 184 (349)
T ss_dssp EEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEE
T ss_pred EecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEE
Confidence 6665533 1 14567788887778899886
No 166
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=70.92 E-value=25 Score=33.33 Aligned_cols=66 Identities=14% Similarity=0.256 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
.++++.++++|||+|.+.|- .+.......++.+++.- +.|+++.-. .+.+++...++ .++++|.+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~g~V----------~t~e~A~~a~~--aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNV----------VTEEATKELIE--NGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC-CCEEEEEEE----------CSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC-CCeEEEeec----------CCHHHHHHHHH--cCCCEEEEe
Confidence 45899999999999998743 33444555666666543 588886311 34566665554 467888774
No 167
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=70.87 E-value=8.7 Score=36.28 Aligned_cols=56 Identities=25% Similarity=0.422 Sum_probs=37.0
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
+.+|+-...+ ++ |-+.|||+++| |+ +..+++.|++.+.++++ ++-+|.
T Consensus 82 Lk~~~Gr~~l-~~-Lv~~ADV~ien-fr--Pg~~~rlGl~ye~L~~~---------------------------nP~LIy 129 (385)
T 4ed9_A 82 FRTEEGRELV-RR-LVAEADVVIEN-FK--LGGLDKYGLDYESLKAI---------------------------NPQLIY 129 (385)
T ss_dssp TTSHHHHHHH-HH-HHHTCSEEEEC-CC--TTTTGGGTCSHHHHHHH---------------------------CTTCEE
T ss_pred CCCHHHHHHH-HH-HHHhCCEEEEC-CC--ccHHHHhCCCHHHHHHh---------------------------CCCeEE
Confidence 4556543333 22 34569999999 66 66788889987544331 356788
Q ss_pred eecCCccc
Q 020275 130 ASIGSYGA 137 (328)
Q Consensus 130 GsiGP~g~ 137 (328)
.||..||.
T Consensus 130 ~sisGfG~ 137 (385)
T 4ed9_A 130 CSITGFGH 137 (385)
T ss_dssp EEEESSCS
T ss_pred EEEEeCCC
Confidence 88877775
No 168
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=70.34 E-value=59 Score=28.97 Aligned_cols=105 Identities=16% Similarity=0.121 Sum_probs=60.6
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+ -.. -++.+|-.++.+.+++.+ . . .|+|
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~GtTG-E~~-----~Ls~eEr~~v~~~~~~~~-----------------~-g--ViaG 71 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGTTG-LGP-----ALSKDEKRQNLNALYDVT-----------------H-K--LIFQ 71 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTT-TGG-----GSCHHHHHHHHHHHTTTC-----------------S-C--EEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHHh-----------------C-C--eEEe
Confidence 45678888888889999966543 222 111 245555555555444321 1 2 5666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC-----CCHHHHHHHHHHHHhcCCCccEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI-----PNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~-----~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
. |.. +.++. .++++...+.|+|.+++=+= |+.+++..-.+.+.+.. ++|++
T Consensus 72 v-g~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~-~lPii 127 (288)
T 2nuw_A 72 V-GSL------------------NLNDV----MELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARIS-SHSLY 127 (288)
T ss_dssp C-CCS------------------CHHHH----HHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHC-CSCEE
T ss_pred e-CCC------------------CHHHH----HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc-CCCEE
Confidence 4 331 22222 44566667789998876542 56666666665555543 68988
Q ss_pred E
Q 020275 206 I 206 (328)
Q Consensus 206 i 206 (328)
+
T Consensus 128 l 128 (288)
T 2nuw_A 128 I 128 (288)
T ss_dssp E
T ss_pred E
Confidence 5
No 169
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=69.94 E-value=11 Score=36.49 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=44.6
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
+..|+-.+.+ ++ |-+.|||+++| |+ +..+++.|++.+.++++ ++-+|.
T Consensus 100 Lk~~eGr~~l-~~-Li~~ADVvven-fR--PG~~erlGL~ye~L~~~---------------------------NP~LIy 147 (456)
T 3ubm_A 100 TKTPEGKAVF-EK-CIKWADILLEN-FR--PGAMERMGFTWEYLQQL---------------------------NPRLIY 147 (456)
T ss_dssp TTSHHHHHHH-HH-HHHHCSEEEEC-CS--TTHHHHTTCCHHHHHHH---------------------------CTTCEE
T ss_pred CCCHHHHHHH-HH-HHHhCCEEEEC-CC--ccHHHHhCCCHHHHHHh---------------------------CCCcEE
Confidence 4556543333 22 23459999999 77 66889999987644331 456888
Q ss_pred eecCCcccCcCCCCCCCCCCCCCCCHHHHHH
Q 020275 130 ASIGSYGAYLADGSEYSGNYGPGVDLEKLKD 160 (328)
Q Consensus 130 GsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~ 160 (328)
.||..||. +|+|.+...++-+.+
T Consensus 148 ~sisGfG~--------~GP~a~rpg~D~~~q 170 (456)
T 3ubm_A 148 GTVKGFGE--------NSPWAGVSAYENVAQ 170 (456)
T ss_dssp EEEESSCT--------TCTTTTSCCCHHHHH
T ss_pred EEEEecCC--------CCCCCCCCCcHHHHH
Confidence 89888875 355544344444433
No 170
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=69.45 E-value=68 Score=29.30 Aligned_cols=160 Identities=15% Similarity=0.162 Sum_probs=84.7
Q ss_pred ceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe---cCCC----------HHHHH--
Q 020275 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE---TIPN----------KLEAQ-- 189 (328)
Q Consensus 125 ~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E---T~~~----------~~E~~-- 189 (328)
+.+|-|-|-+++++..| .| .+.+++ ..+++.+++.|+|+|=+- |-|. .+|++
T Consensus 27 ~~~vMGIlNvTpDSFsd------~~---~~~~~a----l~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv 93 (314)
T 3tr9_A 27 EPAVMGIINVSPNSFYH------PH---LDLNSA----LRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRL 93 (314)
T ss_dssp SCEEEEEEECSTTCSBC------BC---CSHHHH----HHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCchhh------cc---CCHHHH----HHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHH
Confidence 45788888888877654 22 355555 567778888999998654 4442 34533
Q ss_pred -HHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC---hhhhHHHHHHHHhhcCCeEEE
Q 020275 190 -ALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP---PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 190 -a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~---p~~~~~~l~~l~~~~~~pl~~ 265 (328)
.+++++++. ..+.||+. -...+.+-+.++. ++. .||=++ -+.+.+++.+ .+.|+++
T Consensus 94 ~pvI~~l~~~---~~vpISID---------T~~~~Va~aAl~a--Ga~--iINDVsg~~~~~m~~v~a~----~g~~vVl 153 (314)
T 3tr9_A 94 LPVIDAIKKR---FPQLISVD---------TSRPRVMREAVNT--GAD--MINDQRALQLDDALTTVSA----LKTPVCL 153 (314)
T ss_dssp HHHHHHHHHH---CCSEEEEE---------CSCHHHHHHHHHH--TCC--EEEETTTTCSTTHHHHHHH----HTCCEEE
T ss_pred HHHHHHHHhh---CCCeEEEe---------CCCHHHHHHHHHc--CCC--EEEECCCCCchHHHHHHHH----hCCeEEE
Confidence 445555543 24556663 2233333334443 222 244433 2234444443 3679999
Q ss_pred EeCCCCccCCccccccCCCCC---ChhHHHHHHHHHHHcCC---eEE---eec---CCCChHHHHHH
Q 020275 266 YPNSGEVWDGRAKKWLPSKCL---GDGKFESFATRWRDSGA---KLI---GGC---CRTTPSTIQAV 320 (328)
Q Consensus 266 ypN~g~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~G~---~ii---GGC---CGt~P~hI~al 320 (328)
.++.|...+. +..+.... -.+.+.+.+....++|+ +|| |=- -|-+++|=-++
T Consensus 154 Mh~~G~P~tm---q~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~l 217 (314)
T 3tr9_A 154 MHFPSETRKP---GSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYL 217 (314)
T ss_dssp ECCCCTTCCT---TSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHH
T ss_pred ECCCCCCccc---ccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHH
Confidence 9988753211 11010000 01234556667788898 465 322 35667754333
No 171
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=69.17 E-value=63 Score=28.84 Aligned_cols=118 Identities=13% Similarity=0.196 Sum_probs=61.9
Q ss_pred ceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEE---------ecCCCHHHHHHHHHHH
Q 020275 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAF---------ETIPNKLEAQALVELL 195 (328)
Q Consensus 125 ~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~---------ET~~~~~E~~a~~~~~ 195 (328)
+.+|-|-|-=+.+++.||..| .+.+.+ ..+++.+++.|+|+|=+ +.++.-+|+.-++-++
T Consensus 6 r~~iMGIlNvTPDSFsDGG~~-------~~~~~a----~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGKF-------NNVETA----INRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC-----------------CHHHHH----HHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCCC-------CCHHHH----HHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 467888887777777776433 233433 45778888999999854 4566677777776666
Q ss_pred HhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC----ChhhhHHHHHHHHhhcCCeEEEEeCCCC
Q 020275 196 EEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA----PPQFVENLICYFKELTKKAIVVYPNSGE 271 (328)
Q Consensus 196 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~----~p~~~~~~l~~l~~~~~~pl~~ypN~g~ 271 (328)
+... ...+.||+.. ...+-+-..++. ++. -||=+ ....|.+++.. .+.|++++-+.|.
T Consensus 75 ~~l~-~~~v~iSIDT---------~~~~Va~~al~a--Ga~--iINDVs~g~~d~~m~~~va~----~~~~~vlMH~~~~ 136 (270)
T 4hb7_A 75 EAIV-GFDVKISVDT---------FRSEVAEACLKL--GVD--MINDQWAGLYDHRMFQIVAK----YDAEIILMHNGNG 136 (270)
T ss_dssp HHHT-TSSSEEEEEC---------SCHHHHHHHHHH--TCC--EEEETTTTSSCTHHHHHHHH----TTCEEEEECCCSS
T ss_pred HHhh-cCCCeEEEEC---------CCHHHHHHHHHh--ccc--eeccccccccchhHHHHHHH----cCCCeEEeccccC
Confidence 5543 3457778742 222222233333 333 25532 12334444333 3678888776664
No 172
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=68.36 E-value=46 Score=35.36 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=52.9
Q ss_pred HHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCCh----------------hhhHHHHHHHHhh
Q 020275 195 LEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPP----------------QFVENLICYFKEL 258 (328)
Q Consensus 195 ~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p----------------~~~~~~l~~l~~~ 258 (328)
+++...+.|+|+++.+.. +-+.+.++++.+.+ .++++|-+|+..| +.+..+++.+++.
T Consensus 628 ~~~~~~~~~~i~~i~~g~-----~~~~~~~~a~~~~~-~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~ 701 (1025)
T 1gte_A 628 LKADFPDNIVIASIMCSY-----NKNDWMELSRKAEA-SGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA 701 (1025)
T ss_dssp HHHHCTTSEEEEEECCCS-----CHHHHHHHHHHHHH-TTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEEecCCC-----CHHHHHHHHHHHHh-cCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh
Confidence 444322589999885311 11234456665544 4788888887644 3356677888877
Q ss_pred cCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 259 TKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 259 ~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
.+.|++++-... .+++.+.++.+.+.|+..
T Consensus 702 ~~~Pv~vK~~~~-----------------~~~~~~~a~~~~~~G~d~ 731 (1025)
T 1gte_A 702 VQIPFFAKLTPN-----------------VTDIVSIARAAKEGGADG 731 (1025)
T ss_dssp CSSCEEEEECSC-----------------SSCHHHHHHHHHHHTCSE
T ss_pred hCCceEEEeCCC-----------------hHHHHHHHHHHHHcCCCE
Confidence 788998854311 113556666677777643
No 173
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=68.12 E-value=70 Score=28.92 Aligned_cols=135 Identities=12% Similarity=0.110 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhcCCCeE-EEecC---CCHHHHH--------HHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 161 FHRRRLQVLVESGPDLL-AFETI---PNKLEAQ--------ALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i-~~ET~---~~~~E~~--------a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
...+.++.+.++|+|.+ +++.. -+...-+ .+++.+++.+ +.|++ -|++ |. ...+..
T Consensus 180 ~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~-g~~~i-~~~~--------g~--~~~l~~ 247 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDFS-DTPVI-YFFR--------GS--SSFIDL 247 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHC-CCCEE-EEES--------SH--HHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhcC-CCCEE-EEcC--------Cc--HHHHHH
Confidence 33444566667999987 56654 3444433 3456666552 47754 4542 33 345566
Q ss_pred HHhcCCceEEEECCC-ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc-CC---
Q 020275 229 INKSGKVNAVGINCA-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS-GA--- 303 (328)
Q Consensus 229 ~~~~~~~~~iGvNC~-~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~--- 303 (328)
+.+ .++++++++-. .+. .+.+.+ -+.++.|- |+ ..+. -++++..+.+++.++. |.
T Consensus 248 l~~-~g~d~~~~d~~~dl~---~~~~~~------~~~l~Gn~----dp---~~l~---gt~e~i~~~v~~~l~~~g~~~g 307 (338)
T 2eja_A 248 AVD-YRADALSVDWSVDIP---ELFKIY------DKGFQGNL----EP---AVLY---ASEEVIEEKTLGLLRRIPVKTR 307 (338)
T ss_dssp HTT-SCCSEEECCTTSCHH---HHHHHC------CSEEECCB----CG---GGGG---SCHHHHHHHHHHHHTTCCCSSS
T ss_pred HHH-cCCCEEEeCCCCCHH---HHHHhC------CeEEEECC----CH---HHhc---CCHHHHHHHHHHHHHHhCCCCC
Confidence 655 47888888754 332 222222 23455552 22 1222 2688899999999876 65
Q ss_pred eEEeecCC----CChHHHHHHHHHHhcC
Q 020275 304 KLIGGCCR----TTPSTIQAVSKVLKER 327 (328)
Q Consensus 304 ~iiGGCCG----t~P~hI~al~~~l~~~ 327 (328)
-|++--|| |.|++++++.+++++.
T Consensus 308 ~I~~~g~gi~~~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 308 YVFNLGHGLAPDMELEKVKYLVDLVKSF 335 (338)
T ss_dssp EEBCBSSCCCTTSCHHHHHHHHHHHHTC
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 57777776 6889999999998764
No 174
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=67.76 E-value=39 Score=28.90 Aligned_cols=138 Identities=13% Similarity=0.143 Sum_probs=69.9
Q ss_pred HHHHHHHHhcCCCeEEEecC-----CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceE
Q 020275 163 RRRLQVLVESGPDLLAFETI-----PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNA 237 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-----~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 237 (328)
.+.++.+.++|+|.|-+-++ +.... ..++.+++.. ++|+++..-+ .+.+++-..+. .+++.
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~-~ipv~v~ggI---------~~~~~~~~~l~--~Gad~ 100 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAM-DIKVELSGGI---------RDDDTLAAALA--TGCTR 100 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHC-SSEEEEESSC---------CSHHHHHHHHH--TTCSE
T ss_pred HHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhc-CCcEEEECCc---------CCHHHHHHHHH--cCCCE
Confidence 44567788899999977432 22222 3333444432 6898874322 23455444443 35777
Q ss_pred EEECCC---ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEe-------
Q 020275 238 VGINCA---PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIG------- 307 (328)
Q Consensus 238 iGvNC~---~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiG------- 307 (328)
|.+.-. .|+.+..+++.+.. ...+.+-+..|.+. ...|.... . ...+.++++.+.|+..|.
T Consensus 101 V~lg~~~l~~p~~~~~~~~~~g~--~~~~~l~~~~g~v~---~~g~~~~~---~-~~~e~~~~~~~~G~~~i~~~~~~~~ 171 (244)
T 1vzw_A 101 VNLGTAALETPEWVAKVIAEHGD--KIAVGLDVRGTTLR---GRGWTRDG---G-DLYETLDRLNKEGCARYVVTDIAKD 171 (244)
T ss_dssp EEECHHHHHCHHHHHHHHHHHGG--GEEEEEEEETTEEC---CSSSCCCC---C-BHHHHHHHHHHTTCCCEEEEEC---
T ss_pred EEECchHhhCHHHHHHHHHHcCC--cEEEEEEccCCEEE---EcCcccCC---C-CHHHHHHHHHhCCCCEEEEeccCcc
Confidence 777653 46666666665532 22344544433221 23454321 2 334445555566764322
Q ss_pred e-cCCCChHHHHHHHHH
Q 020275 308 G-CCRTTPSTIQAVSKV 323 (328)
Q Consensus 308 G-CCGt~P~hI~al~~~ 323 (328)
| --|.+.+.++.+++.
T Consensus 172 ~~~~g~~~~~~~~i~~~ 188 (244)
T 1vzw_A 172 GTLQGPNLELLKNVCAA 188 (244)
T ss_dssp ----CCCHHHHHHHHHT
T ss_pred cccCCCCHHHHHHHHHh
Confidence 1 134455666666654
No 175
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=67.57 E-value=58 Score=27.86 Aligned_cols=90 Identities=20% Similarity=0.263 Sum_probs=54.5
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhc-CCceEEEEC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKS-GKVNAVGIN 241 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~-~~~~~iGvN 241 (328)
.+.++.+.+.|+|.+.+-+++. .+.+.+++.+++.+ ..+++.++. .++ .+.+..+... .+...+ +.
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~-~~~~~~~~~~~~~g--~~~~~~i~~--------~t~-~e~~~~~~~~~d~~i~~-~~ 164 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPV-FHAKEFTEIAREEG--IKTVFLAAP--------NTP-DERLKVIDDMTTGFVYL-VS 164 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGHHHHHHHHHHHT--CEEEEEECT--------TCC-HHHHHHHHHHCSSEEEE-EC
T ss_pred HHHHHHHHHCCCCEEEECCCCh-hhHHHHHHHHHHhC--CCeEEEECC--------CCH-HHHHHHHHhcCCCeEEE-EE
Confidence 4578888899999999988765 56777888888875 666666531 233 3455444332 122222 22
Q ss_pred CC---C-----hhhhHHHHHHHHhhcCCeEEE
Q 020275 242 CA---P-----PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 242 C~---~-----p~~~~~~l~~l~~~~~~pl~~ 265 (328)
.. . +......++++++..+.|+++
T Consensus 165 ~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~ 196 (248)
T 1geq_A 165 LYGTTGAREEIPKTAYDLLRRAKRICRNKVAV 196 (248)
T ss_dssp CC-------CCCHHHHHHHHHHHHHCSSCEEE
T ss_pred CCccCCCCCCCChhHHHHHHHHHhhcCCCEEE
Confidence 11 1 123456777887776667544
No 176
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=67.49 E-value=28 Score=32.35 Aligned_cols=146 Identities=14% Similarity=0.160 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEec--CC-CHHHH-HHHHHHHHhcCCCccEEEEEE-ecCCC---------CCCCC-
Q 020275 155 LEKLKDFHRRRLQVLVESGPDLLAFET--IP-NKLEA-QALVELLEEENIQIPSWICFS-SVDGE---------NAPSG- 219 (328)
Q Consensus 155 ~~e~~~~h~~qi~~l~~~gvD~i~~ET--~~-~~~E~-~a~~~~~~~~~~~~pv~is~~-~~~~~---------~l~~G- 219 (328)
..++...|++-++.|.++|+|+|-+.- +. ...+. ..++++++..-.++|.-+.+. |.... ...+.
T Consensus 166 ~~dlA~a~~~ei~~l~~aG~~~IQiDeP~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~~ 245 (357)
T 3rpd_A 166 AWEFAKILNEEAKELEAAGVDIIQFDEPAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSEW 245 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECGGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCcccccccccccc
Confidence 356788999999999999999886542 11 12332 344566655322355444443 32210 11111
Q ss_pred CCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHH
Q 020275 220 ESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWR 299 (328)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (328)
....+.+..+.+ .+++++.+.+..+..-..+++.+. ++-+++ | ++|... .++ -+++++.+.+++.+
T Consensus 246 g~y~~i~~~l~~-~~~D~i~lE~~~~r~~~e~l~~~~---~k~v~l----G-vvd~~s-~~v----e~~eev~~ri~~a~ 311 (357)
T 3rpd_A 246 RQYEEVFPKLQK-SNIDIISLECHNSHVPMELLELIR---GKKVMV----G-AIDVAT-DTI----ETAEEVADTLRKAL 311 (357)
T ss_dssp CGGGGTHHHHHH-SSCCEEEECCTTCCCCGGGGGGGT---TSEEEE----E-CSCTTC-SSC----CCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHh-CCCCEEEEEecCCCCChHHHHhcC---CCEEEe----c-cccCcC-CCC----CCHHHHHHHHHHHH
Confidence 234566666655 578999999975321112333332 232221 1 122211 122 25888998888877
Q ss_pred Hc-CCe--EEeecCCCCh
Q 020275 300 DS-GAK--LIGGCCRTTP 314 (328)
Q Consensus 300 ~~-G~~--iiGGCCGt~P 314 (328)
+. |.. +|.=.||..+
T Consensus 312 ~~v~~~~l~lsPdCGl~~ 329 (357)
T 3rpd_A 312 KFVDADKLYPCTNCGMTP 329 (357)
T ss_dssp TTSCGGGEEEECSSCCTT
T ss_pred HhCCcccEEEeCCCCCCC
Confidence 64 654 8999999743
No 177
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=67.46 E-value=77 Score=29.17 Aligned_cols=128 Identities=16% Similarity=0.236 Sum_probs=77.2
Q ss_pred HHHHHhcCCCeEEEecCCC-----------HHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCC----------HHH
Q 020275 166 LQVLVESGPDLLAFETIPN-----------KLEAQALVELLEEENIQIPSWICFSSVDGENAPSGES----------FKE 224 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~-----------~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~----------~~~ 224 (328)
++.+.+.|+|.+-+=-... +..+..+.+.+++.+ +|+++-+...+... .+-.+ +..
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~G--iPlllEil~y~~~~-~~~~~~~~a~~~p~~V~~ 192 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAED--IPFFLEILTYDETI-SNNSSVEFAKVKVHKVND 192 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEECBTTB-SCTTSHHHHTTHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcC--CceEEEEeccCCCC-CCCcchhhhccCHHHHHH
Confidence 4445567999864433332 223444556666664 99998776543321 12122 444
Q ss_pred HHHHHH-hcCCceEEEECCCC-hhhh------------H---HHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCC
Q 020275 225 CLDIIN-KSGKVNAVGINCAP-PQFV------------E---NLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLG 287 (328)
Q Consensus 225 ~~~~~~-~~~~~~~iGvNC~~-p~~~------------~---~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~ 287 (328)
+++... ...+++.+=++.+. ++.+ . ...+++...++.|+++-. +| .+
T Consensus 193 a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~ls-gG---------------~~ 256 (332)
T 3iv3_A 193 AMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLS-AG---------------VS 256 (332)
T ss_dssp HHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEEC-TT---------------CC
T ss_pred HHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEEC-CC---------------CC
Confidence 555442 12488999999874 5422 2 335555566678876522 22 24
Q ss_pred hhHHHHHHHHHHHcCCeEEeecCCC
Q 020275 288 DGKFESFATRWRDSGAKLIGGCCRT 312 (328)
Q Consensus 288 ~~~~~~~~~~~~~~G~~iiGGCCGt 312 (328)
.++|.+.++...+.|+.+-|=+||=
T Consensus 257 ~~~fl~~v~~A~~aGa~f~Gv~~GR 281 (332)
T 3iv3_A 257 AELFQETLVFAHKAGAKFNGVLCGR 281 (332)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEECH
T ss_pred HHHHHHHHHHHHHcCCCcceEEeeH
Confidence 6689999988999999888999983
No 178
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=67.44 E-value=27 Score=32.51 Aligned_cols=68 Identities=9% Similarity=-0.079 Sum_probs=33.5
Q ss_pred HHHHHHHHhhcC-CeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE---EeecCCCChHHHHHHHHHH
Q 020275 249 ENLICYFKELTK-KAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL---IGGCCRTTPSTIQAVSKVL 324 (328)
Q Consensus 249 ~~~l~~l~~~~~-~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i---iGGCCGt~P~hI~al~~~l 324 (328)
..+++.+++..+ .|+++.-+....+++. .. ..+.+++.++++.+.+.|+.+ .+|. .+++.++.|++.+
T Consensus 207 ~eiv~aVr~~vg~~~v~vRls~~~~~~g~-----~~-~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~~ 278 (362)
T 4ab4_A 207 LEVTDAAIEVWGAQRVGVHLAPRADAHDM-----GD-ADRAETFTYVARELGKRGIAFICSRERE--ADDSIGPLIKEAF 278 (362)
T ss_dssp HHHHHHHHHHHCGGGEEEEECTTCCSSSC-----CC-TTHHHHHHHHHHHHHHTTCSEEEEECCC--CTTCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEeecccccccc-----CC-CCcHHHHHHHHHHHHHhCCCEEEECCCC--CCHHHHHHHHHHC
Confidence 444555555543 2777766654221110 00 011345667777777777643 3443 2345566666654
No 179
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=67.36 E-value=73 Score=28.87 Aligned_cols=153 Identities=14% Similarity=0.065 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeec
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASI 132 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsi 132 (328)
.+.+++.-+.++++|+|-|..+=-..-.. -++.+|-.++.+.+++.+. ++-.+|+|.
T Consensus 42 ~~~l~~li~~li~~Gv~Gl~v~GtTGE~~-----~Ls~~Er~~v~~~~v~~~~-----------------grvpViaGv- 98 (315)
T 3si9_A 42 EKAFCNFVEWQITQGINGVSPVGTTGESP-----TLTHEEHKRIIELCVEQVA-----------------KRVPVVAGA- 98 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEECSSTTTTGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSCBEEEC-
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCcc-----ccCHHHHHHHHHHHHHHhC-----------------CCCcEEEeC-
Confidence 56788888888899999776442211111 3455666677666665442 233456663
Q ss_pred CCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 133 GSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 133 GP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++==
T Consensus 99 g~~------------------st~~a----i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn 155 (315)
T 3si9_A 99 GSN------------------STSEA----VELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI-SIPIIIYN 155 (315)
T ss_dssp CCS------------------SHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred CCC------------------CHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC-CCCEEEEe
Confidence 321 22332 4566677789999998764 356667666666665554 79998643
Q ss_pred EecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHH
Q 020275 209 SSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICY 254 (328)
Q Consensus 209 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~ 254 (328)
.. +++.-.-+.+...+..++.+++.+|=-.|.....+..+++.
T Consensus 156 ~P---~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~l~~~ 198 (315)
T 3si9_A 156 IP---SRSVIDMAVETMRDLCRDFKNIIGVKDATGKIERASEQREK 198 (315)
T ss_dssp CH---HHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHHHH
T ss_pred Cc---hhhCCCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHH
Confidence 21 22222334554444443245554444444445555555444
No 180
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=67.04 E-value=47 Score=29.24 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=59.4
Q ss_pred HHHHHHHHHhcC-CCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 162 HRRRLQVLVESG-PDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 162 h~~qi~~l~~~g-vD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
|.+.++..++.| +|++=+|-...- ..+.+++.+++. +..+++|+.-.+ .+++-+.+.+.+..+.+ .+++.+=+
T Consensus 102 ~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~--~~kvI~S~Hdf~--~tP~~~el~~~~~~~~~-~gaDivKi 175 (257)
T 2yr1_A 102 VRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEEC--SVWLVVSRHYFD--GTPRKETLLADMRQAER-YGADIAKV 175 (257)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHT--TCEEEEEEEESS--CCCCHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhC--CCEEEEEecCCC--CCcCHHHHHHHHHHHHh-cCCCEEEE
Confidence 344444555567 999999965433 666667766655 488999997422 22232223333333333 46666555
Q ss_pred CCC--ChhhhHHHHHHH---HhhcCCeEEEEeCC
Q 020275 241 NCA--PPQFVENLICYF---KELTKKAIVVYPNS 269 (328)
Q Consensus 241 NC~--~p~~~~~~l~~l---~~~~~~pl~~ypN~ 269 (328)
-+. +++....+++.. +...+.|++.+.-+
T Consensus 176 a~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 176 AVMPKSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred EeccCCHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 554 466666666543 33456799888665
No 181
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=66.92 E-value=33 Score=29.90 Aligned_cols=102 Identities=10% Similarity=0.009 Sum_probs=63.8
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
.+|++...++|+|++.. |... ..+++++++.+ +|++..+ .+++|+...++ .+++.|.+==
T Consensus 96 ~~~a~~Ai~AGA~fIvs---P~~~--~~vi~~~~~~g--i~~ipGv-----------~TptEi~~A~~--~Gad~vK~FP 155 (232)
T 4e38_A 96 GEQALAAKEAGATFVVS---PGFN--PNTVRACQEIG--IDIVPGV-----------NNPSTVEAALE--MGLTTLKFFP 155 (232)
T ss_dssp HHHHHHHHHHTCSEEEC---SSCC--HHHHHHHHHHT--CEEECEE-----------CSHHHHHHHHH--TTCCEEEECS
T ss_pred HHHHHHHHHcCCCEEEe---CCCC--HHHHHHHHHcC--CCEEcCC-----------CCHHHHHHHHH--cCCCEEEECc
Confidence 56888899999999984 4332 33556666664 8888543 26788888775 4688888832
Q ss_pred CChhhhHHHHHHHHhhc-CCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 243 APPQFVENLICYFKELT-KKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 243 ~~p~~~~~~l~~l~~~~-~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
+.+..-...|+.++.-. +.|++ |=+| ++++ .+.+|++.|+..
T Consensus 156 a~~~gG~~~lkal~~p~p~ip~~--ptGG---------------I~~~----n~~~~l~aGa~~ 198 (232)
T 4e38_A 156 AEASGGISMVKSLVGPYGDIRLM--PTGG---------------ITPS----NIDNYLAIPQVL 198 (232)
T ss_dssp TTTTTHHHHHHHHHTTCTTCEEE--EBSS---------------CCTT----THHHHHTSTTBC
T ss_pred CccccCHHHHHHHHHHhcCCCee--eEcC---------------CCHH----HHHHHHHCCCeE
Confidence 22211257788877543 34543 5444 2343 356688888743
No 182
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=66.70 E-value=83 Score=29.30 Aligned_cols=135 Identities=14% Similarity=0.028 Sum_probs=75.8
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+++-|++ -+++|+++|.... .+|.......+.+.++.-+....+++.|++. +....|..|
T Consensus 76 ~~~di~~----a~~~g~~~v~i~~-~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~---------------g~~~~v~~~ 135 (382)
T 2ztj_A 76 RLDAAKV----AVETGVQGIDLLF-GTSKYLRAPHGRDIPRIIEEAKEVIAYIREA---------------APHVEVRFS 135 (382)
T ss_dssp CHHHHHH----HHHTTCSEEEEEE-CC--------CCCHHHHHHHHHHHHHHHHHH---------------CTTSEEEEE
T ss_pred ChhhHHH----HHHcCCCEEEEEe-ccCHHHHHHhCCCHHHHHHHHHHHHHHHHHc---------------CCCEEEEEE
Confidence 4555543 4578999877543 3333222344677665555566666666543 212344444
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-cC--CCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-TI--PNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
+- ++. . .+. +++.+.++.+.+. +|.|.+- |+ ..+.++..+++.+++.- +.++-|+|
T Consensus 136 ~e-------d~~----~----~~~----~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~~~i~~ 194 (382)
T 2ztj_A 136 AE-------DTF----R----SEE----QDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVV-GPRVDIEF 194 (382)
T ss_dssp ET-------TTT----T----SCH----HHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHH-TTTSEEEE
T ss_pred EE-------eCC----C----CCH----HHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhc-CCCCeEEE
Confidence 31 111 1 132 4567788888888 9998664 43 46789899999888750 02344788
Q ss_pred EecCCCCCCCCCCHHHHHHHHHh
Q 020275 209 SSVDGENAPSGESFKECLDIINK 231 (328)
Q Consensus 209 ~~~~~~~l~~G~~~~~~~~~~~~ 231 (328)
.+=++. |..+..++..+..
T Consensus 195 H~Hnd~----GlAvAN~laAv~a 213 (382)
T 2ztj_A 195 HGHNDT----GCAIANAYEAIEA 213 (382)
T ss_dssp EEBCTT----SCHHHHHHHHHHT
T ss_pred EeCCCc----cHHHHHHHHHHHh
Confidence 775553 5566666665543
No 183
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=66.63 E-value=42 Score=30.83 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhcC--CCeEEEec-----CCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 160 DFHRRRLQVLVESG--PDLLAFET-----IPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
+.+..+++.|.+.| +|.|-+.. .|+..+++.+++.+...+ +||+||=.
T Consensus 187 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lG--l~v~iTEl 241 (331)
T 3emz_A 187 EKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLD--VQLHVTEL 241 (331)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTS--CEEEEEEE
T ss_pred HHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHcC--CcEEEeec
Confidence 45567889898877 59997763 478899999999988775 99999854
No 184
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=66.62 E-value=28 Score=31.47 Aligned_cols=159 Identities=13% Similarity=0.029 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeE-----EEecCC--CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLL-----AFETIP--NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL 226 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i-----~~ET~~--~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 226 (328)
+.+.+.+|.+..++.+.+ -|.++ +||.+. -+.+++..++.+++. +.+|++=+.+-|= |.+...++
T Consensus 41 ~~~~l~~f~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~--g~~VflDlK~~DI-----pnTv~~~a 112 (290)
T 3r89_A 41 VSEALFSYNKEIIDQTYD-VCAIYKLQIAYYESYGIEGMIAYRDTLSYLREK--DLLSIGDVKRSDI-----AASAKMYA 112 (290)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHT--TCCEEEEEEECCC-----HHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-cceEEEecHHHHHhcCHHHHHHHHHHHHHHHHC--CCeEEEEecccCc-----HHHHHHHH
Confidence 467888999999998853 44443 233221 123555566777766 4899988876432 33455555
Q ss_pred HHHHhc-CCceEEEECCC-ChhhhHHHHHHHHhhcCCeE--EEEeCCC--CccCCccccccCCCCCChhHHHHHHHHHHH
Q 020275 227 DIINKS-GKVNAVGINCA-PPQFVENLICYFKELTKKAI--VVYPNSG--EVWDGRAKKWLPSKCLGDGKFESFATRWRD 300 (328)
Q Consensus 227 ~~~~~~-~~~~~iGvNC~-~p~~~~~~l~~l~~~~~~pl--~~ypN~g--~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (328)
+.+.+. .+++++-++.. ..+-+.++++...+.....+ ...-|.| .+.+.. ... ..-.+..++.+.+|..
T Consensus 113 ~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgv~vL~~tSn~g~~d~q~~~----~~~-g~l~~~V~~~a~~~~~ 187 (290)
T 3r89_A 113 KAHFEGDFETDFITLNPYMGMDSIEPYEEYIEKGDKGVFVLLRTSNPGAKDFEVLP----VDG-EEFFYKVGDKMRELNE 187 (290)
T ss_dssp HHHHSGGGCCSEEEECCTTCGGGTGGGHHHHHTTSCEEEEEEECCSGGGGTTTTCE----ETT-EETHHHHHHHHHHHHG
T ss_pred HHHhccccCCCEEEEcccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCHHHHhhcc----cCC-CCHHHHHHHHHHHHhh
Confidence 554331 46889999986 47778888877765433332 3333433 111100 000 0012346667777754
Q ss_pred c--C---CeEEeecCCC-ChHHHHHHHHHHh
Q 020275 301 S--G---AKLIGGCCRT-TPSTIQAVSKVLK 325 (328)
Q Consensus 301 ~--G---~~iiGGCCGt-~P~hI~al~~~l~ 325 (328)
. | ...+|-=||. -|+.++.||+.+.
T Consensus 188 ~~~g~~~~g~~GvVvgAT~p~e~~~iR~~~~ 218 (290)
T 3r89_A 188 KYIGKSGFGPIGLVVGATHSEEVEKIRKRYD 218 (290)
T ss_dssp GGCCTTSCEEEEEEECCCCHHHHHHHHHHTT
T ss_pred hccCCCCCCceEEEECCCChHHHHHHHHhCC
Confidence 2 3 2357777774 5999999998753
No 185
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=66.61 E-value=29 Score=32.35 Aligned_cols=69 Identities=6% Similarity=-0.115 Sum_probs=34.7
Q ss_pred hHHHHHHHHhhcC-CeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE---EeecCCCChHHHHHHHHH
Q 020275 248 VENLICYFKELTK-KAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL---IGGCCRTTPSTIQAVSKV 323 (328)
Q Consensus 248 ~~~~l~~l~~~~~-~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i---iGGCCGt~P~hI~al~~~ 323 (328)
+..+++.+++... .||++.-+....+++ +.. ..+.+++.++++.+.+.|+.+ .+|. .+++.++.|++.
T Consensus 214 ~~evv~aVr~~vg~~~v~vRls~~~~~~g----~~~--~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~ 285 (361)
T 3gka_A 214 LLEVVDAAIDVWSAARVGVHLAPRGDAHT----MGD--SDPAATFGHVARELGRRRIAFLFARESF--GGDAIGQQLKAA 285 (361)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECTTCCSSS----CCC--SCHHHHHHHHHHHHHHTTCSEEEEECCC--STTCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEecccccccCC----CCC--CCcHHHHHHHHHHHHHcCCCEEEECCCC--CCHHHHHHHHHH
Confidence 3445555555543 277776664321111 000 012345677777777777644 3433 234556666665
Q ss_pred H
Q 020275 324 L 324 (328)
Q Consensus 324 l 324 (328)
+
T Consensus 286 ~ 286 (361)
T 3gka_A 286 F 286 (361)
T ss_dssp H
T ss_pred c
Confidence 4
No 186
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=66.45 E-value=69 Score=28.23 Aligned_cols=97 Identities=8% Similarity=0.035 Sum_probs=56.6
Q ss_pred HHHHHHHHhcCCCeEEEecCC--------CHHHHHHHHHHHHhc----CCCccEEEEEEecCC--CCCCCCCCHHHHHHH
Q 020275 163 RRRLQVLVESGPDLLAFETIP--------NKLEAQALVELLEEE----NIQIPSWICFSSVDG--ENAPSGESFKECLDI 228 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~--------~~~E~~a~~~~~~~~----~~~~pv~is~~~~~~--~~l~~G~~~~~~~~~ 228 (328)
.+-++.|.++|++.+-+|-.. +..|...-++++++. + .|++|.-..+.. ++-...+.++++++.
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g--~~~~v~aRtd~~~~g~~~~~~~~~~ai~r 173 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAG--VDVVINGRTDAVKLGADVFEDPMVEAIKR 173 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECHHHHCTTTSSSHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcC--CCeEEEEEechhhccCCcchHHHHHHHHH
Confidence 345667778999999999763 334555555555443 4 787776655431 111011236676654
Q ss_pred HHh--cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEE
Q 020275 229 INK--SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 229 ~~~--~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ 265 (328)
... ..++++|=+-|.. ++ .++++.+..+.|+.+
T Consensus 174 a~a~~eAGAd~i~~e~~~~~~----~~~~i~~~~~~P~n~ 209 (255)
T 2qiw_A 174 IKLMEQAGARSVYPVGLSTAE----QVERLVDAVSVPVNI 209 (255)
T ss_dssp HHHHHHHTCSEEEECCCCSHH----HHHHHHTTCSSCBEE
T ss_pred HHHHHHcCCcEEEEcCCCCHH----HHHHHHHhCCCCEEE
Confidence 422 2478999999974 34 444455555677643
No 187
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=66.41 E-value=74 Score=28.56 Aligned_cols=151 Identities=13% Similarity=0.127 Sum_probs=82.9
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+ -.. -++.+|-.++.+.+++.+. ++-.+|+|
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTG-E~~-----~Ls~eEr~~v~~~~~~~~~-----------------grvpViaG 87 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTG-ESP-----TLTSEEKVALYRHVVSVVD-----------------KRVPVIAG 87 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHHhC-----------------CCceEEeC
Confidence 35678888888899999966543 222 111 2455666677666665432 23345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
. |.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 88 v-g~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiil 143 (301)
T 1xky_A 88 T-GSN------------------NTHAS----IDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST-PLPVML 143 (301)
T ss_dssp C-CCS------------------CHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC-SSCEEE
T ss_pred C-CCC------------------CHHHH----HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 4 331 22332 4466667788999987754 246677666666655543 799885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
==. .+++.-.-+.+...+.. +.+++.+|=-.|.....+..+++
T Consensus 144 Yn~---P~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~ 186 (301)
T 1xky_A 144 YNV---PGRSIVQISVDTVVRLS-EIENIVAIKDAGGDVLTMTEIIE 186 (301)
T ss_dssp EEC---HHHHSSCCCHHHHHHHH-TSTTEEEEEECSSCHHHHHHHHH
T ss_pred EeC---ccccCCCCCHHHHHHHH-cCCCEEEEEcCCCCHHHHHHHHH
Confidence 321 12221223444444443 44454444444444444444443
No 188
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=66.40 E-value=79 Score=28.92 Aligned_cols=223 Identities=13% Similarity=0.156 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe--
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA-- 130 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG-- 130 (328)
.|.+.+.-++-++.|-.-|..+-.-.+........+++ .-++.+|++..+++. .+.+|..
T Consensus 63 id~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~---~g~v~rair~iK~~~---------------p~l~vitDv 124 (328)
T 1w1z_A 63 IDRAVEECKELYDLGIQGIDLFGIPEQKTEDGSEAYND---NGILQQAIRAIKKAV---------------PELCIMTDV 124 (328)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECCSSCCSSCGGGGCT---TSHHHHHHHHHHHHS---------------TTSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCccccccCCC---CChHHHHHHHHHHHC---------------CCeEEEEee
Confidence 36677777888999988665433211111110001111 247778887777653 2244444
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCC-CccEEEEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENI-QIPSWICFS 209 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~-~~pv~is~~ 209 (328)
|+-||-..-++|--..| .+.-++-.+...+|+-..+++|+|++.==-|-+- .+.+|.+++.+.+. +.|++ |-+
T Consensus 125 cLc~YT~HGHcGil~~g----~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v~Im-sYs 198 (328)
T 1w1z_A 125 ALDPFTPFGHDGLVKDG----IILNDETVEVLQKMAVSHAEAGADFVSPSDMMDG-RIGAIREALDETDHSDVGIL-SYA 198 (328)
T ss_dssp CSTTTSTTSCSSEESSS----CEEHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTSEEE-EEE
T ss_pred ecccCCCCCceeeccCC----cCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCCceee-ehh
Confidence 45566544333221111 2556777778888888889999999997666664 56778888887653 35554 554
Q ss_pred ecCC-------------------C---CCCCCCCHHHHHHHHH--hcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEE
Q 020275 210 SVDG-------------------E---NAPSGESFKECLDIIN--KSGKVNAVGINCAPPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 210 ~~~~-------------------~---~l~~G~~~~~~~~~~~--~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
.+=- . .+..+.+ .++++.+. -..+.+.+.|-=..| .+.+++.+++.++.|+.+
T Consensus 199 aKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~-~EAlrE~~~Di~EGAD~vMVKPal~--YLDIir~vk~~~~~P~aa 275 (328)
T 1w1z_A 199 AKYASSFYGPFRDALHSAPQFGDKSTYQMNPANT-EEAMKEVELDIVEGADIVMVKPGLA--YLDIVWRTKERFDVPVAI 275 (328)
T ss_dssp EEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCS-HHHHHHHHHHHHHTCSEEEEESCGG--GHHHHHHHHHHHCSCEEE
T ss_pred HHHhhhccchHHHHhccCCCCCCccccCCCCCCH-HHHHHHHHhhHHhCCCEEEEcCCCc--hHHHHHHHHHhcCCCEEE
Confidence 3211 0 1222222 34444331 123678888876544 457778888888999999
Q ss_pred EeCCCCc---cCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 266 YPNSGEV---WDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 266 ypN~g~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
|--+|+- .-...+.|+.. ...+.|....++.+|+.+|
T Consensus 276 YqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~I 315 (328)
T 1w1z_A 276 YHVSGEYAMVKAAAAKGWIDE----DRVMMESLLCMKRAGADII 315 (328)
T ss_dssp EECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHHTCSEE
T ss_pred EEccHHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 9999851 11223446431 2347777888899999876
No 189
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=66.26 E-value=26 Score=30.60 Aligned_cols=26 Identities=31% Similarity=0.367 Sum_probs=23.3
Q ss_pred ChHHHHHHHHHHHHhccceeecCC-cC
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSS-YQ 77 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnT-y~ 77 (328)
.+|.++++-+--.+||||.|.|+| |.
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 678888888889999999999999 75
No 190
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=66.14 E-value=68 Score=28.39 Aligned_cols=83 Identities=16% Similarity=0.213 Sum_probs=48.5
Q ss_pred CccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCCh-------------hhhHHHHHHHHhhcCCeEEEEe
Q 020275 201 QIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPP-------------QFVENLICYFKELTKKAIVVYP 267 (328)
Q Consensus 201 ~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p-------------~~~~~~l~~l~~~~~~pl~~yp 267 (328)
+.|+++++... +-+.+.++++.+.+..++++|=+|+..| ..+..+++.+++..+.|+++.-
T Consensus 98 ~~p~~v~l~~~------~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~ 171 (311)
T 1ep3_A 98 ELPIIANVAGS------EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKL 171 (311)
T ss_dssp TSCEEEEECCS------SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCcEEEEEcCC------CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 58999998532 1122344454444214688887776533 3347788888877778887754
Q ss_pred CCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 268 NSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 268 N~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
..+ | .++.++++.+.+.|+..|
T Consensus 172 ~~~---------~--------~~~~~~a~~l~~~G~d~i 193 (311)
T 1ep3_A 172 SPN---------V--------TDIVPIAKAVEAAGADGL 193 (311)
T ss_dssp CSC---------S--------SCSHHHHHHHHHTTCSEE
T ss_pred CCC---------h--------HHHHHHHHHHHHcCCCEE
Confidence 321 1 123445566777787543
No 191
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=65.96 E-value=32 Score=32.19 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=7.3
Q ss_pred hccceeecCCcCCCh
Q 020275 66 AGADILVTSSYQATI 80 (328)
Q Consensus 66 AGAdiI~TnTy~as~ 80 (328)
||+.+|+|=--..++
T Consensus 53 A~~GLiitE~~~v~~ 67 (377)
T 2r14_A 53 ASAGLIISEATNISP 67 (377)
T ss_dssp TTSSCEEEEEEESSG
T ss_pred hcCCEEEEcceeecc
Confidence 456655553333343
No 192
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=65.80 E-value=84 Score=30.06 Aligned_cols=99 Identities=14% Similarity=0.188 Sum_probs=55.3
Q ss_pred Ccc-EEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC-C--hh------------------hhHHHHHHHHhh
Q 020275 201 QIP-SWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA-P--PQ------------------FVENLICYFKEL 258 (328)
Q Consensus 201 ~~p-v~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~-~--p~------------------~~~~~l~~l~~~ 258 (328)
++| +++-++..- +-+.+.+.++.+.+ .++++|-+--+ . ++ ....+++++++.
T Consensus 296 ~~P~V~vKispd~-----~~ed~~~iA~~~~~-aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~ 369 (443)
T 1tv5_A 296 KKPLVFVKLAPDL-----NQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY 369 (443)
T ss_dssp SCCEEEEEECSCC-----CHHHHHHHHHHHHH-TTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCC-----CHHHHHHHHHHHHH-cCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHH
Confidence 578 888876321 11134445555554 47887655443 1 00 124667778777
Q ss_pred c--CCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEeecCC---CChHHHHHHHHHHh
Q 020275 259 T--KKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCR---TTPSTIQAVSKVLK 325 (328)
Q Consensus 259 ~--~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCG---t~P~hI~al~~~l~ 325 (328)
. +.|++. ++|. .++++..+ .+..||..|+-+-+ .+|.-++.|.+.+.
T Consensus 370 v~~~iPVIg--~GGI--------------~s~~DA~e----~l~aGAd~Vqigrall~~gP~l~~~i~~~l~ 421 (443)
T 1tv5_A 370 TNKQIPIIA--SGGI--------------FSGLDALE----KIEAGASVCQLYSCLVFNGMKSAVQIKRELN 421 (443)
T ss_dssp TTTCSCEEE--ESSC--------------CSHHHHHH----HHHTTEEEEEESHHHHHHGGGHHHHHHHHHH
T ss_pred cCCCCcEEE--ECCC--------------CCHHHHHH----HHHcCCCEEEEcHHHHhcChHHHHHHHHHHH
Confidence 6 567655 3331 13434333 44579988876655 36777777766553
No 193
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=65.52 E-value=76 Score=28.39 Aligned_cols=151 Identities=16% Similarity=0.112 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeec
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASI 132 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsi 132 (328)
.+.+++.-+.++++|++-|..+=-..-.. -++.+|-.++.+.+++.+. ++-..|+|.
T Consensus 27 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~-----------------grvpviaGv- 83 (297)
T 3flu_A 27 YEQLRDLIDWHIENGTDGIVAVGTTGESA-----TLSVEEHTAVIEAVVKHVA-----------------KRVPVIAGT- 83 (297)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSCEEEEC-
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCcc-----cCCHHHHHHHHHHHHHHhC-----------------CCCcEEEeC-
Confidence 56788888888899999665432111111 3455666677666665442 233456653
Q ss_pred CCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 133 GSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 133 GP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++==
T Consensus 84 g~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn 140 (297)
T 3flu_A 84 GAN------------------NTVEA----IALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT-SIPMIIYN 140 (297)
T ss_dssp CCS------------------SHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred CCc------------------CHHHH----HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEE
Confidence 331 22332 4566677789999998764 256667666666665554 79998543
Q ss_pred EecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 209 SSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 209 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
.. +++.-.-+.+...+ +.+.+++.+|=-.|.....+..+++
T Consensus 141 ~P---~~tg~~l~~~~~~~-La~~pnivgiKdssgd~~~~~~~~~ 181 (297)
T 3flu_A 141 VP---GRTVVSMTNDTILR-LAEIPNIVGVKEASGNIGSNIELIN 181 (297)
T ss_dssp CH---HHHSSCCCHHHHHH-HTTSTTEEEEEECSCCHHHHHHHHH
T ss_pred CC---chhccCCCHHHHHH-HHcCCCEEEEEeCCCCHHHHHHHHH
Confidence 21 22212234444444 4444554444444444555555443
No 194
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=65.04 E-value=97 Score=29.46 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhcCCCeEEEe-cC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHh
Q 020275 161 FHRRRLQVLVESGPDLLAFE-TI--PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINK 231 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 231 (328)
++.+.++.+.+.|+|.|.+- |+ ..+.++..+++.+++. .++.|++.+-++. |..+..++..+..
T Consensus 181 ~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~---~~~~i~~H~Hnd~----GlAvAN~laAv~a 247 (423)
T 3ivs_A 181 DLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGV---VSCDIECHFHNDT----GMAIANAYCALEA 247 (423)
T ss_dssp HHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHH---CSSEEEEEEBCTT----SCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhh---cCCeEEEEECCCC----chHHHHHHHHHHh
Confidence 34667788888999988654 43 4678888888888865 3456788876553 5666666665543
No 195
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=64.96 E-value=1.2e+02 Score=30.83 Aligned_cols=157 Identities=12% Similarity=0.051 Sum_probs=81.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEec-----------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCC---C--CC
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFET-----------IPNKLEAQALVELLEEENIQIPSWICFSSVDG---E--NA 216 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET-----------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~---~--~l 216 (328)
.+.++. .+.++.|.+.|||+..+|. +++..+-..+.++.+..+ +.++ ..-+... + ++
T Consensus 122 ~~~edk----l~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~-~~~l--~~l~R~~n~vgy~~~ 194 (718)
T 3bg3_A 122 VRTHDL----KKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIP-NIPF--QMLLRGANAVGYTNY 194 (718)
T ss_dssp CCHHHH----HHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCS-SSCE--EEEECGGGTTSSSCC
T ss_pred CCHHHH----HHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcc-cchH--HHHhccccccccccc
Confidence 355554 4456677788999988885 443333332323222222 3433 2222110 1 01
Q ss_pred CCCCCHHHHHHHHHhcCCceEEEECC--CChhhhHHHHHHHHhhcCCeEEEEeC-CCCccCCccccccCCCCCChhHHHH
Q 020275 217 PSGESFKECLDIINKSGKVNAVGINC--APPQFVENLICYFKELTKKAIVVYPN-SGEVWDGRAKKWLPSKCLGDGKFES 293 (328)
Q Consensus 217 ~~G~~~~~~~~~~~~~~~~~~iGvNC--~~p~~~~~~l~~l~~~~~~pl~~ypN-~g~~~d~~~~~~~~~~~~~~~~~~~ 293 (328)
.+ .-...-++.+.+. +++.|.|.+ .+.+.+...++.+++.. ..+..+-. .+.+.|+. . ...+++.+.+
T Consensus 195 p~-~~~~~~i~~a~~~-Gvd~irIf~s~n~l~~l~~~i~~ak~~G-~~v~~~i~~~~d~~dp~----r--~~~~~e~~~~ 265 (718)
T 3bg3_A 195 PD-NVVFKFCEVAKEN-GMDVFRVFDSLNYLPNMLLGMEAAGSAG-GVVEAAISYTGDVADPS----R--TKYSLQYYMG 265 (718)
T ss_dssp CH-HHHHHHHHHHHHH-TCCEEEEECSSCCHHHHHHHHHHHHTTT-SEEEEEEECCSCTTCTT----C--CTTCHHHHHH
T ss_pred CC-cchHHHHHHHHhc-CcCEEEEEecHHHHHHHHHHHHHHHHcC-CeEEEEEEeeccccCCC----C--CCCCHHHHHH
Confidence 11 0022333333332 455555444 45566777777766542 33222111 11111211 0 1136888999
Q ss_pred HHHHHHHcCCeEEeecC---CCChHHHHHHHHHHh
Q 020275 294 FATRWRDSGAKLIGGCC---RTTPSTIQAVSKVLK 325 (328)
Q Consensus 294 ~~~~~~~~G~~iiGGCC---Gt~P~hI~al~~~l~ 325 (328)
.+++..+.|+.+|.=|= ..+|..+..+-+.++
T Consensus 266 ~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk 300 (718)
T 3bg3_A 266 LAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLR 300 (718)
T ss_dssp HHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHH
Confidence 99999999998887552 457999888877765
No 196
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=64.67 E-value=81 Score=28.41 Aligned_cols=157 Identities=11% Similarity=0.158 Sum_probs=86.4
Q ss_pred cCCChHHHHHHHHHHHHh----ccceeecCCcC----CChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCC
Q 020275 49 LIKQPHLVKRVHLEYLEA----GADILVTSSYQ----ATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPG 120 (328)
Q Consensus 49 ll~~Pe~V~~iH~~yl~A----GAdiI~TnTy~----as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~ 120 (328)
.++++|.+.++=+...++ |..+|..+.|. +|+.+++ |+. .+.+.++.+++++++
T Consensus 26 sie~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~--Glg-------~~~GL~~L~~~~~e~--------- 87 (288)
T 3tml_A 26 VVESEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFR--GLG-------MDEGLRILSEVKRQL--------- 87 (288)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHTCCEEEECBC----------------C-------HHHHHHHHHHHHHHH---------
T ss_pred cCCCHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcC--CcC-------HHHHHHHHHHHHHhc---------
Confidence 368898888777777666 67777776664 2222221 222 134566677776553
Q ss_pred CCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhc
Q 020275 121 HNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI--PNKLEAQALVELLEEE 198 (328)
Q Consensus 121 ~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~ 198 (328)
.+.++-++ + + ..+++.+.+. +|++-+-.+ .+.. .++.+...
T Consensus 88 ----Glp~~tev----------------~----d--------~~~v~~l~~~-vd~lkIgA~~~~n~~----LLr~~a~~ 130 (288)
T 3tml_A 88 ----GLPVLTDV----------------H----S--------IDEIEQVASV-VDVLQTPAFLCRQTD----FIHACARS 130 (288)
T ss_dssp ----CCCEEEEC----------------C----S--------GGGHHHHHHH-CSEEEECGGGTTCHH----HHHHHHTS
T ss_pred ----CCeEEEEe----------------C----C--------HHHHHHHHHh-CCEEEECcccccCHH----HHHHHHcc
Confidence 23344332 1 1 2355666665 999987653 3333 24444434
Q ss_pred CCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCC------ceEEEECCCC---hhhh---HHHHHHHHhhcCCeEEEE
Q 020275 199 NIQIPSWICFSSVDGENAPSGESFKECLDIINKSGK------VNAVGINCAP---PQFV---ENLICYFKELTKKAIVVY 266 (328)
Q Consensus 199 ~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~------~~~iGvNC~~---p~~~---~~~l~~l~~~~~~pl~~y 266 (328)
++||.++= +.-.+=..+..+++.+.+..+ ...+.+-|+. ++.. ...+..+++ ++.|+++.
T Consensus 131 --gkPVilK~-----G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~~~pV~~D 202 (288)
T 3tml_A 131 --GKPVNIKK-----GQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRE-TNAPVVFD 202 (288)
T ss_dssp --SSCEEEEC-----CTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGG-GSSCEEEE
T ss_pred --CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHh-cCCcEEEc
Confidence 69999764 211122345667777754322 3477788863 2321 456777877 78899886
Q ss_pred eC
Q 020275 267 PN 268 (328)
Q Consensus 267 pN 268 (328)
|.
T Consensus 203 ~s 204 (288)
T 3tml_A 203 AT 204 (288)
T ss_dssp HH
T ss_pred CC
Confidence 54
No 197
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=64.51 E-value=69 Score=27.54 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=51.0
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
.++++...+.|+|++..-. .+ ..+++.+++. +.|+++-. .+++++..... .+++.|++
T Consensus 79 ~d~~~~A~~aGAd~v~~p~-~d----~~v~~~ar~~--g~~~i~Gv-----------~t~~e~~~A~~--~Gad~vk~-- 136 (224)
T 1vhc_A 79 AEQVVLAKSSGADFVVTPG-LN----PKIVKLCQDL--NFPITPGV-----------NNPMAIEIALE--MGISAVKF-- 136 (224)
T ss_dssp HHHHHHHHHHTCSEEECSS-CC----HHHHHHHHHT--TCCEECEE-----------CSHHHHHHHHH--TTCCEEEE--
T ss_pred HHHHHHHHHCCCCEEEECC-CC----HHHHHHHHHh--CCCEEecc-----------CCHHHHHHHHH--CCCCEEEE--
Confidence 3578888889999997552 22 3345566665 47877642 24677776554 47899999
Q ss_pred CCh-hh--hHHHHHHHHhhc-CCeEE
Q 020275 243 APP-QF--VENLICYFKELT-KKAIV 264 (328)
Q Consensus 243 ~~p-~~--~~~~l~~l~~~~-~~pl~ 264 (328)
.| .. -...|+.++... +.|++
T Consensus 137 -Fpa~~~gG~~~lk~l~~~~~~ipvv 161 (224)
T 1vhc_A 137 -FPAEASGGVKMIKALLGPYAQLQIM 161 (224)
T ss_dssp -TTTTTTTHHHHHHHHHTTTTTCEEE
T ss_pred -eeCccccCHHHHHHHHhhCCCCeEE
Confidence 44 22 267788887765 45653
No 198
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=64.41 E-value=83 Score=28.49 Aligned_cols=152 Identities=13% Similarity=0.062 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 53 PHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
.+.+++.-+.++++|+|-|..+ |-+ -.. -++.+|-.++.+.+++.+. ++-..|+|.
T Consensus 31 ~~~l~~lv~~li~~Gv~gl~v~GtTG-E~~-----~Ls~~Er~~v~~~~~~~~~-----------------grvpviaGv 87 (318)
T 3qfe_A 31 LASQERYYAYLARSGLTGLVILGTNA-EAF-----LLTREERAQLIATARKAVG-----------------PDFPIMAGV 87 (318)
T ss_dssp HHHHHHHHHHHHTTTCSEEEESSGGG-TGG-----GSCHHHHHHHHHHHHHHHC-----------------TTSCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcccc-Chh-----hCCHHHHHHHHHHHHHHhC-----------------CCCcEEEeC
Confidence 4678888888889999965544 222 111 2455666666666555441 233456663
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC------CCHHHHHHHHHHHHhcCCCccEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI------PNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~------~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
|.. +..+. .++++...+.|+|.+++=+= ++.+++..-.+.+.+.. ++|++
T Consensus 88 -g~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~-~lPii 143 (318)
T 3qfe_A 88 -GAH------------------STRQV----LEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQS-PLPVV 143 (318)
T ss_dssp -CCS------------------SHHHH----HHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHC-SSCEE
T ss_pred -CCC------------------CHHHH----HHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhC-CCCEE
Confidence 331 22332 34566667789999988653 23455555555555543 69998
Q ss_pred EEEEecCCCCC-CCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHH
Q 020275 206 ICFSSVDGENA-PSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICY 254 (328)
Q Consensus 206 is~~~~~~~~l-~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~ 254 (328)
+==. .+++ .-.-+.+...+..++.+++.+|=--|.....+..+++.
T Consensus 144 lYn~---P~~t~g~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~~~~~ 190 (318)
T 3qfe_A 144 IYNF---PGVCNGIDLDSDMITTIARKNPNVVGVKLTCASVGKITRLAAT 190 (318)
T ss_dssp EEEC---CC----CCCCHHHHHHHHHHCTTEEEEEESSCCHHHHHHHHHH
T ss_pred EEeC---CcccCCCCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHh
Confidence 5432 2221 22334544444443245544444444444455444443
No 199
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=64.33 E-value=56 Score=27.42 Aligned_cols=87 Identities=13% Similarity=0.167 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCeEEEecC----CCHHHHHHHHHHHHhc--CCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCce
Q 020275 163 RRRLQVLVESGPDLLAFETI----PNKLEAQALVELLEEE--NIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVN 236 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~~~~~~--~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 236 (328)
.++++.+.+.|+|.+.+-+. |+ .....+++.+++. + .+++++. .+++++..... .+++
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~-~~~~~~i~~~~~~~~~--~~v~~~~-----------~t~~e~~~~~~--~G~d 141 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPK-ETLDELVSYIRTHAPN--VEIMADI-----------ATVEEAKNAAR--LGFD 141 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSS-SCHHHHHHHHHHHCTT--SEEEEEC-----------SSHHHHHHHHH--TTCS
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcc-cCHHHHHHHHHHhCCC--ceEEecC-----------CCHHHHHHHHH--cCCC
Q ss_pred EEEECCCC----------hhhhHHHHHHHHhhcCCeEEE
Q 020275 237 AVGINCAP----------PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 237 ~iGvNC~~----------p~~~~~~l~~l~~~~~~pl~~ 265 (328)
.|+++... ...-...++++.+..+.|+++
T Consensus 142 ~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia 180 (223)
T 1y0e_A 142 YIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA 180 (223)
T ss_dssp EEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE
T ss_pred EEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEE
No 200
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=63.77 E-value=51 Score=33.93 Aligned_cols=133 Identities=16% Similarity=0.131 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEE-ec----CCCHHHHHHHHHHHHhcC---CCccEEEEEEecCCCCCCCCCCHH-HH
Q 020275 155 LEKLKDFHRRRLQVLVESGPDLLAF-ET----IPNKLEAQALVELLEEEN---IQIPSWICFSSVDGENAPSGESFK-EC 225 (328)
Q Consensus 155 ~~e~~~~h~~qi~~l~~~gvD~i~~-ET----~~~~~E~~a~~~~~~~~~---~~~pv~is~~~~~~~~l~~G~~~~-~~ 225 (328)
.+.+...|.+.++.|.+.|++.|-+ |. ..+.....++-.+.+... .+.++++...+ | ++. +.
T Consensus 181 l~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~--------G-~~~~~~ 251 (765)
T 1u1j_A 181 LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYF--------A-DIPAEA 251 (765)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCS--------S-CCCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCC--------C-CcchHH
Confidence 5889999999999999999998743 32 122333344445555541 14555544432 2 123 56
Q ss_pred HHHHHhcCC-ceEEEECCCC-hhhhHHHHHHHHhhc--CCe--EEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHH
Q 020275 226 LDIINKSGK-VNAVGINCAP-PQFVENLICYFKELT--KKA--IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWR 299 (328)
Q Consensus 226 ~~~~~~~~~-~~~iGvNC~~-p~~~~~~l~~l~~~~--~~p--l~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (328)
...+.+ .+ +++|++-+.. +..+ +.+.... ++- +++-+ + ...|.. +++...+.+.+..
