BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020276
(328 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 20/193 (10%)
Query: 132 PLEEFINASNGYLVGDTCVFGAEVFVKETKKCTGECLSMKKLTSTSNYKYVWKIENFSKL 191
P +E + N LV D EV ET T E + K+ W I NFS+
Sbjct: 12 PEDEEMLVPNSDLV-DGPAQPMEVTQPETAASTVEN---QPAEDPPTLKFTWTIPNFSRQ 67
Query: 192 PDKIYESEVFVAGDQKWKILLFPKGLGVASGSHISMYLELTDSSTITGGSKIYVHFTLRI 251
+ + S+VFV G KW+IL+FPKG V H+SMYL+++D++++ G Y F+L +
Sbjct: 68 NTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSDAASLPYGWSRYAQFSLAV 124
Query: 252 RNQLVSKHYEKKAKCKYLKVSIVVFATGEWLNTSIALGGWSKFIELNYLKKAGNGFLVND 311
NQ+ +++ +K T N + G++ F+ L+ L G+LVND
Sbjct: 125 VNQIHTRYTVRK-------------ETQHQFNARESDWGFTSFMPLSELYDPSRGYLVND 171
Query: 312 VCIVEAEVPVLGI 324
+VEAEV V +
Sbjct: 172 TVLVEAEVAVRKV 184
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 19/156 (12%)
Query: 19 PPA-HFLLKIEAFSSLVENDVENYKSLEFDAGGYKWKLVVYPNGNKNENVKDHISVYLAM 77
PP F I FS +N ++Y + F GGYKW+++++P GN NV DH+S+YL +
Sbjct: 52 PPTLKFTWTIPNFSR--QNTRKHYSDV-FVVGGYKWRILIFPKGN---NV-DHLSMYLDV 104
Query: 78 VGTSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLKLEWGFDQFIPLEEFI 137
+SL GW Y F L V++Q + + ++ Q +F+ + +WGF F+PL E
Sbjct: 105 SDAASLPYGWSRYAQFSLAVVNQIHTRYTVRKET---QHQFNARESDWGFTSFMPLSELY 161
Query: 138 NASNGYLVGDTCVFGAEVFVK--------ETKKCTG 165
+ S GYLV DT + AEV V+ ++KK TG
Sbjct: 162 DPSRGYLVNDTVLVEAEVAVRKVLDYWSYDSKKETG 197
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 9 VAISRSISHVPPA-HFLLKIEAFSSLVENDVENYKSLEFDAGGYKWKLVVYPNGNKNENV 67
A+ PP+ F I F+ L N ++Y + F GGYKW+++++P GN NV
Sbjct: 41 TAVENPPPEDPPSLKFTWTIPMFTRL--NTRKHYSDV-FVVGGYKWRILIFPKGN---NV 94
Query: 68 KDHISVYLAMVGTSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLKLEWGF 127
DH+S+YL + ++L GW Y F L V++Q + + I ++ Q +F+ + +WGF
Sbjct: 95 -DHLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKET---QHQFNARESDWGF 150
Query: 128 DQFIPLEEFINASNGYLVGDTCVFGAEVFVK--------ETKKCTG 165
F+PL E + GYLV DT + AEV V+ ++KK TG
Sbjct: 151 TSFMPLSELYEPTRGYLVNDTVLIEAEVAVRKVLDYWSYDSKKETG 196
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 16/145 (11%)
Query: 180 KYVWKIENFSKLPDKIYESEVFVAGDQKWKILLFPKGLGVASGSHISMYLELTDSSTITG 239
K+ W I F++L + + S+VFV G KW+IL+FPKG V H+SMYL++ D++ +
Sbjct: 55 KFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVADAANLPY 111
Query: 240 GSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATGEWLNTSIALGGWSKFIELNY 299
G Y F+L + NQ+ +++ +K T N + G++ F+ L+
Sbjct: 112 GWSRYSQFSLAVVNQVNNRYSIRK-------------ETQHQFNARESDWGFTSFMPLSE 158
Query: 300 LKKAGNGFLVNDVCIVEAEVPVLGI 324
L + G+LVND ++EAEV V +
Sbjct: 159 LYEPTRGYLVNDTVLIEAEVAVRKV 183
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 180 KYVWKIENFSKLPDKIYESEVFVAGDQKWKILLFPKGLGVASGSHISMYLELTDSSTITG 239
K W IE FS + + +VF G KW IL++P+G V +H+S++L + +
Sbjct: 70 KNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVC--NHLSLFLCVAHHEKLLP 127
Query: 240 GSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATGEWLNTSIALGGWSKFIELNY 299
G + FT+ + N+ K ++ K +W GW KFIEL
Sbjct: 128 GWSHFAQFTIAVSNKDPKKSKHSDTLHRFWK------KEHDW--------GWKKFIELPK 173
Query: 300 LKKAGNGFLVNDVCI-VEAEVPVL 322
LK+ GF+ + C+ ++A+V V+
Sbjct: 174 LKE---GFIDDSGCLTIKAQVQVI 194
