Query 020277
Match_columns 328
No_of_seqs 452 out of 3120
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 14:27:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020277.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020277hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 4.8E-27 1.6E-31 221.0 28.6 229 73-310 19-248 (407)
2 2vou_A 2,6-dihydroxypyridine h 99.9 3.4E-23 1.2E-27 194.1 26.0 214 76-309 4-228 (397)
3 4hb9_A Similarities with proba 99.9 1.1E-23 3.8E-28 197.3 20.9 186 78-270 2-192 (412)
4 3alj_A 2-methyl-3-hydroxypyrid 99.9 1.1E-22 3.7E-27 189.5 25.9 213 76-308 10-230 (379)
5 2xdo_A TETX2 protein; tetracyc 99.9 2.7E-22 9.1E-27 188.1 25.1 223 75-310 24-253 (398)
6 2qa2_A CABE, polyketide oxygen 99.9 2.1E-22 7.3E-27 194.2 22.7 211 75-306 10-225 (499)
7 2qa1_A PGAE, polyketide oxygen 99.9 2.8E-22 9.6E-27 193.4 22.6 211 75-306 9-224 (500)
8 2x3n_A Probable FAD-dependent 99.9 5.1E-22 1.8E-26 186.1 21.1 213 77-306 6-228 (399)
9 3c96_A Flavin-containing monoo 99.9 3.1E-21 1.1E-25 181.5 25.5 218 76-307 3-240 (410)
10 1pn0_A Phenol 2-monooxygenase; 99.9 1.1E-20 3.9E-25 187.9 23.5 222 76-309 7-296 (665)
11 3i3l_A Alkylhalidase CMLS; fla 99.9 4.4E-20 1.5E-24 181.0 27.2 226 75-308 21-254 (591)
12 3e1t_A Halogenase; flavoprotei 99.9 1.8E-20 6.1E-25 181.4 24.1 223 76-308 6-238 (512)
13 3fmw_A Oxygenase; mithramycin, 99.9 1.5E-21 5E-26 191.0 16.3 216 76-308 48-270 (570)
14 3ihg_A RDME; flavoenzyme, anth 99.9 5.5E-20 1.9E-24 178.9 26.9 216 76-299 4-241 (535)
15 2r0c_A REBC; flavin adenine di 99.9 3.2E-20 1.1E-24 181.1 25.1 216 76-299 25-256 (549)
16 3nix_A Flavoprotein/dehydrogen 99.9 4.2E-20 1.4E-24 174.0 21.3 220 77-308 5-235 (421)
17 1k0i_A P-hydroxybenzoate hydro 99.9 5.9E-20 2E-24 171.7 21.9 216 77-308 2-227 (394)
18 2dkh_A 3-hydroxybenzoate hydro 99.8 1.3E-19 4.5E-24 179.7 22.8 220 76-308 31-276 (639)
19 3oz2_A Digeranylgeranylglycero 99.8 7.6E-19 2.6E-23 163.2 21.1 214 76-308 3-229 (397)
20 3atr_A Conserved archaeal prot 99.8 6.1E-19 2.1E-23 168.0 20.0 211 77-308 6-235 (453)
21 3cgv_A Geranylgeranyl reductas 99.8 5.3E-18 1.8E-22 158.1 21.6 213 77-309 4-230 (397)
22 2pyx_A Tryptophan halogenase; 99.7 2.3E-16 7.9E-21 153.0 23.0 217 76-301 6-295 (526)
23 2weu_A Tryptophan 5-halogenase 99.7 3.1E-16 1E-20 151.6 23.3 212 77-298 2-288 (511)
24 2aqj_A Tryptophan halogenase, 99.7 1.4E-15 4.7E-20 148.0 21.3 217 76-299 4-282 (538)
25 2e4g_A Tryptophan halogenase; 99.7 2.2E-15 7.4E-20 146.9 20.7 213 76-298 24-311 (550)
26 2gmh_A Electron transfer flavo 99.7 1.8E-14 6.1E-19 141.3 25.3 219 76-309 34-295 (584)
27 3k30_A Histamine dehydrogenase 99.7 1.8E-17 6.1E-22 165.8 3.0 103 9-111 320-425 (690)
28 3c4a_A Probable tryptophan hyd 99.6 1.3E-15 4.6E-20 141.6 13.3 193 78-305 1-204 (381)
29 1o94_A Tmadh, trimethylamine d 99.6 2.3E-16 7.7E-21 158.6 3.6 104 8-111 316-423 (729)
30 1ps9_A 2,4-dienoyl-COA reducta 99.6 6.6E-16 2.3E-20 154.0 3.3 102 8-111 305-407 (671)
31 2bry_A NEDD9 interacting prote 99.5 6.6E-14 2.3E-18 134.8 13.8 137 75-250 90-236 (497)
32 2oln_A NIKD protein; flavoprot 99.5 4E-12 1.4E-16 118.5 22.4 65 185-250 148-215 (397)
33 2gf3_A MSOX, monomeric sarcosi 99.5 2.6E-12 8.9E-17 119.2 20.3 220 77-303 3-267 (389)
34 3ps9_A TRNA 5-methylaminomethy 99.5 7.1E-12 2.4E-16 125.0 22.5 63 184-246 411-475 (676)
35 1yvv_A Amine oxidase, flavin-c 99.5 2.1E-12 7.3E-17 117.3 16.8 155 77-249 2-167 (336)
36 1y56_B Sarcosine oxidase; dehy 99.4 2E-12 6.8E-17 119.8 16.9 65 185-250 144-212 (382)
37 2gag_B Heterotetrameric sarcos 99.4 1.8E-11 6E-16 114.2 23.1 113 186-307 170-288 (405)
38 3nyc_A D-arginine dehydrogenas 99.4 1.1E-12 3.7E-17 121.3 14.5 65 185-250 149-216 (381)
39 1ryi_A Glycine oxidase; flavop 99.4 1.6E-12 5.5E-17 120.4 15.2 65 185-250 159-226 (382)
40 3v76_A Flavoprotein; structura 99.4 1E-12 3.5E-17 123.6 13.9 145 75-244 25-187 (417)
41 3pvc_A TRNA 5-methylaminomethy 99.4 1.8E-12 6E-17 129.6 16.3 63 184-246 406-471 (689)
42 2uzz_A N-methyl-L-tryptophan o 99.4 1.9E-11 6.5E-16 112.7 21.8 60 185-245 144-205 (372)
43 3dme_A Conserved exported prot 99.4 8.2E-12 2.8E-16 114.6 18.3 66 185-250 145-216 (369)
44 3da1_A Glycerol-3-phosphate de 99.4 4.2E-12 1.4E-16 123.9 17.1 66 185-250 165-239 (561)
45 3ihm_A Styrene monooxygenase A 99.4 1.8E-12 6.2E-17 122.5 13.6 205 76-310 21-237 (430)
46 3c4n_A Uncharacterized protein 99.4 2.3E-12 8E-17 120.7 12.0 65 185-250 167-244 (405)
47 2qcu_A Aerobic glycerol-3-phos 99.4 9E-11 3.1E-15 113.0 23.3 112 185-302 144-268 (501)
48 3dje_A Fructosyl amine: oxygen 99.4 1.8E-11 6.2E-16 115.6 17.8 62 185-246 156-223 (438)
49 2i0z_A NAD(FAD)-utilizing dehy 99.4 6.2E-12 2.1E-16 119.4 13.6 165 76-251 25-209 (447)
50 3nlc_A Uncharacterized protein 99.3 8.6E-12 2.9E-16 120.8 12.4 58 188-245 218-278 (549)
51 1qo8_A Flavocytochrome C3 fuma 99.3 3.1E-11 1E-15 118.0 16.2 169 76-250 120-318 (566)
52 1rp0_A ARA6, thiazole biosynth 99.3 6.5E-11 2.2E-15 105.5 15.7 137 76-249 38-196 (284)
53 1y0p_A Fumarate reductase flav 99.3 7E-11 2.4E-15 115.5 17.0 163 76-248 125-321 (571)
54 3axb_A Putative oxidoreductase 99.3 4.5E-11 1.5E-15 113.3 14.9 66 184-250 175-261 (448)
55 2gqf_A Hypothetical protein HI 99.2 3.7E-11 1.3E-15 112.4 12.0 142 77-244 4-168 (401)
56 1d4d_A Flavocytochrome C fumar 99.2 2.3E-10 8E-15 111.8 18.1 37 76-112 125-161 (572)
57 4a9w_A Monooxygenase; baeyer-v 99.2 1.7E-11 5.7E-16 111.9 9.4 128 77-246 3-134 (357)
58 3jsk_A Cypbp37 protein; octame 99.2 1.7E-10 5.8E-15 104.9 15.2 138 76-250 78-257 (344)
59 2gv8_A Monooxygenase; FMO, FAD 99.2 2.7E-11 9.3E-16 114.9 10.2 61 186-246 111-179 (447)
60 2cul_A Glucose-inhibited divis 99.2 1.4E-10 4.8E-15 100.2 13.6 125 76-250 2-131 (232)
61 2ywl_A Thioredoxin reductase r 99.2 7.5E-11 2.6E-15 97.6 11.4 112 78-250 2-116 (180)
62 3ab1_A Ferredoxin--NADP reduct 99.2 9.5E-11 3.3E-15 107.7 12.4 120 76-248 13-135 (360)
63 2zbw_A Thioredoxin reductase; 99.2 1.1E-10 3.6E-15 106.1 11.9 119 76-247 4-124 (335)
64 3ces_A MNMG, tRNA uridine 5-ca 99.2 1.8E-10 6.2E-15 112.8 14.1 154 76-249 27-186 (651)
65 1pj5_A N,N-dimethylglycine oxi 99.2 5.1E-10 1.8E-14 114.1 17.7 74 185-259 146-222 (830)
66 3fbs_A Oxidoreductase; structu 99.2 1.1E-10 3.7E-15 103.8 11.2 111 77-246 2-114 (297)
67 3cp8_A TRNA uridine 5-carboxym 99.2 3.2E-10 1.1E-14 110.9 14.9 151 76-247 20-177 (641)
68 2zxi_A TRNA uridine 5-carboxym 99.2 3.5E-10 1.2E-14 110.4 14.4 153 76-248 26-184 (637)
69 1w4x_A Phenylacetone monooxyge 99.2 9.2E-11 3.2E-15 114.0 10.1 136 76-247 15-157 (542)
70 2xve_A Flavin-containing monoo 99.1 1.4E-10 5E-15 110.5 11.0 149 78-247 3-169 (464)
71 4fk1_A Putative thioredoxin re 99.1 2.3E-10 7.9E-15 102.7 11.5 37 74-110 3-39 (304)
72 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 4.8E-10 1.6E-14 102.3 13.7 145 78-243 2-164 (342)
73 3gwf_A Cyclohexanone monooxyge 99.1 1.2E-10 4.2E-15 113.0 10.1 136 76-247 7-150 (540)
74 2rgh_A Alpha-glycerophosphate 99.1 8.5E-10 2.9E-14 107.8 15.8 65 186-250 184-256 (571)
75 4ap3_A Steroid monooxygenase; 99.1 1.7E-10 5.9E-15 112.1 10.5 136 76-247 20-162 (549)
76 3lzw_A Ferredoxin--NADP reduct 99.1 4.6E-10 1.6E-14 101.4 12.5 114 77-244 7-123 (332)
77 1kf6_A Fumarate reductase flav 99.1 2.1E-09 7.3E-14 105.5 17.1 61 190-250 134-203 (602)
78 3itj_A Thioredoxin reductase 1 99.1 2.1E-10 7.3E-15 103.9 9.2 120 74-246 19-144 (338)
79 2gjc_A Thiazole biosynthetic e 99.1 2.1E-09 7.1E-14 97.1 15.2 138 76-250 64-245 (326)
80 2q0l_A TRXR, thioredoxin reduc 99.1 1E-09 3.6E-14 98.4 13.1 112 78-247 2-117 (311)
81 3f8d_A Thioredoxin reductase ( 99.1 7.1E-10 2.4E-14 99.7 11.5 111 76-246 14-127 (323)
82 3uox_A Otemo; baeyer-villiger 99.1 3.3E-10 1.1E-14 110.0 9.5 137 76-247 8-150 (545)
83 3i6d_A Protoporphyrinogen oxid 99.1 4.1E-10 1.4E-14 106.8 9.8 56 191-246 236-291 (470)
84 4at0_A 3-ketosteroid-delta4-5a 99.0 6.8E-09 2.3E-13 100.1 18.0 37 76-112 40-76 (510)
85 2e5v_A L-aspartate oxidase; ar 99.0 7.6E-09 2.6E-13 98.8 16.8 60 189-249 118-181 (472)
86 3d1c_A Flavin-containing putat 99.0 2E-09 6.7E-14 98.9 12.0 137 77-245 4-144 (369)
87 1c0p_A D-amino acid oxidase; a 99.0 3.5E-09 1.2E-13 97.3 13.5 36 76-111 5-40 (363)
88 2q7v_A Thioredoxin reductase; 99.0 2.4E-09 8.1E-14 96.8 11.9 113 76-246 7-125 (325)
89 1chu_A Protein (L-aspartate ox 99.0 2.1E-09 7E-14 104.4 11.7 35 76-111 7-41 (540)
90 1vdc_A NTR, NADPH dependent th 99.0 8.9E-10 3E-14 99.8 8.1 118 76-247 7-127 (333)
91 3s5w_A L-ornithine 5-monooxyge 99.0 5.3E-09 1.8E-13 99.4 12.9 142 76-246 29-194 (463)
92 4a5l_A Thioredoxin reductase; 98.9 3.6E-09 1.2E-13 94.9 10.7 115 77-244 4-121 (314)
93 2h88_A Succinate dehydrogenase 98.9 2.8E-08 9.7E-13 97.7 17.9 36 76-111 17-52 (621)
94 3cty_A Thioredoxin reductase; 98.9 5.2E-09 1.8E-13 94.3 11.8 112 76-246 15-128 (319)
95 2wdq_A Succinate dehydrogenase 98.9 2E-08 6.7E-13 98.4 16.7 37 76-112 6-42 (588)
96 1trb_A Thioredoxin reductase; 98.9 2.5E-09 8.6E-14 96.2 9.3 112 76-246 4-118 (320)
97 1fl2_A Alkyl hydroperoxide red 98.9 3.1E-09 1.1E-13 95.3 9.8 111 78-246 2-117 (310)
98 4dgk_A Phytoene dehydrogenase; 98.9 5.1E-09 1.8E-13 100.4 11.8 60 190-250 221-284 (501)
99 2a87_A TRXR, TR, thioredoxin r 98.9 3E-09 1E-13 96.7 9.3 113 75-246 12-128 (335)
100 2ivd_A PPO, PPOX, protoporphyr 98.9 2.8E-09 9.7E-14 101.5 9.4 55 190-245 238-295 (478)
101 3nrn_A Uncharacterized protein 98.9 3.8E-09 1.3E-13 99.1 10.0 55 190-246 189-245 (421)
102 3g3e_A D-amino-acid oxidase; F 98.9 5.7E-10 2E-14 102.1 3.4 35 78-112 1-41 (351)
103 3ka7_A Oxidoreductase; structu 98.9 4.9E-09 1.7E-13 98.2 9.5 58 190-247 196-255 (425)
104 3k7m_X 6-hydroxy-L-nicotine ox 98.9 3.4E-09 1.2E-13 99.6 8.4 50 192-243 209-258 (431)
105 3ics_A Coenzyme A-disulfide re 98.9 1.9E-08 6.4E-13 98.6 13.3 135 53-244 13-152 (588)
106 2bs2_A Quinol-fumarate reducta 98.8 3.8E-08 1.3E-12 97.4 15.0 35 77-111 5-39 (660)
107 1hyu_A AHPF, alkyl hydroperoxi 98.8 1.6E-08 5.5E-13 97.7 11.8 112 76-245 211-327 (521)
108 3lov_A Protoporphyrinogen oxid 98.8 2.4E-08 8E-13 95.1 11.9 55 191-246 237-291 (475)
109 3cgb_A Pyridine nucleotide-dis 98.8 2.8E-08 9.6E-13 95.0 12.3 136 53-245 13-153 (480)
110 1s3e_A Amine oxidase [flavin-c 98.8 5.3E-08 1.8E-12 93.9 14.2 54 191-245 216-269 (520)
111 4gcm_A TRXR, thioredoxin reduc 98.8 2.6E-08 8.8E-13 89.4 10.5 35 76-110 5-39 (312)
112 4gut_A Lysine-specific histone 98.7 7.6E-08 2.6E-12 96.9 13.6 40 204-243 545-584 (776)
113 3kkj_A Amine oxidase, flavin-c 98.7 7.6E-09 2.6E-13 89.4 5.4 35 77-111 2-36 (336)
114 1jnr_A Adenylylsulfate reducta 98.7 2.5E-07 8.6E-12 91.5 16.8 36 76-111 21-60 (643)
115 3klj_A NAD(FAD)-dependent dehy 98.7 9E-08 3.1E-12 88.9 11.7 109 76-244 8-116 (385)
116 2a8x_A Dihydrolipoyl dehydroge 98.7 6.9E-08 2.4E-12 91.8 11.1 33 77-109 3-35 (464)
117 3r9u_A Thioredoxin reductase; 98.7 1.1E-07 3.7E-12 85.0 11.5 111 76-244 3-118 (315)
118 1v59_A Dihydrolipoamide dehydr 98.7 9.8E-08 3.3E-12 91.1 11.8 35 77-111 5-39 (478)
119 2b9w_A Putative aminooxidase; 98.7 2.8E-07 9.5E-12 86.3 14.4 53 191-245 207-259 (424)
120 1rsg_A FMS1 protein; FAD bindi 98.7 7.6E-08 2.6E-12 92.8 10.5 56 190-245 202-258 (516)
121 3sx6_A Sulfide-quinone reducta 98.7 7.6E-08 2.6E-12 90.8 10.2 109 77-247 4-115 (437)
122 2vdc_G Glutamate synthase [NAD 98.7 4.6E-08 1.6E-12 92.9 8.5 77 35-111 71-156 (456)
123 1ojt_A Surface protein; redox- 98.7 9.7E-08 3.3E-12 91.3 10.6 35 77-111 6-40 (482)
124 3nks_A Protoporphyrinogen oxid 98.6 8.9E-08 3E-12 91.1 10.1 53 192-245 236-291 (477)
125 2vvm_A Monoamine oxidase N; FA 98.6 7.9E-08 2.7E-12 92.0 9.6 55 191-245 256-313 (495)
126 3hyw_A Sulfide-quinone reducta 98.6 8.1E-08 2.8E-12 90.5 9.5 35 77-111 2-38 (430)
127 1dxl_A Dihydrolipoamide dehydr 98.6 1.7E-07 5.7E-12 89.2 11.8 36 76-111 5-40 (470)
128 2v3a_A Rubredoxin reductase; a 98.6 3.7E-07 1.3E-11 84.5 13.6 101 77-246 145-245 (384)
129 2yqu_A 2-oxoglutarate dehydrog 98.6 3.3E-07 1.1E-11 86.8 13.2 101 76-246 166-266 (455)
130 3iwa_A FAD-dependent pyridine 98.6 8.9E-08 3.1E-12 91.2 9.3 35 77-111 3-39 (472)
131 1q1r_A Putidaredoxin reductase 98.6 1.1E-07 3.7E-12 89.7 9.7 111 77-246 4-116 (431)
132 3ntd_A FAD-dependent pyridine 98.6 2.3E-07 7.7E-12 90.4 12.3 111 78-244 2-117 (565)
133 3gyx_A Adenylylsulfate reducta 98.6 3.4E-07 1.2E-11 90.7 13.4 35 77-111 22-62 (662)
134 3oc4_A Oxidoreductase, pyridin 98.6 1.3E-07 4.5E-12 89.6 9.7 34 78-111 3-38 (452)
135 2bc0_A NADH oxidase; flavoprot 98.6 1.9E-07 6.5E-12 89.4 10.0 36 76-111 34-72 (490)
136 3kd9_A Coenzyme A disulfide re 98.6 2.3E-07 7.8E-12 87.8 10.4 35 77-111 3-39 (449)
137 3ef6_A Toluene 1,2-dioxygenase 98.5 3.5E-07 1.2E-11 85.5 11.1 34 78-111 3-38 (410)
138 2eq6_A Pyruvate dehydrogenase 98.5 7.8E-07 2.7E-11 84.5 13.4 100 77-246 169-273 (464)
139 3vrd_B FCCB subunit, flavocyto 98.5 1.3E-07 4.4E-12 88.0 7.7 35 77-111 2-38 (401)
140 3h28_A Sulfide-quinone reducta 98.5 5.7E-07 2E-11 84.6 12.3 35 77-111 2-38 (430)
141 3qfa_A Thioredoxin reductase 1 98.5 5.3E-07 1.8E-11 86.9 12.3 36 75-110 30-65 (519)
142 3ayj_A Pro-enzyme of L-phenyla 98.5 4.1E-08 1.4E-12 97.3 4.1 75 30-110 13-97 (721)
143 1ebd_A E3BD, dihydrolipoamide 98.5 3.5E-07 1.2E-11 86.7 10.4 33 77-109 3-35 (455)
144 2r9z_A Glutathione amide reduc 98.5 1.3E-06 4.4E-11 83.0 14.1 100 77-246 166-266 (463)
145 3h8l_A NADH oxidase; membrane 98.5 5.6E-07 1.9E-11 83.9 11.5 34 78-111 2-38 (409)
146 3lxd_A FAD-dependent pyridine 98.5 2E-07 6.9E-12 87.3 8.3 36 76-111 8-45 (415)
147 1ges_A Glutathione reductase; 98.5 9.8E-07 3.4E-11 83.5 13.0 100 77-246 167-267 (450)
148 3fg2_P Putative rubredoxin red 98.5 4.5E-07 1.5E-11 84.6 10.3 35 77-111 1-37 (404)
149 1nhp_A NADH peroxidase; oxidor 98.5 6.6E-07 2.3E-11 84.6 11.3 34 78-111 1-36 (447)
150 2gqw_A Ferredoxin reductase; f 98.5 2.3E-07 8E-12 86.7 8.1 36 76-111 6-43 (408)
151 2cdu_A NADPH oxidase; flavoenz 98.5 5.8E-07 2E-11 85.1 10.8 34 78-111 1-36 (452)
152 3urh_A Dihydrolipoyl dehydroge 98.5 1.5E-06 5.1E-11 83.2 13.6 37 75-111 23-59 (491)
153 3fpz_A Thiazole biosynthetic e 98.5 5.9E-08 2E-12 87.9 3.6 36 76-111 64-101 (326)
154 1xhc_A NADH oxidase /nitrite r 98.5 7.5E-07 2.6E-11 82.0 11.1 35 76-111 7-41 (367)
155 1zmd_A Dihydrolipoyl dehydroge 98.5 6.5E-07 2.2E-11 85.3 10.9 36 76-111 5-40 (474)
156 3dgz_A Thioredoxin reductase 2 98.5 1E-06 3.5E-11 84.2 11.9 35 76-110 5-39 (488)
157 4g6h_A Rotenone-insensitive NA 98.4 8.2E-07 2.8E-11 85.3 10.9 37 75-111 40-76 (502)
158 3s5w_A L-ornithine 5-monooxyge 98.4 3.8E-06 1.3E-10 79.5 15.3 142 76-245 226-378 (463)
159 4b63_A L-ornithine N5 monooxyg 98.4 6.9E-07 2.4E-11 85.8 10.1 59 186-244 141-214 (501)
160 2qae_A Lipoamide, dihydrolipoy 98.4 1.2E-06 4.1E-11 83.3 11.7 35 77-111 2-36 (468)
161 3lad_A Dihydrolipoamide dehydr 98.4 1.4E-06 4.9E-11 82.9 12.1 36 76-111 2-37 (476)
162 1ebd_A E3BD, dihydrolipoamide 98.4 2.3E-06 7.9E-11 81.0 13.4 101 76-246 169-272 (455)
163 3dgh_A TRXR-1, thioredoxin red 98.4 1.6E-06 5.6E-11 82.7 12.2 35 75-109 7-41 (483)