T Consensus 252 ~~~l~~-l~~vd~l~lD~v~~~~~l----~~l~~~l~~~k~L~lGvVd-------g-rni~~~----d~e~v~~~l~~~~ 314 (765)
T 1u1j_A 252 YKTLTS-LKGVTAFGFDLVRGTKTL----DLVKAGFPEGKYLFAGVVD-------G-RNIWAN----DFAASLSTLQALE 314 (765)
T ss_dssp HHHHTT-CTTCCEEEEESSSCTTHH----HHHHHCCCSSCEEEEEEEC-------S-SSCBCC----CHHHHHHHHHHHH
T ss_pred HHHHHc-CCCCcEEEEEecCCcccH----HHHHHhcCCCCEEEEEeeC-------C-cccCCC----CHHHHHHHHHHHH
Confidence 666665 46 9999999875 4333 3333322 222 33322 1 234643 5778888887776
Q ss_pred Hc-CCe--EEeecCCCC
Q 020275 300 DS-GAK--LIGGCCRTT 313 (328)
Q Consensus 300 ~~-G~~--iiGGCCGt~ 313 (328)
+. |.. +|+=-||..
T Consensus 315 ~~lg~~~l~lspsCgL~ 331 (765)
T 1u1j_A 315 GIVGKDKLVVSTSCSLL 331 (765)
T ss_dssp HHCCSSCEEEEESSCGG
T ss_pred HhcCCCcEEEcCCCCcc
Confidence 54 754 899999877
No 201
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=63.32 E-value=83 Score=28.06 Aligned_cols=150 Identities=16% Similarity=0.137 Sum_probs=80.1
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|++-|..+==..-.. -++.+|-.++.+.+++.+. ++-.+|+|
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~-----~Lt~~Er~~v~~~~~~~~~-----------------grvpviaG- 77 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESP-----TLTTDEKELILKTVIDLVD-----------------KRVPVIAG- 77 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSCEEEE-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccc-----cCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe-
Confidence 356788888888899999665442111111 2455666677666665431 23345666
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
+|.. +.++. .++++...+.|+|.+++=+ -++.+++..-.+.+.+.. ++|+++=
T Consensus 78 vg~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiilY 134 (292)
T 3daq_A 78 TGTN------------------DTEKS----IQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAV-KLPVVLY 134 (292)
T ss_dssp CCCS------------------CHHHH----HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH-CSCEEEE
T ss_pred CCcc------------------cHHHH----HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEE
Confidence 4331 22332 3456666778999987764 246666666565555443 6999853
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHH
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENL 251 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~ 251 (328)
=. .+++.-.-+.+...+ +.+.+++.+|=--|.....+..+
T Consensus 135 n~---P~~tg~~l~~~~~~~-La~~pnivgiK~ssgd~~~~~~~ 174 (292)
T 3daq_A 135 NV---PSRTNMTIEPETVEI-LSQHPYIVALKDATNDFEYLEEV 174 (292)
T ss_dssp EC---HHHHSCCCCHHHHHH-HHTSTTEEEEEECCCCHHHHHHH
T ss_pred ec---ccccCCCCCHHHHHH-HhcCCCEEEEEeCCCCHHHHHHH
Confidence 21 122222334444444 43444544433333344444333
No 202
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=63.24 E-value=34 Score=31.55 Aligned_cols=27 Identities=4% Similarity=-0.092 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHhccceeecCCcCCCh
Q 020275 54 HLVKRVHLEYLEAGADILVTSSYQATI 80 (328)
Q Consensus 54 e~V~~iH~~yl~AGAdiI~TnTy~as~ 80 (328)
+...+.|.+.-+-|+-+|+|---..++
T Consensus 37 ~~~~~~y~~rA~gg~Glii~e~~~v~~ 63 (349)
T 3hgj_A 37 DWHLLHYPTRALGGVGLILVEATAVEP 63 (349)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEESSG
T ss_pred HHHHHHHHHHhcCCceEEEecceeecc
Confidence 456667777777788766654333333
No 203
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=63.11 E-value=83 Score=28.04 Aligned_cols=153 Identities=14% Similarity=0.121 Sum_probs=84.4
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+ -.. -++.+|-.++.+.+++.+. ++-..|+|
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttG-E~~-----~Ls~~Er~~v~~~~~~~~~-----------------grvpviaG 75 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTG-ESP-----TLTFEEHEKVIEFAVKRAA-----------------GRIKVIAG 75 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe
Confidence 35678888888889999966543 222 111 2455666677666665442 23345566
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
. |.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 76 v-g~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiil 131 (294)
T 2ehh_A 76 T-GGN------------------ATHEA----VHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV-DIPIII 131 (294)
T ss_dssp C-CCS------------------CHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEE
T ss_pred c-CCC------------------CHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 4 331 22332 4466667788999987754 256677776666655543 699885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICY 254 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~ 254 (328)
==.. +++.-.-+.+...+..++.+++.+|=-.|.....+..+++.
T Consensus 132 Yn~P---~~tg~~l~~~~~~~La~~~pnivgiKds~gd~~~~~~~~~~ 176 (294)
T 2ehh_A 132 YNIP---SRTCVEISVDTMFKLASECENIVASKESTPNMDRISEIVKR 176 (294)
T ss_dssp EECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHH
T ss_pred EeCC---cccCcCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHh
Confidence 3321 22112234554455442445554444444445555555443
No 204
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=62.65 E-value=91 Score=28.33 Aligned_cols=111 Identities=14% Similarity=0.167 Sum_probs=68.1
Q ss_pred CCCHHHHH---HHHHHHHHHHHhcCCCeEEEecC----------CC-----------H----HHHHHHHHHHHhcCCCcc
Q 020275 152 GVDLEKLK---DFHRRRLQVLVESGPDLLAFETI----------PN-----------K----LEAQALVELLEEENIQIP 203 (328)
Q Consensus 152 ~~~~~e~~---~~h~~qi~~l~~~gvD~i~~ET~----------~~-----------~----~E~~a~~~~~~~~~~~~p 203 (328)
.++.+|+. +.|.+-++.+.++|.|.|=+--- |. + .-+..+++++++.- +.|
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 36766654 55666677778899999844321 11 1 22345666666654 689
Q ss_pred EEEEEEecCCCCCCCCCCHHHHHHHHHh--cCCceEEEECCC---------ChhhhHHHHHHHHhhcCCeEEE
Q 020275 204 SWICFSSVDGENAPSGESFKECLDIINK--SGKVNAVGINCA---------PPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 204 v~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~~iGvNC~---------~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
+.+-++..+. ..+|.+.++++..++. ..+++.|-+-.. .|..-...++.+++.++.|+++
T Consensus 212 v~vris~~~~--~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~ 282 (338)
T 1z41_A 212 LFVRVSASDY--TDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGA 282 (338)
T ss_dssp EEEEEECCCC--STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEE
T ss_pred EEEEecCccc--CCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEE
Confidence 9998886543 2357777766554422 246777766432 1223456778888877888765
No 205
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=62.59 E-value=1.4e+02 Score=30.45 Aligned_cols=103 Identities=11% Similarity=0.078 Sum_probs=64.2
Q ss_pred HHHHHHHHhcCCCeE-EEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCC--CCCCCCHHHHHHHH---HhcCCce
Q 020275 163 RRRLQVLVESGPDLL-AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGEN--APSGESFKECLDII---NKSGKVN 236 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i-~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~--l~~G~~~~~~~~~~---~~~~~~~ 236 (328)
..-++...++|+|.| +|-...++..++..++.+++.+ ..+...++...+-. .+...+++..++.+ .+ .++.
T Consensus 200 ~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G--~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~-~Ga~ 276 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAG--GVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVR-AGTH 276 (718)
T ss_dssp HHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTT--SEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHH-HTCS
T ss_pred HHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcC--CeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHH-cCCC
Confidence 445666777899997 3446677888888888888876 44443333321100 11123555444433 33 3666
Q ss_pred EEEECCC----ChhhhHHHHHHHHhhc-CCeEEEEeC
Q 020275 237 AVGINCA----PPQFVENLICYFKELT-KKAIVVYPN 268 (328)
Q Consensus 237 ~iGvNC~----~p~~~~~~l~~l~~~~-~~pl~~ypN 268 (328)
.|.|-=+ .|..+..+++.+++.. +.||.+...
T Consensus 277 ~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~H 313 (718)
T 3bg3_A 277 ILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTH 313 (718)
T ss_dssp EEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECC
T ss_pred EEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 6666533 4999999999999887 567777553
No 206
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=62.59 E-value=78 Score=27.50 Aligned_cols=143 Identities=13% Similarity=0.085 Sum_probs=74.5
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHh-cCCCccEEEEEEecCCCCCCCCCC---HHHHHHHHHhcCCceEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEE-ENIQIPSWICFSSVDGENAPSGES---FKECLDIINKSGKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~---~~~~~~~~~~~~~~~~i 238 (328)
...++...+.|+|.|..+ + ..++.+++ ...+.|+++.|.-.... ..+..+ +.++-..+. .+++.|
T Consensus 48 ~~~~~~~~~~g~~~i~~~--~------~~~~~~~~~~~~~~~~~v~~~~~~~~-~~d~~~~~~~~~v~~a~~--~Ga~~v 116 (273)
T 2qjg_A 48 RKTVNDVAEGGANAVLLH--K------GIVRHGHRGYGKDVGLIIHLSGGTAI-SPNPLKKVIVTTVEEAIR--MGADAV 116 (273)
T ss_dssp HHHHHHHHHHTCSEEEEC--H------HHHHSCCCSSSCCCEEEEECEECCTT-SSSTTCCEECSCHHHHHH--TTCSEE
T ss_pred HHHHHHHHhcCCCEEEeC--H------HHHHHHHHhhcCCCCEEEEEcCCCcC-CCCcccchHHHHHHHHHH--cCCCEE
Confidence 456777778899999753 1 22332222 22257888888642211 112211 333334443 356666
Q ss_pred --EECCC--ChhhhHHHHHHHHhh---cCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEeecCC
Q 020275 239 --GINCA--PPQFVENLICYFKEL---TKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCR 311 (328)
Q Consensus 239 --GvNC~--~p~~~~~~l~~l~~~---~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCG 311 (328)
-+|.. ....+...++.+.+. .+.|+++.-.. ++. .+. ...++++..+.++...+.|+.+|+=.-.
T Consensus 117 ~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~----~G~---~l~-~~~~~~~~~~~a~~a~~~Gad~i~~~~~ 188 (273)
T 2qjg_A 117 SIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYP----RGK---HIQ-NERDPELVAHAARLGAELGADIVKTSYT 188 (273)
T ss_dssp EEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEE----CST---TCS-CTTCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCC----CCc---ccC-CCCCHhHHHHHHHHHHHcCCCEEEECCC
Confidence 65543 333333444443332 35666654211 110 111 1234555666667778889988874434
Q ss_pred CChHHHHHHHHHH
Q 020275 312 TTPSTIQAVSKVL 324 (328)
Q Consensus 312 t~P~hI~al~~~l 324 (328)
.+++.++++++.+
T Consensus 189 ~~~~~l~~i~~~~ 201 (273)
T 2qjg_A 189 GDIDSFRDVVKGC 201 (273)
T ss_dssp SSHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhC
Confidence 6778888877654
No 207
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=62.42 E-value=56 Score=31.64 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.++++.|+++|+|+|.+-+- ++.......++.+++.-.++|+++.. ..+.+++...++ .++++|.+
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~----------v~t~e~a~~l~~--aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN----------IATAEAAKALAE--AGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee----------eCcHHHHHHHHH--cCCCEEEE
Confidence 56889999999999988643 33344455566666542258888742 245566655544 47888887
No 208
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=62.18 E-value=72 Score=27.00 Aligned_cols=94 Identities=11% Similarity=0.130 Sum_probs=53.2
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecC--CCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVD--GENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~--~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.+.++.+.++|++.|.+- ++.. ++.+++.. ++|+ +.+...+ +.++.-+.+..++-..+. .+++.|-+
T Consensus 39 ~~~a~~~~~~G~~~i~~~---~~~~----i~~i~~~~-~~p~-i~~~~~~~~~~~~~i~~~~~~i~~~~~--~Gad~V~l 107 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRAN---SVRD----IKEIQAIT-DLPI-IGIIKKDYPPQEPFITATMTEVDQLAA--LNIAVIAM 107 (234)
T ss_dssp HHHHHHHHHHTCSEEEEE---SHHH----HHHHHTTC-CSCE-EEECBCCCTTSCCCBSCSHHHHHHHHT--TTCSEEEE
T ss_pred HHHHHHHHHCCCcEeecC---CHHH----HHHHHHhC-CCCE-EeeEcCCCCccccccCChHHHHHHHHH--cCCCEEEE
Confidence 567888888999998764 3333 44455443 6887 3432222 334444455555444333 35666666
Q ss_pred CCC---Ch--hhhHHHHHHHHhhc-CCeEEEEe
Q 020275 241 NCA---PP--QFVENLICYFKELT-KKAIVVYP 267 (328)
Q Consensus 241 NC~---~p--~~~~~~l~~l~~~~-~~pl~~yp 267 (328)
... .| ..+..+++.+++.. +.++++-+
T Consensus 108 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~ 140 (234)
T 1yxy_A 108 DCTKRDRHDGLDIASFIRQVKEKYPNQLLMADI 140 (234)
T ss_dssp ECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred cccccCCCCCccHHHHHHHHHHhCCCCeEEEeC
Confidence 554 24 25567777777654 44555543
No 209
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=62.14 E-value=15 Score=31.37 Aligned_cols=98 Identities=10% Similarity=0.053 Sum_probs=51.8
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCC-----CCCCCC-----CCHHHHHHHHHhcCC
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDG-----ENAPSG-----ESFKECLDIINKSGK 234 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~-----~~l~~G-----~~~~~~~~~~~~~~~ 234 (328)
+++.+.+.|+|.+.+-+-. +.+...+.++.+..+ ...+.+++.+..+ -.+..| .+..+.+..+.+ .+
T Consensus 91 ~~~~~~~~Gad~V~i~~~~-~~~~~~~~~~~~~~g-~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~-~G 167 (253)
T 1h5y_A 91 DATTLFRAGADKVSVNTAA-VRNPQLVALLAREFG-SQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEE-LG 167 (253)
T ss_dssp HHHHHHHHTCSEEEESHHH-HHCTHHHHHHHHHHC-GGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHH-HT
T ss_pred HHHHHHHcCCCEEEEChHH-hhCcHHHHHHHHHcC-CCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHh-CC
Confidence 4566667899999976421 122222334444443 1235555555321 111112 345565665554 36
Q ss_pred ceEEEECCCChhh-----hHHHHHHHHhhcCCeEEE
Q 020275 235 VNAVGINCAPPQF-----VENLICYFKELTKKAIVV 265 (328)
Q Consensus 235 ~~~iGvNC~~p~~-----~~~~l~~l~~~~~~pl~~ 265 (328)
++.|.++...+.. -...++++++..+.|+++
T Consensus 168 ~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvia 203 (253)
T 1h5y_A 168 AGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIA 203 (253)
T ss_dssp CSEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEE
T ss_pred CCEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEEE
Confidence 7888887654321 245667777766677654
No 210
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=62.08 E-value=54 Score=28.84 Aligned_cols=91 Identities=11% Similarity=0.092 Sum_probs=56.1
Q ss_pred HHHHHHHHhcCCCeEEEecCCC----------------------HHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCC
Q 020275 163 RRRLQVLVESGPDLLAFETIPN----------------------KLEAQALVELLEEENIQIPSWICFSSVDGENAPSGE 220 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~----------------------~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~ 220 (328)
.+.++.|.++|+|+|-+-+-.+ +.....+++.+++...++|+.+-...+ .-...
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n--~v~~~-- 109 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYAN--LVFNN-- 109 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHH--HHHTT--
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEccc--HHHHh--
Confidence 5678889999999998876222 222334566677663368977632121 11111
Q ss_pred CHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhh
Q 020275 221 SFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKEL 258 (328)
Q Consensus 221 ~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~ 258 (328)
.++..++.+.+ .+++++-+....++.+..+++.++++
T Consensus 110 g~~~~~~~~~~-aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 110 GIDAFYARCEQ-VGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp CHHHHHHHHHH-HTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred hHHHHHHHHHH-cCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 22455555554 36788888877777777777777665
No 211
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=62.01 E-value=57 Score=30.63 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=48.4
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCC---------C--CCCCCCCHHHHHHH---HH
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDG---------E--NAPSGESFKECLDI---IN 230 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~---------~--~l~~G~~~~~~~~~---~~ 230 (328)
.++.+++.|++.+ |+.|..|++.+.+.+++.+...+|++-+....+ + ..+-|.+.+++.+. +.
T Consensus 116 ~i~~a~~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~ 192 (425)
T 2qgh_A 116 EIEQALKLNILFL---NVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAK 192 (425)
T ss_dssp HHHHHHHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEE---EeCCHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHH
Confidence 3445556788755 566788888888877776645677777765321 1 34577777665543 34
Q ss_pred hcCCceEEEECCC
Q 020275 231 KSGKVNAVGINCA 243 (328)
Q Consensus 231 ~~~~~~~iGvNC~ 243 (328)
+.+++...|+-|.
T Consensus 193 ~~~~l~l~Gl~~H 205 (425)
T 2qgh_A 193 KSAFLEPVSVHFH 205 (425)
T ss_dssp HCSSEEEEEEECC
T ss_pred hCCCccEEEEEEE
Confidence 4456777787774
No 212
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=61.92 E-value=85 Score=27.73 Aligned_cols=70 Identities=9% Similarity=0.103 Sum_probs=45.2
Q ss_pred HHHHHHHHHh-cCCCeEEEecC------------CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 162 HRRRLQVLVE-SGPDLLAFETI------------PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 162 h~~qi~~l~~-~gvD~i~~ET~------------~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
|.+.++.+.+ +|+|.|-+.-. .+...+..+++.+++.- +.|+++-++.. -+++.+.+..
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~~~-------~~~~~~~a~~ 184 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLSPN-------VTDIVPIAKA 184 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEECSC-------SSCSHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCC-------hHHHHHHHHH
Confidence 5556666766 89998855321 24555677788887763 58999887531 1345566666
Q ss_pred HHhcCCceEEEE
Q 020275 229 INKSGKVNAVGI 240 (328)
Q Consensus 229 ~~~~~~~~~iGv 240 (328)
+.+ .++++|-+
T Consensus 185 l~~-~G~d~i~v 195 (311)
T 1ep3_A 185 VEA-AGADGLTM 195 (311)
T ss_dssp HHH-TTCSEEEE
T ss_pred HHH-cCCCEEEE
Confidence 655 47888777
No 213
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=61.63 E-value=1.1e+02 Score=28.77 Aligned_cols=105 Identities=12% Similarity=0.027 Sum_probs=62.0
Q ss_pred HHHHHHHHhcCCCeEEEecC-----------CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHh
Q 020275 163 RRRLQVLVESGPDLLAFETI-----------PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINK 231 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-----------~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 231 (328)
.+.++.+.++|+|++.+-++ ...+.++.+.++.++.+ +|++.++. |=. .++.+.+
T Consensus 159 ~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G--l~~~te~~--------d~~----~~~~l~~ 224 (385)
T 3nvt_A 159 AAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG--LGVISEIV--------TPA----DIEVALD 224 (385)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECC--------SGG----GHHHHTT
T ss_pred HHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC--CEEEEecC--------CHH----HHHHHHh
Confidence 56788888899999988874 23567777777777775 99997763 222 2233332
Q ss_pred cCCceEEEE---CCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC
Q 020275 232 SGKVNAVGI---NCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA 303 (328)
Q Consensus 232 ~~~~~~iGv---NC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 303 (328)
. ++.+-| ||.+ .++|+.+.. +++|+++.=.- + .+.++|...+......|.
T Consensus 225 -~-vd~lkIgs~~~~n----~~LL~~~a~-~gkPVilk~G~----------~-----~t~~e~~~Ave~i~~~Gn 277 (385)
T 3nvt_A 225 -Y-VDVIQIGARNMQN----FELLKAAGR-VDKPILLKRGL----------S-----ATIEEFIGAAEYIMSQGN 277 (385)
T ss_dssp -T-CSEEEECGGGTTC----HHHHHHHHT-SSSCEEEECCT----------T-----CCHHHHHHHHHHHHTTTC
T ss_pred -h-CCEEEECcccccC----HHHHHHHHc-cCCcEEEecCC----------C-----CCHHHHHHHHHHHHHcCC
Confidence 1 334333 3333 245555443 46677663211 0 246667666666666665
No 214
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=61.60 E-value=1.2e+02 Score=29.16 Aligned_cols=154 Identities=15% Similarity=0.162 Sum_probs=75.1
Q ss_pred CceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe---cCC------CHHHHHHH---
Q 020275 124 NRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE---TIP------NKLEAQAL--- 191 (328)
Q Consensus 124 ~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E---T~~------~~~E~~a~--- 191 (328)
.+.+|-|-+-=+.+++.||. + +.+++ ..+++.+++.|+|+|=+- |-| .-+|++-+
T Consensus 189 ~~~~vMGIlNvTPDSFsDgg-~--------~~~~a----l~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pv 255 (442)
T 3mcm_A 189 ANTIRMGIVNLSNQSFSDGN-F--------DDNQR----KLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEF 255 (442)
T ss_dssp CSSEEEEEEECSSCC-CCCS-S--------CCCHH----HHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCCCCC-C--------CHHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH
Confidence 46788888877778887764 2 22232 567788888999998554 323 34566654
Q ss_pred HHHHHhcCCC--ccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 192 VELLEEENIQ--IPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 192 ~~~~~~~~~~--~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
++++++.... ..+.||+. -...+.+-+.++...++. +.||=++.......++.+++ .+.|+++..+.
T Consensus 256 I~~l~~~~~~~~~~vpISID---------T~~~~VaeaAL~~~aGa~-i~INDVsg~~d~~m~~v~a~-~g~~vVlMh~~ 324 (442)
T 3mcm_A 256 LEYFKSQLANLIYKPLVSID---------TRKLEVMQKILAKHHDII-WMINDVECNNIEQKAQLIAK-YNKKYVIIHNL 324 (442)
T ss_dssp HHHHHHHTTTCSSCCEEEEE---------CCCHHHHHHHHHHHGGGC-CEEEECCCTTHHHHHHHHHH-HTCEEEEECC-
T ss_pred HHHHHhhccccCCCCeEEEe---------CCCHHHHHHHHhhCCCCC-EEEEcCCCCCChHHHHHHHH-hCCeEEEECCC
Confidence 5555541001 24667773 222232223333111222 22444432223334444433 36799999998
Q ss_pred CCccCCccccccCCCCC-C-hhHHHHHHHHHHHcCC
Q 020275 270 GEVWDGRAKKWLPSKCL-G-DGKFESFATRWRDSGA 303 (328)
Q Consensus 270 g~~~d~~~~~~~~~~~~-~-~~~~~~~~~~~~~~G~ 303 (328)
|...+-....| ...+ + ...+.+.+....++|+
T Consensus 325 G~P~tmq~~~y--~dvv~ev~~~l~~~i~~a~~aGI 358 (442)
T 3mcm_A 325 GITDRNQYLDK--ENAIDNVCDYIEQKKQILLKHGI 358 (442)
T ss_dssp -----------------CTHHHHHHHHHHHHHHHTC
T ss_pred CCCccccccCc--ccHHHHHHHHHHHHHHHHHHcCC
Confidence 85321110001 0000 1 2345666777888898
No 215
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=61.59 E-value=91 Score=31.54 Aligned_cols=48 Identities=10% Similarity=-0.019 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCCC----------------H---HHHHHHHHHHHhcCCCccEEEEEE
Q 020275 156 EKLKDFHRRRLQVLVESGPDLLAFETIPN----------------K---LEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 156 ~e~~~~h~~qi~~l~~~gvD~i~~ET~~~----------------~---~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
.++.+||++++ +.|+.+|+.|...- - .-.+.+++++++.+ .++++++.
T Consensus 39 ~~~~~~y~~ra----~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~ 105 (729)
T 1o94_A 39 GFQSAHRSVKA----EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHKYG--ALAGVELW 105 (729)
T ss_dssp HHHHHHHHHHH----HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHTTT--CEEEEEEE
T ss_pred HHHHHHHHHHh----cCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHhCC--CeEEEEec
Confidence 47778888775 47899998884411 1 12445556666654 78888886
No 216
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=61.10 E-value=35 Score=31.35 Aligned_cols=21 Identities=5% Similarity=-0.077 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHhccceeecC
Q 020275 54 HLVKRVHLEYLEAGADILVTS 74 (328)
Q Consensus 54 e~V~~iH~~yl~AGAdiI~Tn 74 (328)
+...+.|.+.-+-|+-+|+|-
T Consensus 39 ~~~~~~y~~rA~gG~Glii~e 59 (340)
T 3gr7_A 39 TWHKIHYPARAVGQVGLIIVE 59 (340)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHhcCCceEEEEc
Confidence 566667777777788766653
No 217
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=61.07 E-value=92 Score=27.88 Aligned_cols=152 Identities=13% Similarity=0.111 Sum_probs=85.5
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|+|-|..+= ++-+. .-++.+|-.++.+.+++.+. ++-..|+|.
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~G--ttGE~---~~Ls~~Er~~v~~~~~~~~~-----------------grvpviaGv 80 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLG--STGEF---AYLGTAQREAVVRATIEAAQ-----------------RRVPVVAGV 80 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTS--GGGTG---GGCCHHHHHHHHHHHHHHHT-----------------TSSCBEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc--cccCc---cccCHHHHHHHHHHHHHHhC-----------------CCCcEEEeC
Confidence 356788888888899999776542 11111 13465666677666665542 233456664
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
-+. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++=
T Consensus 81 g~~-------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilY 136 (300)
T 3eb2_A 81 AST-------------------SVADA----VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAV-EIPVVIY 136 (300)
T ss_dssp EES-------------------SHHHH----HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred CCC-------------------CHHHH----HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHC-CCCEEEE
Confidence 322 22332 4566667778999988753 246677766666665543 6999854
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC--ChhhhHHHHHHH
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA--PPQFVENLICYF 255 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~--~p~~~~~~l~~l 255 (328)
=. .+++.-.-+.+ .+..+.+.+++ +||--+ ....+..+++..
T Consensus 137 n~---P~~tg~~l~~~-~~~~La~~pnI--vgiKdssgd~~~~~~~~~~~ 180 (300)
T 3eb2_A 137 TN---PQFQRSDLTLD-VIARLAEHPRI--RYIKDASTNTGRLLSIINRC 180 (300)
T ss_dssp EC---TTTCSSCCCHH-HHHHHHTSTTE--EEEEECSSBHHHHHHHHHHH
T ss_pred EC---ccccCCCCCHH-HHHHHHcCCCE--EEEEcCCCCHHHHHHHHHHc
Confidence 32 23332334454 34444444454 555554 345555555543
No 218
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=60.93 E-value=96 Score=28.00 Aligned_cols=192 Identities=17% Similarity=0.158 Sum_probs=105.7
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+ -. ..++.+|-.++++.+++.+. ++-..|+|
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTG-E~-----~~Ls~eEr~~vi~~~~~~~~-----------------grvpViaG 87 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTG-EF-----YALTIEEAKQVATRVTELVN-----------------GRATVVAG 87 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGG-TG-----GGSCHHHHHHHHHHHHHHHT-----------------TSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccC-Ch-----hhCCHHHHHHHHHHHHHHhC-----------------CCCeEEec
Confidence 45678888888899999977655 222 11 13465666677666665432 23345565
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC----CCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI----PNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
. |. .. ++. .++++...+.|+|.+++=+= |+.+++..-.+.+.+.. ++|+++
T Consensus 88 v-g~-st------------------~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiil 142 (314)
T 3d0c_A 88 I-GY-SV------------------DTA----IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL-DAPSII 142 (314)
T ss_dssp E-CS-SH------------------HHH----HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS-SSCEEE
T ss_pred C-Cc-CH------------------HHH----HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEE
Confidence 4 33 21 111 35667777899999987542 56677666666655543 699886
Q ss_pred EEEecCCCCCCCC-CCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCC--eEEEEeCCCCccCCccccccCC
Q 020275 207 CFSSVDGENAPSG-ESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKK--AIVVYPNSGEVWDGRAKKWLPS 283 (328)
Q Consensus 207 s~~~~~~~~l~~G-~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~--pl~~ypN~g~~~d~~~~~~~~~ 283 (328)
== + .| -+.+...+ +.+.+++.+|=-.|.....+..+++.. +. .+.+|. +
T Consensus 143 Yn------~--tg~l~~~~~~~-La~~pnIvgiKdssgd~~~~~~~~~~~----~~~~~f~v~~---------------G 194 (314)
T 3d0c_A 143 YF------K--DAHLSDDVIKE-LAPLDKLVGIKYAINDIQRVTQVMRAV----PKSSNVAFIC---------------G 194 (314)
T ss_dssp EE------C--CTTSCTHHHHH-HTTCTTEEEEEECCCCHHHHHHHHHHS----CGGGCCEEEE---------------T
T ss_pred Ee------C--CCCcCHHHHHH-HHcCCCEEEEEeCCCCHHHHHHHHHhc----CCCCCEEEEE---------------e
Confidence 43 2 33 34444444 334445444444444454554444332 11 122221 1
Q ss_pred CCCChhHHHHHHHHHHHcCC-eEEeecCCCChHHHHHHHHHHh
Q 020275 284 KCLGDGKFESFATRWRDSGA-KLIGGCCRTTPSTIQAVSKVLK 325 (328)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~G~-~iiGGCCGt~P~hI~al~~~l~ 325 (328)
.++. +...++..|+ -+|+|+...-|+...+|-+++.
T Consensus 195 ----~d~~--~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~ 231 (314)
T 3d0c_A 195 ----TAEK--WAPFFYHAGAVGFTSGLVNVFPQKSFALLEALE 231 (314)
T ss_dssp ----THHH--HHHHHHHHTCCEEEESGGGTCHHHHHHHHHHHH
T ss_pred ----CcHH--HHHHHHHcCCCEEEecHHHhhHHHHHHHHHHHH
Confidence 1120 2223444564 5677777778888888876653
No 219
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=60.93 E-value=1.2e+02 Score=29.20 Aligned_cols=90 Identities=13% Similarity=0.252 Sum_probs=51.6
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEE-EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWI-CFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~i-s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.++++.+.++|+|+|.+-+- .+......+++.+++.-.+.|+++ ++ .+.+++....+. ++++|-+
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v-----------~t~~~a~~l~~a--Gad~I~v 323 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV-----------VTAAQAKNLIDA--GVDGLRV 323 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE-----------CSHHHHHHHHHH--TCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc-----------chHHHHHHHHHc--CCCEEEE
Confidence 56788888999999987433 333334455666665422588886 22 345555554443 6777744
Q ss_pred C------CC-------C--hhhhHHHHHHHHhhcCCeEEE
Q 020275 241 N------CA-------P--PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 241 N------C~-------~--p~~~~~~l~~l~~~~~~pl~~ 265 (328)
. |+ . .......++++.+..+.|+++
T Consensus 324 g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia 363 (514)
T 1jcn_A 324 GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA 363 (514)
T ss_dssp CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE
Confidence 2 21 0 112234555666655677654
No 220
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=60.73 E-value=10 Score=34.13 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=72.3
Q ss_pred hcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC----
Q 020275 171 ESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP---- 244 (328)
Q Consensus 171 ~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~---- 244 (328)
..-+|++=|- |..-..+++..++.+++.+ +++..-=|+-+- .+..| .+.+.++.+++ .+..+|=|+-..
T Consensus 63 g~yID~lKfg~GTs~l~~~l~ekI~l~~~~g--V~v~~GGTlfE~-~l~qg-~~~~yl~~~k~-lGF~~IEISdGti~l~ 137 (276)
T 1u83_A 63 SDYIDFVKFGWGTSLLTKDLEEKISTLKEHD--ITFFFGGTLFEK-YVSQK-KVNEFHRYCTY-FGCEYIEISNGTLPMT 137 (276)
T ss_dssp GGGCCEEEECTTGGGGCTTHHHHHHHHHHTT--CEEEECHHHHHH-HHHTT-CHHHHHHHHHH-TTCSEEEECCSSSCCC
T ss_pred hhhcceEEecCcchhhhHHHHHHHHHHHHcC--CeEeCCcHHHHH-HHHcC-cHHHHHHHHHH-cCCCEEEECCCcccCC
Confidence 3568997554 4433345888899999886 555421111000 01122 56666777765 588898888853
Q ss_pred hhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 245 PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 245 p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
.+....+++..+ +. +.|.+..|.. + +.....++++.|.+.+++.+++||..|
T Consensus 138 ~~~~~~lI~~a~---~~-f~Vl~EvG~K-~-----~~~~~~~~~~~~I~~~~~dLeAGA~~V 189 (276)
T 1u83_A 138 NKEKAAYIADFS---DE-FLVLSEVGSK-D-----AELASRQSSEEWLEYIVEDMEAGAEKV 189 (276)
T ss_dssp HHHHHHHHHHHT---TT-SEEEEECSCC-C-----------CCSTHHHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHHHHH---hh-cEEeeecccc-C-----ccccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 344555666543 34 7777877742 1 111223578999999999999998543
No 221
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=60.68 E-value=95 Score=27.87 Aligned_cols=151 Identities=15% Similarity=0.058 Sum_probs=83.0
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+=. .-++.+|-.++.+.+++.+. ++-..|+|
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Ls~~Er~~v~~~~~~~~~-----------------grvpviaG 91 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGES------PTTTAAEKLELLKAVREEVG-----------------DRAKLIAG 91 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTT------TTSCHHHHHHHHHHHHHHHT-----------------TTSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC-----------------CCCcEEec
Confidence 45678888888899999966543 32211 13465666677666665442 23345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
. |.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 92 v-g~~------------------st~~a----i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiil 147 (304)
T 3cpr_A 92 V-GTN------------------NTRTS----VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT-EVPICL 147 (304)
T ss_dssp C-CCS------------------CHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEE
T ss_pred C-CCC------------------CHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 4 331 22332 4456666778999987754 246666666666655543 699885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
==. .+++.-.-+.+...+. .+.+++.+|=--|.....+..+++
T Consensus 148 Yn~---P~~tg~~l~~~~~~~L-a~~pnIvgiKdssgd~~~~~~~~~ 190 (304)
T 3cpr_A 148 YDI---PGRSGIPIESDTMRRL-SELPTILAVXDAKGDLVAATSLIK 190 (304)
T ss_dssp EEC---HHHHSSCCCHHHHHHH-TTSTTEEEEEECSCCHHHHHHHHH
T ss_pred EeC---ccccCcCCCHHHHHHH-HcCCCEEEEecCCCCHHHHHHHHH
Confidence 322 1222122344444444 344454444444444555555544
No 222
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=60.59 E-value=52 Score=30.13 Aligned_cols=25 Identities=12% Similarity=-0.080 Sum_probs=18.2
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHH
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQ 189 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~ 189 (328)
.++.|.+.|+|.|.++.-.++.+++
T Consensus 257 ~l~~l~~~g~d~~~~d~~~d~~~~~ 281 (359)
T 2inf_A 257 LAGDWHDLPLDVVGLDWRLGIDEAR 281 (359)
T ss_dssp GHHHHHTSSCSEEECCTTSCHHHHH
T ss_pred HHHHHHHhCCCEEEeCCCCCHHHHH
Confidence 3445667899999999766766643
No 223
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=60.53 E-value=71 Score=26.37 Aligned_cols=79 Identities=10% Similarity=0.056 Sum_probs=46.4
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP 244 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~ 244 (328)
+++...+.|+|++ +-.... ..+++.+++.+ +|++..+ .+.+++...+. .+++.+.++-..
T Consensus 75 ~~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~g--~~vi~g~-----------~t~~e~~~a~~--~Gad~vk~~~~~ 134 (205)
T 1wa3_A 75 QCRKAVESGAEFI-VSPHLD----EEISQFCKEKG--VFYMPGV-----------MTPTELVKAMK--LGHTILKLFPGE 134 (205)
T ss_dssp HHHHHHHHTCSEE-ECSSCC----HHHHHHHHHHT--CEEECEE-----------CSHHHHHHHHH--TTCCEEEETTHH
T ss_pred HHHHHHHcCCCEE-EcCCCC----HHHHHHHHHcC--CcEECCc-----------CCHHHHHHHHH--cCCCEEEEcCcc
Confidence 4555666899999 443333 23567777764 8888522 24556665543 478888876432
Q ss_pred hhhhHHHHHHHHhhc-CCeEE
Q 020275 245 PQFVENLICYFKELT-KKAIV 264 (328)
Q Consensus 245 p~~~~~~l~~l~~~~-~~pl~ 264 (328)
+. -...++++.... +.|++
T Consensus 135 ~~-g~~~~~~l~~~~~~~pvi 154 (205)
T 1wa3_A 135 VV-GPQFVKAMKGPFPNVKFV 154 (205)
T ss_dssp HH-HHHHHHHHHTTCTTCEEE
T ss_pred cc-CHHHHHHHHHhCCCCcEE
Confidence 22 235566666654 44543
No 224
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=60.52 E-value=92 Score=27.69 Aligned_cols=152 Identities=13% Similarity=0.101 Sum_probs=84.1
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|++-|..+ |-+ +. .-++.+|-.++.+.+++.+. ++-..|+|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~---~~Ls~~Er~~v~~~~~~~~~-----------------gr~pviaG 76 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTG---EA---STLSMEEHTQVIKEIIRVAN-----------------KRIPIIAG 76 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTT---TG---GGSCHHHHHHHHHHHHHHHT-----------------TSSCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccc---cc---ccCCHHHHHHHHHHHHHHhC-----------------CCCeEEEe
Confidence 35778888888889999966533 222 11 13455666666666655442 23345665
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
+|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 77 -vg~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiil 132 (291)
T 3tak_A 77 -TGAN------------------STREA----IELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV-ELPLIL 132 (291)
T ss_dssp -CCCS------------------SHHHH----HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEE
T ss_pred -CCCC------------------CHHHH----HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 3331 22333 3566667778999998764 256667666666665554 799985
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICY 254 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~ 254 (328)
==. ..++.-.-+.+...+ +.+.+++.+|=-.+.....+..+++.
T Consensus 133 Yn~---P~~tg~~l~~~~~~~-La~~pnivgiK~ssgd~~~~~~~~~~ 176 (291)
T 3tak_A 133 YNV---PGRTGVDLSNDTAVR-LAEIPNIVGIKDATGDVPRGKALIDA 176 (291)
T ss_dssp EEC---HHHHSCCCCHHHHHH-HTTSTTEEEEEECSCCHHHHHHHHHH
T ss_pred Eec---ccccCCCCCHHHHHH-HHcCCCEEEEEeCCCCHHHHHHHHHH
Confidence 322 122222334554444 43445544333334445555555544
No 225
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=60.35 E-value=93 Score=27.67 Aligned_cols=152 Identities=9% Similarity=0.002 Sum_probs=82.5
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+ -. .-++.+|-.++.+.+++.+. ++-..|+|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttG-E~-----~~Ls~~Er~~v~~~~~~~~~-----------------gr~pvi~G 76 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTG-EA-----TTMTETERKETIKFVIDKVN-----------------KRIPVIAG 76 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGG-TG-----GGSCHHHHHHHHHHHHHHHT-----------------TSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-Ch-----hhCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe
Confidence 56778888888899999966543 222 11 13455666677666665442 22345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC----CCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI----PNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
. |.. +.++. .++++...+.|+|.+++=+= |+.+++..-.+.+.+.. ++|+++
T Consensus 77 v-g~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiil 132 (291)
T 3a5f_A 77 T-GSN------------------NTAAS----IAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAV-STPIII 132 (291)
T ss_dssp C-CCS------------------SHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGC-CSCEEE
T ss_pred C-Ccc------------------cHHHH----HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 4 331 22332 45666677899999887642 45566555555444443 699885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICY 254 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~ 254 (328)
==. .+++.-.-+.+...+.. +.+++.+|=-.|.....+..+++.
T Consensus 133 Yn~---P~~tg~~l~~~~~~~La-~~pnivgiK~s~gd~~~~~~~~~~ 176 (291)
T 3a5f_A 133 YNV---PGRTGLNITPGTLKELC-EDKNIVAVXEASGNISQIAQIKAL 176 (291)
T ss_dssp EEC---HHHHSCCCCHHHHHHHT-TSTTEEEEEECSCCHHHHHHHHHH
T ss_pred EeC---ccccCCCCCHHHHHHHH-cCCCEEEEeCCCCCHHHHHHHHHh
Confidence 321 12211223444444443 445544444444455555555544
No 226
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=60.27 E-value=97 Score=27.84 Aligned_cols=151 Identities=11% Similarity=0.017 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeec
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASI 132 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsi 132 (328)
.+.+++.-+.++++|+|-|..+==..-.. -++.+|-.++.+.+++.+ .++-..|+|.
T Consensus 34 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-----~Ls~~Er~~v~~~~~~~~-----------------~gr~pviaGv- 90 (307)
T 3s5o_A 34 YGKLEENLHKLGTFPFRGFVVQGSNGEFP-----FLTSSERLEVVSRVRQAM-----------------PKNRLLLAGS- 90 (307)
T ss_dssp HHHHHHHHHHHTTSCCSEEEESSGGGTGG-----GSCHHHHHHHHHHHHHTS-----------------CTTSEEEEEC-
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccchh-----hCCHHHHHHHHHHHHHHc-----------------CCCCcEEEec-
Confidence 56788888888899999655432111111 245555666655544332 2234456664
Q ss_pred CCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC------CCHHHHHHHHHHHHhcCCCccEEE
Q 020275 133 GSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI------PNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 133 GP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~------~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
|.. +.++. .++++...+.|+|.+++=+= ++.+++..-.+.+.+.. ++|+++
T Consensus 91 g~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~-~lPiil 147 (307)
T 3s5o_A 91 GCE------------------STQAT----VEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLS-PIPVVL 147 (307)
T ss_dssp CCS------------------SHHHH----HHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred CCC------------------CHHHH----HHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhc-CCCEEE
Confidence 331 22332 34566667789999987542 36667666666665553 699985
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
==. .+++.-.-+.+...+.. +.+++.+|=-.|.....+..+++
T Consensus 148 Yn~---P~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~ 190 (307)
T 3s5o_A 148 YSV---PANTGLDLPVDAVVTLS-QHPNIVGMXDSGGDVTRIGLIVH 190 (307)
T ss_dssp EEC---HHHHSCCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHHH
T ss_pred EeC---CcccCCCCCHHHHHHHh-cCCCEEEEEcCCCCHHHHHHHHH
Confidence 432 12222233454444443 44554444433334444544443
No 227
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A*
Probab=60.04 E-value=18 Score=34.38 Aligned_cols=40 Identities=23% Similarity=0.213 Sum_probs=28.2
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHH
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAE 94 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~ 94 (328)
+.+|+-...+++ |-+.|||+..| |+ +..+++.|++.+.++
T Consensus 76 Lk~~~Gr~~l~~--Lv~~ADV~ven-fr--PG~~~rlGL~ye~L~ 115 (408)
T 1xk7_A 76 IFKDEGREAFLK--LMETTDIFIEA-SK--GPAFARRGITDEVLW 115 (408)
T ss_dssp TTSHHHHHHHHH--HHTTCSEEEEE-CS--SSHHHHTTCCHHHHH
T ss_pred CCCHHHHHHHHH--HHhhCCEEEEC-CC--ccHHHHcCCCHHHHH
Confidence 566765554443 45679999999 66 667889999875443
No 228
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=60.02 E-value=94 Score=27.65 Aligned_cols=151 Identities=18% Similarity=0.062 Sum_probs=81.6
Q ss_pred ChHHHHHHHHHHHH-hccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 52 QPHLVKRVHLEYLE-AGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~-AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
+.+.+++.-+.+++ +|+|-|..+ |-+ -. .-++.+|-.++.+.+++.+. ++-..|+
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttG-E~-----~~Ls~~Er~~v~~~~~~~~~-----------------grvpvia 78 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTG-EN-----FMLSTEEKKEIFRIAKDEAK-----------------DQIALIA 78 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGG-TG-----GGSCHHHHHHHHHHHHHHHT-----------------TSSEEEE
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCcccc-ch-----hhCCHHHHHHHHHHHHHHhC-----------------CCCeEEE
Confidence 35678887777888 999976544 221 11 13465666677666665432 2334556
Q ss_pred eecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC----CCHHHHHHHHHHHHhcCCCccEE
Q 020275 130 ASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI----PNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 130 GsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
|. |.. +.++. .++++...+.|+|.+++=+= |+.+++..-.+.+.+.. ++|++
T Consensus 79 Gv-g~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPii 134 (293)
T 1f6k_A 79 QV-GSV------------------NLKEA----VELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAET-GSNMI 134 (293)
T ss_dssp EC-CCS------------------CHHHH----HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH-CCCEE
T ss_pred ec-CCC------------------CHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEE
Confidence 64 331 22332 34566667789999877542 46666665555554432 58988
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 206 ICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 206 is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
+==. .+++.-.-+.+...+.. +.+++.+|=-.|.....+..+++
T Consensus 135 lYn~---P~~tg~~l~~~~~~~La-~~pnIvgiK~s~gd~~~~~~~~~ 178 (293)
T 1f6k_A 135 VYSI---PFLTGVNMGIEQFGELY-KNPKVLGVKFTAGDFYLLERLKK 178 (293)
T ss_dssp EEEC---HHHHCCCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHHH
T ss_pred EEEC---ccccCcCCCHHHHHHHh-cCCCEEEEEECCCCHHHHHHHHH
Confidence 5321 12221223454444443 44554444444444555555443
No 229
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=59.97 E-value=70 Score=29.59 Aligned_cols=16 Identities=25% Similarity=0.322 Sum_probs=8.2
Q ss_pred hccceeecCCcCCChh
Q 020275 66 AGADILVTSSYQATIP 81 (328)
Q Consensus 66 AGAdiI~TnTy~as~~ 81 (328)
||+.+|+|=--..++.
T Consensus 49 A~~GLiite~~~v~~~ 64 (365)
T 2gou_A 49 ASAGLIVSEGTQISPT 64 (365)
T ss_dssp TTSSEEEEEEEESSGG
T ss_pred hcCCEEEECceeeccc
Confidence 5666666543333433
No 230
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=59.96 E-value=1.4e+02 Score=29.74 Aligned_cols=50 Identities=12% Similarity=0.135 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEecCC-------------------CHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLLAFETIP-------------------NKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~-------------------~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
+.+.+..||..+ ...|+.+|+.|... .....+.+++++++.+ .++++.+.
T Consensus 42 ~~~~~~~~~~~~----a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~ 110 (690)
T 3k30_A 42 DPSAQASMRKIK----AEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGG--GLAGIELA 110 (690)
T ss_dssp CHHHHHHHHHHH----HHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred ChHHHHHHHHHH----hccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhcC--CEEEEEcc
Confidence 334444444433 45789999888432 1344566778887765 78888886
No 231
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=59.85 E-value=56 Score=28.20 Aligned_cols=90 Identities=12% Similarity=0.118 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCCeEEEe-----cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCC--------------CCCCC-CH
Q 020275 163 RRRLQVLVESGPDLLAFE-----TIPNKLEAQALVELLEEENIQIPSWICFSSVDGEN--------------APSGE-SF 222 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~--------------l~~G~-~~ 222 (328)
.+.++.+.+.|+|++-+- .+|++..-..+++.+|+...++|+-+-+-+.+..+ ..... .+
T Consensus 21 ~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~Ad~itvH~ea~~~~~ 100 (227)
T 1tqx_A 21 AEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKTSNQLTFHFEALNEDT 100 (227)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTTSSEEEEEGGGGTTCH
T ss_pred HHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHhCCEEEEeecCCccCH
Confidence 457777888899886544 24666665677888887632588888888776321 11222 46
Q ss_pred HHHHH---HHHhcCCceEEEECCCCh-hhhHHHH
Q 020275 223 KECLD---IINKSGKVNAVGINCAPP-QFVENLI 252 (328)
Q Consensus 223 ~~~~~---~~~~~~~~~~iGvNC~~p-~~~~~~l 252 (328)
..+++ .+++..--.++-+|...| +.+..++
T Consensus 101 ~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l 134 (227)
T 1tqx_A 101 ERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPIL 134 (227)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHh
Confidence 67777 776543334566776544 4444443
No 232
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=59.83 E-value=21 Score=32.20 Aligned_cols=66 Identities=12% Similarity=0.217 Sum_probs=42.9
Q ss_pred HHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 164 RRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
++++..++.|+|+|.+.+| ++.+++.+++.++....+.++.+| .|-+++.+.++.. .+++.|++-.
T Consensus 205 eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~ieaS----------GGIt~~~i~~~a~--tGVD~isvG~ 270 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTVMLESS----------GGLSLQTAATYAE--TGVDYLAVGA 270 (284)
T ss_dssp HHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEE----------SSCCTTTHHHHHH--TTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeEEEEE----------CCCCHHHHHHHHh--cCCCEEEECH
Confidence 3566666789999999996 568888888887764323444433 3445555555443 4688887655
No 233
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=59.78 E-value=1.1e+02 Score=28.27 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=73.6
Q ss_pred HHHHHHHHhcCCCeE-EEecCCC---HHHHH--------HHHHHHHhcCC--CccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 163 RRRLQVLVESGPDLL-AFETIPN---KLEAQ--------ALVELLEEENI--QIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i-~~ET~~~---~~E~~--------a~~~~~~~~~~--~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
...++.+.++|+|.| +|++... .+.-+ .+++.+++... +.|++ -|++ |. ...+..
T Consensus 200 ~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi-~f~~--------g~--~~~l~~ 268 (368)
T 4exq_A 200 AAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAI-AFTK--------GG--GLWLED 268 (368)
T ss_dssp HHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEE-EEET--------TC--GGGHHH
T ss_pred HHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEE-EEcC--------Cc--HHHHHH
Confidence 344555667999998 4575432 22222 22333332110 25764 4542 21 123344
Q ss_pred HHhcCCceEEEECCC-ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc-C---C
Q 020275 229 INKSGKVNAVGINCA-PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS-G---A 303 (328)
Q Consensus 229 ~~~~~~~~~iGvNC~-~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G---~ 303 (328)
+.+ .+++++++.-. .+ ..+-+.+ ..-+.++.|- |+. .+. -++++..+.+++.++. | -
T Consensus 269 l~~-~g~d~i~~d~~~dl---~~ak~~~----g~~~~l~Gnl----dp~---~L~---gt~e~I~~~v~~~l~~~g~~~g 330 (368)
T 4exq_A 269 LAA-TGVDAVGLDWTVNL---GRARERV----AGRVALQGNL----DPT---ILF---APPEAIRAEARAVLDSYGNHPG 330 (368)
T ss_dssp HHT-SSCSEEECCTTSCH---HHHHHHH----TTSSEEEEEE----CGG---GGG---SCHHHHHHHHHHHHHHHCSCSC
T ss_pred HHH-hCCCEEeeCCCCCH---HHHHHHh----CCCEEEEECC----CHH---HhC---CCHHHHHHHHHHHHHHhCCCCC
Confidence 444 57888888643 33 2232222 2334455552 221 222 2688898988888754 3 3
Q ss_pred eEEeecCCC----ChHHHHHHHHHHhc
Q 020275 304 KLIGGCCRT----TPSTIQAVSKVLKE 326 (328)
Q Consensus 304 ~iiGGCCGt----~P~hI~al~~~l~~ 326 (328)
-|++--||. .|++|+++.+++++
T Consensus 331 ~I~n~Ghgi~p~tp~Env~a~veav~~ 357 (368)
T 4exq_A 331 HVFNLGHGISQFTPPEHVAELVDEVHR 357 (368)
T ss_dssp EEEEESSCCCTTCCHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCcCHHHHHHHHHHHHH
Confidence 788877875 58999999888764
No 234
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=59.78 E-value=90 Score=27.32 Aligned_cols=149 Identities=13% Similarity=0.084 Sum_probs=76.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhc
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKS 232 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 232 (328)
-+.+++.++-.+.++.|.+.|+|+|++=..+. -..+++.+++.- +.||+ .+ .+.++..+...
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa---s~~~l~~lr~~~-~iPvi-gi-------------~ep~~~~A~~~ 106 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTA---TAVVLEEMQKQL-PIPVV-GV-------------IHPGSRTALKV 106 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHH---HHHHHHHHHHHC-SSCEE-ES-------------HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchh---hHHHHHHHHHhC-CCCEE-ee-------------cHHHHHHHHHc
Confidence 37899999999999999999999998743221 112466676653 68977 21 23444433221
Q ss_pred CCceEEEECCCChh----hhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC-eEEe
Q 020275 233 GKVNAVGINCAPPQ----FVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA-KLIG 307 (328)
Q Consensus 233 ~~~~~iGvNC~~p~----~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~iiG 307 (328)
.+-.-|||=.+... .....++.... +..+...|..+.... -...+... ....+.+.+++..+.+.|+ .||=
T Consensus 107 ~~~~rIgVlaT~~T~~~~~y~~~l~~~~~--g~~v~~~~~~~~v~~-ie~g~~~~-~~~~~~l~~~~~~l~~~~~d~iVL 182 (267)
T 2gzm_A 107 TNTYHVGIIGTIGTVKSGAYEEALKSINN--RVMVESLACPPFVEL-VESGNFES-EMAYEVVRETLQPLKNTDIDTLIL 182 (267)
T ss_dssp CSSCEEEEEECHHHHHHTHHHHHHHHHCT--TCEEEEEECTTHHHH-HHTTCSSS-HHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred cCCCEEEEEEChHHhccHHHHHHHHHhCC--CCEEeccCCHHHHHH-HhCCCCCC-HHHHHHHHHHHHHHHhcCCCEEEE
Confidence 22234666555322 23344443321 233433454331110 00001100 0012346677777877787 4555
Q ss_pred ecCCCChHHHHHHHHHH
Q 020275 308 GCCRTTPSTIQAVSKVL 324 (328)
Q Consensus 308 GCCGt~P~hI~al~~~l 324 (328)
||-.-.. -...+.+.+
T Consensus 183 GCTh~p~-l~~~i~~~~ 198 (267)
T 2gzm_A 183 GCTHYPI-LGPVIKQVM 198 (267)
T ss_dssp CSTTGGG-GHHHHHHHH
T ss_pred cccChHH-HHHHHHHHc
Confidence 6755443 344454443
No 235
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=59.75 E-value=1e+02 Score=27.88 Aligned_cols=150 Identities=13% Similarity=0.084 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 53 PHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
.+.+++.-+.++++|+|-|..+ |-+ -. .-++.+|-.++.+.+++.+. ++-.+|+|
T Consensus 43 ~~~l~~lv~~li~~Gv~Gl~v~GtTG-E~-----~~Ls~~Er~~v~~~~v~~~~-----------------grvpViaG- 98 (314)
T 3qze_A 43 WDSLAKLVDFHLQEGTNAIVAVGTTG-ES-----ATLDVEEHIQVIRRVVDQVK-----------------GRIPVIAG- 98 (314)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSGGG-TG-----GGCCHHHHHHHHHHHHHHHT-----------------TSSCEEEE-
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccc-Ch-----hhCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe-
Confidence 5678888888889999966544 222 11 13466667777766665542 23345565
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
+|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++=
T Consensus 99 vg~~------------------st~ea----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilY 155 (314)
T 3qze_A 99 TGAN------------------STREA----VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV-AIPQILY 155 (314)
T ss_dssp CCCS------------------SHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS-CSCEEEE
T ss_pred CCCc------------------CHHHH----HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEE
Confidence 3331 22333 4566777789999998765 256677666666665543 7999864
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
=.. +++...-+.+...+.. +.+++.+|=-.|.....+..+++
T Consensus 156 n~P---~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~ 197 (314)
T 3qze_A 156 NVP---GRTSCDMLPETVERLS-KVPNIIGIKEATGDLQRAKEVIE 197 (314)
T ss_dssp ECH---HHHSCCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHHH
T ss_pred eCc---cccCCCCCHHHHHHHh-cCCCEEEEEcCCCCHHHHHHHHH
Confidence 321 2222234455444444 44554444434444445544443
No 236
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=59.11 E-value=71 Score=29.89 Aligned_cols=68 Identities=12% Similarity=0.202 Sum_probs=47.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCCeEEEecC---CCH-HHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 152 GVDLEKLKDFHRRRLQVLVESGPDLLAFETI---PNK-LEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 152 ~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~---~~~-~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
..+.+.++..++-. |.+..||.+++-.| .+. .-++++++++++.+.++|+++.+ .|+..++..+
T Consensus 292 ~a~~~~~~~~~~~i---l~d~~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl---------~G~n~~~g~~ 359 (388)
T 2nu8_B 292 GATKERVTEAFKII---LSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRL---------EGNNAELGAK 359 (388)
T ss_dssp CCCHHHHHHHHHHH---HTSTTCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------ESTTHHHHHH
T ss_pred CCCHHHHHHHHHHH---hcCCCCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEe---------CCCCHHHHHH
Confidence 35666665555522 45688999887543 443 44678899999865579999866 5788888888
Q ss_pred HHHh
Q 020275 228 IINK 231 (328)
Q Consensus 228 ~~~~ 231 (328)
.+.+
T Consensus 360 ~l~~ 363 (388)
T 2nu8_B 360 KLAD 363 (388)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8765
No 237
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis}
Probab=58.95 E-value=11 Score=35.22 Aligned_cols=54 Identities=26% Similarity=0.407 Sum_probs=35.9
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
+.+|+ ++.++- -+.|||+..| |+ +..+++.|++.+.++++ ++-+|.
T Consensus 65 Lk~~~---~~l~~L-v~~ADVvien-fr--PG~~~rlGl~ye~L~~~---------------------------nP~LIy 110 (359)
T 2g04_A 65 VKTQP---QAMLEL-AAKADVLLDC-FR--PGTCERLGIGPDDCASV---------------------------NPRLIF 110 (359)
T ss_dssp C---C---CTTHHH-HTTCSEEEEC-SC--TTHHHHSSCSHHHHHHH---------------------------CTTCEE
T ss_pred CCCHH---HHHHHH-HHhCCEEEeC-CC--ccHHHHhCCCHHHHHHh---------------------------CCCeEE
Confidence 46676 555553 4669999999 66 67889999987544331 356788
Q ss_pred eecCCccc
Q 020275 130 ASIGSYGA 137 (328)
Q Consensus 130 GsiGP~g~ 137 (328)
.||..||.
T Consensus 111 ~sisGfG~ 118 (359)
T 2g04_A 111 ARITGWGQ 118 (359)
T ss_dssp EEEESSCS
T ss_pred EEEecCCC
Confidence 88877775
No 238
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=58.81 E-value=1.2e+02 Score=28.47 Aligned_cols=93 Identities=13% Similarity=0.214 Sum_probs=54.4
Q ss_pred HHHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.+.++.|.+-+||++=+-+ +.+. ..++.+.++ ++||++|-- . .+=+.+..|++.+.+......+.+
T Consensus 124 ~~svd~l~~~~vd~~KIgS~~~~N~----pLL~~va~~--gKPViLStG-----m-aTl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 124 EGSADLLQSTSPSAFKIASYEINHL----PLLKYVARL--NRPMIFSTA-----G-AEISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp HHHHHHHHTTCCSCEEECGGGTTCH----HHHHHHHTT--CSCEEEECT-----T-CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECcccccCH----HHHHHHHhc--CCeEEEECC-----C-CCHHHHHHHHHHHHHCCCCcEEEE
Confidence 4567777777899986553 3333 233444434 599998862 1 111223356666665433356777
Q ss_pred CCCC--hh----hhHHHHHHHHhhc-CCeEEEEeC
Q 020275 241 NCAP--PQ----FVENLICYFKELT-KKAIVVYPN 268 (328)
Q Consensus 241 NC~~--p~----~~~~~l~~l~~~~-~~pl~~ypN 268 (328)
-|++ |. .=+.++..|++.+ ..|+ .||.
T Consensus 192 hc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~Sd 225 (385)
T 1vli_A 192 HCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSD 225 (385)
T ss_dssp EECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEE
T ss_pred eccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCC
Confidence 8974 32 2234677777777 6888 4665
No 239
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=58.81 E-value=1.1e+02 Score=27.86 Aligned_cols=142 Identities=16% Similarity=0.201 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHhcCCCeE-EEecC---CCHHHHH--------HHHHHHHhcC--CCccEEEEEEecCCCCCCCCCCH
Q 020275 157 KLKDFHRRRLQVLVESGPDLL-AFETI---PNKLEAQ--------ALVELLEEEN--IQIPSWICFSSVDGENAPSGESF 222 (328)
Q Consensus 157 e~~~~h~~qi~~l~~~gvD~i-~~ET~---~~~~E~~--------a~~~~~~~~~--~~~pv~is~~~~~~~~l~~G~~~ 222 (328)
.+.+.....++.+.++|+|.| +++.. -+...-+ .+++.+++.+ .+.| ++-| |. |.
T Consensus 184 ~l~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~-~~-------g~-- 252 (354)
T 3cyv_A 184 KLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLF-TK-------GG-- 252 (354)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEE-CT-------TT--
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEE-CC-------CH--
Confidence 334445556677778999987 45643 2333322 2233333221 0256 3444 32 11
Q ss_pred HHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc-
Q 020275 223 KECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS- 301 (328)
Q Consensus 223 ~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~- 301 (328)
...+..+.+ .+++++++--. ..+..+.+.+ +.-+.++.|- |+. .+. -++++..+.+++.++.
T Consensus 253 ~~~l~~l~~-~g~d~i~~d~~--~dl~~~~~~~----g~~~~l~Gn~----dp~---~l~---~t~e~i~~~v~~~l~~~ 315 (354)
T 3cyv_A 253 GQWLEAMAE-TGCDALGLDWT--TDIADARRRV----GNKVALQGNM----DPS---MLY---APPARIEEEVATILAGF 315 (354)
T ss_dssp TTTHHHHHT-TSCSEEECCTT--SCHHHHHHHH----TTTSEEECCB----CGG---GGG---SCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHh-cCCCEEEeCCC--CCHHHHHHHh----CCCeEEEecC----ChH---HhC---CCHHHHHHHHHHHHHHh
Confidence 113344444 46888887522 1223332333 2224455552 221 122 2688899999998876
Q ss_pred CC---eEEeecCC----CChHHHHHHHHHHhc
Q 020275 302 GA---KLIGGCCR----TTPSTIQAVSKVLKE 326 (328)
Q Consensus 302 G~---~iiGGCCG----t~P~hI~al~~~l~~ 326 (328)
|. -|++--|| |.|++++++.+++++
T Consensus 316 g~~~g~I~~~g~gi~~~~p~env~a~v~~v~~ 347 (354)
T 3cyv_A 316 GHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHR 347 (354)
T ss_dssp TTSSCEEBCBSSCCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCeEEecCCCCCCCCCHHHHHHHHHHHHH
Confidence 65 57777777 478999999988764
No 240
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=58.75 E-value=1e+02 Score=27.63 Aligned_cols=152 Identities=14% Similarity=0.045 Sum_probs=83.1
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|++-|..+== +-+. .-++.+|-.++.+.+++.+. ++-.+|+|
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~Gt--TGE~---~~Ls~eEr~~v~~~~~~~~~-----------------grvpViaG- 86 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGS--TGEA---FVQSLSEREQVLEIVAEEAK-----------------GKIKLIAH- 86 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESST--TTTG---GGSCHHHHHHHHHHHHHHHT-----------------TTSEEEEE-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECee--ccCh---hhCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe-
Confidence 3567888888888999997664421 1111 13465666677666665432 23345565
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC----CCHHHHHHHHHHHHhcCCC-ccEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI----PNKLEAQALVELLEEENIQ-IPSWI 206 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~~~~~~~~~-~pv~i 206 (328)
+|.. +.++. .++++...+.|+|.+++=+= |+.+++..-.+.+.+.. + +|+++
T Consensus 87 vg~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~~lPiil 143 (303)
T 2wkj_A 87 VGCV------------------STAES----QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSA-DGLPMVV 143 (303)
T ss_dssp CCCS------------------SHHHH----HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH-TTCCEEE
T ss_pred cCCC------------------CHHHH----HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhC-CCCCEEE
Confidence 3331 22332 44566667789999877542 46677666665555443 5 89885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLIC 253 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~ 253 (328)
==.. +++.-.-+.+...+.. +.+++.+|=-.|.....+..+++
T Consensus 144 Yn~P---~~tg~~l~~~~~~~La-~~pnIvgiK~s~gd~~~~~~~~~ 186 (303)
T 2wkj_A 144 YNIP---ALSGVKLTLDQINTLV-TLPGVGALXQTSGDLYQMEQIRR 186 (303)
T ss_dssp EECH---HHHCCCCCHHHHHHHH-TSTTEEEEEECCCCHHHHHHHHH
T ss_pred EeCc---cccCCCCCHHHHHHHh-cCCCEEEEeCCCCCHHHHHHHHH
Confidence 3211 1221223454444443 44555554445555555555544
No 241
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=58.75 E-value=47 Score=28.31 Aligned_cols=80 Identities=9% Similarity=0.050 Sum_probs=46.3
Q ss_pred HHHHHHHHhcCCCeEEEecC-----CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceE
Q 020275 163 RRRLQVLVESGPDLLAFETI-----PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNA 237 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-----~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 237 (328)
.+.++.+.++|+|.|-+-++ +.... ..++.+++.. ++|+++..-+ .+.+++-..+. .++++
T Consensus 34 ~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~-~ipv~v~ggi---------~~~~~~~~~l~--~Gad~ 99 (244)
T 2y88_A 34 VDAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGKL-DVQVELSGGI---------RDDESLAAALA--TGCAR 99 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHHC-SSEEEEESSC---------CSHHHHHHHHH--TTCSE
T ss_pred HHHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHhc-CCcEEEECCC---------CCHHHHHHHHH--cCCCE
Confidence 45677888899999987542 22222 3333444432 5898874322 23455444443 36778
Q ss_pred EEECCC---ChhhhHHHHHHHH
Q 020275 238 VGINCA---PPQFVENLICYFK 256 (328)
Q Consensus 238 iGvNC~---~p~~~~~~l~~l~ 256 (328)
|.+... .|+.+..+++.+.