Score = 48.5 bits (114), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 27 IEAFSSLVENDVENYKSLEFDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLG 86
IE FS + + ++ + F+ GGYKW +++YP G +V +H+S++L + L G
Sbjct: 75 IEKFSDINKREL---RGDVFEVGGYKWYILIYPQGC---DVCNHLSLFLCVAHHEKLLPG 128
Query: 87 WEVYVIFRLFV--LDQKKDEFLILQDAMGKQRRFHGLKLEWGFDQFIPL----EEFINAS 140
W + F + V D KK + D + RF + +WG+ +FI L E FI+ S
Sbjct: 129 WSHFAQFTIAVSNKDPKKSKH---SDTL---HRFWKKEHDWGWKKFIELPKLKEGFIDDS 182
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 39/299 (13%)
Query: 24 LLKIEAFSSLVENDVENYKSLEFDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVG--TS 81
++ I FS N + + S F G W+ Y NG K+ + +S++++ +
Sbjct: 1029 IISINNFS----NRKDQFYSPIFSLIGSNWRCKFYSNG-KDASTSGKLSIFISNCDLLNN 1083
Query: 82 SLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLKLEWGFDQFIPLEEFINASN 141
+ E + ++L +++QK I + + F + G+ FI L +N +N
Sbjct: 1084 PFTIFLEKSISYKLTLINQKNPNESIQKSS---SHTFSIKEFNHGYGSFIGLFSLLNPNN 1140
Query: 142 GYLVGDTCVFGAEVFVKETKKCTGECLSM-KKLTSTSNYKYVWKIENFSKLPDKIYESEV 200
G+LV +T + V+ T ++ K N + + + SK + + S +
Sbjct: 1141 GFLVNNT------IKVRIDAAPTSPLVNTYDKYNIGLNQAFSYSVPMMSKKSEP-FISPI 1193
Query: 201 FVAGDQKWKILLFPKGLGVASGSHISMYLELTDSSTITGGSKIYVHFTLRIRNQLVSKHY 260
F++ +KW I ++P +G S +++S++LE D VHF+L +L+S+ Y
Sbjct: 1194 FMSCGRKWIIKIYP--MGQPSSNYMSVFLEYRDEGEEN------VHFSL----ELISQLY 1241
Query: 261 EKKAKCKYLKVSIVVFATGEWLNTSIALGGWSKFIELNYLKKAGNGFLVNDVCIVEAEV 319
+++ + + N+ G+ KFI ++ L GFLVND I+ +
Sbjct: 1242 PEQS---------IKYWVQYRFNSKSNSFGYPKFIGVSTLMDPDMGFLVNDTIILNVSI 1291
Score = 38.1 bits (87), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 28 EAFS---SLVENDVENYKSLEFDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGTSSLG 84
+AFS ++ E + S F + G KW + +YP G + N ++SV+L
Sbjct: 1173 QAFSYSVPMMSKKSEPFISPIFMSCGRKWIIKIYPMGQPSSN---YMSVFLEYRDEGEEN 1229
Query: 85 LGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLKLEWGFDQFIPLEEFINASNGYL 144
+ + + +I +L+ ++ ++ + Q RF+ +G+ +FI + ++ G+L
Sbjct: 1230 VHFSLELISQLY--PEQSIKYWV-------QYRFNSKSNSFGYPKFIGVSTLMDPDMGFL 1280
Query: 145 VGDTCVFGAEVF-VKETKKCTG 165
V DT + + +K KK G
Sbjct: 1281 VNDTIILNVSILQLKPIKKSFG 1302
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 22 HFLLKIEAFSSLVENDVENYKSLEFDAG---GYKWKLVVYPNGNKNENVKDHISVYLAMV 78
+++ I FS E E KS F AG KW L + P G +E +D++S+YL +V
Sbjct: 97 NYMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKG-LDEESRDYLSLYLLLV 155
Query: 79 GTSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFI 137
+ EV F+ +L+ K++E AM QR + ++ +WGF +FI + +
Sbjct: 156 QCNK----SEVRAKFKFSILNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLL 207
Query: 138 NASNGYLVGDTCVFGAEV-FVKETKKCTGE 166
+ +NG L GD EV V ET TG+
Sbjct: 208 DEANGLLPGDRLSIFCEVSVVAETVNVTGQ 237
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 23/151 (15%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F AG KW + + PKGL S ++S+YL L
Sbjct: 96 FNYMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGLDEESRDYLSLYLLLV 155
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATGEWLNTSIALGGWS 292
+ S++ F I N +K E KA V +W G+
Sbjct: 156 QCNK----SEVRAKFKFSILN---AKREETKAMESQRAYRFV--QGKDW--------GFK 198