164 2yqu_A 2-oxoglutarate dehydrog 98.4 1E-06 3.4E-11 83.5 10.5 34 78-111 2-35 (455)
165 3lxd_A FAD-dependent pyridine 98.4 3.5E-06 1.2E-10 78.8 13.7 101 77-246 152-253 (415)
166 1m6i_A Programmed cell death p 98.4 1.2E-07 4.2E-12 90.9 3.7 37 75-111 9-47 (493)
167 3l8k_A Dihydrolipoyl dehydroge 98.4 2.2E-06 7.6E-11 81.4 12.2 35 77-111 4-38 (466)
168 3fg2_P Putative rubredoxin red 98.4 3.6E-06 1.2E-10 78.4 13.3 101 76-245 141-242 (404)
169 1v59_A Dihydrolipoamide dehydr 98.4 3.2E-06 1.1E-10 80.5 13.1 100 77-246 183-289 (478)
170 2v3a_A Rubredoxin reductase; a 98.4 7.1E-07 2.4E-11 82.6 8.2 34 77-110 4-39 (384)
171 2hqm_A GR, grase, glutathione 98.4 3.5E-06 1.2E-10 80.4 12.9 101 76-246 184-287 (479)
172 1ojt_A Surface protein; redox- 98.4 2.8E-06 9.7E-11 81.0 12.3 101 76-246 184-288 (482)
173 1zk7_A HGII, reductase, mercur 98.4 5.1E-06 1.8E-10 78.9 13.9 34 76-109 3-36 (467)
174 1q1r_A Putidaredoxin reductase 98.3 5.3E-06 1.8E-10 78.0 13.4 101 76-245 148-251 (431)
175 3iwa_A FAD-dependent pyridine 98.3 5.6E-06 1.9E-10 78.7 13.7 101 76-245 158-259 (472)
176 4eqs_A Coenzyme A disulfide re 98.3 2.5E-06 8.6E-11 80.4 11.1 33 79-111 2-36 (437)
177 3ef6_A Toluene 1,2-dioxygenase 98.3 2.6E-06 8.9E-11 79.6 11.2 101 76-245 142-242 (410)
178 1onf_A GR, grase, glutathione 98.3 5.4E-06 1.9E-10 79.5 13.6 100 77-246 176-277 (500)
179 1xdi_A RV3303C-LPDA; reductase 98.3 4.9E-06 1.7E-10 79.7 13.2 101 76-246 181-281 (499)
180 2x8g_A Thioredoxin glutathione 98.3 2.7E-06 9.3E-11 83.4 11.5 35 75-109 105-139 (598)
181 3ic9_A Dihydrolipoamide dehydr 98.3 6.6E-06 2.3E-10 78.7 13.9 100 76-246 173-276 (492)
182 1mo9_A ORF3; nucleotide bindin 98.3 5.4E-06 1.8E-10 80.0 13.2 99 78-246 215-318 (523)
183 2qae_A Lipoamide, dihydrolipoy 98.3 6.5E-06 2.2E-10 78.2 13.5 102 76-246 173-278 (468)
184 3dk9_A Grase, GR, glutathione 98.3 6E-06 2E-10 78.7 13.0 36 75-110 18-53 (478)
185 1xdi_A RV3303C-LPDA; reductase 98.3 2.2E-06 7.5E-11 82.2 9.9 34 77-110 2-38 (499)
186 3o0h_A Glutathione reductase; 98.3 6.1E-06 2.1E-10 78.7 12.9 102 76-247 190-291 (484)
187 2a8x_A Dihydrolipoyl dehydroge 98.3 7.3E-06 2.5E-10 77.7 13.2 101 76-246 170-273 (464)
188 2wpf_A Trypanothione reductase 98.3 6.3E-06 2.2E-10 78.9 12.7 101 76-246 190-294 (495)
189 1fec_A Trypanothione reductase 98.3 6.7E-06 2.3E-10 78.6 12.8 101 76-246 186-290 (490)
190 1y56_A Hypothetical protein PH 98.3 1E-06 3.6E-11 84.4 7.1 109 77-245 108-220 (493)
191 3ntd_A FAD-dependent pyridine 98.3 8.9E-06 3.1E-10 79.0 13.8 100 76-245 150-268 (565)
192 3ic9_A Dihydrolipoamide dehydr 98.3 2.3E-07 7.9E-12 88.9 2.4 34 77-110 8-41 (492)
193 4b1b_A TRXR, thioredoxin reduc 98.3 7.1E-06 2.4E-10 79.3 12.7 35 77-111 42-76 (542)
194 2gqw_A Ferredoxin reductase; f 98.2 1E-05 3.6E-10 75.4 13.1 97 76-245 144-240 (408)
195 3g5s_A Methylenetetrahydrofola 98.2 7.4E-06 2.5E-10 75.3 11.6 33 78-110 2-34 (443)
196 1nhp_A NADH peroxidase; oxidor 98.2 7.3E-06 2.5E-10 77.3 12.1 99 76-245 148-247 (447)
197 1zmd_A Dihydrolipoyl dehydroge 98.2 8.3E-06 2.8E-10 77.6 12.5 101 77-246 178-284 (474)
198 1dxl_A Dihydrolipoamide dehydr 98.2 6E-06 2E-10 78.4 11.3 101 76-246 176-281 (470)
199 3urh_A Dihydrolipoyl dehydroge 98.2 1.6E-05 5.4E-10 76.0 14.2 101 76-246 197-302 (491)
200 4gde_A UDP-galactopyranose mut 98.2 6.6E-07 2.3E-11 85.7 4.4 53 190-244 222-276 (513)
201 3l8k_A Dihydrolipoyl dehydroge 98.2 1.2E-05 4.1E-10 76.3 13.1 99 76-246 171-274 (466)
202 2cdu_A NADPH oxidase; flavoenz 98.2 1.3E-05 4.6E-10 75.6 13.2 101 76-245 148-248 (452)
203 1zk7_A HGII, reductase, mercur 98.2 1.6E-05 5.4E-10 75.5 13.7 99 76-246 175-273 (467)
204 1lvl_A Dihydrolipoamide dehydr 98.2 6.4E-06 2.2E-10 78.1 10.5 99 76-246 170-270 (458)
205 3oc4_A Oxidoreductase, pyridin 98.2 2.4E-05 8.1E-10 73.9 14.3 100 76-245 146-245 (452)
206 1fec_A Trypanothione reductase 98.2 1.1E-05 3.6E-10 77.3 11.9 32 77-108 3-35 (490)
207 4b1b_A TRXR, thioredoxin reduc 98.2 1.6E-05 5.3E-10 77.0 13.0 100 76-246 222-321 (542)
208 3lad_A Dihydrolipoamide dehydr 98.2 2.7E-05 9.3E-10 74.0 14.3 101 76-246 179-282 (476)
209 1m6i_A Programmed cell death p 98.2 1.7E-05 5.7E-10 76.0 12.8 100 77-245 180-283 (493)
210 1gte_A Dihydropyrimidine dehyd 98.1 2.3E-06 7.9E-11 89.0 6.7 36 75-110 185-221 (1025)
211 2iid_A L-amino-acid oxidase; f 98.1 1.4E-06 4.7E-11 83.4 4.0 52 191-243 242-297 (498)
212 2bc0_A NADH oxidase; flavoprot 98.1 2.5E-05 8.6E-10 74.6 12.8 99 76-245 193-292 (490)
213 3cgb_A Pyridine nucleotide-dis 98.1 2.6E-05 8.8E-10 74.3 12.6 99 76-245 185-283 (480)
214 2e1m_A L-glutamate oxidase; L- 98.1 3.1E-06 1.1E-10 78.0 5.8 36 74-109 41-76 (376)
215 4dna_A Probable glutathione re 98.1 2.9E-05 9.9E-10 73.6 12.7 100 76-246 169-270 (463)
216 2jae_A L-amino acid oxidase; o 98.1 4.6E-06 1.6E-10 79.5 6.6 54 190-243 239-295 (489)
217 3d1c_A Flavin-containing putat 98.0 4.1E-05 1.4E-09 69.8 12.5 109 76-246 165-274 (369)
218 2gag_A Heterotetrameric sarcos 98.0 1.4E-05 4.7E-10 82.6 10.1 35 77-111 128-162 (965)
219 3itj_A Thioredoxin reductase 1 98.0 2.8E-05 9.5E-10 69.8 11.0 95 76-245 172-272 (338)
220 1trb_A Thioredoxin reductase; 98.0 5.5E-05 1.9E-09 67.5 12.8 35 76-110 144-178 (320)
221 3ics_A Coenzyme A-disulfide re 98.0 4.1E-05 1.4E-09 74.8 12.6 98 76-245 186-283 (588)
222 2bcg_G Secretory pathway GDP d 98.0 4.7E-06 1.6E-10 78.9 5.7 36 76-111 10-45 (453)
223 2q0l_A TRXR, thioredoxin reduc 98.0 7E-05 2.4E-09 66.6 13.1 35 76-110 142-176 (311)
224 3kd9_A Coenzyme A disulfide re 98.0 2.9E-05 1E-09 73.2 11.1 99 76-245 147-245 (449)
225 3dk9_A Grase, GR, glutathione 98.0 6.1E-05 2.1E-09 71.6 13.3 101 76-246 186-295 (478)
226 2yg5_A Putrescine oxidase; oxi 98.0 4.6E-06 1.6E-10 78.6 4.4 52 191-244 216-268 (453)
227 1xhc_A NADH oxidase /nitrite r 97.9 3.8E-05 1.3E-09 70.5 10.0 35 77-111 143-177 (367)
228 2zbw_A Thioredoxin reductase; 97.9 7.5E-05 2.6E-09 67.1 11.7 98 76-245 151-253 (335)
229 3o0h_A Glutathione reductase; 97.9 8E-06 2.7E-10 77.9 5.3 34 76-109 25-58 (484)
230 3f8d_A Thioredoxin reductase ( 97.9 8.7E-05 3E-09 66.0 11.5 95 76-245 153-252 (323)
231 2q7v_A Thioredoxin reductase; 97.9 9.2E-05 3.2E-09 66.3 11.7 35 76-110 151-185 (325)
232 1sez_A Protoporphyrinogen oxid 97.9 9.5E-06 3.2E-10 77.6 5.4 57 190-246 243-310 (504)
233 1v0j_A UDP-galactopyranose mut 97.9 9.6E-06 3.3E-10 75.5 5.2 36 76-111 6-42 (399)
234 3hdq_A UDP-galactopyranose mut 97.9 1.2E-05 4E-10 74.8 5.6 37 75-111 27-63 (397)
235 4eqs_A Coenzyme A disulfide re 97.9 9.2E-05 3.2E-09 69.6 11.9 94 77-244 147-240 (437)
236 3dgh_A TRXR-1, thioredoxin red 97.9 0.00015 5.1E-09 69.0 13.5 99 76-245 186-290 (483)
237 1fl2_A Alkyl hydroperoxide red 97.9 9E-05 3.1E-09 65.8 11.0 36 76-111 143-178 (310)
238 1mo9_A ORF3; nucleotide bindin 97.9 1.5E-05 5.1E-10 76.9 6.0 37 74-110 40-76 (523)
239 4dna_A Probable glutathione re 97.8 1.1E-05 3.7E-10 76.5 4.8 34 76-109 4-37 (463)
240 2bi7_A UDP-galactopyranose mut 97.8 1.6E-05 5.5E-10 73.6 5.5 35 77-111 3-37 (384)
241 3r9u_A Thioredoxin reductase; 97.8 0.00016 5.5E-09 64.1 11.9 95 76-245 146-245 (315)
242 3gwf_A Cyclohexanone monooxyge 97.8 0.0002 6.8E-09 69.2 13.2 37 75-111 176-212 (540)
243 3ab1_A Ferredoxin--NADP reduct 97.8 9.9E-05 3.4E-09 67.2 10.5 98 76-245 162-264 (360)
244 1vdc_A NTR, NADPH dependent th 97.8 0.00014 4.6E-09 65.4 11.2 36 76-111 158-193 (333)
245 1i8t_A UDP-galactopyranose mut 97.8 1.5E-05 5E-10 73.4 4.7 34 78-111 2-35 (367)
246 2hqm_A GR, grase, glutathione 97.8 1.5E-05 5.3E-10 75.9 4.7 35 76-110 10-44 (479)
247 3dgz_A Thioredoxin reductase 2 97.8 0.00031 1.1E-08 66.9 13.4 34 76-109 184-217 (488)
248 2z3y_A Lysine-specific histone 97.8 2.6E-05 9.1E-10 77.3 6.1 38 74-111 104-141 (662)
249 4dsg_A UDP-galactopyranose mut 97.7 2.4E-05 8.1E-10 74.7 5.5 58 188-247 214-273 (484)
250 2r9z_A Glutathione amide reduc 97.7 2.2E-05 7.6E-10 74.4 5.1 35 76-110 3-37 (463)
251 2xag_A Lysine-specific histone 97.7 3.5E-05 1.2E-09 78.2 6.5 38 74-111 275-312 (852)
252 1ges_A Glutathione reductase; 97.7 1.9E-05 6.6E-10 74.6 4.4 34 77-110 4-37 (450)
253 1onf_A GR, grase, glutathione 97.7 2.4E-05 8.2E-10 74.9 5.1 34 77-110 2-35 (500)
254 3cty_A Thioredoxin reductase; 97.7 0.00028 9.5E-09 63.0 11.7 35 76-110 154-188 (319)
255 2eq6_A Pyruvate dehydrogenase 97.7 2.3E-05 7.7E-10 74.4 4.5 34 77-110 6-39 (464)
256 2a87_A TRXR, TR, thioredoxin r 97.7 0.00013 4.3E-09 65.8 8.8 35 76-110 154-188 (335)
257 1lvl_A Dihydrolipoamide dehydr 97.7 3E-05 1E-09 73.4 4.6 34 76-109 4-37 (458)
258 1d5t_A Guanine nucleotide diss 97.6 4.8E-05 1.6E-09 71.5 5.6 54 191-245 235-291 (433)
259 3uox_A Otemo; baeyer-villiger 97.6 0.00018 6.1E-09 69.6 9.1 37 75-111 183-219 (545)
260 3pl8_A Pyranose 2-oxidase; sub 97.6 4.9E-05 1.7E-09 74.8 5.2 36 76-111 45-80 (623)
261 3lzw_A Ferredoxin--NADP reduct 97.6 0.00034 1.2E-08 62.4 10.3 36 76-111 153-188 (332)
262 1lqt_A FPRA; NADP+ derivative, 97.6 4.4E-05 1.5E-09 72.3 4.3 36 76-111 2-44 (456)
263 2wpf_A Trypanothione reductase 97.6 4.6E-05 1.6E-09 72.9 4.4 32 77-108 7-39 (495)
264 3p1w_A Rabgdi protein; GDI RAB 97.5 6.3E-05 2.1E-09 71.3 5.0 36 76-111 19-54 (475)
265 1cjc_A Protein (adrenodoxin re 97.5 7.3E-05 2.5E-09 70.8 5.1 36 76-111 5-42 (460)
266 1hyu_A AHPF, alkyl hydroperoxi 97.5 0.00041 1.4E-08 66.7 10.3 35 76-110 354-388 (521)
267 1b37_A Protein (polyamine oxid 97.5 7.5E-05 2.6E-09 70.8 5.0 55 191-245 207-271 (472)
268 2x8g_A Thioredoxin glutathione 97.5 0.0014 4.8E-08 64.0 14.0 34 76-109 285-318 (598)
269 2gv8_A Monooxygenase; FMO, FAD 97.5 0.00026 9E-09 66.6 8.5 35 76-110 211-246 (447)
270 3qfa_A Thioredoxin reductase 1 97.5 0.0014 4.9E-08 62.8 13.5 34 76-109 209-242 (519)
271 3fbs_A Oxidoreductase; structu 97.4 0.00055 1.9E-08 60.0 9.4 34 76-110 140-173 (297)
272 1kdg_A CDH, cellobiose dehydro 97.4 0.00012 4E-09 70.9 5.2 36 76-111 6-41 (546)
273 4g6h_A Rotenone-insensitive NA 97.4 0.00043 1.5E-08 66.3 8.6 34 78-111 218-265 (502)
274 4ap3_A Steroid monooxygenase; 97.3 0.0026 8.9E-08 61.5 13.4 37 75-111 189-225 (549)
275 3k30_A Histamine dehydrogenase 97.3 0.0004 1.4E-08 69.2 7.8 36 76-111 522-559 (690)
276 4a5l_A Thioredoxin reductase; 97.3 0.0014 4.8E-08 58.0 10.5 36 76-111 151-186 (314)
277 4b63_A L-ornithine N5 monooxyg 97.3 0.0047 1.6E-07 58.9 14.5 37 75-111 244-282 (501)
278 2xve_A Flavin-containing monoo 97.2 0.0015 5E-08 61.9 9.8 35 76-110 196-230 (464)
279 1cjc_A Protein (adrenodoxin re 97.1 0.0052 1.8E-07 58.0 13.0 36 76-111 144-200 (460)
280 3t37_A Probable dehydrogenase; 97.1 0.00028 9.4E-09 67.8 4.2 35 76-110 16-51 (526)
281 4a9w_A Monooxygenase; baeyer-v 97.1 0.00028 9.7E-09 63.5 3.8 34 76-110 162-195 (357)
282 1o94_A Tmadh, trimethylamine d 97.0 0.00068 2.3E-08 67.9 6.1 35 76-110 527-563 (729)
283 3q9t_A Choline dehydrogenase a 97.0 0.00051 1.7E-08 66.9 4.8 36 76-111 5-41 (577)
284 2gag_A Heterotetrameric sarcos 97.0 0.0023 7.9E-08 66.1 10.0 35 77-111 284-318 (965)
285 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.0042 1.4E-07 61.6 11.5 30 76-105 493-522 (671)
286 1ju2_A HydroxynitrIle lyase; f 97.0 0.00034 1.2E-08 67.5 3.5 35 76-111 25-59 (536)
287 1gte_A Dihydropyrimidine dehyd 96.9 0.0095 3.2E-07 61.9 13.8 34 77-110 332-366 (1025)
288 1n4w_A CHOD, cholesterol oxida 96.9 0.00069 2.3E-08 64.9 4.8 35 76-110 4-38 (504)
289 1lqt_A FPRA; NADP+ derivative, 96.9 0.0063 2.2E-07 57.4 11.3 36 76-111 146-202 (456)
290 2g1u_A Hypothetical protein TM 96.9 0.0013 4.5E-08 52.3 5.5 37 75-111 17-53 (155)
291 1coy_A Cholesterol oxidase; ox 96.9 0.0011 3.6E-08 63.6 5.6 36 75-110 9-44 (507)
292 3fwz_A Inner membrane protein 96.8 0.0017 6E-08 50.7 5.9 37 75-111 5-41 (140)
293 3qvp_A Glucose oxidase; oxidor 96.8 0.00086 2.9E-08 65.3 4.5 35 76-110 18-53 (583)
294 4gcm_A TRXR, thioredoxin reduc 96.8 0.0014 4.6E-08 58.3 5.2 35 77-111 145-179 (312)
295 1gpe_A Protein (glucose oxidas 96.6 0.0014 5E-08 63.8 4.7 36 76-111 23-59 (587)
296 2jbv_A Choline oxidase; alcoho 96.6 0.0016 5.6E-08 62.9 4.7 36 76-111 12-48 (546)
297 3fim_B ARYL-alcohol oxidase; A 96.5 0.00098 3.4E-08 64.7 3.0 35 77-111 2-37 (566)
298 1lss_A TRK system potassium up 96.5 0.0032 1.1E-07 48.6 5.3 34 77-110 4-37 (140)
299 3ic5_A Putative saccharopine d 96.4 0.0038 1.3E-07 46.5 4.9 35 77-111 5-40 (118)
300 1id1_A Putative potassium chan 96.4 0.0043 1.5E-07 49.1 5.3 35 76-110 2-36 (153)
301 3llv_A Exopolyphosphatase-rela 96.4 0.0042 1.4E-07 48.3 5.0 35 77-111 6-40 (141)
302 3klj_A NAD(FAD)-dependent dehy 96.3 0.0031 1.1E-07 58.1 4.8 36 77-112 146-181 (385)
303 3lk7_A UDP-N-acetylmuramoylala 96.1 0.0055 1.9E-07 57.7 5.2 35 76-110 8-42 (451)
304 2x5o_A UDP-N-acetylmuramoylala 96.1 0.0039 1.3E-07 58.5 4.1 36 76-111 4-39 (439)
305 3c85_A Putative glutathione-re 96.0 0.0068 2.3E-07 49.4 5.0 36 76-111 38-74 (183)
306 2hmt_A YUAA protein; RCK, KTN, 96.0 0.0064 2.2E-07 47.0 4.4 35 77-111 6-40 (144)
307 3ado_A Lambda-crystallin; L-gu 95.8 0.0095 3.3E-07 53.3 5.1 36 76-111 5-40 (319)
308 3dfz_A SIRC, precorrin-2 dehyd 95.7 0.012 3.9E-07 49.9 4.9 36 74-109 28-63 (223)
309 1f0y_A HCDH, L-3-hydroxyacyl-C 95.6 0.015 5.1E-07 51.5 5.8 35 77-111 15-49 (302)
310 4dio_A NAD(P) transhydrogenase 95.6 0.015 5E-07 53.7 5.8 36 76-111 189-224 (405)
311 4e12_A Diketoreductase; oxidor 95.6 0.015 5.1E-07 51.0 5.7 35 77-111 4-38 (283)
312 1kyq_A Met8P, siroheme biosynt 95.6 0.0091 3.1E-07 52.2 4.1 35 76-110 12-46 (274)
313 3l5a_A NADH/flavin oxidoreduct 95.5 0.0014 4.8E-08 61.0 -1.4 35 10-44 343-377 (419)
314 3h8l_A NADH oxidase; membrane 95.5 0.068 2.3E-06 49.2 9.9 36 205-244 235-270 (409)
315 3p2y_A Alanine dehydrogenase/p 95.4 0.014 4.9E-07 53.3 4.9 36 76-111 183-218 (381)
316 1pzg_A LDH, lactate dehydrogen 95.4 0.022 7.4E-07 51.3 6.0 36 76-111 8-44 (331)
317 3i83_A 2-dehydropantoate 2-red 95.4 0.018 6.2E-07 51.5 5.5 33 78-110 3-35 (320)
318 2dpo_A L-gulonate 3-dehydrogen 95.3 0.017 5.8E-07 51.7 5.1 35 77-111 6-40 (319)
319 1vg0_A RAB proteins geranylger 95.3 0.019 6.6E-07 56.2 5.8 36 76-111 7-42 (650)
320 3eag_A UDP-N-acetylmuramate:L- 95.3 0.02 6.9E-07 51.4 5.5 35 77-111 4-39 (326)
321 2raf_A Putative dinucleotide-b 95.2 0.025 8.4E-07 47.3 5.5 36 76-111 18-53 (209)
322 1ks9_A KPA reductase;, 2-dehyd 95.1 0.026 8.9E-07 49.2 5.6 33 79-111 2-34 (291)
323 1x13_A NAD(P) transhydrogenase 95.1 0.023 7.9E-07 52.5 5.4 36 76-111 171-206 (401)
324 1l7d_A Nicotinamide nucleotide 95.1 0.026 9E-07 51.8 5.6 36 76-111 171-206 (384)
325 3l4b_C TRKA K+ channel protien 95.1 0.019 6.4E-07 48.2 4.3 33 79-111 2-34 (218)
326 3oj0_A Glutr, glutamyl-tRNA re 95.0 0.011 3.8E-07 46.1 2.6 35 77-111 21-55 (144)
327 3k96_A Glycerol-3-phosphate de 95.0 0.025 8.4E-07 51.5 5.1 35 76-110 28-62 (356)
328 1zej_A HBD-9, 3-hydroxyacyl-CO 95.0 0.027 9.2E-07 49.7 5.2 35 76-111 11-45 (293)
329 3k6j_A Protein F01G10.3, confi 95.0 0.033 1.1E-06 52.3 6.1 36 76-111 53-88 (460)
330 3doj_A AT3G25530, dehydrogenas 95.0 0.032 1.1E-06 49.6 5.7 36 76-111 20-55 (310)
331 3hn2_A 2-dehydropantoate 2-red 94.9 0.021 7.2E-07 50.8 4.5 33 78-110 3-35 (312)