T Consensus 100 V~lg~~~l~~p~~~~~~~~~~g 121 (244)
T 2y88_A 100 VNVGTAALENPQWCARVIGEHG 121 (244)
T ss_dssp EEECHHHHHCHHHHHHHHHHHG
T ss_pred EEECchHhhChHHHHHHHHHcC
Confidence 877774 4666666666654
No 242
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=58.65 E-value=21 Score=33.44 Aligned_cols=50 Identities=10% Similarity=0.096 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhcC--CCeEEEe-----cCCCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 160 DFHRRRLQVLVESG--PDLLAFE-----TIPNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
+.+..+++.|.+.| +|.|-+. ..|+..+++.+++.+...+ +|++|| +.+.
T Consensus 209 ~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~~G--l~i~iTElDi~ 266 (378)
T 1ur1_A 209 EATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLG--LRVHFTSLDVD 266 (378)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHhcC--CeEEEEecccC
Confidence 44556888888888 5999886 4588999999999888764 999998 4443
No 243
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=58.48 E-value=1.1e+02 Score=27.91 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=56.4
Q ss_pred HHHHHHHhcCCCeEEEecCC--------------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP--------------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
+-++.|.++|++.+-+|-.. +..|...-++++++.....+++|.-..+... ...++++++..
T Consensus 120 ~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a----~~gl~~ai~Ra 195 (318)
T 1zlp_A 120 RFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARA----PHGLEEGIRRA 195 (318)
T ss_dssp HHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHH----HHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhh----hcCHHHHHHHH
Confidence 45667778999999999643 3446554555555432234566555442221 11245565443
Q ss_pred Hh--cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 230 NK--SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 230 ~~--~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
.. ..++++|=+-|.. ++.+ +++.+..+.|+++.+-
T Consensus 196 ~Ay~eAGAd~i~~e~~~~~e~~----~~i~~~l~~P~lan~~ 233 (318)
T 1zlp_A 196 NLYKEAGADATFVEAPANVDEL----KEVSAKTKGLRIANMI 233 (318)
T ss_dssp HHHHHTTCSEEEECCCCSHHHH----HHHHHHSCSEEEEEEC
T ss_pred HHHHHcCCCEEEEcCCCCHHHH----HHHHHhcCCCEEEEec
Confidence 22 2578999999974 3444 4444445689877554
No 244
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=58.34 E-value=46 Score=30.04 Aligned_cols=27 Identities=22% Similarity=0.223 Sum_probs=20.9
Q ss_pred CCChHHHHHHHHHHHHhccceeecCC-cC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSS-YQ 77 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnT-y~ 77 (328)
+++++ +.+.-+-=.+||||.|.|+| |.
T Consensus 185 Lt~ee-i~~A~~ia~eaGADfVKTSTGf~ 212 (288)
T 3oa3_A 185 LTADE-IIAGCVLSSLAGADYVKTSTGFN 212 (288)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEEECCCSSS
T ss_pred CCHHH-HHHHHHHHHHcCCCEEEcCCCCC
Confidence 45444 55677778899999999998 75
No 245
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=58.33 E-value=42 Score=29.40 Aligned_cols=119 Identities=11% Similarity=0.119 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHH----HH-HHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKL----EA-QALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~----E~-~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
++.+++.+.|++. ..+.|++++|+-..+. +- ....+.++.. +.||++-.... ..++.+++.
T Consensus 111 ~~~~~i~~~~~~l-----~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l--~~pVILV~~~~-------~g~i~~~~l 176 (251)
T 3fgn_A 111 PARDQIVRLIADL-----DRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDV--AAAALVVVTAD-------LGTLNHTKL 176 (251)
T ss_dssp CCHHHHHHHHHTT-----CCTTCEEEEECSSSTTCEEETTTEEHHHHHHHT--TCEEEEEECSS-------TTHHHHHHH
T ss_pred CCHHHHHHHHHHH-----HhcCCEEEEECCCCCcCCcCcccchHHHHHHHc--CCCEEEEEcCC-------CccHHHHHH
Confidence 4666666655532 3578999999975542 21 2345566655 48998666432 123444433
Q ss_pred H---HH-hcCCceEEEECCCC--hhh-hHHHHHHHHhhcCCe-EEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHH
Q 020275 228 I---IN-KSGKVNAVGINCAP--PQF-VENLICYFKELTKKA-IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWR 299 (328)
Q Consensus 228 ~---~~-~~~~~~~iGvNC~~--p~~-~~~~l~~l~~~~~~p-l~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (328)
. +. ....+.++-+|... |+. ....++.+.+. .| |++-|... ..+++++|.+.+..|.
T Consensus 177 t~~~l~~~g~~i~GvIlN~v~~~~~~~~~~~~~~le~~--vpvLG~iP~~~-------------~~l~~~~~~~~~~~~~ 241 (251)
T 3fgn_A 177 TLEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALARI--AMVRAALPAGA-------------ASLDAGDFAAMSAAAF 241 (251)
T ss_dssp HHHHHHHTTCCEEEEEEEEECSSCCHHHHHHHHHHHHH--SCEEEEEETTG-------------GGCCHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCEEEEEEECCCCchhhhhhhHHHHHHHh--CCEEEEeeCCC-------------CcCCHHHHHHHHhccc
Confidence 2 22 22467788899973 322 23345556555 55 45666421 1146888999998885
Q ss_pred H
Q 020275 300 D 300 (328)
Q Consensus 300 ~ 300 (328)
.
T Consensus 242 ~ 242 (251)
T 3fgn_A 242 D 242 (251)
T ss_dssp C
T ss_pred c
Confidence 3
No 246
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.30 E-value=58 Score=30.20 Aligned_cols=88 Identities=8% Similarity=0.017 Sum_probs=59.4
Q ss_pred HHHHHHH-hcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 164 RRLQVLV-ESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 164 ~qi~~l~-~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
+.+.++. ..|+.+|. ...+.++....++.+++.+ .+|+.+.+.+.+ .+.++.+.+ .+++.|-||+
T Consensus 60 ~lA~avA~~GGlgii~--~~~s~e~~~~~I~~vk~~~-~~pvga~ig~~~----------~e~a~~l~e-aGad~I~ld~ 125 (361)
T 3khj_A 60 LMAVGMARLGGIGIIH--KNMDMESQVNEVLKVKNSG-GLRVGAAIGVNE----------IERAKLLVE-AGVDVIVLDS 125 (361)
T ss_dssp HHHHHHHHTTCEEEEC--SSSCHHHHHHHHHHHHHTT-CCCCEEEECTTC----------HHHHHHHHH-TTCSEEEECC
T ss_pred HHHHHHHHcCCCeEEe--cCCCHHHHHHHHHHHHhcc-CceEEEEeCCCH----------HHHHHHHHH-cCcCeEEEeC
Confidence 3455454 45566554 4567888888888888765 689988885421 344444444 4688898998
Q ss_pred CC--hhhhHHHHHHHHhhcCCeEEE
Q 020275 243 AP--PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 243 ~~--p~~~~~~l~~l~~~~~~pl~~ 265 (328)
.+ +..+...++.+++..+.|+++
T Consensus 126 a~G~~~~~~~~i~~i~~~~~~~Viv 150 (361)
T 3khj_A 126 AHGHSLNIIRTLKEIKSKMNIDVIV 150 (361)
T ss_dssp SCCSBHHHHHHHHHHHHHCCCEEEE
T ss_pred CCCCcHHHHHHHHHHHHhcCCcEEE
Confidence 74 666777888887776777776
No 247
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=58.27 E-value=86 Score=27.15 Aligned_cols=101 Identities=13% Similarity=0.139 Sum_probs=63.4
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCC---------CCCCCCCCHHHHHHHHHhcC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDG---------ENAPSGESFKECLDIINKSG 233 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~---------~~l~~G~~~~~~~~~~~~~~ 233 (328)
.++++.+++.|+|-+.+-|..- ..-.-+-+++++++ +..+++++.+..+ .+-..+.++.+.+..+.+ .
T Consensus 87 ~e~~~~~l~~GadkVii~t~a~-~~p~li~e~~~~~g-~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~-~ 163 (243)
T 4gj1_A 87 KEEVKALLDCGVKRVVIGSMAI-KDATLCLEILKEFG-SEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSN-K 163 (243)
T ss_dssp HHHHHHHHHTTCSEEEECTTTT-TCHHHHHHHHHHHC-TTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHT-T
T ss_pred HHHHHHHHHcCCCEEEEccccc-cCCchHHHHHhccc-CceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhh-c
Confidence 5678888899999999987543 22233455666666 5678888876322 123455677788887765 5
Q ss_pred CceEEEECCCChhh-----hHHHHHHHHhhc-CCeEEEE
Q 020275 234 KVNAVGINCAPPQF-----VENLICYFKELT-KKAIVVY 266 (328)
Q Consensus 234 ~~~~iGvNC~~p~~-----~~~~l~~l~~~~-~~pl~~y 266 (328)
++.-|-+++..-+- =..+++.+.+.. +.|+++-
T Consensus 164 g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~~~ipvias 202 (243)
T 4gj1_A 164 GLKHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQAS 202 (243)
T ss_dssp TCCEEEEEETTC-----CCCHHHHHHHHHHCTTSEEEEE
T ss_pred CCcEEEeeeecccccccCCCHHHHHHHHHhcCCCCEEEE
Confidence 77788888764221 125677777665 4687763
No 248
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=58.19 E-value=1e+02 Score=28.67 Aligned_cols=66 Identities=8% Similarity=0.046 Sum_probs=42.8
Q ss_pred HHHHHHHHHhcCCCeEEEec-CCCHHHHHHHHHHHHhcCCCccEEEE-EEecCCCCCCCCCCHHHHHHHHHhcCCceEEE
Q 020275 162 HRRRLQVLVESGPDLLAFET-IPNKLEAQALVELLEEENIQIPSWIC-FSSVDGENAPSGESFKECLDIINKSGKVNAVG 239 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iG 239 (328)
..++++.++++|+|+|.+-+ ..+...+...++.+++...++|+++- + .+.+++...++ .++++|-
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V-----------~T~e~A~~a~~--aGaD~I~ 167 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNV-----------ATYAGADYLAS--CGADIIK 167 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEE-----------CSHHHHHHHHH--TTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCc-----------CCHHHHHHHHH--cCCCEEE
Confidence 35688999999999988764 33334444556667764225899873 3 35666666554 3677776
Q ss_pred E
Q 020275 240 I 240 (328)
Q Consensus 240 v 240 (328)
+
T Consensus 168 V 168 (361)
T 3r2g_A 168 A 168 (361)
T ss_dssp E
T ss_pred E
Confidence 6
No 249
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=58.05 E-value=1.4e+02 Score=28.84 Aligned_cols=65 Identities=12% Similarity=0.143 Sum_probs=36.3
Q ss_pred HHHHHHHhcCCCeEEEecC----------------CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFETI----------------PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~----------------~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
+.++.+.++|+|+|.+ ++ |...-+..+.++.+.. ++|++.+= -+. +..+++.
T Consensus 308 ~~a~~l~~aGad~I~v-g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~ipVia~G------GI~---~~~di~k 375 (514)
T 1jcn_A 308 AQAKNLIDAGVDGLRV-GMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GVPIIADG------GIQ---TVGHVVK 375 (514)
T ss_dssp HHHHHHHHHTCSEEEE-CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TCCEEEES------CCC---SHHHHHH
T ss_pred HHHHHHHHcCCCEEEE-CCCCCcccccccccCCCccchhHHHHHHHHHhhC--CCCEEEEC------CCC---CHHHHHH
Confidence 3577788899999977 32 1122222233333333 58988543 122 3456666
Q ss_pred HHHhcCCceEEEECC
Q 020275 228 IINKSGKVNAVGINC 242 (328)
Q Consensus 228 ~~~~~~~~~~iGvNC 242 (328)
.+.. +++++++-=
T Consensus 376 ala~--GAd~V~iG~ 388 (514)
T 1jcn_A 376 ALAL--GASTVMMGS 388 (514)
T ss_dssp HHHT--TCSEEEEST
T ss_pred HHHc--CCCeeeECH
Confidence 6653 577777654
No 250
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=58.05 E-value=1.2e+02 Score=28.15 Aligned_cols=139 Identities=15% Similarity=0.154 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEec----------CCCHHHHHHHHHHHHhc------CCCccEEEEEEecCCCCCCCCCCHH
Q 020275 160 DFHRRRLQVLVESGPDLLAFET----------IPNKLEAQALVELLEEE------NIQIPSWICFSSVDGENAPSGESFK 223 (328)
Q Consensus 160 ~~h~~qi~~l~~~gvD~i~~ET----------~~~~~E~~a~~~~~~~~------~~~~pv~is~~~~~~~~l~~G~~~~ 223 (328)
+.|.+.++.+. ..+|.|-+.- +.+.+.+..+++++++. ..++|+++-++..- +.+.+.
T Consensus 164 ~dy~~~~~~~~-~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~-----~~~~~~ 237 (367)
T 3zwt_A 164 EDYAEGVRVLG-PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDL-----TSQDKE 237 (367)
T ss_dssp HHHHHHHHHHG-GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCC-----CHHHHH
T ss_pred HHHHHHHHHHh-hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCC-----CHHHHH
Confidence 33555666665 4689887651 23355566667666542 13689999886421 112345
Q ss_pred HHHHHHHhcCCceEEEE-CCCC--h--------------------hhhHHHHHHHHhhc--CCeEEEEeCCCCccCCccc
Q 020275 224 ECLDIINKSGKVNAVGI-NCAP--P--------------------QFVENLICYFKELT--KKAIVVYPNSGEVWDGRAK 278 (328)
Q Consensus 224 ~~~~~~~~~~~~~~iGv-NC~~--p--------------------~~~~~~l~~l~~~~--~~pl~~ypN~g~~~d~~~~ 278 (328)
+.++.+.+ .++++|-+ |.+. + ......+.++++.. +.|++. |+|.
T Consensus 238 ~ia~~~~~-aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~--~GGI------- 307 (367)
T 3zwt_A 238 DIASVVKE-LGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIG--VGGV------- 307 (367)
T ss_dssp HHHHHHHH-HTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE--ESSC-------
T ss_pred HHHHHHHH-cCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEE--ECCC-------
Confidence 56666554 46777654 5431 1 11235677777776 457654 4442
Q ss_pred cccCCCCCChhHHHHHHHHHHHcCCeEEeecCCC---ChHHHHHHHHHHh
Q 020275 279 KWLPSKCLGDGKFESFATRWRDSGAKLIGGCCRT---TPSTIQAVSKVLK 325 (328)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCGt---~P~hI~al~~~l~ 325 (328)
.++++.. +.+..|+..|.-+-+. +|.-++.|.+.+.
T Consensus 308 -------~s~~da~----~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~ 346 (367)
T 3zwt_A 308 -------SSGQDAL----EKIRAGASLVQLYTALTFWGPPVVGKVKRELE 346 (367)
T ss_dssp -------CSHHHHH----HHHHHTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred -------CCHHHHH----HHHHcCCCEEEECHHHHhcCcHHHHHHHHHHH
Confidence 1233333 3445688777765554 5887777776654
No 251
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=58.04 E-value=1.3e+02 Score=28.76 Aligned_cols=137 Identities=15% Similarity=0.102 Sum_probs=79.2
Q ss_pred HHHHHHhcCCCeEEEe-cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC
Q 020275 165 RLQVLVESGPDLLAFE-TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA 243 (328)
Q Consensus 165 qi~~l~~~gvD~i~~E-T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~ 243 (328)
|+......|+|.+++- ++-+..+++..++.+++.+ +-+++-+. +.+++-+.+. .++..||+|=.
T Consensus 122 Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lg--m~~LvEvh-----------~~eE~~~A~~--lga~iIGinnr 186 (452)
T 1pii_A 122 QIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLE--MGVLTEVS-----------NEEEQERAIA--LGAKVVGINNR 186 (452)
T ss_dssp HHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTT--CEEEEEEC-----------SHHHHHHHHH--TTCSEEEEESE
T ss_pred HHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcC--CeEEEEeC-----------CHHHHHHHHH--CCCCEEEEeCC
Confidence 6666778999998765 6666678899999998875 77776663 3466666554 36789999973
Q ss_pred C-----h--hhhHHHHHHHHhhcCCeEEEEeCCCCc-c-CCc-----cccccCCCC-CChhHHHHHHHHHHHcCCeEEee
Q 020275 244 P-----P--QFVENLICYFKELTKKAIVVYPNSGEV-W-DGR-----AKKWLPSKC-LGDGKFESFATRWRDSGAKLIGG 308 (328)
Q Consensus 244 ~-----p--~~~~~~l~~l~~~~~~pl~~ypN~g~~-~-d~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~G~~iiGG 308 (328)
. + +....+++.+.. +.+++.- +|.. . |-. ....+-++. +.+++..+.++++...-++|
T Consensus 187 ~L~t~~~dl~~~~~L~~~ip~--~~~vIaE--sGI~t~edv~~~~~~a~avLVGealmr~~d~~~~~~~l~~~~~KI--- 259 (452)
T 1pii_A 187 DLRDLSIDLNRTRELAPKLGH--NVTVISE--SGINTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKV--- 259 (452)
T ss_dssp ETTTTEECTHHHHHHHHHHCT--TSEEEEE--SCCCCHHHHHHHTTTCSEEEECHHHHTCSCHHHHHHHHHHCSCEE---
T ss_pred CCCCCCCCHHHHHHHHHhCCC--CCeEEEE--CCCCCHHHHHHHHHhCCEEEEcHHHcCCcCHHHHHHHHHHHhccc---
Confidence 2 2 233334333321 2344443 3321 0 000 000111111 13445666677776655665
Q ss_pred cCCCChHHHHHHHHH
Q 020275 309 CCRTTPSTIQAVSKV 323 (328)
Q Consensus 309 CCGt~P~hI~al~~~ 323 (328)
|.=|+|+++++..++
T Consensus 260 CGit~~eda~~a~~~ 274 (452)
T 1pii_A 260 CGLTRGQDAKAAYDA 274 (452)
T ss_dssp CCCCSHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHhc
Confidence 555788888877654
No 252
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=57.69 E-value=1.1e+02 Score=27.58 Aligned_cols=152 Identities=12% Similarity=0.067 Sum_probs=84.7
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+= . .-++.+|-.++.+.+++.+. ++-.+|+|
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE-~-----~~Ls~~Er~~v~~~~~~~~~-----------------grvpviaG 83 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSE-Q-----FAITDDERDVLTRTILEHVA-----------------GRVPVIVT 83 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGT-G-----GGSCHHHHHHHHHHHHHHHT-----------------TSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC-c-----ccCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe
Confidence 35678888888889999955543 3221 1 13455666677666665431 23345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec-------CCCHHHHHHHHHHHHhcCCCcc
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET-------IPNKLEAQALVELLEEENIQIP 203 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET-------~~~~~E~~a~~~~~~~~~~~~p 203 (328)
. |.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|
T Consensus 84 v-g~~------------------~t~~a----i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~-~lP 139 (309)
T 3fkr_A 84 T-SHY------------------STQVC----AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAI-AIP 139 (309)
T ss_dssp C-CCS------------------SHHHH----HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHC-SSC
T ss_pred c-CCc------------------hHHHH----HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhc-CCC
Confidence 4 331 22333 4466667788999998764 245677776666666554 799
Q ss_pred EEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC-hhhhHHHHHH
Q 020275 204 SWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP-PQFVENLICY 254 (328)
Q Consensus 204 v~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~-p~~~~~~l~~ 254 (328)
+++== +. . +.-.-+.+...+..++.+++.+|=..|+. ...+..+++.
T Consensus 140 iilYn-~P--~-tg~~l~~~~~~~La~~~pnIvgiK~~~~~~~~~~~~~~~~ 187 (309)
T 3fkr_A 140 IMVQD-AP--A-SGTALSAPFLARMAREIEQVAYFXIETPGAANKLRELIRL 187 (309)
T ss_dssp EEEEE-CG--G-GCCCCCHHHHHHHHHHSTTEEEEEECSSSHHHHHHHHHHH
T ss_pred EEEEe-CC--C-CCCCCCHHHHHHHHhhCCCEEEEECCCcchHHHHHHHHHh
Confidence 88532 22 1 22223444444444334555444434654 3455555544
No 253
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=57.62 E-value=1.5e+02 Score=29.36 Aligned_cols=112 Identities=16% Similarity=0.146 Sum_probs=66.8
Q ss_pred CCCHHHHH---HHHHHHHHHHHhcCCCeEEEecC----------C-----------C-HHH---HHHHHHHHHh-cCCCc
Q 020275 152 GVDLEKLK---DFHRRRLQVLVESGPDLLAFETI----------P-----------N-KLE---AQALVELLEE-ENIQI 202 (328)
Q Consensus 152 ~~~~~e~~---~~h~~qi~~l~~~gvD~i~~ET~----------~-----------~-~~E---~~a~~~~~~~-~~~~~ 202 (328)
.++.+|+. +.|.+.++...++|.|.|=+--- | + ... +..+++++++ .+.+.
T Consensus 130 ~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~ 209 (671)
T 1ps9_A 130 ELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDF 209 (671)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 46666654 55666677778899999844210 1 1 122 3445566665 35578
Q ss_pred cEEEEEEecCCCCCCCCCCHHHHHHHHHh--cCCceEEEEC-----CCCh--------hhhHHHHHHHHhhcCCeEEE
Q 020275 203 PSWICFSSVDGENAPSGESFKECLDIINK--SGKVNAVGIN-----CAPP--------QFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 203 pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~~iGvN-----C~~p--------~~~~~~l~~l~~~~~~pl~~ 265 (328)
|+++-++..+- ...|.++++++..+.. ..+++.|.+- ...| ......++.+++..+.|+++
T Consensus 210 ~v~vrls~~~~--~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~ 285 (671)
T 1ps9_A 210 IIIYRLSMLDL--VEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVT 285 (671)
T ss_dssp EEEEEEEEECC--STTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEE
T ss_pred eEEEEECcccc--CCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEE
Confidence 99998887543 2357777776554422 2467777652 1111 23356778888888889765
No 254
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=57.54 E-value=44 Score=28.60 Aligned_cols=96 Identities=8% Similarity=-0.052 Sum_probs=55.0
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCC-CC-----CCCCCHHHHHHHHHhcCCceEE
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGE-NA-----PSGESFKECLDIINKSGKVNAV 238 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~-~l-----~~G~~~~~~~~~~~~~~~~~~i 238 (328)
+++.+.+.|+|.+.+-+.. +.+-..+.++ ++.+ ..+++++.++.+. .+ .++.+..+.+..+.+ .++..|
T Consensus 87 ~~~~~~~~Gad~V~lg~~~-l~~p~~~~~~-~~~g--~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~-~G~~~i 161 (241)
T 1qo2_A 87 YAEKLRKLGYRRQIVSSKV-LEDPSFLKSL-REID--VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKE-YGLEEI 161 (241)
T ss_dssp HHHHHHHTTCCEEEECHHH-HHCTTHHHHH-HTTT--CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHT-TTCCEE
T ss_pred HHHHHHHCCCCEEEECchH-hhChHHHHHH-HHcC--CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHh-CCCCEE
Confidence 5666667899999876532 1111223333 4443 3456666664311 11 133467777666654 467788
Q ss_pred EECCCChhh-----hHHHHHHHHhhcCCeEEE
Q 020275 239 GINCAPPQF-----VENLICYFKELTKKAIVV 265 (328)
Q Consensus 239 GvNC~~p~~-----~~~~l~~l~~~~~~pl~~ 265 (328)
.++-...+. =..+++++.+..+.|+++
T Consensus 162 ~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia 193 (241)
T 1qo2_A 162 VHTEIEKDGTLQEHDFSLTKKIAIEAEVKVLA 193 (241)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHTCEEEE
T ss_pred EEEeecccccCCcCCHHHHHHHHHhcCCcEEE
Confidence 887654322 146777887777888765
No 255
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=57.47 E-value=62 Score=27.39 Aligned_cols=85 Identities=16% Similarity=0.268 Sum_probs=50.1
Q ss_pred HHHHHHHHhcCCCeEEEe-----cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceE
Q 020275 163 RRRLQVLVESGPDLLAFE-----TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNA 237 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 237 (328)
.+.++.+.+.|+|+|-+- .+++.......++.+++.. +.|+.+-+.+.+ ..+.++.+.+ .++++
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~-~~~~~v~l~vnd---------~~~~v~~~~~-~Gad~ 94 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT-DLPLDVHLMIVE---------PDQRVPDFIK-AGADI 94 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC-CSCEEEEEESSS---------HHHHHHHHHH-TTCSE
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc-CCcEEEEEEecC---------HHHHHHHHHH-cCCCE
Confidence 567888889999998663 2344322233445556543 578888877654 2344544443 46777
Q ss_pred EEECCC--ChhhhHHHHHHHHhh
Q 020275 238 VGINCA--PPQFVENLICYFKEL 258 (328)
Q Consensus 238 iGvNC~--~p~~~~~~l~~l~~~ 258 (328)
|-+-.. .++....+++.++..
T Consensus 95 v~vh~~~~~~~~~~~~~~~~~~~ 117 (230)
T 1rpx_A 95 VSVHCEQSSTIHLHRTINQIKSL 117 (230)
T ss_dssp EEEECSTTTCSCHHHHHHHHHHT
T ss_pred EEEEecCccchhHHHHHHHHHHc
Confidence 766665 444455566666543
No 256
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=57.22 E-value=22 Score=33.82 Aligned_cols=50 Identities=10% Similarity=0.099 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhcCC--CeEEEecC-----CCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 160 DFHRRRLQVLVESGP--DLLAFETI-----PNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 160 ~~h~~qi~~l~~~gv--D~i~~ET~-----~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
+.+...++.|.+.|+ |.|-+..- |++.+++..++.+.+. ++|++|+ +.+.
T Consensus 183 ~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~l~~~a~~--g~~v~iTEldv~ 240 (436)
T 2d1z_A 183 QGVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAAL--GVDVAITELDIQ 240 (436)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTT--TCEEEEEEEEET
T ss_pred HHHHHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHHHHHHHHc--CCeEEEeecchh
Confidence 344567888877775 99977432 5567888888888766 4999998 4443
No 257
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=57.07 E-value=1.2e+02 Score=28.00 Aligned_cols=154 Identities=12% Similarity=0.089 Sum_probs=89.2
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCC----Chhh---------------HHhCCCCHHHHHHHHHHHHHHHHHHHHh
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQA----TIPG---------------FLSRGLSIEEAESLLEKSVTLAVEARDK 110 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~a----s~~~---------------l~~~g~~~~~~~~l~~~av~lA~~a~~~ 110 (328)
..+.|..+++-+.--+||||+|.-=||.. ++.. ++..+++. ...+..++++++
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~--------e~~~~L~~~~~~ 102 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNE--------EDEIKLKEYVES 102 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCH--------HHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCH--------HHHHHHHHHHHH
Confidence 45678888888889999999988666653 3322 11223332 233334444443
Q ss_pred hhhhhccCCCCCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec--CCCHHHH
Q 020275 111 FWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET--IPNKLEA 188 (328)
Q Consensus 111 ~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET--~~~~~E~ 188 (328)
+ .+.+.-++ + + ...++.|.+-++|++=+-+ +.+..
T Consensus 103 ~-------------Gi~~~st~----------------~----d--------~~svd~l~~~~v~~~KI~S~~~~n~~-- 139 (349)
T 2wqp_A 103 K-------------GMIFISTL----------------F----S--------RAAALRLQRMDIPAYKIGSGECNNYP-- 139 (349)
T ss_dssp T-------------TCEEEEEE----------------C----S--------HHHHHHHHHHTCSCEEECGGGTTCHH--
T ss_pred h-------------CCeEEEee----------------C----C--------HHHHHHHHhcCCCEEEECcccccCHH--
Confidence 2 23333332 1 2 4567777777899986653 33432
Q ss_pred HHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHH---HHHHHHHhcCCceEEEECCCC--hh----hhHHHHHHHHhhc
Q 020275 189 QALVELLEEENIQIPSWICFSSVDGENAPSGESFK---ECLDIINKSGKVNAVGINCAP--PQ----FVENLICYFKELT 259 (328)
Q Consensus 189 ~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~---~~~~~~~~~~~~~~iGvNC~~--p~----~~~~~l~~l~~~~ 259 (328)
.++.+.++ ++|+++|-- ..+++ .|++.+.+... ..+.+-|+. |. .=+.++..|++.+
T Consensus 140 --LL~~va~~--gkPviLstG---------mat~~Ei~~Ave~i~~~G~-~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f 205 (349)
T 2wqp_A 140 --LIKLVASF--GKPIILSTG---------MNSIESIKKSVEIIREAGV-PYALLHCTNIYPTPYEDVRLGGMNDLSEAF 205 (349)
T ss_dssp --HHHHHHTT--CSCEEEECT---------TCCHHHHHHHHHHHHHHTC-CEEEEECCCCSSCCGGGCCTHHHHHHHHHC
T ss_pred --HHHHHHhc--CCeEEEECC---------CCCHHHHHHHHHHHHHcCC-CEEEEeccCCCCCChhhcCHHHHHHHHHHC
Confidence 33444434 599998752 12444 46666655333 567778974 32 2335677788777
Q ss_pred -CCeEEEEeCC
Q 020275 260 -KKAIVVYPNS 269 (328)
Q Consensus 260 -~~pl~~ypN~ 269 (328)
+.|++ ||.=
T Consensus 206 ~~lpVg-~sdH 215 (349)
T 2wqp_A 206 PDAIIG-LSDH 215 (349)
T ss_dssp TTSEEE-EECC
T ss_pred CCCCEE-eCCC
Confidence 78885 6763
No 258
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=56.88 E-value=91 Score=30.77 Aligned_cols=122 Identities=20% Similarity=0.232 Sum_probs=72.6
Q ss_pred CChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 51 KQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 51 ~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
..++..+++ ..-++||+|+|.-.|-+.+... + ++..+..++.| + .-.+|+|
T Consensus 278 v~~d~~eR~-~aLv~AGvD~iviD~ahGhs~~----------v-------~~~i~~ik~~~----------p-~~~viaG 328 (556)
T 4af0_A 278 TRPGDKDRL-KLLAEAGLDVVVLDSSQGNSVY----------Q-------IEFIKWIKQTY----------P-KIDVIAG 328 (556)
T ss_dssp SSHHHHHHH-HHHHHTTCCEEEECCSCCCSHH----------H-------HHHHHHHHHHC----------T-TSEEEEE
T ss_pred cCccHHHHH-HHHHhcCCcEEEEeccccccHH----------H-------HHHHHHHHhhC----------C-cceEEec
Confidence 445544443 5568999999998876644322 1 22333444443 1 2357888
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec---------------CCCHHHHHHHHHHH
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET---------------IPNKLEAQALVELL 195 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET---------------~~~~~E~~a~~~~~ 195 (328)
.+.- .++++.|.++|+|.+-.-- +|.+.-+..+.+++
T Consensus 329 NVaT----------------------------~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a 380 (556)
T 4af0_A 329 NVVT----------------------------REQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFA 380 (556)
T ss_dssp EECS----------------------------HHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHH
T ss_pred cccC----------------------------HHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHH
Confidence 7733 4578889999999995432 45555555555666
Q ss_pred HhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 196 EEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 196 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
++.+ .|+|. |.+- ....+++..+.. ++++|.+--
T Consensus 381 ~~~~--vpvIA-----DGGI----~~sGDi~KAlaa--GAd~VMlGs 414 (556)
T 4af0_A 381 SRFG--IPCIA-----DGGI----GNIGHIAKALAL--GASAVMMGG 414 (556)
T ss_dssp GGGT--CCEEE-----ESCC----CSHHHHHHHHHT--TCSEEEEST
T ss_pred HHcC--CCEEe-----cCCc----CcchHHHHHhhc--CCCEEEEch
Confidence 6664 88873 2221 233467776653 567777654
No 259
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A*
Probab=56.68 E-value=25 Score=33.59 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=28.5
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHH
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAE 94 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~ 94 (328)
+.+|+-.+.+++ |-+.|||++.| |+ +..+++.|++.+.++
T Consensus 74 Lk~~eGr~~l~~--Li~~ADVlien-fr--PGv~erlGL~ye~L~ 113 (428)
T 2vjq_A 74 MKTPEGKELLEQ--MIKKADVMVEN-FG--PGALDRMGFTWEYIQ 113 (428)
T ss_dssp TTSHHHHHHHHH--HHHHCSEEEEC-CC--TTHHHHTTCCHHHHH
T ss_pred CCCHHHHHHHHH--HHHhCCEEEeC-CC--cchHHHcCCCHHHHH
Confidence 566765554443 45669999999 66 678899999875443
No 260
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.86 E-value=51 Score=26.69 Aligned_cols=45 Identities=13% Similarity=0.289 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHhcCCceEEEECCCC---hhhhHHHHHHHHhhc--CCeEEE
Q 020275 220 ESFKECLDIINKSGKVNAVGINCAP---PQFVENLICYFKELT--KKAIVV 265 (328)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~iGvNC~~---p~~~~~~l~~l~~~~--~~pl~~ 265 (328)
.++++.++.+.+ .+++.||+.|.. ...+..+++.++... +.++++
T Consensus 56 ~p~e~lv~aa~~-~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~v 105 (161)
T 2yxb_A 56 QTPEQVAMAAVQ-EDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVL 105 (161)
T ss_dssp CCHHHHHHHHHH-TTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CCHHHHHHHHHh-cCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 688888888876 478999998863 467788888887753 245544
No 261
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=55.85 E-value=1.2e+02 Score=27.68 Aligned_cols=138 Identities=14% Similarity=0.126 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhcCCCeE-EEec---CCCHHHH--------HHHHHHHH-hc---CC-CccEEEEEEecCCCCCCCCCCHH
Q 020275 161 FHRRRLQVLVESGPDLL-AFET---IPNKLEA--------QALVELLE-EE---NI-QIPSWICFSSVDGENAPSGESFK 223 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i-~~ET---~~~~~E~--------~a~~~~~~-~~---~~-~~pv~is~~~~~~~~l~~G~~~~ 223 (328)
.....++.++++|+|.| ++++ +-+.+.- +.+++.++ +. +. +.|++ -|++. . .
T Consensus 198 ~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i-~~~~G--------~--~ 266 (367)
T 1r3s_A 198 ALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMI-IFAKD--------G--H 266 (367)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEE-EEETT--------C--G
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeE-EEcCC--------c--H
Confidence 33444556667999987 4564 3333332 23456665 43 11 26765 45432 1 1
Q ss_pred HHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc-C
Q 020275 224 ECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS-G 302 (328)
Q Consensus 224 ~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 302 (328)
..+..+.+ .+++++++--.. .+..+.+.+ +.-+.++.|- |+ ..+. -++++..+.+++.++. |
T Consensus 267 ~~l~~l~~-~g~d~i~~d~~~--dl~~a~~~~----g~~~~l~Gnl----dp---~~L~---gt~e~i~~~v~~~l~~~g 329 (367)
T 1r3s_A 267 FALEELAQ-AGYEVVGLDWTV--APKKARECV----GKTVTLQGNL----DP---CALY---ASEEEIGQLVKQMLDDFG 329 (367)
T ss_dssp GGHHHHTT-SSCSEEECCTTS--CHHHHHHHH----CSSSEEEEEE----CG---GGGG---SCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHh-cCCCEEEeCCCC--CHHHHHHHc----CCCeEEEeCC----Ch---HHhc---CCHHHHHHHHHHHHHHhC
Confidence 23445544 467888775321 122332222 2224455552 22 1222 2688898888888765 4
Q ss_pred --CeEEeecCC----CChHHHHHHHHHHhc
Q 020275 303 --AKLIGGCCR----TTPSTIQAVSKVLKE 326 (328)
Q Consensus 303 --~~iiGGCCG----t~P~hI~al~~~l~~ 326 (328)
--|++--|| |.|++++++.++++.
T Consensus 330 ~~g~I~~~ghgi~~~~p~env~a~v~~v~~ 359 (367)
T 1r3s_A 330 PHRYIANLGHGLYPDMDPEHVGAFVDAVHK 359 (367)
T ss_dssp SSSEEEEESSCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCeeecCCCCCCCCCCHHHHHHHHHHHHH
Confidence 567887777 467999999988764
No 262
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=55.15 E-value=25 Score=32.93 Aligned_cols=50 Identities=14% Similarity=0.213 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhcCC--CeEEEec-----CCCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 160 DFHRRRLQVLVESGP--DLLAFET-----IPNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 160 ~~h~~qi~~l~~~gv--D~i~~ET-----~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
+.+..+++.|.+.|+ |.|-+.. .|++.+++..++.+...+ +|+||| +.+.
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~lG--lpI~iTElDi~ 269 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAALG--LDNQITELDVS 269 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHHTT--CEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHhcC--CeEEEeecccc
Confidence 455668888888885 9997753 478899999999888775 999999 5554
No 263
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=55.14 E-value=1.3e+02 Score=27.73 Aligned_cols=112 Identities=10% Similarity=0.101 Sum_probs=65.0
Q ss_pred CCCHHHHHH---HHHHHHHHHHhcCCCeEEEecC----------C-----------CH-H---HHHHHHHHHHhc-CCCc
Q 020275 152 GVDLEKLKD---FHRRRLQVLVESGPDLLAFETI----------P-----------NK-L---EAQALVELLEEE-NIQI 202 (328)
Q Consensus 152 ~~~~~e~~~---~h~~qi~~l~~~gvD~i~~ET~----------~-----------~~-~---E~~a~~~~~~~~-~~~~ 202 (328)
.++.+|+.. .|.+.++.+.++|.|.|=+--- | ++ . -+..+++++++. +.+
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE- 228 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-
Confidence 467776664 4555555567899999865210 1 11 1 233455666553 434
Q ss_pred cEEEEEEecCC-CCCCCCCCHHHHHHH---HHhcCCceEEEECCC----ChhhhHHHHHHHHhhcCCeEEE
Q 020275 203 PSWICFSSVDG-ENAPSGESFKECLDI---INKSGKVNAVGINCA----PPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 203 pv~is~~~~~~-~~l~~G~~~~~~~~~---~~~~~~~~~iGvNC~----~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
|+.+-++..+. ..+.+|.++++++.. +.+ .++++|-+-.. .|..-..+++.+++..+.|+++
T Consensus 229 pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~ 298 (365)
T 2gou_A 229 RVGVRLAPLTTLNGTVDADPILTYTAAAALLNK-HRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIY 298 (365)
T ss_dssp GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHH-TTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE
T ss_pred cEEEEEccccccCCCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEE
Confidence 99988876432 123456677665543 333 57888777653 1222235677888888888765
No 264
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=55.05 E-value=80 Score=30.07 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=46.4
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEec-----------CCCCCCCCCC-----HHHHHHHH
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSV-----------DGENAPSGES-----FKECLDII 229 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~-----------~~~~l~~G~~-----~~~~~~~~ 229 (328)
++.+++.|++.+ ++-|..|++.+.+.+++.+...+|+|-+... ....-.-|.+ +.++++.+
T Consensus 125 i~~a~~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~~~~~~srfG~~~~~~e~~~~~~~~ 201 (467)
T 2o0t_A 125 LTAAVKAGVGHI---VVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRV 201 (467)
T ss_dssp HHHHHHHTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHHHH
T ss_pred HHHHHHCCCCEE---EECCHHHHHHHHHHHHhhCCCCeEEEEEcCCCCCCCCcccccCCCCCCcCCcCCHHHHHHHHHHH
Confidence 334445688755 5667888888888777766557788877653 0002234544 34455555
Q ss_pred HhcCCceEEEECCC
Q 020275 230 NKSGKVNAVGINCA 243 (328)
Q Consensus 230 ~~~~~~~~iGvNC~ 243 (328)
.+..++...|+-|.
T Consensus 202 ~~~~~l~l~Gl~~H 215 (467)
T 2o0t_A 202 FATDHLRLVGLHSH 215 (467)
T ss_dssp HHCSSEEEEEEECC
T ss_pred HhCCCCCEEEEEEE
Confidence 55456777888875
No 265
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=55.01 E-value=1.1e+02 Score=27.62 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhcCCCeEEEecC----CCHHHHHHHHHHHHhcCCCcc-EE
Q 020275 161 FHRRRLQVLVESGPDLLAFETI----PNKLEAQALVELLEEENIQIP-SW 205 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~~~~~~~~~~p-v~ 205 (328)
.....++.+.+.|+|++=++.- .+.++++.+++...... +.| |+
T Consensus 178 ~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~-~~P~Vv 226 (304)
T 1to3_A 178 AIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHI-NMPWVI 226 (304)
T ss_dssp HHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTC-CSCEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccC-CCCeEE
Confidence 3455578888899999988873 57788888887655432 588 44
No 266
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=54.81 E-value=69 Score=28.50 Aligned_cols=124 Identities=17% Similarity=0.168 Sum_probs=66.9
Q ss_pred HHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 162 HRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
..+.++.|.++|+|+|=+- .|+ ..-+.||..++++.....+. +
T Consensus 36 ~~~~~~~l~~~GaD~iElG---------------------iPf--------SDP~aDGpvIq~a~~rAL~~-G------- 78 (271)
T 3nav_A 36 SLAIMQTLIDAGADALELG---------------------MPF--------SDPLADGPTIQGANLRALAA-K------- 78 (271)
T ss_dssp HHHHHHHHHHTTCSSEEEE---------------------CCC--------CCGGGCCSHHHHHHHHHHHT-T-------
T ss_pred HHHHHHHHHHcCCCEEEEC---------------------CCC--------CCCCCCCHHHHHHHHHHHHc-C-------
Confidence 3666777888888887432 332 12234777777665433321 2
Q ss_pred CCChhhhHHHHHHHHhh-cCCeEEE--EeCCCCccCCc---------cccccCCCCCChhHHHHHHHHHHHcCCeEEeec
Q 020275 242 CAPPQFVENLICYFKEL-TKKAIVV--YPNSGEVWDGR---------AKKWLPSKCLGDGKFESFATRWRDSGAKLIGGC 309 (328)
Q Consensus 242 C~~p~~~~~~l~~l~~~-~~~pl~~--ypN~g~~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGC 309 (328)
+..+.+...++++++. .+.|+++ |-|--..|... ..+-+--.++.+++..++.....+.|...|==|
T Consensus 79 -~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lv 157 (271)
T 3nav_A 79 -TTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIA 157 (271)
T ss_dssp -CCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEE
T ss_pred -CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 3455666777777765 5567644 65631001000 000000012456666666667777787766666
Q ss_pred CCCC-hHHHHHHHHH
Q 020275 310 CRTT-PSTIQAVSKV 323 (328)
Q Consensus 310 CGt~-P~hI~al~~~ 323 (328)
.-++ ++.|+++.+.
T Consensus 158 ap~t~~eri~~i~~~ 172 (271)
T 3nav_A 158 PPTASDETLRAVAQL 172 (271)
T ss_dssp CTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 6654 4667776654
No 267
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=54.71 E-value=1.2e+02 Score=27.34 Aligned_cols=157 Identities=11% Similarity=0.102 Sum_probs=89.4
Q ss_pred cCCChHHHHHHHHHHHHhc----cceeecCCcC----CChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCC
Q 020275 49 LIKQPHLVKRVHLEYLEAG----ADILVTSSYQ----ATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPG 120 (328)
Q Consensus 49 ll~~Pe~V~~iH~~yl~AG----AdiI~TnTy~----as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~ 120 (328)
.++++|.+.++=+..-++| ..+|..+.|. +|+.+++ |+.. +.+.++.+++++++
T Consensus 50 sies~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~--Glg~-------~~GL~~L~~~~~e~--------- 111 (298)
T 3fs2_A 50 QMETRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAAR--GIGL-------EKALEVFSDLKKEY--------- 111 (298)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC-----------CCH-------HHHHHHHHHHHHHH---------
T ss_pred cCCCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcC--CcCH-------HHHHHHHHHHHHhc---------
Confidence 3789998888777777765 4567777664 3333332 3331 24455566666553
Q ss_pred CCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhc
Q 020275 121 HNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI--PNKLEAQALVELLEEE 198 (328)
Q Consensus 121 ~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~ 198 (328)
.+.++-++ + + ..+++.+.+- +|++-+-.+ .+.. .++.+...
T Consensus 112 ----GLpv~Tev----------------~----D--------~~~v~~l~~~-vd~lkIgA~~~~n~~----LLr~va~~ 154 (298)
T 3fs2_A 112 ----GFPVLTDI----------------H----T--------EEQCAAVAPV-VDVLQIPAFLCRQTD----LLIAAART 154 (298)
T ss_dssp ----CCCEEEEC----------------C----S--------HHHHHHHTTT-CSEEEECGGGTTCHH----HHHHHHHT
T ss_pred ----CCeEEEEe----------------C----C--------HHHHHHHHhh-CCEEEECccccCCHH----HHHHHHcc
Confidence 23333322 1 2 4567777665 999987763 4443 33344444
Q ss_pred CCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC--h-hhh---HHHHHHHHhhcCCeEEEEeC
Q 020275 199 NIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP--P-QFV---ENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 199 ~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~--p-~~~---~~~l~~l~~~~~~pl~~ypN 268 (328)
++||.++=- .-.+=..+..+++.+.+..+...+.+-|+. + ... ...+..+++ +..|+++.|.
T Consensus 155 --gkPVilK~G-----ms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~s 222 (298)
T 3fs2_A 155 --GRVVNVKKG-----QFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDAT 222 (298)
T ss_dssp --TSEEEEECC-----TTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEEHH
T ss_pred --CCcEEEeCC-----CCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcCC
Confidence 599997642 111223456778877664455678888863 2 221 345677777 7889988654
No 268
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=54.65 E-value=1.3e+02 Score=27.48 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=54.4
Q ss_pred ceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe---c-----CCCHHHHHHH---HH
Q 020275 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE---T-----IPNKLEAQAL---VE 193 (328)
Q Consensus 125 ~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E---T-----~~~~~E~~a~---~~ 193 (328)
+.+|-|-|--+.+++.||..|. +.+++ ..+++.+++.|+|+|=+- | ++..+|++-+ ++
T Consensus 41 ~~~vMGIlNvTPDSFsdgg~~~-------~~~~a----~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~ 109 (318)
T 2vp8_A 41 RALIMAIVNRTPDSFYDKGATF-------SDAAA----RDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIE 109 (318)
T ss_dssp SCEEEEEEC---------------------CHHH----HHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCcccCCCccC-------CHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 4578888877778787765432 33443 456777888999998555 2 2336676666 45
Q ss_pred HHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC---hhhhHHHHHHHHhhcCCeEEEEeCCC
Q 020275 194 LLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP---PQFVENLICYFKELTKKAIVVYPNSG 270 (328)
Q Consensus 194 ~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~---p~~~~~~l~~l~~~~~~pl~~ypN~g 270 (328)
++++.- ..+.||+. -...+.+-+.++. +.. .||=++ -+.+.+++.+ .+.|+++.++.|
T Consensus 110 ~l~~~~--~~vpISID---------T~~~~VaeaAl~a--Ga~--iINDVsg~~d~~m~~vaa~----~g~~vVlmh~~G 170 (318)
T 2vp8_A 110 WLRGAY--PDQLISVD---------TWRAQVAKAACAA--GAD--LINDTWGGVDPAMPEVAAE----FGAGLVCAHTGG 170 (318)
T ss_dssp HHHHHS--TTCEEEEE---------CSCHHHHHHHHHH--TCC--EEEETTSSSSTTHHHHHHH----HTCEEEEECC--
T ss_pred HHHhhC--CCCeEEEe---------CCCHHHHHHHHHh--CCC--EEEECCCCCchHHHHHHHH----hCCCEEEECCCC
Confidence 555431 13556773 2223333334443 222 355442 2334444333 368999999876
Q ss_pred C
Q 020275 271 E 271 (328)
Q Consensus 271 ~ 271 (328)
.
T Consensus 171 ~ 171 (318)
T 2vp8_A 171 A 171 (318)
T ss_dssp -
T ss_pred C
Confidence 4
No 269
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=54.45 E-value=47 Score=29.65 Aligned_cols=64 Identities=13% Similarity=0.020 Sum_probs=46.7
Q ss_pred HHHHHHhcCCCeEEEec-CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC
Q 020275 165 RLQVLVESGPDLLAFET-IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA 243 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~ 243 (328)
|+......|+|.+++-+ .-+..+++..++.+++.+ +-+++.+. +.+++-+.+. .++..||+|=.
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh-----------~~eEl~~A~~--~ga~iIGinnr 198 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVH-----------DEAEMERALK--LSSRLLGVNNR 198 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEEC-----------SHHHHHHHTT--SCCSEEEEECB
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeC-----------CHHHHHHHHh--cCCCEEEECCC
Confidence 67777789999988773 556678888899888875 66666652 4567655543 46889999953
No 270
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=54.23 E-value=1.2e+02 Score=27.20 Aligned_cols=149 Identities=17% Similarity=0.160 Sum_probs=71.7
Q ss_pred ceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec---CCC------HHHHHHHHHHH
Q 020275 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET---IPN------KLEAQALVELL 195 (328)
Q Consensus 125 ~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET---~~~------~~E~~a~~~~~ 195 (328)
+.+|-|-|-=+.+++.||..|. +.+.+ ..+++.+++.|+|+|=+-- -|. .+|++-++.++
T Consensus 22 ~~~iMgilNvTPDSFsdgg~~~-------~~~~a----~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi 90 (294)
T 2y5s_A 22 RPLVMGILNATPDSFSDGGRFL-------ARDDA----LRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLV 90 (294)
T ss_dssp SCEEEEEEECCC-----------------CTTHH----HHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCCCcC-------CHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 3578888877778888875442 33333 4567778889999985543 344 56666665555
Q ss_pred HhcC-CCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccC
Q 020275 196 EEEN-IQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWD 274 (328)
Q Consensus 196 ~~~~-~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d 274 (328)
+... .++| ||+. -...+.+-+.++.. ... ||=++.......++... ..+.|+++.++.|...+
T Consensus 91 ~~l~~~~vp--iSID---------T~~~~Va~aAl~aG-a~i---INdVsg~~d~~m~~~~a-~~~~~vVlmh~~G~p~t 154 (294)
T 2y5s_A 91 EALRPLNVP--LSID---------TYKPAVMRAALAAG-ADL---INDIWGFRQPGAIDAVR-DGNSGLCAMHMLGEPQT 154 (294)
T ss_dssp HHHGGGCSC--EEEE---------CCCHHHHHHHHHHT-CSE---EEETTTTCSTTHHHHHS-SSSCEEEEECCCEETTT
T ss_pred HHHhhCCCe--EEEE---------CCCHHHHHHHHHcC-CCE---EEECCCCCchHHHHHHH-HhCCCEEEECCCCCCcc
Confidence 5431 1344 5663 22233333344432 223 44433211223333333 34679999999764221
Q ss_pred Ccccc-ccCCCCCC-----hhHHHHHHHHHHHcCCe
Q 020275 275 GRAKK-WLPSKCLG-----DGKFESFATRWRDSGAK 304 (328)
Q Consensus 275 ~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~G~~ 304 (328)
- + -.+.. -+ .+.+.+.+....+.|+.
T Consensus 155 m---~~~~~~y-~dv~~ev~~~l~~~i~~a~~~Gi~ 186 (294)
T 2y5s_A 155 M---QVGEPDY-GDVVTDVRDFLAARAQALRDAGVA 186 (294)
T ss_dssp T---EECCCCC-SSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred c---cccCCcc-ccHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 1 00110 01 22355566677788985
No 271
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=53.94 E-value=1.2e+02 Score=27.13 Aligned_cols=159 Identities=13% Similarity=0.160 Sum_probs=91.3
Q ss_pred cCCChHHHHHHHHHHHHhc----cceeecCCc----CCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCC
Q 020275 49 LIKQPHLVKRVHLEYLEAG----ADILVTSSY----QATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPG 120 (328)
Q Consensus 49 ll~~Pe~V~~iH~~yl~AG----AdiI~TnTy----~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~ 120 (328)
.++++|.+.++=+..-++| ..+|..+.| ++|+.+++ |+.. +.+.++.+++++++
T Consensus 29 sie~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~--G~g~-------~~GL~~L~~~~~e~--------- 90 (285)
T 3sz8_A 29 VLESLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYR--GVGL-------DEGLKIFAEVKARF--------- 90 (285)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCC--CSCH-------HHHHHHHHHHHHHH---------
T ss_pred cCCCHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcC--CcCH-------HHHHHHHHHHHHhc---------
Confidence 3788998888777777766 456666655 34443322 4432 23455566666543
Q ss_pred CCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhc
Q 020275 121 HNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI--PNKLEAQALVELLEEE 198 (328)
Q Consensus 121 ~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~ 198 (328)
.+.++-++ + + ..+++.+.+. ||++-+-.+ .+.. .++.+...
T Consensus 91 ----Glp~~Tev----------------~----d--------~~~v~~l~~~-vd~lqIgA~~~~n~~----LLr~va~~ 133 (285)
T 3sz8_A 91 ----GVPVITDV----------------H----E--------AEQAAPVAEI-ADVLQVPAFLARQTD----LVVAIAKA 133 (285)
T ss_dssp ----CCCEEEEC----------------C----S--------GGGHHHHHTT-CSEEEECGGGTTCHH----HHHHHHHT
T ss_pred ----CCeEEEEe----------------C----C--------HHHHHHHHHh-CCEEEECccccCCHH----HHHHHHcc
Confidence 23334332 1 1 2356666665 999987753 3443 34444444
Q ss_pred CCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC--h-hh---hHHHHHHHHhhc-CCeEEEEeCC
Q 020275 199 NIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP--P-QF---VENLICYFKELT-KKAIVVYPNS 269 (328)
Q Consensus 199 ~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~--p-~~---~~~~l~~l~~~~-~~pl~~ypN~ 269 (328)
++||.++=- .-.+=..+..+++.+.+..+...+.+-|+. + .. =...+..+++.+ +.|+++.|.-
T Consensus 134 --gkPVilK~G-----~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sH 204 (285)
T 3sz8_A 134 --GKPVNVKKP-----QFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTH 204 (285)
T ss_dssp --SSCEEEECC-----TTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTT
T ss_pred --CCcEEEeCC-----CCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCC
Confidence 599997642 111222345778877654455678888864 2 22 135667777777 4899887763
No 272
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=53.80 E-value=50 Score=29.34 Aligned_cols=27 Identities=19% Similarity=0.137 Sum_probs=21.9
Q ss_pred CCChHHHHHHHHHHHHhccceeecCC-cC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSS-YQ 77 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnT-y~ 77 (328)
++ ++.+.++-+--.+||||.|.|+| |.
T Consensus 170 Lt-~eei~~A~~ia~eaGADfVKTSTGf~ 197 (260)
T 3r12_A 170 LD-TEEKIAACVISKLAGAHFVKTSTGFG 197 (260)
T ss_dssp CC-HHHHHHHHHHHHHTTCSEEECCCSSS
T ss_pred CC-HHHHHHHHHHHHHhCcCEEEcCCCCC
Confidence 44 46677777888999999999999 64
No 273
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=53.46 E-value=15 Score=33.20 Aligned_cols=36 Identities=22% Similarity=0.295 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 164 RRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
++++++.++|+|.|++|-+| .++++.+.+.+ +.|++
T Consensus 183 ~rA~a~~eAGA~~ivlE~vp-~~~a~~it~~l-----~iP~i 218 (281)
T 1oy0_A 183 ADAIAVAEAGAFAVVMEMVP-AELATQITGKL-----TIPTV 218 (281)
T ss_dssp HHHHHHHHHTCSEEEEESCC-HHHHHHHHHHC-----SSCEE
T ss_pred HHHHHHHHcCCcEEEEecCC-HHHHHHHHHhC-----CCCEE
No 274
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=53.20 E-value=1.3e+02 Score=27.08 Aligned_cols=96 Identities=10% Similarity=0.088 Sum_probs=58.0
Q ss_pred HHHHHHhcCCCeEEEecCCC---------------HHHHHHHHHHHHhcCCCccEEEEEE----ecCCCCCCCCCCHHHH
Q 020275 165 RLQVLVESGPDLLAFETIPN---------------KLEAQALVELLEEENIQIPSWICFS----SVDGENAPSGESFKEC 225 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~---------------~~E~~a~~~~~~~~~~~~pv~is~~----~~~~~~l~~G~~~~~~ 225 (328)
-++...++|+|.|-+-.=.| ++.++.+++.+++.+ +.|...+. +.++++ .+++.+
T Consensus 86 ~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G--~~v~~~i~~~~~~~~~~~----~~~~~~ 159 (307)
T 1ydo_A 86 GLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKAN--LTTRAYLSTVFGCPYEKD----VPIEQV 159 (307)
T ss_dssp HHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTBC----CCHHHH
T ss_pred hHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEEEEEEecCCcCCC----CCHHHH
Confidence 36666778999986543222 245567788888776 55544333 233332 344444
Q ss_pred HHH---HHhcCCceEEEEC----CCChhhhHHHHHHHHhhcC-CeEEEEe
Q 020275 226 LDI---INKSGKVNAVGIN----CAPPQFVENLICYFKELTK-KAIVVYP 267 (328)
Q Consensus 226 ~~~---~~~~~~~~~iGvN----C~~p~~~~~~l~~l~~~~~-~pl~~yp 267 (328)
++. +.+ .+++.|.+- ...|..+..+++.+++..+ .||.+..
T Consensus 160 ~~~~~~~~~-~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~ 208 (307)
T 1ydo_A 160 IRLSEALFE-FGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHF 208 (307)
T ss_dssp HHHHHHHHH-HTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEEC
T ss_pred HHHHHHHHh-cCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 443 333 355555544 3359999999999988763 6787766
No 275
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=53.02 E-value=1.1e+02 Score=26.38 Aligned_cols=24 Identities=13% Similarity=0.077 Sum_probs=16.6
Q ss_pred hhhhHHHHHHHHhhcCCeEEE--EeC
Q 020275 245 PQFVENLICYFKELTKKAIVV--YPN 268 (328)
Q Consensus 245 p~~~~~~l~~l~~~~~~pl~~--ypN 268 (328)
++.....++.+++..+.|+++ |.|
T Consensus 79 ~~~~~~~i~~ir~~~~~Pv~~m~~~~ 104 (262)
T 1rd5_A 79 MDAVLEMLREVTPELSCPVVLLSYYK 104 (262)
T ss_dssp HHHHHHHHHHHGGGCSSCEEEECCSH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCc
Confidence 445567778887777778766 556
No 276
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=52.99 E-value=1.2e+02 Score=28.83 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=50.6
Q ss_pred HHHHHHHHHH-hcCCCeEEEecC-------CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhc
Q 020275 161 FHRRRLQVLV-ESGPDLLAFETI-------PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKS 232 (328)
Q Consensus 161 ~h~~qi~~l~-~~gvD~i~~ET~-------~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 232 (328)
.|.+.++.++ +.+||.+++--. .....+..+++++++...++|+++++. .|+..++..+.+.+
T Consensus 355 ~~~~al~~~l~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~--------~g~~~~~~~~~L~~- 425 (457)
T 2csu_A 355 DYYRTAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFM--------AGYVSEKAKELLEK- 425 (457)
T ss_dssp HHHHHHHHHHHSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEE--------CTTTTHHHHHHHHT-
T ss_pred HHHHHHHHHhcCCCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeC--------CCcchHHHHHHHHh-
Confidence 4566677765 478999887532 113445677787777433689998764 34445667777765
Q ss_pred CCceEEEECCCChhhhHHHHHHHHh
Q 020275 233 GKVNAVGINCAPPQFVENLICYFKE 257 (328)
Q Consensus 233 ~~~~~iGvNC~~p~~~~~~l~~l~~ 257 (328)
.++-.+ ..|+....++..+.+
T Consensus 426 ~Gip~~----~spe~Av~al~~l~~ 446 (457)
T 2csu_A 426 NGIPTY----ERPEDVASAAYALVE 446 (457)
T ss_dssp TTCCEE----SSHHHHHHHHHHHHH
T ss_pred CCCCcc----CCHHHHHHHHHHHHH
Confidence 343333 457665565555543
No 277
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=52.98 E-value=1.4e+02 Score=27.31 Aligned_cols=223 Identities=15% Similarity=0.114 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe--e
Q 020275 54 HLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA--S 131 (328)
Q Consensus 54 e~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG--s 131 (328)
|.+.+.-++-++.|-.-|..+---.+........+++ .-++.+|++..+++. .+.+|.. |
T Consensus 58 d~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~---~g~v~rair~iK~~~---------------pdl~vitDvc 119 (323)
T 1l6s_A 58 KHLAREIERIANAGIRSVMTFGISHHTDETGSDAWRE---DGLVARMSRICKQTV---------------PEMIVMSDTC 119 (323)
T ss_dssp GGHHHHHHHHHHHTCCEEEEEEECSSCBSSCGGGGST---TSHHHHHHHHHHHHC---------------TTSEEEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCccccccCCC---CCcHHHHHHHHHHHC---------------CCeEEEEeee
Confidence 4566667788899987555432211111110001111 247777777776542 2244444 4
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCC-CccEEEEEEe
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENI-QIPSWICFSS 210 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~-~~pv~is~~~ 210 (328)
+-||-..-++|---.| .+.-++-.+...+|+-..+++|+|++.==-|.+- .+.+|.+++.+.+. +.|++ |.+.
T Consensus 120 Lc~YT~HGHcGil~~g----~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~v~Im-sYsa 193 (323)
T 1l6s_A 120 FCEYTSHGHCGVLCEH----GVDNDATLENLGKQAVVAAAAGADFIAPSAAMDG-QVQAIRQALDAAGFKDTAIM-SYST 193 (323)
T ss_dssp STTTBSSCCSSCBCSS----SBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTCEEB-CCCE
T ss_pred ccccCCCCceEeccCC----cCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCCceee-ehhH
Confidence 5666544333321112 2566777888888888899999999997666664 56778888887653 34444 4432
Q ss_pred cC------------------CCC--CCCCCCHHHHHHHHH--hcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 211 VD------------------GEN--APSGESFKECLDIIN--KSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 211 ~~------------------~~~--l~~G~~~~~~~~~~~--~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
+- |.+ .+|-..-.++++.+. -..+.+.|.|-=..| .+..++.+++.++.|+.+|--
T Consensus 194 KyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~--YLDIi~~vk~~~~~P~aaYqV 271 (323)
T 1l6s_A 194 KFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGA--YLDIVRELRERTELPIGAYQV 271 (323)
T ss_dssp EBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEESCTT--CHHHHHHHHTTCSSCEEEEEC
T ss_pred HHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcc--hhHHHHHHHHhcCCCeEEEEc
Confidence 11 110 112223445555432 124788888876654 357788888888899999999
Q ss_pred CCCc---cCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 269 SGEV---WDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 269 ~g~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
+|+- .-...+.|+.. ...+.+....++.+|+.+|
T Consensus 272 SGEYAMikaAa~~GwiD~----~~~vlEsl~~~kRAGAd~I 308 (323)
T 1l6s_A 272 SGEYAMIKFAALAGAIDE----EKVVLESLGSIKRAGADLI 308 (323)
T ss_dssp HHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHTTCSEE
T ss_pred CcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 9851 11223446431 2347778888999999876
No 278
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=52.91 E-value=1.4e+02 Score=27.35 Aligned_cols=82 Identities=9% Similarity=0.097 Sum_probs=45.0
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCC--CHHHHHH-HHHh-cCCceEEEEC
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGE--SFKECLD-IINK-SGKVNAVGIN 241 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~--~~~~~~~-~~~~-~~~~~~iGvN 241 (328)
++.+.+.|+|.|-++.-.++.|++.. .+....++ -.++. .+..|+ .+.+.+. .++. ..+-..++..