Query: 293 KFIELNYLKKAGNGFLVNDVCIVEAEVPVLG 323
KFI ++L NG L D + EV V+
Sbjct: 199 KFIRRDFLLDEANGLLPGDRLSIFCEVSVVA 229
>sp|Q54NN4|Y8514_DICDI TNF receptor-associated factor family protein DDB_G0285149
OS=Dictyostelium discoideum GN=DDB_G0285149 PE=3 SV=1
Length = 427
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 31/170 (18%)
Query: 162 KCTGECLSMKKLTSTSNYKYVWKIENFSK----LPD------KIYESEVFVAGDQKWKIL 211
KC+ E L K+LT+ + Y W IEN+ + +P+ K +F +K+ +
Sbjct: 269 KCSHETLE-KRLTNINKYSNQWVIENWMQKVIDIPNDEVTSTKRVSCPMFYFNSRKYNVS 327
Query: 212 LFPKGLGVASGSHISMYLELTDSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKV 271
FP G A+ +IS+YL L ++S I + F+ I N +K KK K Y +
Sbjct: 328 CFPNGFTPANKDYISLYLHLHEAS-----PNINIKFSFEIVNSDPTKSI-KKEKNSYFQN 381
Query: 272 SIVVFATGEWLNTSIALGGWSKFIELNYLKKAGNGFLVNDVCIVEAEVPV 321
+ GW KF E + G GF+V + ++ E+ +
Sbjct: 382 DKGI--------------GWEKFAECKTINTLGEGFVVGNKLTIKFEIEI 417
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 173 LTSTSNYKYVWKIENFSKLPDKIYESEVFVAGDQKWKILLFPKGLGVASGSHISMYLE 230
L ++ Y W ++NFS L DK Y S +F AG W+I+LFPKG + S++LE
Sbjct: 46 LEEAAHASYSWVVKNFSTLEDKTY-SPLFKAGHTTWRIVLFPKGCN--QTEYASVFLE 100
>sp|Q1EBV6|BPM5_ARATH BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis
thaliana GN=BPM5 PE=1 SV=1
Length = 410
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 46 FDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLGWEVYVIFRLFVLDQ 100
F GGY+W + YP+G E+ ++SV++A+ G EV +F L ++DQ
Sbjct: 55 FSVGGYQWGIFFYPDGKNPEDNSSYVSVFIALASE-----GTEVRALFELALVDQ 104
>sp|Q9SRV1|BPM4_ARATH BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis
thaliana GN=BPM4 PE=1 SV=1
Length = 465
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 46 FDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLGWEVYVIFRLFVLDQ 100
F GGY+W + YP+G E+ ++SV++A+ G +V +F L +LDQ
Sbjct: 73 FTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASD-----GTDVRALFELSLLDQ 122
>sp|A1L4W5|BPM6_ARATH BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis
thaliana GN=BPM6 PE=1 SV=1
Length = 415
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 4 DFVDQVAISRSISHVPPAHFLLKIEAFSSLVENDV-ENYKSLEFDAGGYKWKLVVYPNGN 62
D ++ SRS++ I+ +S V ++ S F GGY+W + VYP+G
Sbjct: 19 DQIESPTSSRSVTQTTNGSHQFVIQGYSLAKGIGVGKHIASDNFSVGGYQWTIFVYPDGK 78
Query: 63 KNENVKDHISVYLAMVGTSSLGLGWEVYVIFRLFVLDQ 100
E+ ++SV++ + + EV +F L ++DQ
Sbjct: 79 NPEDNSSYVSVFIVLASECT-----EVRALFELSLVDQ 111
>sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis
thaliana GN=BPM2 PE=1 SV=1
Length = 406
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 46 FDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLGWEVYVIFRLFVLDQKKDEF 105
F GGY W + YP+G E+ ++S+++A+ G +V +F L ++DQ +E
Sbjct: 59 FMVGGYSWAIYFYPDGKSPEDNSVYVSLFIALASE-----GADVRALFELTLVDQSGNER 113
Query: 106 LILQDAMGKQRRFHGLKLE-----WGFDQFIPLEEFINAS-----NGYLVGDTCVFGAEV 155
+ G+ L+ WG+ +F + +S NG LV C G
Sbjct: 114 HKVHSHFGRTLESGPYTLKYRGSMWGYKRFFK-RSLLESSDYLKDNGLLV--RCCVGVVK 170
Query: 156 FVKETKKC 163
E +C
Sbjct: 171 SRTEGPRC 178
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 173 LTSTSNYKYVWKIENFSKLPDK---IYESEVFVAGDQKWKILLFPKGLGVASGSHISMYL 229
++ +K VW I+NFSK + + S V G + + L+P G S S +S+YL
Sbjct: 298 ISKQEKFKSVWDIKNFSKRQFQKGFYFSSPVITVGHHSFHLWLYPNGETSPSNS-LSLYL 356