332 3ghy_A Ketopantoate reductase 94.9 0.027 9.3E-07 50.6 5.2 33 77-109 3-35 (335)
333 4fk1_A Putative thioredoxin re 94.9 0.074 2.5E-06 46.7 7.9 35 76-110 145-180 (304)
334 1lld_A L-lactate dehydrogenase 94.8 0.033 1.1E-06 49.6 5.4 34 77-110 7-42 (319)
335 2ew2_A 2-dehydropantoate 2-red 94.8 0.032 1.1E-06 49.3 5.3 33 78-110 4-36 (316)
336 2vdc_G Glutamate synthase [NAD 94.8 0.034 1.2E-06 52.3 5.7 37 75-111 262-299 (456)
337 1pjc_A Protein (L-alanine dehy 94.8 0.034 1.2E-06 50.6 5.5 36 76-111 166-201 (361)
338 3dtt_A NADP oxidoreductase; st 94.8 0.036 1.2E-06 47.4 5.4 37 75-111 17-53 (245)
339 2y0c_A BCEC, UDP-glucose dehyd 94.8 0.032 1.1E-06 52.9 5.4 35 77-111 8-42 (478)
340 3sx6_A Sulfide-quinone reducta 94.7 0.2 6.9E-06 46.5 10.8 37 204-242 224-267 (437)
341 1zcj_A Peroxisomal bifunctiona 94.7 0.037 1.3E-06 52.2 5.8 36 76-111 36-71 (463)
342 3pef_A 6-phosphogluconate dehy 94.7 0.037 1.3E-06 48.5 5.3 34 78-111 2-35 (287)
343 4a7p_A UDP-glucose dehydrogena 94.6 0.04 1.4E-06 51.6 5.6 35 77-111 8-42 (446)
344 2eez_A Alanine dehydrogenase; 94.6 0.041 1.4E-06 50.2 5.5 36 76-111 165-200 (369)
345 3g0o_A 3-hydroxyisobutyrate de 94.6 0.042 1.4E-06 48.6 5.4 36 76-111 6-41 (303)
346 2hjr_A Malate dehydrogenase; m 94.5 0.047 1.6E-06 49.0 5.8 35 77-111 14-49 (328)
347 1bg6_A N-(1-D-carboxylethyl)-L 94.5 0.041 1.4E-06 49.7 5.4 33 78-110 5-37 (359)
348 3g79_A NDP-N-acetyl-D-galactos 94.5 0.041 1.4E-06 52.0 5.5 35 77-111 18-54 (478)
349 3gg2_A Sugar dehydrogenase, UD 94.5 0.04 1.4E-06 51.8 5.3 34 78-111 3-36 (450)
350 3h28_A Sulfide-quinone reducta 94.5 0.1 3.5E-06 48.4 8.2 36 204-243 216-255 (430)
351 2ewd_A Lactate dehydrogenase,; 94.5 0.045 1.5E-06 48.8 5.4 35 77-111 4-39 (317)
352 2vhw_A Alanine dehydrogenase; 94.4 0.045 1.5E-06 50.2 5.5 37 75-111 166-202 (377)
353 2vns_A Metalloreductase steap3 94.4 0.044 1.5E-06 45.9 5.0 36 76-111 27-62 (215)
354 1nyt_A Shikimate 5-dehydrogena 94.3 0.054 1.9E-06 47.1 5.6 35 76-110 118-152 (271)
355 3g17_A Similar to 2-dehydropan 94.3 0.03 1E-06 49.4 3.9 33 78-110 3-35 (294)
356 3qha_A Putative oxidoreductase 94.3 0.035 1.2E-06 49.0 4.3 35 77-111 15-49 (296)
357 4dll_A 2-hydroxy-3-oxopropiona 94.2 0.05 1.7E-06 48.6 5.2 36 76-111 30-65 (320)
358 3hwr_A 2-dehydropantoate 2-red 94.2 0.053 1.8E-06 48.4 5.3 33 76-109 18-50 (318)
359 1y56_A Hypothetical protein PH 94.2 0.11 3.8E-06 49.2 7.8 42 205-246 274-315 (493)
360 3vtf_A UDP-glucose 6-dehydroge 94.2 0.057 2E-06 50.4 5.6 36 76-111 20-55 (444)
361 1jw9_B Molybdopterin biosynthe 94.2 0.049 1.7E-06 46.8 4.8 35 76-110 30-65 (249)
362 3tl2_A Malate dehydrogenase; c 94.1 0.067 2.3E-06 47.7 5.8 34 76-109 7-41 (315)
363 1z82_A Glycerol-3-phosphate de 94.1 0.06 2.1E-06 48.3 5.4 35 76-110 13-47 (335)
364 4ffl_A PYLC; amino acid, biosy 94.0 0.065 2.2E-06 48.5 5.6 34 78-111 2-35 (363)
365 3phh_A Shikimate dehydrogenase 94.0 0.074 2.5E-06 46.3 5.7 35 77-111 118-152 (269)
366 3pdu_A 3-hydroxyisobutyrate de 94.0 0.038 1.3E-06 48.4 3.9 34 78-111 2-35 (287)
367 2jae_A L-amino acid oxidase; o 94.0 0.11 3.9E-06 48.8 7.5 37 75-111 9-45 (489)
368 3ego_A Probable 2-dehydropanto 94.0 0.06 2.1E-06 47.8 5.2 32 78-110 3-34 (307)
369 3gvi_A Malate dehydrogenase; N 93.9 0.077 2.6E-06 47.5 5.8 36 76-111 6-42 (324)
370 3e8x_A Putative NAD-dependent 93.9 0.069 2.4E-06 45.0 5.3 37 75-111 19-56 (236)
371 3d4o_A Dipicolinate synthase s 93.9 0.072 2.5E-06 46.9 5.5 36 75-110 153-188 (293)
372 2rir_A Dipicolinate synthase, 93.9 0.073 2.5E-06 47.0 5.6 36 75-110 155-190 (300)
373 2uyy_A N-PAC protein; long-cha 93.9 0.076 2.6E-06 47.1 5.7 35 77-111 30-64 (316)
374 1pjq_A CYSG, siroheme synthase 93.9 0.059 2E-06 50.7 5.2 35 76-110 11-45 (457)
375 1mv8_A GMD, GDP-mannose 6-dehy 93.9 0.053 1.8E-06 50.7 4.8 33 79-111 2-34 (436)
376 2v6b_A L-LDH, L-lactate dehydr 93.9 0.069 2.3E-06 47.4 5.3 33 78-110 1-35 (304)
377 4g65_A TRK system potassium up 93.8 0.031 1.1E-06 52.7 3.2 35 77-111 3-37 (461)
378 3l6d_A Putative oxidoreductase 93.8 0.081 2.8E-06 46.9 5.8 36 76-111 8-43 (306)
379 1t2d_A LDH-P, L-lactate dehydr 93.8 0.084 2.9E-06 47.2 5.9 35 77-111 4-39 (322)
380 2egg_A AROE, shikimate 5-dehyd 93.8 0.074 2.5E-06 47.0 5.3 35 76-110 140-175 (297)
381 1b37_A Protein (polyamine oxid 93.8 0.12 4.1E-06 48.5 7.1 36 76-111 3-39 (472)
382 2h78_A Hibadh, 3-hydroxyisobut 93.7 0.063 2.1E-06 47.3 4.8 34 78-111 4-37 (302)
383 4e21_A 6-phosphogluconate dehy 93.7 0.076 2.6E-06 48.3 5.4 36 76-111 21-56 (358)
384 3gpi_A NAD-dependent epimerase 93.7 0.08 2.7E-06 46.0 5.4 35 77-111 3-37 (286)
385 1txg_A Glycerol-3-phosphate de 93.7 0.064 2.2E-06 47.9 4.8 30 79-108 2-31 (335)
386 3ond_A Adenosylhomocysteinase; 93.6 0.081 2.8E-06 49.9 5.5 35 76-110 264-298 (488)
387 3mog_A Probable 3-hydroxybutyr 93.6 0.067 2.3E-06 50.7 5.0 35 77-111 5-39 (483)
388 1p77_A Shikimate 5-dehydrogena 93.6 0.064 2.2E-06 46.7 4.5 35 76-110 118-152 (272)
389 4eez_A Alcohol dehydrogenase 1 93.5 0.062 2.1E-06 48.3 4.6 37 75-111 162-199 (348)
390 3q2o_A Phosphoribosylaminoimid 93.5 0.13 4.4E-06 47.1 6.8 37 75-111 12-48 (389)
391 4gbj_A 6-phosphogluconate dehy 93.5 0.058 2E-06 47.7 4.2 35 77-111 5-39 (297)
392 3l9w_A Glutathione-regulated p 93.5 0.073 2.5E-06 49.4 5.0 35 77-111 4-38 (413)
393 3ggo_A Prephenate dehydrogenas 93.5 0.11 3.8E-06 46.2 6.0 35 76-110 32-68 (314)
394 2qyt_A 2-dehydropantoate 2-red 93.4 0.056 1.9E-06 47.8 4.1 31 78-108 9-45 (317)
395 3gvp_A Adenosylhomocysteinase 93.4 0.076 2.6E-06 49.2 5.0 36 75-110 218-253 (435)
396 2zyd_A 6-phosphogluconate dehy 93.4 0.068 2.3E-06 50.6 4.8 37 75-111 13-49 (480)
397 3pid_A UDP-glucose 6-dehydroge 93.4 0.081 2.8E-06 49.3 5.2 34 77-111 36-69 (432)
398 2a9f_A Putative malic enzyme ( 93.4 0.085 2.9E-06 48.2 5.1 37 74-110 185-222 (398)
399 3ius_A Uncharacterized conserv 93.4 0.084 2.9E-06 45.8 5.0 35 77-111 5-39 (286)
400 3qsg_A NAD-binding phosphogluc 93.3 0.079 2.7E-06 47.1 4.8 34 76-109 23-57 (312)
401 1hdo_A Biliverdin IX beta redu 93.3 0.12 4E-06 42.2 5.5 34 78-111 4-38 (206)
402 4ezb_A Uncharacterized conserv 93.3 0.091 3.1E-06 46.8 5.1 34 77-110 24-58 (317)
403 3ce6_A Adenosylhomocysteinase; 93.2 0.1 3.4E-06 49.5 5.5 37 75-111 272-308 (494)
404 1vl6_A Malate oxidoreductase; 93.1 0.096 3.3E-06 47.8 5.1 35 75-109 190-225 (388)
405 3p7m_A Malate dehydrogenase; p 93.1 0.13 4.4E-06 46.0 5.9 36 76-111 4-40 (321)
406 4huj_A Uncharacterized protein 93.1 0.054 1.8E-06 45.5 3.2 35 77-111 23-58 (220)
407 1guz_A Malate dehydrogenase; o 93.1 0.11 3.9E-06 46.1 5.5 33 79-111 2-36 (310)
408 1dlj_A UDP-glucose dehydrogena 93.1 0.08 2.7E-06 48.9 4.6 32 79-111 2-33 (402)
409 3pqe_A L-LDH, L-lactate dehydr 93.1 0.11 3.8E-06 46.5 5.4 35 76-110 4-40 (326)
410 1jay_A Coenzyme F420H2:NADP+ o 93.1 0.11 3.8E-06 43.0 5.1 32 79-110 2-34 (212)
411 2hk9_A Shikimate dehydrogenase 93.1 0.093 3.2E-06 45.7 4.8 35 76-110 128-162 (275)
412 2g5c_A Prephenate dehydrogenas 93.0 0.11 3.9E-06 45.1 5.3 33 78-110 2-36 (281)
413 2f1k_A Prephenate dehydrogenas 93.0 0.12 4E-06 44.9 5.3 32 79-110 2-33 (279)
414 2wtb_A MFP2, fatty acid multif 93.0 0.1 3.5E-06 52.0 5.4 35 77-111 312-346 (725)
415 2yg5_A Putrescine oxidase; oxi 92.9 0.15 5.1E-06 47.4 6.3 36 76-111 4-39 (453)
416 2aef_A Calcium-gated potassium 92.9 0.049 1.7E-06 46.1 2.7 35 76-111 8-42 (234)
417 2pv7_A T-protein [includes: ch 92.9 0.1 3.6E-06 46.0 4.9 35 77-111 21-56 (298)
418 1evy_A Glycerol-3-phosphate de 92.9 0.065 2.2E-06 48.6 3.6 32 79-110 17-48 (366)
419 3tnl_A Shikimate dehydrogenase 92.9 0.14 4.6E-06 45.7 5.6 34 76-109 153-187 (315)
420 1leh_A Leucine dehydrogenase; 92.8 0.13 4.5E-06 46.8 5.5 35 75-109 171-205 (364)
421 1ur5_A Malate dehydrogenase; o 92.8 0.14 4.8E-06 45.4 5.6 33 78-110 3-36 (309)
422 4id9_A Short-chain dehydrogena 92.8 0.11 3.9E-06 46.3 5.1 39 73-111 15-54 (347)
423 1yqg_A Pyrroline-5-carboxylate 92.8 0.11 3.9E-06 44.5 4.9 32 79-110 2-34 (263)
424 3don_A Shikimate dehydrogenase 92.7 0.083 2.8E-06 46.2 3.9 36 76-111 116-152 (277)
425 1gpj_A Glutamyl-tRNA reductase 92.7 0.12 4E-06 47.8 5.2 35 76-110 166-201 (404)
426 2rcy_A Pyrroline carboxylate r 92.7 0.11 3.8E-06 44.5 4.8 35 77-111 4-42 (262)
427 1y6j_A L-lactate dehydrogenase 92.7 0.13 4.4E-06 45.9 5.3 35 76-110 6-42 (318)
428 2o3j_A UDP-glucose 6-dehydroge 92.7 0.11 3.7E-06 49.2 5.0 35 77-111 9-45 (481)
429 3cky_A 2-hydroxymethyl glutara 92.7 0.12 4.1E-06 45.4 5.0 35 77-111 4-38 (301)
430 3jyo_A Quinate/shikimate dehyd 92.7 0.15 5.2E-06 44.7 5.6 35 76-110 126-161 (283)
431 1x0v_A GPD-C, GPDH-C, glycerol 92.7 0.075 2.6E-06 47.9 3.7 35 77-111 8-49 (354)
432 3h8v_A Ubiquitin-like modifier 92.7 0.11 3.9E-06 45.7 4.7 36 76-111 35-71 (292)
433 4gwg_A 6-phosphogluconate dehy 92.7 0.12 4.1E-06 48.9 5.2 35 77-111 4-38 (484)
434 1a5z_A L-lactate dehydrogenase 92.7 0.11 3.9E-06 46.2 4.9 32 79-110 2-35 (319)
435 3dfu_A Uncharacterized protein 92.6 0.044 1.5E-06 46.6 2.0 33 77-109 6-38 (232)
436 3ew7_A LMO0794 protein; Q8Y8U8 92.6 0.15 5.3E-06 42.0 5.3 33 79-111 2-35 (221)
437 3orq_A N5-carboxyaminoimidazol 92.6 0.22 7.4E-06 45.5 6.7 37 75-111 10-46 (377)
438 3ktd_A Prephenate dehydrogenas 92.6 0.14 4.9E-06 46.1 5.4 35 77-111 8-42 (341)
439 2gf2_A Hibadh, 3-hydroxyisobut 92.6 0.11 3.9E-06 45.4 4.6 33 79-111 2-34 (296)
440 2p4q_A 6-phosphogluconate dehy 92.5 0.13 4.4E-06 48.9 5.3 36 76-111 9-44 (497)
441 1edz_A 5,10-methylenetetrahydr 92.5 0.17 5.8E-06 45.1 5.7 37 74-110 174-211 (320)
442 4e4t_A Phosphoribosylaminoimid 92.5 0.19 6.5E-06 46.6 6.3 38 74-111 32-69 (419)
443 1vpd_A Tartronate semialdehyde 92.5 0.12 4.2E-06 45.2 4.8 34 78-111 6-39 (299)
444 3ldh_A Lactate dehydrogenase; 92.5 0.19 6.5E-06 45.0 6.0 35 76-110 20-56 (330)
445 3tri_A Pyrroline-5-carboxylate 92.5 0.15 5.2E-06 44.5 5.3 35 77-111 3-40 (280)
446 3c24_A Putative oxidoreductase 92.4 0.15 5.1E-06 44.5 5.3 33 78-110 12-45 (286)
447 3pwz_A Shikimate dehydrogenase 92.4 0.18 6.1E-06 43.9 5.6 36 75-110 118-154 (272)
448 1wdk_A Fatty oxidation complex 92.4 0.12 4E-06 51.5 4.9 36 76-111 313-348 (715)
449 2cvz_A Dehydrogenase, 3-hydrox 92.4 0.11 3.8E-06 45.2 4.3 33 78-111 2-34 (289)
450 3n58_A Adenosylhomocysteinase; 92.3 0.14 4.7E-06 47.7 5.0 36 75-110 245-280 (464)
451 2dbq_A Glyoxylate reductase; D 92.3 0.18 6.3E-06 45.2 5.8 38 74-111 147-184 (334)
452 3vku_A L-LDH, L-lactate dehydr 92.3 0.15 5.2E-06 45.6 5.2 35 76-110 8-44 (326)
453 1hyh_A L-hicdh, L-2-hydroxyiso 92.3 0.13 4.5E-06 45.5 4.8 33 78-110 2-36 (309)
454 1lu9_A Methylene tetrahydromet 92.3 0.17 6E-06 44.2 5.5 35 76-110 118-153 (287)
455 1zud_1 Adenylyltransferase THI 92.3 0.15 5.2E-06 43.8 4.9 36 76-111 27-63 (251)
456 1nvt_A Shikimate 5'-dehydrogen 92.2 0.14 4.7E-06 44.9 4.7 34 76-110 127-160 (287)
457 4hv4_A UDP-N-acetylmuramate--L 92.2 0.12 4E-06 49.2 4.5 36 75-110 20-56 (494)
458 1d5t_A Guanine nucleotide diss 92.2 0.19 6.5E-06 46.7 5.9 36 76-111 5-40 (433)
459 3o8q_A Shikimate 5-dehydrogena 92.2 0.17 6E-06 44.2 5.3 35 76-110 125-160 (281)
460 1yj8_A Glycerol-3-phosphate de 92.2 0.1 3.4E-06 47.6 4.0 34 78-111 22-62 (375)
461 3rui_A Ubiquitin-like modifier 92.2 0.18 6.1E-06 45.3 5.4 36 76-111 33-69 (340)
462 3fbt_A Chorismate mutase and s 92.2 0.16 5.5E-06 44.5 5.0 35 76-110 121-156 (282)
463 2i6t_A Ubiquitin-conjugating e 92.1 0.15 5.3E-06 45.1 5.0 34 77-110 14-49 (303)
464 3t4e_A Quinate/shikimate dehyd 92.1 0.19 6.6E-06 44.6 5.5 35 76-110 147-182 (312)
465 2q3e_A UDP-glucose 6-dehydroge 92.1 0.14 4.6E-06 48.3 4.8 34 78-111 6-41 (467)
466 3h9u_A Adenosylhomocysteinase; 92.1 0.18 6.3E-06 46.7 5.5 35 76-110 210-244 (436)
467 1np3_A Ketol-acid reductoisome 92.0 0.18 6.1E-06 45.4 5.3 35 77-111 16-50 (338)
468 2pgd_A 6-phosphogluconate dehy 92.0 0.15 5.2E-06 48.2 5.1 34 78-111 3-36 (482)
469 3h2s_A Putative NADH-flavin re 92.0 0.19 6.6E-06 41.6 5.2 33 79-111 2-35 (224)
470 3two_A Mannitol dehydrogenase; 92.0 0.24 8.1E-06 44.5 6.2 37 75-111 175-211 (348)
471 1a4i_A Methylenetetrahydrofola 91.9 0.2 6.9E-06 44.0 5.4 36 75-110 163-199 (301)
472 4aj2_A L-lactate dehydrogenase 91.9 0.22 7.4E-06 44.7 5.7 36 75-110 17-54 (331)
473 3gt0_A Pyrroline-5-carboxylate 91.9 0.19 6.3E-06 42.9 5.1 34 78-111 3-40 (247)
474 3ngx_A Bifunctional protein fo 91.8 0.21 7.2E-06 43.4 5.3 36 75-110 148-184 (276)
475 1w4x_A Phenylacetone monooxyge 91.8 0.15 5.3E-06 48.8 5.0 37 75-111 184-220 (542)
476 1ldn_A L-lactate dehydrogenase 91.8 0.22 7.6E-06 44.3 5.7 35 76-110 5-41 (316)
477 3zwc_A Peroxisomal bifunctiona 91.8 0.2 6.8E-06 50.0 5.8 37 75-111 314-350 (742)
478 3ojo_A CAP5O; rossmann fold, c 91.8 0.16 5.5E-06 47.3 4.8 36 76-111 10-45 (431)
479 1oju_A MDH, malate dehydrogena 91.8 0.18 6E-06 44.5 4.8 32 79-110 2-35 (294)
480 3c7a_A Octopine dehydrogenase; 91.8 0.12 4.2E-06 47.5 4.0 30 78-107 3-33 (404)
481 2pzm_A Putative nucleotide sug 91.7 0.25 8.7E-06 43.8 6.0 37 74-110 17-54 (330)
482 2izz_A Pyrroline-5-carboxylate 91.7 0.17 5.8E-06 45.1 4.8 34 77-110 22-59 (322)
483 2gcg_A Glyoxylate reductase/hy 91.7 0.2 6.8E-06 44.9 5.2 38 74-111 152-189 (330)
484 4a26_A Putative C-1-tetrahydro 91.7 0.21 7.1E-06 44.0 5.2 36 75-110 163-199 (300)
485 3vps_A TUNA, NAD-dependent epi 91.7 0.21 7.3E-06 43.7 5.4 36 76-111 6-42 (321)
486 4b4o_A Epimerase family protei 91.6 0.22 7.6E-06 43.4 5.4 34 78-111 1-35 (298)
487 2iz1_A 6-phosphogluconate dehy 91.6 0.19 6.5E-06 47.4 5.2 35 77-111 5-39 (474)
488 2d0i_A Dehydrogenase; structur 91.6 0.23 7.8E-06 44.6 5.5 38 74-111 143-180 (333)
489 2z1m_A GDP-D-mannose dehydrata 91.5 0.24 8.2E-06 43.9 5.6 35 77-111 3-38 (345)
490 1y1p_A ARII, aldehyde reductas 91.5 0.3 1E-05 43.2 6.2 35 75-109 9-44 (342)
491 3d1l_A Putative NADP oxidoredu 91.5 0.17 5.8E-06 43.6 4.4 34 77-110 10-44 (266)
492 2ahr_A Putative pyrroline carb 91.4 0.21 7E-06 42.8 4.9 34 78-111 4-37 (259)
493 3o38_A Short chain dehydrogena 91.4 0.28 9.7E-06 42.0 5.8 36 75-110 20-57 (266)
494 1i36_A Conserved hypothetical 91.4 0.19 6.4E-06 43.2 4.6 30 79-108 2-31 (264)
495 1b0a_A Protein (fold bifunctio 91.4 0.23 7.8E-06 43.4 5.1 36 75-110 157-193 (288)
496 3obb_A Probable 3-hydroxyisobu 91.4 0.2 6.9E-06 44.2 4.8 34 78-111 4-37 (300)
497 3h5n_A MCCB protein; ubiquitin 91.3 0.21 7.1E-06 45.2 4.9 35 76-110 117-152 (353)
498 2d5c_A AROE, shikimate 5-dehyd 91.3 0.24 8.1E-06 42.7 5.1 34 76-110 116-149 (263)
499 1piw_A Hypothetical zinc-type 91.3 0.27 9.1E-06 44.4 5.7 37 75-111 178-214 (360)
500 3ba1_A HPPR, hydroxyphenylpyru 91.2 0.24 8.4E-06 44.4 5.3 38 74-111 161-198 (333)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.96 E-value=4.8e-27 Score=221.01 Aligned_cols=229 Identities=23% Similarity=0.328 Sum_probs=172.9
Q ss_pred CCCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccc
Q 020277 73 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (328)
Q Consensus 73 ~~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~ 152 (328)
...++++|+||||||+||++|+.|+++|++|+|+|+.+... ..+.++.+.+++.++|+++ ++++.+...+....