T Consensus 269 l~~l~~~g~d~i~~d~~~dl~~a~~~------~g~~~~l~--Gnldp--~~L~gt~e~i~~~v~~~l~~~g~~g~I~~~g 338 (367)
T 1r3s_A 269 LEELAQAGYEVVGLDWTVAPKKAREC------VGKTVTLQ--GNLDP--CALYASEEEIGQLVKQMLDDFGPHRYIANLG 338 (367)
T ss_dssp HHHHTTSSCSEEECCTTSCHHHHHHH------HCSSSEEE--EEECG--GGGGSCHHHHHHHHHHHHHHHCSSSEEEEES
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHH------cCCCeEEE--eCCCh--HHhcCCHHHHHHHHHHHHHHhCCCCeeecCC
Confidence 45677889999999977788775433 23223333 33433 333453 2333332 2232 1234567777
Q ss_pred CC-----ChhhhHHHHHHHHh
Q 020275 242 CA-----PPQFVENLICYFKE 257 (328)
Q Consensus 242 C~-----~p~~~~~~l~~l~~ 257 (328)
|. .|+.+..+++..++
T Consensus 339 hgi~~~~p~env~a~v~~v~~ 359 (367)
T 1r3s_A 339 HGLYPDMDPEHVGAFVDAVHK 359 (367)
T ss_dssp SCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
Confidence 84 35777777766654
No 279
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=52.67 E-value=1.2e+02 Score=26.57 Aligned_cols=136 Identities=12% Similarity=0.086 Sum_probs=73.9
Q ss_pred HHHHHHhcCCCeEEE-ecCCC------HHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHH---HHHHHHhcCC
Q 020275 165 RLQVLVESGPDLLAF-ETIPN------KLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKE---CLDIINKSGK 234 (328)
Q Consensus 165 qi~~l~~~gvD~i~~-ET~~~------~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~---~~~~~~~~~~ 234 (328)
.++..++.|+|.+-+ +-+.+ +.|++.+.+++++. ++|+++-.. .++.++.+-.+.+. +++...+ .+
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~--~~~vIi~~~-~~G~~~~~~~s~~~i~~a~~~a~~-~G 172 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKF--DLPLVVESF-PRGGKVVNETAPEIVAYAARIALE-LG 172 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHH--TCCEEEEEC-CCSTTCCCTTCHHHHHHHHHHHHH-HT
T ss_pred HHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHc--CCeEEEEee-CCCCccccCCCHHHHHHHHHHHHH-cC
Confidence 344556689988733 32222 34455666666665 488877632 22223321113333 3333333 47
Q ss_pred ceEEEECCC-ChhhhHHHHHHHHhhcCC-eEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEeecCCC
Q 020275 235 VNAVGINCA-PPQFVENLICYFKELTKK-AIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCRT 312 (328)
Q Consensus 235 ~~~iGvNC~-~p~~~~~~l~~l~~~~~~-pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCGt 312 (328)
++.|++.-. .+ ..++.+.+..+. |+.+-. |. .. -+.+++.+.+.+.++.|++ |=++|.
T Consensus 173 AD~vkt~~~~~~----e~~~~~~~~~~~~pV~asG--Gi----------~~--~~~~~~l~~i~~~~~aGA~--Gvsvgr 232 (263)
T 1w8s_A 173 ADAMKIKYTGDP----KTFSWAVKVAGKVPVLMSG--GP----------KT--KTEEDFLKQVEGVLEAGAL--GIAVGR 232 (263)
T ss_dssp CSEEEEECCSSH----HHHHHHHHHTTTSCEEEEC--CS----------CC--SSHHHHHHHHHHHHHTTCC--EEEESH
T ss_pred CCEEEEcCCCCH----HHHHHHHHhCCCCeEEEEe--CC----------CC--CCHHHHHHHHHHHHHcCCe--EEEEeh
Confidence 888888843 23 334445544455 765532 32 00 1467788888888899997 666665
Q ss_pred ---ChHHHHHHHHHH
Q 020275 313 ---TPSTIQAVSKVL 324 (328)
Q Consensus 313 ---~P~hI~al~~~l 324 (328)
..++++++.+.+
T Consensus 233 aI~~~~dp~~~~~~l 247 (263)
T 1w8s_A 233 NVWQRRDALKFARAL 247 (263)
T ss_dssp HHHTSTTHHHHHHHH
T ss_pred hhcCCcCHHHHHHHH
Confidence 234455555444
No 280
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=52.66 E-value=44 Score=30.67 Aligned_cols=62 Identities=8% Similarity=0.166 Sum_probs=40.2
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
+++..+++|+|+|.+.+| ++.+++.+++.++ + +.++.+| .|-+++.+.++. + .+++.|++-.
T Consensus 243 ea~eAl~aGaD~I~LDn~-~~~~l~~av~~l~--~-~v~ieaS----------GGIt~~~I~~~a-~-tGVD~isvGa 304 (320)
T 3paj_A 243 ELEEAISAGADIIMLDNF-SLEMMREAVKINA--G-RAALENS----------GNITLDNLKECA-E-TGVDYISVGA 304 (320)
T ss_dssp HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT--T-SSEEEEE----------SSCCHHHHHHHH-T-TTCSEEECTH
T ss_pred HHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC--C-CCeEEEE----------CCCCHHHHHHHH-H-cCCCEEEECc
Confidence 344445579999999997 5788888887664 2 3444433 456666555544 3 5788888755
No 281
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=52.65 E-value=99 Score=28.55 Aligned_cols=9 Identities=22% Similarity=0.582 Sum_probs=5.4
Q ss_pred hccceeecC
Q 020275 66 AGADILVTS 74 (328)
Q Consensus 66 AGAdiI~Tn 74 (328)
||+.+|+|=
T Consensus 49 Ag~GLiite 57 (364)
T 1vyr_A 49 ASAGLIISE 57 (364)
T ss_dssp TTSSEEEEE
T ss_pred hcCCEEEEc
Confidence 477766553
No 282
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=52.59 E-value=41 Score=30.75 Aligned_cols=23 Identities=13% Similarity=0.261 Sum_probs=17.8
Q ss_pred HHHHhcCCCeEEEecCCCHHHHH
Q 020275 167 QVLVESGPDLLAFETIPNKLEAQ 189 (328)
Q Consensus 167 ~~l~~~gvD~i~~ET~~~~~E~~ 189 (328)
+.|.+.|+|.+.++.-.++.+++
T Consensus 261 ~~l~~~g~d~~~~d~~~d~~~~~ 283 (353)
T 1j93_A 261 ERLPLTGVDVVSLDWTVDMADGR 283 (353)
T ss_dssp GGGGGGCCSEEECCTTSCHHHHH
T ss_pred HHHHhcCCCEEEeCCCCCHHHHH
Confidence 34557899999999777887754
No 283
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=52.57 E-value=45 Score=29.58 Aligned_cols=31 Identities=26% Similarity=0.374 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEe--cCC
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFE--TIP 183 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~E--T~~ 183 (328)
-+.+++.++-.+.++.|.+.|+|+|++= |.+
T Consensus 47 ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~ 79 (269)
T 3ist_A 47 RDKEEVAKFTWEMTNFLVDRGIKMLVIACNTAT 79 (269)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCcc
Confidence 4889999999999999999999999864 444
No 284
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=52.50 E-value=24 Score=32.12 Aligned_cols=63 Identities=14% Similarity=0.299 Sum_probs=41.3
Q ss_pred HHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 164 RRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
++++..+++|+|+|.+.+| ++++++.+++.++. . +.+..+ .|-+++.+.++. + .+++.|++-.
T Consensus 218 ~e~~eAl~aGaDiImLDn~-s~~~l~~av~~~~~---~--v~leaS--------GGIt~~~i~~~A-~-tGVD~IsvGa 280 (300)
T 3l0g_A 218 SQVEESLSNNVDMILLDNM-SISEIKKAVDIVNG---K--SVLEVS--------GCVNIRNVRNIA-L-TGVDYISIGC 280 (300)
T ss_dssp HHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHTT---S--SEEEEE--------SSCCTTTHHHHH-T-TTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHhhcC---c--eEEEEE--------CCCCHHHHHHHH-H-cCCCEEEeCc
Confidence 3455555689999999997 45888888887652 2 333333 345555555544 3 5788888766
No 285
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=52.34 E-value=1.4e+02 Score=27.39 Aligned_cols=225 Identities=11% Similarity=0.034 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHHhccceeecCCcC-C--ChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQ-A--TIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~-a--s~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
.|.+.+.-++-++.|-.-|..+--- . .........+++ .-++.+|++..+++. .+.+|.
T Consensus 68 id~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~---~g~v~rair~iK~~~---------------pdl~Vi 129 (342)
T 1h7n_A 68 VNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDP---AGPVIQGIKFIREYF---------------PELYII 129 (342)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCT---TSHHHHHHHHHHHHC---------------TTSEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCC---CChHHHHHHHHHHHC---------------CCeEEE
Confidence 3667777788899998755442220 0 011110111121 247777777776542 234455
Q ss_pred e--ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCC--CccEE
Q 020275 130 A--SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENI--QIPSW 205 (328)
Q Consensus 130 G--siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~--~~pv~ 205 (328)
. |+-||-..-++|--.. ...+.-++-.+...+|+-..+++|+|++.==-|.+- .+.+|.+++.+.+. +.|++
T Consensus 130 tDvcLc~YT~HGHcGil~~---~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~~v~Im 205 (342)
T 1h7n_A 130 CDVCLCEYTSHGHCGVLYD---DGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDG-RIRDIKRGLINANLAHKTFVL 205 (342)
T ss_dssp EEECSTTTBTTCCSSCBCT---TSSBCHHHHHHHHHHHHHHHHHHTCSEEEECCCCTT-HHHHHHHHHHHTTCTTTCEEE
T ss_pred EeeecccccCCCceeEECC---CCcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHHCCCccCceEe
Confidence 4 4666654433332110 112566788888888988899999999997666664 56788888888764 35554
Q ss_pred EEEEecCC-------------------CC--CCCCCCHHHHHHHH--HhcCCceEEEECCCChhhhHHHHHHHHhhc-CC
Q 020275 206 ICFSSVDG-------------------EN--APSGESFKECLDII--NKSGKVNAVGINCAPPQFVENLICYFKELT-KK 261 (328)
Q Consensus 206 is~~~~~~-------------------~~--l~~G~~~~~~~~~~--~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~-~~ 261 (328)
|-+.+-- .+ .+|-..-.++++.+ +-..+.+.|.|-=..| .+.+++.+++.+ +.
T Consensus 206 -sYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~--YLDIi~~vk~~~p~~ 282 (342)
T 1h7n_A 206 -SYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTF--YLDIMRDASEICKDL 282 (342)
T ss_dssp -EEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGG--GHHHHHHHHHHTTTS
T ss_pred -echHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecCcc--HHHHHHHHHHhccCC
Confidence 6653211 10 11222344555543 2224788888876654 357788888888 88
Q ss_pred eEEEEeCCCCc---cCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 262 AIVVYPNSGEV---WDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 262 pl~~ypN~g~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
|+.+|--+|+- .-...+.|+.. ...+.+....++.+|+.+|
T Consensus 283 P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~I 326 (342)
T 1h7n_A 283 PICAYHVSGEYAMLHAAAEKGVVDL----KTIAFESHQGFLRAGARLI 326 (342)
T ss_dssp CEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHTTCSEE
T ss_pred CeEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 99999999851 11223346431 2347777888899999876
No 286
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=52.04 E-value=1.3e+02 Score=26.90 Aligned_cols=150 Identities=16% Similarity=0.123 Sum_probs=84.8
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|+|-|..+ |-+ -.. -++.+|-.++.+.+++.+. ++-..|+|
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttG-E~~-----~Lt~~Er~~v~~~~~~~~~-----------------grvpviaG 90 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTG-ESP-----TTTDGEKIELLRAVLEAVG-----------------DRARVIAG 90 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHHHT-----------------TTSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcccc-chh-----hCCHHHHHHHHHHHHHHhC-----------------CCCeEEEe
Confidence 35788888888889999965543 322 111 3455666677666665442 23345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
+|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 91 -vg~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiil 146 (304)
T 3l21_A 91 -AGTY------------------DTAHS----IRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT-ELPMLL 146 (304)
T ss_dssp -CCCS------------------CHHHH----HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC-SSCEEE
T ss_pred -CCCC------------------CHHHH----HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 4432 22333 4566667778999998764 245677666666666543 799986
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLI 252 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l 252 (328)
==. .+++.-.-+.+...+.. +.+++.+|=--|.....+..++
T Consensus 147 Yn~---P~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~ 188 (304)
T 3l21_A 147 YDI---PGRSAVPIEPDTIRALA-SHPNIVGVXDAKADLHSGAQIM 188 (304)
T ss_dssp EEC---HHHHSSCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHH
T ss_pred EeC---ccccCCCCCHHHHHHHh-cCCCEEEEECCCCCHHHHHHHh
Confidence 432 12222233444444443 4455544444444555555555
No 287
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=51.94 E-value=30 Score=26.16 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcC
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEEN 199 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~ 199 (328)
+.+++...-...++.|-+.|+|.|++|.+|....-.++.+-+++..
T Consensus 53 ~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kAA 98 (105)
T 2yv4_A 53 SVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKAS 98 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---C
T ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHhc
Confidence 6677777667788888888999999999999878788877666543
No 288
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=51.65 E-value=1.3e+02 Score=27.19 Aligned_cols=88 Identities=10% Similarity=0.089 Sum_probs=56.8
Q ss_pred HHHHHHhcCC-CeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC
Q 020275 165 RLQVLVESGP-DLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA 243 (328)
Q Consensus 165 qi~~l~~~gv-D~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~ 243 (328)
.+.+..++|. ++|..+ +.+.+++...++.+++.. +.|+.+.+.+.+ ..+.+.++.+.+ .++++|-+++.
T Consensus 28 la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~-~~p~gvnl~~~~-------~~~~~~~~~a~~-~g~d~V~~~~g 97 (332)
T 2z6i_A 28 LAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLT-DKPFGVNIMLLS-------PFVEDIVDLVIE-EGVKVVTTGAG 97 (332)
T ss_dssp HHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHC-CSCEEEEECTTS-------TTHHHHHHHHHH-TTCSEEEECSS
T ss_pred HHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhc-CCCEEEEecCCC-------CCHHHHHHHHHH-CCCCEEEECCC
Confidence 4555666675 666554 457788877777777753 689988886521 236777776665 47899999998
Q ss_pred ChhhhHHHHHHHHhhcCCeEEEE
Q 020275 244 PPQFVENLICYFKELTKKAIVVY 266 (328)
Q Consensus 244 ~p~~~~~~l~~l~~~~~~pl~~y 266 (328)
.|..+...++ .. +.|+++.
T Consensus 98 ~p~~~i~~l~---~~-g~~v~~~ 116 (332)
T 2z6i_A 98 NPSKYMERFH---EA-GIIVIPV 116 (332)
T ss_dssp CGGGTHHHHH---HT-TCEEEEE
T ss_pred ChHHHHHHHH---Hc-CCeEEEE
Confidence 7755444443 32 4555543
No 289
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=51.63 E-value=1.3e+02 Score=26.86 Aligned_cols=95 Identities=9% Similarity=-0.001 Sum_probs=61.9
Q ss_pred HHHHHHHhcCCCeEEEecCC-------------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP-------------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIIN 230 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~-------------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 230 (328)
+-++.|.++|++.+-+|-.. +.+|...-++++++...+.+++|.-..+. .. ..++++++...
T Consensus 101 ~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda---a~--~gl~~ai~Ra~ 175 (287)
T 3b8i_A 101 RTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA---EL--IDVDAVIQRTL 175 (287)
T ss_dssp HHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET---TT--SCHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh---hh--cCHHHHHHHHH
Confidence 35666778999999999654 45677777777777654456776665544 22 34677765442
Q ss_pred h--cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEe
Q 020275 231 K--SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYP 267 (328)
Q Consensus 231 ~--~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~yp 267 (328)
. ..++++|=+-|.. ++ .++++.+..+.|+++-+
T Consensus 176 ay~eAGAd~i~~e~~~~~~----~~~~i~~~~~~P~ii~~ 211 (287)
T 3b8i_A 176 AYQEAGADGICLVGVRDFA----HLEAIAEHLHIPLMLVT 211 (287)
T ss_dssp HHHHTTCSEEEEECCCSHH----HHHHHHTTCCSCEEEEC
T ss_pred HHHHcCCCEEEecCCCCHH----HHHHHHHhCCCCEEEeC
Confidence 2 2578999999974 33 44455555678887444
No 290
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=51.21 E-value=1.3e+02 Score=26.73 Aligned_cols=150 Identities=13% Similarity=0.062 Sum_probs=81.8
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|+|-|..+==..-. .-++.+|-.++.+.+++.+. ++-..|+|.
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~-----~~Ls~~Er~~v~~~~~~~~~-----------------grvpviaGv 76 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGES-----PTLTEEEHKRVVALVAEQAQ-----------------GRVPVIAGA 76 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTG-----GGSCHHHHHHHHHHHHHHHT-----------------TSSCBEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch-----hhCCHHHHHHHHHHHHHHhC-----------------CCCeEEEcc
Confidence 45678888888899999977654211111 13465666677666665432 233456664
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++=
T Consensus 77 -g~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilY 132 (297)
T 2rfg_A 77 -GSN------------------NPVEA----VRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI-DIPIIVY 132 (297)
T ss_dssp -CCS------------------SHHHH----HHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred -CCC------------------CHHHH----HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEE
Confidence 331 22332 4456666778999998754 246677666666655543 6998853
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHH
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENL 251 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~ 251 (328)
=.. +++.-.-+.+...+.. +.+++.+|=-.|.....+..+
T Consensus 133 n~P---~~tg~~l~~~~~~~La-~~pnIvgiKds~gd~~~~~~~ 172 (297)
T 2rfg_A 133 NIP---PRAVVDIKPETMARLA-ALPRIVGVKDATTDLARISRE 172 (297)
T ss_dssp ECH---HHHSCCCCHHHHHHHH-TSTTEEEEEECSCCTTHHHHH
T ss_pred eCc---cccCCCCCHHHHHHHH-cCCCEEEEEeCCCCHHHHHHH
Confidence 211 2211223444444443 444544444344444444443
No 291
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=51.09 E-value=62 Score=27.96 Aligned_cols=48 Identities=13% Similarity=0.212 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCCeEEEe-----cCCCHHHHHHHHHHHHhcCCCccEEEEEEecC
Q 020275 163 RRRLQVLVESGPDLLAFE-----TIPNKLEAQALVELLEEENIQIPSWICFSSVD 212 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~ 212 (328)
.+.++.+ ++|+|++-+- .+|++.....+++.+|+.. ++|+-+=+-+.+
T Consensus 16 ~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~-~~~~dvhLmv~d 68 (231)
T 3ctl_A 16 KEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA-TKPLDCHLMVTR 68 (231)
T ss_dssp HHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC-CSCEEEEEESSC
T ss_pred HHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc-CCcEEEEEEecC
Confidence 4567777 8898876544 3466666667888888764 688888887765
No 292
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=50.79 E-value=1.2e+02 Score=26.04 Aligned_cols=92 Identities=10% Similarity=0.099 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecC-CCC-CCCCCCHHHHHHHHHhcCCceEEE
Q 020275 162 HRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVD-GEN-APSGESFKECLDIINKSGKVNAVG 239 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~-~~~-l~~G~~~~~~~~~~~~~~~~~~iG 239 (328)
..+++++..++|+..|... +.++++ .+|+. .++|++ ...-++ .+. ..-+.+++++-..+. .+++.|-
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~---~~~~i~----~ir~~-v~~Pvi-g~~k~d~~~~~~~I~~~~~~i~~~~~--~Gad~V~ 106 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRIE---GIDNLR----MTRSL-VSVPII-GIIKRDLDESPVRITPFLDDVDALAQ--AGAAIIA 106 (232)
T ss_dssp HHHHHHHHHHTTCSEEEEE---SHHHHH----HHHTT-CCSCEE-EECBCCCSSCCCCBSCSHHHHHHHHH--HTCSEEE
T ss_pred HHHHHHHHHHCCCeEEEEC---CHHHHH----HHHHh-cCCCEE-EEEeecCCCcceEeCccHHHHHHHHH--cCCCEEE
Confidence 4667888889999998875 444433 44443 269983 332222 111 112235666555443 3678888
Q ss_pred ECCC---ChhhhHHHHHHHHhhcCCeEEE
Q 020275 240 INCA---PPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 240 vNC~---~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
++++ .|+.+..+++..++. +.++++
T Consensus 107 l~~~~~~~p~~l~~~i~~~~~~-g~~v~~ 134 (232)
T 3igs_A 107 VDGTARQRPVAVEALLARIHHH-HLLTMA 134 (232)
T ss_dssp EECCSSCCSSCHHHHHHHHHHT-TCEEEE
T ss_pred ECccccCCHHHHHHHHHHHHHC-CCEEEE
Confidence 8886 377888888888664 445544
No 293
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=50.79 E-value=79 Score=29.37 Aligned_cols=144 Identities=9% Similarity=0.082 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHH--------------------HHHHHHHHHhcCCCcc--EEEEEE-ec
Q 020275 155 LEKLKDFHRRRLQVLVESGPDLLAFETIPNKLE--------------------AQALVELLEEENIQIP--SWICFS-SV 211 (328)
Q Consensus 155 ~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E--------------------~~a~~~~~~~~~~~~p--v~is~~-~~ 211 (328)
.+++...+++-++.|.++|+++|=+-- |++.+ +..++++++..-.++| .-|.+. |.
T Consensus 162 ~~~la~a~~~ei~~l~~aG~~~IQiDe-P~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~~~i~~HiC~ 240 (375)
T 1ypx_A 162 ANDLATAYQKAIQAFYDAGCRYLQLDD-TSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICR 240 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEE-CHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEecC-CchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 467778889999999999999874321 22211 2445566555322232 333333 32
Q ss_pred CC---CCCCCCCCHHHHHHHHHhcCCceEEEECCCCh-h-hhHHHHHHHHhh-cCCeEEEEeCCCCccCCccccccCCCC
Q 020275 212 DG---ENAPSGESFKECLDIINKSGKVNAVGINCAPP-Q-FVENLICYFKEL-TKKAIVVYPNSGEVWDGRAKKWLPSKC 285 (328)
Q Consensus 212 ~~---~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p-~-~~~~~l~~l~~~-~~~pl~~ypN~g~~~d~~~~~~~~~~~ 285 (328)
.+ ....+|. +...+..+....++++|.+.+... . .+ ..|+.+... ...-+++++-. ..++
T Consensus 241 gn~~s~~~~~g~-~~~i~~~l~~~~~~d~i~lE~~~~r~g~~-e~L~~~~~~~~~v~lGvvd~~--------~~~~---- 306 (375)
T 1ypx_A 241 GNFRSTWIAEGG-YGPVAETLFGKLNIDGFFLEYDNERSGDF-APLKYVTRPDLKIVLGLITSK--------TGEL---- 306 (375)
T ss_dssp C----------C-CSGGGHHHHTTCCCSEEEEECCSCC---C-CTTCCCCCTTCEEEEEEECSS--------SCC-----
T ss_pred cccCCccccccc-hHHHHHHHHhhCCCCEEEEEecCCCCCcH-HHHHHhhhcCCeEEEeeecCc--------CCCC----
Confidence 21 1222332 234556665225789999998642 2 22 122222110 01123443321 1122
Q ss_pred CChhHHHHHHHHHHHc-CCe--EEeecCCCC
Q 020275 286 LGDGKFESFATRWRDS-GAK--LIGGCCRTT 313 (328)
Q Consensus 286 ~~~~~~~~~~~~~~~~-G~~--iiGGCCGt~ 313 (328)
-+++++.+.+++.++. |.. ++.=-||-.
T Consensus 307 e~~e~v~~ri~~a~~~v~~e~l~lsPdCGl~ 337 (375)
T 1ypx_A 307 EDEAAIKARIEEASEIVPLSQLRLSPQCGFA 337 (375)
T ss_dssp CCSHHHHHHHHHHHHHSCGGGEEEEESSCCC
T ss_pred CCHHHHHHHHHHHHHhcCccceEecCCCCcc
Confidence 2588899988888766 875 889999877
No 294
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=50.62 E-value=1.4e+02 Score=26.86 Aligned_cols=151 Identities=13% Similarity=0.090 Sum_probs=84.0
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|+|-|..+==..-. .-++.+|-.++.+.+++.+. ++-.+|+|
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~-----~~Ls~~Er~~v~~~~v~~~~-----------------grvpViaG- 99 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEG-----AYLSDPEWDEVVDFTLKTVA-----------------HRVPTIVS- 99 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTG-----GGSCHHHHHHHHHHHHHHHT-----------------TSSCBEEE-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe-
Confidence 35678888888889999966644211111 13455666677666665442 23345666
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
+|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++=
T Consensus 100 vg~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilY 156 (315)
T 3na8_A 100 VSDL------------------TTAKT----VRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI-GVPVMLY 156 (315)
T ss_dssp CCCS------------------SHHHH----HHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred cCCC------------------CHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCcEEEE
Confidence 3331 22332 4566777789999998753 246677766666665543 6999854
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC--hhhhHHHHH
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP--PQFVENLIC 253 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~--p~~~~~~l~ 253 (328)
=.. .++.-.-+.+...+.+.+.+++ +||--++ ...+..+++
T Consensus 157 n~P---~~tg~~l~~~~~~~L~a~~pnI--vgiKdssgd~~~~~~~~~ 199 (315)
T 3na8_A 157 NNP---GTSGIDMSVELILRIVREVDNV--TMVKESTGDIQRMHKLRL 199 (315)
T ss_dssp ECH---HHHSCCCCHHHHHHHHHHSTTE--EEEEECSSCHHHHHHHHH
T ss_pred eCc---chhCcCCCHHHHHHHHhcCCCE--EEEECCCCCHHHHHHHHH
Confidence 321 2222223444333432554554 5555543 444444443
No 295
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=50.36 E-value=72 Score=29.96 Aligned_cols=66 Identities=15% Similarity=0.276 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHHHH-HhcCCCeEEEe---cCCCHH-HHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVL-VESGPDLLAFE---TIPNKL-EAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l-~~~gvD~i~~E---T~~~~~-E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
.+.+.++.. ++.+ .+..||.+++- .+.+.+ =++++++++++.+.++|+++.+ .|+..++..+
T Consensus 300 a~~e~~~~a----l~~il~d~~v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl---------~G~n~~~g~~ 366 (395)
T 2fp4_B 300 VKESQVYQA----FKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRL---------EGTNVHEAQN 366 (395)
T ss_dssp CCHHHHHHH----HHHHHHCTTCCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------EETTHHHHHH
T ss_pred CCHHHHHHH----HHHHhCCCCCCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEc---------CCCCHHHHHH
Confidence 466665554 4433 46889998754 345543 4678899999865579999866 5777777877
Q ss_pred HHHh
Q 020275 228 IINK 231 (328)
Q Consensus 228 ~~~~ 231 (328)
.+.+
T Consensus 367 ~L~~ 370 (395)
T 2fp4_B 367 ILTN 370 (395)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 296
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=49.97 E-value=95 Score=29.45 Aligned_cols=83 Identities=17% Similarity=0.240 Sum_probs=47.0
Q ss_pred ccEEEEEEecCCCCCCCCCCHHH---HHHHHHhcCCceEEEECCCCh-----------hhhHHHHHHHHhh---------
Q 020275 202 IPSWICFSSVDGENAPSGESFKE---CLDIINKSGKVNAVGINCAPP-----------QFVENLICYFKEL--------- 258 (328)
Q Consensus 202 ~pv~is~~~~~~~~l~~G~~~~~---~~~~~~~~~~~~~iGvNC~~p-----------~~~~~~l~~l~~~--------- 258 (328)
.|+.+++.-. ..+. ..+++ +++.+.. .+++|-|||++| +.+..+++.+++.
T Consensus 182 ~~vgvnIg~n--k~t~--~~~~Dy~~~a~~l~~--~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~ 255 (415)
T 3i65_A 182 HIVGVSIGKN--KDTV--NIVDDLKYCINKIGR--YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNI 255 (415)
T ss_dssp CEEEEEECCC--TTCS--CHHHHHHHHHHHHGG--GCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceEEEEeccc--cCcc--ccHHHHHHHHHHHHh--hCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhccccc
Confidence 5677777311 1111 22444 4444443 378899998754 3455566665543
Q ss_pred -----------cCCe-EEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 259 -----------TKKA-IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 259 -----------~~~p-l~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
..+| +.++--. . ++.+++.+.++...+.|+.-
T Consensus 256 ~~~~~~~~~~~~~~P~V~VKi~p-------------d--~~~~~i~~iA~~a~~aGaDg 299 (415)
T 3i65_A 256 MNDEFLWFNTTKKKPLVFVKLAP-------------D--LNQEQKKEIADVLLETNIDG 299 (415)
T ss_dssp SCHHHHCCSSSSSCCEEEEEECS-------------C--CCHHHHHHHHHHHHHHTCSE
T ss_pred ccccccccccCCCCCeEEEEecC-------------C--CCHHHHHHHHHHHHHcCCcE
Confidence 2467 6665431 1 24557888888888888743
No 297
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=49.97 E-value=37 Score=30.96 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhcC--CCeEEEec-----CCCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 159 KDFHRRRLQVLVESG--PDLLAFET-----IPNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 159 ~~~h~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
.+.+..+++.|.+.| +|.|-+.+ .|+..+++.+++.+.+. ++|+||| +.+.
T Consensus 187 ~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~--G~pi~iTEldi~ 245 (331)
T 1n82_A 187 REKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASL--GVVLHITELDVS 245 (331)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTT--TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhc--CCeEEEEeceec
Confidence 455666888888888 49987753 47889999999888866 4999998 4443
No 298
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=49.88 E-value=1.6e+02 Score=27.28 Aligned_cols=95 Identities=20% Similarity=0.227 Sum_probs=56.6
Q ss_pred HHHHHhcCCCeEEEe-cCCC-------------HHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH---HH
Q 020275 166 LQVLVESGPDLLAFE-TIPN-------------KLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL---DI 228 (328)
Q Consensus 166 i~~l~~~gvD~i~~E-T~~~-------------~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~---~~ 228 (328)
++...++|+|.+-+= ..++ ++.++.+++.+++.+ ..+-+.|++.+.. -.+++.++ +.
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g--~~~~v~~~~ed~~----~~~~~~~~~~~~~ 153 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAA--PHVEVRFSAEDTF----RSEEQDLLAVYEA 153 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHC--TTSEEEEEETTTT----TSCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCEEEEEEEEeCC----CCCHHHHHHHHHH
Confidence 466667899976543 2222 344667778888775 2345556554332 33444444 43
Q ss_pred HHhcCCceEEEEC----CCChhhhHHHHHHHHhh--cCCeEEEEeC
Q 020275 229 INKSGKVNAVGIN----CAPPQFVENLICYFKEL--TKKAIVVYPN 268 (328)
Q Consensus 229 ~~~~~~~~~iGvN----C~~p~~~~~~l~~l~~~--~~~pl~~ypN 268 (328)
+.+ . +..|.+- +..|..+..+++.+++. .+.||.+...
T Consensus 154 ~~~-~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~H 197 (382)
T 2ztj_A 154 VAP-Y-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGH 197 (382)
T ss_dssp HGG-G-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEB
T ss_pred HHH-h-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 333 3 5555552 34599999999999887 5678877654
No 299
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=49.77 E-value=34 Score=30.45 Aligned_cols=58 Identities=12% Similarity=0.180 Sum_probs=32.5
Q ss_pred HhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 170 VESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 170 ~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.+.|+|+|.+-|+ ++++++.+++.++....+.|+.+|= |-+++.+.+.+. .++++||+
T Consensus 199 ~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~i~AsG----------GI~~~ni~~~~~--aGaD~i~v 256 (273)
T 2b7n_A 199 MNAGADIVMCDNL-SVLETKEIAAYRDAHYPFVLLEASG----------NISLESINAYAK--SGVDAISV 256 (273)
T ss_dssp HHHTCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEES----------SCCTTTHHHHHT--TTCSEEEC
T ss_pred HHcCCCEEEECCC-CHHHHHHHHHHhhccCCCcEEEEEC----------CCCHHHHHHHHH--cCCcEEEE
Confidence 3467888888875 4677777776665421235555442 333344444433 35666666
No 300
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=49.69 E-value=1.5e+02 Score=26.70 Aligned_cols=101 Identities=14% Similarity=0.160 Sum_probs=64.3
Q ss_pred HHHHHHHhcCCCeEEEecCC----------------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP----------------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~----------------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
+-++.|.++|++.+-+|-.. +..|...-++++++.....+++|.-..+.. + -+..++++++
T Consensus 98 ~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~--~-a~~g~~~ai~ 174 (295)
T 1s2w_A 98 RLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAF--I-AGWGLDEALK 174 (295)
T ss_dssp HHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTT--T-TTCCHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHH--h-ccccHHHHHH
Confidence 34677778999999999653 344666666666665434566666654332 1 2344777776
Q ss_pred HHHh--cCCceEEEECC-CC-hhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 228 IINK--SGKVNAVGINC-AP-PQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 228 ~~~~--~~~~~~iGvNC-~~-p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
.... ..++++|=+-| .. ++.+..+.+.+.. +.|+++-|..
T Consensus 175 Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~~P~i~~~~~ 218 (295)
T 1s2w_A 175 RAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN--QGPVVIVPTK 218 (295)
T ss_dssp HHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT--CSCEEECCST
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC--CCCEEEeCCC
Confidence 4432 25889999998 44 6677666666642 3788876653
No 301
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=49.04 E-value=56 Score=27.70 Aligned_cols=89 Identities=15% Similarity=0.120 Sum_probs=49.2
Q ss_pred HHHHHHHHhcCCCeEEEecCCC--H--HHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPN--K--LEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~--~--~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i 238 (328)
.++++.+.+.|+|++.+.+... . ..+..+++.+++...+.++++++. +++++..... .+++.|
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~-----------t~~ea~~a~~--~Gad~i 157 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIS-----------TFDEGLVAHQ--AGIDFV 157 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECS-----------SHHHHHHHHH--TTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCC-----------CHHHHHHHHH--cCCCEE
Confidence 4577788899999998865421 1 123445666665422467665432 4566655443 467888
Q ss_pred E-----ECCCC---hhhhHHHHHHHHhhcCCeEEE
Q 020275 239 G-----INCAP---PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 239 G-----vNC~~---p~~~~~~l~~l~~~~~~pl~~ 265 (328)
| +|-.. ...-...++++.+. +.|+++
T Consensus 158 ~~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvia 191 (234)
T 1yxy_A 158 GTTLSGYTPYSRQEAGPDVALIEALCKA-GIAVIA 191 (234)
T ss_dssp ECTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEEE
T ss_pred eeeccccCCCCcCCCCCCHHHHHHHHhC-CCCEEE
Confidence 3 33211 01112556666665 567554
No 302
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=48.97 E-value=1.6e+02 Score=26.93 Aligned_cols=154 Identities=10% Similarity=0.046 Sum_probs=86.1
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|++-|..+ |-+ -.. -++.+|-.++++.+++.+. ++-.+|+|
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTG-E~~-----~Ls~eEr~~vi~~~ve~~~-----------------grvpViaG 106 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGG-EFS-----QLGAEERKAIARFAIDHVD-----------------RRVPVLIG 106 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTT-TGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcccc-Chh-----hCCHHHHHHHHHHHHHHhC-----------------CCCcEEEe
Confidence 35678888888899999966543 322 111 2455666677666665432 23345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
. |.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 107 v-g~~------------------st~ea----i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~-~lPiil 162 (343)
T 2v9d_A 107 T-GGT------------------NARET----IELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV-TLPVML 162 (343)
T ss_dssp C-CSS------------------CHHHH----HHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC-SSCEEE
T ss_pred c-CCC------------------CHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEE
Confidence 3 331 22332 3466666778999987754 246677766666665543 799885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYF 255 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l 255 (328)
==. ..++.-.-+.+...+..++.+++.+|=--|.....+..+++..
T Consensus 163 Yn~---P~~tg~~l~~e~~~~La~~~pnIvgiKdssgd~~~~~~l~~~~ 208 (343)
T 2v9d_A 163 YNF---PALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTV 208 (343)
T ss_dssp EEC---HHHHSSCCCHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHH
T ss_pred EeC---chhcCcCCCHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHHhc
Confidence 321 1222122344444444424455544444444556666665544
No 303
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=48.95 E-value=1.2e+02 Score=25.63 Aligned_cols=110 Identities=13% Similarity=0.141 Sum_probs=67.4
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
.++++...+.|+|++..-- .+ ..+.++.++.+ .|+++.+ .+++++..... .+++.|++
T Consensus 78 ~d~~~~A~~aGAd~v~~p~-~d----~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~v~~-- 135 (214)
T 1wbh_A 78 PQQLAEVTEAGAQFAISPG-LT----EPLLKAATEGT--IPLIPGI-----------STVSELMLGMD--YGLKEFKF-- 135 (214)
T ss_dssp HHHHHHHHHHTCSCEEESS-CC----HHHHHHHHHSS--SCEEEEE-----------SSHHHHHHHHH--TTCCEEEE--
T ss_pred HHHHHHHHHcCCCEEEcCC-CC----HHHHHHHHHhC--CCEEEec-----------CCHHHHHHHHH--CCCCEEEE--
Confidence 3578888889999998552 22 34556666654 7888753 23677776654 47899999
Q ss_pred CCh-hh--hHHHHHHHHhhc-CCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc-CCeEEeecCCCChHH
Q 020275 243 APP-QF--VENLICYFKELT-KKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS-GAKLIGGCCRTTPST 316 (328)
Q Consensus 243 ~~p-~~--~~~~l~~l~~~~-~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~iiGGCCGt~P~h 316 (328)
.| .. -...|+.++... +.|++ |=+| +++++ +.+|++. |+..+||--=+..+.
T Consensus 136 -Fpa~~~gG~~~lk~i~~~~~~ipvv--aiGG---------------I~~~n----~~~~l~agg~~~v~gS~i~~~~~ 192 (214)
T 1wbh_A 136 -FPAEANGGVKALQAIAGPFSQVRFC--PTGG---------------ISPAN----YRDYLALKSVLCIGGSWLVPADA 192 (214)
T ss_dssp -TTTTTTTHHHHHHHHHTTCTTCEEE--EBSS---------------CCTTT----HHHHHTSTTBSCEEEGGGSCHHH
T ss_pred -ecCccccCHHHHHHHhhhCCCCeEE--EECC---------------CCHHH----HHHHHhcCCCeEEEeccccChhh
Confidence 44 22 257788887665 45653 3333 23433 3447777 777677554444443
No 304
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=48.93 E-value=1.8e+02 Score=27.53 Aligned_cols=141 Identities=14% Similarity=0.174 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEec----------CCCHHHHHHHHHHHHhc-------------------CCCcc-EEEE
Q 020275 158 LKDFHRRRLQVLVESGPDLLAFET----------IPNKLEAQALVELLEEE-------------------NIQIP-SWIC 207 (328)
Q Consensus 158 ~~~~h~~qi~~l~~~gvD~i~~ET----------~~~~~E~~a~~~~~~~~-------------------~~~~p-v~is 207 (328)
..+.|..-++.|.+. +|+|-+.- +.+.+.+..+++++++. ..++| +++-
T Consensus 197 ~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VK 275 (415)
T 3i65_A 197 IVDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVK 275 (415)
T ss_dssp HHHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEE
T ss_pred cHHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEE
Confidence 345566677777654 89987662 23344555666666543 12589 8988
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE-CCCC-----------------h---hhhHHHHHHHHhhc--CCeEE
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGI-NCAP-----------------P---QFVENLICYFKELT--KKAIV 264 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv-NC~~-----------------p---~~~~~~l~~l~~~~--~~pl~ 264 (328)
++.+- +-+.+.+.++.+.+ .++++|-+ |-+. + .....+++++++.. +.|++
T Consensus 276 i~pd~-----~~~~i~~iA~~a~~-aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPII 349 (415)
T 3i65_A 276 LAPDL-----NQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPII 349 (415)
T ss_dssp ECSCC-----CHHHHHHHHHHHHH-HTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEE
T ss_pred ecCCC-----CHHHHHHHHHHHHH-cCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEE
Confidence 86421 11235566666654 36676543 4321 1 12335677777776 45765
Q ss_pred EEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEeecCCC---ChHHHHHHHHHHh
Q 020275 265 VYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCRT---TPSTIQAVSKVLK 325 (328)
Q Consensus 265 ~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCGt---~P~hI~al~~~l~ 325 (328)
. ++|. .++++..+ .+..||..|.-+-+. +|.-++.|.+.+.
T Consensus 350 g--~GGI--------------~s~eDa~e----~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~ 393 (415)
T 3i65_A 350 A--SGGI--------------FSGLDALE----KIEAGASVCQLYSCLVFNGMKSAVQIKRELN 393 (415)
T ss_dssp E--CSSC--------------CSHHHHHH----HHHHTEEEEEESHHHHHHGGGHHHHHHHHHH
T ss_pred E--ECCC--------------CCHHHHHH----HHHcCCCEEEEcHHHHhcCHHHHHHHHHHHH
Confidence 4 4442 12333333 445688777655443 4777777776654
No 305
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=48.82 E-value=92 Score=26.98 Aligned_cols=148 Identities=12% Similarity=0.123 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhc
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKS 232 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 232 (328)
.+.+++.+...+.++.|.+.|+|+|++=..+.. ..+++.+++.- +.|++ .+ .+.++..+...
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~---~~~~~~lr~~~-~iPvi-gi-------------~e~~~~~A~~~ 103 (254)
T 1b73_A 42 RSKDTIIRYSLECAGFLKDKGVDIIVVACNTAS---AYALERLKKEI-NVPVF-GV-------------IEPGVKEALKK 103 (254)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---TTSHHHHHHHS-SSCEE-ES-------------HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhC-CCCEE-ee-------------eHHHHHHHHHc
Confidence 378899999999999999999999986643221 11345556543 68977 21 23344433221
Q ss_pred CCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC-eEEeecCC
Q 020275 233 GKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA-KLIGGCCR 311 (328)
Q Consensus 233 ~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~iiGGCCG 311 (328)
..-.-|||=.+.........+.+-...+..+...|..+....-... +... ....+.+.++++++.+. + .||=||-+
T Consensus 104 ~~~~rigVlaT~~T~~~~~y~~~l~~~g~~v~~~~~~~~v~~ie~g-~~~~-~~~~~~l~~~~~~l~~~-~d~IILGCT~ 180 (254)
T 1b73_A 104 SRNKKIGVIGTPATVKSGAYQRKLEEGGADVFAKACPLFAPLAEEG-LLEG-EITRKVVEHYLKEFKGK-IDTLILGCTH 180 (254)
T ss_dssp CSSCEEEEEECHHHHHHCHHHHHHHTTSCEEEEEECCCCTTTSCGG-GGSG-GGHHHHHHHHSTTTTTT-CSEEEECCCC
T ss_pred cCCCEEEEEEChHHhhhHHHHHHHHcCCCEEEecCCHHHHHHHHCC-CCCC-HHHHHHHHHHHHHHHhc-CCEEEECccC
Confidence 2223577766643322223332222233444445554322111111 1110 00123455555555443 4 44555766
Q ss_pred CChHHHHHHHH
Q 020275 312 TTPSTIQAVSK 322 (328)
Q Consensus 312 t~P~hI~al~~ 322 (328)
-.. -.+.+.+
T Consensus 181 ~p~-l~~~i~~ 190 (254)
T 1b73_A 181 YPL-LKKEIKK 190 (254)
T ss_dssp TTC-CHHHHHH
T ss_pred hHH-HHHHHHH
Confidence 544 3444443
No 306
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=48.48 E-value=47 Score=32.60 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhcC-CCeEEEec--------CCCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 159 KDFHRRRLQVLVESG-PDLLAFET--------IPNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 159 ~~~h~~qi~~l~~~g-vD~i~~ET--------~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
.+.+.+.++.|.+.| +|.|-+.. ++++.+++.+++.+... ++|++|| +.+.
T Consensus 393 ~~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~~~~~~~~~~~~l~~~a~~--Gl~i~iTElDi~ 453 (540)
T 2w5f_A 393 RDCIASICANLYNKGLLDGVGMQSHINADMNGFSGIQNYKAALQKYINI--GCDVQITELDIS 453 (540)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCEEESCSSSTTCHHHHHHHHHHHHTT--TSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCcccEEEEeeEecCCCCCCCCHHHHHHHHHHHHhc--CCcEEEEeeeec
Confidence 344556778887777 58774332 46888999999888766 4999998 5554
No 307
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=48.31 E-value=50 Score=30.03 Aligned_cols=97 Identities=15% Similarity=0.184 Sum_probs=55.3
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCC---C---CCCCCCHHHHHHHHH---hcCCc
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGE---N---APSGESFKECLDIIN---KSGKV 235 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~---~---l~~G~~~~~~~~~~~---~~~~~ 235 (328)
.++.+.+.|+|++-+=...-..-++++++++++.+ ..|-++.+++.... . +.+ .++.+.+..+. ...++
T Consensus 95 av~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~-~~~~llaVtvLTS~s~~~l~~l~~-~~~~e~V~~lA~~a~~~G~ 172 (303)
T 3ru6_A 95 ACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFS-KRPLVLAVSALTSFDEENFFSIYR-QKIEEAVINFSKISYENGL 172 (303)
T ss_dssp HHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSS-SCCEEEEECSCTTCCHHHHHHHHS-SCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcC-CCceEEEEEEecCCCHHHHHHHHc-CCHHHHHHHHHHHHHHcCC
Confidence 34567788999999888777777888888887664 35667666543221 0 112 34444443221 12343
Q ss_pred eEEEECCCChhhhHHHHHHHHhhc-CCeEEEEeCCC
Q 020275 236 NAVGINCAPPQFVENLICYFKELT-KKAIVVYPNSG 270 (328)
Q Consensus 236 ~~iGvNC~~p~~~~~~l~~l~~~~-~~pl~~ypN~g 270 (328)
.|+=|+ |..+ +.++... +.++.+-|--+
T Consensus 173 --dGvV~s-~~E~----~~IR~~~~~~fl~VTPGIr 201 (303)
T 3ru6_A 173 --DGMVCS-VFES----KKIKEHTSSNFLTLTPGIR 201 (303)
T ss_dssp --SEEECC-TTTH----HHHHHHSCTTSEEEECCCC
T ss_pred --CEEEEC-HHHH----HHHHHhCCCccEEECCCcC
Confidence 467775 3332 3444433 34566667544
No 308
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=48.30 E-value=81 Score=27.72 Aligned_cols=64 Identities=17% Similarity=0.232 Sum_probs=46.4
Q ss_pred HHHHHHhcCCCeEEEe-cCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcC-CceEEEECC
Q 020275 165 RLQVLVESGPDLLAFE-TIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSG-KVNAVGINC 242 (328)
Q Consensus 165 qi~~l~~~gvD~i~~E-T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~-~~~~iGvNC 242 (328)
|+......|+|.+++- ++-+..+++..++.+++.+ +-+++-+. +.+++-+.+. . ++..||+|=
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG--l~~lvEv~-----------~~eE~~~A~~--l~g~~iIGinn 179 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEELG--MDSLVEVH-----------SREDLEKVFS--VIRPKIIGINT 179 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT--CEEEEEEC-----------SHHHHHHHHT--TCCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC--CeEEEEeC-----------CHHHHHHHHh--cCCCCEEEEeC
Confidence 5666778999998766 5556688999999998775 77776663 3456555543 4 688999997
Q ss_pred C
Q 020275 243 A 243 (328)
Q Consensus 243 ~ 243 (328)
.
T Consensus 180 r 180 (251)
T 1i4n_A 180 R 180 (251)
T ss_dssp B
T ss_pred c
Confidence 4
No 309
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=48.29 E-value=1.9e+02 Score=27.59 Aligned_cols=62 Identities=11% Similarity=0.161 Sum_probs=34.9
Q ss_pred HHHHHhcCCCeEEEec---------------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHH
Q 020275 166 LQVLVESGPDLLAFET---------------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIIN 230 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET---------------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 230 (328)
++.+.+.|+|+|.+-. .|...-+..+.+++++. ++|++.+= .+. +..+++..+.
T Consensus 292 a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~--~ipvia~G------GI~---~~~di~kala 360 (494)
T 1vrd_A 292 TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKY--DVPIIADG------GIR---YSGDIVKALA 360 (494)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTT--TCCEEEES------CCC---SHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhc--CCCEEEEC------CcC---CHHHHHHHHH
Confidence 3567789999998711 34443334444444433 58988542 222 3456666664
Q ss_pred hcCCceEEEE
Q 020275 231 KSGKVNAVGI 240 (328)
Q Consensus 231 ~~~~~~~iGv 240 (328)
. +++++++
T Consensus 361 ~--GAd~V~i 368 (494)
T 1vrd_A 361 A--GAESVMV 368 (494)
T ss_dssp T--TCSEEEE
T ss_pred c--CCCEEEE
Confidence 3 5666664
No 310
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=48.21 E-value=43 Score=29.81 Aligned_cols=62 Identities=11% Similarity=0.065 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
.++++.+.+.|+|.+.. ++ ++.. .+++.+++...+.++++.+ .+++++..... .+++.|+++
T Consensus 90 ~~~~~~~~~aGad~v~~-~~~~~~~---~~~~~~~~~~~~i~l~~~v-----------~~~~~~~~a~~--~Gad~I~v~ 152 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDE-SEVLTPA---DEEHHIDKWKFKVPFVCGA-----------RNLGEALRRIA--EGAAMIRTK 152 (297)
T ss_dssp HHHHHHHHHTTCSEEEE-ETTSCCS---CSSCCCCGGGCSSCEEEEE-----------SSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEee-eCCCChH---HHHHHHHHhCCCceEEeec-----------CCHHHHHHHHH--cCCCEEEEc
Confidence 45677788899999932 22 1211 1222233222245655433 24566665443 467888887
No 311
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=48.17 E-value=1.4e+02 Score=26.13 Aligned_cols=145 Identities=12% Similarity=0.101 Sum_probs=75.9
Q ss_pred CCHHHHHHHHHHHHHHHHh-cCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHh
Q 020275 153 VDLEKLKDFHRRRLQVLVE-SGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINK 231 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~-~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 231 (328)
-+.+++.++-.+.++.|.+ .|+|+|++=..+.. ..+++.+++.- +.||+ .+ ++.++..+..
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas---~~~l~~lr~~~-~iPVi-gi-------------iepa~~~A~~ 106 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT---AIALDDIQRSV-GIPVV-GV-------------IQPGARAAIK 106 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH---HHHHHHHHHHC-SSCEE-ES-------------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh---HHHHHHHHHHC-CCCEE-cc-------------cHHHHHHHHH
Confidence 3789999999999999999 99999987432211 12466677653 68977 21 2334433222
Q ss_pred cCCceEEEECCCCh----hhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCC----hhHHHHHHHHHHHcCC
Q 020275 232 SGKVNAVGINCAPP----QFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLG----DGKFESFATRWRDSGA 303 (328)
Q Consensus 232 ~~~~~~iGvNC~~p----~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~G~ 303 (328)
...-.-|||=.+.. ......++... .+..+...|..+.. + .+.....+ ...+.+++..+.+.|+
T Consensus 107 ~~~~~rIgVlaT~~T~~s~~y~~~i~~~~--~~~~v~~~~~~~~v-~-----~ve~g~~~~~~~~~~l~~~l~~l~~~~~ 178 (272)
T 1zuw_A 107 VTDNQHIGVIGTENTIKSNAYEEALLALN--PDLKVENLACPLLV-P-----FVESGKFLDQTADEIVKTSLYPLKDTSI 178 (272)
T ss_dssp HCSSSEEEEEECHHHHHTTHHHHHHHHHC--TTCEEEEEECTTHH-H-----HHTSCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred hcCCCEEEEEEChhhhhhhHHHHHHHHhC--CCCEEEeccCHHHH-H-----HHHCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 12223566655532 22344444431 12334334543311 1 01111122 2346667777877787
Q ss_pred -eEEeecCCCChHHHHHHHHHH
Q 020275 304 -KLIGGCCRTTPSTIQAVSKVL 324 (328)
Q Consensus 304 -~iiGGCCGt~P~hI~al~~~l 324 (328)
.||=||-.-.. -...|.+.+
T Consensus 179 D~iVLGCTh~pl-l~~~i~~~~ 199 (272)
T 1zuw_A 179 DSLILGCTHYPI-LKEAIQRYM 199 (272)
T ss_dssp SEEEEESTTGGG-GHHHHHHHH
T ss_pred CEEEECccCHHH-HHHHHHHHc
Confidence 45666765543 334444433
No 312
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=48.06 E-value=96 Score=24.16 Aligned_cols=19 Identities=5% Similarity=0.190 Sum_probs=10.1
Q ss_pred HHhcCCCeEEEecCCCHHH
Q 020275 169 LVESGPDLLAFETIPNKLE 187 (328)
Q Consensus 169 l~~~gvD~i~~ET~~~~~E 187 (328)
|...|.+++.+......+|
T Consensus 27 l~~~G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 27 FTNAGFNVVNIGVLSPQEL 45 (137)
T ss_dssp HHHTTCEEEEEEEEECHHH
T ss_pred HHHCCCEEEECCCCCCHHH
Confidence 3445666665555544444
No 313
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=48.00 E-value=35 Score=31.52 Aligned_cols=50 Identities=14% Similarity=0.156 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhcC--CCeEEEec-----CCCHHHHHHHHHHHH--hcCCCccEEEE-EEec
Q 020275 160 DFHRRRLQVLVESG--PDLLAFET-----IPNKLEAQALVELLE--EENIQIPSWIC-FSSV 211 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~~~~--~~~~~~pv~is-~~~~ 211 (328)
+.+..+++.|.+.| +|.|-+.. .|++.+++.+++.+. .. ++|++|| +.+.
T Consensus 192 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~~--Gl~i~ITElDv~ 251 (348)
T 1w32_A 192 TALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSP--TLKIKITELDVR 251 (348)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTCS--SCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhcccC--CCeEEEEeCccc
Confidence 44667888888888 59986643 478899999998888 55 5999999 4443
No 314
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=47.97 E-value=1.8e+02 Score=29.00 Aligned_cols=113 Identities=12% Similarity=0.098 Sum_probs=66.8
Q ss_pred CCCCHHHHH---HHHHHHHHHHHhcCCCeEEEe---c-------------------CCCHH-H---HHHHHHHHHh-cCC
Q 020275 151 PGVDLEKLK---DFHRRRLQVLVESGPDLLAFE---T-------------------IPNKL-E---AQALVELLEE-ENI 200 (328)
Q Consensus 151 ~~~~~~e~~---~~h~~qi~~l~~~gvD~i~~E---T-------------------~~~~~-E---~~a~~~~~~~-~~~ 200 (328)
+.++.+|+. +.|.+-++...++|.|.|=+= - =.|++ . +..+++++++ .+.
T Consensus 144 ~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~ 223 (690)
T 3k30_A 144 RAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAG 223 (690)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 346666554 556666666778999988541 0 12222 2 2344555554 354
Q ss_pred CccEEEEEEecCCCCCCCCCCHHHHHHHHHhc-CCceEEEECCCC------------hhhhHHHHHHHHhhcCCeEEE
Q 020275 201 QIPSWICFSSVDGENAPSGESFKECLDIINKS-GKVNAVGINCAP------------PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 201 ~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~-~~~~~iGvNC~~------------p~~~~~~l~~l~~~~~~pl~~ 265 (328)
+.|+.+-++..+.. ..|.+.++++..+... .+++++.+...+ +.....+++.+++..+.|+++
T Consensus 224 ~~~v~~r~s~~~~~--~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~ 299 (690)
T 3k30_A 224 RAAVACRITVEEEI--DGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVG 299 (690)
T ss_dssp SSEEEEEEECCCCS--TTSCCHHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEE
T ss_pred CceEEEEECccccC--CCCCCHHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEE
Confidence 67899888875433 5677777766544321 246777777632 112346677777777888765
No 315
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=47.72 E-value=1.6e+02 Score=26.46 Aligned_cols=84 Identities=12% Similarity=0.052 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
.++++.+.+.|+|++.+-- .+. ...++.+++. +.|++.++ .+.+++..... .++++|.+..
T Consensus 86 ~~~~~~~~~~g~d~V~~~~-g~p---~~~~~~l~~~--gi~vi~~v-----------~t~~~a~~~~~--~GaD~i~v~g 146 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAG-NDP---GEHIAEFRRH--GVKVIHKC-----------TAVRHALKAER--LGVDAVSIDG 146 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEE-SCC---HHHHHHHHHT--TCEEEEEE-----------SSHHHHHHHHH--TTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC-CCc---HHHHHHHHHc--CCCEEeeC-----------CCHHHHHHHHH--cCCCEEEEEC
Confidence 5678888889999987652 222 2345666665 48888654 24555655443 3677777732
Q ss_pred ---C-C--h--hhhHHHHHHHHhhcCCeEEE
Q 020275 243 ---A-P--P--QFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 243 ---~-~--p--~~~~~~l~~l~~~~~~pl~~ 265 (328)
. + . .....+++++.+..+.|+++
T Consensus 147 ~~~GG~~G~~~~~~~~~l~~v~~~~~iPvia 177 (328)
T 2gjl_A 147 FECAGHPGEDDIPGLVLLPAAANRLRVPIIA 177 (328)
T ss_dssp TTCSBCCCSSCCCHHHHHHHHHTTCCSCEEE
T ss_pred CCCCcCCCCccccHHHHHHHHHHhcCCCEEE
Confidence 1 1 1 12346777777766778755
No 316
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=47.61 E-value=42 Score=30.36 Aligned_cols=63 Identities=11% Similarity=0.175 Sum_probs=36.5
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
++...+.|+|+|.+.|+ ++++++.+++.++....+.|+.+|= |-+++.+.+.+ + .+++.||+-
T Consensus 210 ~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~I~ASG----------GIt~~ni~~~~-~-aGaD~i~vG 272 (299)
T 2jbm_A 210 AVQAAEAGADLVLLDNF-KPEELHPTATVLKAQFPSVAVEASG----------GITLDNLPQFC-G-PHIDVISMG 272 (299)
T ss_dssp HHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEES----------SCCTTTHHHHC-C-TTCCEEECT
T ss_pred HHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeeEEEEC----------CCCHHHHHHHH-H-CCCCEEEEC
Confidence 33334578888888885 4777777777666422245655443 33333444433 2 467777763
No 317
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=47.61 E-value=1.6e+02 Score=26.49 Aligned_cols=150 Identities=13% Similarity=0.099 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 53 PHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
.+.+++.-+.++++|+|-|..+ |-+ -.. -++.+|-.++.+.+++.+ ++-.+|+|.
T Consensus 28 ~~~l~~lv~~li~~Gv~Gl~v~GtTG-E~~-----~Lt~~Er~~v~~~~v~~~------------------grvpViaGv 83 (313)
T 3dz1_A 28 DVSIDRLTDFYAEVGCEGVTVLGILG-EAP-----KLDAAEAEAVATRFIKRA------------------KSMQVIVGV 83 (313)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESTGGG-TGG-----GSCHHHHHHHHHHHHHHC------------------TTSEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEeCccCc-Chh-----hCCHHHHHHHHHHHHHHc------------------CCCcEEEec
Confidence 5678888888889999966544 222 111 245566666666555433 123456663
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec---CCCHHHHHHHHHHHHhcCCC--ccEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET---IPNKLEAQALVELLEEENIQ--IPSWI 206 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET---~~~~~E~~a~~~~~~~~~~~--~pv~i 206 (328)
|.. +..+. .++++...+.|+|.+++=+ .++.+++..-.+.+.+.. + +|+++
T Consensus 84 -g~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~-~~~lPiil 139 (313)
T 3dz1_A 84 -SAP------------------GFAAM----RRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAI-GDDVPWVL 139 (313)
T ss_dssp -CCS------------------SHHHH----HHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHH-CTTSCEEE
T ss_pred -CCC------------------CHHHH----HHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhC-CCCCcEEE
Confidence 331 22332 3455666678999998742 346666666666555442 4 99885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC--CC-ChhhhHHHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN--CA-PPQFVENLICYF 255 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN--C~-~p~~~~~~l~~l 255 (328)
==. . +++.-.-+.+...+..++.++ .+||- |+ ....+..+++..
T Consensus 140 Yn~-P--~~tg~~l~~~~~~~La~~~pn--IvgiKd~~~~~~~~~~~~~~~~ 186 (313)
T 3dz1_A 140 QDY-P--LTLSVVMTPKVIRQIVMDSAS--CVMLKHEDWPGLEKITTLRGFQ 186 (313)
T ss_dssp EEC-H--HHHCCCCCHHHHHHHHHHCSS--EEEEEECCSSCHHHHHHHHHHH
T ss_pred EeC-c--cccCcCCCHHHHHHHHHhCCC--EEEEEcCCCCCHHHHHHHHHhc
Confidence 321 1 222222344433343333445 45665 33 345555555544
No 318
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=47.44 E-value=1.6e+02 Score=26.47 Aligned_cols=98 Identities=9% Similarity=0.032 Sum_probs=59.6
Q ss_pred HHHHHHHhcCCCeEEEecCC--------------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP--------------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
+-++.|.++|++.+-+|-.. +..|...-++++++.....+++|.-..+... ...++++++..
T Consensus 98 ~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~----~~gl~~ai~ra 173 (295)
T 1xg4_A 98 RTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALA----VEGLDAAIERA 173 (295)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHH----HHCHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhh----hcCHHHHHHHH
Confidence 45666778999999999643 4456655566666654356777666543211 12356666543
Q ss_pred Hh--cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 230 NK--SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 230 ~~--~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
.. ..++++|=+-|.. ++.+..+.+. .+.|+++-+..
T Consensus 174 ~ay~eAGAd~i~~e~~~~~~~~~~i~~~----~~iP~~~N~~~ 212 (295)
T 1xg4_A 174 QAYVEAGAEMLFPEAITELAMYRQFADA----VQVPILANITE 212 (295)
T ss_dssp HHHHHTTCSEEEETTCCSHHHHHHHHHH----HCSCBEEECCS
T ss_pred HHHHHcCCCEEEEeCCCCHHHHHHHHHH----cCCCEEEEecc
Confidence 22 2588999999974 4455544444 45788765543
No 319
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=47.39 E-value=1.6e+02 Score=26.52 Aligned_cols=98 Identities=8% Similarity=0.020 Sum_probs=63.4
Q ss_pred HHHHHHHhcCCCeEEEecCC--------------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP--------------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
+-++.|.++|++.+-+|-.. +..|...=++++++.-.+.+++|---.+... ...++++++..
T Consensus 102 ~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~----~~gldeai~Ra 177 (298)
T 3eoo_A 102 RTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAA----AEGIDAAIERA 177 (298)
T ss_dssp HHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHH----HHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhh----hcCHHHHHHHH
Confidence 34677888999999999643 5566666666666543346777776653321 23467777655
Q ss_pred Hh--cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 230 NK--SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 230 ~~--~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
.. ..++++|=+-|.. ++.+..+.+.+ +.|+.+-+-.