Query: 230 ELTDSSTITGGSKIYVHFTLRIRNQ 254
+T G K +V+F++ I+N
Sbjct: 357 ------VLTKGEKTFVNFSISIKNH 375
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2
Length = 829
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F AG KW L V P G +E KD++S+YL +V
Sbjct: 489 YMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKG-LDEESKDYLSLYLLLVS 547
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
+ EV F+ +L+ K++E AM QR + ++ +WGF +FI + ++
Sbjct: 548 CNK----SEVRAKFKFSILNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 599
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 600 EANGLLPEDKLTIFCEVSV 618
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F AG KW + + PKGL S ++S+YL
Sbjct: 487 FSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 543
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 544 -LLVSCNKSEVRAKFKFSILN---AKREETKA---MESQRAYRFVQGKDW--------GF 588
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L D + EV V+ S
Sbjct: 589 KKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADS 622
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis
thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 46 FDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLGWEVYVIFRLFVLDQ 100
F GGY W + YP+G E+ +IS+++A+ S+ ++ +F L ++DQ
Sbjct: 51 FSVGGYDWAIYFYPDGKNPEDQSSYISLFIALASDSN-----DIRALFELTLMDQ 100
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=3
Length = 392
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G +E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K++E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSLLNDKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F + N K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSLLN---DKREETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1
Length = 392
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G +E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K++E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F + N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSLLN---AKREETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1
Length = 392
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G +E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K++E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F + N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSLLN---AKREETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q86KX6|Y2348_DICDI TNF receptor-associated factor family protein DDB_G0272348
OS=Dictyostelium discoideum GN=DDB_G0272348 PE=3 SV=2
Length = 595
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 23/146 (15%)
Query: 179 YKYVWKIENFSK-----LPDKIYESEVFVAGDQKWKILLFPKGLGVASGSHISMYLELTD 233
YK W I N+S+ + +S +F G+ + + FP G + I +Y D
Sbjct: 457 YKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDD 516
Query: 234 SSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATGEWLNTSIALGGWSK 293
S I Y+H + NQ+ + YEK+ KY + N S G S+
Sbjct: 517 KSIIVN---YYIHL---VNNQISDEVYEKRGCQKY-----------DSENGSAGYGS-SQ 558
Query: 294 FIELNYLKKAGNGFLVNDVCIVEAEV 319
FI+ L NGFL+ND +E E+
Sbjct: 559 FIKRADLLNDANGFLINDSITIEIEI 584