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~----~~~~~~~l~~~~~~~l~~l--g~~~~~~~~~~~~~ 92 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIK----PVGAAISVWPNGVKCMAHL--GMGDIMETFGGPLR 92 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--------CEEEECHHHHHHHHHT--TCHHHHHHHSCCCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC----CcCeeEEECHHHHHHHHHC--CCHHHHHhhcCCCc
Confidence 34457899999999999999999999999999999986532 1234589999999999999 78888877654322
Q ss_pred ccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEe
Q 020277 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (328)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (328)
. + .+++...+.....++........+.+ .+.++|..|.+.|.+.+....++++++|++++.+++++++++.+|++++
T Consensus 93 ~-~-~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 169 (407)
T 3rp8_A 93 R-M-AYRDFRSGENMTQFSLAPLIERTGSR-PCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSAS 169 (407)
T ss_dssp E-E-EEEETTTCCEEEEEECHHHHHHHSSC-CEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred c-e-EEEECCCCCEeEEecchhhhhhcCCc-eEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEe
Confidence 1 1 12332224555555432212222222 4789999999999998865568899999999999999999999999999
Q ss_pred cCEEEEccCCCchhhhhhcCC-CCceEeeeEEEEEeeccCCCcccccceEEEecCCeEEEEEeCCCCeEEEEEEEeCCC
Q 020277 233 GDLLVGADGIWSKVRKNLFGP-QEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFNKEPA 310 (328)
Q Consensus 233 ad~VV~AdG~~S~vr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~~g~~~~~~~~~~~~ 310 (328)
||+||+|||.+|.+|+.+.+. ..+.+.++.+|++.++.............|++++++++++|+++++++|++....+.
T Consensus 170 a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 248 (407)
T 3rp8_A 170 GDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPA 248 (407)
T ss_dssp ESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCT
T ss_pred eCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCc
Confidence 999999999999999999544 477888888998887643222233446677899999999999999988888777554
No 2
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.92 E-value=3.4e-23 Score=194.15 Aligned_cols=214 Identities=20% Similarity=0.275 Sum_probs=154.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
+.++|+||||||+||++|+.|+++|++|+|+|+.+..... .+.++.+.+++.++|+.+ ++++ ...... ...+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~---~~~g~~l~~~~~~~l~~~--g~~~--~~~~~~-~~~~ 75 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG---FGTGIVVQPELVHYLLEQ--GVEL--DSISVP-SSSM 75 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC---CSCEEECCHHHHHHHHHT--TCCG--GGTCBC-CCEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc---cccccccChhHHHHHHHc--CCcc--cccccc-ccce
Confidence 4579999999999999999999999999999998653111 234588999999999999 4433 111111 1111
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
.+.+...+......+. +. ..+++..|.+.|.+.+....++++++|++++.+++++++++.+|++++||+
T Consensus 76 -~~~~~~~g~~~~~~~~---------~~-~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~ 144 (397)
T 2vou_A 76 -EYVDALTGERVGSVPA---------DW-RFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANW 144 (397)
T ss_dssp -EEEETTTCCEEEEEEC---------CC-CEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESE
T ss_pred -EEEecCCCCccccccC---------cc-cccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCE
Confidence 1121112332222211 11 247788999999988765568999999999999889999999999999999
Q ss_pred EEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccCCCccc-----ccceEEEecCCeEEEEEeCCCC------eEEEEE
Q 020277 236 LVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPADIE-----SVGYRVFLGHKQYFVSSDVGAG------KMQWYA 304 (328)
Q Consensus 236 VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~P~~~g------~~~~~~ 304 (328)
||+|||.+|.+|+.+. ...+.+.++.+|+++++....... ...+.++++++++++++|++++ +++|++
T Consensus 145 vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 223 (397)
T 2vou_A 145 VIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQW 223 (397)
T ss_dssp EEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEE
T ss_pred EEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEE
Confidence 9999999999999998 667888888899888753211111 1235677788889999999864 566666
Q ss_pred EEeCC
Q 020277 305 FNKEP 309 (328)
Q Consensus 305 ~~~~~ 309 (328)
+.+.+
T Consensus 224 ~~~~~ 228 (397)
T 2vou_A 224 YWNVA 228 (397)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 65543
No 3
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.92 E-value=1.1e-23 Score=197.28 Aligned_cols=186 Identities=24% Similarity=0.282 Sum_probs=130.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHH---hccccccc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMR---AGCVTGDR 154 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~---~~~~~~~~ 154 (328)
.+|+||||||+||++|+.|+++|++|+|||+.+.+... ..+.++.++|+++++|+++ ++.+.+.. ........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~--~~G~~i~l~~~~~~~L~~l--g~~~~~~~~~~~~~~~~~~ 77 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSI--LPGYGIHINSFGKQALQEC--LPAENWLAFEEASRYIGGQ 77 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSS--CCCCEEEECHHHHHHHHHH--SCHHHHHHHHHHCEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcC--CCceEEeeCHHHHHHHHHc--CChHHHHHhhhhhcccCcc
Confidence 58999999999999999999999999999998654321 1123589999999999999 44444432 21111111
Q ss_pred ccccccCCCCceEEeecCCc-hhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeC-CeEEEEEecCcEEe
Q 020277 155 INGLVDGISGSWYIKFDTFT-PAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHG-DKVSVVLENGQCYA 232 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-~~v~v~~~~g~~i~ 232 (328)
. .+.. ............. ............++|..|.+.|.+.++.. ++++++|++++.++ ++++++++||++++
T Consensus 78 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~-v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ 154 (412)
T 4hb9_A 78 S-RFYN-ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANT-IQWNKTFVRYEHIENGGIKIFFADGSHEN 154 (412)
T ss_dssp C-EEEC-TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTT-EECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred e-eEec-CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccce-EEEEEEEEeeeEcCCCeEEEEECCCCEEE
Confidence 0 0111 1111111111000 00111111236799999999999988765 88999999998755 46899999999999
Q ss_pred cCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeecc
Q 020277 233 GDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADF 270 (328)
Q Consensus 233 ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
||+||+|||.+|.||+.+.+...+.+.++..+.+....
T Consensus 155 adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~ 192 (412)
T 4hb9_A 155 VDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARL 192 (412)
T ss_dssp ESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEEC
T ss_pred eeEEEECCCCCcchHHHhCCCccccccceeEEEEEEec
Confidence 99999999999999999988888888888888777543
No 4
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.91 E-value=1.1e-22 Score=189.53 Aligned_cols=213 Identities=24% Similarity=0.249 Sum_probs=156.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
+.++|+||||||+|+++|+.|+++|++|+|+|+.+.... .+.++.+.+++.++|+++ ++++.+...+.... .+
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~----~~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~~-~~ 82 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA----FGAGIYLWHNGLRVLEGL--GALDDVLQGSHTPP-TY 82 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC----CSSEEEEEHHHHHHHHHT--TCHHHHHTTCBCCS-CE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC----CCceEEeCccHHHHHHHc--CCHHHHHhhCCCcc-ce
Confidence 468999999999999999999999999999999865321 234588999999999999 77788765443221 11
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEecCcEEec
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (328)
.+.+. +..+..++.. +.+ .+.++|..|.+.|.+.+. ...++++++|++++. + + ++++.+|++++|
T Consensus 83 -~~~~~--g~~~~~~~~~------~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~~g~~~~a 149 (379)
T 3alj_A 83 -ETWMH--NKSVSKETFN------GLP-WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQTGEVLEA 149 (379)
T ss_dssp -EEEET--TEEEEEECGG------GCC-EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEETTSCEEEC
T ss_pred -EEEeC--CceeeeccCC------CCc-eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEECCCCEEEc
Confidence 12221 3333333211 234 478999999999988762 245889999999987 3 3 788888989999
Q ss_pred CEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccC----CCcccccceEE--EecCCeEEEEEeCCCCeEEEEEEEe
Q 020277 234 DLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFV----PADIESVGYRV--FLGHKQYFVSSDVGAGKMQWYAFNK 307 (328)
Q Consensus 234 d~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~g~~~~~~~~P~~~g~~~~~~~~~ 307 (328)
|+||+|||.+|.+|+.+.....+.+.++.+|++.++.. +.........+ +++++++++++|+++++++|++...
T Consensus 150 d~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 229 (379)
T 3alj_A 150 DLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAP 229 (379)
T ss_dssp SEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEEC
T ss_pred CEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEec
Confidence 99999999999999998765566778888888876542 22211112233 5688899999999999988887765
Q ss_pred C
Q 020277 308 E 308 (328)
Q Consensus 308 ~ 308 (328)
.
T Consensus 230 ~ 230 (379)
T 3alj_A 230 A 230 (379)
T ss_dssp T
T ss_pred C
Confidence 4
No 5
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.91 E-value=2.7e-22 Score=188.12 Aligned_cols=223 Identities=17% Similarity=0.227 Sum_probs=159.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeech-hHHHHHHhcCchHHHHHHHhcccccc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQS-NALAALEAIDLDVAEEVMRAGCVTGD 153 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~-~~~~~l~~l~~g~~~~l~~~~~~~~~ 153 (328)
.+.++|+||||||+||++|+.|+++|++|+|+|+.+.... ...++++.+.+ ++.++|+++ ++++.+.........
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~--~~~g~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~~~ 99 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA--RIFGGTLDLHKGSGQEAMKKA--GLLQTYYDLALPMGV 99 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC--CCCSCCEECCTTTHHHHHHHT--TCHHHHHHHCBCCCE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc--cccCCeeeeCCccHHHHHHhc--ChHHHHHHhhcccce
Confidence 3567999999999999999999999999999999865321 11233466665 678999998 788888765433222
Q ss_pred cccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEec
Q 020277 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (328)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (328)
.+++ ..+........ ......+ ...++|..|.+.|.+.+....++++++|++++.+++++++++.+|++++|
T Consensus 100 ---~~~~-~~g~~~~~~~~-~~~~~~~---~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a 171 (398)
T 2xdo_A 100 ---NIAD-EKGNILSTKNV-KPENRFD---NPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETA 171 (398)
T ss_dssp ---EEEC-SSSEEEEECCC-GGGTTSS---CCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEE
T ss_pred ---EEEC-CCCCchhhccc-cccCCCC---CceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEec
Confidence 2222 23333322200 0001111 23689999999999987655688999999999988889999999989999
Q ss_pred CEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccCC---Ccc---cccceEEEecCCeEEEEEeCCCCeEEEEEEEe
Q 020277 234 DLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVP---ADI---ESVGYRVFLGHKQYFVSSDVGAGKMQWYAFNK 307 (328)
Q Consensus 234 d~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~g~~~~~~~~P~~~g~~~~~~~~~ 307 (328)
|+||+|||.+|.+|+.+. ...+.+.++.++++.+.... +.. ...+..++++++..++++|.+++.++|++.+.
T Consensus 172 d~vV~AdG~~S~vR~~l~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 250 (398)
T 2xdo_A 172 DLVILANGGMSKVRKFVT-DTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFK 250 (398)
T ss_dssp SEEEECSCTTCSCCTTTC-CCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEE
T ss_pred CEEEECCCcchhHHhhcc-CCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEe
Confidence 999999999999999874 45677888888877754211 110 11234456688888889999999888887765
Q ss_pred CCC
Q 020277 308 EPA 310 (328)
Q Consensus 308 ~~~ 310 (328)
.++
T Consensus 251 ~~~ 253 (398)
T 2xdo_A 251 TPD 253 (398)
T ss_dssp CCT
T ss_pred cCc
Confidence 543
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.90 E-value=2.1e-22 Score=194.20 Aligned_cols=211 Identities=17% Similarity=0.132 Sum_probs=147.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
.+.++|+||||||+||++|+.|+++|++|+|+|+.+..... +.++.++++++++|+++ |+++++... .. ..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~--~~ 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE----SRGLGFTARTMEVFDQR--GILPAFGPV-ET--ST 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCC----CCSEEECHHHHHHHHHT--TCGGGGCSC-CE--ES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCC----CceeEECHHHHHHHHHC--CCHHHHHhc-cc--cc
Confidence 45689999999999999999999999999999998653221 23488999999999998 666665432 10 00
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEecCc---
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ--- 229 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~--- 229 (328)
.. .+ +.. .++.. ......+..+.++|..|++.|.+.+. ...++++++|++++++++++++++.++.
T Consensus 81 ~~-~~----~~~--~~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~ 151 (499)
T 2qa2_A 81 QG-HF----GGR--PVDFG--VLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPR 151 (499)
T ss_dssp EE-EE----TTE--EEEGG--GSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEE
T ss_pred cc-ee----cce--ecccc--cCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcE
Confidence 00 00 111 11111 11123455689999999999988752 2458889999999999999999998875
Q ss_pred EEecCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccCCCcccccceEEEecCCeEEEEEeCCCCeEEEEEEE
Q 020277 230 CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFN 306 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~~g~~~~~~~~ 306 (328)
+++||+||+|||.+|.+|+.+..........+..+.+.+... . .. ....+++.++++++++|+++|.+++++..
T Consensus 152 ~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~-~-~~-~~~~~~~~~~g~~~~~P~~~g~~~~~~~~ 225 (499)
T 2qa2_A 152 SLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGC-E-IT-PRPIGETVPLGMVMSAPLGDGVDRIIVCE 225 (499)
T ss_dssp EEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESC-C-CC-CEEEEEEETTEEEEEEECSSSCEEEEEEE
T ss_pred EEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEEC-C-CC-cceEEEECCCeEEEEEEcCCCEEEEEEEe
Confidence 899999999999999999988433222222233444444321 1 11 12456678889999999999987666554
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.90 E-value=2.8e-22 Score=193.39 Aligned_cols=211 Identities=15% Similarity=0.145 Sum_probs=146.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
.+.++|+||||||+||++|+.|+++|++|+|+|+.+..... +.++.++++++++|+++ |+++++... .. ..
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~--~~ 79 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGE----SRGLGFTARTMEVFDQR--GILPRFGEV-ET--ST 79 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCC----CCSEEECHHHHHHHHTT--TCGGGGCSC-CB--CC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CCcceECHHHHHHHHHC--CCHHHHHhc-cc--cc
Confidence 45689999999999999999999999999999998654221 23488999999999998 666665432 10 00
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEecCc---
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ--- 229 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~--- 229 (328)
.. .+ +.. .++... .....+..+.++|..+++.|.+.+. ...++++++|++++++++++++++.++.
T Consensus 80 ~~-~~----~~~--~~~~~~--~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~ 150 (500)
T 2qa1_A 80 QG-HF----GGL--PIDFGV--LEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKH 150 (500)
T ss_dssp EE-EE----TTE--EEEGGG--STTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEE
T ss_pred cc-cc----cce--eccccc--CCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCE
Confidence 00 00 011 111110 1112344678999999999988752 2458889999999999999999988875
Q ss_pred EEecCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccCCCcccccceEEEecCCeEEEEEeCCCCeEEEEEEE
Q 020277 230 CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFN 306 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~~g~~~~~~~~ 306 (328)
+++||+||+|||.+|.+|+.+..........+..+.+.+.... .. ....+++.++++++++|+++|.+++++..
T Consensus 151 ~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~g~~~~~p~~~g~~~~~~~~ 224 (500)
T 2qa1_A 151 TLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE--LQ-PRMIGETLPGGMVMVGPLPGGITRIIVCE 224 (500)
T ss_dssp EEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC--CC-CEEEEEEETTEEEEEEEETTTEEEEEEEE
T ss_pred EEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC--CC-CceEEEECCCcEEEEEEcCCCEEEEEEEc
Confidence 8999999999999999999884332222223344444443211 11 12456677889999999999986666554
No 8
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.89 E-value=5.1e-22 Score=186.07 Aligned_cols=213 Identities=20% Similarity=0.252 Sum_probs=154.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+||||||+|+++|+.|+++|++|+|+|+.+... ..+.++.+.+++.++|+++ ++++.+........ .+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~----~~~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~~-~~~ 78 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRER----AINGADLLKPAGIRVVEAA--GLLAEVTRRGGRVR-HEL 78 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCCCEECHHHHHHHHHT--TCHHHHHHTTCEEE-CEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCC----ccCceeeECchHHHHHHHc--CcHHHHHHhCCCcc-eeE
Confidence 5799999999999999999999999999999986431 1223578999999999998 77788765433221 111
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCC---ceEecCCeEEEEEEeCCeE--EEEEecCcEE
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD---EIILNESNVIDFKDHGDKV--SVVLENGQCY 231 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v--~v~~~~g~~i 231 (328)
+++ ..+.....++..... ...+.+.++|..|.+.|.+.+.. ..++++++|++++.+++++ ++++.+|+++
T Consensus 79 -~~~-~~g~~~~~~~~~~~~---~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~ 153 (399)
T 2x3n_A 79 -EVY-HDGELLRYFNYSSVD---ARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVL 153 (399)
T ss_dssp -EEE-ETTEEEEEEETTSSC---GGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred -EEe-CCCCEEEecchHHhc---ccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEE
Confidence 111 123233333321110 11235789999999999988743 4588999999999988888 8989899899
Q ss_pred ecCEEEEccCCCchhhhhhcCCCCce--Eeee--EEEEEeeccCCCcccccceEEEecC-CeEEEEEeCCCCeEEEEEEE
Q 020277 232 AGDLLVGADGIWSKVRKNLFGPQEAI--FSGY--TCYTGIADFVPADIESVGYRVFLGH-KQYFVSSDVGAGKMQWYAFN 306 (328)
Q Consensus 232 ~ad~VV~AdG~~S~vr~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~P~~~g~~~~~~~~ 306 (328)
+||+||+|||.+|.+|+.+.....+. +.++ .+|++.++.. .+.. . .++++ +++++++|++++.++|++..