T Consensus 178 ~ay~~AGAD~if~~~~~~~ee~~~~~~~~----~~Pl~~n~~~ 216 (298)
T 3eoo_A 178 IAYVEAGADMIFPEAMKTLDDYRRFKEAV----KVPILANLTE 216 (298)
T ss_dssp HHHHHTTCSEEEECCCCSHHHHHHHHHHH----CSCBEEECCT
T ss_pred HhhHhcCCCEEEeCCCCCHHHHHHHHHHc----CCCeEEEecc
Confidence 32 2578999999974 66666665554 5788765543
No 320
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=47.24 E-value=1.7e+02 Score=26.75 Aligned_cols=140 Identities=16% Similarity=0.166 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEecCCCH-----------HHHHHHHHHHHh----cCCCccEEEEEEecCCCCCCC
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLLAFETIPNK-----------LEAQALVELLEE----ENIQIPSWICFSSVDGENAPS 218 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~-----------~E~~a~~~~~~~----~~~~~pv~is~~~~~~~~l~~ 218 (328)
+.++++...++.++.+.+.||- .+|.+.++ ..++++++++++ .+....+++++. .
T Consensus 75 ~~e~~~~~~~~~l~~~~~dgV~--y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~----R---- 144 (343)
T 3rys_A 75 TEQDFTDMTRAYLERAAAGGVR--HAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFL----R---- 144 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEE--EEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEE----T----
T ss_pred CHHHHHHHHHHHHHHHHHCCCE--EEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeC----C----
Confidence 6788999899999999988874 45655543 235556666654 333345555553 1
Q ss_pred CCCHHHHHHHH---Hh-cCCceEEEECCC----ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhH
Q 020275 219 GESFKECLDII---NK-SGKVNAVGINCA----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGK 290 (328)
Q Consensus 219 G~~~~~~~~~~---~~-~~~~~~iGvNC~----~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~ 290 (328)
..+.+++.+.+ .+ ...+.+|++-|. +|+....+++..++. +.++-+. +|+. .+++
T Consensus 145 ~~~~~~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~-gl~~~~H--agE~-------------~~~~- 207 (343)
T 3rys_A 145 DMSEDSALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEA-GLRRIAH--AGEE-------------GPAS- 207 (343)
T ss_dssp TSCHHHHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHHHHHHHT-TCEEEEE--ESSS-------------SCHH-
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHHHHHHHC-CCeEEEe--eCCC-------------CCHH-
Confidence 11233333322 21 246788888874 357777777766543 4554443 3431 0232
Q ss_pred HHHHHHHHHH-cCCeEEeecCCCC--hHHHHHHHHH
Q 020275 291 FESFATRWRD-SGAKLIGGCCRTT--PSTIQAVSKV 323 (328)
Q Consensus 291 ~~~~~~~~~~-~G~~iiGGCCGt~--P~hI~al~~~ 323 (328)
.+.+.++ .|+.-||=|+... |+.|+.|++.
T Consensus 208 ---~i~~al~~lg~~rIgHgv~l~~d~~l~~~l~~~ 240 (343)
T 3rys_A 208 ---YITEALDVLHVERIDHGIRCMEDTDVVQRLVAE 240 (343)
T ss_dssp ---HHHHHHHTSCCSEEEECGGGGGCHHHHHHHHHH
T ss_pred ---HHHHHHhcCCcceeeeeeeecCChHHHHHHHhc
Confidence 3344454 7887788777765 7788888764
No 321
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=47.04 E-value=1.6e+02 Score=26.39 Aligned_cols=91 Identities=10% Similarity=0.040 Sum_probs=52.9
Q ss_pred HHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 165 RLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
+++.+.+ .+|++-+-. +.+.. .++.+... ++||.++-- .-.+=..+..+++.+....+...+.+-|
T Consensus 101 ~~~~l~~-~vd~~kIgA~~~~n~~----Ll~~~a~~--~kPV~lk~G-----~~~t~~ei~~Av~~i~~~Gn~~i~L~~r 168 (292)
T 1o60_A 101 QCQPVAD-VVDIIQLPAFLARQTD----LVEAMAKT--GAVINVKKP-----QFLSPSQMGNIVEKIEECGNDKIILCDR 168 (292)
T ss_dssp GHHHHHT-TCSEEEECGGGTTCHH----HHHHHHHT--TCEEEEECC-----TTSCGGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHHHHh-cCCEEEECcccccCHH----HHHHHHcC--CCcEEEeCC-----CCCCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 5666666 799998765 33333 44444444 599997742 1011124556777776545567888888
Q ss_pred CC--hh----hhHHHHHHHHhhc-CCeEEEEe
Q 020275 243 AP--PQ----FVENLICYFKELT-KKAIVVYP 267 (328)
Q Consensus 243 ~~--p~----~~~~~l~~l~~~~-~~pl~~yp 267 (328)
.. +. .=...+..+++.. ..|+++=|
T Consensus 169 g~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~ 200 (292)
T 1o60_A 169 GTNFGYDNLIVDMLGFSVMKKASKGSPVIFDV 200 (292)
T ss_dssp CEECSTTCEECCTTHHHHHHHHTTSCCEEEEH
T ss_pred CCCCCCCccccCHHHHHHHHhhCCCCCEEEEC
Confidence 63 22 1224455677766 67877733
No 322
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=46.99 E-value=1.8e+02 Score=26.95 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHH
Q 020275 53 PHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLA 104 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA 104 (328)
.+.+++.-+.++++|++-|..+ |-+ -.. -++.+|-.++.+.+++.+
T Consensus 79 ~~al~~lv~~li~~Gv~Gl~v~GTTG-E~~-----~Ls~eEr~~vi~~~ve~~ 125 (360)
T 4dpp_A 79 LEAYDDLVNIQIQNGAEGVIVGGTTG-EGQ-----LMSWDEHIMLIGHTVNCF 125 (360)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccccc-Chh-----hCCHHHHHHHHHHHHHHh
Confidence 4678888888889999965543 222 111 245566666666665543
No 323
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=46.61 E-value=44 Score=28.82 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=27.0
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcC
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEEN 199 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~ 199 (328)
.++.+.+.|+|++-+=......-++++++.+++.+
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g 117 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGADSVRACLNVAEEMG 117 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcC
Confidence 45566778999998876666666888889888765
No 324
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=46.37 E-value=49 Score=28.89 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=44.6
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHH---HHHHHhcCCceEEEECCC
Q 020275 174 PDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKEC---LDIINKSGKVNAVGINCA 243 (328)
Q Consensus 174 vD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~---~~~~~~~~~~~~iGvNC~ 243 (328)
+|+ +.|+.++..++.+-+.+++.+..++|+|.+..-.+ ..+.|-+.+++ +..+.+.+++...|+-|.
T Consensus 98 ~~~--i~sVds~~~a~~l~~~a~~~~~~~~V~lqVntG~e-~~R~G~~~ee~~~l~~~i~~~~~l~l~Glmt~ 167 (245)
T 3sy1_A 98 FDW--CITIDRLRIATRLNDQRPAELPPLNVLIQINISDE-NSKSGIQLAELDELAAAVAELPRLRLRGLSAI 167 (245)
T ss_dssp CSE--EEEECCHHHHHHHHHHSCTTSCCEEEEEEBCCSCT-TCCSSBCGGGHHHHHHHHTTCTTEEEEEEECC
T ss_pred CCE--EEecCCHHHHHHHHHHHHHcCCCceEEEEEECCCC-cCCcCCCHHHHHHHHHHHHcCCCCeEEEEEEe
Confidence 565 47899999999888877766656778877764211 33467555544 444555567778899775
No 325
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=46.22 E-value=1.2e+02 Score=26.13 Aligned_cols=105 Identities=11% Similarity=0.092 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecCC--------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 156 EKLKDFHRRRLQVLVESGPDLLAFETIP--------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 156 ~e~~~~h~~qi~~l~~~gvD~i~~ET~~--------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
+.+.+..++..+...+.||. |.+|+.+ +..++..+++.+ + +..+-+.+. -..-...|.++.+.++
T Consensus 128 ~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v---~-~~~vg~~~D--~~h~~~~g~d~~~~l~ 200 (294)
T 3vni_A 128 ERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVDFVKQV---D-HNNVKVMLD--TFHMNIEEDSIGGAIR 200 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH---C-CTTEEEEEE--HHHHHHHCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHHHHHHc---C-CCCEEEEEE--hhhhHHcCCCHHHHHH
Confidence 33444444445555567886 6679874 456665555544 3 122333333 2222335678888887
Q ss_pred HHHhcCCceEEEECCC---Ch----hhhHHHHHHHHhh-cCCeEEEEeCC
Q 020275 228 IINKSGKVNAVGINCA---PP----QFVENLICYFKEL-TKKAIVVYPNS 269 (328)
Q Consensus 228 ~~~~~~~~~~iGvNC~---~p----~~~~~~l~~l~~~-~~~pl~~ypN~ 269 (328)
.+.. .+..|=++=. .| -.+..+++.+++. .+.++++-+..
T Consensus 201 ~~~~--~i~~vHl~D~~r~~pG~G~id~~~~~~~L~~~gy~g~~~lE~~~ 248 (294)
T 3vni_A 201 TAGS--YLGHLHTGECNRKVPGRGRIPWVEIGEALADIGYNGSVVMEPFV 248 (294)
T ss_dssp HHGG--GEEEEEECCTTSCCTTSSSCCHHHHHHHHHHTTCCSCEEECCCC
T ss_pred Hhhh--hEeEEEeCCCCCCCCCCCCcCHHHHHHHHHHhCCCCcEEEEecc
Confidence 6632 2333333321 12 1356677777654 34578776554
No 326
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=46.04 E-value=95 Score=28.34 Aligned_cols=95 Identities=11% Similarity=0.078 Sum_probs=58.4
Q ss_pred HHHHHHhcCCCeEEEecCCC---------------HHHHHHHHHHHHhcCCCccEEEEEEecC---CCCCCCCCCHH---
Q 020275 165 RLQVLVESGPDLLAFETIPN---------------KLEAQALVELLEEENIQIPSWICFSSVD---GENAPSGESFK--- 223 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~---------------~~E~~a~~~~~~~~~~~~pv~is~~~~~---~~~l~~G~~~~--- 223 (328)
-++...++|+|.|-+-.-.| ++.++.+++.+++.+ +.+.+++ .+ .++ .+++
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G--~~v~~~~--~~~~~~~~----~~~~~~~ 172 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSG--LKINVYL--EDWSNGFR----NSPDYVK 172 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTT--CEEEEEE--ETHHHHHH----HCHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEEE--EECCCCCc----CCHHHHH
Confidence 35666778999986543222 246667778788775 5555444 33 221 2333
Q ss_pred HHHHHHHhcCCceEEEECC----CChhhhHHHHHHHHhhc-CCeEEEEeC
Q 020275 224 ECLDIINKSGKVNAVGINC----APPQFVENLICYFKELT-KKAIVVYPN 268 (328)
Q Consensus 224 ~~~~~~~~~~~~~~iGvNC----~~p~~~~~~l~~l~~~~-~~pl~~ypN 268 (328)
+.++.+.+ .+++.|.+-= ..|..+..+++.+++.. +.||.+...
T Consensus 173 ~~~~~~~~-~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~H 221 (337)
T 3ble_A 173 SLVEHLSK-EHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGH 221 (337)
T ss_dssp HHHHHHHT-SCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECB
T ss_pred HHHHHHHH-cCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 34444443 4677666633 35999999999998877 568877653
No 327
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=46.04 E-value=3e+02 Score=29.62 Aligned_cols=86 Identities=13% Similarity=0.093 Sum_probs=52.0
Q ss_pred CceEEEE--CCCChhhhHHHHHHHHhhcCCeEEEEeCC-CCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEEeec-
Q 020275 234 KVNAVGI--NCAPPQFVENLICYFKELTKKAIVVYPNS-GEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGC- 309 (328)
Q Consensus 234 ~~~~iGv--NC~~p~~~~~~l~~l~~~~~~pl~~ypN~-g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGC- 309 (328)
+++.+.| .+...+.+...++.+++.. ..+..+-.. +.+.|+.. ...+++.+.+.+++..+.|+.+|.=|
T Consensus 658 g~d~irif~sl~~~~~~~~~i~~~~~~g-~~v~~~i~~~~~~~d~~r------~~~~~~~~~~~~~~~~~~Ga~~i~l~D 730 (1165)
T 2qf7_A 658 GIDLFRVFDCLNWVENMRVSMDAIAEEN-KLCEAAICYTGDILNSAR------PKYDLKYYTNLAVELEKAGAHIIAVKD 730 (1165)
T ss_dssp TCCEEEEECTTCCGGGGHHHHHHHHHTT-CEEEEEEECCSCTTCTTS------GGGCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CcCEEEEEeeHHHHHHHHHHHHHHHhcc-ceEEEEEEEeccccCCCC------CCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4454444 3334677888888877653 333222111 11112111 01367889999999999999887654
Q ss_pred --CCCChHHHHHHHHHHhc
Q 020275 310 --CRTTPSTIQAVSKVLKE 326 (328)
Q Consensus 310 --CGt~P~hI~al~~~l~~ 326 (328)
-..+|..+..|-+.++.
T Consensus 731 T~G~~~P~~~~~lv~~l~~ 749 (1165)
T 2qf7_A 731 MAGLLKPAAAKVLFKALRE 749 (1165)
T ss_dssp TTCCCCHHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHH
Confidence 24589999888777753
No 328
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=45.99 E-value=12 Score=34.47 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=22.6
Q ss_pred CCChHHHHHHHHHHHHhccceeecC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTS 74 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~Tn 74 (328)
++....|.+.+..|-+||||+|.|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 294 FDLKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 5777799999999999999999985
No 329
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=45.93 E-value=1.8e+02 Score=26.63 Aligned_cols=48 Identities=19% Similarity=0.176 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhcC--CCeEEEecC-----CCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 160 DFHRRRLQVLVESG--PDLLAFETI-----PNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~ET~-----~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
+.+...++.|.+.| +|.|-+..- +...+++..++.+...+ +||+||=.
T Consensus 203 ~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~~~~~~~~~~l~~~a~lG--l~v~iTEl 257 (341)
T 3niy_A 203 NFVYNMIKELKEKGVPVDGIGFQMHIDYRGLNYDSFRRNLERFAKLG--LQIYITEM 257 (341)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETTCCCHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEeeeeecCCCCCCHHHHHHHHHHHHHcC--CeEEEEec
Confidence 45667889998888 588876632 24578888888887765 99999854
No 330
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=45.71 E-value=1.8e+02 Score=26.61 Aligned_cols=226 Identities=15% Similarity=0.147 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHHhccceeecCCcCCChhhHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe-
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQATIPGFLSR-GLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA- 130 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG- 130 (328)
.|.+.+.-++-++.|-.-|..+ .......+.. |-....-.-++.+|++..++.. .+.+|..
T Consensus 58 id~l~~~~~~~~~~Gi~~v~LF--gvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~---------------pdl~vitD 120 (330)
T 1pv8_A 58 VKRLEEMLRPLVEEGLRCVLIF--GVPSRVPKDERGSAADSEESPAIEAIHLLRKTF---------------PNLLVACD 120 (330)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEE--ECC--------------CCSHHHHHHHHHHHHS---------------TTSEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEe--cCCcccCCCccccccCCCCChHHHHHHHHHHHC---------------CCeEEEEe
Confidence 3667777788899998866553 3211111221 1110011237777777776542 2345554
Q ss_pred -ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCC-C-ccEEEE
Q 020275 131 -SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENI-Q-IPSWIC 207 (328)
Q Consensus 131 -siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~-~-~pv~is 207 (328)
|+-||-..-++|--.. ...+.-++-.+...+|+-..+++|+|++.==-|.+- .+.+|.+++.+.+. + .|++ |
T Consensus 121 vcLc~YT~HGHcGil~~---~g~v~ND~Tl~~La~~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~~v~Im-s 195 (330)
T 1pv8_A 121 VCLCPYTSHGHCGLLSE---NGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDG-RVEAIKEALMAHGLGNRVSVM-S 195 (330)
T ss_dssp ECCC------------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--CC-HHHHHHHHHHHTTCTTTCEEB-C
T ss_pred eecccccCCCceeEECC---CCcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHhCCCcCCceEe-e
Confidence 4556544322221100 011445666777788888889999999986666553 56778888887653 3 4443 4
Q ss_pred EEecC-------------------CC--CCCCCCCHHHHHHHHH--hcCCceEEEECCCChhhhHHHHHHHHhhc-CCeE
Q 020275 208 FSSVD-------------------GE--NAPSGESFKECLDIIN--KSGKVNAVGINCAPPQFVENLICYFKELT-KKAI 263 (328)
Q Consensus 208 ~~~~~-------------------~~--~l~~G~~~~~~~~~~~--~~~~~~~iGvNC~~p~~~~~~l~~l~~~~-~~pl 263 (328)
-+.+- +. -.+|-..-.++++.+. -..+.+.|.|-=..| .+.+++.+++.+ +.|+
T Consensus 196 YsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~--YLDIi~~vk~~~p~~P~ 273 (330)
T 1pv8_A 196 YSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMP--YLDIVREVKDKHPDLPL 273 (330)
T ss_dssp CCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGG--GHHHHHHHHHHSTTSCE
T ss_pred hhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcc--HHHHHHHHHHhcCCCCe
Confidence 33211 11 1222223445555432 124788888876654 367788888888 8899
Q ss_pred EEEeCCCCc---cCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 264 VVYPNSGEV---WDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 264 ~~ypN~g~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
.+|--+|+- .-...+.|+.. ...+.+....++.+|+.+|
T Consensus 274 aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~I 315 (330)
T 1pv8_A 274 AVYHVSGEFAMLWHGAQAGAFDL----KAAVLEAMTAFRRAGADII 315 (330)
T ss_dssp EEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHHTCSEE
T ss_pred EEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 999999851 11223446431 2347777888899999876
No 331
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=45.68 E-value=1.6e+02 Score=25.90 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEE
Q 020275 163 RRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i 238 (328)
..+++.+++.|+|+|=+-. ++..+|++-++..+++.. ++| ||+. ....+.+-..++...+..-|
T Consensus 28 ~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~-~~p--isID---------T~~~~v~~aAl~a~~Ga~iI 95 (262)
T 1f6y_A 28 QEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS-NLT--LCLD---------STNIKAIEAGLKKCKNRAMI 95 (262)
T ss_dssp HHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC-CSE--EEEE---------CSCHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC-CCe--EEEe---------CCCHHHHHHHHhhCCCCCEE
Confidence 4466667789999986653 566778888888888642 344 5553 23333333334331233222
Q ss_pred -EECCCChhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 239 -GINCAPPQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 239 -GvNC~~p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
-+|-. .+.+..+++...+ .+.|+++.++
T Consensus 96 Ndvs~~-~d~~~~~~~~~a~-~~~~vvlmh~ 124 (262)
T 1f6y_A 96 NSTNAE-REKVEKLFPLAVE-HGAALIGLTM 124 (262)
T ss_dssp EEECSC-HHHHHHHHHHHHH-TTCEEEEESC
T ss_pred EECCCC-cccHHHHHHHHHH-hCCcEEEEcC
Confidence 23333 3433344444443 3679999887
No 332
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=45.59 E-value=1.3e+02 Score=27.52 Aligned_cols=49 Identities=10% Similarity=0.055 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhcC--CCeEEEec----C-CCH--HHHHHHHHHHHhcCCCccEEEE-EEe
Q 020275 160 DFHRRRLQVLVESG--PDLLAFET----I-PNK--LEAQALVELLEEENIQIPSWIC-FSS 210 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~ET----~-~~~--~E~~a~~~~~~~~~~~~pv~is-~~~ 210 (328)
+.+..+++.|.+.| +|.|-+.. - +.. .+++..++.+.+.+ +|+||| +.+
T Consensus 209 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~~~~~~~~~~~~l~~~a~~G--~pi~iTEldi 267 (347)
T 1xyz_A 209 NAVFNMIKSMKERGVPIDGVGFQCHFINGMSPEYLASIDQNIKRYAEIG--VIVSFTEIDI 267 (347)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCHHHHHHHHHHHHHHHHTT--CEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEeeecCCCCCchhHHHHHHHHHHHHhcC--CceEEEeccc
Confidence 44566787787778 59987642 2 222 57888888887764 999998 444
No 333
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=45.20 E-value=88 Score=27.35 Aligned_cols=91 Identities=15% Similarity=0.195 Sum_probs=54.9
Q ss_pred HHHHHHHHhcCCCeEEEecCCC----------------------HHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCC
Q 020275 163 RRRLQVLVESGPDLLAFETIPN----------------------KLEAQALVELLEEENIQIPSWICFSSVDGENAPSGE 220 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~----------------------~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~ 220 (328)
.+.++.|.++|+|+|-+-+=.+ +.....+++.+++.-.++|+.+ ++..+ .- .-.
T Consensus 34 ~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~y~n-~v--~~~ 109 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MTYYN-PI--FRI 109 (262)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE-ECCHH-HH--HHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE-EecCc-HH--HHh
Confidence 5678889999999998875222 1222334556665411589877 21110 00 001
Q ss_pred CHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhh
Q 020275 221 SFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKEL 258 (328)
Q Consensus 221 ~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~ 258 (328)
.++..++.+.+ .+++++-+....++.+..+++.++++
T Consensus 110 g~~~f~~~~~~-aG~dgvii~dl~~ee~~~~~~~~~~~ 146 (262)
T 2ekc_A 110 GLEKFCRLSRE-KGIDGFIVPDLPPEEAEELKAVMKKY 146 (262)
T ss_dssp CHHHHHHHHHH-TTCCEEECTTCCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHH-cCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 12455555554 47888888888777777777777665
No 334
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=45.17 E-value=49 Score=29.14 Aligned_cols=75 Identities=12% Similarity=-0.003 Sum_probs=45.2
Q ss_pred HHHHHHHhcCCCeEEEecCC--CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 164 RRLQVLVESGPDLLAFETIP--NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~--~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
++++.+.+.|+|.+.+.-+. +.+-++.+ .++. +.|+++-- + .++ . ++-..+ .+++-|-+|
T Consensus 42 ~~A~~~~~~Ga~~l~vvDL~~~n~~~i~~i---~~~~--~~pv~vgG-----G-ir~---~-~~~~~l---~Ga~~Viig 103 (260)
T 2agk_A 42 YYAKLYKDRDVQGCHVIKLGPNNDDAAREA---LQES--PQFLQVGG-----G-IND---T-NCLEWL---KWASKVIVT 103 (260)
T ss_dssp HHHHHHHHTTCTTCEEEEESSSCHHHHHHH---HHHS--TTTSEEES-----S-CCT---T-THHHHT---TTCSCEEEC
T ss_pred HHHHHHHHcCCCEEEEEeCCCCCHHHHHHH---HhcC--CceEEEeC-----C-CCH---H-HHHHHh---cCCCEEEEC
Confidence 35566667899999887666 55443333 3333 58888521 1 121 1 444444 256677788
Q ss_pred CC---C-----hhhhHHHHHHHH
Q 020275 242 CA---P-----PQFVENLICYFK 256 (328)
Q Consensus 242 C~---~-----p~~~~~~l~~l~ 256 (328)
+. . |+.+..+++.+.
T Consensus 104 s~a~~~~g~~~p~~~~~~~~~~g 126 (260)
T 2agk_A 104 SWLFTKEGHFQLKRLERLTELCG 126 (260)
T ss_dssp GGGBCTTCCBCHHHHHHHHHHHC
T ss_pred cHHHhhcCCCCHHHHHHHHHHhC
Confidence 86 4 777777777764
No 335
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=45.03 E-value=12 Score=34.25 Aligned_cols=25 Identities=32% Similarity=0.379 Sum_probs=22.6
Q ss_pred CCChHHHHHHHHHHHHhccceeecC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTS 74 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~Tn 74 (328)
++....|.+.+..|-+||||+|.|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 294 IDEDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 5777799999999999999999985
No 336
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=45.00 E-value=32 Score=29.36 Aligned_cols=99 Identities=9% Similarity=0.088 Sum_probs=54.6
Q ss_pred HHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEEEec----C-CCCCCCC----CCHHHHHHHHHhc
Q 020275 164 RRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICFSSV----D-GENAPSG----ESFKECLDIINKS 232 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~----~-~~~l~~G----~~~~~~~~~~~~~ 232 (328)
++++.+.+.|+|.+.+-+ ++++..+..+++ +.+ ..+.+++.+. + .-.+..+ .++.+.+..+.+
T Consensus 87 ~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~---~~g--~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~- 160 (244)
T 2y88_A 87 ESLAAALATGCARVNVGTAALENPQWCARVIG---EHG--DQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDS- 160 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHCHHHHHHHHH---HHG--GGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEECchHhhChHHHHHHHH---HcC--CCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHh-
Confidence 467888889999998764 455544444444 333 2345555543 1 1111111 144555555544
Q ss_pred CCceEEEECCCChh-----hhHHHHHHHHhhcCCeEEEEeCCC
Q 020275 233 GKVNAVGINCAPPQ-----FVENLICYFKELTKKAIVVYPNSG 270 (328)
Q Consensus 233 ~~~~~iGvNC~~p~-----~~~~~l~~l~~~~~~pl~~ypN~g 270 (328)
.++..|.++...++ .-...++++.+..+.|+++ |+|
T Consensus 161 ~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvia--~GG 201 (244)
T 2y88_A 161 EGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIA--SGG 201 (244)
T ss_dssp TTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEEE--ESC
T ss_pred CCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEEE--ECC
Confidence 46777877664321 2346777777766677654 444
No 337
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=44.72 E-value=1.7e+02 Score=26.14 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=56.8
Q ss_pred HHHHHHHhcCC-CeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 164 RRLQVLVESGP-DLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 164 ~qi~~l~~~gv-D~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
+.+.+..++|. .++..+++++.+++...++.+++.. +.|+-+.+.+... + +-..+.+.++.+.+ .++++|-++.
T Consensus 30 ~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~-~~p~~v~l~v~~~--~-~~~~~~~~~~~~~~-~g~d~V~~~~ 104 (328)
T 2gjl_A 30 EMAAAVANAGGLATLSALTQPSPEALAAEIARCRELT-DRPFGVNLTLLPT--Q-KPVPYAEYRAAIIE-AGIRVVETAG 104 (328)
T ss_dssp HHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHC-SSCCEEEEEECCC--S-SCCCHHHHHHHHHH-TTCCEEEEEE
T ss_pred HHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecccc--c-cCccHHHHHHHHHh-cCCCEEEEcC
Confidence 35556666664 5665567777888888787777754 5888888877521 0 12346677776655 3666666665
Q ss_pred CChhhhHHHHHHHHhhcCCeEEEE
Q 020275 243 APPQFVENLICYFKELTKKAIVVY 266 (328)
Q Consensus 243 ~~p~~~~~~l~~l~~~~~~pl~~y 266 (328)
..|. ..++.++.. ..+++..
T Consensus 105 g~p~---~~~~~l~~~-gi~vi~~ 124 (328)
T 2gjl_A 105 NDPG---EHIAEFRRH-GVKVIHK 124 (328)
T ss_dssp SCCH---HHHHHHHHT-TCEEEEE
T ss_pred CCcH---HHHHHHHHc-CCCEEee
Confidence 4453 344445443 4555543
No 338
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=44.60 E-value=1.8e+02 Score=26.31 Aligned_cols=93 Identities=10% Similarity=0.059 Sum_probs=58.8
Q ss_pred HHHHHHHhcCCCeEEEecCC--------------CHHHHH----HHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP--------------NKLEAQ----ALVELLEEENIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~--------------~~~E~~----a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
+.++.|.++|++.+-+|-.. +.+|.. +++++.++. +.+++|.--.+.- . ...++++
T Consensus 107 ~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~--~~d~~I~ARTDa~--~--~~gldeA 180 (307)
T 3lye_A 107 RTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRL--RSDFVLIARTDAL--Q--SLGYEEC 180 (307)
T ss_dssp HHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHT--TCCCEEEEEECCH--H--HHCHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhc--CCCeEEEEechhh--h--ccCHHHH
Confidence 35788888999999999643 445533 444443333 3667776665332 1 2347788
Q ss_pred HHHHHh--cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEE
Q 020275 226 LDIINK--SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 226 ~~~~~~--~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ 265 (328)
++.+.. ..+.++|=+-|.. ++.+..+.+.+. +.|+.+
T Consensus 181 i~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~~ 220 (307)
T 3lye_A 181 IERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLLL 220 (307)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBEE
T ss_pred HHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCceeE
Confidence 876543 2578999999864 677777766664 356543
No 339
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=44.56 E-value=76 Score=28.48 Aligned_cols=60 Identities=15% Similarity=0.253 Sum_probs=36.7
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
+++...+.|+|+|.+-.| +..+.+.+++.++ + +.|+.+| .|-+++.+.+... .++++|.+
T Consensus 208 ea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~--~-~ipi~As----------GGIt~eni~~~a~--tGvD~IsV 267 (286)
T 1x1o_A 208 ELEEALEAGADLILLDNF-PLEALREAVRRVG--G-RVPLEAS----------GNMTLERAKAAAE--AGVDYVSV 267 (286)
T ss_dssp HHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT--T-SSCEEEE----------SSCCHHHHHHHHH--HTCSEEEC
T ss_pred HHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC--C-CCeEEEE----------cCCCHHHHHHHHH--cCCCEEEE
Confidence 344444578888888886 4566666666554 2 4666543 4566766665544 35777766
No 340
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=44.56 E-value=1.9e+02 Score=26.53 Aligned_cols=111 Identities=10% Similarity=0.186 Sum_probs=65.7
Q ss_pred CCCHHHH---HHHHHHHHHHHHhcCCCeEEEecC----------C-----------CH-HH---HHHHHHHHHhc-CCCc
Q 020275 152 GVDLEKL---KDFHRRRLQVLVESGPDLLAFETI----------P-----------NK-LE---AQALVELLEEE-NIQI 202 (328)
Q Consensus 152 ~~~~~e~---~~~h~~qi~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~~~~~~-~~~~ 202 (328)
.++.+|+ .+.|.+.++...++|.|.|=+=-- | ++ +. +..+++++++. +.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4666555 455666666677899999744311 1 22 12 33456666653 4468
Q ss_pred cEEEEEEecCCCCCCCC-CCHHHHHHH---HHhcCCceEEEECCC----------ChhhhHHHHHHHHhhcCCeEEE
Q 020275 203 PSWICFSSVDGENAPSG-ESFKECLDI---INKSGKVNAVGINCA----------PPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 203 pv~is~~~~~~~~l~~G-~~~~~~~~~---~~~~~~~~~iGvNC~----------~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
|+.|-++..+- ...| .++++++.. +.+ .+++.|-+-.. .|..-..+++.+++..+.|+++
T Consensus 227 pV~vRis~~~~--~~~G~~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~ 300 (363)
T 3l5l_A 227 PLTARFGVLEY--DGRDEQTLEESIELARRFKA-GGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTS 300 (363)
T ss_dssp CEEEEEEEECS--SSCHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEE
T ss_pred eEEEEecchhc--CCCCCCCHHHHHHHHHHHHH-cCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEE
Confidence 99999987532 2235 556665544 333 46777666431 1334456778888877888765
No 341
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=44.40 E-value=12 Score=34.50 Aligned_cols=25 Identities=24% Similarity=0.449 Sum_probs=22.5
Q ss_pred CCChHHHHHHHHHHHHhccceeecC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTS 74 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~Tn 74 (328)
++....|.+.+..|-+||||+|.|.
T Consensus 305 iD~~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 305 VDLKTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEee
Confidence 5767799999999999999999985
No 342
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=44.31 E-value=2e+02 Score=26.82 Aligned_cols=28 Identities=11% Similarity=0.191 Sum_probs=24.2
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQ 77 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~ 77 (328)
++++|...++=+.--++|||+|.--+|.
T Consensus 152 ves~e~a~~~a~~~k~aGa~~vk~q~fk 179 (385)
T 3nvt_A 152 VESYEQVAAVAESIKAKGLKLIRGGAFK 179 (385)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSC
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEccccc
Confidence 5788999998888889999999888775
No 343
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=44.25 E-value=12 Score=34.15 Aligned_cols=25 Identities=24% Similarity=0.291 Sum_probs=22.5
Q ss_pred CCChHHHHHHHHHHHHhccceeecC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTS 74 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~Tn 74 (328)
++....|.+.+..|-+||||+|.|.
T Consensus 287 iD~~~~vlEsl~~~kRAGAd~IiTY 311 (323)
T 1l6s_A 287 IDEEKVVLESLGSIKRAGADLIFSY 311 (323)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeeh
Confidence 5767799999999999999999985
No 344
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=44.09 E-value=1.5e+02 Score=25.20 Aligned_cols=80 Identities=15% Similarity=0.104 Sum_probs=50.1
Q ss_pred CCceEEE--ECCC-----ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 233 GKVNAVG--INCA-----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 233 ~~~~~iG--vNC~-----~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
.+++.|- +|.. .++.+...++.+++... |+.++-= ++...+++++..+.++...+.|+.+
T Consensus 82 ~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi------------~e~~~l~~~~~~~~a~~a~eaGad~ 148 (225)
T 1mzh_A 82 DGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVI------------VETPYLNEEEIKKAVEICIEAGADF 148 (225)
T ss_dssp TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEE------------CCGGGCCHHHHHHHHHHHHHHTCSE
T ss_pred cCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEE------------EeCCCCCHHHHHHHHHHHHHhCCCE
Confidence 3567766 6764 24556666777777655 5544320 0001135667888888889999988
Q ss_pred Eeec-----CCCChHHHHHHHHHHh
Q 020275 306 IGGC-----CRTTPSTIQAVSKVLK 325 (328)
Q Consensus 306 iGGC-----CGt~P~hI~al~~~l~ 325 (328)
|=-. .|.+++.++.+++.+.
T Consensus 149 I~tstg~~~gga~~~~i~~v~~~v~ 173 (225)
T 1mzh_A 149 IKTSTGFAPRGTTLEEVRLIKSSAK 173 (225)
T ss_dssp EECCCSCSSSCCCHHHHHHHHHHHT
T ss_pred EEECCCCCCCCCCHHHHHHHHHHhC
Confidence 7311 2347799999998763
No 345
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=44.07 E-value=50 Score=29.47 Aligned_cols=28 Identities=18% Similarity=0.243 Sum_probs=25.2
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEe
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFE 180 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~E 180 (328)
-+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 66 ks~e~i~~~~~~~~~~L~~~g~d~IVIA 93 (274)
T 3uhf_A 66 KDKDTIIKFCLEALDFFEQFQIDMLIIA 93 (274)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 3889999999999999999999999874
No 346
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=43.84 E-value=1.3e+02 Score=26.16 Aligned_cols=67 Identities=19% Similarity=0.218 Sum_probs=46.1
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH---HHhcCCceEEEECCC
Q 020275 174 PDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI---INKSGKVNAVGINCA 243 (328)
Q Consensus 174 vD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~iGvNC~ 243 (328)
+|+ +.|+.++..++.+-+.+++.+..++|+|.+.... ...+.|.+.+++... +.+.+++...|+-+.
T Consensus 98 ~~~--i~sVds~~~a~~L~~~a~~~g~~~~V~LqVdtG~-e~~R~Gv~~ee~~~l~~~i~~l~~L~l~GlmTh 167 (244)
T 3r79_A 98 FDV--VESIDREKIARALSEECARQGRSLRFYVQVNTGL-EPQKAGIDPRETVAFVAFCRDELKLPVEGLMCI 167 (244)
T ss_dssp CSE--EEEECSHHHHHHHHHHHHHHTCCCEEEEEBCTTC-CTTSCSBCHHHHHHHHHHHHHTSCCCCCEEECC
T ss_pred CCE--EEeeCCHHHHHHHHHHHHHcCCCceEEEEEECCC-CcCCCCCCHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 465 4899999999988888887776788888885421 134578777766544 344456666777664
No 347
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=43.66 E-value=74 Score=29.94 Aligned_cols=49 Identities=4% Similarity=-0.179 Sum_probs=29.7
Q ss_pred hHHHHHHHHhhcC-CeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcC
Q 020275 248 VENLICYFKELTK-KAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSG 302 (328)
Q Consensus 248 ~~~~l~~l~~~~~-~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G 302 (328)
+..+++.+++... .||++.-+.+..+++. . ...+.+++.++++.+.+.|
T Consensus 224 ~~Eiv~aVr~avg~~~V~vRls~~~~~~g~-----~-~~~~~~~~~~la~~le~~G 273 (402)
T 2hsa_B 224 ITQVVQAVVSAIGADRVGVRVSPAIDHLDA-----M-DSNPLSLGLAVVERLNKIQ 273 (402)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECSSCCSTTC-----C-CSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEeccccccCCC-----C-CCCCHHHHHHHHHHHHhcC
Confidence 4556666666654 4899988765322110 0 1123566888888888888
No 348
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=43.65 E-value=55 Score=29.39 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhcC--CCeEEEec---CCCHHHHHHHHHHHHhcCCCc-cEEEE-EEec
Q 020275 160 DFHRRRLQVLVESG--PDLLAFET---IPNKLEAQALVELLEEENIQI-PSWIC-FSSV 211 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~ET---~~~~~E~~a~~~~~~~~~~~~-pv~is-~~~~ 211 (328)
+.+...++.|.+.| +|.|-+.. .+...+++..++.+... ++ |+||| +.+.
T Consensus 185 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~--G~~pi~iTEldi~ 241 (303)
T 1i1w_A 185 QAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASA--GTPEVAITELDVA 241 (303)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTT--CCSEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHC--CCCeEEEEeCCcc
Confidence 45666888887778 59998865 45567788888877765 48 99998 5554
No 349
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=43.57 E-value=50 Score=29.73 Aligned_cols=66 Identities=11% Similarity=0.118 Sum_probs=42.1
Q ss_pred HHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 164 RRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
++++..++.|+|+|.+.+| ++++++.+++.++......|+.+|=-+ +++.+.+ +.+ .++++|.+-.
T Consensus 204 eea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieASGGI----------t~eni~~-~a~-tGVD~IsvGs 269 (285)
T 1o4u_A 204 EDALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVSGGI----------TEENVSL-YDF-ETVDVISSSR 269 (285)
T ss_dssp HHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEEECC----------CTTTGGG-GCC-TTCCEEEEGG
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEECCC----------CHHHHHH-HHH-cCCCEEEEeH
Confidence 3444456689999999996 678888888888753324676666533 3333333 333 4677777655
No 350
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=43.42 E-value=2e+02 Score=26.53 Aligned_cols=228 Identities=15% Similarity=0.142 Sum_probs=131.4
Q ss_pred hHHHHHHHHHHHHhccceeecCCcCCChhhHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQATIPGFLSR-GLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
.|.+.+.-++-++.|-.-|..+ ...+...+.. |-+...-.-++.+|++..+++. .+.+|...
T Consensus 72 id~l~~~~~~~~~lGi~av~LF--gv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~---------------P~l~VitD 134 (356)
T 3obk_A 72 MEDLLKEVGEARSYGIKAFMLF--PKVDDELKSVMAEESYNPDGLLPRAIMALKEAF---------------PDVLLLAD 134 (356)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE--EECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHS---------------TTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEe--cCCCcccCCcccccccCCCChHHHHHHHHHHHC---------------CCCEEEEe
Confidence 4566667788889998765543 3322233222 2110001247777777766542 23455544
Q ss_pred --cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCC-CccEEEEE
Q 020275 132 --IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENI-QIPSWICF 208 (328)
Q Consensus 132 --iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~-~~pv~is~ 208 (328)
+-||-..-++|--... ...+.-++-.+...+|+-..+++|+|++.==-|-+- .+.+|.+++.+.+. +.|++ |-
T Consensus 135 VcLc~YT~HGHcGil~~~--~g~V~ND~Tl~~Lak~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v~IM-sY 210 (356)
T 3obk_A 135 VALDPYSSMGHDGVVDEQ--SGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDG-RVSAIRESLDMEGCTDTSIL-AY 210 (356)
T ss_dssp ECSGGGBTTCCSSCBCTT--TCCBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTSEEE-EE
T ss_pred eccccccCCCcceeeeCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeEeccccccC-HHHHHHHHHHHCCCCCccee-hh
Confidence 5566544333211110 012566777888888988899999999997766664 56777788877652 45554 55
Q ss_pred EecCC------------CC-C---------CCCCCHHHHHHHH--HhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEE
Q 020275 209 SSVDG------------EN-A---------PSGESFKECLDII--NKSGKVNAVGINCAPPQFVENLICYFKELTKKAIV 264 (328)
Q Consensus 209 ~~~~~------------~~-l---------~~G~~~~~~~~~~--~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~ 264 (328)
+.+-- .. . +|-..-.++++.+ +-..+.+.|.|-=..| .+.+++.+++.++.|+.
T Consensus 211 saKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~vMVKPal~--YLDIi~~vk~~~~~Pva 288 (356)
T 3obk_A 211 SCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLP--YLDVLAKIREKSKLPMV 288 (356)
T ss_dssp EEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSEEEEESSGG--GHHHHHHHHHHCSSCEE
T ss_pred HHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCEEEecCCCc--HHHHHHHHHhcCCCCEE
Confidence 43211 01 1 1111223444433 1124788888876544 45777778888899999
Q ss_pred EEeCCCCc---cCCccccccCCCCCChhHHHHHHHHHHHcCCeEEe
Q 020275 265 VYPNSGEV---WDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLIG 307 (328)
Q Consensus 265 ~ypN~g~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiG 307 (328)
+|--+|+- .-...+.|+.. ...+.+....++.+|+.+|=
T Consensus 289 aYqVSGEYAMikAAa~~GwiD~----~~~v~Esl~~~kRAGAd~Ii 330 (356)
T 3obk_A 289 AYHVSGEYAMLKAAAEKGYISE----KDTVLEVLKSFRRAGADAVA 330 (356)
T ss_dssp EEECHHHHHHHHHHHHHTSSCH----HHHHHHHHHHHHHHTCSEEE
T ss_pred EEEccHHHHHHHHHHHcCCccH----HHHHHHHHHHHHHcCCCEEe
Confidence 99999851 11223447432 22466777778888887663
No 351
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=43.37 E-value=2.1e+02 Score=26.77 Aligned_cols=128 Identities=13% Similarity=0.163 Sum_probs=74.1
Q ss_pred CceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEe-----cC--C-------------
Q 020275 124 NRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFE-----TI--P------------- 183 (328)
Q Consensus 124 ~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~E-----T~--~------------- 183 (328)
.++||.+-+|+- ..| +.+.+ ++.|+...++|+|++=|- |+ |
T Consensus 27 ~~~~IIAEiG~N---------H~G------sle~A----~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~ 87 (385)
T 1vli_A 27 APVFIIAEAGIN---------HDG------KLDQA----FALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDV 87 (385)
T ss_dssp SCCEEEEEEETT---------TTT------CHHHH----HHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CC
T ss_pred CCcEEEEeecCc---------ccc------cHHHH----HHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCc
Confidence 457788777762 234 33333 567888888999998653 31 1
Q ss_pred -----------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHH
Q 020275 184 -----------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLI 252 (328)
Q Consensus 184 -----------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l 252 (328)
..++.+.+.+++++.+ ++++.+.. | .+.++.+.+ .+++++=|-=..-.. .++|
T Consensus 88 ~~ye~~~~~~l~~e~~~~L~~~~~~~G--i~~~stpf--------D----~~svd~l~~-~~vd~~KIgS~~~~N-~pLL 151 (385)
T 1vli_A 88 SIFSLVQSMEMPAEWILPLLDYCREKQ--VIFLSTVC--------D----EGSADLLQS-TSPSAFKIASYEINH-LPLL 151 (385)
T ss_dssp CHHHHGGGBSSCGGGHHHHHHHHHHTT--CEEECBCC--------S----HHHHHHHHT-TCCSCEEECGGGTTC-HHHH
T ss_pred cHHHHHHhcCCCHHHHHHHHHHHHHcC--CcEEEccC--------C----HHHHHHHHh-cCCCEEEECcccccC-HHHH
Confidence 2245556667777665 77774442 1 345666654 345555443221111 3567
Q ss_pred HHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC
Q 020275 253 CYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA 303 (328)
Q Consensus 253 ~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 303 (328)
+.+.+ +++|+++.- ...+.++|...+.-+.+.|.
T Consensus 152 ~~va~-~gKPViLSt----------------GmaTl~Ei~~Ave~i~~~Gn 185 (385)
T 1vli_A 152 KYVAR-LNRPMIFST----------------AGAEISDVHEAWRTIRAEGN 185 (385)
T ss_dssp HHHHT-TCSCEEEEC----------------TTCCHHHHHHHHHHHHTTTC
T ss_pred HHHHh-cCCeEEEEC----------------CCCCHHHHHHHHHHHHHCCC
Confidence 77655 478887721 11257778777776777775
No 352
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=43.35 E-value=1.6e+02 Score=25.32 Aligned_cols=149 Identities=14% Similarity=0.079 Sum_probs=79.1
Q ss_pred CCCHHHHHHHH---HHHHHHHHhcCCCeEEEe-cCCCH----HHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHH
Q 020275 152 GVDLEKLKDFH---RRRLQVLVESGPDLLAFE-TIPNK----LEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFK 223 (328)
Q Consensus 152 ~~~~~e~~~~h---~~qi~~l~~~gvD~i~~E-T~~~~----~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~ 223 (328)
..+.+++.++- .+-++.|.++|+|+|++= |-.+. .-.+.+.+.+++.. ++|++-+. .
T Consensus 42 ~~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~-~iPv~~~~--------------~ 106 (240)
T 3ixl_A 42 SVTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREAT-GLPCTTMS--------------T 106 (240)
T ss_dssp CSSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHH-SSCEEEHH--------------H
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhcc-CCCEECHH--------------H
Confidence 35778887763 455777888999999975 22222 11123445555533 68987221 3
Q ss_pred HHHHHHHhcCCceEEEECCCChhhhHHHH-HHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHH-H-HH
Q 020275 224 ECLDIINKSGKVNAVGINCAPPQFVENLI-CYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATR-W-RD 300 (328)
Q Consensus 224 ~~~~~~~~~~~~~~iGvNC~~p~~~~~~l-~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 300 (328)
..+..++. .+.--||+=.+....+...+ +.+... +..+. .|.+-..++.. .. ...+++.+.+.+++ + ..
T Consensus 107 A~~~al~~-~g~~rvglltpy~~~~~~~~~~~l~~~-Giev~-~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~l~~~ 178 (240)
T 3ixl_A 107 AVLNGLRA-LGVRRVALATAYIDDVNERLAAFLAEE-SLVPT-GCRSLGITGVE-AM----ARVDTATLVDLCVRAFEAA 178 (240)
T ss_dssp HHHHHHHH-TTCSEEEEEESSCHHHHHHHHHHHHHT-TCEEE-EEEECCCCCHH-HH----HTCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHHHC-CCEEe-ccccCCCCCcc-hh----hcCCHHHHHHHHHHHhhcC
Confidence 44455554 34445666555433333333 334332 44433 34332222211 10 11467788988888 6 45
Q ss_pred cCC--eEEeecCCCChH-HHHHHHHHH
Q 020275 301 SGA--KLIGGCCRTTPS-TIQAVSKVL 324 (328)
Q Consensus 301 ~G~--~iiGGCCGt~P~-hI~al~~~l 324 (328)
.|+ -++| |-.-.+- .|.++.+.+
T Consensus 179 ~~adaivL~-CT~l~~l~~i~~le~~l 204 (240)
T 3ixl_A 179 PDSDGILLS-SGGLLTLDAIPEVERRL 204 (240)
T ss_dssp TTCSEEEEE-CTTSCCTTHHHHHHHHH
T ss_pred CCCCEEEEe-CCCCchhhhHHHHHHHh
Confidence 565 4555 8776543 456665554
No 353
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=43.13 E-value=1e+02 Score=27.21 Aligned_cols=124 Identities=15% Similarity=0.129 Sum_probs=61.8
Q ss_pred HHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEEC
Q 020275 162 HRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGIN 241 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvN 241 (328)
..+.++.|.++|+|+|=+- .|+ ..-+.||..+..+.....+ .+
T Consensus 34 ~~~~~~~l~~~GaD~iElg---------------------iPf--------SDP~aDGp~Iq~a~~~AL~-~G------- 76 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELG---------------------FPF--------SDPLADGPVIQGANLRSLA-AG------- 76 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEE---------------------CCC--------SCCTTCCHHHHHHHHHHHH-TT-------
T ss_pred HHHHHHHHHHcCCCEEEEC---------------------CCC--------CCCCCCCHHHHHHHHHHHH-cC-------
Confidence 4667888888999988433 332 1223466666655543322 12
Q ss_pred CCChhhhHHHHHHHHhh-cCCeEEE--EeCC----CC--ccCC---ccccccCCCCCChhHHHHHHHHHHHcCCeEEeec
Q 020275 242 CAPPQFVENLICYFKEL-TKKAIVV--YPNS----GE--VWDG---RAKKWLPSKCLGDGKFESFATRWRDSGAKLIGGC 309 (328)
Q Consensus 242 C~~p~~~~~~l~~l~~~-~~~pl~~--ypN~----g~--~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGC 309 (328)
+..+.+...++++++. .+.|+++ |-|- |. .... ...+.+--..+.+++..++.....+.|+..+==|
T Consensus 77 -~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~li 155 (267)
T 3vnd_A 77 -TTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIA 155 (267)
T ss_dssp -CCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEE
T ss_pred -CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEE
Confidence 3345556666666654 4555433 4442 10 0000 0000000011345556666666667777655444
Q ss_pred CCCC-hHHHHHHHHH
Q 020275 310 CRTT-PSTIQAVSKV 323 (328)
Q Consensus 310 CGt~-P~hI~al~~~ 323 (328)
--+| ++.|+.+.+.
T Consensus 156 aP~t~~eri~~i~~~ 170 (267)
T 3vnd_A 156 PPNADADTLKMVSEQ 170 (267)
T ss_dssp CTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHh
Confidence 4443 4666666554
No 354
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=42.94 E-value=1.8e+02 Score=25.81 Aligned_cols=154 Identities=9% Similarity=-0.060 Sum_probs=83.3
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|++-|..+ |-+ -.. .++.+|-.++.+.+++.+ .++-..|+|
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttG-E~~-----~Ls~~Er~~v~~~~~~~~-----------------~gr~pviaG 78 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTG-EGC-----SVGSRERQAILSSFIAAG-----------------IAPSRIVTG 78 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHTT-----------------CCGGGEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHHh-----------------CCCCcEEEe
Confidence 35678888888899999966543 322 111 345566666666555432 122345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecC-----CCHHHHHHHHHHHHhcCC--Ccc
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETI-----PNKLEAQALVELLEEENI--QIP 203 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~-----~~~~E~~a~~~~~~~~~~--~~p 203 (328)
. |.. +.++. .++++...+.|+|.+++=+= ++.+++..-.+.+.+... ++|
T Consensus 79 v-g~~------------------~t~~a----i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lP 135 (294)
T 3b4u_A 79 V-LVD------------------SIEDA----ADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARD 135 (294)
T ss_dssp E-CCS------------------SHHHH----HHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCC
T ss_pred C-CCc------------------cHHHH----HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCc
Confidence 4 331 22332 45666677889999887642 466676666655544311 489
Q ss_pred EEEEEEecCCCCCCCCCCHHHHHHHHHhcCC-ceEEEECCCChhhhHHHHHH
Q 020275 204 SWICFSSVDGENAPSGESFKECLDIINKSGK-VNAVGINCAPPQFVENLICY 254 (328)
Q Consensus 204 v~is~~~~~~~~l~~G~~~~~~~~~~~~~~~-~~~iGvNC~~p~~~~~~l~~ 254 (328)
+++==.. +++.-.-+.+...+..++.++ +.+|=-.|.....+..+++.
T Consensus 136 iilYn~P---~~tg~~l~~~~~~~La~~~pn~ivgiKds~gd~~~~~~~~~~ 184 (294)
T 3b4u_A 136 ILVYNIP---SVTMVTLSVELVGRLKAAFPGIVTGVKDSSGNWSHTERLLKE 184 (294)
T ss_dssp EEEEECH---HHHSCCCCHHHHHHHHHHCTTTEEEEEECCCCHHHHHHHHHH
T ss_pred EEEEECc---chhCcCCCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHh
Confidence 8853211 122122344444444424445 55554444455555555543
No 355
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=42.88 E-value=1.2e+02 Score=28.07 Aligned_cols=27 Identities=15% Similarity=0.075 Sum_probs=19.8
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCc
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSY 76 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy 76 (328)
+..++...+.-+..+++|+|+|..++-
T Consensus 95 ~g~~~~~~e~~~~a~~aGvdvI~id~a 121 (361)
T 3r2g_A 95 VGCTENELQRAEALRDAGADFFCVDVA 121 (361)
T ss_dssp ECSSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred cCCCHHHHHHHHHHHHcCCCEEEEeCC
Confidence 344555666778889999999988653
No 356
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=42.84 E-value=3.5e+02 Score=29.12 Aligned_cols=64 Identities=20% Similarity=0.283 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhcCCCeEEEe-cC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHH
Q 020275 160 DFHRRRLQVLVESGPDLLAFE-TI--PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIIN 230 (328)
Q Consensus 160 ~~h~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 230 (328)
+|+.+.++.+.+.|+|.|.+= |. -.+.++..+++++++.- ++| |++.+-++ .|..+..++..+.
T Consensus 692 ~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~--i~~H~Hnt----~G~a~An~laA~~ 758 (1150)
T 3hbl_A 692 EYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-DLP--IHLHTHDT----SGNGLLTYKQAID 758 (1150)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-CSC--EEEEECBT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc-CCe--EEEEeCCC----CcHHHHHHHHHHH
Confidence 567888899999999998764 43 56788888999988763 455 45555333 3444454444443
No 357
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=42.65 E-value=2.1e+02 Score=26.48 Aligned_cols=109 Identities=10% Similarity=0.054 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecC----------C-----------CH-HH---HHHHHHHHHhc-CCCccEEEEEE
Q 020275 156 EKLKDFHRRRLQVLVESGPDLLAFETI----------P-----------NK-LE---AQALVELLEEE-NIQIPSWICFS 209 (328)
Q Consensus 156 ~e~~~~h~~qi~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~~~~~~-~~~~pv~is~~ 209 (328)
+++.+.|.+.++...++|.|.|=+--- | ++ .. +..+++++++. +.+ |+.|.++
T Consensus 162 ~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrls 240 (377)
T 2r14_A 162 PGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRLT 240 (377)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEec
Confidence 445566666666777899999855321 1 11 22 33446666653 423 9999887
Q ss_pred ecCCC-CCCCCCCHHHHHHHHHh--cCCceEEEECCCC----hh-hhHHHHHHHHhhcCCeEEE
Q 020275 210 SVDGE-NAPSGESFKECLDIINK--SGKVNAVGINCAP----PQ-FVENLICYFKELTKKAIVV 265 (328)
Q Consensus 210 ~~~~~-~l~~G~~~~~~~~~~~~--~~~~~~iGvNC~~----p~-~~~~~l~~l~~~~~~pl~~ 265 (328)
..+.. .+.+|.++++++..++. ..++++|-+-... +. .-..+++.+++..+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~ 304 (377)
T 2r14_A 241 PFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIY 304 (377)
T ss_dssp TTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEE
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEE
Confidence 64321 13356677766544322 2577777664421 11 1134567777777888765
No 358
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=42.47 E-value=1.9e+02 Score=25.97 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=57.4
Q ss_pred ceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec---CC------CHHHHHHHHHHH
Q 020275 125 RALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET---IP------NKLEAQALVELL 195 (328)
Q Consensus 125 ~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET---~~------~~~E~~a~~~~~ 195 (328)
+.+|-|-+-=+.+++.||..|. +.+++ ..+++.+++.|+|+|=+-- -| ..+|++-++.++
T Consensus 28 ~~~iMGIlNvTPDSFsdgg~~~-------~~~~a----~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI 96 (294)
T 2dqw_A 28 RVRLLGVLNLTPDSFSDGGRYL-------DPERA----LERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVL 96 (294)
T ss_dssp SCEEEEEEECCC--------------------CC----HHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCCCCC-------CHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 3578888877778888875542 22222 4567778889999985543 22 245555555444
Q ss_pred HhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCC-CC
Q 020275 196 EEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNS-GE 271 (328)
Q Consensus 196 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~-g~ 271 (328)
+.... ..+.||+. -...+.+-+.++. +.. .||=++.......++...+ .+.|+++.++. |.
T Consensus 97 ~~l~~-~~vpiSID---------T~~~~Va~aAl~a--Ga~--iINdVsg~~d~~m~~v~a~-~~~~vVlmh~~eG~ 158 (294)
T 2dqw_A 97 EAVLS-LGVPVSVD---------TRKPEVAEEALKL--GAH--LLNDVTGLRDERMVALAAR-HGVAAVVMHMPVPD 158 (294)
T ss_dssp HHHHT-TCSCEEEE---------CSCHHHHHHHHHH--TCS--EEECSSCSCCHHHHHHHHH-HTCEEEEECCSSSC
T ss_pred HHHHh-CCCeEEEE---------CCCHHHHHHHHHh--CCC--EEEECCCCCChHHHHHHHH-hCCCEEEEcCCCCC
Confidence 43211 13345663 2223333333443 222 3565542233344443333 36899999987 64
No 359
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=42.46 E-value=64 Score=30.02 Aligned_cols=19 Identities=16% Similarity=-0.024 Sum_probs=15.0
Q ss_pred HHHHHHH-hcCCCeEEEecC
Q 020275 164 RRLQVLV-ESGPDLLAFETI 182 (328)
Q Consensus 164 ~qi~~l~-~~gvD~i~~ET~ 182 (328)
+.+..|. +.++|.|.+|.-
T Consensus 255 ~i~~~l~~~~~~d~i~lE~~ 274 (375)
T 1ypx_A 255 PVAETLFGKLNIDGFFLEYD 274 (375)
T ss_dssp GGGHHHHTTCCCSEEEEECC
T ss_pred HHHHHHHhhCCCCEEEEEec
Confidence 3567777 899999999943
No 360
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=42.14 E-value=14 Score=34.14 Aligned_cols=25 Identities=32% Similarity=0.357 Sum_probs=22.6
Q ss_pred CCChHHHHHHHHHHHHhccceeecC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTS 74 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~Tn 74 (328)
++....|.+.+..|-+||||+|.|.
T Consensus 308 iD~~~~v~Esl~~~kRAGAd~IiTY 332 (356)
T 3obk_A 308 ISEKDTVLEVLKSFRRAGADAVATY 332 (356)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHHcCCCEEehh
Confidence 5777899999999999999999985
No 361
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=41.90 E-value=42 Score=28.75 Aligned_cols=102 Identities=21% Similarity=0.276 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHH----HHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKL----EAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~----E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
++.+.+.+.+++ .+..+.|++++|+-+.+. +.....+.++.. +.|+++-.... ..++.+++..
T Consensus 94 i~~~~i~~~~~~----~l~~~~D~vlIEgaggl~~p~~~~~~~adla~~l--~~pviLV~~~~-------~~~i~~~~~~ 160 (228)
T 3of5_A 94 ISIENLKQFIED----KYNQDLDILFIEGAGGLLTPYSDHTTQLDLIKAL--QIPVLLVSAIK-------VGCINHTLLT 160 (228)
T ss_dssp CCHHHHHHHHHG----GGGSSCSEEEEEEEEETTCBSSSSCBHHHHHHHH--TCCEEEEEECS-------TTHHHHHHHH
T ss_pred CCHHHHHHHHHH----HHHccCCEEEEECCCccccccccchhHHHHHHHc--CCCEEEEEcCC-------cchHHHHHHH
Confidence 466666665553 123678999999864221 112345566655 48988766532 1234444433
Q ss_pred H---Hh-cCCceEEEECCCChh--hhHHHHHHHHhhcCCe-EEEEe
Q 020275 229 I---NK-SGKVNAVGINCAPPQ--FVENLICYFKELTKKA-IVVYP 267 (328)
Q Consensus 229 ~---~~-~~~~~~iGvNC~~p~--~~~~~l~~l~~~~~~p-l~~yp 267 (328)
+ .+ ...+.++-+|...++ .....++.+.+.++.| |++-|
T Consensus 161 ~~~l~~~~~~i~GvIlN~~~~~~~~~~~~~~~l~~~~g~pvLG~iP 206 (228)
T 3of5_A 161 INELNRHNIKLAGWIANCNDSNIKYIDEQINTIEELSGYKCSAKIS 206 (228)
T ss_dssp HHHHHHTTCCEEEEEEEECCTTCSCHHHHHHHHHHHHSCCCSEEEE
T ss_pred HHHHHhCCCcEEEEEEECcCCcchhhHHHHHHHHHhhCCCEEEECC
Confidence 2 22 235678889998653 3455677777766666 46667
No 362
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=41.86 E-value=1.9e+02 Score=25.82 Aligned_cols=154 Identities=11% Similarity=0.090 Sum_probs=86.2
Q ss_pred ChHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe
Q 020275 52 QPHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA 130 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG 130 (328)
+.+.+++.-+.++++|++-|..+ |-+ -. .-++.+|-.++.+.+++.+. ++-.+|+|
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTG-E~-----~~Ls~eEr~~vi~~~~~~~~-----------------grvpViaG 87 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTG-ES-----PTVNEDEREKLVSRTLEIVD-----------------GKIPVIVG 87 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGG-TG-----GGCCHHHHHHHHHHHHHHHT-----------------TSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcccc-ch-----hhCCHHHHHHHHHHHHHHhC-----------------CCCeEEEc
Confidence 35678888888889999966543 222 11 13465666677666665432 23345666
Q ss_pred ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 131 SIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 131 siGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
. |.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 88 v-g~~------------------st~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiil 143 (306)
T 1o5k_A 88 A-GTN------------------STEKT----LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT-DLGIVV 143 (306)
T ss_dssp C-CCS------------------CHHHH----HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC-SSCEEE
T ss_pred C-CCc------------------cHHHH----HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEE
Confidence 4 331 22332 4466666778999988754 246667666666665543 799885
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHH
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYF 255 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l 255 (328)
==.. +++.-.-+.+...+..++.+++.+|=-.|.....+..+++..
T Consensus 144 Yn~P---~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~~~~~~ 189 (306)
T 1o5k_A 144 YNVP---GRTGVNVLPETAARIAADLKNVVGIXEANPDIDQIDRTVSLT 189 (306)
T ss_dssp EECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECCCCHHHHHHHHHHH
T ss_pred EeCc---cccCcCCCHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHhc
Confidence 3321 122122345544454424455555444554555666665544
No 363
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=41.52 E-value=1.5e+02 Score=25.94 Aligned_cols=91 Identities=14% Similarity=0.070 Sum_probs=54.9
Q ss_pred HHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHh-cCCceEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINK-SGKVNAVGI 240 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~-~~~~~~iGv 240 (328)
...-++.+.++|||.+++=.+|- +|.....+++++.+ +..+.-++ .-++. +-++.+.+ ..+.. +-+
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP~-eE~~~~~~~~~~~G--l~~I~lva--------P~t~~-eRi~~ia~~a~gFi-Y~V 171 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELSF-EESDDLIKECERYN--IALITLVS--------VTTPK-ERVKKLVKHAKGFI-YLL 171 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCCG-GGCHHHHHHHHHTT--CEECEEEE--------TTSCH-HHHHHHHTTCCSCE-EEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCH-HHHHHHHHHHHHcC--CeEEEEeC--------CCCcH-HHHHHHHHhCCCeE-EEE
Confidence 35566777889999999888765 57788888888886 43322222 11222 33443433 22332 223
Q ss_pred CC---CC-----hhhhHHHHHHHHhhcCCeEEE
Q 020275 241 NC---AP-----PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 241 NC---~~-----p~~~~~~l~~l~~~~~~pl~~ 265 (328)
.- +. ++.+..+++++++.++.|+++
T Consensus 172 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 172 ASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp CCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred ecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 32 11 234677888888888888876
No 364
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=41.48 E-value=48 Score=29.93 Aligned_cols=63 Identities=10% Similarity=0.201 Sum_probs=39.9
Q ss_pred HHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 164 RRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
++++..+++|+|+|.+.+| ++.+++.+++.++ + +.++.+| .|-+++.+.++. + .+++.|++-.