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 52 KWKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLGWEVYVIFRL-----FVLDQKKDEFL 106
KW + Y + KD+I L +G S+ L W + +L F+ + D+ +
Sbjct: 460 KWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSI 519
Query: 107 I-----------LQDAMGKQRRFHGLKLE-----WGFDQFIPLEEFINASNGYLVGDTCV 150
I + D + ++R E +G QFI + +N +NG+L+ D+
Sbjct: 520 IVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSIT 579
Query: 151 FGAEVFVKE 159
E+F E
Sbjct: 580 IEIEIFATE 588
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 178 NYKYVWKIENFS-KLPD----KIYESEVFVAGDQKWKILLFPK-GLGVASGSHISMYLEL 231
NY+ W I N+S KL D K ES F+ G+ K+KI +P GL S +S+YL
Sbjct: 311 NYQNKWVITNWSQKLQDYPKPKSIESPEFMVGNLKFKIQFYPNGGLSDESKDFLSIYLYK 370
Query: 232 TDSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATGEWLNTSIALGGW 291
D T SK+ F +L++K + + K L + + +W GW
Sbjct: 371 FDDQT---PSKVQFSF------ELLNKDFTRNRK---LASTNIFHTENKW--------GW 410
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGISK 326
FI N L GF++ + + + +L K
Sbjct: 411 RSFIN-NSLVTTQTGFVIQNSVTLNINIEILPEEK 444
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 42 KSLEFDAGGYKWKLVVYPNGNKNENVKDHISVYL 75
+S EF G K+K+ YPNG ++ KD +S+YL
Sbjct: 335 ESPEFMVGNLKFKIQFYPNGGLSDESKDFLSIYL 368
>sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2
Length = 392
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E +S F +G KW L V P G +E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K++E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F + N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSLLN---AKREETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis
thaliana GN=BPM1 PE=1 SV=1
Length = 407
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 46 FDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLGWEVYVIFRLFVLDQ 100
F GGY W + YP+G E+ ++S+++A+ G +V +F L ++DQ
Sbjct: 60 FMVGGYSWAIYFYPDGKSPEDNSSYVSLFIALASE-----GADVRALFELTLVDQ 109
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K +E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSILN---AKGEETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K +E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSILN---AKGEETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K +E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSILN---AKGEETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K +E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSILN---AKGEETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K +E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSILN---AKGEETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K +E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSILN---AKGEETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K +E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSILN---AKGEETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|P34371|BAT42_CAEEL BTB and MATH domain-containing protein 42 OS=Caenorhabditis elegans
GN=bath-42 PE=1 SV=1
Length = 410
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 26 KIEAFSSLVE--NDVENYKSLEF---DAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGT 80
KIE F L++ + N S F DA W+L VYPNG ++E+V +++S +L VG
Sbjct: 51 KIEQFEKLMKLIKNGSNLISRMFSVPDAPTVCWELHVYPNGKRDEDV-NNVSFFLRQVG- 108