T Consensus 154 ~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~---~~~~-~-~~~~~~~~~~~~~p~~~~~~~~~~~~ 228 (399)
T 2x3n_A 154 RPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV---AERN-R-LYVDSQGGLAYFYPIGFDRARLVVSF 228 (399)
T ss_dssp EEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH---HHCE-E-EEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred ECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCC---CCCc-c-EEEcCCCcEEEEEEcCCCEEEEEEEe
Confidence 99999999999999999885444444 6666 7777665421 1111 3 67788 89999999999888887754
No 9
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.89 E-value=3.1e-21 Score=181.52 Aligned_cols=218 Identities=28% Similarity=0.365 Sum_probs=152.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCe-EEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~-v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
+.++|+||||||+||++|+.|+++|++ |+|+|+.+... . .+.++.+.++++++|+.+ |+++.+...+.....
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~-~---~g~g~~l~~~~~~~l~~l--g~~~~l~~~~~~~~~- 75 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR-P---LGVGINIQPAAVEALAEL--GLGPALAATAIPTHE- 75 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC-C---CSCEEEECHHHHHHHHHT--TCHHHHHHHSEEECE-
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc-c---ceeEEEEChHHHHHHHHC--CChHHHHhhCCCcce-
Confidence 357999999999999999999999999 99999986532 1 234588999999999999 778888765432211
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc----CCceEecCCeEEEEEEeCCeEEEEEec---
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV----GDEIILNESNVIDFKDHGDKVSVVLEN--- 227 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~----~~~~i~~~~~v~~i~~~~~~v~v~~~~--- 227 (328)
+ .+.+ ..+......+.. .......+ ...++|..|.+.|.+.+ +...++++++|++++. ++++++++.+
T Consensus 76 ~-~~~~-~~g~~~~~~~~~-~~~~~~~~-~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~ 150 (410)
T 3c96_A 76 L-RYID-QSGATVWSEPRG-VEAGNAYP-QYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGH 150 (410)
T ss_dssp E-EEEC-TTSCEEEEEECG-GGGTCSSC-EEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETT
T ss_pred E-EEEc-CCCCEEeeccCC-ccccCCCC-eeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCC
Confidence 1 1222 223333222211 11112333 36899999999998875 4345889999999998 6778888876
Q ss_pred C--cEEecCEEEEccCCCchhhhhhcCCC-CceEeeeEEEEEeeccCCCcccccceEEEecC--CeEEEEEeCCC-----
Q 020277 228 G--QCYAGDLLVGADGIWSKVRKNLFGPQ-EAIFSGYTCYTGIADFVPADIESVGYRVFLGH--KQYFVSSDVGA----- 297 (328)
Q Consensus 228 g--~~i~ad~VV~AdG~~S~vr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~P~~~----- 297 (328)
| .+++||+||+|||.+|.+|+.+.+.. .+.+.+...|+++.+..+. ......++++. +++++++|+++
T Consensus 151 g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 228 (410)
T 3c96_A 151 GKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRF--LDGKTMIVANDEHWSRLVAYPISARHAAE 228 (410)
T ss_dssp SCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCC--TTSSEEEEEECTTCCEEEEEECCHHHHTT
T ss_pred CCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccc--cCCCeEEEecCCCCcEEEEEecCCcccCC
Confidence 7 58999999999999999999886443 4667888888877653221 11223445553 67889999963
Q ss_pred C--eEEEEEEEe
Q 020277 298 G--KMQWYAFNK 307 (328)
Q Consensus 298 g--~~~~~~~~~ 307 (328)
| .++|++...
T Consensus 229 g~~~~~w~~~~~ 240 (410)
T 3c96_A 229 GKSLVNWVCMVP 240 (410)
T ss_dssp TCEEEEEEEEEE
T ss_pred CCcEEEEEEEec
Confidence 4 367766554
No 10
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.87 E-value=1.1e-20 Score=187.91 Aligned_cols=222 Identities=14% Similarity=0.152 Sum_probs=145.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-----CCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR-----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~-----~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~ 150 (328)
..++|+||||||+||++|+.|++ .|++|+|+|+.+.... .+.++.++++++++|+++ |+++++...+..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~----~gra~~l~~~tle~l~~l--Gl~~~l~~~~~~ 80 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVY----NGQADGLQCRTLESLKNL--GLADKILSEAND 80 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCC----SCSCCEECHHHHHHHHTT--TCHHHHHTTCBC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCC----CCceeEEChHHHHHHHHC--CCHHHHHHhccc
Confidence 35799999999999999999999 9999999999865322 223588999999999999 888988765433
Q ss_pred ccccccccccCC-CCceEE--eecCCchhhhcCCCeEEEecHHHHHHHHHHhc---C--CceEecCCeEEEEEEeC----
Q 020277 151 TGDRINGLVDGI-SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---G--DEIILNESNVIDFKDHG---- 218 (328)
Q Consensus 151 ~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~--~~~i~~~~~v~~i~~~~---- 218 (328)
... + .+++.. .+.... .++... ..........++|..|++.|.+.+ + ...++++++|++++.++
T Consensus 81 ~~~-~-~~~~~~~~g~i~~~~~~~~~~--~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~ 156 (665)
T 1pn0_A 81 MST-I-ALYNPDENGHIRRTDRIPDTL--PGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAE 156 (665)
T ss_dssp CCE-E-EEEEECTTSCEEEEEEEESSC--TTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTT
T ss_pred cce-E-EEEeCCCCcceEeecccCccc--CCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccc
Confidence 211 1 122211 122111 111100 011112236899999999998875 3 24588999999999875
Q ss_pred ----CeEEEEEe------------------------------------------cC--cEEecCEEEEccCCCchhhhhh
Q 020277 219 ----DKVSVVLE------------------------------------------NG--QCYAGDLLVGADGIWSKVRKNL 250 (328)
Q Consensus 219 ----~~v~v~~~------------------------------------------~g--~~i~ad~VV~AdG~~S~vr~~~ 250 (328)
.+|++++. +| ++++||+||+|||++|.||+++
T Consensus 157 ~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~l 236 (665)
T 1pn0_A 157 DPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTL 236 (665)
T ss_dssp CTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred cCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhc
Confidence 46777664 34 4799999999999999999998
Q ss_pred cCCCCceEeeeEEEEEeeccCC-Cccc--ccceEEEecCCeEEEEEeCCCCeEEEEEEEeCC
Q 020277 251 FGPQEAIFSGYTCYTGIADFVP-ADIE--SVGYRVFLGHKQYFVSSDVGAGKMQWYAFNKEP 309 (328)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~g~~~~~~~~P~~~g~~~~~~~~~~~ 309 (328)
... .+.......| ++.+..+ .+.+ .....++..++++++++|++++.++|++.....
T Consensus 237 g~~-~~g~~~~~~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~ 296 (665)
T 1pn0_A 237 GFE-MIGEQTDYIW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQAR 296 (665)
T ss_dssp TCC-CEEEEEEEEE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC-
T ss_pred CCC-CCCCCccEEE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCc
Confidence 533 2222222333 3333211 1111 112233344678899999999987777766543
No 11
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.87 E-value=4.4e-20 Score=181.03 Aligned_cols=226 Identities=14% Similarity=0.129 Sum_probs=149.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
++.++|+|||||++|+++|+.|+++|++|+|+|+.+.+..+. +..+.|++...|+.+ |+++.+..........
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~-----G~~l~p~~~~~l~~l--Gl~~~l~~~~~~~~~~ 93 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRV-----GESLLPGTMSILNRL--GLQEKIDAQNYVKKPS 93 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCC-----CCBCCHHHHHHHHHT--TCHHHHHHHCCEEECE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCce-----eeeECHHHHHHHHHc--CCcHHHHhcCCcccCC
Confidence 346899999999999999999999999999999986543222 367899999999999 7888877654332211
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEe-CCeEEEEEe-cC--
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDH-GDKVSVVLE-NG-- 228 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~-~~~v~v~~~-~g-- 228 (328)
....+......+...+... .......+..+.++|..+.+.|.+.+ ....++++++|++++.+ ++.+.|++. +|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~ 172 (591)
T 3i3l_A 94 ATFLWGQDQAPWTFSFAAP-KVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGES 172 (591)
T ss_dssp EEEECSSSCCCEEEECCCC---CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEE
T ss_pred cEEEecCCCccceeecccc-cccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCce
Confidence 1111111111111122111 01112345568999999999998775 23458889999999875 556778777 66
Q ss_pred cEEecCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeecc-CC-CcccccceEEEecCCeEEEEEeCCCCeEEEEEEE
Q 020277 229 QCYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADF-VP-ADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFN 306 (328)
Q Consensus 229 ~~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~g~~~~~~~~P~~~g~~~~~~~~ 306 (328)
.+++||+||+|||.+|.+|+.+............+....+.. .+ +..........+.++++++++|++++.+++.+..
T Consensus 173 ~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~ 252 (591)
T 3i3l_A 173 VTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVV 252 (591)
T ss_dssp EEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEE
T ss_pred EEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEc
Confidence 589999999999999999998743322222222222232221 11 1111223344556888999999999987776665
Q ss_pred eC
Q 020277 307 KE 308 (328)
Q Consensus 307 ~~ 308 (328)
..
T Consensus 253 ~~ 254 (591)
T 3i3l_A 253 DR 254 (591)
T ss_dssp EG
T ss_pred CH
Confidence 54
No 12
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.87 E-value=1.8e-20 Score=181.42 Aligned_cols=223 Identities=14% Similarity=0.134 Sum_probs=146.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHH-HHHhcCchHHHHHHHhccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
..++|+|||||++|+++|+.|+++|++|+|+|+.+.+.... +..+.|+... +++.+ ++++.+..........
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~l--gl~~~~~~~~~~~~~~ 78 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQI-----GESLLPATVHGICAML--GLTDEMKRAGFPIKRG 78 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCHHHHTTHHHHT--TCHHHHHTTTCCEECE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCC-----CcccCcchHHHHHHHh--CcHHHHHHcCCccccC
Confidence 45799999999999999999999999999999986433222 2557777665 88888 7777776554322111
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeE---EEEEecCc
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKV---SVVLENGQ 229 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v---~v~~~~g~ 229 (328)
....+......+...+.... ....+..+.++|..|.+.|.+.+ ....++++++|++++.+++++ ++...+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~ 155 (512)
T 3e1t_A 79 GTFRWGKEPEPWTFGFTRHP---DDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGV 155 (512)
T ss_dssp EEEECSSCSSCEEEESSSSS---SSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSC
T ss_pred ceEEecCCccccccccccCC---CCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCC
Confidence 11011111111222222111 12234467899999999998875 234588899999999988864 44445674
Q ss_pred --EEecCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccC--CCcccccceEEEecCCeEEEEEeCCCCeEEEEEE
Q 020277 230 --CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFV--PADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 305 (328)
Q Consensus 230 --~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~P~~~g~~~~~~~ 305 (328)
+++||+||+|||.+|.+|+.+.......+....++.+++... .+.........++.++++++++|++++++++.+.
T Consensus 156 ~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~ 235 (512)
T 3e1t_A 156 ELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAV 235 (512)
T ss_dssp EEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEE
T ss_pred EEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEE
Confidence 899999999999999999988322222233456666655421 1111122233455678899999999998777766
Q ss_pred EeC
Q 020277 306 NKE 308 (328)
Q Consensus 306 ~~~ 308 (328)
...
T Consensus 236 ~~~ 238 (512)
T 3e1t_A 236 VSR 238 (512)
T ss_dssp EEH
T ss_pred ecH
Confidence 654
No 13
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.87 E-value=1.5e-21 Score=190.99 Aligned_cols=216 Identities=18% Similarity=0.178 Sum_probs=140.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+||++|+.|+++|++|+|+|+.+..... +.++.+.++++++|+++ |+++.+...+.......
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~----~r~~~l~~~s~~~l~~l--Gl~~~l~~~~~~~~~~~ 121 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGH----DRAGALHIRTVETLDLR--GLLDRFLEGTQVAKGLP 121 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCS----SSCCCBCHHHHHHHHTT--TCHHHHTTSCCBCSBCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCC----ceEEEECHHHHHHHHHc--CChHHHHhcCcccCCce
Confidence 4579999999999999999999999999999998654322 23478999999999999 88888876543322110
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEE--ecC-cE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG-QC 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~--~~g-~~ 230 (328)
+..... ..++.. ......+..+.++|..|.+.|.+.+. ...++++++|++++.+++++++++ .+| .+
T Consensus 122 ---~~~~~~---~~~~~~--~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~ 193 (570)
T 3fmw_A 122 ---FAGIFT---QGLDFG--LVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYP 193 (570)
T ss_dssp ---BTTBCT---TCCBGG--GSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEE
T ss_pred ---eCCccc---cccccc--ccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEE
Confidence 110000 011100 01122344578999999999988752 244788999999999999998888 577 68
Q ss_pred EecCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccCCCcccccceEEEecCCeEEEE-EeCCCCeE-EEEEEEeC
Q 020277 231 YAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVS-SDVGAGKM-QWYAFNKE 308 (328)
Q Consensus 231 i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~P~~~g~~-~~~~~~~~ 308 (328)
++||+||+|||.+|.+|+.+..........+..+...+...... ....+.+.+.+++++ +|+++|.. +|++....
T Consensus 194 ~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~ 270 (570)
T 3fmw_A 194 VRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSSTG 270 (570)
T ss_dssp EEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEEES
T ss_pred EEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEeCC
Confidence 99999999999999999988433222223334444443322111 112223456666666 89999976 66665553
No 14
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.87 E-value=5.5e-20 Score=178.91 Aligned_cols=216 Identities=22% Similarity=0.201 Sum_probs=142.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+||++|+.|+++|++|+|+|+.+..... ..+..+.++++++|+++ |+++.+...+.......
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~----~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~~ 77 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPY----PRAAGQNPRTMELLRIG--GVADEVVRADDIRGTQG 77 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCC----CCSCCBCHHHHHHHHHT--TCHHHHHHSCCSSCTTS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CccceECHHHHHHHHHc--CCHHHHHhhCCCccccc
Confidence 4579999999999999999999999999999998653222 22477999999999999 88888887654332210
Q ss_pred cc---cccCCCCceEEeecCCchh-----hh-cCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCC----e
Q 020277 156 NG---LVDGISGSWYIKFDTFTPA-----AE-KGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD----K 220 (328)
Q Consensus 156 ~~---~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~----~ 220 (328)
.. ......+..+......... .. ...+ ...++|..|.+.|.+.+. ...++++++|++++.+++ +
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~ 156 (535)
T 3ihg_A 78 DFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAG-WAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAG 156 (535)
T ss_dssp CCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCC-CBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSE
T ss_pred ceeeeEEeccCCceeeeccccccccccccccCCCCc-ccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCcccc
Confidence 00 1112233333311111000 11 1111 468899999999988752 245899999999999988 9
Q ss_pred EEEEEecC---cEEecCEEEEccCCCchhhhhhcCCCC-ceEe-eeEEEEEeeccCCCcc-cc-cceEEEecCCeEEEEE
Q 020277 221 VSVVLENG---QCYAGDLLVGADGIWSKVRKNLFGPQE-AIFS-GYTCYTGIADFVPADI-ES-VGYRVFLGHKQYFVSS 293 (328)
Q Consensus 221 v~v~~~~g---~~i~ad~VV~AdG~~S~vr~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~ 293 (328)
+++++.++ .+++||+||+|||.+|.+|+.+..... ..+. ..+.+....+. +... .. .....++.++...+++
T Consensus 157 v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~ 235 (535)
T 3ihg_A 157 VTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADL-SGIMEPGTTGWYYLHHPEFKGTFG 235 (535)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCG-GGTSCTTCCEEEEEECSSCEEEEE
T ss_pred EEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccC-hhhccCCceEEEEEECCCceEEEE
Confidence 99998887 789999999999999999998842221 1221 11222111111 1111 11 1233445677778888
Q ss_pred eCCCCe
Q 020277 294 DVGAGK 299 (328)
Q Consensus 294 P~~~g~ 299 (328)
|++++.
T Consensus 236 p~~~~~ 241 (535)
T 3ihg_A 236 PTDRPD 241 (535)
T ss_dssp ECSSTT
T ss_pred EecCCC
Confidence 998744
No 15
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.87 E-value=3.2e-20 Score=181.08 Aligned_cols=216 Identities=19% Similarity=0.207 Sum_probs=143.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+||++|+.|+++|++|+|+|+.+.... ...+..++++++++|+++ |+.+.+.+.+.......
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~----~~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~~ 98 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT----HPRVGTIGPRSMELFRRW--GVAKQIRTAGWPGDHPL 98 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS----SCCCCEECHHHHHHHHHT--TCHHHHHTSSCCTTSBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC----CCceeeeCHHHHHHHHHc--CChHHHHhhcCCccccc
Confidence 357999999999999999999999999999999865321 123478999999999999 78888876554332110
Q ss_pred c-ccccCCCCceEEeecCCchhh-----hcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEec--
Q 020277 156 N-GLVDGISGSWYIKFDTFTPAA-----EKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN-- 227 (328)
Q Consensus 156 ~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~-- 227 (328)
. .+.....+..+..++...... ....+ .+.++|..|++.|.+.+... ++++++|+++++++++|++++.+
T Consensus 99 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~ 176 (549)
T 2r0c_A 99 DAAWVTRVGGHEVYRIPLGTADTRATPEHTPEP-DAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLR 176 (549)
T ss_dssp CEEEESSBTSCEEEEECCCBTTTSCCCSSCSSC-CEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETT
T ss_pred ceEEeccCCCceeEeecccccccccccCCCCCc-ccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECC
Confidence 0 111112333333333211100 01112 36899999999999887655 89999999999999999888876
Q ss_pred -C--cEEecCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccCCC----cccccceEEEecCC-eEEEEEeCCCCe
Q 020277 228 -G--QCYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVPA----DIESVGYRVFLGHK-QYFVSSDVGAGK 299 (328)
Q Consensus 228 -g--~~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~-~~~~~~P~~~g~ 299 (328)
| .+++||+||+|||.+|.+|+.+.............+...+...+. ........++++++ .+++++|++++.
T Consensus 177 ~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~ 256 (549)
T 2r0c_A 177 TGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRG 256 (549)
T ss_dssp TCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSS
T ss_pred CCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCc
Confidence 6 479999999999999999998843222111112223333322100 00111234555666 788899997654
No 16
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.85 E-value=4.2e-20 Score=174.02 Aligned_cols=220 Identities=18% Similarity=0.154 Sum_probs=145.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+|||||++|+++|+.|+++|++|+|+|+...+.... +..+.+++...|+.+ ++++.+...+........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~-----g~~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~~ 77 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVI-----GESLLPRCMEHLDEA--GFLDAVKAQGFQQKFGAK 77 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCGGGHHHHHHT--TCHHHHHHTTCEEECEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc-----cCcccHhHHHHHHHc--CChHHHHHcCCcccCCcE
Confidence 4799999999999999999999999999999986533222 367889999999998 777887765432221111
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEE--EEEecCc--E
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS--VVLENGQ--C 230 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~--v~~~~g~--~ 230 (328)
+. .+.....++... ......+..+.++|..+.+.|.+.+. ...++++++|++++.+++++. +.+.+|+ +
T Consensus 78 -~~---~~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~ 152 (421)
T 3nix_A 78 -FV---RGKEIADFNFSD-QFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKRE 152 (421)
T ss_dssp -EE---ETTEEEEEETTS-CSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred -EE---eCCeeEEEeehh-hcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEE
Confidence 11 111222222211 11112344678999999999988751 244888999999998877754 5556777 7
Q ss_pred EecCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeecc-C-CCcccccceEEEec---CCeEEEEEeCCCCeEEEEEE
Q 020277 231 YAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADF-V-PADIESVGYRVFLG---HKQYFVSSDVGAGKMQWYAF 305 (328)
Q Consensus 231 i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~g---~~~~~~~~P~~~g~~~~~~~ 305 (328)
++||+||+|||.+|.+|+.+............++...... . ++........+++. ++++++++|.++|+..+.+.
T Consensus 153 ~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~ 232 (421)
T 3nix_A 153 IEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFV 232 (421)
T ss_dssp EEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEE
T ss_pred EEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEE
Confidence 9999999999999999988743322222333333333221 1 11121122233333 67899999999998777666
Q ss_pred EeC
Q 020277 306 NKE 308 (328)
Q Consensus 306 ~~~ 308 (328)
...
T Consensus 233 ~~~ 235 (421)
T 3nix_A 233 GEP 235 (421)
T ss_dssp ECH
T ss_pred ecH
Confidence 543
No 17
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.85 E-value=5.9e-20 Score=171.66 Aligned_cols=216 Identities=15% Similarity=0.238 Sum_probs=141.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCcc--ccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA--IRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~--~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
.++|+||||||+|+++|+.|++.|++|+|+|+.+.. ....+ + ..+.++++++|+++ |+++.+...+.....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~---~-g~l~~~~~~~l~~l--g~~~~~~~~~~~~~~- 74 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIR---A-GVLEQGMVDLLREA--GVDRRMARDGLVHEG- 74 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCC---C-CEECHHHHHHHHHT--TCCHHHHHHCEEESC-
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCc---e-EeECHHHHHHHHHc--CCcHHHHhcCCccce-
Confidence 368999999999999999999999999999998642 11111 1 24899999999999 777777664432211
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeC-CeEEEEE-ecCc-
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHG-DKVSVVL-ENGQ- 229 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~-~~v~v~~-~~g~- 229 (328)
+. +.. .+. ...++. ....+....+.+++..+.+.|.+.+ ....++++++|++++.++ +++.+++ .+|+
T Consensus 75 ~~-~~~--~~~-~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~ 147 (394)
T 1k0i_A 75 VE-IAF--AGQ-RRRIDL---KRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGER 147 (394)
T ss_dssp EE-EEE--TTE-EEEECH---HHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEE
T ss_pred EE-EEE--CCc-eEEecc---ccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcE
Confidence 11 111 111 112221 1111112346788888888887765 234588999999998764 5677877 7887
Q ss_pred -EEecCEEEEccCCCchhhhhhcCCCCceEeee--EEEEEeeccCCCcccccceEEEecCCeEEEEEeCCCCeEEEEEEE
Q 020277 230 -CYAGDLLVGADGIWSKVRKNLFGPQEAIFSGY--TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFN 306 (328)
Q Consensus 230 -~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~~g~~~~~~~~ 306 (328)
+++||+||+|||.+|.+|+.+.....+.+.+. ..|+++....+.+. ....+...+++++++.|..++..+|++..