T Consensus 209 ~ea~eAl~aGaD~I~LDn~-~~~~l~~av~~~~--~-~v~ieaS----------GGIt~~~i~~~a-~-tGVD~IsvGa 271 (287)
T 3tqv_A 209 DELNQAIAAKADIVMLDNF-SGEDIDIAVSIAR--G-KVALEVS----------GNIDRNSIVAIA-K-TGVDFISVGA 271 (287)
T ss_dssp HHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT--T-TCEEEEE----------SSCCTTTHHHHH-T-TTCSEEECSH
T ss_pred HHHHHHHHcCCCEEEEcCC-CHHHHHHHHHhhc--C-CceEEEE----------CCCCHHHHHHHH-H-cCCCEEEECh
Confidence 3455555689999999996 4578888887765 2 3444433 344555454444 3 5788887743
No 365
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=41.18 E-value=1.7e+02 Score=25.07 Aligned_cols=153 Identities=10% Similarity=0.164 Sum_probs=91.8
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
..+|+...++-+.-++.|.++|.. ||+.. ..+ +.+ ++.++++ + .-+.-+
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEv-t~~t~-~a~-------~~I-----------~~l~~~~----------p-~~~IGA 69 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEV-TLRTE-AGL-------AAI-----------SAIKKAV----------P-EAIVGA 69 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEE-ETTST-THH-------HHH-----------HHHHHHC----------T-TSEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEE-eCCCc-cHH-------HHH-----------HHHHHHC----------C-CCeEee
Confidence 478899999999999999999986 55532 222 111 2222332 1 223333
Q ss_pred eecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCc------c
Q 020275 130 ASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQI------P 203 (328)
Q Consensus 130 GsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~------p 203 (328)
|++ ++ .+|++...++|+||++- |... ..+++.+++.+ + |
T Consensus 70 GTV--------------------lt--------~~~a~~ai~AGA~fivs---P~~~--~evi~~~~~~~--v~~~~~~~ 114 (217)
T 3lab_A 70 GTV--------------------CT--------ADDFQKAIDAGAQFIVS---PGLT--PELIEKAKQVK--LDGQWQGV 114 (217)
T ss_dssp ECC--------------------CS--------HHHHHHHHHHTCSEEEE---SSCC--HHHHHHHHHHH--HHCSCCCE
T ss_pred ccc--------------------cC--------HHHHHHHHHcCCCEEEe---CCCc--HHHHHHHHHcC--CCccCCCe
Confidence 322 12 56888888999999985 4432 23455566553 5 7
Q ss_pred EEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCCh-hhh--HHHHHHHHhhcC-CeEEEEeCCCCccCCcccc
Q 020275 204 SWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPP-QFV--ENLICYFKELTK-KAIVVYPNSGEVWDGRAKK 279 (328)
Q Consensus 204 v~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p-~~~--~~~l~~l~~~~~-~pl~~ypN~g~~~d~~~~~ 279 (328)
++--+ .+++|+...++ .+++.|.+ .| +.+ ...|+.++.-.+ .|+ .|-+|
T Consensus 115 ~~PG~-----------~TptE~~~A~~--~Gad~vK~---FPa~~~gG~~~lkal~~p~p~i~~--~ptGG--------- 167 (217)
T 3lab_A 115 FLPGV-----------ATASEVMIAAQ--AGITQLKC---FPASAIGGAKLLKAWSGPFPDIQF--CPTGG--------- 167 (217)
T ss_dssp EEEEE-----------CSHHHHHHHHH--TTCCEEEE---TTTTTTTHHHHHHHHHTTCTTCEE--EEBSS---------
T ss_pred EeCCC-----------CCHHHHHHHHH--cCCCEEEE---CccccccCHHHHHHHHhhhcCceE--EEeCC---------
Confidence 76332 46788888765 46788876 24 222 578888875442 343 35544
Q ss_pred ccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 280 WLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
+++++ +.+|++.|+.+
T Consensus 168 ------I~~~N----~~~~l~aGa~~ 183 (217)
T 3lab_A 168 ------ISKDN----YKEYLGLPNVI 183 (217)
T ss_dssp ------CCTTT----HHHHHHSTTBC
T ss_pred ------CCHHH----HHHHHHCCCEE
Confidence 23433 45688889744
No 366
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=41.06 E-value=1.5e+02 Score=24.31 Aligned_cols=64 Identities=11% Similarity=0.047 Sum_probs=39.2
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
++.+.+.|+|++.+=-.+...++..+++.+++.+ .++.+++. +=+++.+.+..+.+ .+++.|++
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g--~~~gv~~~--------s~~~p~~~~~~~~~-~g~d~v~~ 133 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHN--KGVVVDLI--------GIEDKATRAQEVRA-LGAKFVEM 133 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECT--------TCSSHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcC--CceEEEEe--------cCCChHHHHHHHHH-hCCCEEEE
Confidence 4667789999997655556567778888888765 55545441 11234454444433 25677744
No 367
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=40.96 E-value=74 Score=31.28 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=60.3
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHH-------------HHHHHHHHhcCCCccEEEEEEecC-----------------
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEA-------------QALVELLEEENIQIPSWICFSSVD----------------- 212 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~-------------~a~~~~~~~~~~~~pv~is~~~~~----------------- 212 (328)
.+.++.++++|+|.+.+-|-. +... ..+-++.++++ +-.+++++.++.
T Consensus 350 ~~~a~~~l~aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g-~~~ivv~iD~~~~~~~~~~~~~~~~~~~~ 427 (555)
T 1jvn_A 350 LEVASLYFRSGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYG-AQAVVISVDPKRVYVNSQADTKNKVFETE 427 (555)
T ss_dssp HHHHHHHHHHTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHC-GGGEEEEECEEEEEESSGGGCSSCCEECS
T ss_pred HHHHHHHHHcCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhC-CCcEEEEEEcccccccccccccccccccc
Confidence 345677778999999988754 2211 22334455555 346888888752
Q ss_pred ----CCC-------CCCC------CCHHHHHHHHHhcCCceEEEECCCChhh-----hHHHHHHHHhhcCCeEEE
Q 020275 213 ----GEN-------APSG------ESFKECLDIINKSGKVNAVGINCAPPQF-----VENLICYFKELTKKAIVV 265 (328)
Q Consensus 213 ----~~~-------l~~G------~~~~~~~~~~~~~~~~~~iGvNC~~p~~-----~~~~l~~l~~~~~~pl~~ 265 (328)
++. ..+| .+..+.+..+.+ .++..|.+++...+. =..+++++.+..+.|+++
T Consensus 428 ~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~-~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVIa 501 (555)
T 1jvn_A 428 YPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEA-LGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIA 501 (555)
T ss_dssp SCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHH-TTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEE
T ss_pred ccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHH-cCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEEE
Confidence 110 1111 234566666655 578888887743211 246778888888889765
No 368
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=40.73 E-value=16 Score=27.34 Aligned_cols=47 Identities=21% Similarity=0.378 Sum_probs=31.2
Q ss_pred CChhhhHHHHHHHHhhcCCe----EEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHH-cC
Q 020275 243 APPQFVENLICYFKELTKKA----IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRD-SG 302 (328)
Q Consensus 243 ~~p~~~~~~l~~l~~~~~~p----l~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~G 302 (328)
..-+....+|..+.+.+..| |+.||+.+ ...+|+..++.+++|+. .|
T Consensus 28 ~~E~e~d~ll~~fe~iteHP~gSDLIfyP~~~-------------~e~SPEgIv~~IKeWRa~nG 79 (94)
T 3u43_A 28 ATEEDDNKLVREFERLTEHPDGSDLIYYPRDD-------------REDSPEGIVKEIKEWRAANG 79 (94)
T ss_dssp SSHHHHHHHHHHHHHHHCCTTTTHHHHSCCTT-------------SCSSHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCCCccCeeeeCCCC-------------CCCCHHHHHHHHHHHHHHcC
Confidence 34455666777766655433 67777653 12479999999999964 34
No 369
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=40.59 E-value=2.1e+02 Score=25.90 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=74.0
Q ss_pred HHHHHHHHhcCCCeEEEecCC--CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIP--NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~--~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.+.++.|.+.|+|.|=+- +| +..+.+.+.++.+... -+-+..+.... -..++.+++.+.. .++..|.+
T Consensus 31 l~ia~~L~~~Gv~~IE~g-~p~~~~~d~e~v~~i~~~~~--~~~i~~l~r~~------~~~i~~a~~al~~-ag~~~v~i 100 (325)
T 3eeg_A 31 IIVAKALDELGVDVIEAG-FPVSSPGDFNSVVEITKAVT--RPTICALTRAK------EADINIAGEALRF-AKRSRIHT 100 (325)
T ss_dssp HHHHHHHHHHTCSEEEEE-CTTSCHHHHHHHHHHHHHCC--SSEEEEECCSC------HHHHHHHHHHHTT-CSSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEe-CCCCCHhHHHHHHHHHHhCC--CCEEEEeecCC------HHHHHHHHHhhcc-cCCCEEEE
Confidence 445667888999977443 44 4666655544444332 22333342110 0124455555443 34555544
Q ss_pred -------------CCCCh---hhhHHHHHHHHhhcCCeEEE-EeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC
Q 020275 241 -------------NCAPP---QFVENLICYFKELTKKAIVV-YPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA 303 (328)
Q Consensus 241 -------------NC~~p---~~~~~~l~~l~~~~~~pl~~-ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 303 (328)
||+.. +.+...++..+.. ...+.+ -|.++ ..+++.+.+.++++.+.|+
T Consensus 101 ~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~-g~~v~f~~~d~~--------------~~~~~~~~~~~~~~~~~G~ 165 (325)
T 3eeg_A 101 GIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV-VHEVEFFCEDAG--------------RADQAFLARMVEAVIEAGA 165 (325)
T ss_dssp EEECSHHHHC----CCCTTGGGTTHHHHHHHHTT-SSEEEEEEETGG--------------GSCHHHHHHHHHHHHHHTC
T ss_pred EecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEccccc--------------cchHHHHHHHHHHHHhcCC
Confidence 45432 2344455555443 222222 12111 1368888999999999999
Q ss_pred eEEeecC---CCChHHHHHHHHHHh
Q 020275 304 KLIGGCC---RTTPSTIQAVSKVLK 325 (328)
Q Consensus 304 ~iiGGCC---Gt~P~hI~al~~~l~ 325 (328)
..|.=|= ..+|..+..+-+.++
T Consensus 166 ~~i~l~DT~G~~~P~~v~~lv~~l~ 190 (325)
T 3eeg_A 166 DVVNIPDTTGYMLPWQYGERIKYLM 190 (325)
T ss_dssp SEEECCBSSSCCCHHHHHHHHHHHH
T ss_pred CEEEecCccCCcCHHHHHHHHHHHH
Confidence 8776432 248999988877765
No 370
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=40.55 E-value=1.9e+02 Score=26.72 Aligned_cols=145 Identities=10% Similarity=-0.061 Sum_probs=78.1
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhc--CCceEE
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKECLDIINKS--GKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~--~~~~~i 238 (328)
.++++.+.+.|.|.|=+-.- +++.+...+++++++. +.+.++.+-. ..|-+++++++.++.. .++..|
T Consensus 167 ~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDa--------n~~~~~~~a~~~~~~l~~~~i~~i 238 (393)
T 2og9_A 167 MVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDA--------NQQWDRPTAQRMCRIFEPFNLVWI 238 (393)
T ss_dssp HHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEEC--------TTCCCHHHHHHHHHHHGGGCCSCE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEEC--------CCCCCHHHHHHHHHHHHhhCCCEE
Confidence 45666666788888754322 3677778888888874 5567776632 2466788887766432 233333
Q ss_pred EECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCc------cccccCCCC---CChhHHHHHHHHHHHcCCeEEeec
Q 020275 239 GINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGR------AKKWLPSKC---LGDGKFESFATRWRDSGAKLIGGC 309 (328)
Q Consensus 239 GvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~------~~~~~~~~~---~~~~~~~~~~~~~~~~G~~iiGGC 309 (328)
==-| .++. ...++.+++.++.|+++==+.-...+.. ..+.+.-+. =...+..+.+......|+.+.-+|
T Consensus 239 E~P~-~~~~-~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 239 EEPL-DAYD-HEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLAPHF 316 (393)
T ss_dssp ECCS-CTTC-HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred ECCC-Cccc-HHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHcCCEEeccC
Confidence 2112 2233 3556677777778887522211111000 000110000 022344555555667899998888
Q ss_pred CCCChHHH
Q 020275 310 CRTTPSTI 317 (328)
Q Consensus 310 CGt~P~hI 317 (328)
|+..--|+
T Consensus 317 ~~~~~~~l 324 (393)
T 2og9_A 317 AMELHVHL 324 (393)
T ss_dssp CHHHHHHH
T ss_pred ccHHHHHH
Confidence 87543333
No 371
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=40.48 E-value=2.1e+02 Score=29.42 Aligned_cols=136 Identities=15% Similarity=0.201 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEe------cCCC-----HHHHHHHHHHHHhc-C--CCccEEEEEEecCCCCCCCCC
Q 020275 155 LEKLKDFHRRRLQVLVESGPDLLAFE------TIPN-----KLEAQALVELLEEE-N--IQIPSWICFSSVDGENAPSGE 220 (328)
Q Consensus 155 ~~e~~~~h~~qi~~l~~~gvD~i~~E------T~~~-----~~E~~a~~~~~~~~-~--~~~pv~is~~~~~~~~l~~G~ 220 (328)
.+++...|++.++.|.++|++.|=+. .++. ...++.++++++.. + .+..+.+-+ |..+
T Consensus 584 l~dLA~ayreeI~~L~~AGa~~IQIDEPaL~~~L~~~~~d~~~~l~~a~~aln~a~gv~~~~~I~lH~-C~G~------- 655 (766)
T 1t7l_A 584 AYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLAANARPETQIHAHM-CYSD------- 655 (766)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECTHHHHTSCSSGGGHHHHHHHHHHHHHHHTCCCTTSEEEEEC-CCSC-------
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccCCCcchhHHHHHHHHHHHHHHhhcCCCCceEEEEE-ecCc-------
Confidence 47788899999999999999987432 2232 23344556666543 1 123333222 3221
Q ss_pred CHHHHHHHHHhcCCceEEEECCCC-hhhhHHHHHHHHhh--cCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHH
Q 020275 221 SFKECLDIINKSGKVNAVGINCAP-PQFVENLICYFKEL--TKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATR 297 (328)
Q Consensus 221 ~~~~~~~~~~~~~~~~~iGvNC~~-p~~~~~~l~~l~~~--~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~ 297 (328)
+.+.+..+.+ .++++|++-... .. .+++.+... .++-+++ . ++|. ...|++ ++++..+.+++
T Consensus 656 -~~di~~~L~~-l~VD~IsLE~~Rs~~---elL~~l~~~p~~~k~L~l-G----VVD~-rn~~ve----d~EeI~~rI~~ 720 (766)
T 1t7l_A 656 -FNEIIEYIHQ-LEFDVISIEASRSKG---EIISAFENFKGWIKQIGV-G----VWDI-HSPAVP----SINEMREIVER 720 (766)
T ss_dssp -CTTTHHHHTT-SCCSEEEEECTTTTT---GGGHHHHTSTTCCSEEEE-E----CSCT-TSCSCC----CHHHHHHHHHH
T ss_pred -hHHHHHHHHc-CCCCEEEEecCCCch---hHHHHHHhccccCCeEEE-E----EECC-CCCCCC----CHHHHHHHHHH
Confidence 1244555554 578999999653 33 333434321 1222221 1 1332 233544 58888888888
Q ss_pred HHHc-CCe--EEeecCCCC
Q 020275 298 WRDS-GAK--LIGGCCRTT 313 (328)
Q Consensus 298 ~~~~-G~~--iiGGCCGt~ 313 (328)
..+. |.. +|.=-||-.
T Consensus 721 a~~~Vg~erL~VsPdCGL~ 739 (766)
T 1t7l_A 721 VLRVLPKELIWINPDCGLK 739 (766)
T ss_dssp HTTTSCGGGEEEECSSCCT
T ss_pred HHHhcCcccEEEeCCCCCC
Confidence 7654 654 789999864
No 372
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=40.42 E-value=2.3e+02 Score=27.48 Aligned_cols=42 Identities=12% Similarity=0.029 Sum_probs=21.7
Q ss_pred CHHHHHHHHHHHHHHHHhcC---CCeEEEecCCCHHHHHHHHHHH
Q 020275 154 DLEKLKDFHRRRLQVLVESG---PDLLAFETIPNKLEAQALVELL 195 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~g---vD~i~~ET~~~~~E~~a~~~~~ 195 (328)
..+++++.-++.++.|.+++ +.++.-.++.+.+|++.+++.+
T Consensus 23 ~~~~v~~~~~~~~~~l~~~~~l~~~vv~~g~v~t~~~~~~~~~~~ 67 (500)
T 4f2d_A 23 TLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDA 67 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSSEEEECCCBCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCCeEEEecCcCCCHHHHHHHHHHh
Confidence 44555555555555554432 4555555555555555554444
No 373
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=40.11 E-value=57 Score=28.83 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=45.3
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHH---HHHHHHHhcCCceEEEECCC
Q 020275 174 PDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFK---ECLDIINKSGKVNAVGINCA 243 (328)
Q Consensus 174 vD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~---~~~~~~~~~~~~~~iGvNC~ 243 (328)
.|+ ..++.|+.+++.+-+++++.+..++|+|-+..-.+ .-+.|-+.+ ++++.+.+.+++...|+-|.
T Consensus 135 ~~l--~~~Vds~~~l~~L~~~a~~~~~~~~V~lkVdtGme-~~R~G~~~ee~~~l~~~i~~~~~l~l~Gl~th 204 (282)
T 3cpg_A 135 VDT--IESVDSIDLAEKISRRAVARGITVGVLLEVNESGE-ESKSGCDPAHAIRIAQKIGTLDGIELQGLMTI 204 (282)
T ss_dssp CSE--EEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSC-TTSSSBCGGGHHHHHHHHHTCTTEEEEEEECC
T ss_pred CCE--EEEeCCHHHHHHHHHHHHhcCCCceEEEEEECCCC-CCCCCcCHHHHHHHHHHHHhCCCceEEeEEEE
Confidence 555 46889999999888877776656788887764221 134665544 44555555567888899885
No 374
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=40.04 E-value=1.9e+02 Score=27.19 Aligned_cols=75 Identities=13% Similarity=0.231 Sum_probs=45.1
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCC-----------CCCCCCCHHHHH---HHHHh
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGE-----------NAPSGESFKECL---DIINK 231 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~-----------~l~~G~~~~~~~---~~~~~ 231 (328)
++.+++.|+..+ ++-|..|++.+.+.+++.+...+|++-+....+. .-.-|.+.+++. +.+.+
T Consensus 136 i~~a~~~gv~~~---~vds~~el~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG~~~sKfG~~~~~~~~~~~~~~~ 212 (441)
T 3n2b_A 136 MKRALQLKIKCF---NVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHS 212 (441)
T ss_dssp HHHHHHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHHHHHH
T ss_pred HHHHHHCCCCEE---EEcCHHHHHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccCCCCCcccCCHHHHHHHHHHHhc
Confidence 333445677655 4567889988888887766556777766543111 133565555444 44444
Q ss_pred cCCceEEEECCC
Q 020275 232 SGKVNAVGINCA 243 (328)
Q Consensus 232 ~~~~~~iGvNC~ 243 (328)
.+++...|+-|.
T Consensus 213 ~~~l~l~Glh~H 224 (441)
T 3n2b_A 213 LPNLDVHGIDCH 224 (441)
T ss_dssp CTTEEEEEEECC
T ss_pred CCCeEEEEEEEe
Confidence 456677788773
No 375
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=40.02 E-value=1.9e+02 Score=25.48 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEe
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFE 180 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~E 180 (328)
.+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIa 91 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIA 91 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 3789999999999999999999999874
No 376
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=39.98 E-value=50 Score=28.55 Aligned_cols=39 Identities=18% Similarity=0.276 Sum_probs=27.5
Q ss_pred HHHHHHhcCCCeE--EEec-CCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 165 RLQVLVESGPDLL--AFET-IPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 165 qi~~l~~~gvD~i--~~ET-~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
.++.+.++|+|++ ..|+ -++ +..+++.+++.+ ..+.+++
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~~~---~~~~i~~i~~~G--~k~gv~l 113 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETINGQ---AFRLIDEIRRHD--MKVGLIL 113 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCTTT---HHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHcCCCEEEECcccCCcc---HHHHHHHHHHcC--CeEEEEE
Confidence 3577888999998 4576 444 456778888775 6666666
No 377
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=39.86 E-value=1e+02 Score=26.88 Aligned_cols=87 Identities=10% Similarity=0.158 Sum_probs=55.1
Q ss_pred CHHHHHHHHHhcCCceEEEECCCC----hhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHH
Q 020275 221 SFKECLDIINKSGKVNAVGINCAP----PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFAT 296 (328)
Q Consensus 221 ~~~~~~~~~~~~~~~~~iGvNC~~----p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~ 296 (328)
+.+.|++++.+ .+...+=+==.. -+.+..+.+.-. +.-+.+-|-+| ++.+.|.+.++
T Consensus 146 ~vetAiaml~d-mG~~SvKffPm~Gl~~l~E~~avAka~a---~~g~~lEPTGG---------------Idl~N~~~I~~ 206 (249)
T 3m0z_A 146 PLETAIALLKD-MGGSSIKYFPMGGLKHRAEFEAVAKACA---AHDFWLEPTGG---------------IDLENYSEILK 206 (249)
T ss_dssp EHHHHHHHHHH-TTCCEEEECCCTTTTTHHHHHHHHHHHH---HTTCEEEEBSS---------------CCTTTHHHHHH
T ss_pred eHHHHHHHHHH-cCCCeeeEeecCCcccHHHHHHHHHHHH---HcCceECCCCC---------------ccHhhHHHHHH
Confidence 67788887765 455555443321 122222222222 22236666655 45678999999
Q ss_pred HHHHcCC---------eEE-eecCCCChHHHHHHHHHHhc
Q 020275 297 RWRDSGA---------KLI-GGCCRTTPSTIQAVSKVLKE 326 (328)
Q Consensus 297 ~~~~~G~---------~ii-GGCCGt~P~hI~al~~~l~~ 326 (328)
-.++.|+ +|| -..-.|.|++++.|-..++.
T Consensus 207 i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~ 246 (249)
T 3m0z_A 207 IALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQ 246 (249)
T ss_dssp HHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHH
Confidence 9999997 445 67788999999998877764
No 378
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=39.84 E-value=71 Score=29.24 Aligned_cols=50 Identities=8% Similarity=-0.068 Sum_probs=34.9
Q ss_pred HHHHHHHhcCCCeEEEecCCC---HHHHHHHHHHHHhcCCCccEEEEEEecCCCC
Q 020275 164 RRLQVLVESGPDLLAFETIPN---KLEAQALVELLEEENIQIPSWICFSSVDGEN 215 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~---~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~ 215 (328)
..++.+++.|++.|++|++.+ ..++..+++.+.+. ++||+++-.|..+.-
T Consensus 233 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--Gi~VV~~Sr~~~G~v 285 (332)
T 2wlt_A 233 DLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQM--GVVIVRSSRVGSGGV 285 (332)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSSSCC
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCCCc
Confidence 467788888999999998765 24444445444444 499998888765544
No 379
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=39.62 E-value=1.7e+02 Score=24.69 Aligned_cols=81 Identities=21% Similarity=0.290 Sum_probs=44.8
Q ss_pred HHHHHHHHhcCCCeEEEecC----CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEE
Q 020275 163 RRRLQVLVESGPDLLAFETI----PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i 238 (328)
.+.++.+.++|+|.|.+=.. .........++.+++. .++|+++.-.+. +..++-..+.. ++++|
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~iPvi~~Ggi~---------~~~~~~~~~~~--Gad~V 101 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISATHEERAILLDVVARVAER-VFIPLTVGGGVR---------SLEDARKLLLS--GADKV 101 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT-CCSCEEEESSCC---------SHHHHHHHHHH--TCSEE
T ss_pred HHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh-CCCCEEEECCcC---------CHHHHHHHHHc--CCCEE
Confidence 45777888899998765211 1222222233444443 269999754331 24444444442 57888
Q ss_pred EECCCC---hhhhHHHHHHH
Q 020275 239 GINCAP---PQFVENLICYF 255 (328)
Q Consensus 239 GvNC~~---p~~~~~~l~~l 255 (328)
.+.... |+.+..+.+.+
T Consensus 102 ~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 102 SVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp EECHHHHHCTHHHHHHHHHH
T ss_pred EEChHHHhCcHHHHHHHHHc
Confidence 887753 54555555554
No 380
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=39.30 E-value=2.4e+02 Score=29.74 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhcCCCeEEEecC---------------CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHH
Q 020275 161 FHRRRLQVLVESGPDLLAFETI---------------PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKEC 225 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~ET~---------------~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~ 225 (328)
.|.+.++.+.++|+|.|-+--- .+..-+..+++++++.- ++|+++-++. +.+++.+.
T Consensus 649 ~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~-------~~~~~~~~ 720 (1025)
T 1gte_A 649 DWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTP-------NVTDIVSI 720 (1025)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECS-------CSSCHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCC-------ChHHHHHH
Confidence 3455567777789999987421 34455667788888763 6999988752 34456777
Q ss_pred HHHHHhcCCceEEEE
Q 020275 226 LDIINKSGKVNAVGI 240 (328)
Q Consensus 226 ~~~~~~~~~~~~iGv 240 (328)
+..+.+ .++++|-+
T Consensus 721 a~~~~~-~G~d~i~v 734 (1025)
T 1gte_A 721 ARAAKE-GGADGVTA 734 (1025)
T ss_dssp HHHHHH-HTCSEEEE
T ss_pred HHHHHH-cCCCEEEE
Confidence 766654 36777766
No 381
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=39.27 E-value=17 Score=33.41 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=21.9
Q ss_pred CCChHHHHHHHHHHHHhccceeecC
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTS 74 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~Tn 74 (328)
++ ...|.+.+..|-+||||+|.|.
T Consensus 301 iD-~~~v~Esl~~~kRAGAd~IiTY 324 (337)
T 1w5q_A 301 LA-ESVILESLTAFKRAGADGILTY 324 (337)
T ss_dssp SC-TTHHHHHHHHHHHHTCSEEEET
T ss_pred cc-HHHHHHHHHHHHhcCCCEEeee
Confidence 57 7799999999999999999985
No 382
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=39.26 E-value=1.8e+02 Score=24.66 Aligned_cols=89 Identities=12% Similarity=0.036 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcCCCeEEEec------C-----C-----------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCC
Q 020275 162 HRRRLQVLVESGPDLLAFET------I-----P-----------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSG 219 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET------~-----~-----------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G 219 (328)
..+.++.+.++ +|.|-+-+ + + ++.....+++.+++.. ++|+.+-...+. ....
T Consensus 21 ~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~~~~--~~~~- 95 (248)
T 1geq_A 21 TLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNP--IYRA- 95 (248)
T ss_dssp HHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEECHHH--HHHH-
T ss_pred HHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEeccch--hhhc-
Confidence 35678888888 99998872 1 1 4444556667777653 688775432111 0000
Q ss_pred CCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHh
Q 020275 220 ESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKE 257 (328)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~ 257 (328)
...+.++.+.+ .++++|-+.+..++....+++.+++
T Consensus 96 -~~~~~~~~~~~-~Gad~v~~~~~~~~~~~~~~~~~~~ 131 (248)
T 1geq_A 96 -GVRNFLAEAKA-SGVDGILVVDLPVFHAKEFTEIARE 131 (248)
T ss_dssp -CHHHHHHHHHH-HTCCEEEETTCCGGGHHHHHHHHHH
T ss_pred -CHHHHHHHHHH-CCCCEEEECCCChhhHHHHHHHHHH
Confidence 01333443333 2455555555444444444444443
No 383
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=39.07 E-value=36 Score=30.94 Aligned_cols=50 Identities=10% Similarity=0.120 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhcC--CCeEEEec-----CCCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 160 DFHRRRLQVLVESG--PDLLAFET-----IPNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
+.+..+++.|.+.| +|.|-+.. .|+..+++..++.+... ++||||| +.+.
T Consensus 183 ~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~~~a~~--G~pv~iTEldi~ 240 (313)
T 1v0l_A 183 QAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAAL--GVDVAITELDIQ 240 (313)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTT--TCEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHHHHHhc--CCeEEEEeCCcc
Confidence 34456788887777 59987753 34567788888888766 4899998 5453
No 384
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=39.07 E-value=2.1e+02 Score=27.24 Aligned_cols=20 Identities=5% Similarity=0.019 Sum_probs=15.4
Q ss_pred ChhHHHHHHHHHHHcCCeEE
Q 020275 287 GDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 287 ~~~~~~~~~~~~~~~G~~ii 306 (328)
+.+++.+.++.+.+.|+..|
T Consensus 309 ~~ed~~~iA~~~~~aGaDgI 328 (443)
T 1tv5_A 309 NQEQKKEIADVLLETNIDGM 328 (443)
T ss_dssp CHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 45678888888889997544
No 385
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A
Probab=39.03 E-value=58 Score=32.04 Aligned_cols=50 Identities=10% Similarity=0.058 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcC--CCeEEEe-----cCCCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 160 DFHRRRLQVLVESG--PDLLAFE-----TIPNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 160 ~~h~~qi~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
+.+..+++.|.+.| +|.|-+. ..|++.+++.+++.+... ++|+||| +.+.
T Consensus 360 ~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p~~~~i~~~L~~~a~l--GlpI~ITElDv~ 417 (530)
T 1us2_A 360 TKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMKKVVDL--GLLVKITELDVA 417 (530)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT--TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceeEEEEeeecCCCCCCHHHHHHHHHHHHhc--CCeEEEEeCccC
Confidence 44667888888778 5998764 357899999999888866 4999999 4443
No 386
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=38.67 E-value=2.2e+02 Score=25.56 Aligned_cols=167 Identities=17% Similarity=0.171 Sum_probs=92.9
Q ss_pred CCChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEE
Q 020275 50 IKQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVA 129 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~Va 129 (328)
.++.+.+.++ .++|||-|.-++ .|..-|+++. ..++ +.+++. ..+-|-
T Consensus 46 ~~s~~~a~~A----~~gGAdRIELc~------~l~~GGlTPS--~g~i-------~~a~~~-------------~~ipV~ 93 (287)
T 3iwp_A 46 VDSVESAVNA----ERGGADRIELCS------GLSEGGTTPS--MGVL-------QVVKQS-------------VQIPVF 93 (287)
T ss_dssp ESSHHHHHHH----HHHTCSEEEECB------CGGGTCBCCC--HHHH-------HHHHTT-------------CCSCEE
T ss_pred eCCHHHHHHH----HHhCCCEEEECC------CCCCCCCCCC--HHHH-------HHHHHh-------------cCCCeE
Confidence 4677776665 789999999872 3334455442 1222 222221 123455
Q ss_pred eecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCH--HHHHHHHHHHHhcCCCccEEEE
Q 020275 130 ASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNK--LEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 130 GsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~--~E~~a~~~~~~~~~~~~pv~is 207 (328)
-=|=|.+. +| -++.+|+... ++.|+.+.+.|+|.|.|--+..- .+.....++++..+ .+++ +
T Consensus 94 vMIRPRgG----------dF--~Ys~~E~~~M-~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~-~l~v--T 157 (287)
T 3iwp_A 94 VMIRPRGG----------DF--LYSDREIEVM-KADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR-PLPV--T 157 (287)
T ss_dssp EECCSSSS----------CS--CCCHHHHHHH-HHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT-TSCE--E
T ss_pred EEEecCCC----------Cc--ccCHHHHHHH-HHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC-CCcE--E
Confidence 56678753 22 1366776555 44688899999999999843211 12233334444333 3443 3
Q ss_pred EE--ecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCCh--hhhHHHHHHHHhhcCCeEEEEeCCCC
Q 020275 208 FS--SVDGENAPSGESFKECLDIINKSGKVNAVGINCAPP--QFVENLICYFKELTKKAIVVYPNSGE 271 (328)
Q Consensus 208 ~~--~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p--~~~~~~l~~l~~~~~~pl~~ypN~g~ 271 (328)
|. ++ .. .+..++++.+.+. +++-|...=..| ..-.+.|+++.+.....+.+.|-+|.
T Consensus 158 FHRAFD---~~---~d~~~Ale~Li~l-GvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV 218 (287)
T 3iwp_A 158 FHRAFD---MV---HDPMAALETLLTL-GFERVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGI 218 (287)
T ss_dssp ECGGGG---GC---SCHHHHHHHHHHH-TCSEEEECTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTC
T ss_pred EECchh---cc---CCHHHHHHHHHHc-CCCEEECCCCCCChHHhHHHHHHHHHHhCCCCEEEECCCc
Confidence 43 21 11 1256777777653 677777755432 33445666666555556777788874
No 387
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=38.55 E-value=2.2e+02 Score=25.54 Aligned_cols=109 Identities=18% Similarity=0.168 Sum_probs=66.0
Q ss_pred ChHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
+.+.+++.-+.++++|+|-|..+==..-.. -++.+|-.++.+.+++.+. ++-.+|+|.
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~v~~~~v~~~~-----------------grvpViaGv 88 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEFY-----ALSLEEAKEEVRRTVEYVH-----------------GRALVVAGI 88 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcc-----cCCHHHHHHHHHHHHHHhC-----------------CCCcEEEEe
Confidence 357888888888899999776552111111 2455666677666655442 233456664
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
|. . .++. .++++...+.|+|.+++=+ -++.+++..-.+.+.+.. ++|+++=
T Consensus 89 -g~-~------------------t~~a----i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilY 143 (316)
T 3e96_A 89 -GY-A------------------TSTA----IELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEAL-DFPSLVY 143 (316)
T ss_dssp -CS-S------------------HHHH----HHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHH-TSCEEEE
T ss_pred -Cc-C------------------HHHH----HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEE
Confidence 53 1 1222 4456666778999998643 246677766666655543 5998864
No 388
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=38.29 E-value=1.6e+02 Score=26.68 Aligned_cols=109 Identities=12% Similarity=0.126 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHhcC--CCeE--EEecCC----------CHHHH----HHHHHHHHhcC--CCccEEEEEEecCCCC
Q 020275 156 EKLKDFHRRRLQVLVESG--PDLL--AFETIP----------NKLEA----QALVELLEEEN--IQIPSWICFSSVDGEN 215 (328)
Q Consensus 156 ~e~~~~h~~qi~~l~~~g--vD~i--~~ET~~----------~~~E~----~a~~~~~~~~~--~~~pv~is~~~~~~~~ 215 (328)
+.+++|-+..++.|.+.| ||++ ..|... +...+ +++.+++|+.. ...++++.+. ...
T Consensus 108 ~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~--~~~- 184 (334)
T 1fob_A 108 WQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLD--DGW- 184 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEES--CTT-
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcC--CcC-
Confidence 344455566778887766 5664 335332 22333 23356677653 3456655542 211
Q ss_pred CCCCCCHHHHHHHHHhcC-----CceEEEECCC---C----hhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 216 APSGESFKECLDIINKSG-----KVNAVGINCA---P----PQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 216 l~~G~~~~~~~~~~~~~~-----~~~~iGvNC~---~----p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
+-..+......+.... ..+.||+|.= + ++.+...|+.+.+..++|+++-=++
T Consensus 185 --~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~itEtG 248 (334)
T 1fob_A 185 --SWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVETN 248 (334)
T ss_dssp --CHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred --chHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 1001111222222222 4799999983 1 4556666777755568999875554
No 389
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=38.24 E-value=79 Score=29.02 Aligned_cols=122 Identities=14% Similarity=0.098 Sum_probs=72.2
Q ss_pred ChHHHHHHHHHHHHhcc----------ce----ee-cCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 020275 52 QPHLVKRVHLEYLEAGA----------DI----LV-TSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVK 116 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGA----------di----I~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~ 116 (328)
.++.+++..++|++.=+ || +. ..+|+-+.. ....| .+++..|++.||++..+...
T Consensus 102 ~~~~l~~~~~~~I~~v~~rY~g~i~~WDVvNE~~~~~g~~r~s~~-~~~lG------~~~i~~aF~~Ar~a~~~~~d--- 171 (335)
T 4f8x_A 102 TAKELTAVMKNHIFKTVQHFGRRCYSWDVVNEALNGDGTFSSSVW-YDTIG------EEYFYLAFKYAQEALAQIGA--- 171 (335)
T ss_dssp CHHHHHHHHHHHHHHHHHHHGGGCSEEEEEESCBCTTSSBCCCHH-HHHHC------THHHHHHHHHHHHHHHHTTC---
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCceEEEEecCccCCCCccccCch-hhhcC------HHHHHHHHHHHHHhccccCC---
Confidence 46667777777776321 23 22 235555432 12223 36889999999998654210
Q ss_pred cCCCCCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCC--CeEEEec------CCCHHHH
Q 020275 117 KVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGP--DLLAFET------IPNKLEA 188 (328)
Q Consensus 117 ~~~~~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gv--D~i~~ET------~~~~~E~ 188 (328)
++-+.++ ++ |.-.+. . .-.+.+...++.|.+.|+ |.|-+.. .|+..++
T Consensus 172 -----P~a~L~~-------ND-------Yn~e~~---~--~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~p~~~~~ 227 (335)
T 4f8x_A 172 -----NDVKLYY-------ND-------YGIENP---G--TKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGETPSLADQ 227 (335)
T ss_dssp -----TTSEEEE-------EE-------SSCSSS---S--HHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCCCCHHHH
T ss_pred -----CCcEEEE-------ec-------ccccCC---c--HhHHHHHHHHHHHHHCCCCcceeeeeeeecCCCCCCHHHH
Confidence 1112222 11 221110 1 123456778899988775 8876552 5788899
Q ss_pred HHHHHHHHhcCCCccEEEEEE
Q 020275 189 QALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 189 ~a~~~~~~~~~~~~pv~is~~ 209 (328)
+..++.+...+ +||+||=-
T Consensus 228 ~~~l~~~a~lG--l~v~iTEl 246 (335)
T 4f8x_A 228 LATKQAYIKAN--LDVAVTEL 246 (335)
T ss_dssp HHHHHHHHHTT--CEEEEEEE
T ss_pred HHHHHHHHHcC--CeeEEeec
Confidence 99999888775 99999843
No 390
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=38.24 E-value=2.3e+02 Score=25.61 Aligned_cols=95 Identities=13% Similarity=0.107 Sum_probs=61.1
Q ss_pred HHHHHHHhcCCCeEEEecCC--------------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP--------------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
+-++.|.++|++.+-+|-.. +.+|...-++++++.+ .+++|.-..+... ...++++++..
T Consensus 108 ~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~--~~~~I~ARtda~~----~~g~~~ai~Ra 181 (305)
T 3ih1_A 108 RTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA--PSLYIVARTDARG----VEGLDEAIERA 181 (305)
T ss_dssp HHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC--TTSEEEEEECCHH----HHCHHHHHHHH
T ss_pred HHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC--CCeEEEEeecccc----ccCHHHHHHHH
Confidence 35788888999999999643 4567777777777664 6777666543321 12366776544
Q ss_pred Hh--cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 230 NK--SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 230 ~~--~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
.. ..++++|=+-|.. ++. ++++.+..+.|+++-+-
T Consensus 182 ~ay~eAGAD~i~~e~~~~~~~----~~~i~~~~~~P~~~n~~ 219 (305)
T 3ih1_A 182 NAYVKAGADAIFPEALQSEEE----FRLFNSKVNAPLLANMT 219 (305)
T ss_dssp HHHHHHTCSEEEETTCCSHHH----HHHHHHHSCSCBEEECC
T ss_pred HHHHHcCCCEEEEcCCCCHHH----HHHHHHHcCCCEEEeec
Confidence 32 1478999999974 344 44445555688866443
No 391
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=38.02 E-value=1.9e+02 Score=24.80 Aligned_cols=45 Identities=13% Similarity=0.232 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCeEEEec-CC---------------------CHHHHHHHHHHHHhcCCCccEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFET-IP---------------------NKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET-~~---------------------~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
..+.++.+.++|+|+|-+-+ ++ ++.+....++.+++. .++|+++-
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m 100 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLL 100 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEE
Confidence 46678889999999998863 11 456666677777776 37998763
No 392
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=38.02 E-value=1.4e+02 Score=26.86 Aligned_cols=80 Identities=29% Similarity=0.391 Sum_probs=47.9
Q ss_pred eEEEecchHHHHHHCCCCCCCc-----------cchhhhcCCChHHHHHHHHHHHHhccceeecC---CcCCChhhHHhC
Q 020275 21 CAVIDGGFATQLETHGASINDP-----------LWSALYLIKQPHLVKRVHLEYLEAGADILVTS---SYQATIPGFLSR 86 (328)
Q Consensus 21 ~lvlDGg~gt~L~~~G~~~~~~-----------lws~~~ll~~Pe~V~~iH~~yl~AGAdiI~Tn---Ty~as~~~l~~~ 86 (328)
+-++||-+-..|+..|+.+... |.+ -+...+|+..+++ .+||+|+|... |..-..-. ..
T Consensus 131 vglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~T-i~~v~~~eeA~am----A~agpDiI~~h~glT~gglIG~--~~ 203 (286)
T 2p10_A 131 VGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLT-TPYVFSPEDAVAM----AKAGADILVCHMGLTTGGAIGA--RS 203 (286)
T ss_dssp GGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEE-CCEECSHHHHHHH----HHHTCSEEEEECSCC-----------
T ss_pred cccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeE-EEecCCHHHHHHH----HHcCCCEEEECCCCCCCCcccC--CC
Confidence 4578999999999998765321 121 1224677776654 79999998743 22211111 12
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 020275 87 GLSIEEAESLLEKSVTLAVEA 107 (328)
Q Consensus 87 g~~~~~~~~l~~~av~lA~~a 107 (328)
..+.++..++.+..++.+++.
T Consensus 204 avs~~~~~e~i~~i~~a~~~v 224 (286)
T 2p10_A 204 GKSMDDCVSLINECIEAARTI 224 (286)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHhHHHHHHHHHHHHHh
Confidence 345566677888888777765
No 393
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=38.01 E-value=1.6e+02 Score=28.18 Aligned_cols=85 Identities=16% Similarity=0.208 Sum_probs=49.9
Q ss_pred HHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCc-cCCccccccCCCCCChhHHHHHHHHHH-
Q 020275 222 FKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEV-WDGRAKKWLPSKCLGDGKFESFATRWR- 299 (328)
Q Consensus 222 ~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~- 299 (328)
+.+.+...++..+.....|||.+++.+..+|+..... +.|+++....+.+ +.+ .|. +.+|+.|..+++...
T Consensus 8 mkelL~~ak~g~~~gi~av~~~n~e~i~Ail~aAee~-~sPVIIe~t~~qv~~~g---GYt---G~~p~~f~~~V~~~A~ 80 (450)
T 3txv_A 8 LIDIARWSERPGPRGIPSICSAHPLVIEAAMLRAHRE-KAPVLIEATCNQVNQDG---GYT---GMTPEDFTRFVGAIAD 80 (450)
T ss_dssp -------------CCEEEECCCCHHHHHHHHHHHHHS-CSCEEEEEETTTSCTTC---TTT---TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEeCcCCHHHHHHHHHHHHHh-CCCEEEEcChhhHhhcC---CCC---CCCHHHHHHHHHHHHH
Confidence 4455555444334567889999999999999887653 5787776554432 111 111 246788999998875
Q ss_pred HcCCe----EEeecCCCC
Q 020275 300 DSGAK----LIGGCCRTT 313 (328)
Q Consensus 300 ~~G~~----iiGGCCGt~ 313 (328)
+.|+. +++|-=|.+
T Consensus 81 ~~~vPv~pV~LhlDHg~~ 98 (450)
T 3txv_A 81 RIEFPREKILLGGDHLGP 98 (450)
T ss_dssp HTTCCGGGEEEEEEEESS
T ss_pred HcCcCcccEEEECCCCCC
Confidence 56876 899987754
No 394
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=37.56 E-value=1.1e+02 Score=27.04 Aligned_cols=121 Identities=18% Similarity=0.088 Sum_probs=72.9
Q ss_pred hcCCCeEEEe--c--CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC--
Q 020275 171 ESGPDLLAFE--T--IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP-- 244 (328)
Q Consensus 171 ~~gvD~i~~E--T--~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~-- 244 (328)
..-+|++=|- | +..-+.++..++.+++.+ +++..-=++-+- .+..| .+.+.++.+++ .+.++|=|+-..
T Consensus 36 g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~g--V~v~~GGTl~E~-~~~qg-~~~~yl~~~k~-lGf~~iEiS~G~i~ 110 (251)
T 1qwg_A 36 GDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWG--IKVYPGGTLFEY-AYSKG-KFDEFLNECEK-LGFEAVEISDGSSD 110 (251)
T ss_dssp GGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTT--CEEEECHHHHHH-HHHTT-CHHHHHHHHHH-HTCCEEEECCSSSC
T ss_pred hhhcceEEecCceeeecCHHHHHHHHHHHHHcC--CeEECCcHHHHH-HHHcC-cHHHHHHHHHH-cCCCEEEECCCccc
Confidence 3568998665 3 334445888899999875 555421111000 01112 56666777765 478888888853
Q ss_pred --hhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeE
Q 020275 245 --PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKL 305 (328)
Q Consensus 245 --p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 305 (328)
.+....+++.+++. -+-+.+..|.. + ......++++.|.+.+++.+++||..
T Consensus 111 l~~~~~~~~I~~~~~~---G~~v~~EvG~k-~-----~~~~~~~~~~~~I~~~~~~LeAGA~~ 164 (251)
T 1qwg_A 111 ISLEERNNAIKRAKDN---GFMVLTEVGKK-M-----PDKDKQLTIDDRIKLINFDLDAGADY 164 (251)
T ss_dssp CCHHHHHHHHHHHHHT---TCEEEEEECCS-S-----HHHHTTCCHHHHHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHC---CCEEeeecccc-C-----CcccCCCCHHHHHHHHHHHHHCCCcE
Confidence 35566677777653 23345655531 1 10112357999999999999999844
No 395
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=37.34 E-value=94 Score=28.11 Aligned_cols=62 Identities=15% Similarity=0.222 Sum_probs=37.4
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
+++..+++|+|.|.+.+| ++.+++.+++.+. + +.++.+| .|-+++.+.++. + .+++.|++-.
T Consensus 221 e~~eAl~aGaD~I~LDn~-~~~~l~~av~~i~--~-~v~ieaS----------GGI~~~~i~~~a-~-tGVD~isvG~ 282 (298)
T 3gnn_A 221 QLRTALAHGARSVLLDNF-TLDMMRDAVRVTE--G-RAVLEVS----------GGVNFDTVRAIA-E-TGVDRISIGA 282 (298)
T ss_dssp HHHHHHHTTCEEEEEESC-CHHHHHHHHHHHT--T-SEEEEEE----------SSCSTTTHHHHH-H-TTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC--C-CCeEEEE----------cCCCHHHHHHHH-H-cCCCEEEECC
Confidence 344455689999999986 4677777777652 2 2333333 244444444444 3 4788887765
No 396
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=37.17 E-value=1e+02 Score=26.59 Aligned_cols=127 Identities=12% Similarity=0.061 Sum_probs=0.0
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCC------CCCCCCCHHHHHHHHHh-cCCceEE
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGE------NAPSGESFKECLDIINK-SGKVNAV 238 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~------~l~~G~~~~~~~~~~~~-~~~~~~i 238 (328)
++.+.+.|+|++-+=.....+-++.+++.+++.+...|-.+.++..... .+.-..+..+.+..+.. ..+..+.
T Consensus 85 i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~ 164 (245)
T 1eix_A 85 VAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLD 164 (245)
T ss_dssp HHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCC
Q ss_pred EECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 239 GINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 239 GvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
|+-|...+ ...++++.. +.++.+-|.-+ ......+......-..+.++.|+.++
T Consensus 165 g~V~~~~e--i~~lr~~~~--~~~i~v~gGI~----------~~g~~~~dq~rv~t~~~a~~aGad~i 218 (245)
T 1eix_A 165 GVVCSAQE--AVRFKQVFG--QEFKLVTPGIR----------PQGSEAGDQRRIMTPEQALSAGVDYM 218 (245)
T ss_dssp EEECCGGG--HHHHHHHHC--SSSEEEECCBC----------CTTCCCTTCCSCBCHHHHHHTTCSEE
T ss_pred eEEeCHHH--HHHHHHhcC--CCCEEEECCcC----------CCCCCccchhccCCHHHHHHcCCCEE
No 397
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=37.15 E-value=1.7e+02 Score=26.96 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=45.1
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCC--CHHHHHH-HHHhc--CCceEEEE
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGE--SFKECLD-IINKS--GKVNAVGI 240 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~--~~~~~~~-~~~~~--~~~~~iGv 240 (328)
++.+.+.|+|.|-+..-.++.|++..+ +....++ -.++.. .| .|+ .+.+.+. .++.. .+-..++.
T Consensus 266 l~~l~~~g~d~i~~d~~~dl~~ak~~~------g~~~~l~--Gnldp~-~L-~gt~e~I~~~v~~~l~~~g~~~g~I~n~ 335 (368)
T 4exq_A 266 LEDLAATGVDAVGLDWTVNLGRARERV------AGRVALQ--GNLDPT-IL-FAPPEAIRAEARAVLDSYGNHPGHVFNL 335 (368)
T ss_dssp HHHHHTSSCSEEECCTTSCHHHHHHHH------TTSSEEE--EEECGG-GG-GSCHHHHHHHHHHHHHHHCSCSCEEEEE
T ss_pred HHHHHHhCCCEEeeCCCCCHHHHHHHh------CCCEEEE--ECCCHH-Hh-CCCHHHHHHHHHHHHHHhCCCCCEEEeC
Confidence 445677899999888777887765332 3123333 333332 23 454 2333332 23321 12356777
Q ss_pred CCC-----ChhhhHHHHHHHHhh
Q 020275 241 NCA-----PPQFVENLICYFKEL 258 (328)
Q Consensus 241 NC~-----~p~~~~~~l~~l~~~ 258 (328)
.|. .|+.+..+++..++.
T Consensus 336 Ghgi~p~tp~Env~a~veav~~~ 358 (368)
T 4exq_A 336 GHGISQFTPPEHVAELVDEVHRH 358 (368)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHh
Confidence 785 256777777666553
No 398
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=36.95 E-value=2.1e+02 Score=24.97 Aligned_cols=150 Identities=12% Similarity=0.123 Sum_probs=76.6
Q ss_pred CCHHHHHHHH---HHHHHHHHhcCCCeEEEecCCCH-----HHHHHHHHHHHhc----CCCccEEEEEEecCCCCCCCCC
Q 020275 153 VDLEKLKDFH---RRRLQVLVESGPDLLAFETIPNK-----LEAQALVELLEEE----NIQIPSWICFSSVDGENAPSGE 220 (328)
Q Consensus 153 ~~~~e~~~~h---~~qi~~l~~~gvD~i~~ET~~~~-----~E~~a~~~~~~~~----~~~~pv~is~~~~~~~~l~~G~ 220 (328)
++++++...- .+.++.|.+.|+|+|++-+.+.. .....+++.+++. ..+.|++-+
T Consensus 67 v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~~~~~~~iPv~~~------------- 133 (273)
T 2xed_A 67 VSPEGLAAMNAQRERCVLEIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQLATGGSQALVRSS------------- 133 (273)
T ss_dssp CSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHHHHTTCCCEEEEH-------------
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHHhhccCCCCCEecH-------------
Confidence 4677766553 44667788899999997754421 0012223333332 225887722
Q ss_pred CHHHHHHHHHhcCCceEEEECCCChhhhHHHH-HHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHH
Q 020275 221 SFKECLDIINKSGKVNAVGINCAPPQFVENLI-CYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWR 299 (328)
Q Consensus 221 ~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l-~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (328)
...++..+.. .+..-|||=......+.... +.+... ...+ +.|..-..++.. + ....+++.+.+.++++.
T Consensus 134 -~~A~~~al~~-~g~~rvgvltp~~~~~~~~~~~~l~~~-Gi~v-~~~~~~~~~~~~-~----~g~~~~~~l~~~~~~l~ 204 (273)
T 2xed_A 134 -AGALVEGLRA-LDAQRVALVTPYMRPLAEKVVAYLEAE-GFTI-SDWRALEVADNT-E----VGCIPGEQVMAAARSLD 204 (273)
T ss_dssp -HHHHHHHHHH-TTCCEEEEEECSCHHHHHHHHHHHHHT-TCEE-EEEEECCCCBHH-H----HHTCCHHHHHHHHHHSC
T ss_pred -HHHHHHHHHH-cCCCeEEEEcCChhhhHHHHHHHHHHC-CCEE-eccccCCCccch-h----hcccCHHHHHHHHHHHh
Confidence 1334444443 23334555554444344333 334432 3333 334332222211 0 00135667888888876
Q ss_pred HcCC-eEEee-cCCCCh-HHHHHHHHHH
Q 020275 300 DSGA-KLIGG-CCRTTP-STIQAVSKVL 324 (328)
Q Consensus 300 ~~G~-~iiGG-CCGt~P-~hI~al~~~l 324 (328)
+.|+ -||=| |-+-.. ..+..+.+.+
T Consensus 205 ~~gadaIvLg~CT~l~~~~~~~~le~~l 232 (273)
T 2xed_A 205 LSEVDALVISCAVQMPSLPLVETAEREF 232 (273)
T ss_dssp CTTCSEEEEESSSSSCCTTHHHHHHHHH
T ss_pred hCCCCEEEEcCCCCcchHHhHHHHHHHh
Confidence 6676 44555 888876 4677776554
No 399
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=36.92 E-value=1.3e+02 Score=26.83 Aligned_cols=67 Identities=19% Similarity=0.246 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 020275 90 IEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQV- 168 (328)
Q Consensus 90 ~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~- 168 (328)
..+.+++++..++.+-+.+... +-+.+|.|.+|. | .|+. +.+++.+.+++.+..
T Consensus 189 ~~~~~~~l~~rir~vL~iA~~~-----------g~~~LVLGA~GC-G-----------vfgn--pp~~VA~~~~~vL~~~ 243 (277)
T 3sig_A 189 VEEIGRVLRGRAAKVLAAARHH-----------GHRRLVLGAWGC-G-----------VFGN--DPAQVAETFAGLLLDG 243 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-----------TCCEEEECCTTS-S-----------TTCC--CHHHHHHHHHHHHSTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHc-----------CCCEEEECCccc-C-----------cCCC--CHHHHHHHHHHHHhhc
Confidence 3466777888787777776653 467899999986 4 3544 778898888877652
Q ss_pred --HHhcCCCeEEEecC
Q 020275 169 --LVESGPDLLAFETI 182 (328)
Q Consensus 169 --l~~~gvD~i~~ET~ 182 (328)
+. ...+-|+|=-+
T Consensus 244 ~~f~-~~f~~VvFAv~ 258 (277)
T 3sig_A 244 GPFA-GRFAHVVFAVW 258 (277)
T ss_dssp CTTT-TTCSEEEEECC
T ss_pred chhc-CCceEEEEEEe
Confidence 22 34555555433
No 400
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=36.58 E-value=92 Score=27.02 Aligned_cols=49 Identities=18% Similarity=0.214 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
-+.+++.++-.+.++.|.+.|+|+|++=..+.. ..+++.+++.- ++||+
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~---~~~~~~lr~~~-~iPvi 90 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVACNTAS---ALALEEMQKYS-KIPIV 90 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHH---HHTHHHHHHHC-SSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhC-CCCEE
Confidence 378999999999999999999999986542221 11455566543 57876
No 401
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=36.46 E-value=2.4e+02 Score=25.35 Aligned_cols=74 Identities=12% Similarity=0.064 Sum_probs=49.1
Q ss_pred HHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCC
Q 020275 164 RRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCA 243 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~ 243 (328)
+.+.+..++|.-.++.-...+.++++..++.+++.. +.|+-+.+.+.+ ..+.+.++.+.+ .+++.|-++..
T Consensus 41 ~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~-~~p~gVnl~~~~-------~~~~~~~~~~~~-~g~d~V~l~~g 111 (326)
T 3bo9_A 41 TLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKT-DKPFGVNIILVS-------PWADDLVKVCIE-EKVPVVTFGAG 111 (326)
T ss_dssp HHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTC-SSCEEEEEETTS-------TTHHHHHHHHHH-TTCSEEEEESS
T ss_pred HHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhc-CCCEEEEEeccC-------CCHHHHHHHHHH-CCCCEEEECCC
Confidence 355666667765555556668888888888888653 589988887521 235667766654 46777777776
Q ss_pred Chh
Q 020275 244 PPQ 246 (328)
Q Consensus 244 ~p~ 246 (328)
.|.
T Consensus 112 ~p~ 114 (326)
T 3bo9_A 112 NPT 114 (326)
T ss_dssp CCH
T ss_pred CcH
Confidence 553
No 402
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}
Probab=36.14 E-value=85 Score=28.65 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhcCC--CeEEEe-------------cCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 160 DFHRRRLQVLVESGP--DLLAFE-------------TIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 160 ~~h~~qi~~l~~~gv--D~i~~E-------------T~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
+.+...++.|.+.|+ |.|-+. ..|++.+++..++.+... ++||+||=.
T Consensus 184 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p~~~~~~~~l~~~a~l--Gl~v~iTEl 246 (327)
T 3u7b_A 184 EGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTPSRAKLASVLQGLADL--GVDVAYTEL 246 (327)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCCCHHHHHHHHHHHHTT--TCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEcccccccccccccCCCCCHHHHHHHHHHHHhc--CCceEEEec
Confidence 456678898988774 887443 358889999999998866 499999853
No 403
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=36.14 E-value=66 Score=27.19 Aligned_cols=43 Identities=7% Similarity=0.273 Sum_probs=28.8
Q ss_pred HHHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 164 RRLQVLVESGPDLLAFETI--PNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
..++.+.+.|+|++.+=-. +. .+...+++.+++.+ +++++++.
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g--~~ig~~~~ 126 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG--AKAGVVLN 126 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT--SEEEEEEC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC--CcEEEEeC
Confidence 4677777899999865444 33 34456677777654 77888874
No 404
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=35.96 E-value=2.7e+02 Score=25.81 Aligned_cols=175 Identities=15% Similarity=0.127 Sum_probs=90.4
Q ss_pred cCCChHHHHHHHHHHHH-hccc-eeecCCcCCChhhHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCc
Q 020275 49 LIKQPHLVKRVHLEYLE-AGAD-ILVTSSYQATIPGFLS-RGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNR 125 (328)
Q Consensus 49 ll~~Pe~V~~iH~~yl~-AGAd-iI~TnTy~as~~~l~~-~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~ 125 (328)
++..++.++++=++|++ +-+| |+-.=. +.+|....+ .|++.+++-+.+..+++ ++..++ +-.
T Consensus 87 vl~t~ed~~r~a~e~~ed~a~dgV~Y~Ei-rf~P~~~~~~~Gl~~~~vv~av~~g~~---~a~~~~-----------gi~ 151 (380)
T 4gxw_A 87 LLTRPDDLRRIAYEYLEDAAAHNVRHAEF-FWNPTGTVRVSGIPYADAQAAIVTGMR---DAARDF-----------GIG 151 (380)
T ss_dssp TCCSHHHHHHHHHHHHHHHHTTTEEEEEE-EECHHHHHHTTCCCHHHHHHHHHHHHH---HHHHHH-----------CCE
T ss_pred HcCCHHHHHHHHHHHHHHHHHCCCeEEEE-EcCHHHhccccCCCHHHHHHHHHHHHH---HHHHhc-----------CCc
Confidence 56788888888888885 3333 332222 234555443 68886555444444443 333333 112
Q ss_pred eEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc---CCCeEEEecCCCHHHHHHHHHHHHhcCCCc
Q 020275 126 ALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVES---GPDLLAFETIPNKLEAQALVELLEEENIQI 202 (328)
Q Consensus 126 ~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~---gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~ 202 (328)
+.+.-|+ - +..+.++..+..... ...... |+|+---|.-........+.+.+++.+ +
T Consensus 152 ~rlI~~~---~--------------R~~~~e~a~~~~~~a-~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~G--l 211 (380)
T 4gxw_A 152 ARLIPSI---D--------------REQDPDEAVAIVDWM-KANRADEVAGIGIDYRENDRPPELFWKAYRDARAAG--F 211 (380)
T ss_dssp EEEEEEE---E--------------TTSCHHHHHHHHHHH-HHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHTT--C
T ss_pred EEEEEee---c--------------CCCCHHHHHHHHHHH-HHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHcC--C
Confidence 2222221 0 112445554433221 222222 457777787666666677788888775 6
Q ss_pred cEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 203 PSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 203 pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
|+.+= +-+.+ ..++++.+++..+. ..-.+-|++|.. |+.+ +.+++. +.||=+-|-+
T Consensus 212 ~~t~H--AGE~~--~p~~~i~~al~~lg--a~RIgHG~~~~~d~~L~----~~l~~~-~I~lEvCP~S 268 (380)
T 4gxw_A 212 RTTAH--AGEFG--MPWRNVETAVDLLH--VDRVDHGYTIVDNPELC----ARYAER-GIVFTVVPTN 268 (380)
T ss_dssp EEEEE--ESCTT--CCHHHHHHHHHTSC--CSEEEECGGGGGCHHHH----HHHHHH-TCEEEECTTC
T ss_pred Ceeee--ccccC--CchHHHHHHHHHcC--CcccccceeeccChHHH----HHHHHh-CceeEECCcc
Confidence 66543 32211 01235556665442 345678899974 5433 333322 4677776754
No 405
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=35.95 E-value=2.3e+02 Score=25.12 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHHhccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCC-CceEEEee
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNY-NRALVAAS 131 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~-~~~~VaGs 131 (328)
.+.+++.-+.++++|++-|..+==..-.. -++.+|-.++.+.+++.+. + +-..|+|
T Consensus 27 ~~~l~~lv~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~-----------------g~rvpviaG- 83 (301)
T 3m5v_A 27 EQSYARLIKRQIENGIDAVVPVGTTGESA-----TLTHEEHRTCIEIAVETCK-----------------GTKVKVLAG- 83 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSSTTTTGG-----GSCHHHHHHHHHHHHHHHT-----------------TSSCEEEEE-
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC-----------------CCCCeEEEe-
Confidence 56788888888899999766542111111 2455666677666665442 2 2345665
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEec----CCCHHHHHHHHHHHHhcCCCccEEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFET----IPNKLEAQALVELLEEENIQIPSWIC 207 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~is 207 (328)
+|.. +.++. .++++...+.|+|.+++=+ -|+.+++..-.+.+.+.. ++|+++=
T Consensus 84 vg~~------------------~t~~a----i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilY 140 (301)
T 3m5v_A 84 AGSN------------------ATHEA----VGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV-DIPVLLY 140 (301)
T ss_dssp CCCS------------------SHHHH----HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred CCCC------------------CHHHH----HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEE
Confidence 3331 22332 4566667788999998764 246667666666665543 7999854
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHH
Q 020275 208 FSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICY 254 (328)
Q Consensus 208 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~ 254 (328)
=. .+++.-.-+.+...+..+..+++.+|=--|.....+..+++.
T Consensus 141 n~---P~~tg~~l~~~~~~~La~~~pnivgiKdssgd~~~~~~~~~~ 184 (301)
T 3m5v_A 141 NV---PGRTGCEISTDTIIKLFRDCENIYGVKEASGNIDKCVDLLAH 184 (301)
T ss_dssp EC---HHHHSCCCCHHHHHHHHHHCTTEEEEEECSSCHHHHHHHHHH
T ss_pred eC---chhhCcCCCHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHHh
Confidence 32 122222344554444443215554444444445555555443
No 406
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=35.73 E-value=10 Score=20.82 Aligned_cols=8 Identities=50% Similarity=1.526 Sum_probs=6.4
Q ss_pred ecCCCChH
Q 020275 308 GCCRTTPS 315 (328)
Q Consensus 308 GCCGt~P~ 315 (328)
||||.-|.
T Consensus 1 gccg~ypn 8 (26)
T 1p1p_A 1 GCCGSYPN 8 (26)
T ss_dssp CCSTTSCC
T ss_pred CccccCCC
Confidence 79998774
No 407
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=35.50 E-value=1.4e+02 Score=29.31 Aligned_cols=148 Identities=16% Similarity=0.106 Sum_probs=70.6
Q ss_pred HHHHHHHHHhcCCCeEEE-ecCCCHHH----HHHHHHHHHhcCCCccEEEEEEec------CC-CCCC-CCCCHHHHHHH
Q 020275 162 HRRRLQVLVESGPDLLAF-ETIPNKLE----AQALVELLEEENIQIPSWICFSSV------DG-ENAP-SGESFKECLDI 228 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~-ET~~~~~E----~~a~~~~~~~~~~~~pv~is~~~~------~~-~~l~-~G~~~~~~~~~ 228 (328)
+.++++.++++|+++|-+ |--.+..| ++.+.+.+++. +.|++|.=.++ -+ -++. +..++.++-+.