Query: 81 SSLGLGWE-VYVIFRLFVLDQKKDEFLILQDA 111
L G E + F+++ LD + +D
Sbjct: 109 --LARGEEPIMTEFQIYALDANNQRVSVCRDT 138
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G E+ L +
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
S EV F+ +L+ K +E AM QR + ++ +WGF +FI + ++
Sbjct: 94 PKS-----EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEVFV 157
+NG L D EV V
Sbjct: 145 EANGLLPDDKLTLFCEVSV 163
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 179 YKYVWKIENFSKLPDKIYE---SEVFVAGDQ---KWKILLFPKGLGVASGSHISMYLELT 232
+ Y+W I NFS +++ E S F +G KW + + PKGL S ++S+YL
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 233 DSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATG-EWLNTSIALGGW 291
S++ F I N +K E KA F G +W G+
Sbjct: 89 -LLVSCPKSEVRAKFKFSILN---AKGEETKA---MESQRAYRFVQGKDW--------GF 133
Query: 292 SKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGIS 325
KFI ++L NG L +D + EV V+ S
Sbjct: 134 KKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis elegans
GN=usp-7 PE=2 SV=1
Length = 1135
Score = 38.5 bits (88), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 118 FHGLKLEWGFDQFIPLEEFINASNGYLVGDT----CVFGAEV-----FVKETKKCTGECL 168
FH +++WGF + + N +GY+V DT C F A+V ++ ++K+ TG C+
Sbjct: 135 FHNTEVDWGFSNYDQYDTLCNPKDGYVVNDTIKLRCRFTADVPTGANYMWDSKRHTG-CI 193
Query: 169 SMKKLTST 176
++ +T
Sbjct: 194 GLRNQGAT 201
>sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1
Length = 392
Score = 38.1 bits (87), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 23 FLLKIEAFSSLVENDVENYKSLEFDAGG---YKWKLVVYPNGNKNENVKDHISVYLAMVG 79
++ I FS E E KS F +G KW L V P G +E+ KD++S+YL +V
Sbjct: 34 YMWTINNFSFCREETGEVLKSSSFSSGPNDKLKWCLRVNPKGLDDES-KDYLSLYLLLVS 92
Query: 80 TSSLGLGWEVYVIFRLFVLDQKKDEFLILQDAMGKQRRFHGLK-LEWGFDQFIPLEEFIN 138
EV F+ +L+ K +E AM QR + ++ +WGF ++I + ++
Sbjct: 93 CPKN----EVRAKFKFSLLNSKNEE----TKAMESQRAYRFVQGKDWGFKKYIRRDFLLD 144
Query: 139 ASNGYLVGDTCVFGAEV-FVKETKKCTGEC----LSMKKLTSTSNYKYVWKIENFS 189
+NG L D EV V+++ +G+ L + + + Y+W+ F+
Sbjct: 145 EANGLLPDDKLTLYCEVSVVQDSINISGQSSSNNLKVPECRLAEDMGYLWENRRFT 200
>sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2
PE=2 SV=2
Length = 364
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 53 WKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLGWEVYVIFRLFVLDQKKDEFLILQ--D 110
W L V+PNG +E KD++SVYL +V +V F ++ + + +++ Q +
Sbjct: 55 WCLRVHPNGF-DEESKDYLSVYLVLVNCPKR----QVRAKFEFWIKNSQGEKYQYTQSLN 109
Query: 111 AMGKQRRFHGLKLEWGFDQFIPLEEFINASNGYLVGDTCVFGAEVFV 157
QR K WGF +FI + ++ N L D +V +
Sbjct: 110 VPSFQR-----KQNWGFSKFILRDSLLSHRNWLLPKDKLTLCCKVSI 151
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 181 YVWKIENFSKLPDKIYESEVFVAGDQKWKILLFPKGLGVASGSHISMYLE 230
+ W I ++++L + Y S F GD +W ILLFP+G +++YLE
Sbjct: 42 FTWNIPDWNELTNPKYNSPRFRIGDFEWDILLFPQG---NHNKGVAVYLE 88
>sp|P41886|BAT41_CAEEL BTB and MATH domain-containing protein 41 OS=Caenorhabditis elegans
GN=bath-41 PE=1 SV=1
Length = 418
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 26/162 (16%)
Query: 167 CLSMKKLTSTSNYKYVWKIENFS-----KLPDKIYESEVFVAGDQKWKILLFPKGLGVAS 221
C ++ S +NY W +E F+ P + + F GD ++ + LFP G +
Sbjct: 37 CRTVMNERSFTNY---WSVERFTVQLELHNPAEFMLAPKFGDGDYEFVMKLFPNGKDEET 93