T Consensus 148 ~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 225 (394)
T 1k0i_A 148 LRLDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVS--HELIYANHPRGFALCSQRSATRSQYYVQV 225 (394)
T ss_dssp EEEECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSC--SSCEEECCTTCCEEEEEEETTEEEEEEEE
T ss_pred EEEEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCc--cceEEEEcCCceEEEEecCCCcEEEEEEe
Confidence 79999999999999999998854434445443 45555543322221 12223334566666666666777777665
Q ss_pred eC
Q 020277 307 KE 308 (328)
Q Consensus 307 ~~ 308 (328)
..
T Consensus 226 ~~ 227 (394)
T 1k0i_A 226 PL 227 (394)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 18
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.84 E-value=1.3e-19 Score=179.68 Aligned_cols=220 Identities=16% Similarity=0.228 Sum_probs=142.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-CCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~-~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
...+|+||||||+||++|+.|++ .|++|+|+|+.+.... .+.++.++++++++|+++ |+.+.+...+.....
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~----~g~a~~l~~~t~e~l~~l--Gl~~~~~~~~~~~~~- 103 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME----LGQADGIACRTMEMFEAF--EFADSILKEACWIND- 103 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS----SCSCCEECHHHHHHHHHT--TCHHHHHHHSEEECE-
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC----CCceeeeCHHHHHHHHHc--CcHHHHHHhcccccc-
Confidence 35799999999999999999999 9999999999865322 223478999999999999 788888765433211
Q ss_pred ccccccCC---CCceEE--eecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CC-ceEecCCeEEEEEEeCC----eE
Q 020277 155 INGLVDGI---SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD----KV 221 (328)
Q Consensus 155 ~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~~----~v 221 (328)
+ .++... .+.... .++.. ......+....++|..+++.|.+.+ +. ..++++++|++++++++ ++
T Consensus 104 ~-~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v 180 (639)
T 2dkh_A 104 V-TFWKPDPGQPGRIARHGRVQDT--EDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV 180 (639)
T ss_dssp E-EEEEECTTSTTCEEEEEEEESS--CTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE
T ss_pred e-EEECCCCCCCcceEeecccCcc--cCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE
Confidence 1 122210 122111 11110 0111122347899999999998875 42 25888999999998763 57
Q ss_pred EEEEe------cC--cEEecCEEEEccCCCchhhhhhcCCCCceEeeeEEEEEeeccCC-Cccc--ccceEEEecCCeEE
Q 020277 222 SVVLE------NG--QCYAGDLLVGADGIWSKVRKNLFGPQEAIFSGYTCYTGIADFVP-ADIE--SVGYRVFLGHKQYF 290 (328)
Q Consensus 222 ~v~~~------~g--~~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~g~~~~~ 290 (328)
++++. +| .+++||+||+|||.+|.+|+.++.. .+.......| ++.+..+ .+.+ .....++. +++++
T Consensus 181 ~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~-~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~-~~g~~ 257 (639)
T 2dkh_A 181 TVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQ-LVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQS-EQGNV 257 (639)
T ss_dssp EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCC-CEECSCSCCE-EEEEEEEEECCTTTTSEEEEEE-TTEEE
T ss_pred EEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCC-CCCCCccceE-EEEEEEEccCCCccceeEEEEc-CCceE
Confidence 77775 45 4799999999999999999988433 2222222222 2222110 0111 11122333 77889
Q ss_pred EEEeCCCC-eEEEEEEEeC
Q 020277 291 VSSDVGAG-KMQWYAFNKE 308 (328)
Q Consensus 291 ~~~P~~~g-~~~~~~~~~~ 308 (328)
+++|++++ .++|++....
T Consensus 258 ~~~P~~~~~~~r~~~~~~~ 276 (639)
T 2dkh_A 258 LIIPREGGHLVRFYVEMDK 276 (639)
T ss_dssp EEEECTTSSCEEEEEECC-
T ss_pred EEEEcCCCcEEEEEEECCC
Confidence 99999998 5666665443
No 19
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.82 E-value=7.6e-19 Score=163.22 Aligned_cols=214 Identities=18% Similarity=0.190 Sum_probs=126.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
+.+||+||||||+||++|+.|+++|++|+|+|+.+..... ..++ -.+.++ +++.++........ ...+
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~-~~~g--~~l~~~---~l~~l~~~~~~~~~------~~~~ 70 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP-VRCG--EGLSKG---ILNEADIKADRSFI------ANEV 70 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS-CCSC--CEEETH---HHHHTTCCCCTTTE------EEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC-Ccee--cccCHH---HHHHcCCCchhhhh------hccc
Confidence 4589999999999999999999999999999997643211 1112 234454 34444211000000 0000
Q ss_pred cc--cccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEEEEE--ecC
Q 020277 156 NG--LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVL--ENG 228 (328)
Q Consensus 156 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~--~~g 228 (328)
.+ +.. ..+........ ...+...++.++|..+.+.|.+.+ |. .++++++|+++..+++.+.... .++
T Consensus 71 ~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~i~R~~~~~~L~~~a~~~G~-~~~~~~~v~~~~~~~~~~~~v~~~~~~ 144 (397)
T 3oz2_A 71 KGARIYG-PSEKRPIILQS----EKAGNEVGYVLERDKFDKHLAALAAKAGA-DVWVKSPALGVIKENGKVAGAKIRHNN 144 (397)
T ss_dssp SEEEEEC-TTCSSCEEEEC----SSSSCCCEEEECHHHHHHHHHHHHHHHTC-EEESSCCEEEEEEETTEEEEEEEEETT
T ss_pred ceEEEEe-CCCceEeeccc----cccCCceeEEEEHHHHHHHHHHHHHhcCc-EEeeeeeeeeeeeccceeeeeeecccc
Confidence 00 111 11111111111 112234468899999999998875 44 4788999999999888765332 233
Q ss_pred --cEEecCEEEEccCCCchhhhhhcCCCCc-eEeeeEEEEEeeccCCCcccccceEEEec---CCeEEEEEeCCCCeEEE
Q 020277 229 --QCYAGDLLVGADGIWSKVRKNLFGPQEA-IFSGYTCYTGIADFVPADIESVGYRVFLG---HKQYFVSSDVGAGKMQW 302 (328)
Q Consensus 229 --~~i~ad~VV~AdG~~S~vr~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~P~~~g~~~~ 302 (328)
.+++||+||+|||.+|.+|+.+...... .+.....+..+ .....+.......++++ ++++++++|.+++..++
T Consensus 145 ~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v 223 (397)
T 3oz2_A 145 EIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQY-RMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANV 223 (397)
T ss_dssp EEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEE-EEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEE
T ss_pred cceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEE-EeeccccCcccceeeeeccCCCceEEEeecccceeEE
Confidence 3689999999999999999988533221 12222222221 11112222233445554 67889999999998766
Q ss_pred EEEEeC
Q 020277 303 YAFNKE 308 (328)
Q Consensus 303 ~~~~~~ 308 (328)
.+....
T Consensus 224 g~~~~~ 229 (397)
T 3oz2_A 224 GIGSSI 229 (397)
T ss_dssp EEEEET
T ss_pred EEeecc
Confidence 655543
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.82 E-value=6.1e-19 Score=168.05 Aligned_cols=211 Identities=16% Similarity=0.129 Sum_probs=131.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+||||||+|+++|+.|+++|++|+|+|+.+....+....+. .+ +.+.++.++ +.+..... . .....
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~--~l---~~~~l~~lg--~~~~~~~~-~--~~~~~ 75 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGD--AV---SKAHFDKLG--MPYPKGEE-L--ENKIN 75 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCC--EE---EHHHHHHTT--CCCCCGGG-E--EEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccc--cc---cHHHHHHhc--CCCCchHH-H--Hhhhc
Confidence 579999999999999999999999999999998653211111222 22 345666663 21110000 0 00000
Q ss_pred c--cccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEE-EEEe---cC
Q 020277 157 G--LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLE---NG 228 (328)
Q Consensus 157 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~---~g 228 (328)
+ ++. ..+.....++ ..++.++|..+.+.|.+.+ ....++++++|++++.++++++ |++. +|
T Consensus 76 ~~~~~~-~~~~~~~~~~----------~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G 144 (453)
T 3atr_A 76 GIKLYS-PDMQTVWTVN----------GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTN 144 (453)
T ss_dssp EEEEEC-TTSSCEEEEE----------EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTT
T ss_pred ceEEEC-CCCceEEeEC----------CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCC
Confidence 0 000 0010000000 1246899999999998875 2345889999999998888765 5554 66
Q ss_pred c--EEecCEEEEccCCCchhhhhhcCCCC---ceE--eeeEEEEEeeccCCCcccccceEEEec----CCeEEEEEeCCC
Q 020277 229 Q--CYAGDLLVGADGIWSKVRKNLFGPQE---AIF--SGYTCYTGIADFVPADIESVGYRVFLG----HKQYFVSSDVGA 297 (328)
Q Consensus 229 ~--~i~ad~VV~AdG~~S~vr~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~P~~~ 297 (328)
+ +++||+||+|||.+|.+|+.+..... +.+ ....+|+..+.............++++ ++++++++|+++
T Consensus 145 ~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~ 224 (453)
T 3atr_A 145 EELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGK 224 (453)
T ss_dssp EEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEET
T ss_pred ceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCC
Confidence 5 89999999999999999998753321 112 234666665443221111222346664 578899999999
Q ss_pred CeEEEEEEEeC
Q 020277 298 GKMQWYAFNKE 308 (328)
Q Consensus 298 g~~~~~~~~~~ 308 (328)
+.+++.+....
T Consensus 225 ~~~~vg~~~~~ 235 (453)
T 3atr_A 225 NKVNVGLGIQG 235 (453)
T ss_dssp TEEEEEEEEES
T ss_pred CeEEEEEEecC
Confidence 98877766654
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.80 E-value=5.3e-18 Score=158.11 Aligned_cols=213 Identities=17% Similarity=0.123 Sum_probs=129.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.... ....++ .+.+ +.++.+ ++++... .....+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~-~~~~~~--~~~~---~~~~~l--g~~~~~~----~~~~~~~ 71 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS-PVRCGE--GLSK---GILNEA--DIKADRS----FIANEVK 71 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC-SCCSCC--EEET---HHHHHT--TCCCCTT----TEEEEES
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC-Cccccc--ccCH---HHHHHc--CCCCChH----Hhhhhcc
Confidence 47999999999999999999999999999999864311 111111 2222 455555 2211100 0000000
Q ss_pred c--cccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEE-EEEe---cC
Q 020277 157 G--LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLE---NG 228 (328)
Q Consensus 157 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~-v~~~---~g 228 (328)
+ +.. ..+.....++.. ..+.+..+.++|..|.+.|.+.+. ...++++++|++++.++++++ |++. ++
T Consensus 72 ~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~ 146 (397)
T 3cgv_A 72 GARIYG-PSEKRPIILQSE----KAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEI 146 (397)
T ss_dssp EEEEEC-TTCSSCEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEE
T ss_pred eEEEEc-CCCCEEEEEecc----ccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeE
Confidence 0 111 111110112111 112345689999999999988752 244888999999999988877 7663 45
Q ss_pred cEEecCEEEEccCCCchhhhhhcCCC-C--ceEeeeEEEEEeeccCCCcccccceEEEe---cCCeEEEEEeCCCCeEEE
Q 020277 229 QCYAGDLLVGADGIWSKVRKNLFGPQ-E--AIFSGYTCYTGIADFVPADIESVGYRVFL---GHKQYFVSSDVGAGKMQW 302 (328)
Q Consensus 229 ~~i~ad~VV~AdG~~S~vr~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~P~~~g~~~~ 302 (328)
.+++||+||+|||.+|.+|+.+.... . +.... .++.......+ .+.....+++ .++++++++|++++++++
T Consensus 147 ~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~v 223 (397)
T 3cgv_A 147 VDVRAKMVIAADGFESEFGRWAGLKSVILARNDII-SALQYRMINVD--VDPDYTDFYLGSIAPAGYIWVFPKGEGMANV 223 (397)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEE-EEEEEEEESCC--CCTTEEEEECSTTSTTEEEEEEEEETTEEEE
T ss_pred EEEEcCEEEECCCcchHhHHhcCCCccCCChhhee-EEEEEEeccCC--CCCCcEEEEeCCcCCCceEEEEECCCCeEEE
Confidence 68999999999999999999884333 1 11111 12222222111 1222345555 478899999999998777
Q ss_pred EEEEeCC
Q 020277 303 YAFNKEP 309 (328)
Q Consensus 303 ~~~~~~~ 309 (328)
.+.....
T Consensus 224 g~~~~~~ 230 (397)
T 3cgv_A 224 GIGSSIN 230 (397)
T ss_dssp EEEEETT
T ss_pred EEEeccc
Confidence 7666554
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.74 E-value=2.3e-16 Score=153.02 Aligned_cols=217 Identities=12% Similarity=0.074 Sum_probs=129.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHH------------CCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHH
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR------------KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE 143 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~------------~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~ 143 (328)
..++|+|||||++|+++|..|++ .|++|+|+|+...+..+. +..+.|++.++|+.+ |+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~-----g~~~~p~~~~~l~~l--Gi~e~ 78 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGV-----GEGTWPSMRSTLSKI--GIDEN 78 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCS-----CEECCTHHHHHHHHH--TCCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcce-----eeechHhHHHHHHHc--CCCHH
Confidence 35799999999999999999999 999999999975432222 477899999999998 55564
Q ss_pred --HHHhccccc--ccccccccCC---CCce-EEeec---------CCc-h------------------------------
Q 020277 144 --VMRAGCVTG--DRINGLVDGI---SGSW-YIKFD---------TFT-P------------------------------ 175 (328)
Q Consensus 144 --l~~~~~~~~--~~~~~~~~~~---~~~~-~~~~~---------~~~-~------------------------------ 175 (328)
+........ ..+..+.... .+.. ...+. ... .
T Consensus 79 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~ 158 (526)
T 2pyx_A 79 DFIRQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIV 158 (526)
T ss_dssp HHHHHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTT
T ss_pred HHHHHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhh
Confidence 444322110 0000000000 0000 00000 000 0
Q ss_pred hhh--cCCCeEEEecHHHHHHHHHHhcC---CceEecCCeEEEEEEeCCe--EEEEEecCcEEecCEEEEccCCCchhhh
Q 020277 176 AAE--KGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLVGADGIWSKVRK 248 (328)
Q Consensus 176 ~~~--~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~i~ad~VV~AdG~~S~vr~ 248 (328)
... ...+..+.++|..|.+.|.+.+. ...++++ +|++++.++++ +.+++.+|++++||+||+|||.+|.+|+
T Consensus 159 ~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~ 237 (526)
T 2pyx_A 159 TAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLG 237 (526)
T ss_dssp SCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCC
T ss_pred ccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHH
Confidence 000 11234678999999999987642 2347777 69999886554 3577778778999999999999999955
Q ss_pred hhcCCCCceEe----eeEEEEEeeccCC--CcccccceEEEecCCeEEEEEeCCCCeEE
Q 020277 249 NLFGPQEAIFS----GYTCYTGIADFVP--ADIESVGYRVFLGHKQYFVSSDVGAGKMQ 301 (328)
Q Consensus 249 ~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~P~~~g~~~ 301 (328)
..++.....+. ....+........ ..... .......+.++++.+|++++..+
T Consensus 238 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~pl~~~~~~ 295 (526)
T 2pyx_A 238 EHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIAS-CTHSTAQPNGWIWDIGLPTRKGV 295 (526)
T ss_dssp CCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCS-SEEEEEETTEEEEEEECSSEEEE
T ss_pred HHhCCCcccccccccCccEEEEEeeccCCCCCCCC-ceeEEecCCCeEEEeeCCCceEE
Confidence 44444321111 1112221122111 11111 12233456778999999886433
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.74 E-value=3.1e-16 Score=151.55 Aligned_cols=212 Identities=12% Similarity=0.078 Sum_probs=124.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH---CCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHH--HHHhcccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE--VMRAGCVT 151 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~---~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~--l~~~~~~~ 151 (328)
.++|+|||||++|+++|+.|++ .|++|+|+|+...+..+. +..+.|+...+++.+ |+.+. +.......
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~-----g~~~~~~~~~~l~~l--gi~~~~~~~~~~~~~ 74 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGV-----GEATFSTVRHFFDYL--GLDEREWLPRCAGGY 74 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------C-----CEECCTTHHHHHHHH--TCCHHHHHHHTTCEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceee-----ccccCcchHHHHHHc--CCCHHHHHHHcCCeE
Confidence 3699999999999999999999 999999999985432222 366788899999988 44443 43322111
Q ss_pred c--ccccccccCCCCceEEeec--------------------------------------CC---chhhh----------
Q 020277 152 G--DRINGLVDGISGSWYIKFD--------------------------------------TF---TPAAE---------- 178 (328)
Q Consensus 152 ~--~~~~~~~~~~~~~~~~~~~--------------------------------------~~---~~~~~---------- 178 (328)
. ..+.. +..........+. .. .....
T Consensus 75 ~~~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (511)
T 2weu_A 75 KLGIRFEN-WSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLG 153 (511)
T ss_dssp ECEEEEES-SSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CC
T ss_pred eccceecC-CCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCcccccccccc
Confidence 0 00000 0000000000000 00 00000
Q ss_pred ------cC--CCeEEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCe--EEEEEecCcEEecCEEEEccCCCchh
Q 020277 179 ------KG--LPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 179 ------~~--~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~i~ad~VV~AdG~~S~v 246 (328)
.. .+..+.++|..+.+.|.+.+ ....++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 154 RSTLAEQRAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp SCCGGGCCSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred ccccccCcCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 01 34567899999999998875 22347778 99999986554 66888888889999999999999999
Q ss_pred hhhhcCCCCce----EeeeEEEEEeeccCCC-cccccceEEEecCCeEEEEEeCCCC
Q 020277 247 RKNLFGPQEAI----FSGYTCYTGIADFVPA-DIESVGYRVFLGHKQYFVSSDVGAG 298 (328)
Q Consensus 247 r~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~P~~~g 298 (328)
|+.+.+..... ......+........+ ... ........++++++++|++++
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~P~~~~ 288 (511)
T 2weu_A 233 INQTLGGRFQSFSDVLPNNRAVALRVPRENDEDMR-PYTTATAMSAGWMWTIPLFKR 288 (511)
T ss_dssp CCCCTCCCEEECTTTCCCCEEEEEEEECSSGGGCC-SSEEEEEETTEEEEEEECSSE
T ss_pred HHHHhCCCCccccccCcccceEEEEeccCCCCCCC-cceeceecCCCcEEEEECCCc
Confidence 76664443211 1111122111121111 011 112344567789999999874
No 24
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.69 E-value=1.4e-15 Score=147.99 Aligned_cols=217 Identities=10% Similarity=0.079 Sum_probs=128.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHH---CCCeEEEEccCCccccCCCccccceeechhHHH-HHHhcCchHHHHHHHhcccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEEVMRAGCVT 151 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~---~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~l~~l~~g~~~~l~~~~~~~ 151 (328)
+.++|+|||||++|+++|+.|++ .|++|+|+|+...+..+. +..+.|+... +++.++....+.+.......
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~ 78 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGV-----GEATIPSLQKVFFDFLGIPEREWMPQVNGAF 78 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCS-----CEECCTHHHHHTHHHHTCCHHHHGGGGTCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCC-----CcccchhHHHHHHHHhCCCHHHHHHhcCchh
Confidence 35799999999999999999999 999999999975432222 3677888888 89888432211132211110
Q ss_pred c--ccccccccC---C-CCceEEeecCC----------------------c---------h-----------hhhcCCCe
Q 020277 152 G--DRINGLVDG---I-SGSWYIKFDTF----------------------T---------P-----------AAEKGLPV 183 (328)
Q Consensus 152 ~--~~~~~~~~~---~-~~~~~~~~~~~----------------------~---------~-----------~~~~~~~~ 183 (328)
. ..+..+... . ....+..+... . . ......+.
T Consensus 79 ~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 158 (538)
T 2aqj_A 79 KAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSH 158 (538)
T ss_dssp ECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCC
T ss_pred hCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCc
Confidence 0 001000000 0 00000000000 0 0 00001345
Q ss_pred EEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCe--EEEEEecCcEEecCEEEEccCCCchhhhhhcCCCCceEe
Q 020277 184 TRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLVGADGIWSKVRKNLFGPQEAIFS 259 (328)
Q Consensus 184 ~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~ 259 (328)
.+.++|..|.+.|.+.+ ....++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+|+.+++.....+.
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~ 237 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMS 237 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECT
T ss_pred cEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccc
Confidence 68899999999998875 22346777 89999886553 567788888899999999999999997766554322221
Q ss_pred e----eEEEEEeeccCCC--cccccceEEEecCCeEEEEEeCCCCe
Q 020277 260 G----YTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGK 299 (328)
Q Consensus 260 ~----~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~P~~~g~ 299 (328)
+ ..++........+ .... .......++++++++|++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~p~~~~~ 282 (538)
T 2aqj_A 238 DYLLCDSAVASAVPNDDARDGVEP-YTSSIAMNSGWTWKIPMLGRF 282 (538)
T ss_dssp TTCCCCEEEEEEEECCHHHHCCCS-SEEEEECSSEEEEEEEETTEE
T ss_pred cccccceEEEEecccCCcccCCCC-ceeeeecCCceEEEecCCCce
Confidence 1 1222211111100 0111 122345677899999998864
No 25
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.68 E-value=2.2e-15 Score=146.93 Aligned_cols=213 Identities=11% Similarity=0.099 Sum_probs=127.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHH---CCCeEEEEccCCccccCCCccccceeechhHHH-HHHhcCchHHHH--HHHhcc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEE--VMRAGC 149 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~---~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~l~~l~~g~~~~--l~~~~~ 149 (328)
+.++|+|||||++|+++|+.|++ .|++|+|+|+...+..+. +..+.|++.+ +++.+ ++.+. +.....