T Consensus 27 l~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~--~v~liIND~~dlA~~~gAdGVHLgq~dl~~~~ar~~ 104 (540)
T 3nl6_A 27 LYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAH--NVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKL 104 (540)
T ss_dssp HHHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHT--TCCEEECSCSHHHHHTTCSEEEECTTSSCHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhc--CCEEEEeCcHHHHHHcCCCEEEEChhhcCHHHHHHH
Confidence 467888888999999977 32223333 34444455554 48887632110 01 1221 11234433333
Q ss_pred HHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHH-----cCC
Q 020275 229 INKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRD-----SGA 303 (328)
Q Consensus 229 ~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~G~ 303 (328)
+ . ++ .-||+.|..++.+..+.+.- ...-..+++ |.+|...+|.-.....+.++.+.+....+.+ .-+
T Consensus 105 l-g-~~-~iiG~S~ht~eea~~A~~~G-~~~aDYv~~----Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPv 176 (540)
T 3nl6_A 105 V-G-PD-MVIGWSVGFPEEVDELSKMG-PDMVDYIGV----GTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRT 176 (540)
T ss_dssp H-C-TT-SEEEEEECSHHHHHHHHHTC-C--CCEEEE----SCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEE
T ss_pred h-C-CC-CEEEEECCCHHHHHHHHHcC-CCCCCEEEE----cCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCE
Confidence 2 2 22 35899998776655443210 000245555 3344433331110001234334444333322 223
Q ss_pred eEEeecCCCChHHHHHHHH
Q 020275 304 KLIGGCCRTTPSTIQAVSK 322 (328)
Q Consensus 304 ~iiGGCCGt~P~hI~al~~ 322 (328)
-.||| .+|+.+.++.+
T Consensus 177 vAIGG---I~~~ni~~v~~ 192 (540)
T 3nl6_A 177 VGIGG---LHPDNIERVLY 192 (540)
T ss_dssp EEESS---CCTTTHHHHHH
T ss_pred EEEcC---CCHHHHHHHHH
Confidence 44675 78988888765
No 408
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=35.27 E-value=2.6e+02 Score=25.39 Aligned_cols=149 Identities=14% Similarity=0.123 Sum_probs=84.8
Q ss_pred CCCHHHH---HHHHHHHHHHHHhcCCCeEEEecC----------C-----------CH-HH---HHHHHHHHHhcCCCcc
Q 020275 152 GVDLEKL---KDFHRRRLQVLVESGPDLLAFETI----------P-----------NK-LE---AQALVELLEEENIQIP 203 (328)
Q Consensus 152 ~~~~~e~---~~~h~~qi~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~~~~~~~~~~p 203 (328)
.++.+|+ .+.|.+-++...++|.|.|=+--- | ++ .. +..+++++++.- +.|
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 4676655 455666666677899998844321 1 12 12 345566666654 789
Q ss_pred EEEEEEecCCCCCCCCCCHHH---HHHHHHhcCCceEEEECCC---------ChhhhHHHHHHHHhhcCCeEEEEeCCCC
Q 020275 204 SWICFSSVDGENAPSGESFKE---CLDIINKSGKVNAVGINCA---------PPQFVENLICYFKELTKKAIVVYPNSGE 271 (328)
Q Consensus 204 v~is~~~~~~~~l~~G~~~~~---~~~~~~~~~~~~~iGvNC~---------~p~~~~~~l~~l~~~~~~pl~~ypN~g~ 271 (328)
++|-++..+- ...|.++++ .+..+.+ .+++.|=+-.. .+..-..+++.+++..+.|+++ |+|.
T Consensus 212 v~vRls~~~~--~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~--~GgI 286 (340)
T 3gr7_A 212 LFVRISASDY--HPDGLTAKDYVPYAKRMKE-QGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGA--VGLI 286 (340)
T ss_dssp EEEEEESCCC--STTSCCGGGHHHHHHHHHH-TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEE--ESSC
T ss_pred eEEEeccccc--cCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEe--eCCC
Confidence 9999986532 234555554 4444544 47787766431 2333456788888888888765 3321
Q ss_pred ccCCccccccCCCCCChhHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHHHHH
Q 020275 272 VWDGRAKKWLPSKCLGDGKFESFATRWRDSG-AKLIGGCCR--TTPSTIQAVSKVL 324 (328)
Q Consensus 272 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~iiGGCCG--t~P~hI~al~~~l 324 (328)
.+++ .+.+.++.| +..|+=+=. .+|+-.+.+++.+
T Consensus 287 --------------~s~e----~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l 324 (340)
T 3gr7_A 287 --------------TSGW----QAEEILQNGRADLVFLGRELLRNPYWPYAAAREL 324 (340)
T ss_dssp --------------CCHH----HHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHT
T ss_pred --------------CCHH----HHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHC
Confidence 0232 233455566 665553322 2566666666554
No 409
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=35.21 E-value=2.3e+02 Score=26.16 Aligned_cols=145 Identities=10% Similarity=-0.011 Sum_probs=77.5
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhc-CCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhc--CCceEE
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEE-NIQIPSWICFSSVDGENAPSGESFKECLDIINKS--GKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~--~~~~~i 238 (328)
.++++...+.|.|.|=+-.- +++.+....++++++. +.+.++.+-. ..|-+++++++.++.. .++..|
T Consensus 180 ~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~d~~l~vDa--------n~~~~~~~ai~~~~~l~~~~i~~i 251 (398)
T 2pp0_A 180 LKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDA--------NQQWDRETAIRMGRKMEQFNLIWI 251 (398)
T ss_dssp HHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHHCSSSCEEEEC--------TTCSCHHHHHHHHHHHGGGTCSCE
T ss_pred HHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHcCCCCeEEEEC--------CCCCCHHHHHHHHHHHHHcCCcee
Confidence 44556666778887754322 3677778888888874 5467776533 1456788887766432 233333
Q ss_pred EECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCC------ccccccCCCC---CChhHHHHHHHHHHHcCCeEEeec
Q 020275 239 GINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDG------RAKKWLPSKC---LGDGKFESFATRWRDSGAKLIGGC 309 (328)
Q Consensus 239 GvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~------~~~~~~~~~~---~~~~~~~~~~~~~~~~G~~iiGGC 309 (328)
==-| .++. ...++.+++..+.|+++==+.-...+. ...+.+.-+. =...+..+.+......|+.++.+|
T Consensus 252 EqP~-~~~d-~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~ 329 (398)
T 2pp0_A 252 EEPL-DAYD-IEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLAPHF 329 (398)
T ss_dssp ECCS-CTTC-HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred eCCC-Chhh-HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 2222 2333 355567777777887652111110000 0000100000 023344555566678899998888
Q ss_pred CCCChHHH
Q 020275 310 CRTTPSTI 317 (328)
Q Consensus 310 CGt~P~hI 317 (328)
|+.+--|+
T Consensus 330 ~~~~~~~l 337 (398)
T 2pp0_A 330 AMEVHLHL 337 (398)
T ss_dssp CHHHHHHH
T ss_pred ccHHHHHH
Confidence 87654444
No 410
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=35.12 E-value=2.5e+02 Score=25.30 Aligned_cols=140 Identities=14% Similarity=0.064 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEecCCCH----------HH-HHHHHHHHHh----cCCCccEEEEEEecCCCCCCC
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLLAFETIPNK----------LE-AQALVELLEE----ENIQIPSWICFSSVDGENAPS 218 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~----------~E-~~a~~~~~~~----~~~~~pv~is~~~~~~~~l~~ 218 (328)
+.++++..-++.++.+.+.||- .+|...++ .+ ++++++++++ .+....+++++. .
T Consensus 72 t~ed~~~~a~~~~~~~~~dgV~--y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~-R------- 141 (326)
T 3pao_A 72 TEQDFYDLTWAYLQKCKAQNVV--HVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFL-R------- 141 (326)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEE--EECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEE-T-------
T ss_pred CHHHHHHHHHHHHHHHHHcCCe--EEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeC-C-------
Confidence 6788888888888888888874 45655533 22 4455555553 343445566663 1
Q ss_pred CCCHHHHHHHHH---h-cCCceEEEECCC----ChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhH
Q 020275 219 GESFKECLDIIN---K-SGKVNAVGINCA----PPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGK 290 (328)
Q Consensus 219 G~~~~~~~~~~~---~-~~~~~~iGvNC~----~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~ 290 (328)
..+.+++.+.++ + ...+.+|++-|. +|+....+++..++. +.++-+. +|+. .+++
T Consensus 142 ~~~~~~a~~~~~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~-gl~~~~H--agE~-------------~~~~- 204 (326)
T 3pao_A 142 HLSEEQAQKTLDQALPFRDAFIAVGLDSSEVGHPPSKFQRVFDRARSE-GFLTVAH--AGEE-------------GPPE- 204 (326)
T ss_dssp TSCHHHHHHHHHHHGGGGGGCSEEEEESCCTTCCGGGGHHHHHHHHHT-TCEECEE--ESSS-------------SCHH-
T ss_pred CCCHHHHHHHHHHHhhccccceeeCCCCCCCCCCHHHHHHHHHHHHHc-CCceeee--cCCC-------------CCHH-
Confidence 123344433332 1 125778999874 367777777766553 4454333 3321 0232
Q ss_pred HHHHHHHHHH-cCCeEEeecCCCC--hHHHHHHHHH
Q 020275 291 FESFATRWRD-SGAKLIGGCCRTT--PSTIQAVSKV 323 (328)
Q Consensus 291 ~~~~~~~~~~-~G~~iiGGCCGt~--P~hI~al~~~ 323 (328)
.+.+.++ .|+.-||=|+..+ |+.|+.|++.
T Consensus 205 ---~i~~al~~lg~~rigHgv~l~~d~~l~~~l~~~ 237 (326)
T 3pao_A 205 ---YIWEALDLLKVERIDHGVRAFEDERLMRRLIDE 237 (326)
T ss_dssp ---HHHHHHHTTCCSSEEECGGGGGCHHHHHHHHHH
T ss_pred ---HHHHHHhcCCCceeeeeeeecccHHHHHHHHHc
Confidence 2334443 6887788887776 7788888764
No 411
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=35.10 E-value=2.6e+02 Score=25.45 Aligned_cols=138 Identities=12% Similarity=-0.047 Sum_probs=75.0
Q ss_pred HHHHHHHHhcCCCeEEEecC-------CCHHHHHHHHHHHHh-cCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhc--
Q 020275 163 RRRLQVLVESGPDLLAFETI-------PNKLEAQALVELLEE-ENIQIPSWICFSSVDGENAPSGESFKECLDIINKS-- 232 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-------~~~~E~~a~~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~-- 232 (328)
.++++.+.+.|.|.|=+=.- +++.+...+++++++ .+.+.++.+-. ..|-+++++++.++..
T Consensus 154 ~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDa--------n~~~~~~~a~~~~~~l~~ 225 (382)
T 1rvk_A 154 GRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDA--------FHWYSRTDALALGRGLEK 225 (382)
T ss_dssp HHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEEC--------CTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEEC--------CCCCCHHHHHHHHHHHHh
Confidence 44555566678887744322 267777888888887 45456666533 1456778887665432
Q ss_pred CCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccC-Cc-cccccCCCC-----C------ChhHHHHHHHHHH
Q 020275 233 GKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWD-GR-AKKWLPSKC-----L------GDGKFESFATRWR 299 (328)
Q Consensus 233 ~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d-~~-~~~~~~~~~-----~------~~~~~~~~~~~~~ 299 (328)
.++..|==-| .++. ...++.+++.++.|+++==+ .++ .. ...++.... + ...++.+.+....
T Consensus 226 ~~i~~iE~P~-~~~~-~~~~~~l~~~~~iPIa~dE~---~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~ 300 (382)
T 1rvk_A 226 LGFDWIEEPM-DEQS-LSSYKWLSDNLDIPVVGPES---AAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAE 300 (382)
T ss_dssp TTCSEEECCS-CTTC-HHHHHHHHHHCSSCEEECSS---CSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred cCCCEEeCCC-Chhh-HHHHHHHHhhCCCCEEEeCC---ccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHH
Confidence 3444433222 2333 35566777777788876221 111 10 000110100 0 2334555566667
Q ss_pred HcCCeEEeecCCCC
Q 020275 300 DSGAKLIGGCCRTT 313 (328)
Q Consensus 300 ~~G~~iiGGCCGt~ 313 (328)
..|+.+.-||++++
T Consensus 301 ~~g~~~~~~~~~~~ 314 (382)
T 1rvk_A 301 AFGMECEVHGNTAM 314 (382)
T ss_dssp HTTCCEEECCCSHH
T ss_pred HcCCeEeecCCCCH
Confidence 88998888866555
No 412
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=35.02 E-value=1e+02 Score=27.18 Aligned_cols=28 Identities=7% Similarity=0.222 Sum_probs=25.4
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEe
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFE 180 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~E 180 (328)
-+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 49 ~~~~~i~~~~~~~~~~L~~~g~~~iVIA 76 (268)
T 3out_A 49 KSRATIQKFAAQTAKFLIDQEVKAIIIA 76 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 3889999999999999999999999875
No 413
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=34.95 E-value=2.1e+02 Score=26.02 Aligned_cols=57 Identities=18% Similarity=0.290 Sum_probs=32.3
Q ss_pred CccEEEEEEecCCCCCCCCCCHHHHHHH---HHh--cCCceEEEECCCCh------------hhhHHHHHHHHhhcCCeE
Q 020275 201 QIPSWICFSSVDGENAPSGESFKECLDI---INK--SGKVNAVGINCAPP------------QFVENLICYFKELTKKAI 263 (328)
Q Consensus 201 ~~pv~is~~~~~~~~l~~G~~~~~~~~~---~~~--~~~~~~iGvNC~~p------------~~~~~~l~~l~~~~~~pl 263 (328)
.+|+++++ .|.++++.++. +.+ ...+++|=+|+++| +.+..+++.+++....|+
T Consensus 126 ~~pvivsi---------~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv 196 (354)
T 3tjx_A 126 KKPLFLSM---------SGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp TCCEEEEE---------CCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHCCSCE
T ss_pred CceEEEEE---------ecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhccc
Confidence 68999998 35555544332 211 12456677777644 334556666677677776
Q ss_pred EEE
Q 020275 264 VVY 266 (328)
Q Consensus 264 ~~y 266 (328)
.++
T Consensus 197 ~vK 199 (354)
T 3tjx_A 197 GVK 199 (354)
T ss_dssp EEE
T ss_pred ccc
Confidence 654
No 414
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=34.93 E-value=81 Score=27.00 Aligned_cols=87 Identities=10% Similarity=0.099 Sum_probs=47.4
Q ss_pred HHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 165 RLQVLVESGPDLLAFETI--PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
.++.+.+.|+|.+.+=-- +. ++....++.+++.+ +.+.+++.. .++. +.+..+.+ +++.|++-+
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g--~~~gv~~~p--------~t~~-e~~~~~~~--~~D~v~~ms 142 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELG--KKAGAVLNP--------STPL-DFLEYVLP--VCDLILIMS 142 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTT--CEEEEEECT--------TCCG-GGGTTTGG--GCSEEEEES
T ss_pred HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcC--CcEEEEEeC--------CCcH-HHHHHHHh--cCCEEEEEE
Confidence 456777899999944322 22 34566777777765 666666632 2222 23333322 344554444
Q ss_pred CC--------hhhhHHHHHHHHhhc-----CCeEEE
Q 020275 243 AP--------PQFVENLICYFKELT-----KKAIVV 265 (328)
Q Consensus 243 ~~--------p~~~~~~l~~l~~~~-----~~pl~~ 265 (328)
+. +......++++++.. +.|+.+
T Consensus 143 v~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v 178 (230)
T 1tqj_A 143 VNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEV 178 (230)
T ss_dssp SCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEE
T ss_pred eccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 32 234556667776655 456544
No 415
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=34.72 E-value=2.6e+02 Score=25.25 Aligned_cols=175 Identities=14% Similarity=0.108 Sum_probs=87.4
Q ss_pred hcCCChHHHHHHHHHHHH-hccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCce
Q 020275 48 YLIKQPHLVKRVHLEYLE-AGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRA 126 (328)
Q Consensus 48 ~ll~~Pe~V~~iH~~yl~-AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~ 126 (328)
.++..++.++++=++|++ +-+|=++.-=-+.+|......|++.+++-+.+..+++ ++.+++ +-.+
T Consensus 68 ~vl~t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~---~a~~~~-----------gi~~ 133 (326)
T 3pao_A 68 DVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALR---DGEKLL-----------GIRH 133 (326)
T ss_dssp GGCCSHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHH---HHHHHH-----------CCEE
T ss_pred HHhCCHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHH---HHHhhC-----------ceEE
Confidence 456678877777776664 3333222222234576666778886544443334443 343333 1111
Q ss_pred -EEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh--cCCCeEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 020275 127 -LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVE--SGPDLLAFETIPNKLEAQALVELLEEENIQIP 203 (328)
Q Consensus 127 -~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~--~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~p 203 (328)
+|.-.+- ..+.++..+..+..++ +.+ .|+|+.--|.-..+.+.+.+.+.+++.+ +|
T Consensus 134 ~lI~~~~R------------------~~~~~~a~~~~~~a~~-~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~g--l~ 192 (326)
T 3pao_A 134 GLILSFLR------------------HLSEEQAQKTLDQALP-FRDAFIAVGLDSSEVGHPPSKFQRVFDRARSEG--FL 192 (326)
T ss_dssp CCEEEEET------------------TSCHHHHHHHHHHHGG-GGGGCSEEEEESCCTTCCGGGGHHHHHHHHHTT--CE
T ss_pred EEEEEeCC------------------CCCHHHHHHHHHHHhh-ccccceeeCCCCCCCCCCHHHHHHHHHHHHHcC--Cc
Confidence 2222111 1233444333332221 222 3567777787777888888999888875 66
Q ss_pred EEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEeCC
Q 020275 204 SWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYPNS 269 (328)
Q Consensus 204 v~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ypN~ 269 (328)
+. +-+.+.+ +-..+.+++..+. ..-.+-|+.+.. | ..++.+++. +.++.+-|-+
T Consensus 193 ~~--~HagE~~---~~~~i~~al~~lg--~~rigHgv~l~~d~----~l~~~l~~~-~i~le~cP~S 247 (326)
T 3pao_A 193 TV--AHAGEEG---PPEYIWEALDLLK--VERIDHGVRAFEDE----RLMRRLIDE-QIPLTVCPLS 247 (326)
T ss_dssp EC--EEESSSS---CHHHHHHHHHTTC--CSSEEECGGGGGCH----HHHHHHHHH-TCCEEECHHH
T ss_pred ee--eecCCCC---CHHHHHHHHhcCC--CceeeeeeeecccH----HHHHHHHHc-CCeEEECchh
Confidence 54 4442221 1122333333221 233566666663 3 344444432 5677777743
No 416
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=34.60 E-value=48 Score=30.69 Aligned_cols=28 Identities=14% Similarity=0.076 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhccceeecCCcCCChh
Q 020275 54 HLVKRVHLEYLEAGADILVTSSYQATIP 81 (328)
Q Consensus 54 e~V~~iH~~yl~AGAdiI~TnTy~as~~ 81 (328)
|...+.|.+.-+-|+-+|+|---..++.
T Consensus 36 ~~~~~~y~~rA~gG~Glii~e~~~v~~~ 63 (363)
T 3l5l_A 36 DWHHVHLAGLARGGAGLLVVEATAVAPE 63 (363)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEESSGG
T ss_pred HHHHHHHHHHHccCceEEEecceeeCcc
Confidence 5566777777777888777644344443
No 417
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=34.59 E-value=98 Score=27.35 Aligned_cols=87 Identities=13% Similarity=0.177 Sum_probs=54.1
Q ss_pred CHHHHHHHHHhcCCceEEEECCCC----hhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHH
Q 020275 221 SFKECLDIINKSGKVNAVGINCAP----PQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFAT 296 (328)
Q Consensus 221 ~~~~~~~~~~~~~~~~~iGvNC~~----p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~ 296 (328)
+.+.|++++++ .+...+=+==.. -+.+..+.+.-.+ .-+.+-|-+| ++.+.|.+.++
T Consensus 169 ~vetAiaml~d-mG~~SvKffPM~Gl~~leEl~avAkAca~---~g~~lEPTGG---------------Idl~Nf~~I~~ 229 (275)
T 3m6y_A 169 PIKTAIALVRD-MGGNSLKYFPMKGLAHEEEYRAVAKACAE---EGFALEPTGG---------------IDKENFETIVR 229 (275)
T ss_dssp EHHHHHHHHHH-HTCCEEEECCCTTTTTHHHHHHHHHHHHH---HTCEEEEBSS---------------CCTTTHHHHHH
T ss_pred eHHHHHHHHHH-cCCCeeeEeecCCcccHHHHHHHHHHHHH---cCceECCCCC---------------ccHhHHHHHHH
Confidence 57778887765 344444333221 2222222222222 2226666655 45778999999
Q ss_pred HHHHcCC---------eEE-eecCCCChHHHHHHHHHHhc
Q 020275 297 RWRDSGA---------KLI-GGCCRTTPSTIQAVSKVLKE 326 (328)
Q Consensus 297 ~~~~~G~---------~ii-GGCCGt~P~hI~al~~~l~~ 326 (328)
-.+++|+ +|| -..-.|.|++++.|-..++.
T Consensus 230 i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~ 269 (275)
T 3m6y_A 230 IALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKK 269 (275)
T ss_dssp HHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHH
Confidence 9999997 445 67788999999998777653
No 418
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=34.46 E-value=3.2e+02 Score=26.30 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=42.4
Q ss_pred HHHHHHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGI 240 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGv 240 (328)
.++++.|+++|+|.|.+-+- ++...+...++.+++.-.++|+++.- + .+.+++...++. ++++|-+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~-v---------~t~e~a~~~~~a--Gad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN-V---------ATAEATKALIEA--GANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEE-E---------CSHHHHHHHHHH--TCSEEEE
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeee-e---------ccHHHHHHHHHh--CCCEEEE
Confidence 56789999999999998643 34455555666666653257888632 1 245666555543 5777755
No 419
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=34.37 E-value=2.8e+02 Score=25.48 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=17.4
Q ss_pred HHHHHHHHhcCCCeEEEecCCC
Q 020275 163 RRRLQVLVESGPDLLAFETIPN 184 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~ 184 (328)
.+.+..|.+.++|.|.+|+-.+
T Consensus 249 ~~i~~~l~~~~~D~i~lE~~~~ 270 (357)
T 3rpd_A 249 EEVFPKLQKSNIDIISLECHNS 270 (357)
T ss_dssp GGTHHHHHHSSCCEEEECCTTC
T ss_pred HHHHHHHHhCCCCEEEEEecCC
Confidence 4467777889999999997654
No 420
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=34.31 E-value=2.3e+02 Score=26.05 Aligned_cols=107 Identities=7% Similarity=-0.024 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEecC----------C-----------CH-HH---HHHHHHHHHhc-CCCccEEEEE
Q 020275 155 LEKLKDFHRRRLQVLVESGPDLLAFETI----------P-----------NK-LE---AQALVELLEEE-NIQIPSWICF 208 (328)
Q Consensus 155 ~~e~~~~h~~qi~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~~~~~~-~~~~pv~is~ 208 (328)
.+++.+.|.+-++...++|.|.|=+=-- | ++ .. +..+++++++. +.+ |+.|-+
T Consensus 156 I~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~-~v~vRl 234 (361)
T 3gka_A 156 IPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAA-RVGVHL 234 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGG-GEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCC-eEEEec
Confidence 4666677777777788899999844321 1 11 12 23455555553 433 999988
Q ss_pred EecCCC-CCCCCCCHHHHH---HHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEE
Q 020275 209 SSVDGE-NAPSGESFKECL---DIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 209 ~~~~~~-~l~~G~~~~~~~---~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
+..+.. -+.++.+.++++ ..+.+ .+++.|-+-..... ..+++.+++..+.|+++
T Consensus 235 s~~~~~~g~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~--~~~~~~ik~~~~iPvi~ 292 (361)
T 3gka_A 235 APRGDAHTMGDSDPAATFGHVARELGR-RRIAFLFARESFGG--DAIGQQLKAAFGGPFIV 292 (361)
T ss_dssp CTTCCSSSCCCSCHHHHHHHHHHHHHH-TTCSEEEEECCCST--TCCHHHHHHHHCSCEEE
T ss_pred ccccccCCCCCCCcHHHHHHHHHHHHH-cCCCEEEECCCCCC--HHHHHHHHHHcCCCEEE
Confidence 764321 122344455544 44443 46777666543200 13456666667788765
No 421
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=34.29 E-value=2.8e+02 Score=25.53 Aligned_cols=116 Identities=15% Similarity=0.172 Sum_probs=70.2
Q ss_pred HHHHHHHHhcCCCeEEEe-----c--------C-----------------CCHHHHHHHHHHHHhcCCCccEEEEEEecC
Q 020275 163 RRRLQVLVESGPDLLAFE-----T--------I-----------------PNKLEAQALVELLEEENIQIPSWICFSSVD 212 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~E-----T--------~-----------------~~~~E~~a~~~~~~~~~~~~pv~is~~~~~ 212 (328)
++.++...++|+|++=|- | + -..++.+.+.+++++.+ ++++.+..
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~G--i~~~st~~--- 112 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKG--MIFISTLF--- 112 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTT--CEEEEEEC---
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhC--CeEEEeeC---
Confidence 667888888999999765 2 1 13456677778888775 88887663
Q ss_pred CCCCCCCCCHHHHHHHHHhcCCceEEEE---CCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChh
Q 020275 213 GENAPSGESFKECLDIINKSGKVNAVGI---NCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDG 289 (328)
Q Consensus 213 ~~~l~~G~~~~~~~~~~~~~~~~~~iGv---NC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~ 289 (328)
| .+.++.+.+ .+++++=| |+.. .++|+.+.+ +++|+++.- ...+.+
T Consensus 113 -----d----~~svd~l~~-~~v~~~KI~S~~~~n----~~LL~~va~-~gkPviLst----------------Gmat~~ 161 (349)
T 2wqp_A 113 -----S----RAAALRLQR-MDIPAYKIGSGECNN----YPLIKLVAS-FGKPIILST----------------GMNSIE 161 (349)
T ss_dssp -----S----HHHHHHHHH-HTCSCEEECGGGTTC----HHHHHHHHT-TCSCEEEEC----------------TTCCHH
T ss_pred -----C----HHHHHHHHh-cCCCEEEECcccccC----HHHHHHHHh-cCCeEEEEC----------------CCCCHH
Confidence 2 345555544 23444444 3333 356777665 478887721 112577
Q ss_pred HHHHHHHHHHHcCCeEEe-ecCCCCh
Q 020275 290 KFESFATRWRDSGAKLIG-GCCRTTP 314 (328)
Q Consensus 290 ~~~~~~~~~~~~G~~iiG-GCCGt~P 314 (328)
+|...+.-....|.+|+= =|-.+-|
T Consensus 162 Ei~~Ave~i~~~G~~iiLlhc~s~Yp 187 (349)
T 2wqp_A 162 SIKKSVEIIREAGVPYALLHCTNIYP 187 (349)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCSS
T ss_pred HHHHHHHHHHHcCCCEEEEeccCCCC
Confidence 787777766777743322 2555544
No 422
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=34.28 E-value=1.3e+02 Score=25.94 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHH----HHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLE----AQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDI 228 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E----~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 228 (328)
++.+++.+.|++ + ....|++++|+-..+.+ -....+.++.. +.||++-.... .| ++.+++..
T Consensus 116 i~~~~I~~~~~~----l-~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l--~~pVILV~~~~------lg-~i~~~~lt 181 (242)
T 3qxc_A 116 IDTDNLTQRLHN----F-TKTYDLVIVEGAGGLCVPITLEENMLDFALKL--KAKMLLISHDN------LG-LINDCLLN 181 (242)
T ss_dssp CCHHHHHHHHHH----G-GGTCSEEEEECCSCTTCBSSSSCBHHHHHHHH--TCEEEEEECCS------TT-HHHHHHHH
T ss_pred CCHHHHHHHHHH----H-HhcCCEEEEECCCCccccccccchHHHHHHHc--CCCEEEEEcCC------Cc-HHHHHHHH
Confidence 466777666554 2 35799999998654432 12334566666 48988766432 13 45555433
Q ss_pred H---Hh-cCCceEEEECCCChh
Q 020275 229 I---NK-SGKVNAVGINCAPPQ 246 (328)
Q Consensus 229 ~---~~-~~~~~~iGvNC~~p~ 246 (328)
+ .+ ... .++-+|+..++
T Consensus 182 ~~~l~~~g~~-~GvIlN~v~~~ 202 (242)
T 3qxc_A 182 DFLLKSHQLD-YKIAINLKGNN 202 (242)
T ss_dssp HHHHHTSSSC-EEEEECCCTTC
T ss_pred HHHHHhCCCC-EEEEEeCCCCc
Confidence 3 22 235 78889998643
No 423
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=34.26 E-value=1.9e+02 Score=28.51 Aligned_cols=47 Identities=17% Similarity=0.309 Sum_probs=32.8
Q ss_pred HHHHHHHHhcCCCeEEEecCC-CHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIP-NKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~-~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
.+++++|+++|||+|.+.|-. +-.-..-.++.+++...++|++..=.
T Consensus 283 ~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNV 330 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNV 330 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccc
Confidence 679999999999999998642 22334445566666544688876543
No 424
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=34.11 E-value=2.5e+02 Score=24.95 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=52.8
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecC------CCCCCCCCCHH---HHHHHHH--hcCC
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVD------GENAPSGESFK---ECLDIIN--KSGK 234 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~------~~~l~~G~~~~---~~~~~~~--~~~~ 234 (328)
+..|.+.|++.+-+|--... ...++.+.+.+ .|++--+-+.. ++...-|.+-+ ++++... +..+
T Consensus 112 a~rl~kaGa~aVklEdg~~~---~~~i~~l~~~G--Ipv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAG 186 (275)
T 3vav_A 112 AVKLMRAGAQMVKFEGGEWL---AETVRFLVERA--VPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAG 186 (275)
T ss_dssp HHHHHHTTCSEEEEECCGGG---HHHHHHHHHTT--CCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECCchhH---HHHHHHHHHCC--CCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcC
Confidence 34455579999999976433 33455555554 88886554322 12223454433 3332221 1248
Q ss_pred ceEEEECCCChhhhHHHHHHHHhhcCCeEEEE
Q 020275 235 VNAVGINCAPPQFVENLICYFKELTKKAIVVY 266 (328)
Q Consensus 235 ~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~y 266 (328)
+++|=+-|...+ +++++.+..+.|++--
T Consensus 187 A~~ivlE~vp~~----~a~~It~~l~iP~igI 214 (275)
T 3vav_A 187 AQLIVLEAVPTL----VAAEVTRELSIPTIGI 214 (275)
T ss_dssp CSEEEEESCCHH----HHHHHHHHCSSCEEEE
T ss_pred CCEEEecCCCHH----HHHHHHHhCCCCEEEE
Confidence 899999999532 5566666677887653
No 425
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=34.09 E-value=2.7e+02 Score=25.34 Aligned_cols=111 Identities=13% Similarity=0.176 Sum_probs=67.0
Q ss_pred CCCHHHH---HHHHHHHHHHHHhcCCCeEEEec----------CC-----------CH-HHH---HHHHHHHHhc-CCCc
Q 020275 152 GVDLEKL---KDFHRRRLQVLVESGPDLLAFET----------IP-----------NK-LEA---QALVELLEEE-NIQI 202 (328)
Q Consensus 152 ~~~~~e~---~~~h~~qi~~l~~~gvD~i~~ET----------~~-----------~~-~E~---~a~~~~~~~~-~~~~ 202 (328)
.++.+|+ .+.|.+-++...++|.|.|=+=- -| ++ ..+ ..+++++++. +.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 4666555 45566666667789999985441 01 11 223 3456666653 4467
Q ss_pred cEEEEEEecCCCCCCCCCCHHHHHHHHHh--cCCceEEEECCC---------ChhhhHHHHHHHHhhcCCeEEE
Q 020275 203 PSWICFSSVDGENAPSGESFKECLDIINK--SGKVNAVGINCA---------PPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 203 pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~~iGvNC~---------~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
|++|-++..+ ...+|.++++++..+.. .. ++.|=+... .|..-..+++.+++..+.|+++
T Consensus 212 pv~vRls~~~--~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~ 282 (343)
T 3kru_A 212 PIFVRVSADD--YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSA 282 (343)
T ss_dssp CEEEEEECCC--SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEE
T ss_pred CeEEEeechh--hhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccce
Confidence 9999888643 23457788877665533 23 676666321 1333456778888877888765
No 426
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=34.07 E-value=1.2e+02 Score=26.91 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecC
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETI 182 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~ 182 (328)
-+.+++.++-.+.++.|.+.|+|+|++=..
T Consensus 66 ~s~~~i~~~~~~~~~~L~~~g~d~IVIACN 95 (290)
T 2vvt_A 66 RPAEQVVQFTWEMADFLLKKRIKMLVIACN 95 (290)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCc
Confidence 378999999999999999999999987643
No 427
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=33.91 E-value=2.9e+02 Score=25.55 Aligned_cols=128 Identities=21% Similarity=0.330 Sum_probs=72.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020275 87 GLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRL 166 (328)
Q Consensus 87 g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi 166 (328)
|++-....||++.++.-|+.. + ...|+-.+|- +-|.+ ++..+.+++...|++|+
T Consensus 90 GLDW~~a~ELIrRs~aeA~~~--------------p--g~~ia~G~GT--DqL~~--------~~~~~l~~V~~AY~EQ~ 143 (396)
T 4dnh_A 90 GLGWPEARELIRRSLAEARGR--------------P--DALIACGAGT--DHLAP--------GPDVSIDDILAAYESQI 143 (396)
T ss_dssp TBCHHHHHHHHHHHHHHHHTS--------------S--SCCEEEEECC--TTSCC--------CTTCCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhcC--------------C--CCeeeeccCc--CCCCC--------CCCCCHHHHHHHHHHHH
Confidence 555566788888777666521 1 2335544553 11221 12248999999999999
Q ss_pred HHHHhcCCCeEEEecCCCHHHHHHH----------HHHHHhcCCCccEEEEEEecC-CCCCC--CC-CCHHHHH----HH
Q 020275 167 QVLVESGPDLLAFETIPNKLEAQAL----------VELLEEENIQIPSWICFSSVD-GENAP--SG-ESFKECL----DI 228 (328)
Q Consensus 167 ~~l~~~gvD~i~~ET~~~~~E~~a~----------~~~~~~~~~~~pv~is~~~~~-~~~l~--~G-~~~~~~~----~~ 228 (328)
+...+.|.-+|+ |-|-.=++++ -+++++. +.||++-.-=+. |..|. -| .++.++. +.
T Consensus 144 ~~Ve~~G~~~IL---MASRaLA~~A~~pdDY~~VY~~vL~q~--~~PVILHWLG~mFDPaL~GYWGs~d~~~A~~t~l~l 218 (396)
T 4dnh_A 144 EAIEAEGGRIIL---MASRALAAAAKGPEDYIRVYDRVLSQV--KEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCLDV 218 (396)
T ss_dssp HHHHHTTCCEEE---CCCHHHHHHCCSHHHHHHHHHHHHHHC--SSCEEEEEECTTTCGGGTTTTSCSSHHHHHHHHHHH
T ss_pred HHHHHcCCeEEE---ehhHHHHHHhCCHHHHHHHHHHHHHhc--CCCEEEEecccccChhhccccCCCCHHHHHHHHHHH
Confidence 999999999998 5554333322 1333333 589988764111 11111 22 3455444 33
Q ss_pred HHh-cCCceEEEECCCCh
Q 020275 229 INK-SGKVNAVGINCAPP 245 (328)
Q Consensus 229 ~~~-~~~~~~iGvNC~~p 245 (328)
|.+ ...+++|=|.=-..
T Consensus 219 I~~~~~kVDGIKiSLLDa 236 (396)
T 4dnh_A 219 LEAHAAKVDGIKISLLSK 236 (396)
T ss_dssp HHHTGGGEEEEEEESCCH
T ss_pred HHhChhhcCceEEeeecc
Confidence 432 23567766655443
No 428
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=33.90 E-value=2.3e+02 Score=24.45 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=15.1
Q ss_pred HHHHHHHHHhcCCCeEEEe
Q 020275 162 HRRRLQVLVESGPDLLAFE 180 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~E 180 (328)
+.++++.++++||++|-+=
T Consensus 45 ~~~~~~~al~~Gv~~vqlR 63 (243)
T 3o63_A 45 LAQFAEAALAGGVDIIQLR 63 (243)
T ss_dssp HHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEc
Confidence 4667888888999999773
No 429
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=33.89 E-value=1.6e+02 Score=25.23 Aligned_cols=39 Identities=18% Similarity=0.352 Sum_probs=26.8
Q ss_pred HHHHHhcCCCeEEE--ecCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 166 LQVLVESGPDLLAF--ETIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 166 i~~l~~~gvD~i~~--ET~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
++.+.++|+|++.+ |+..+ +...++.+++.+ ..+.+++.
T Consensus 80 i~~~~~aGad~itvH~Ea~~~---~~~~i~~i~~~G--~k~gval~ 120 (228)
T 3ovp_A 80 VKPMAVAGANQYTFHLEATEN---PGALIKDIRENG--MKVGLAIK 120 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGCSC---HHHHHHHHHHTT--CEEEEEEC
T ss_pred HHHHHHcCCCEEEEccCCchh---HHHHHHHHHHcC--CCEEEEEc
Confidence 56677899999766 65554 455677777775 66777763
No 430
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=33.73 E-value=96 Score=28.16 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=19.7
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHH
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQA 190 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a 190 (328)
.++.+.+.|+|.|-++...++.|++.
T Consensus 255 ~l~~l~~~g~d~i~~d~~~dl~~~~~ 280 (354)
T 3cyv_A 255 WLEAMAETGCDALGLDWTTDIADARR 280 (354)
T ss_dssp THHHHHTTSCSEEECCTTSCHHHHHH
T ss_pred HHHHHHhcCCCEEEeCCCCCHHHHHH
Confidence 34556688999999997778877543
No 431
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=33.40 E-value=2.7e+02 Score=25.01 Aligned_cols=25 Identities=20% Similarity=0.298 Sum_probs=15.3
Q ss_pred HHHHHHcCCeEEeecCCCChHHHHHHH
Q 020275 295 ATRWRDSGAKLIGGCCRTTPSTIQAVS 321 (328)
Q Consensus 295 ~~~~~~~G~~iiGGCCGt~P~hI~al~ 321 (328)
++.+.+.|..++.++ +++++.+.+.
T Consensus 117 ~~~l~~~g~~v~~~v--~s~~~a~~a~ 141 (326)
T 3bo9_A 117 IRELKENGTKVIPVV--ASDSLARMVE 141 (326)
T ss_dssp HHHHHHTTCEEEEEE--SSHHHHHHHH
T ss_pred HHHHHHcCCcEEEEc--CCHHHHHHHH
Confidence 334445688777665 5677766554
No 432
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=33.34 E-value=1.8e+02 Score=27.03 Aligned_cols=41 Identities=20% Similarity=0.206 Sum_probs=28.2
Q ss_pred HHHHHHHhcCCceEEEECCCC--hhhhHHHHHHHHhhc-CCeEEE
Q 020275 224 ECLDIINKSGKVNAVGINCAP--PQFVENLICYFKELT-KKAIVV 265 (328)
Q Consensus 224 ~~~~~~~~~~~~~~iGvNC~~--p~~~~~~l~~l~~~~-~~pl~~ 265 (328)
+.+..+.+ .++++|-+|+++ |......++.+++.. +.|+++
T Consensus 156 ~~a~~~~~-~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv 199 (404)
T 1eep_A 156 ERVEELVK-AHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIA 199 (404)
T ss_dssp HHHHHHHH-TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHH-CCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEE
Confidence 33433433 478889888863 666777888888877 678776
No 433
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=33.18 E-value=2.8e+02 Score=25.22 Aligned_cols=173 Identities=13% Similarity=0.140 Sum_probs=86.3
Q ss_pred hcCCChHHHHHHHHHHHH-hccceeecCCcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCce
Q 020275 48 YLIKQPHLVKRVHLEYLE-AGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRA 126 (328)
Q Consensus 48 ~ll~~Pe~V~~iH~~yl~-AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~ 126 (328)
.++..++.++++-++|++ +-+|=|+--=.+.+|......|++.+++-+.+..+++ ++..++ +-.+
T Consensus 71 ~vl~~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~---~a~~~~-----------gi~~ 136 (343)
T 3rys_A 71 AVLQTEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALA---TSEEDF-----------GVST 136 (343)
T ss_dssp GGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHT---THHHHH-----------SCEE
T ss_pred HHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHH---HHhhcC-----------ceeE
Confidence 356788888887777774 2233222111233566666778986544443334443 333333 1112
Q ss_pred EEEeecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh---cCCCeEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 020275 127 LVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVE---SGPDLLAFETIPNKLEAQALVELLEEENIQIP 203 (328)
Q Consensus 127 ~VaGsiGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~---~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~p 203 (328)
.+..|+- +..+.++..+..+..++ + . .|+|+.--|.-....+.+.+.+.+++.+ +|
T Consensus 137 ~lI~~~~-----------------R~~~~~~a~~~l~~a~~-~-~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~g--l~ 195 (343)
T 3rys_A 137 LLIAAFL-----------------RDMSEDSALEVLDQLLA-M-HAPIAGIGLDSAEVGNPPSKFERLYQRAAEAG--LR 195 (343)
T ss_dssp EEEEEEE-----------------TTSCHHHHHHHHHHHHH-T-TCCCCEEEEESCCTTCCGGGGHHHHHHHHHTT--CE
T ss_pred EEEEEeC-----------------CCCCHHHHHHHHHHHHh-C-CCCEEEEecCCcccCCCHHHHHHHHHHHHHCC--Ce
Confidence 2222220 01244444444333332 2 2 2457777787777788888999888875 77
Q ss_pred EEEEEEecCCCCCCCCCCHHHHHHHHHh-cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEEEeC
Q 020275 204 SWICFSSVDGENAPSGESFKECLDIINK-SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVVYPN 268 (328)
Q Consensus 204 v~is~~~~~~~~l~~G~~~~~~~~~~~~-~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ypN 268 (328)
+. +.+.+.+ +.....+.+.. ...-.+-|+.+.. | .+++.+++. +.++.+-|-
T Consensus 196 ~~--~HagE~~------~~~~i~~al~~lg~~rIgHgv~l~~d~----~l~~~l~~~-~i~le~cP~ 249 (343)
T 3rys_A 196 RI--AHAGEEG------PASYITEALDVLHVERIDHGIRCMEDT----DVVQRLVAE-QVPLTVCPL 249 (343)
T ss_dssp EE--EEESSSS------CHHHHHHHHHTSCCSEEEECGGGGGCH----HHHHHHHHH-TCCEEECHH
T ss_pred EE--EeeCCCC------CHHHHHHHHhcCCcceeeeeeeecCCh----HHHHHHHhc-CCCeeEchh
Confidence 54 4443221 12333333321 1223455555553 3 344444432 466666664
No 434
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=32.83 E-value=13 Score=23.95 Aligned_cols=17 Identities=18% Similarity=0.473 Sum_probs=14.3
Q ss_pred CCChHHHHHHHHHHHHh
Q 020275 50 IKQPHLVKRVHLEYLEA 66 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~A 66 (328)
-++++-|.++|+.|+.+
T Consensus 23 knD~~Fl~~iHeAYl~s 39 (46)
T 2wx4_A 23 QNDKEFANKLHKAYLNG 39 (46)
T ss_dssp HHCTTHHHHHHHHHHC-
T ss_pred HcCHHHHHHHHHHHHHH
Confidence 47889999999999975
No 435
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=32.72 E-value=1.4e+02 Score=21.76 Aligned_cols=77 Identities=12% Similarity=0.115 Sum_probs=40.2
Q ss_pred HHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhh
Q 020275 169 LVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQF 247 (328)
Q Consensus 169 l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~ 247 (328)
+.+..+|+++++.. |.. ....+++.+++.....|+++ ++ +-.+.......+.. ++..+-.-=..++.
T Consensus 47 l~~~~~dlvi~d~~l~~~-~g~~~~~~l~~~~~~~~ii~-~s--------~~~~~~~~~~~~~~--g~~~~l~kP~~~~~ 114 (137)
T 3hdg_A 47 FGLHAPDVIITDIRMPKL-GGLEMLDRIKAGGAKPYVIV-IS--------AFSEMKYFIKAIEL--GVHLFLPKPIEPGR 114 (137)
T ss_dssp HHHHCCSEEEECSSCSSS-CHHHHHHHHHHTTCCCEEEE-CC--------CCCCHHHHHHHHHH--CCSEECCSSCCHHH
T ss_pred HhccCCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCcEEE-Ee--------cCcChHHHHHHHhC--CcceeEcCCCCHHH
Confidence 34457899999854 443 33445566666544566543 22 11223344444432 45555444345666
Q ss_pred hHHHHHHHHh
Q 020275 248 VENLICYFKE 257 (328)
Q Consensus 248 ~~~~l~~l~~ 257 (328)
+...++.+.+
T Consensus 115 l~~~i~~~~~ 124 (137)
T 3hdg_A 115 LMETLEDFRH 124 (137)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666543
No 436
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=32.70 E-value=2.2e+02 Score=25.56 Aligned_cols=18 Identities=17% Similarity=0.370 Sum_probs=13.2
Q ss_pred HHHHHHHHhcCCCeEEEe
Q 020275 163 RRRLQVLVESGPDLLAFE 180 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~E 180 (328)
.++++++.+.|+|+|.+|
T Consensus 173 ~eeA~amA~agpDiI~~h 190 (286)
T 2p10_A 173 PEDAVAMAKAGADILVCH 190 (286)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 346677777888888777
No 437
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=32.67 E-value=2.7e+02 Score=24.89 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHhccceeecC-CcCCChhhHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEee
Q 020275 53 PHLVKRVHLEYLEAGADILVTS-SYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAAS 131 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaGs 131 (328)
.+.+++.-+.++++|++-|..+ |-+ -.. -++.+|-.++.+.+++.+ .++-..|+|
T Consensus 27 ~~~l~~lv~~li~~Gv~Gl~v~GtTG-E~~-----~Ls~~Er~~v~~~~~~~~-----------------~grvpViaG- 82 (311)
T 3h5d_A 27 FDAIPALIEHLLAHHTDGILLAGTTA-ESP-----TLTHDEELELFAAVQKVV-----------------NGRVPLIAG- 82 (311)
T ss_dssp TTHHHHHHHHHHHTTCCCEEESSTTT-TGG-----GSCHHHHHHHHHHHHHHS-----------------CSSSCEEEE-
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHHh-----------------CCCCcEEEe-
Confidence 4677777777889999955543 322 111 245566666666555433 123345666
Q ss_pred cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCC-CeEEEec----CCCHHHHHHHHHHHHhcCCCccEEE
Q 020275 132 IGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGP-DLLAFET----IPNKLEAQALVELLEEENIQIPSWI 206 (328)
Q Consensus 132 iGP~g~~l~~~~eY~g~y~~~~~~~e~~~~h~~qi~~l~~~gv-D~i~~ET----~~~~~E~~a~~~~~~~~~~~~pv~i 206 (328)
+|.. +.++. .++++...+.|+ |.+++=+ -|+.+++..-.+.+.+.. ++|+++
T Consensus 83 vg~~------------------~t~~a----i~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiil 139 (311)
T 3h5d_A 83 VGTN------------------DTRDS----IEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADAS-DLPIII 139 (311)
T ss_dssp CCCS------------------SHHHH----HHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSC-SSCEEE
T ss_pred CCCc------------------CHHHH----HHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEE
Confidence 4331 22332 445666677786 9987764 246667666666665554 799985
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC
Q 020275 207 CFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP 244 (328)
Q Consensus 207 s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~ 244 (328)
==.. +++.-.-+.+...+ +.+.++ .+||--++
T Consensus 140 Yn~P---~~tg~~l~~~~~~~-La~~pn--IvgiKdss 171 (311)
T 3h5d_A 140 YNIP---GRVVVELTPETMLR-LADHPN--IIGVKECT 171 (311)
T ss_dssp EECH---HHHSSCCCHHHHHH-HHTSTT--EEEEEECS
T ss_pred Eecc---cccCCCCCHHHHHH-HhcCCC--EEEEEeCC
Confidence 4321 22212234444444 434344 56666555
No 438
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=32.67 E-value=3.2e+02 Score=25.68 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=44.4
Q ss_pred HHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCC---------C--CCCCCCCHHH---HHHHHHhcC
Q 020275 168 VLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDG---------E--NAPSGESFKE---CLDIINKSG 233 (328)
Q Consensus 168 ~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~---------~--~l~~G~~~~~---~~~~~~~~~ 233 (328)
.+++.|+..+ ++-|..|++.+.+.+++.+...+|++-+....+ + .-+-|.+.++ +++.+.+..
T Consensus 135 ~a~~~gv~~~---~vds~~el~~l~~~a~~~~~~~~V~lRVn~~~~~~~~~~i~tG~~~sRfGi~~~e~~~ll~~~~~~~ 211 (443)
T 3vab_A 135 FALEAGIYCF---NVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLP 211 (443)
T ss_dssp HHHHHTCSEE---EECCHHHHHHHHHHHHHHTCCEEEEEEEECCBCTTTCCBC---CCCCSSSEEGGGHHHHHHHHHHST
T ss_pred HHHHCCCCEE---EECCHHHHHHHHHHHHhcCCCceEEEEECCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHhhCC
Confidence 3345677644 456788999888888877656778887764311 1 1234544444 444444444
Q ss_pred CceEEEECCC
Q 020275 234 KVNAVGINCA 243 (328)
Q Consensus 234 ~~~~iGvNC~ 243 (328)
++...|+-|.
T Consensus 212 ~l~l~Glh~H 221 (443)
T 3vab_A 212 GLNVVGIDMH 221 (443)
T ss_dssp TEEEEEEECC
T ss_pred CceEEEEEEe
Confidence 5677788773
No 439
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=32.64 E-value=2.6e+02 Score=24.70 Aligned_cols=96 Identities=11% Similarity=0.094 Sum_probs=55.7
Q ss_pred HHHHHHHhcCCCeEEEecCC--------CHHHHHHHHHHHHhcC--CCccEEEEEEecCCCCCC-CCC----CHHHHHHH
Q 020275 164 RRLQVLVESGPDLLAFETIP--------NKLEAQALVELLEEEN--IQIPSWICFSSVDGENAP-SGE----SFKECLDI 228 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~--------~~~E~~a~~~~~~~~~--~~~pv~is~~~~~~~~l~-~G~----~~~~~~~~ 228 (328)
+-++.|.++|++.+-+|-.. +.+|...-++++++.. .+.|++|.-..+ ..+. .|. .++++++.
T Consensus 96 ~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtd--a~~~~~g~~~~~~~~~ai~R 173 (275)
T 2ze3_A 96 RTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTD--TFLKGHGATDEERLAETVRR 173 (275)
T ss_dssp HHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECC--TTTTTCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEech--hhhccccccchhhHHHHHHH
Confidence 45666778999999999764 3444444444444320 037877666443 2221 122 46777754
Q ss_pred HHh--cCCceEEEECCCC-hhhhHHHHHHHHhhcCCeEEE
Q 020275 229 INK--SGKVNAVGINCAP-PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 229 ~~~--~~~~~~iGvNC~~-p~~~~~~l~~l~~~~~~pl~~ 265 (328)
... ..++++|=+-|.. ++.+..+. +..+.|+.+
T Consensus 174 a~ay~eAGAd~i~~e~~~~~~~~~~i~----~~~~~P~n~ 209 (275)
T 2ze3_A 174 GQAYADAGADGIFVPLALQSQDIRALA----DALRVPLNV 209 (275)
T ss_dssp HHHHHHTTCSEEECTTCCCHHHHHHHH----HHCSSCEEE
T ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHH----HhcCCCEEE
Confidence 432 2588999999974 45554444 444678743
No 440
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=32.56 E-value=75 Score=28.11 Aligned_cols=46 Identities=20% Similarity=0.152 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 161 FHRRRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
.|.+++..++++|..++. |- -.++.|++.+++++++.+ +++++.+.
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~~~~~~~ 124 (294)
T 1lc0_A 77 SHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKG--RVLHEEHV 124 (294)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhC--CEEEEEEh
Confidence 378888888889987665 83 458899999999998875 67776664
No 441
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=32.50 E-value=77 Score=28.94 Aligned_cols=51 Identities=8% Similarity=0.023 Sum_probs=35.2
Q ss_pred HHHHHHHhcCCCeEEEecCCCH---HHHHHHHHHHHhcCCCccEEEEEEecCCCCC
Q 020275 164 RRLQVLVESGPDLLAFETIPNK---LEAQALVELLEEENIQIPSWICFSSVDGENA 216 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l 216 (328)
..++.+++.|++.|++|++.+- .++..+++.+.+. ++||+++-.|..+.-.
T Consensus 232 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--Gi~VV~~Sr~~~G~v~ 285 (327)
T 1o7j_A 232 YLYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKALEK--GVVVMRSTRTGNGIVP 285 (327)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSBSCBC
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CceEEEECCCCCCCcC
Confidence 4677788889999999987652 4444444444444 4999988877655443
No 442
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=32.43 E-value=1.8e+02 Score=26.59 Aligned_cols=38 Identities=16% Similarity=-0.006 Sum_probs=26.8
Q ss_pred CCceEEEECCC-ChhhhHHHHHHHHhhc--CCeEEEEeCCC
Q 020275 233 GKVNAVGINCA-PPQFVENLICYFKELT--KKAIVVYPNSG 270 (328)
Q Consensus 233 ~~~~~iGvNC~-~p~~~~~~l~~l~~~~--~~pl~~ypN~g 270 (328)
.+..+|=+++. ++......++.+++.. +.+|.+-.|.|
T Consensus 159 ~Gf~~iKik~g~~~~~~~e~v~avr~a~g~d~~l~vDan~~ 199 (379)
T 2rdx_A 159 AGYRQFQIKVGADWQSDIDRIRACLPLLEPGEKAMADANQG 199 (379)
T ss_dssp TTCCEEEEECCSCHHHHHHHHHHHGGGSCTTCEEEEECTTC
T ss_pred cCCCEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 35677778776 3566667777777765 35788888876
No 443
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=32.41 E-value=61 Score=29.24 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=22.1
Q ss_pred HHHHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
|.+.+..++++|..++ +|- -.++.|++.+++++++.+ +++++.+
T Consensus 94 H~~~~~~al~aGkhVl-~EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~ 139 (330)
T 4ew6_A 94 RYEAAYKALVAGKHVF-LEKPPGATLSEVADLEALANKQG--ASLFASW 139 (330)
T ss_dssp HHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--CCEEECC
T ss_pred HHHHHHHHHHcCCcEE-EeCCCCCCHHHHHHHHHHHHhcC--CeEEEEe
Confidence 4555555555555444 352 235555555555555543 4444443
No 444
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=32.38 E-value=28 Score=25.61 Aligned_cols=43 Identities=21% Similarity=0.465 Sum_probs=27.5
Q ss_pred hhhHHHHHHHHhhcCCe----EEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc
Q 020275 246 QFVENLICYFKELTKKA----IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS 301 (328)
Q Consensus 246 ~~~~~~l~~l~~~~~~p----l~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (328)
+....+|..+.+.+..| |+.||+.+ ...+|+..++.+++|+..
T Consensus 31 ~e~d~ll~~f~~~teHP~gSDLIfyP~~~-------------~e~spE~Iv~~ik~wRa~ 77 (86)
T 1fr2_A 31 EELVKLVTHFAEMTEHPSGSDLIYYPKEG-------------DDDSPSGIVNTVKQWRAA 77 (86)
T ss_dssp HHHHHHHHHHHHHHCCTTTTHHHHSCCTT-------------CCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcCceeecCCCC-------------CCCCHHHHHHHHHHHHHH
Confidence 33455666665554433 66677643 124799999999999643
No 445
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=32.31 E-value=76 Score=28.97 Aligned_cols=45 Identities=13% Similarity=0.064 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 161 FHRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
.|.+++..++++|..+| +| --.+++|++.+++++++.+ +++++.+
T Consensus 100 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~l~v~~ 146 (361)
T 3u3x_A 100 ERAELAIRAMQHGKDVL-VDKPGMTSFDQLAKLRRVQAETG--RIFSILY 146 (361)
T ss_dssp HHHHHHHHHHHTTCEEE-EESCSCSSHHHHHHHHHHHHTTC--CCEEEEC
T ss_pred HHHHHHHHHHHCCCeEE-EeCCCCCCHHHHHHHHHHHHHcC--CEEEEec
Confidence 35555555555555433 35 2235556666655555442 4444444
No 446
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=32.27 E-value=2.5e+02 Score=26.82 Aligned_cols=83 Identities=17% Similarity=0.117 Sum_probs=48.2
Q ss_pred cCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHH
Q 020275 172 SGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVEN 250 (328)
Q Consensus 172 ~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~ 250 (328)
-++|+|.+.-. .+.+++..+++.+++. .++|+.|- . .+-..++.+++.... ..++-.+++ .+.+..
T Consensus 126 ~~~D~ial~~~s~dpe~~~~vVk~V~e~-~dvPL~ID--S------~dpevleaALea~a~-~~plI~sat---~dn~e~ 192 (446)
T 4djd_C 126 YTIQAIAIRHDADDPAAFKAAVASVAAA-TQLNLVLM--A------DDPDVLKEALAGVAD-RKPLLYAAT---GANYEA 192 (446)
T ss_dssp ECCCEEEEECCSSSTHHHHHHHHHHHTT-CCSEEEEE--C------SCHHHHHHHHGGGGG-GCCEEEEEC---TTTHHH
T ss_pred ccCcEEEEEeCCCCHHHHHHHHHHHHHh-CCCCEEEe--c------CCHHHHHHHHHhhcC-cCCeeEecc---hhhHHH
Confidence 47899998876 5578888889888875 36775543 1 132333444443332 245655555 334434
Q ss_pred HHHHHHhhcCCeEEEEeC
Q 020275 251 LICYFKELTKKAIVVYPN 268 (328)
Q Consensus 251 ~l~~l~~~~~~pl~~ypN 268 (328)
..+...+ .+.|+++..|
T Consensus 193 m~~lAa~-y~~pVi~~~~ 209 (446)
T 4djd_C 193 MTALAKE-NNCPLAVYGN 209 (446)
T ss_dssp HHHHHHH-TTCCEEEECS
T ss_pred HHHHHHH-cCCcEEEEec
Confidence 4433333 3678888776
No 447
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=31.89 E-value=2.8e+02 Score=24.80 Aligned_cols=54 Identities=9% Similarity=0.015 Sum_probs=38.8
Q ss_pred HHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHH
Q 020275 190 ALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFK 256 (328)
Q Consensus 190 a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~ 256 (328)
.+++.+++....+|+-|.+ ++++++.+.+.. +++.|.+--.+|+.+..+++.++
T Consensus 187 ~Av~~ar~~~~~~~IeVEv-----------~tl~ea~eAl~a--GaD~I~LDn~~~~~l~~av~~~~ 240 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEVEV-----------TNLDELNQAIAA--KADIVMLDNFSGEDIDIAVSIAR 240 (287)
T ss_dssp HHHHHHHHHCTTSCEEEEE-----------SSHHHHHHHHHT--TCSEEEEESCCHHHHHHHHHHHT
T ss_pred HHHHHHHhhCCCCcEEEEe-----------CCHHHHHHHHHc--CCCEEEEcCCCHHHHHHHHHhhc
Confidence 4455556554467887755 256788777753 68999998888998988888775
No 448
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=31.86 E-value=59 Score=29.13 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=15.5
Q ss_pred HHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhc
Q 020275 162 HRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEE 198 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~ 198 (328)
|.+++...+++|.+++ +| --.++.|++.+++++++.
T Consensus 85 H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~ 122 (312)
T 3o9z_A 85 HYPQIRMALRLGANAL-SEKPLVLWPEEIARLKELEART 122 (312)
T ss_dssp HHHHHHHHHHTTCEEE-ECSSSCSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCeEE-EECCCCCCHHHHHHHHHHHHHc
Confidence 3444444444444433 24 123444444444444444
No 449
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=31.73 E-value=2.9e+02 Score=26.08 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhcCCC-eEEEecCC----------CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHH
Q 020275 158 LKDFHRRRLQVLVESGPD-LLAFETIP----------NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECL 226 (328)
Q Consensus 158 ~~~~h~~qi~~l~~~gvD-~i~~ET~~----------~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 226 (328)
+.+..+..++...+.|++ .|++|.+| +..++..+++.+ +.+-.+-+.+.+ ......|.++.+.+
T Consensus 208 ~~e~L~~~~~~A~~~Gv~v~l~IEp~p~~~~~~~~~~t~~~al~li~~v---g~pn~vgv~lDt--~H~~~~g~di~~~i 282 (438)
T 1a0c_A 208 FARFLHMAVDYAKEIGFEGQFLIEPKPKEPTKHQYDFDVANVLAFLRKY---DLDKYFKVNIEA--NHATLAFHDFQHEL 282 (438)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEECCCSCSSSSEESSCSHHHHHHHHHHT---TCTTTEEEEEEH--HHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCCCCCCCCcccCCHHHHHHHHHHc---CCCCeEEEEEEh--hhhhhcCCCHHHHH
Confidence 344444444444456776 68889774 455655555443 311125555532 22234677888777
Q ss_pred HHHHhcCCceEEEECC
Q 020275 227 DIINKSGKVNAVGINC 242 (328)
Q Consensus 227 ~~~~~~~~~~~iGvNC 242 (328)
+.+.....+..|=+|=
T Consensus 283 ~~~~~~~~L~hvHlnD 298 (438)
T 1a0c_A 283 RYARINGVLGSIDANT 298 (438)
T ss_dssp HHHHHTTCEEEEECCB
T ss_pred HHhcCCCcEEEEECCC
Confidence 6553223344555553
No 450
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=31.50 E-value=1.5e+02 Score=25.10 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=48.9
Q ss_pred HHHHHHhcCCCeE--EEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcC--CceEEEE
Q 020275 165 RLQVLVESGPDLL--AFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSG--KVNAVGI 240 (328)
Q Consensus 165 qi~~l~~~gvD~i--~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~--~~~~iGv 240 (328)
.++.+.+.|+|.+ ..|..+.. +...++.+++.+ +++++++.. .++++ .+..+.. . +++.|++
T Consensus 79 ~i~~~~~agad~v~vH~~~~~~~--~~~~~~~i~~~g--~~igv~~~p--------~t~~e-~~~~~~~-~~~~~d~vl~ 144 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEVSRDN--WQELIQSIKAKG--MRPGVSLRP--------GTPVE-EVFPLVE-AENPVELVLV 144 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTTT--HHHHHHHHHHTT--CEEEEEECT--------TSCGG-GGHHHHH-SSSCCSEEEE
T ss_pred HHHHHHHcCCCEEEECCCCcccH--HHHHHHHHHHcC--CCEEEEEeC--------CCCHH-HHHHHHh-cCCCCCEEEE
Confidence 3666677899999 55654432 145666677664 788877732 23332 2333322 1 3556665
Q ss_pred ---CCC-----ChhhhHHHHHHHHhhc-CCeEEE
Q 020275 241 ---NCA-----PPQFVENLICYFKELT-KKAIVV 265 (328)
Q Consensus 241 ---NC~-----~p~~~~~~l~~l~~~~-~~pl~~ 265 (328)
+-+ .++.....++++++.. +.|+.+
T Consensus 145 ~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v 178 (228)
T 1h1y_A 145 MTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV 178 (228)
T ss_dssp ESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEE
T ss_pred EeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEE
Confidence 322 1345566677777776 567654
No 451
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=31.37 E-value=2.7e+02 Score=28.50 Aligned_cols=129 Identities=16% Similarity=0.102 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEE-ecC-C-CH--HHHHHHHHHHHhcC---CCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 156 EKLKDFHRRRLQVLVESGPDLLAF-ETI-P-NK--LEAQALVELLEEEN---IQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 156 ~e~~~~h~~qi~~l~~~gvD~i~~-ET~-~-~~--~E~~a~~~~~~~~~---~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
+.+...|.++++.|.+.|++.|-+ |-. . ++ ....++..+.+... .+.++++...|. +.. ...