Query: 222 GSHISMYLELTDSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATGEW 281
++S++L + + LR R + + C K + + +G
Sbjct: 94 AGYLSLFLLINKCP----------NPRLRFRVSFTVETADGPRSCHLNKNLVTINRSG-- 141
Query: 282 LNTSIALGGWSKFIELNYLKKAGNGFLVNDVCIVEAEVPVLG 323
+ SKF L+ L+ A N ++ ND+ + E+ + G
Sbjct: 142 ------IVTASKFFSLDILRSAMNVYIPNDILTIGCELTIFG 177
>sp|O94972|TRI37_HUMAN E3 ubiquitin-protein ligase TRIM37 OS=Homo sapiens GN=TRIM37 PE=1
SV=2
Length = 964
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 185 IENFSKL---PDKIYESEVFVAGDQKWKILLFPKGLGVASGSHISMYLELT 232
+ENFS L D +Y + V+G W++ ++P G GV G ++S++LEL+
Sbjct: 283 LENFSTLRQRADPVYSPPLQVSG-LCWRLKVYPDGNGVVRGYYLSVFLELS 332
>sp|Q6PCX9|TRI37_MOUSE E3 ubiquitin-protein ligase TRIM37 OS=Mus musculus GN=Trim37 PE=2
SV=1
Length = 961
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 185 IENFSKL---PDKIYESEVFVAGDQKWKILLFPKGLGVASGSHISMYLELT 232
+ENFS L D +Y + V+G W++ ++P G GV G ++S++LEL+
Sbjct: 283 LENFSTLRQRADPVYSPPLQVSG-LCWRLKVYPDGNGVVRGYYLSVFLELS 332
>sp|Q86K46|Y7243_DICDI TNF receptor-associated factor family protein DDB_G0277243
OS=Dictyostelium discoideum GN=DDB_G0277243 PE=3 SV=1
Length = 423
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 171 KKLTSTSNYKYVWKIENFSK----LP-DKIYESEVFVAGDQKWKILLFPKGLGVASGSHI 225
K++ TS YK W IEN+S+ P ++ +S F G + + + L+P G + +
Sbjct: 280 KRVEITSRYKGNWTIENWSQKLTHYPNNERLKSPYFCIGSKSFYVGLYPNGFNQTNAGFM 339
Query: 226 SMYLELTDSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATGEWLNTS 285
S++L L + + T + + F L + S +EK K T
Sbjct: 340 SIFLHLYEKPS-TSTTVVRFSFELLHSDPTKSLKFEKSNK-----------------YTE 381
Query: 286 IALGGWSKFIELNYLKKAGNGFLVNDVCIVEAEVPVLGISKAL 328
G+S+FI++ K N F+++ + +V V+ S +L
Sbjct: 382 NKGSGFSQFIDI----KMINNFIIDGKLTINIDVEVIPPSSSL 420
>sp|Q54FG0|Y0883_DICDI TNF receptor-associated factor family protein DDB_G0290883
OS=Dictyostelium discoideum GN=DDB_G0290883 PE=3 SV=1
Length = 460
Score = 35.0 bits (79), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 27/148 (18%)
Query: 171 KKLTSTSN-YKYVWKIENFS-----KLPDKIYESEVFVAGDQKWKILLFPKGLGVASGSH 224
K L SN Y+ W I N+S KL K S + + +++ ++PKG + +
Sbjct: 312 KALDICSNGYRNKWIISNYSSLAKSKLNCKSLSSPILLILSHHFQVCVYPKG--DENKEY 369
Query: 225 ISMYLELTDSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVF-ATGEWLN 283
IS+YL + + I + + V ++ + N L K+K +V +VF + EW
Sbjct: 370 ISLYLRVNN---IEEPNSLKVEYSFTLVNVL------DKSKSITKRVDKIVFISPKEW-- 418
Query: 284 TSIALGGWSKFIELNYLKKAGNGFLVND 311
GW KF+ L+ L NG+L ND
Sbjct: 419 ------GWGKFL-LSDLINKENGWLSND 439
>sp|Q6YCH1|TDPZ5_MOUSE TD and POZ domain-containing protein 5 OS=Mus musculus GN=Tdpoz5
PE=2 SV=1
Length = 340
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 175 STSNYKYVWKIENFSKLPDKIYE---SEVFV--AGDQ-KWKILLFPKGLGVASGSHISMY 228
S + YVW I NFS D I S VF A D+ W ++ P G+ S ++S++
Sbjct: 16 SVKEFCYVWTIRNFSPCIDGIRRTITSPVFSLEANDEVTWCLIAHPNGVDEVSECYMSVF 75
Query: 229 LEL 231
LEL
Sbjct: 76 LEL 78
>sp|Q717B3|TDPZ1_MOUSE TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1
PE=2 SV=2
Length = 365
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 23/156 (14%)
Query: 174 TSTSNYKYVWKIENFSKLPDKIYE---SEVFVAGDQK---WKILLFPKGLGVASGSHISM 227
+S + Y W I NFS I S VF + + K W + ++PKG S ++S+