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~p~~~~~~l~~l--Gi~~~~~~~~~~~ 96 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGV-----GEATIPNLQTAFFDFL--GIPEDEWMRECNA 96 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCC-----CEECCTHHHHHTHHHH--TCCHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccce-----eeeechhHHHHHHHHh--CCChHHHHHhcCC
Confidence 46799999999999999999999 999999999975432222 3678899999 99988 44443 443221
Q ss_pred c--ccccccccccCC-------------CCceEEeecC----------------------C-c---h------hhhc---
Q 020277 150 V--TGDRINGLVDGI-------------SGSWYIKFDT----------------------F-T---P------AAEK--- 179 (328)
Q Consensus 150 ~--~~~~~~~~~~~~-------------~~~~~~~~~~----------------------~-~---~------~~~~--- 179 (328)
. ....+.. +... .......+.. . . . ....
T Consensus 97 ~~~~g~~~~~-w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 175 (550)
T 2e4g_A 97 SYKVAIKFIN-WRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRS 175 (550)
T ss_dssp EEECEEEEES-SSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBC
T ss_pred eEEEeeeEee-cccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhh
Confidence 1 1111110 1100 0000111110 0 0 0 0000
Q ss_pred --------CCCeEEEecHHHHHHHHHHhcC---CceEecCCeEEEEEEeCCe--EEEEEecCcEEecCEEEEccCCCchh
Q 020277 180 --------GLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 180 --------~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~i~ad~VV~AdG~~S~v 246 (328)
..++.+.+++..+.+.|.+.+. ...++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 176 PRRLDGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp SBCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred hHhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 2345678999999999988751 3447778 99999876554 56778888889999999999999999
Q ss_pred hhhhcCCCCceEee----eEEEEEeeccCCC--cccccceEEEecCCeEEEEEeCCCC
Q 020277 247 RKNLFGPQEAIFSG----YTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAG 298 (328)
Q Consensus 247 r~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~P~~~g 298 (328)
++.+++.....+.+ ...+........+ .... .......++++++++|+++.
T Consensus 255 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~ipl~~~ 311 (550)
T 2e4g_A 255 INKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEP-FTSAIAMKSGWTWKIPMLGR 311 (550)
T ss_dssp CCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCS-SEEEEECSSEEEEEEECSSE
T ss_pred HHHHhCCCcccccccccccceEEEeecccCCcccCCC-ceeeeecCCceEEEccCCCc
Confidence 66554443221111 1111111111100 0111 12333457788999999874
No 26
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.67 E-value=1.8e-14 Score=141.34 Aligned_cols=219 Identities=12% Similarity=0.060 Sum_probs=125.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC------CCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGC 149 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~------g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~ 149 (328)
..+||+||||||+||++|+.|++. |++|+|+|+....... ...+..+.+++++.| + +.+. ..+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~---~~~g~~l~~~~l~~l--l--~~~~---~~g~ 103 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH---TLSGACLDPRAFEEL--F--PDWK---EKGA 103 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT---CCCCCEECTHHHHHH--C--TTHH---HHTC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc---cccccccCHHHHHHH--H--HHHH---hcCC
Confidence 458999999999999999999999 9999999998653211 111245788877665 3 2222 1111
Q ss_pred cccccc----cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCC-eEE
Q 020277 150 VTGDRI----NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVS 222 (328)
Q Consensus 150 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~-~v~ 222 (328)
...... ..+.. ..+ ...++.... .....+..+.++|..|.+.|.+.+. ...++++++|+++..+++ .+.
T Consensus 104 ~~~~~~~~~~~~~~~-~~~--~~~~~~~~~-~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~ 179 (584)
T 2gmh_A 104 PLNTPVTEDRFGILT-EKY--RIPVPILPG-LPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVK 179 (584)
T ss_dssp CCCEECCEEEEEEEC-SSC--EEECCCCTT-STTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEE
T ss_pred ceeeeechhheeeec-cCC--CccccccCc-cccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEE
Confidence 111000 00111 011 111221000 0011112468999999999988752 244889999999998764 454
Q ss_pred -EEEe------cC---------cEEecCEEEEccCCCchhhhhhc---CCC---CceEeeeEEEEEeeccCCCcccccce
Q 020277 223 -VVLE------NG---------QCYAGDLLVGADGIWSKVRKNLF---GPQ---EAIFSGYTCYTGIADFVPADIESVGY 280 (328)
Q Consensus 223 -v~~~------~g---------~~i~ad~VV~AdG~~S~vr~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (328)
|.+. +| .+++||+||+|||.+|.+|+.+. +.. .+.+.+. .+..+.............
T Consensus 180 gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~-g~~~~~~v~~~~~~~~~~ 258 (584)
T 2gmh_A 180 GIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI-GLKELWVIDEKKWKPGRV 258 (584)
T ss_dssp EEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE-EEEEEEECCGGGCCTTEE
T ss_pred EEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh-hhhhheecCcccccCCeE
Confidence 6665 23 68999999999999999998872 222 2222222 223232211111111112
Q ss_pred EEEec------CCeEEEEEeCC--CCeEEEEEEEeCC
Q 020277 281 RVFLG------HKQYFVSSDVG--AGKMQWYAFNKEP 309 (328)
Q Consensus 281 ~~~~g------~~~~~~~~P~~--~g~~~~~~~~~~~ 309 (328)
..+++ ..+..++||.+ ++.+++.+.....
T Consensus 259 ~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~ 295 (584)
T 2gmh_A 259 DHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLD 295 (584)
T ss_dssp EEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETT
T ss_pred EEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecC
Confidence 23332 12335567888 7887777766543
No 27
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.66 E-value=1.8e-17 Score=165.79 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=87.3
Q ss_pred CCCCccccccCCCCCCccCCCCCcccccCccccccccccCCCCccchhHhHHhHHhcCC---CCCCCCCCCCCeEEEECC
Q 020277 9 SVNLSTTVFSRTHFPVPVYKHSCIDFSRYDHCINYKFRTGTSGQSKNPTQMKAAVAESP---TNNSDSENKKLRILVAGG 85 (328)
Q Consensus 9 ~~~~~~~~~a~~~~~~k~~~g~~~~i~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~i~G~ 85 (328)
-+.+...+++||+||+|+++|+.++|++|+.|++|..+.....++.|.+||..+.+... +....+...+++|+||||
T Consensus 320 ~v~~gR~~~~~P~~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGg 399 (690)
T 3k30_A 320 LIGAARPSIADPFLPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGA 399 (690)
T ss_dssp EEEESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECC
T ss_pred eEEEcHHhHhCccHHHHHHcCCccccccccchhhhhhcccCCCcccCCcCcccCcccccccCccccCcccccceEEEECC
Confidence 34567889999999999999999999999999998777667788999999999965321 222234556789999999
Q ss_pred ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 86 GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 86 g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
|++||++|+.|+++|++|+|+|+...
T Consensus 400 G~AGl~aA~~La~~G~~V~liE~~~~ 425 (690)
T 3k30_A 400 GPSGLEAARALGVRGYDVVLAEAGRD 425 (690)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 99999999999999999999999753
No 28
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.64 E-value=1.3e-15 Score=141.65 Aligned_cols=193 Identities=18% Similarity=0.134 Sum_probs=116.8
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHH-HH-HHHhcccccc
Q 020277 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVA-EE-VMRAGCVTGD 153 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~-~~-l~~~~~~~~~ 153 (328)
++|+||||||+||++|+.|+++ |++|+|+|+.+... ..+.++.+.+++++ ..++.+++ +. +....... .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~----~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~ 73 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE----VLGWGVVLPGRPGQ--HPANPLSYLDAPERLNPQFL-E 73 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC----CCCSEEEEESCTTT--CTTCGGGGSSCGGGGCCEEE-C
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC----cceeEEEeCcHHHH--hhcCcchhhhhhHHHhhccc-c
Confidence 4899999999999999999999 99999999986532 12345788887766 22222332 22 21111000 0
Q ss_pred cccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEecCcEE
Q 020277 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCY 231 (328)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i 231 (328)
.+ .+.. .+..+ . ...+.++ ..++|.+|.+.|.+.+. ...++++++|++++.. .++
T Consensus 74 ~~-~~~~--~g~~~-~-------~~~~~~~-~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~ 130 (381)
T 3c4a_A 74 DF-KLVH--HNEPS-L-------MSTGVLL-CGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLA 130 (381)
T ss_dssp CE-EEEE--SSSEE-E-------CCCCSCE-EEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGG
T ss_pred ce-EEEe--CCeeE-E-------ecCCCce-eeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccc
Confidence 00 0111 11111 0 1113333 68999999999988752 2458889999888542 136
Q ss_pred ecCEEEEccCCCchhhhhhc---CCCCceEeeeEEEEEeeccCCCcccccceEEEecCCeEE--EEEeCCCCeEEEEEE
Q 020277 232 AGDLLVGADGIWSKVRKNLF---GPQEAIFSGYTCYTGIADFVPADIESVGYRVFLGHKQYF--VSSDVGAGKMQWYAF 305 (328)
Q Consensus 232 ~ad~VV~AdG~~S~vr~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~P~~~g~~~~~~~ 305 (328)
+||+||+|||.+|. |+.+. +...+.+.++..|++..... + .....+.+.+.+++ .++|++++..++++.
T Consensus 131 ~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~ 204 (381)
T 3c4a_A 131 DYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF--D--QMNLVFRTHGKDIFIAHAYKYSDTMSTFIVE 204 (381)
T ss_dssp GCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC--S--SEEEEEEEETTEEEEEEEEECSSSCEEEEEE
T ss_pred cCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCC--C--cceeeEeeCCCcEEEEEEEEecCCeEEEEEE
Confidence 89999999999999 98773 33333445667777764321 1 11111112234433 369999887544443
No 29
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.60 E-value=2.3e-16 Score=158.63 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=85.2
Q ss_pred CCCCCccccccCCCCCCccCCCCCcccccCccccccccc-cCCCCccchhHhHHhHHhc---CCCCCCCCCCCCCeEEEE
Q 020277 8 NSVNLSTTVFSRTHFPVPVYKHSCIDFSRYDHCINYKFR-TGTSGQSKNPTQMKAAVAE---SPTNNSDSENKKLRILVA 83 (328)
Q Consensus 8 ~~~~~~~~~~a~~~~~~k~~~g~~~~i~~c~~c~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~i~ 83 (328)
+-+.+...+++||+||+|+++|+.++||+|+.||+|... ......+.|.+|+.++.+. +.+....++.+.++|+||
T Consensus 316 D~V~~gR~~l~~P~~~~~~~~g~~~~~~~ci~Cn~C~~~~~~~~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvII 395 (729)
T 1o94_A 316 DIIGCARPSIADPFLPQKVEQGRYDDIRVCIGCNVCISRWEIGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIV 395 (729)
T ss_dssp SBEEESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHHSSSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEE
T ss_pred CEEEeCchhhcCchHHHHHHcCCccccccccccchhcccccccCCceeeccCccccccccccccccccccccCCceEEEE
Confidence 345567899999999999999999999999999986555 4556778999999988432 212222344567899999
Q ss_pred CCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 84 GGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 84 G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
||||+||++|..|+++|++|+|||+.+.
T Consensus 396 GgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 396 GAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 9999999999999999999999999754
No 30
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.56 E-value=6.6e-16 Score=154.02 Aligned_cols=102 Identities=15% Similarity=0.180 Sum_probs=85.5
Q ss_pred CCCCCccccccCCCCCCccCCCCCcccccCccccc-cccccCCCCccchhHhHHhHHhcCCCCCCCCCCCCCeEEEECCC
Q 020277 8 NSVNLSTTVFSRTHFPVPVYKHSCIDFSRYDHCIN-YKFRTGTSGQSKNPTQMKAAVAESPTNNSDSENKKLRILVAGGG 86 (328)
Q Consensus 8 ~~~~~~~~~~a~~~~~~k~~~g~~~~i~~c~~c~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~G~g 86 (328)
+-+.....+++||+||+|+++|+.++|++|+.|++ |.......+++.|.+||..+.+..... .++...++|+|||||
T Consensus 305 D~V~~gR~~l~~P~l~~k~~~g~~~~~~~c~~c~~~C~~~~~~~~~~~C~~np~~~~e~~~~~--~~~~~~~~vvIIGgG 382 (671)
T 1ps9_A 305 DMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETKMPI--LPAVQKKNLAVVGAG 382 (671)
T ss_dssp SEEEESTHHHHCTTHHHHHHTTCGGGCCCCCCCCTTTHHHHHTTCCCCCSSCTTTTCTTTSCC--CSCSSCCEEEEECCS
T ss_pred CEEEeCHHHHhCcHHHHHHHcCCCCCcccccccccccchhccCCCceEEEeCcccccccccCC--CCCCCCCeEEEECCC
Confidence 33456788999999999999999999999999999 655555677889999999886543222 344567899999999
Q ss_pred hHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 87 IGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 87 ~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++|+.+|..|+++|++|+|+|+.+.
T Consensus 383 ~AGl~aA~~l~~~g~~V~lie~~~~ 407 (671)
T 1ps9_A 383 PAGLAFAINAAARGHQVTLFDAHSE 407 (671)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred HHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 9999999999999999999999754
No 31
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.53 E-value=6.6e-14 Score=134.76 Aligned_cols=137 Identities=21% Similarity=0.153 Sum_probs=101.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
...++|+|||||++||++|..|++.|++|+|+|+.+...+. ....+.+++++.|+.+ ++++... .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-----~~~~~~~~~~~~l~~~--g~~~~~~--------~ 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-----NVLHLWPFTIHDLRAL--GAKKFYG--------R 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-----CEEECCHHHHHHHHTT--THHHHCT--------T
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-----CcccCChhHHHHHHHc--CCccccc--------c
Confidence 45789999999999999999999999999999998653211 2366788888888877 5443210 0
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEe---CCeEEEEE--e-
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDH---GDKVSVVL--E- 226 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~---~~~v~v~~--~- 226 (328)
+.. .. ...+++.++.+.|.+.+ ....++++++|++++.+ ++.+.+++ .
T Consensus 155 ---~~~--------------------~~-~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~ 210 (497)
T 2bry_A 155 ---FCT--------------------GT-LDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNP 210 (497)
T ss_dssp ---TTC--------------------TT-CCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCC
T ss_pred ---ccc--------------------cc-cccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECC
Confidence 000 00 13567888888887765 23458889999999874 34567776 3
Q ss_pred cC--cEEecCEEEEccCCCchhhhhh
Q 020277 227 NG--QCYAGDLLVGADGIWSKVRKNL 250 (328)
Q Consensus 227 ~g--~~i~ad~VV~AdG~~S~vr~~~ 250 (328)
+| .+++||+||+|||.+|.+|+..
T Consensus 211 ~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 211 PAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp CHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred CCCEEEEEcCEEEECCCCCccccccc
Confidence 55 4799999999999999998755
No 32
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.49 E-value=4e-12 Score=118.51 Aligned_cols=65 Identities=20% Similarity=0.216 Sum_probs=49.8
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCc-hhhhhh
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWS-KVRKNL 250 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S-~vr~~~ 250 (328)
..++...+.+.|.+.+ ....++++++|++++.+++++++.+.++ +++||.||+|+|.+| .+++.+
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 215 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPL 215 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGG
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhc
Confidence 3567777777777654 2244788999999999888888876555 799999999999995 455554
No 33
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.48 E-value=2.6e-12 Score=119.17 Aligned_cols=220 Identities=12% Similarity=0.099 Sum_probs=113.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccc--cCCCcccccee--e--chhHHHH-HHhcCchHHHHHHHhcc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAI--RGEGQYRGPIQ--I--QSNALAA-LEAIDLDVAEEVMRAGC 149 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~--~~~g~~~~~~~--l--~~~~~~~-l~~l~~g~~~~l~~~~~ 149 (328)
.+||+|||||++|+++|+.|+++|++|+|+|+..... ..++...+.+. . .+...+. .+.+ .+++.+.+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~ 80 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQ--ELWYELEKETH 80 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHH--HHHHHHHHHCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHH--HHHHHHHHHhC
Confidence 4799999999999999999999999999999986432 11111111111 1 1111221 1222 44555543221
Q ss_pred cccccccccc---cC--------------CCCceEEeecCCchhh---h---cC------CCeEEEecHHHHHHHHHHhc
Q 020277 150 VTGDRINGLV---DG--------------ISGSWYIKFDTFTPAA---E---KG------LPVTRVISRMTLQQILAKAV 200 (328)
Q Consensus 150 ~~~~~~~~~~---~~--------------~~~~~~~~~~~~~~~~---~---~~------~~~~~~i~r~~l~~~L~~~~ 200 (328)
.......+.. .. ..+.....++...... . .+ .+....+++..+.+.|.+.+
T Consensus 81 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (389)
T 2gf3_A 81 HKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELA 160 (389)
T ss_dssp SCCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHH
T ss_pred CcceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHH
Confidence 1000000000 00 0000000000000000 0 00 01124567788888887765
Q ss_pred --CCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchh-hhhhcCCCCce--EeeeEEEEEeeccCCCcc
Q 020277 201 --GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV-RKNLFGPQEAI--FSGYTCYTGIADFVPADI 275 (328)
Q Consensus 201 --~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~v-r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 275 (328)
....++++++|++++.+++++.+++.+| +++||.||.|+|.+|.- ...+ +...+. ..+++.+. +..+...
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~-g~~~pl~~~rg~~~~~---~~~~~~~ 235 (389)
T 2gf3_A 161 EARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKL-NLDIPLQPYRQVVGFF---ESDESKY 235 (389)
T ss_dssp HHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGG-TEECCCEEEEEEEEEE---CCCHHHH
T ss_pred HHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhh-ccCCceEEEEEEEEEE---ecCcccc
Confidence 2244788999999998888888877555 79999999999999853 3332 211222 22333222 1111000
Q ss_pred ---cccceEEEecCCeEEEEEeCCCC-eEEEE
Q 020277 276 ---ESVGYRVFLGHKQYFVSSDVGAG-KMQWY 303 (328)
Q Consensus 276 ---~~~~~~~~~g~~~~~~~~P~~~g-~~~~~ 303 (328)
......++.+++..++++|..+| .+.+.
T Consensus 236 ~~~~~~p~~~~~~~~~~~y~~p~~~g~~~~iG 267 (389)
T 2gf3_A 236 SNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLG 267 (389)
T ss_dssp BGGGTCCEEEEEETTEEEEEECBSTTCCEEEE
T ss_pred cccccCCEEEEeCCCCcEEEcCCCCCCcEEEE
Confidence 01122333344456778898887 65554
No 34
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.46 E-value=7.1e-12 Score=125.01 Aligned_cols=63 Identities=13% Similarity=0.052 Sum_probs=52.7
Q ss_pred EEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchh
Q 020277 184 TRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 184 ~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~v 246 (328)
...++...+.+.|.+.+ ....++++++|++++.++++|.|++.+|++++||.||+|+|.+|.-
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~ 475 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISR 475 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGC
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhc
Confidence 35678888888887764 1245888999999999999999988888899999999999999863
No 35
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.45 E-value=2.1e-12 Score=117.35 Aligned_cols=155 Identities=13% Similarity=0.056 Sum_probs=86.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCc-------cc-cceeechhHHHHHHhcCchHHHHHHHhc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQ-------YR-GPIQIQSNALAALEAIDLDVAEEVMRAG 148 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~-------~~-~~~~l~~~~~~~l~~l~~g~~~~l~~~~ 148 (328)
.++|+|||||++|+++|+.|++.|++|+|+|+.+........ .. +...+.......++. .+.+....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATA-----VKQWQAQG 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHH-----HHHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHH-----HHHHHhCC
Confidence 368999999999999999999999999999998642110000 00 001111111111111 11221111
Q ss_pred ccccccccccccCCCCceEEeecCCchh-hhcCCC-eEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEe
Q 020277 149 CVTGDRINGLVDGISGSWYIKFDTFTPA-AEKGLP-VTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE 226 (328)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~ 226 (328)
..... .... ......... ...+.+ +.....-..+.+.|.+ + ..++++++|++++.++++|++++.
T Consensus 77 ~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g-~~i~~~~~v~~i~~~~~~~~v~~~ 143 (336)
T 1yvv_A 77 HVAEW---------TPLL-YNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--D-MPVSFSCRITEVFRGEEHWNLLDA 143 (336)
T ss_dssp SEEEE---------CCCE-EEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--T-CCEECSCCEEEEEECSSCEEEEET
T ss_pred Ceeec---------cccc-eeccCcccccCCCCCccEEcCccHHHHHHHHHc--c-CcEEecCEEEEEEEeCCEEEEEeC
Confidence 10000 0000 000000000 000111 1111122344444444 3 348899999999999999999998
Q ss_pred cCcEEe-cCEEEEccCCCchhhhh
Q 020277 227 NGQCYA-GDLLVGADGIWSKVRKN 249 (328)
Q Consensus 227 ~g~~i~-ad~VV~AdG~~S~vr~~ 249 (328)
+|+.+. ||+||+|+|.+|.+|..
T Consensus 144 ~g~~~~~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 144 EGQNHGPFSHVIIATPAPQASTLL 167 (336)
T ss_dssp TSCEEEEESEEEECSCHHHHGGGG
T ss_pred CCcCccccCEEEEcCCHHHHHHhh
Confidence 887664 99999999999998864
No 36
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.45 E-value=2e-12 Score=119.82 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=50.3
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEE-EEEecCcEEecCEEEEccCCCch-hhhhh
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSK-VRKNL 250 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~ad~VV~AdG~~S~-vr~~~ 250 (328)
..++...+.+.|.+.+ ....++++++|++++.++++++ |++.+| +++||.||.|+|.+|. +.+.+
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~ 212 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMA 212 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHH
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHc
Confidence 3567788888777764 2244788999999998888887 777666 8999999999999994 44444
No 37
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.45 E-value=1.8e-11 Score=114.15 Aligned_cols=113 Identities=15% Similarity=0.071 Sum_probs=69.2
Q ss_pred EecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCe-EEEEEecCcEEecCEEEEccCCCc-hhhhhhcCCCCceEe--
Q 020277 186 VISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLVGADGIWS-KVRKNLFGPQEAIFS-- 259 (328)
Q Consensus 186 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~ad~VV~AdG~~S-~vr~~~~~~~~~~~~-- 259 (328)
.++...+.+.|.+.+ ....++++++|++++.++++ +.+++.+| +++||.||+|+|.+| .+++.+ +...+...