T Consensus 177 ~~L~~~y~~~l~~L~~~Ga~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~~~~v~lhtyfG-~~~---------~~~ 246 (755)
T 2nq5_A 177 KSLLPLYKQVFTELVKAGASYIQVDEPIFVTDEGKDYLQAAKAVYAYFAKEVPDAKFIFQTYFE-GLI---------DSQ 246 (755)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECGGGGSSGGGGGHHHHHHHHHHHHHHSTTCEEEEECCSS-CCT---------THH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeCCcccCCCCHHHHHHHHHHHHHHHhcccCCcEEEEEeCC-ChH---------HHH
Confidence 677788999999999999999753 311 1 11 11222333333321 035676664442 211 344
Q ss_pred HHHhcCCceEEEECCCC-h-hhhHHHHHHHHhhc--CCe--EEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc
Q 020275 228 IINKSGKVNAVGINCAP-P-QFVENLICYFKELT--KKA--IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS 301 (328)
Q Consensus 228 ~~~~~~~~~~iGvNC~~-p-~~~~~~l~~l~~~~--~~p--l~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (328)
.+.+ .++++|++-++. + +.+ +.+.+.. ++. +++-+ + ...|.. ++++..+.+++.++.
T Consensus 247 ~l~~-l~vd~l~lD~v~~~~~~l----~~l~~~~~~~k~L~~GvVd-------g-rniw~~----d~e~v~~~l~~~~~~ 309 (755)
T 2nq5_A 247 VLSQ-LPVDAFGLDFVYGLEENL----EAIKTGAFKGKEIFAGVID-------G-RNIWSS----DFVKTSALLETIEEQ 309 (755)
T ss_dssp HHTT-SSCSEEEEESSSSHHHHH----HHHHTTTTTTSEEEEEEEC-------T-TSCBCC----CHHHHHHHHHHHHHT
T ss_pred HHHh-CCCCEEEEEecCCChhhH----HHHHHhcCCCCEEEEEeeC-------C-cccCCC----CHHHHHHHHHHHHhh
Confidence 5554 479999999875 4 233 3333322 232 33433 1 234643 577788877777655
Q ss_pred CCe--EEeecCCC
Q 020275 302 GAK--LIGGCCRT 312 (328)
Q Consensus 302 G~~--iiGGCCGt 312 (328)
.. +|.=-||.
T Consensus 310 -~~~l~vsPsCsL 321 (755)
T 2nq5_A 310 -SAALTIQPSCSL 321 (755)
T ss_dssp -SSEEEEEESSCG
T ss_pred -cCCEEEcCCCCc
Confidence 43 78888875
No 452
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=31.24 E-value=3e+02 Score=24.97 Aligned_cols=102 Identities=10% Similarity=0.150 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhcCCCeEEEec----------------CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCH--
Q 020275 161 FHRRRLQVLVESGPDLLAFET----------------IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESF-- 222 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~ET----------------~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~-- 222 (328)
.+.+.++.+.+.|+|.|=+-. +.+..-+..+++++++.- +.||.+-+...-+ +..+.
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~----~~~~~~~ 145 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLE----GKETYRG 145 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBT----TCCCHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcC----ccccHHH
Confidence 355667777788999986663 123445666777777653 6898886542111 11233
Q ss_pred -HHHHHHHHhcCCceEEEECCCC------h-------hhhHHHHHHHHhhc-CCeEEEEeCCC
Q 020275 223 -KECLDIINKSGKVNAVGINCAP------P-------QFVENLICYFKELT-KKAIVVYPNSG 270 (328)
Q Consensus 223 -~~~~~~~~~~~~~~~iGvNC~~------p-------~~~~~~l~~l~~~~-~~pl~~ypN~g 270 (328)
.+.+..+.+ .++++|-+.+.. + ..-..+++.+++.. +.|+++ |+|
T Consensus 146 ~~~~a~~l~~-aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVia--nGg 205 (350)
T 3b0p_A 146 LAQSVEAMAE-AGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVT--NGG 205 (350)
T ss_dssp HHHHHHHHHH-TTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEE--ESS
T ss_pred HHHHHHHHHH-cCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEE--ECC
Confidence 344555544 477887776531 1 12346677888776 678654 555
No 453
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=31.18 E-value=1.8e+02 Score=26.05 Aligned_cols=75 Identities=13% Similarity=0.050 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCeEE--EecC-----------CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 163 RRRLQVLVESGPDLLA--FETI-----------PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~--~ET~-----------~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
.+.++.|.++|+|.+. +||. .+.++...+++.+++.+ .++...+-+ |. |++.++.++.+
T Consensus 152 ~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~G--i~v~~~~i~---Gl---get~e~~~~~l 223 (350)
T 3t7v_A 152 NATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQG--YCVEDGILT---GV---GNDIESTILSL 223 (350)
T ss_dssp HHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHT--CEEEEEEEE---SS---SCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcC--CeEccceEe---ec---CCCHHHHHHHH
Q ss_pred Hhc--CCceEEEECCCCh
Q 020275 230 NKS--GKVNAVGINCAPP 245 (328)
Q Consensus 230 ~~~--~~~~~iGvNC~~p 245 (328)
... .++..++++...|
T Consensus 224 ~~l~~l~~~~v~~~~f~p 241 (350)
T 3t7v_A 224 RGMSTNDPDMVRVMTFLP 241 (350)
T ss_dssp HHHHHTCCSEEEEEECCC
T ss_pred HHHHhCCCCEEEecceee
No 454
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=31.16 E-value=2.7e+02 Score=24.57 Aligned_cols=144 Identities=6% Similarity=-0.022 Sum_probs=79.8
Q ss_pred HHHHHHhcCCCeEEEecC--CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 165 RLQVLVESGPDLLAFETI--PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
+++.+.+ .+|++-+-.+ .+.. .++.+.. .++||.++=-.. + +=..+..+++.+....+...+.+-|
T Consensus 87 ~~~~l~~-~vd~~~IgA~~~rn~~----ll~~~a~--~~~PV~lK~G~~--~---t~~e~~~Av~~i~~~GN~~i~L~~r 154 (267)
T 2nwr_A 87 QAEPVAE-VADIIQIPAFLCRQTD----LLLAAAK--TGRAVNVKKGQF--L---APWDTKNVVEKLKFGGAKEIYLTER 154 (267)
T ss_dssp GHHHHHT-TCSEEEECGGGTTCHH----HHHHHHT--TTSEEEEECCTT--C---CGGGGHHHHHHHHHTTCSSEEEEEC
T ss_pred hHHHHHh-cCCEEEECcccccCHH----HHHHHHc--CCCcEEEeCCCC--C---CHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 5566665 6999987753 3332 4444443 369999764210 1 1124556777776555667888888
Q ss_pred CC--h-h---hhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCC--eEE--------
Q 020275 243 AP--P-Q---FVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGA--KLI-------- 306 (328)
Q Consensus 243 ~~--p-~---~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~ii-------- 306 (328)
.. + + .=...+..+++. . |+++=|+=+........+...+ ..+.....+...+..|+ .+|
T Consensus 155 G~~~~y~~~~~dl~~i~~lk~~-~-pVivD~sH~~q~p~G~s~hs~g---~~~~~~~ia~aava~Ga~G~mIE~H~~pd~ 229 (267)
T 2nwr_A 155 GTTFGYNNLVVDFRSLPIMKQW-A-KVIYDATHSVQLPGGLGDKSGG---MREFIFPLIRAAVAVGCDGVFMETHPEPEK 229 (267)
T ss_dssp CEECSSSCEECCTTHHHHHTTT-S-EEEEETTGGGCCTTC------C---CGGGHHHHHHHHHHHCCSEEEEEEESCGGG
T ss_pred CCCCCCCccccCHHHHHHHHHc-C-CEEEcCCcccccCCCcCcCCCC---chhHHHHHHHHHHHcCCCEEEEEecCCccc
Confidence 53 2 1 122366677665 4 9888776543111100001001 12334455566678888 354
Q ss_pred ---eecCCCChHHHHHHHHHHh
Q 020275 307 ---GGCCRTTPSTIQAVSKVLK 325 (328)
Q Consensus 307 ---GGCCGt~P~hI~al~~~l~ 325 (328)
-|-.-.+|+..+.|-+.++
T Consensus 230 al~Dg~qsl~p~~l~~l~~~i~ 251 (267)
T 2nwr_A 230 ALSDASTQLPLSQLEGIIEAIL 251 (267)
T ss_dssp CSSCTTTCEEGGGHHHHHHHHH
T ss_pred CCCccccCCCHHHHHHHHHHHH
Confidence 5667778888887766654
No 455
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=31.05 E-value=3.1e+02 Score=25.09 Aligned_cols=223 Identities=17% Similarity=0.149 Sum_probs=132.7
Q ss_pred hHHHHHHHHHHHHhccceeecCCcCCChhhHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCceEEEe-
Q 020275 53 PHLVKRVHLEYLEAGADILVTSSYQATIPGFLSR-GLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAA- 130 (328)
Q Consensus 53 Pe~V~~iH~~yl~AGAdiI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~VaG- 130 (328)
.|.+.+.-++-++.|-.-|.. |...+..++.. |-+...-.-++.+|++..+++. .+.+|..
T Consensus 65 id~l~~~~~~~~~lGi~~v~L--Fgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~---------------pdl~vitD 127 (337)
T 1w5q_A 65 IDQLLIEAEEWVALGIPALAL--FPVTPVEKKSLDAAEAYNPEGIAQRATRALRERF---------------PELGIITD 127 (337)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE--EECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHC---------------TTSEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccCccCCCCChHHHHHHHHHHHC---------------CCeEEEEe
Confidence 366777778889999875554 33323333332 2110011247778887777653 2244444
Q ss_pred -ecCCcccCcCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCC-CccEEEE
Q 020275 131 -SIGSYGAYLADGSEY-SGNYGPGVDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENI-QIPSWIC 207 (328)
Q Consensus 131 -siGP~g~~l~~~~eY-~g~y~~~~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~-~~pv~is 207 (328)
|+-||-..-++|--. .| .+.-++-.+...+|+-..+++|+|++.==-|-+- .+.+|.+++.+.+. +.|++ |
T Consensus 128 vcLc~YT~HGHcGil~~~g----~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v~Im-s 201 (337)
T 1w5q_A 128 VCLCEFTTHGQCGILDDDG----YVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDG-RIGAIREALESAGHTNVRVM-A 201 (337)
T ss_dssp ECSTTTBTTCCSSCBCTTS----CBCHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-HHHHHHHHHHHTTCTTCEEE-E
T ss_pred eecccCCCCCcceeeCCCC----cCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHHCCCCCceee-h
Confidence 456665443333211 11 2566777788888888889999999997666664 56777888887653 35554 4
Q ss_pred EEecCC---------------------C---CCCCCCCHHHHHHHH--HhcCCceEEEECCCChhhhHHHHHHHHhhcCC
Q 020275 208 FSSVDG---------------------E---NAPSGESFKECLDII--NKSGKVNAVGINCAPPQFVENLICYFKELTKK 261 (328)
Q Consensus 208 ~~~~~~---------------------~---~l~~G~~~~~~~~~~--~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~ 261 (328)
-+.+=- . .+..+.+ .++++.+ +-..+.+.|.|-=..| .+.+++.+++.++.
T Consensus 202 YsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~-~EAlrE~~~Di~EGAD~vMVKPal~--YLDIir~vk~~~~~ 278 (337)
T 1w5q_A 202 YSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANS-DEALHEVAADLAEGADMVMVKPGMP--YLDIVRRVKDEFRA 278 (337)
T ss_dssp EEEEBCCGGGHHHHHC----------CGGGTSBCTTCS-HHHHHHHHHHHHTTCSEEEEESCGG--GHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCCh-HHHHHHHHhhHHhCCCEEEEcCCCc--hHHHHHHHHHhcCC
Confidence 432211 0 1212222 3444433 1124788888876644 45777888888899
Q ss_pred eEEEEeCCCCc---cCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 262 AIVVYPNSGEV---WDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 262 pl~~ypN~g~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
|+.+|--+|+- .-...+.|+ +...+.|....++.+|+.+|
T Consensus 279 PvaaYqVSGEYAMikaAa~~Gwi-----D~~~v~Esl~~~kRAGAd~I 321 (337)
T 1w5q_A 279 PTFVYQVSGEYAMHMGAIQNGWL-----AESVILESLTAFKRAGADGI 321 (337)
T ss_dssp CEEEEECHHHHHHHHHHHHTTSS-----CTTHHHHHHHHHHHHTCSEE
T ss_pred CEEEEEcCcHHHHHHHHHHcCCc-----cHHHHHHHHHHHHhcCCCEE
Confidence 99999999851 112234464 32247777778888998776
No 456
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=30.95 E-value=1.8e+02 Score=24.99 Aligned_cols=127 Identities=16% Similarity=0.166 Sum_probs=0.0
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHh---cCCCccEEEEEEecCC-------CCCCCCCCHHHHHHHHHhc-CC
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEE---ENIQIPSWICFSSVDG-------ENAPSGESFKECLDIINKS-GK 234 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~---~~~~~pv~is~~~~~~-------~~l~~G~~~~~~~~~~~~~-~~ 234 (328)
++.+.+.|+|++-+=.....+-++.+++.+++ .+...|-.+.++.... ..+.-..++.+.+..+... .+
T Consensus 75 ~~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~ 154 (246)
T 2yyu_A 75 MKGLARVGADLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKE 154 (246)
T ss_dssp HHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEECCCCHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q ss_pred ceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCeEE
Q 020275 235 VNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAKLI 306 (328)
Q Consensus 235 ~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ii 306 (328)
..+.|+-|..-+ ...++++.. ..++.+-|.-+ ......+......-..+.++.|+.++
T Consensus 155 ~G~~g~V~~~~e--i~~lr~~~~--~~~i~V~gGI~----------~~g~~~~dq~rv~t~~~a~~aGad~i 212 (246)
T 2yyu_A 155 SGLDGVVCSANE--AAFIKERCG--ASFLAVTPGIR----------FADDAAHDQVRVVTPRKARALGSDYI 212 (246)
T ss_dssp HTCCEEECCHHH--HHHHHHHHC--TTSEEEECCCC----------CCC-------CCCCHHHHHHHTCSEE
T ss_pred hCCCEEEeCHHH--HHHHHHhcC--CCCEEEeCCcC----------CCCCCcccccccCCHHHHHHcCCCEE
No 457
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=30.86 E-value=3.2e+02 Score=25.23 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=45.3
Q ss_pred HHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCC-----------CCCCCCC-----HHHHHHHH
Q 020275 166 LQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGE-----------NAPSGES-----FKECLDII 229 (328)
Q Consensus 166 i~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~-----------~l~~G~~-----~~~~~~~~ 229 (328)
++.+++.++-.+ ++.|..|++.+.+.+++.+...+|++-+....+. ..+-|.+ +.++++.+
T Consensus 120 i~~a~~~~i~~~---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tG~~~~rfG~~~~~~~~~~~~~~~ 196 (434)
T 1twi_A 120 IIMGIEANIRAF---NVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMA 196 (434)
T ss_dssp HHHHHHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSHHHHHHHHH
T ss_pred HHHHHHCCCCEE---EECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCCCCCcccccCCCCCCccCChhhhHHHHHHHHH
Confidence 333445564333 5667888888888777766567888888754211 1234533 45556656
Q ss_pred HhcCCceEEEECCC
Q 020275 230 NKSGKVNAVGINCA 243 (328)
Q Consensus 230 ~~~~~~~~iGvNC~ 243 (328)
.+.+++...|+-|.
T Consensus 197 ~~~~~l~l~Gl~~H 210 (434)
T 1twi_A 197 LEMEYVNVVGVHCH 210 (434)
T ss_dssp HHCSSEEEEEEECC
T ss_pred HhCCCCCEEEEEEE
Confidence 55556777787773
No 458
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=30.86 E-value=1.5e+02 Score=25.93 Aligned_cols=28 Identities=11% Similarity=0.338 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEe
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFE 180 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~E 180 (328)
-+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~ivia 81 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFA 81 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 3679999999999999999999999874
No 459
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=30.56 E-value=27 Score=25.64 Aligned_cols=42 Identities=14% Similarity=0.262 Sum_probs=28.9
Q ss_pred hhHHHHHHHHhhcCCe----EEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHc
Q 020275 247 FVENLICYFKELTKKA----IVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDS 301 (328)
Q Consensus 247 ~~~~~l~~l~~~~~~p----l~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (328)
.+..+|..+.+.+..| |+.||+.+ ...+|+..++.+++|+..
T Consensus 31 ~~d~ll~~f~~~teHP~gSDLIfyP~~~-------------~e~spE~Iv~~ik~wRa~ 76 (85)
T 1gxg_A 31 KQDDNLEHFISVTEHPSGSDLIYYPEGN-------------NDGSPEAVIKEIKEWRAA 76 (85)
T ss_dssp HHHHHHHHHHHTTCCTTTTHHHHSCCTT-------------CCSSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCCcCceeecCCCC-------------CCCCHHHHHHHHHHHHHH
Confidence 3667777777665444 66677643 124799999999999643
No 460
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=30.49 E-value=1.3e+02 Score=28.14 Aligned_cols=66 Identities=15% Similarity=0.212 Sum_probs=42.2
Q ss_pred CCHHHHHHHHHHHHHHH-HhcCCCeEEEec---CCCH-HHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 153 VDLEKLKDFHRRRLQVL-VESGPDLLAFET---IPNK-LEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l-~~~gvD~i~~ET---~~~~-~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
.+.+.+ +.-++.+ .+.+||.+++-. +.+. .=++++++++++.+.++|+++.|. |+...+..+
T Consensus 284 a~~e~~----~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~---------G~~~~~~~~ 350 (397)
T 3ufx_B 284 AKADVV----YNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA---------GTAEEEAKK 350 (397)
T ss_dssp CCHHHH----HHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEE---------EECHHHHHH
T ss_pred CCHHHH----HHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEcc---------CCCHHHHHH
Confidence 455543 4445544 457799887632 2333 335677888887645799999984 556777777
Q ss_pred HHHh
Q 020275 228 IINK 231 (328)
Q Consensus 228 ~~~~ 231 (328)
.+.+
T Consensus 351 ~l~~ 354 (397)
T 3ufx_B 351 LLEG 354 (397)
T ss_dssp HTTT
T ss_pred HHHh
Confidence 6654
No 461
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=30.32 E-value=57 Score=29.56 Aligned_cols=46 Identities=17% Similarity=0.298 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 161 FHRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
.|.+++...+++|..+|. | --.++.|++.+++++++.+ +.+++.+.
T Consensus 106 ~H~~~a~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~l~vg~~ 153 (393)
T 4fb5_A 106 FHAEMAIAALEAGKHVWC-EKPMAPAYADAERMLATAERSG--KVAALGYN 153 (393)
T ss_dssp GHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHSS--SCEEECCG
T ss_pred HHHHHHHHHHhcCCeEEE-ccCCcccHHHHHHhhhhHHhcC--Cccccccc
Confidence 478888888888887654 7 4567888888888888764 56655553
No 462
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=30.24 E-value=31 Score=30.69 Aligned_cols=29 Identities=28% Similarity=0.376 Sum_probs=25.4
Q ss_pred cCCChHHHHHHHHHHHHhccceeecCC-cC
Q 020275 49 LIKQPHLVKRVHLEYLEAGADILVTSS-YQ 77 (328)
Q Consensus 49 ll~~Pe~V~~iH~~yl~AGAdiI~TnT-y~ 77 (328)
+++++|.|++.-+-=++||||.|.|.| |.
T Consensus 145 ~L~d~e~i~~a~~ia~eaGADfVKTSTGf~ 174 (260)
T 1p1x_A 145 ELKDEALIRKASEISIKAGADFIKTSTGKV 174 (260)
T ss_dssp HHCSHHHHHHHHHHHHHTTCSEEECCCSCS
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 358889899999999999999999998 54
No 463
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=29.97 E-value=2.6e+02 Score=23.81 Aligned_cols=92 Identities=8% Similarity=0.041 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCC-C-CCCCCCCHHHHHHHHHhcCCceEEE
Q 020275 162 HRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDG-E-NAPSGESFKECLDIINKSGKVNAVG 239 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~-~-~l~~G~~~~~~~~~~~~~~~~~~iG 239 (328)
..+++++..++|+..|-.. +.+++ +.+|+.- ++|++-- .-++. + ...-+.+++++-..+. .+++.|-
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~---~~~~i----~~ir~~v-~~Pvig~-~k~~~~~~~~~I~~~~~~i~~~~~--aGad~I~ 106 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRIE---GIENL----RTVRPHL-SVPIIGI-IKRDLTGSPVRITPYLQDVDALAQ--AGADIIA 106 (229)
T ss_dssp HHHHHHHHHHTTCSEEEEE---SHHHH----HHHGGGC-CSCEEEE-CBCCCSSCCCCBSCSHHHHHHHHH--HTCSEEE
T ss_pred HHHHHHHHHHCCCcEEEEC---CHHHH----HHHHHhc-CCCEEEE-EeecCCCCceEeCccHHHHHHHHH--cCCCEEE
Confidence 3667888889999999875 44443 3455443 6998632 11111 1 0112235556555443 3688888
Q ss_pred ECCC---ChhhhHHHHHHHHhhcCCeEEE
Q 020275 240 INCA---PPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 240 vNC~---~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
++|+ .|+.+..+++.+++. +.++++
T Consensus 107 l~~~~~~~p~~l~~~i~~~~~~-g~~v~~ 134 (229)
T 3q58_A 107 FDASFRSRPVDIDSLLTRIRLH-GLLAMA 134 (229)
T ss_dssp EECCSSCCSSCHHHHHHHHHHT-TCEEEE
T ss_pred ECccccCChHHHHHHHHHHHHC-CCEEEE
Confidence 8887 377788888888763 445544
No 464
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=29.78 E-value=43 Score=28.90 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.3
Q ss_pred ChHHHHHHHHHHHHhccceeecCC-cC
Q 020275 52 QPHLVKRVHLEYLEAGADILVTSS-YQ 77 (328)
Q Consensus 52 ~Pe~V~~iH~~yl~AGAdiI~TnT-y~ 77 (328)
+++.+.+.-+-=.++|||.|.|+| |.
T Consensus 131 ~~e~i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 131 SPEEIARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 478899999999999999999999 76
No 465
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=29.75 E-value=1.1e+02 Score=27.01 Aligned_cols=49 Identities=18% Similarity=0.184 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSW 205 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~ 205 (328)
.+.+++.++-.+.++.|.+.|+|+|++=..+.- ..+++.+++.- +.||+
T Consensus 49 ~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas---~~~l~~lr~~~-~iPVi 97 (276)
T 2dwu_A 49 RSVEEVQSFVFEMVEFLKQFPLKALVVACNTAA---AATLAALQEAL-SIPVI 97 (276)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHH---HHHHHHHHHHC-SSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHHHHC-CCCEE
Confidence 478999999999999999999999986542221 12344454432 45655
No 466
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=29.64 E-value=67 Score=28.38 Aligned_cols=45 Identities=18% Similarity=0.351 Sum_probs=33.7
Q ss_pred HHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
|.+.+..++++|..+ ++| .-.++.|++.+++++++.+ +++++.+.
T Consensus 79 h~~~~~~al~~gk~v-l~EKP~~~~~~~~~~l~~~a~~~g--~~~~v~~~ 125 (308)
T 3uuw_A 79 HYEIIKILLNLGVHV-YVDKPLASTVSQGEELIELSTKKN--LNLMVGFN 125 (308)
T ss_dssp HHHHHHHHHHTTCEE-EECSSSSSSHHHHHHHHHHHHHHT--CCEEECCG
T ss_pred HHHHHHHHHHCCCcE-EEcCCCCCCHHHHHHHHHHHHHcC--CEEEEeec
Confidence 677778888899884 468 5568899999999988764 55555543
No 467
>2wx3_A MRNA-decapping enzyme 1A; structural protein, trimerization module, P-BODY component, asymmetric assembly; 2.31A {Homo sapiens}
Probab=29.46 E-value=27 Score=22.99 Aligned_cols=17 Identities=18% Similarity=0.397 Sum_probs=15.2
Q ss_pred CCChHHHHHHHHHHHHh
Q 020275 50 IKQPHLVKRVHLEYLEA 66 (328)
Q Consensus 50 l~~Pe~V~~iH~~yl~A 66 (328)
-++++-|.+||+.|+..
T Consensus 25 qnD~~Fl~~IHeAYl~s 41 (51)
T 2wx3_A 25 KNDSSFLSTLHEVYLQV 41 (51)
T ss_dssp HHCHHHHHHHHHHHHHT
T ss_pred HcCHHHHHHHHHHHHHH
Confidence 47899999999999986
No 468
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=29.43 E-value=46 Score=31.30 Aligned_cols=22 Identities=23% Similarity=0.226 Sum_probs=20.3
Q ss_pred HHHHHHHHhcCCCeEEEecCCC
Q 020275 163 RRRLQVLVESGPDLLAFETIPN 184 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~ 184 (328)
+++++.|.+.++-.|.+||+|.
T Consensus 118 ~~l~~~l~~~~it~ia~E~i~~ 139 (381)
T 3p2y_A 118 PELASRLRIADVTAFAMESIPR 139 (381)
T ss_dssp HHHHHHHHHTTCEEEEGGGCCS
T ss_pred HHHHHHHHHCCCeEEEeecccc
Confidence 6789999999999999999995
No 469
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=29.30 E-value=1.7e+02 Score=25.26 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEecCC-----CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHH
Q 020275 155 LEKLKDFHRRRLQVLVESGPDLLAFETIP-----NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDII 229 (328)
Q Consensus 155 ~~e~~~~h~~qi~~l~~~gvD~i~~ET~~-----~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 229 (328)
.+.+.+..++..+...+.||. |.+|+.+ +..++..+++.+ + .| .+.+.++-......|.++.+.++.+
T Consensus 142 ~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l~~~v---~--~~-~vg~~~D~~h~~~~g~d~~~~l~~~ 214 (295)
T 3cqj_A 142 RRRFRDGLKESVEMASRAQVT-LAMEIMDYPLMNSISKALGYAHYL---N--NP-WFQLYPDIGNLSAWDNDVQMELQAG 214 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTCE-EEEECCSSGGGCSHHHHHHHHHHH---C--CT-TEEEECBHHHHHSSSCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCE-EEEeeCCCcccCCHHHHHHHHHhc---C--CC-CeEEEeccchHhhcCCCHHHHHHHh
Confidence 344555555555556667886 6669876 456655555544 3 23 2344433222233577777777655
No 470
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=29.22 E-value=3.3e+02 Score=24.87 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEecC------------------CCHHHHHHHHHHHHh-cCCCccEEEEEEecCCC
Q 020275 154 DLEKLKDFHRRRLQVLVESGPDLLAFETI------------------PNKLEAQALVELLEE-ENIQIPSWICFSSVDGE 214 (328)
Q Consensus 154 ~~~e~~~~h~~qi~~l~~~gvD~i~~ET~------------------~~~~E~~a~~~~~~~-~~~~~pv~is~~~~~~~ 214 (328)
+.+++ .++++.+.+.|.|.|=+=.- .++.+...+++++++ .+.+.++++-.
T Consensus 137 ~~~~~----~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~------ 206 (392)
T 2poz_A 137 TPDEF----ARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDL------ 206 (392)
T ss_dssp SHHHH----HHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC------
T ss_pred CHHHH----HHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEEC------
Confidence 45554 44555566678877643221 245666677888877 45456666533
Q ss_pred CCCCCCCHHHHHHHHHhc--CCceEEEECCCChhhhHHHHHHHHhhcCCeEEEEeCCCCccCC------ccccccC---C
Q 020275 215 NAPSGESFKECLDIINKS--GKVNAVGINCAPPQFVENLICYFKELTKKAIVVYPNSGEVWDG------RAKKWLP---S 283 (328)
Q Consensus 215 ~l~~G~~~~~~~~~~~~~--~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ypN~g~~~d~------~~~~~~~---~ 283 (328)
..|-+++++++.++.. .++..|==-| .++. ...++++++.++.|+++==+.-...+. ...+.+. .
T Consensus 207 --n~~~~~~~a~~~~~~l~~~~i~~iE~P~-~~~~-~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 282 (392)
T 2poz_A 207 --SGGLTTDETIRFCRKIGELDICFVEEPC-DPFD-NGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIG 282 (392)
T ss_dssp --TTCSCHHHHHHHHHHHGGGCEEEEECCS-CTTC-HHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTT
T ss_pred --CCCCCHHHHHHHHHHHHhcCCCEEECCC-Cccc-HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCcc
Confidence 1456788887766432 2343332112 2333 355667777777887651111000000 0001110 0
Q ss_pred CCCChhHHHHHHHHHHHcCCeEEeecCCCChHHHHH
Q 020275 284 KCLGDGKFESFATRWRDSGAKLIGGCCRTTPSTIQA 319 (328)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~G~~iiGGCCGt~P~hI~a 319 (328)
..=...+..+.+......|+.++-+|++ +|--+.+
T Consensus 283 ~~GGit~~~~i~~~A~~~g~~~~~h~~~-s~i~~aa 317 (392)
T 2poz_A 283 TAGGLMETKKICAMAEAYNMRVAPHVCG-SSLIETA 317 (392)
T ss_dssp TSSCHHHHHHHHHHHHTTTCEECCCCCS-SHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCeEecCCCC-CHHHHHH
Confidence 0013445566666667889999999998 7655544
No 471
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=29.12 E-value=62 Score=28.70 Aligned_cols=46 Identities=17% Similarity=0.271 Sum_probs=38.1
Q ss_pred HHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
+..+++.+++ |+|.|++=-+.+.+|++.+.++++..+.+.++++.+
T Consensus 83 ~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~I 128 (284)
T 1sgj_A 83 FEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGL 128 (284)
T ss_dssp HHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 4667888888 999999999999999999999988654357777766
No 472
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=29.11 E-value=3.4e+02 Score=24.92 Aligned_cols=110 Identities=10% Similarity=0.060 Sum_probs=60.0
Q ss_pred CCCHHHH---HHHHHHHHHHHHhcCCCeEEEecC----------C-----------CH-HHHH---HHHHHHHhc-CCCc
Q 020275 152 GVDLEKL---KDFHRRRLQVLVESGPDLLAFETI----------P-----------NK-LEAQ---ALVELLEEE-NIQI 202 (328)
Q Consensus 152 ~~~~~e~---~~~h~~qi~~l~~~gvD~i~~ET~----------~-----------~~-~E~~---a~~~~~~~~-~~~~ 202 (328)
.++.+|+ .+.|.+-++...++|.|.|=+=-- | ++ ..++ .+++++++. +.+
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCC-
Confidence 4666555 455666666677899999844321 1 11 2333 345555553 433
Q ss_pred cEEEEEEecCCC-CCCCCCCHHHHH---HHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCCeEEE
Q 020275 203 PSWICFSSVDGE-NAPSGESFKECL---DIINKSGKVNAVGINCAPPQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 203 pv~is~~~~~~~-~l~~G~~~~~~~---~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~pl~~ 265 (328)
|+++-++..+.. .+.++.+.++++ ..+.+ .+++.|=+-..... .++++.+++..+.|+++
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~--~~~~~~ik~~~~iPvi~ 284 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGK-RGIAFICSREREAD--DSIGPLIKEAFGGPYIV 284 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHH-TTCSEEEEECCCCT--TCCHHHHHHHHCSCEEE
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHH-hCCCEEEECCCCCC--HHHHHHHHHHCCCCEEE
Confidence 999988864321 122334455444 34443 46777766543210 13556667667788765
No 473
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=28.93 E-value=1.6e+02 Score=28.41 Aligned_cols=46 Identities=20% Similarity=0.180 Sum_probs=37.3
Q ss_pred HHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhc-CCCccEEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEE-NIQIPSWICF 208 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~-~~~~pv~is~ 208 (328)
..-++..++.|+|+|++=-+.+.++++.+.+.+++. +...++|..+
T Consensus 175 ~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakI 221 (470)
T 1e0t_A 175 KQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKI 221 (470)
T ss_dssp HHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 344666778899999999999999999999999877 6456677665
No 474
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=28.88 E-value=2e+02 Score=25.23 Aligned_cols=128 Identities=14% Similarity=0.087 Sum_probs=62.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCChhhhHHHHHHHHhhcCC
Q 020275 182 IPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPPQFVENLICYFKELTKK 261 (328)
Q Consensus 182 ~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p~~~~~~l~~l~~~~~~ 261 (328)
.|+.+....+++.+.+. .+ =+-|.+-+. .-+.||..+..+.....+ .+ +..+.+...++.+++..+.
T Consensus 26 dP~~~~~~~~~~~l~~~-aD-~IElG~Pfs--dP~adGp~Iq~a~~~Al~-~G--------~~~~~~~~~v~~ir~~~~~ 92 (271)
T 1ujp_A 26 FPSREGFLQAVEEVLPY-AD-LLEIGLPYS--DPLGDGPVIQRASELALR-KG--------MSVQGALELVREVRALTEK 92 (271)
T ss_dssp SSCHHHHHHHHHHHGGG-CS-SEEEECCCC--C----CHHHHHHHHHHHH-TT--------CCHHHHHHHHHHHHHHCCS
T ss_pred CCChHHHHHHHHHHHhc-CC-EEEECCCCC--CcccccHHHHHHHHHHHH-cC--------CCHHHHHHHHHHHHhcCCC
Confidence 46666555555555543 22 122222221 233466666555543332 22 3356667888888887778
Q ss_pred eEEE--EeCCCCccCCc---------cccccCCCCCChhHHHHHHHHHHHcCCeEEeecCC-CChHHHHHHHH
Q 020275 262 AIVV--YPNSGEVWDGR---------AKKWLPSKCLGDGKFESFATRWRDSGAKLIGGCCR-TTPSTIQAVSK 322 (328)
Q Consensus 262 pl~~--ypN~g~~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~G~~iiGGCCG-t~P~hI~al~~ 322 (328)
|+++ |.|--..|... .-+.+--..++.++..++.....+.|...|==|.- ++++-|+++++
T Consensus 93 Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~ 165 (271)
T 1ujp_A 93 PLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVR 165 (271)
T ss_dssp CEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHT
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHH
Confidence 9888 77720000000 00111011234566666777677778654433333 45566777654
No 475
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=28.86 E-value=1.6e+02 Score=27.78 Aligned_cols=51 Identities=10% Similarity=0.055 Sum_probs=29.5
Q ss_pred HHHHHHHHhhc------CCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHH-cCCeEE
Q 020275 249 ENLICYFKELT------KKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRD-SGAKLI 306 (328)
Q Consensus 249 ~~~l~~l~~~~------~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~ii 306 (328)
..+++.+++.. +.|+++.-+..+..++. .+.+.+++.++++.+.+ .|+.+|
T Consensus 225 ~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~-------~G~~~ed~~~la~~L~~~~Gvd~I 282 (419)
T 3l5a_A 225 LEVMRAVQEVIDKEAPDNFILGFRATPEETRGSD-------LGYTIDEFNQLIDWVMDVSNIQYL 282 (419)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTE-------EEECHHHHHHHHHHHHHHSCCCCE
T ss_pred HHHHHHHHHHHhhhcCCCeeEEEecccccccCCC-------CCCCHHHHHHHHHHHHhhcCCcEE
Confidence 34445555543 45888877654321110 01356788888888888 887443
No 476
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=28.49 E-value=2.3e+02 Score=26.02 Aligned_cols=71 Identities=17% Similarity=0.190 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhc--CCCeEEEecCCC-------HHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHH
Q 020275 157 KLKDFHRRRLQVLVES--GPDLLAFETIPN-------KLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLD 227 (328)
Q Consensus 157 e~~~~h~~qi~~l~~~--gvD~i~~ET~~~-------~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 227 (328)
.+.+..++..+...+. |+. |.+|+.+. +.....+.+.+++.+ .|-.+.+.++-......|.++.+.++
T Consensus 156 ~~~e~L~~l~~~A~~~g~gv~-l~lE~~~~~~~~~~~~~t~~~~~~ll~~v~--~~~~vgl~lD~gH~~~~g~d~~~~l~ 232 (393)
T 1xim_A 156 RYREALNLLAQYSEDRGYGLR-FAIEPKPNEPRGDILLPTAGHAIAFVQELE--RPELFGINPETGHEQMSNLNFTQGIA 232 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCCE-EEEECCSSSSSSEESSCSHHHHHHHHTTSS--SGGGEEECCBHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcE-EEEecCCCCCCCCCcCCCHHHHHHHHHHhC--CccceEEEEccCCccccCCCHHHHHH
Confidence 3444444444444444 674 56698761 122333445555544 44213343322223357888888887
Q ss_pred HHH
Q 020275 228 IIN 230 (328)
Q Consensus 228 ~~~ 230 (328)
.+.
T Consensus 233 ~~~ 235 (393)
T 1xim_A 233 QAL 235 (393)
T ss_dssp HHH
T ss_pred Hhh
Confidence 664
No 477
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=28.47 E-value=3.4e+02 Score=24.77 Aligned_cols=108 Identities=14% Similarity=0.131 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEecC----------CC------------HHH---HHHHHHHHHhc-CCCccEEEEEE
Q 020275 156 EKLKDFHRRRLQVLVESGPDLLAFETI----------PN------------KLE---AQALVELLEEE-NIQIPSWICFS 209 (328)
Q Consensus 156 ~e~~~~h~~qi~~l~~~gvD~i~~ET~----------~~------------~~E---~~a~~~~~~~~-~~~~pv~is~~ 209 (328)
+++.+.|.+.++...++|.|.|=+--- |. ... +..+++++++. +.+ |+.+-++
T Consensus 157 ~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~v~vrls 235 (364)
T 1vyr_A 157 PGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-RIGIRVS 235 (364)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-GEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence 445556666666678899999855210 11 112 34456666664 324 8998887
Q ss_pred ecCCCC-C-CCCCCHHHHHH---HHHhcCCceEEEECCCC----hhhhHHHHHHHHhhcCCeEEE
Q 020275 210 SVDGEN-A-PSGESFKECLD---IINKSGKVNAVGINCAP----PQFVENLICYFKELTKKAIVV 265 (328)
Q Consensus 210 ~~~~~~-l-~~G~~~~~~~~---~~~~~~~~~~iGvNC~~----p~~~~~~l~~l~~~~~~pl~~ 265 (328)
..+... + .++.++++++. .+.+ .+++.|-+-+.. |..-..+++.+++..+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~ 299 (364)
T 1vyr_A 236 PIGTFQNVDNGPNEEADALYLIEELAK-RGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIG 299 (364)
T ss_dssp CSSCBTTBCCCTTHHHHHHHHHHHHHH-TTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE
T ss_pred cccccccccCCCCCHHHHHHHHHHHHH-hCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEE
Confidence 643211 1 24556666544 3433 578888776521 222245677888888888765
No 478
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=28.44 E-value=2.8e+02 Score=25.12 Aligned_cols=38 Identities=11% Similarity=0.004 Sum_probs=28.0
Q ss_pred CCceEEEECCCC-hhhhHHHHHHHHhhc--CCeEEEEeCCC
Q 020275 233 GKVNAVGINCAP-PQFVENLICYFKELT--KKAIVVYPNSG 270 (328)
Q Consensus 233 ~~~~~iGvNC~~-p~~~~~~l~~l~~~~--~~pl~~ypN~g 270 (328)
.+..+|-+++.. +......++.+++.. +.+|.+-.|.+
T Consensus 160 ~Gf~~iKik~g~~~~~~~e~v~avr~a~g~~~~l~vDan~~ 200 (371)
T 2ps2_A 160 KGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGK 200 (371)
T ss_dssp TTCCEEEEECCSCHHHHHHHHHHHTTTCCTTCEEEEECTTB
T ss_pred hChheEEeecCCCHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 467788888864 566667778877765 46899999976
No 479
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=28.31 E-value=2.6e+02 Score=23.23 Aligned_cols=81 Identities=22% Similarity=0.245 Sum_probs=46.2
Q ss_pred HHHHHHHHhcCCCeEEEecCC----CHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEE
Q 020275 163 RRRLQVLVESGPDLLAFETIP----NKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAV 238 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~----~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i 238 (328)
.+.++.+.+.|+|.|.+-.+. ........++.+++.. +.|+++.-.+ .+++++-..+. .++++|
T Consensus 36 ~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~g~i---------~~~~~~~~~~~--~Gad~V 103 (253)
T 1h5y_A 36 VEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAV-SIPVLVGGGV---------RSLEDATTLFR--AGADKV 103 (253)
T ss_dssp HHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHC-SSCEEEESSC---------CSHHHHHHHHH--HTCSEE
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhc-CCCEEEECCC---------CCHHHHHHHHH--cCCCEE
Confidence 557888889999977664332 2222233344454443 6898864422 23555544443 268899
Q ss_pred EECCC---ChhhhHHHHHHH
Q 020275 239 GINCA---PPQFVENLICYF 255 (328)
Q Consensus 239 GvNC~---~p~~~~~~l~~l 255 (328)
.++.. .|+.+..+.+.+
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~ 123 (253)
T 1h5y_A 104 SVNTAAVRNPQLVALLAREF 123 (253)
T ss_dssp EESHHHHHCTHHHHHHHHHH
T ss_pred EEChHHhhCcHHHHHHHHHc
Confidence 98874 355455554443
No 480
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=28.12 E-value=1.8e+02 Score=26.88 Aligned_cols=93 Identities=11% Similarity=0.072 Sum_probs=57.9
Q ss_pred CHHHH----HHHHHHHHHHHHhcCCCeE-----EEecCCC--HHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCH
Q 020275 154 DLEKL----KDFHRRRLQVLVESGPDLL-----AFETIPN--KLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESF 222 (328)
Q Consensus 154 ~~~e~----~~~h~~qi~~l~~~gvD~i-----~~ET~~~--~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~ 222 (328)
..+.+ ..|-+..++.+.+ .|+++ +||.+.. +..++.+++.+++. +++|+.=+.+-|= |.+.
T Consensus 106 ~~~~~~~~~~~f~~~ivdal~~-~v~~vKvg~~lfea~G~~gi~~L~~~v~~lr~~--g~~VflDlK~~DI-----gnTv 177 (353)
T 2ffc_A 106 EKDEFFYFFNHFCFYIINETKE-YALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHL--NVPTILDIKMNDI-----GNTV 177 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGG-GCSEEEEEGGGGSTTTHHHHHHHHHHHHHHHHH--TCCEEEEEEECCC-----HHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhcc-ccceeeccHHHHHhcCHHHHHHHHHHHHHHHHc--CCcEEEEEecCch-----HHHH
Confidence 34566 6777777887753 45654 3343322 33455567778877 4899987776433 3445
Q ss_pred HHHHHHHHhcCCceEEEECCCC-hhhhHHHHHH
Q 020275 223 KECLDIINKSGKVNAVGINCAP-PQFVENLICY 254 (328)
Q Consensus 223 ~~~~~~~~~~~~~~~iGvNC~~-p~~~~~~l~~ 254 (328)
..+++.+-...+++++-|++.. .+-+.++++.
T Consensus 178 a~ya~a~~~~lgaD~vTVhp~~G~dsl~~a~~~ 210 (353)
T 2ffc_A 178 KHYRKFIFDYLRSDSCTANIYMGTQMLRDICLD 210 (353)
T ss_dssp HHHHHHHHTTSCCSEEEECCTTCSTTHHHHHBC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH
Confidence 5555555323589999999974 5677777743
No 481
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=27.94 E-value=1.4e+02 Score=26.80 Aligned_cols=45 Identities=11% Similarity=0.200 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCCCeEEEecCC-C--HHHHHHHHHHHHhcCCCccEEEEE
Q 020275 163 RRRLQVLVESGPDLLAFETIP-N--KLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~ET~~-~--~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
.+.++.+.++|.|.|++-|.. + .+.+..++..+|+.. ++|+++-|
T Consensus 56 ~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~-~lPvil~f 103 (286)
T 3vk5_A 56 VEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAAT-PLPVVLHF 103 (286)
T ss_dssp HHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHC-SSCEEEEC
T ss_pred HHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhC-CCCEEEEC
Confidence 446777788999999999542 2 456888899999843 69999756
No 482
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=27.94 E-value=74 Score=28.52 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
|.+++...+++|.+++ +| --.++.|++.+++++++.+ +++++.+
T Consensus 86 H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~v~~ 131 (318)
T 3oa2_A 86 HYPHIAAGLRLGCDVI-CEKPLVPTPEMLDQLAVIERETD--KRLYNIL 131 (318)
T ss_dssp HHHHHHHHHHTTCEEE-ECSSCCSCHHHHHHHHHHHHHHT--CCEEECC
T ss_pred HHHHHHHHHHCCCeEE-EECCCcCCHHHHHHHHHHHHHhC--CEEEEEE
Confidence 5555555555665533 35 2345666666666666553 4554444
No 483
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=27.87 E-value=81 Score=28.31 Aligned_cols=46 Identities=9% Similarity=0.034 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCcc--EEEEE
Q 020275 160 DFHRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIP--SWICF 208 (328)
Q Consensus 160 ~~h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~p--v~is~ 208 (328)
..|.+++...+++|.++| +| --.++.|++.+++++++.+ ++ +++.+
T Consensus 78 ~~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~~~v~~ 127 (337)
T 3ip3_A 78 SLNGKILLEALERKIHAF-VEKPIATTFEDLEKIRSVYQKVR--NEVFFTAMF 127 (337)
T ss_dssp HHHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--TTCCEEECC
T ss_pred chHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhC--CceEEEecc
Confidence 347778888888888754 57 3457788888888888775 55 44444
No 484
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=27.84 E-value=1.1e+02 Score=23.45 Aligned_cols=56 Identities=13% Similarity=0.092 Sum_probs=35.4
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCC
Q 020275 174 PDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAP 244 (328)
Q Consensus 174 vD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~ 244 (328)
+|+..+-+ ..+.+..+++.+.+.+. +-+|++- |..=+++++.+++ .++-.+| ||..
T Consensus 59 vDlavi~~--p~~~v~~~v~e~~~~g~-k~v~~~~----------G~~~~e~~~~a~~-~Girvv~-nC~g 114 (122)
T 3ff4_A 59 VDTVTLYI--NPQNQLSEYNYILSLKP-KRVIFNP----------GTENEELEEILSE-NGIEPVI-GCTL 114 (122)
T ss_dssp CCEEEECS--CHHHHGGGHHHHHHHCC-SEEEECT----------TCCCHHHHHHHHH-TTCEEEE-SCHH
T ss_pred CCEEEEEe--CHHHHHHHHHHHHhcCC-CEEEECC----------CCChHHHHHHHHH-cCCeEEC-CcCe
Confidence 89888754 34556666766666663 3366432 2222567777665 5788899 9974
No 485
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=27.84 E-value=1e+02 Score=27.28 Aligned_cols=46 Identities=22% Similarity=0.330 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 161 FHRRRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
.|.+.+..++++|..++ +|. -.+..|++.+++++++.+ +.+++.+.
T Consensus 77 ~h~~~~~~al~~G~~v~-~eKP~~~~~~~~~~l~~~a~~~g--~~~~~~~~ 124 (319)
T 1tlt_A 77 SHFDVVSTLLNAGVHVC-VDKPLAENLRDAERLVELAARKK--LTLMVGFN 124 (319)
T ss_dssp HHHHHHHHHHHTTCEEE-EESSSCSSHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred hHHHHHHHHHHcCCeEE-EeCCCCCCHHHHHHHHHHHHHcC--CeEEEeee
Confidence 36777777888898766 583 457899999999998764 66666553
No 486
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=27.76 E-value=32 Score=30.96 Aligned_cols=29 Identities=28% Similarity=0.358 Sum_probs=25.5
Q ss_pred cCCChHHHHHHHHHHHHhccceeecCC-cC
Q 020275 49 LIKQPHLVKRVHLEYLEAGADILVTSS-YQ 77 (328)
Q Consensus 49 ll~~Pe~V~~iH~~yl~AGAdiI~TnT-y~ 77 (328)
+++++|.|++.-+-=++||||.|.|.| |.
T Consensus 167 ~L~d~e~i~~A~~ia~eaGADfVKTSTGf~ 196 (281)
T 2a4a_A 167 ELKTEDLIIKTTLAVLNGNADFIKTSTGKV 196 (281)
T ss_dssp HHCSHHHHHHHHHHHHTTTCSEEECCCSCS
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 458889899999999999999999999 54
No 487
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=27.73 E-value=1.8e+02 Score=24.49 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=31.6
Q ss_pred HHHHHHHHhcCCCeEEEe-----cCCCHHHHHHHHHHHHhcCCCccEEEEEEecC
Q 020275 163 RRRLQVLVESGPDLLAFE-----TIPNKLEAQALVELLEEENIQIPSWICFSSVD 212 (328)
Q Consensus 163 ~~qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~ 212 (328)
.+.++.+.+.|+|++-+- ++|+.......++.+++.. +.|+-+-+-+.+
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~-~~~~~v~lmv~d 75 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT-KAYLDCHLMVTN 75 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-CSEEEEEEESSC
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc-CCcEEEEEEecC
Confidence 567888889999998665 5566322223444555543 467777777755
No 488
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=27.65 E-value=1.2e+02 Score=27.27 Aligned_cols=23 Identities=17% Similarity=0.473 Sum_probs=11.8
Q ss_pred HhcCCCeEEEecCCCHHHHHHHHH
Q 020275 170 VESGPDLLAFETIPNKLEAQALVE 193 (328)
Q Consensus 170 ~~~gvD~i~~ET~~~~~E~~a~~~ 193 (328)
++.|+|+|.+-++ ++++++.+++
T Consensus 225 ~~aGaD~I~ld~~-~~e~l~~~v~ 247 (296)
T 1qap_A 225 LKAGADIIMLDNF-NTDQMREAVK 247 (296)
T ss_dssp HHTTCSEEEESSC-CHHHHHHHHH
T ss_pred HHcCCCEEEECCC-CHHHHHHHHH
Confidence 3456666666553 4445444444
No 489
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=27.24 E-value=1.5e+02 Score=26.95 Aligned_cols=50 Identities=12% Similarity=0.029 Sum_probs=34.7
Q ss_pred HHHHHHHhcCCCeEEEecCCCH---HHHHHHHHHHHhcCCCccEEEEEEecCCCC
Q 020275 164 RRLQVLVESGPDLLAFETIPNK---LEAQALVELLEEENIQIPSWICFSSVDGEN 215 (328)
Q Consensus 164 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~~~~~~~~~~pv~is~~~~~~~~ 215 (328)
..++.+++.|++.|++|++.+- .++..+++.+.+. ++||+++-.|..+.-
T Consensus 226 ~~l~~~~~~g~~GiVl~~~G~Gn~p~~~~~~l~~a~~~--gi~VV~~Sr~~~G~v 278 (326)
T 1nns_A 226 LPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKT--GTAVVRSSRVPTGAT 278 (326)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSSSCB
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCCCc
Confidence 4677788889999999987652 4444445444444 499998888765543
No 490
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=26.91 E-value=24 Score=31.97 Aligned_cols=62 Identities=18% Similarity=0.164 Sum_probs=34.7
Q ss_pred HHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECC
Q 020275 165 RLQVLVESGPDLLAFETIPNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINC 242 (328)
Q Consensus 165 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC 242 (328)
.++.+.+.|+|.| .++-. ......++.+++...+.++++.. .++.++.+.+.. +++.|++|=
T Consensus 92 e~qil~aaGAD~I-d~s~~--~~~~~li~~i~~~~~g~~vvv~v-----------~~~~Ea~~a~~~--Gad~I~v~g 153 (297)
T 4adt_A 92 EAQILEELKVDML-DESEV--LTMADEYNHINKHKFKTPFVCGC-----------TNLGEALRRISE--GASMIRTKG 153 (297)
T ss_dssp HHHHHHHTTCSEE-EEETT--SCCSCSSCCCCGGGCSSCEEEEE-----------SSHHHHHHHHHH--TCSEEEECC
T ss_pred HHHHHHHcCCCEE-EcCCC--CCHHHHHHHHHhcCCCCeEEEEe-----------CCHHHHHHHHhC--CCCEEEECC
Confidence 4455567999999 33211 11111233334322257888754 245677776653 578899983
No 491
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=26.87 E-value=94 Score=28.74 Aligned_cols=45 Identities=16% Similarity=0.294 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 161 FHRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 161 ~h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
.|.+++...+++|..+| +| --.++.|++.+++++++.+ +.+++.+
T Consensus 108 ~H~~~~~~al~aGkhVl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 154 (412)
T 4gqa_A 108 LHYTMAMAAIAAGKHVY-CEKPLAVNEQQAQEMAQAARRAG--VKTMVAF 154 (412)
T ss_dssp GHHHHHHHHHHTTCEEE-EESCSCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHcCCCeE-eecCCcCCHHHHHHHHHHHHHhC--Ceeeecc
Confidence 37778888888887655 47 3457888888888877654 4444444
No 492
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=26.78 E-value=3.8e+02 Score=24.67 Aligned_cols=142 Identities=17% Similarity=0.095 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHhcCCCeEEEecCCCH--HHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHh-cCCc
Q 020275 159 KDFHRRRLQVLVESGPDLLAFETIPNK--LEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINK-SGKV 235 (328)
Q Consensus 159 ~~~h~~qi~~l~~~gvD~i~~ET~~~~--~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~-~~~~ 235 (328)
..+.+..++...+.|+-+.+=|....+ .++..-.+.+++...+.|++.++... .+..|-+++.+.+.++. ..+.
T Consensus 75 ~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap~~~~~anlg~~---ql~~~~~~~~~~~av~~~~a~a 151 (368)
T 3vkj_A 75 GRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMP---QLVKGYGLKEFQDAIQMIEADA 151 (368)
T ss_dssp HHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHHHCSSSCEEEEEEGG---GGGTTCCHHHHHHHHHHTTCSE
T ss_pred hHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHHhCcCcceecCcCee---ecCCCCCHHHHHHHHHHhcCCC
Confidence 344555666677789988865653221 12222223344433378999888642 22233556655544432 1355
Q ss_pred eEEEECCC----Ch--h-----hhHHHHHHHHhhcCCeEEEEeCCCCccCCccccccCCCCCChhHHHHHHHHHHHcCCe
Q 020275 236 NAVGINCA----PP--Q-----FVENLICYFKELTKKAIVVYPNSGEVWDGRAKKWLPSKCLGDGKFESFATRWRDSGAK 304 (328)
Q Consensus 236 ~~iGvNC~----~p--~-----~~~~~l~~l~~~~~~pl~~ypN~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 304 (328)
..|-+|=. +| + .....|+.+++.++.|++++--++ - +++ +.++.+.+.|+.
T Consensus 152 l~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~----------g----~s~----~~A~~l~~aGad 213 (368)
T 3vkj_A 152 IAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGN----------G----ISM----ETAKLLYSYGIK 213 (368)
T ss_dssp EEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSS----------C----CCH----HHHHHHHHTTCC
T ss_pred eEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCC----------C----CCH----HHHHHHHhCCCC
Confidence 56666632 12 1 256778888888889999963211 0 233 346678899984
Q ss_pred E--EeecCCCChHHHHHHH
Q 020275 305 L--IGGCCRTTPSTIQAVS 321 (328)
Q Consensus 305 i--iGGCCGt~P~hI~al~ 321 (328)
. |+|-.||+...|+..+
T Consensus 214 ~I~V~g~GGt~~~~iE~~R 232 (368)
T 3vkj_A 214 NFDTSGQGGTNWIAIEMIR 232 (368)
T ss_dssp EEECCCBTSBCHHHHHHHH
T ss_pred EEEEeCCCCCcccchhhhh
Confidence 4 4666777666555544
No 493
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=26.77 E-value=79 Score=28.84 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=33.8
Q ss_pred HHHHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
|.+++...+++|..+| +|- -.++.|++.+++++++.+ +.+++.+
T Consensus 80 H~~~~~~al~aGk~Vl-~EKPla~~~~e~~~l~~~a~~~g--~~~~v~~ 125 (364)
T 3e82_A 80 HAPLARLALNAGKHVV-VDKPFTLDMQEARELIALAEEKQ--RLLSVFH 125 (364)
T ss_dssp HHHHHHHHHHTTCEEE-ECSCSCSSHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHCCCcEE-EeCCCcCCHHHHHHHHHHHHHhC--CeEEEEe
Confidence 6778888888898755 486 678999999999988764 6666544
No 494
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.71 E-value=2e+02 Score=21.48 Aligned_cols=77 Identities=12% Similarity=0.097 Sum_probs=39.9
Q ss_pred HHHHhcCCCeEEEecC-CCHHHHHHHHHHHHhcCCCccEEEEEEecCCCCCCCCCCHHHHHHHHHhcCCceEEEECCCCh
Q 020275 167 QVLVESGPDLLAFETI-PNKLEAQALVELLEEENIQIPSWICFSSVDGENAPSGESFKECLDIINKSGKVNAVGINCAPP 245 (328)
Q Consensus 167 ~~l~~~gvD~i~~ET~-~~~~E~~a~~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~iGvNC~~p 245 (328)
+.+.+..+|++++... +.. +...+++.+++.....|+++-. +..+.......+. .++..+...=..+
T Consensus 60 ~~l~~~~~dlii~D~~l~~~-~g~~~~~~l~~~~~~~~ii~ls---------~~~~~~~~~~~~~--~g~~~~l~Kp~~~ 127 (150)
T 4e7p_A 60 QLLEKESVDIAILDVEMPVK-TGLEVLEWIRSEKLETKVVVVT---------TFKRAGYFERAVK--AGVDAYVLKERSI 127 (150)
T ss_dssp HHHTTSCCSEEEECSSCSSS-CHHHHHHHHHHTTCSCEEEEEE---------SCCCHHHHHHHHH--TTCSEEEETTSCH
T ss_pred HHhhccCCCEEEEeCCCCCC-cHHHHHHHHHHhCCCCeEEEEe---------CCCCHHHHHHHHH--CCCcEEEecCCCH
Confidence 3444566888888743 432 3344555566544456655332 1223334444443 3566666654455
Q ss_pred hhhHHHHHHH
Q 020275 246 QFVENLICYF 255 (328)
Q Consensus 246 ~~~~~~l~~l 255 (328)
+.+...|+.+
T Consensus 128 ~~l~~~i~~~ 137 (150)
T 4e7p_A 128 ADLMQTLHTV 137 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 495
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=26.71 E-value=1.8e+02 Score=28.84 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHHhcCC-CccEEEEE
Q 020275 153 VDLEKLKDFHRRRLQVLVESGPDLLAFETIPNKLEAQALVELLEEENI-QIPSWICF 208 (328)
Q Consensus 153 ~~~~e~~~~h~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~~~~~~~~-~~pv~is~ 208 (328)
++..+ +.-++..++.|+|++++=-+.+.++++.+.+++++.+. +.+++..+
T Consensus 171 ltekD-----~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakI 222 (587)
T 2e28_A 171 ITEKD-----RADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKI 222 (587)
T ss_dssp CCHHH-----HHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CCccc-----HHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEE
Confidence 56555 34466677899999999999999999999999988763 56676665
No 496
>1pqr_A Alpha-A-conotoxin EIVA; alpha-helix, two disulfide bonds, C-TERM amidation; HET: HYP; NMR {Synthetic} SCOP: j.30.1.3
Probab=26.61 E-value=18 Score=20.58 Aligned_cols=8 Identities=50% Similarity=1.468 Sum_probs=6.3
Q ss_pred ecCCCChH
Q 020275 308 GCCRTTPS 315 (328)
Q Consensus 308 GCCGt~P~ 315 (328)
||||.-|.
T Consensus 1 gccg~ypn 8 (31)
T 1pqr_A 1 GCCGPYPN 8 (31)
T ss_dssp CCCCSSSS
T ss_pred CCcCCCCC
Confidence 79998764
No 497
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=26.55 E-value=1e+02 Score=27.86 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCccEEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFE--TIPNKLEAQALVELLEEENIQIPSWICFS 209 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~~~~~~~~~~pv~is~~ 209 (328)
|.+.+..++++|..+ ++| .-.++.|++.+++++++.+ +.+++.+.
T Consensus 102 h~~~~~~al~aGk~V-l~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~~ 148 (350)
T 3rc1_A 102 HAEWIDRALRAGKHV-LAEKPLTTDRPQAERLFAVARERG--LLLMENFM 148 (350)
T ss_dssp HHHHHHHHHHTTCEE-EEESSSCSSHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred HHHHHHHHHHCCCcE-EEeCCCCCCHHHHHHHHHHHHHhC--CEEEEEec
Confidence 677888888889874 467 3458899999999888764 66666654
No 498
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=26.53 E-value=60 Score=29.73 Aligned_cols=44 Identities=18% Similarity=0.172 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCCCeEEEec--CCCHHHHHHHHHHHHhcCCCccEEEEE
Q 020275 162 HRRRLQVLVESGPDLLAFET--IPNKLEAQALVELLEEENIQIPSWICF 208 (328)
Q Consensus 162 h~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~~~~~~~~~~pv~is~ 208 (328)
|.+++..++++|..++ +|- -.++.|++.+++++++.+ +++++.+
T Consensus 96 h~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~--~~~~v~~ 141 (383)
T 3oqb_A 96 RPGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKG--VKHGTVQ 141 (383)
T ss_dssp SHHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 5778888888898866 684 568889998888888764 4444443
No 499
>4e8j_A Lincosamide resistance protein; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: MSE LN0; 1.82A {Staphylococcus haemolyticus} PDB: 4e8i_A* 4fo1_A*
Probab=26.39 E-value=1.1e+02 Score=25.17 Aligned_cols=67 Identities=18% Similarity=0.189 Sum_probs=38.3
Q ss_pred CCCcCcchHHHHHHHh---hcCCeEEEecchHHHHHHCCCCCCC---ccchhhhcCCChHHHHHHHHHHHHhccceeec
Q 020275 1 MGKENTTASSLDDLIE---KAGGCAVIDGGFATQLETHGASIND---PLWSALYLIKQPHLVKRVHLEYLEAGADILVT 73 (328)
Q Consensus 1 ~~~~~~~~~~~~~~l~---~~~~~lvlDGg~gt~L~~~G~~~~~---~lws~~~ll~~Pe~V~~iH~~yl~AGAdiI~T 73 (328)
|.||++++..+.+.++ +.+-...++||-+-.+.--.....+ .+|-. -++-+.+++ ..-+.|.++.++
T Consensus 1 ~~~~~~~~~d~~evl~~l~~~~v~~~i~GGwAvD~~~G~~tR~H~DiDi~v~---~~d~~~l~~---~L~~~Gf~~~~~ 73 (161)
T 4e8j_A 1 MKNNNVTEKELFYILDLFEHMKVTYWLDGGWGVDVLTGKQQREHRDIDIDFD---AQHTQKVIQ---KLEDIGYKIEVH 73 (161)
T ss_dssp ---CCCCHHHHHHHHHHHHHHTCCEEEEHHHHHHHHHTSCCSCCSEEEEEEE---GGGHHHHHH---HHHHTTCEEEEE
T ss_pred CCccccCHHHHHHHHHHHHhCCCcEEEEcHhhhhHhcCCCCCcCCCeEEeec---HHhHHHHHH---HHHHCCCEEeec
Confidence 8899999998777665 3556899999999987532211111 23421 233344444 455569865544
No 500
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=26.39 E-value=74 Score=28.35 Aligned_cols=49 Identities=14% Similarity=0.143 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcC--CCeEEEecC-----CCHHHHHHHHHHHHhcCCCccEEEE-EEec
Q 020275 161 FHRRRLQVLVESG--PDLLAFETI-----PNKLEAQALVELLEEENIQIPSWIC-FSSV 211 (328)
Q Consensus 161 ~h~~qi~~l~~~g--vD~i~~ET~-----~~~~E~~a~~~~~~~~~~~~pv~is-~~~~ 211 (328)
.+...++.|.+.| +|.|-+..- |+..+++.+++.+... ++|+||| +.+.
T Consensus 183 ~~~~~v~~l~~~G~~iDgIG~q~H~~~~~~~~~~~~~~l~~~a~~--g~pi~iTE~di~ 239 (302)
T 1nq6_A 183 AVYEMVKDFKQRGVPIDCVGFQSHFNSNSPVPSDFQANLQRFADL--GVDVQITELDIE 239 (302)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTT--TCEEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCCcceEEEEEeecCCCCCHHHHHHHHHHHHhc--CCcEEEeeCCCC
Confidence 3445677777666 699977422 3456777777777655 5899998 4443
Done!