Sbjct: 15 SSVEKFCYKWTISNFSFCMGGIQRRITSPVFSSEENKEVAWCLRVYPKGADKESKDYLSV 74
Query: 228 YLELTDSSTITGGSKIYVHFTLRIRNQLVSKHYEKKAKCKYLKVSIVVFATGEWLNTSIA 287
YL L S ++ F I N K+ + K+ + F T E
Sbjct: 75 YLVLLSHLQ----SPVWAKFKFWIINSQGEKYQKTKSPI------VECFLTYEQ------ 118
Query: 288 LGGWSKFIELNYLKKAGNGFLVNDVCIVEAEVPVLG 323
G+ KF+ + L N L D + +V +LG
Sbjct: 119 -SGFKKFLPRDLLLSHRNCLLPEDQLTICCKVTILG 153
>sp|Q60MK8|UBP7_CAEBR Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis briggsae
GN=usp-7 PE=3 SV=1
Length = 1129
Score = 34.7 bits (78), Expect = 1.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 118 FHGLKLEWGFDQFIPLEEFINASNGYLVGDT----CVFGAEV-----FVKETKKCTGECL 168
FH +++WGF + + + +GY++ D C F A+V ++ ++KK TG C+
Sbjct: 132 FHNTEVDWGFSNYDQYDTLTSPKDGYVIDDVIRLRCRFTADVPTGANYMWDSKKHTG-CI 190
Query: 169 SMKKLTST 176
++ +T
Sbjct: 191 GLRNQGAT 198
>sp|Q54FB9|Y0971_DICDI TNF receptor-associated factor family protein DDB_G0290971
OS=Dictyostelium discoideum GN=DDB_G0290971 PE=3 SV=1
Length = 445
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 39 ENYKSLEFDAGGYKWKLVVYPNGNKNENVKDHISVYLAMVGTSSLGLGWEVYVIFRLFVL 98
E ++ D G K+KL +YPNG +E+ K +IS YL V + + +V F
Sbjct: 332 EGISTVPLDVGNNKFKLTLYPNG-YDESNKGNISAYLYRVSINEPAV--KVSFTFVFNNQ 388
Query: 99 DQKKDEFLILQDAMGKQRRFHGLKLE-WGFDQFIPLEEFINASNGYLVG-DTCVFGAEVF 156
D +K+ +Q+ F+G WG+ + + + ++++NG+L D V G +
Sbjct: 389 DSRKNRTYRIQEYT-----FNGGATSGWGYPKTLKTVD-VDSANGWLTDEDKLVIGLRIQ 442
Query: 157 V 157
V
Sbjct: 443 V 443
>sp|Q93PU4|TTGH_PSEPU Toluene efflux pump membrane transporter TtgH OS=Pseudomonas putida
GN=ttgH PE=2 SV=2
Length = 1049
Score = 33.5 bits (75), Expect = 2.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 271 VSIVVFATGEWLNTSIALGGWSKFIELNYLKKAGNGFLVNDVCIVEAEV 319
V FATGEW+N S L + LN L + G+ D I AE+
Sbjct: 797 VPFSAFATGEWVNGSPKLERYGGISSLNILGEPAPGYSTGDAMIAIAEI 845
>sp|O31100|SRPB_PSEPU Solvent-resistant pump membrane transporter SrpB OS=Pseudomonas
putida GN=srpB PE=2 SV=1
Length = 1049
Score = 33.5 bits (75), Expect = 2.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 271 VSIVVFATGEWLNTSIALGGWSKFIELNYLKKAGNGFLVNDVCIVEAEV 319
V FATGEW+N S L + LN L + G+ D I AE+
Sbjct: 797 VPFSAFATGEWVNGSPKLERYGGISSLNILGEPAPGYSTGDAMIAIAEI 845
>sp|O49624|FB242_ARATH Putative F-box protein At4g22180 OS=Arabidopsis thaliana
GN=At4g22180 PE=4 SV=3
Length = 402
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 16/72 (22%)
Query: 145 VGDTCVFGAEVFVKETKKC------TGECLSM-----KKLTSTSNYKYVWKIENFSK-LP 192
+G +CV V+ K+ KC T C M K STS YKY ++I +FS+ +P
Sbjct: 191 LGSSCV----VYSKKGDKCWNQIPETSNCHHMVYKDHKLYFSTSTYKYEFRIFDFSREIP 246
Query: 193 DKIYESEVFVAG 204
+I++ V + G
Sbjct: 247 QQIFQGYVIMQG 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,745,676
Number of Sequences: 539616
Number of extensions: 5156796
Number of successful extensions: 11159
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 11055
Number of HSP's gapped (non-prelim): 94
length of query: 328
length of database: 191,569,459
effective HSP length: 118
effective length of query: 210
effective length of database: 127,894,771
effective search space: 26857901910
effective search space used: 26857901910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)