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~-g~~~~~~~~~ 247 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMA-GFELPIQSHP 247 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHH-TCCCCEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHc-CCCCCccccc
Confidence 456667777776654 22448889999999987765 45767666 799999999999999 566554 33334332
Q ss_pred eeEEEEEeeccCCCcccccceEEEecCCeEEEEEeCCCCeEEEEEEEe
Q 020277 260 GYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFNK 307 (328)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~~g~~~~~~~~~ 307 (328)
+++.+. +..+... .. +++..+..+++.|..+|.+.+.....
T Consensus 248 ~~~~~~---~~~~~~~--~~--~~~~~~~~~y~~p~~~g~~~ig~~~~ 288 (405)
T 2gag_B 248 LQALVS---ELFEPVH--PT--VVMSNHIHVYVSQAHKGELVMGAGID 288 (405)
T ss_dssp EEEEEE---EEBCSCC--CS--EEEETTTTEEEEECTTSEEEEEEEEC
T ss_pred eeEEEe---cCCcccc--Cc--eEEeCCCcEEEEEcCCCcEEEEeccC
Confidence 222221 1111111 11 22333345666788888876665543
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.44 E-value=1.1e-12 Score=121.27 Aligned_cols=65 Identities=18% Similarity=0.308 Sum_probs=51.7
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchh-hhhh
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV-RKNL 250 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~v-r~~~ 250 (328)
..++...+.+.|.+.+ ....++++++|++++.+++++.|++.+| +++||.||.|+|.+|.. .+.+
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHH
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHh
Confidence 4678888888887764 1244888999999999888888887776 89999999999999954 4443
No 39
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.44 E-value=1.6e-12 Score=120.38 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=51.1
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCch-hhhhh
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK-VRKNL 250 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~-vr~~~ 250 (328)
..+++..+.+.|.+.+ ....++++++|++++.+++++.+++.+| +++||.||+|+|.+|. +++.+
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~ 226 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQL 226 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHT
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhc
Confidence 3567788888887765 1245888999999998888887777666 8999999999999987 55554
No 40
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.44 E-value=1e-12 Score=123.63 Aligned_cols=145 Identities=19% Similarity=0.171 Sum_probs=87.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccce-ee-----c--------h-hHHHHHHhcCch
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPI-QI-----Q--------S-NALAALEAIDLD 139 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~-~l-----~--------~-~~~~~l~~l~~g 139 (328)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.........+++. .+ . + .....+..++..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 3468999999999999999999999999999999865321110000110 00 0 0 112223333211
Q ss_pred -HHHHHHHhcccccccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEE
Q 020277 140 -VAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKD 216 (328)
Q Consensus 140 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~ 216 (328)
+.+.+...+.. +..... +..+ ....+.++.+.|.+.+. ...++++++|++++.
T Consensus 105 ~~~~~~~~~Gi~-------~~~~~~----------------g~~~-~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~ 160 (417)
T 3v76_A 105 DFVALVERHGIG-------WHEKTL----------------GQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVER 160 (417)
T ss_dssp HHHHHHHHTTCC-------EEECST----------------TEEE-ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEE
T ss_pred HHHHHHHHcCCC-------cEEeeC----------------CEEe-eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEE
Confidence 11111111110 000000 1111 13345677777766542 234888999999999
Q ss_pred eCCeEEEEEecCcEEecCEEEEccCCCc
Q 020277 217 HGDKVSVVLENGQCYAGDLLVGADGIWS 244 (328)
Q Consensus 217 ~~~~v~v~~~~g~~i~ad~VV~AdG~~S 244 (328)
+++++.|.+.+| +++||.||+|+|.+|
T Consensus 161 ~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 161 TASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp ETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred eCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 888999988877 899999999999999
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.43 E-value=1.8e-12 Score=129.65 Aligned_cols=63 Identities=10% Similarity=0.011 Sum_probs=51.2
Q ss_pred EEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEEEEEecCc-EEecCEEEEccCCCchh
Q 020277 184 TRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDLLVGADGIWSKV 246 (328)
Q Consensus 184 ~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~-~i~ad~VV~AdG~~S~v 246 (328)
...++...+.+.|.+.+ ....++++++|++++.++++|.|++.+|+ +++||.||+|+|.+|.-
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~ 471 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPE 471 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTC
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhc
Confidence 34677888888887764 12448889999999998888999888887 89999999999999863
No 42
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.43 E-value=1.9e-11 Score=112.70 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=48.0
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCch
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
..++...+.+.|.+.+ ....++++++|++++.+++++.+++.+| +++||.||.|+|.+|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 4567778888877764 2244788999999998888888887777 5999999999999985
No 43
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.42 E-value=8.2e-12 Score=114.59 Aligned_cols=66 Identities=8% Similarity=0.135 Sum_probs=51.5
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCe-EEEEEecC--cEEecCEEEEccCCCchh-hhhh
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK-VSVVLENG--QCYAGDLLVGADGIWSKV-RKNL 250 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~g--~~i~ad~VV~AdG~~S~v-r~~~ 250 (328)
..++...+.+.|.+.+ ....++++++|++++.++++ +.+.+.+| .+++||.||+|+|.+|.- .+.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred EEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 4577888888887764 22448889999999988766 88888887 489999999999999954 4433
No 44
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.41 E-value=4.2e-12 Score=123.88 Aligned_cols=66 Identities=23% Similarity=0.252 Sum_probs=49.5
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEE-EEEec---C--cEEecCEEEEccCCCc-hhhhhh
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLEN---G--QCYAGDLLVGADGIWS-KVRKNL 250 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~---g--~~i~ad~VV~AdG~~S-~vr~~~ 250 (328)
..++...+...|.+.+ ....++.+++|+++..+++++. |++.+ | .+++||.||.|+|.|| .+++.+
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc
Confidence 3677888888887654 2234778999999999888754 66654 3 4799999999999999 455544
No 45
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.41 E-value=1.8e-12 Score=122.46 Aligned_cols=205 Identities=16% Similarity=0.128 Sum_probs=106.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+||++|+.|+++|++|+|+|+.+.+....+...+...+...++..++.++.+.+...... . ..+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~--~--~~~ 96 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFG--Y--FGH 96 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHC--E--EEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhccc--c--cce
Confidence 457999999999999999999999999999999864322222222234456667777777754433332111 0 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCC-eEEEEEEeCCeEEEEEecCcEE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNES-NVIDFKDHGDKVSVVLENGQCY 231 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~-~v~~i~~~~~~v~v~~~~g~~i 231 (328)
. +...... ...+.. ... .....+++..+...|.+.+ +.. +++.. .+.+++ ....
T Consensus 97 ~-~~~~~~~--~~~~~~-----~~~-~~~~~v~~~~l~~~L~~~~~~~Gv~-v~~~~v~~~~l~------------~~~~ 154 (430)
T 3ihm_A 97 Y-YYVGGPQ--PMRFYG-----DLK-APSRAVDYRLYQPMLMRALEARGGK-FCYDAVSAEDLE------------GLSE 154 (430)
T ss_dssp E-EEECSSS--CEEEEE-----EEE-EEEBEECHHHHHHHHHHHHHHTTCE-EEECCCCGGGHH------------HHHT
T ss_pred e-EEECCCC--ccccch-----hcC-CcceeecHHHHHHHHHHHHHHcCCE-EEEEecchhhhh------------hhcc
Confidence 0 0000000 111110 000 1236788988888887765 322 32211 111110 0123
Q ss_pred ecCEEEEccCCCchhhhhhcCCCC-----c-eEeeeEEEEEeeccCCCcccccceEEEecCCeEEEEEeC--CCCeEEEE
Q 020277 232 AGDLLVGADGIWSKVRKNLFGPQE-----A-IFSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDV--GAGKMQWY 303 (328)
Q Consensus 232 ~ad~VV~AdG~~S~vr~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~--~~g~~~~~ 303 (328)
++|+||+|||.+|.+|........ + .......+.++. +++.....+.++ ...+.++++|. .+|..+++
T Consensus 155 ~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~---~~~~~~~~~~~~-~~~G~~~~~p~~~~~g~~~~~ 230 (430)
T 3ihm_A 155 QYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIK---EAPIRAVTMSFS-PGHGELIEIPTLSFNGMSTAL 230 (430)
T ss_dssp TSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBC---CCSSCCEEEEEE-TTTEEEEEEEEEETTEEEEEE
T ss_pred cCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCC---CCCcCeeeeeec-CCCcceEEecccCCCcceEEE
Confidence 699999999999998754322111 1 112222233322 222222223333 34455666775 34566665
Q ss_pred EEEeCCC
Q 020277 304 AFNKEPA 310 (328)
Q Consensus 304 ~~~~~~~ 310 (328)
+....+.
T Consensus 231 ~~~~~~~ 237 (430)
T 3ihm_A 231 VLENHIG 237 (430)
T ss_dssp EEEECTT
T ss_pred EEEecCC
Confidence 5555543
No 46
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.37 E-value=2.3e-12 Score=120.69 Aligned_cols=65 Identities=14% Similarity=0.063 Sum_probs=45.3
Q ss_pred EEecHHHHHHHHHHhcC--CceEecCCeEE---------EEEEeCCeEEEEEecCcEEecCEEEEccCCCc-hhhh-hh
Q 020277 185 RVISRMTLQQILAKAVG--DEIILNESNVI---------DFKDHGDKVSVVLENGQCYAGDLLVGADGIWS-KVRK-NL 250 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~---------~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S-~vr~-~~ 250 (328)
..++...+.+.|.+.+. ...++++++|+ +++.+++++.|.+.+| +++||.||+|+|.+| .+++ .+
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~ 244 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGL 244 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHH
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhc
Confidence 46788888888887652 24477899999 8887777776665555 899999999999999 5666 54
No 47
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.37 E-value=9e-11 Score=112.98 Aligned_cols=112 Identities=15% Similarity=0.070 Sum_probs=69.0
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEEEEEe---cCc--EEecCEEEEccCCCchh-hhh-hcCCC-
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLE---NGQ--CYAGDLLVGADGIWSKV-RKN-LFGPQ- 254 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~---~g~--~i~ad~VV~AdG~~S~v-r~~-~~~~~- 254 (328)
..++...+...|.+.+ ....++.+++|++++.+++.+.|++. +|+ +++||.||.|+|.||.. ++. +....
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~ 223 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSP 223 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCS
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcc
Confidence 4578888888887764 22447889999999988776777774 565 79999999999999964 433 43221
Q ss_pred CceE--eeeEEEEEeeccCCCcccccceEEEe-cCCeEEEEEeCCCCeEEE
Q 020277 255 EAIF--SGYTCYTGIADFVPADIESVGYRVFL-GHKQYFVSSDVGAGKMQW 302 (328)
Q Consensus 255 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~P~~~g~~~~ 302 (328)
.+.. .+++.. ++. + .......++. .+++.++++|..+|.+.+
T Consensus 224 ~~i~p~rG~~~~---~~~-~--~~~~~~~~~~~~dg~~~~~~P~~~g~~~i 268 (501)
T 2qcu_A 224 YGIRLIKGSHIV---VPR-V--HTQKQAYILQNEDKRIVFVIPWMDEFSII 268 (501)
T ss_dssp SCBCCEEEEEEE---EEC-S--SSCSCEEEEECTTSCEEEEEEETTTEEEE
T ss_pred cccccceeEEEE---ECC-C--CCCceEEEeecCCCCEEEEEEcCCCcEEE
Confidence 2222 233222 111 1 1111122222 256678888998886443
No 48
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.37 E-value=1.8e-11 Score=115.58 Aligned_cols=62 Identities=10% Similarity=0.055 Sum_probs=51.0
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCC---eEEEEEEeCCeEE-EEEecCcEEecCEEEEccCCCchh
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNES---NVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~---~v~~i~~~~~~v~-v~~~~g~~i~ad~VV~AdG~~S~v 246 (328)
..++...+.+.|.+.+ ....+++++ +|++++.++++++ |++.+|++++||.||+|+|.+|.-
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~ 223 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQ 223 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhh
Confidence 4667778888887764 224478888 9999999888888 888888899999999999999863
No 49
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.35 E-value=6.2e-12 Score=119.40 Aligned_cols=165 Identities=17% Similarity=0.153 Sum_probs=89.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccce-eech--hHHHHHHhcCc--hHH-HHHHHhcc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPI-QIQS--NALAALEAIDL--DVA-EEVMRAGC 149 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~-~l~~--~~~~~l~~l~~--g~~-~~l~~~~~ 149 (328)
..+||+|||||++|+++|+.|+++|++|+|+|+.+...+.....+++. .+.. .....++.++. .+. ..+....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 103 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN- 103 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC-
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC-
Confidence 457999999999999999999999999999999864321110111111 0100 00112222210 000 0000000
Q ss_pred cccccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCe-EEEEEe
Q 020277 150 VTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK-VSVVLE 226 (328)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~ 226 (328)
. .....+... .+-.... . ..+..+........+.+.|.+.+ ....++++++|+++..++++ +.|++.
T Consensus 104 -~-~~~~~~~~~-~G~~~~~-~------~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~ 173 (447)
T 2i0z_A 104 -N-EDIITFFEN-LGVKLKE-E------DHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ 173 (447)
T ss_dssp -H-HHHHHHHHH-TTCCEEE-C------GGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred -H-HHHHHHHHh-cCCceEE-e------eCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC
Confidence 0 000000000 0000000 0 00000000012456666666654 23458889999999987777 678888
Q ss_pred cCcEEecCEEEEccCCCc-----------hhhhhhc
Q 020277 227 NGQCYAGDLLVGADGIWS-----------KVRKNLF 251 (328)
Q Consensus 227 ~g~~i~ad~VV~AdG~~S-----------~vr~~~~ 251 (328)
+|++++||.||+|+|.+| .+++.++
T Consensus 174 ~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G 209 (447)
T 2i0z_A 174 TGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAG 209 (447)
T ss_dssp TCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTT
T ss_pred CCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCC
Confidence 887899999999999999 6776664
No 50
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.32 E-value=8.6e-12 Score=120.81 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEE-EEEecCcEEecCEEEEccCCCch
Q 020277 188 SRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 188 ~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
....+.+.|.+.+ ....++++++|++++.+++++. |++.+|++++||.||+|+|.+|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 3455666665553 2345889999999998877655 88888989999999999999995
No 51
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.31 E-value=3.1e-11 Score=117.99 Aligned_cols=169 Identities=18% Similarity=0.165 Sum_probs=89.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCc-----hHHHHHHHhccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDL-----DVAEEVMRAGCV 150 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~-----g~~~~l~~~~~~ 150 (328)
..+||+|||+|++||++|+.|+++|++|+|+|+.+.....+...++++..... ...+.++. .+...+...+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGT--KQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCC--HHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 45799999999999999999999999999999987543222222333422211 11111110 001111110000
Q ss_pred cc--ccc----------cccccCCCCceEEeecCCchhhhcCCCeEE-----EecHHHHHHHHHHhc--CCceEecCCeE
Q 020277 151 TG--DRI----------NGLVDGISGSWYIKFDTFTPAAEKGLPVTR-----VISRMTLQQILAKAV--GDEIILNESNV 211 (328)
Q Consensus 151 ~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~r~~l~~~L~~~~--~~~~i~~~~~v 211 (328)
.. ..+ ..++.. .+-.+...... .....+..+ .+....+.+.|.+.+ ....++++++|
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~-~Gv~~~~~~~~---~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v 273 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLES-LGANLDDLKRS---GGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRV 273 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHH-TTCCCCEEECC---TTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHh-cCCcccccccc---CCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEE
Confidence 00 000 000000 00000000000 000011111 134666777776654 22348889999
Q ss_pred EEEEEeC-CeEE-EEEe--cCc--EEecCEEEEccCCCchhhhhh
Q 020277 212 IDFKDHG-DKVS-VVLE--NGQ--CYAGDLLVGADGIWSKVRKNL 250 (328)
Q Consensus 212 ~~i~~~~-~~v~-v~~~--~g~--~i~ad~VV~AdG~~S~vr~~~ 250 (328)
+++..++ +++. |.+. +|+ +++||.||+|+|.+|..++.+
T Consensus 274 ~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 274 VKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 9999877 6543 4443 675 689999999999999876644
No 52
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.29 E-value=6.5e-11 Score=105.53 Aligned_cols=137 Identities=16% Similarity=0.198 Sum_probs=84.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCeEEEEccCCccccCCCcccc---ceeechhHHHHHHhcCchHHHHHHHhcccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYRG---PIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~-g~~v~~~~~~~~~~~~~g~~~~---~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~ 151 (328)
..+||+|||||++|+++|+.|+++ |.+|+|+|+.+.........++ .+.+.....+.|+.++ ...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G-----------~~~ 106 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIG-----------VAY 106 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHT-----------CCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcC-----------CCc
Confidence 357999999999999999999997 9999999998653211111000 1222222233333221 100
Q ss_pred cccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc-C--CceEecCCeEEEEEEeCCeEE-EEEe-
Q 020277 152 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV-G--DEIILNESNVIDFKDHGDKVS-VVLE- 226 (328)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~-~--~~~i~~~~~v~~i~~~~~~v~-v~~~- 226 (328)
. ..+. +....++.++...|.+.+ . ...++++++|+++..+++.+. +.+.
T Consensus 107 -------~--~~~~-----------------~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~ 160 (284)
T 1rp0_A 107 -------D--EQDT-----------------YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNW 160 (284)
T ss_dssp -------E--ECSS-----------------EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEE
T ss_pred -------c--cCCC-----------------EEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEec
Confidence 0 0000 111225666666666654 2 345888999999998877653 3332
Q ss_pred --------cC-----cEEecCEEEEccCCCchhhhh
Q 020277 227 --------NG-----QCYAGDLLVGADGIWSKVRKN 249 (328)
Q Consensus 227 --------~g-----~~i~ad~VV~AdG~~S~vr~~ 249 (328)
+| .+++||.||+|+|.+|.++..
T Consensus 161 ~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 161 ALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp HHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred cccccccCccccCceEEEECCEEEECCCCchHHHHH
Confidence 32 579999999999999987653
No 53
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.28 E-value=7e-11 Score=115.55 Aligned_cols=163 Identities=13% Similarity=0.135 Sum_probs=87.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcC------------------
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAID------------------ 137 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~------------------ 137 (328)
..+||+|||+|++||++|+.|+++|++|+|+|+.+.....+...++++....+ ...+.++
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWT--DQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCC--HHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 46799999999999999999999999999999986532222222333432221 1111111
Q ss_pred ---chHHHHHHHhcccccccccccccCCCCceEEeecCCchhhhcCCCeEEE-----ecHHHHHHHHHHhc--CCceEec
Q 020277 138 ---LDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRV-----ISRMTLQQILAKAV--GDEIILN 207 (328)
Q Consensus 138 ---~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~r~~l~~~L~~~~--~~~~i~~ 207 (328)
..+...+.+....... ++.. .+-.+...... .....+.... .....+.+.|.+.+ ....+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~----~l~~-~Gv~~~~~~~~---~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~ 274 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVD----WMTA-MGADLTDVGMM---GGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRM 274 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHH----HHHH-TTCCCCEEECC---TTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEES
T ss_pred CCCHHHHHHHHHccHHHHH----HHHh-cCCCCccCccc---CCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEe
Confidence 0011111100000000 0000 00000000000 0000111111 23456777776654 2345889
Q ss_pred CCeEEEEEEeC-CeEE-EEEe--cCc--EEecCEEEEccCCCchhhh
Q 020277 208 ESNVIDFKDHG-DKVS-VVLE--NGQ--CYAGDLLVGADGIWSKVRK 248 (328)
Q Consensus 208 ~~~v~~i~~~~-~~v~-v~~~--~g~--~i~ad~VV~AdG~~S~vr~ 248 (328)
+++|+++..++ +++. +.+. +|+ +++||.||+|+|.+|..++
T Consensus 275 ~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 275 NTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred CCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHH
Confidence 99999999876 5543 4443 665 7899999999999997554
No 54
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.28 E-value=4.5e-11 Score=113.26 Aligned_cols=66 Identities=18% Similarity=0.320 Sum_probs=49.0
Q ss_pred EEEecHHHHHHHHHHhc--CCceEecCCeEEEEEE---------------eCCeE-EEEEecCcEE--ecCEEEEccCCC
Q 020277 184 TRVISRMTLQQILAKAV--GDEIILNESNVIDFKD---------------HGDKV-SVVLENGQCY--AGDLLVGADGIW 243 (328)
Q Consensus 184 ~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~---------------~~~~v-~v~~~~g~~i--~ad~VV~AdG~~ 243 (328)
...++...+.+.|.+.+ ....++++++|++++. +++++ .|.+.+| ++ +||.||.|+|.+
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 34567778888887765 2244778999999987 55554 5666666 68 999999999999
Q ss_pred ch-hhhhh
Q 020277 244 SK-VRKNL 250 (328)
Q Consensus 244 S~-vr~~~ 250 (328)
|. +.+.+
T Consensus 254 s~~l~~~~ 261 (448)
T 3axb_A 254 SNRLLNPL 261 (448)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHc
Confidence 87 44444
No 55
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.24 E-value=3.7e-11 Score=112.39 Aligned_cols=142 Identities=19% Similarity=0.166 Sum_probs=81.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCcccccee------ech--------h-HHHHHHhcCc-hH
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ------IQS--------N-ALAALEAIDL-DV 140 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~------l~~--------~-~~~~l~~l~~-g~ 140 (328)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.........+++.. ..+ . ....+..++. .+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 579999999999999999999999999999998643110000000000 000 0 0111222210 01
Q ss_pred HHHHHHhcccccccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEe
Q 020277 141 AEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDH 217 (328)
Q Consensus 141 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~ 217 (328)
.+.+...+... .....+.. . | .. .+.++.+.|.+.+ +. .++++++|+++..+
T Consensus 84 ~~~~~~~Gi~~-------~~~~~g~~-~-------------p--~~-~~~~l~~~L~~~~~~~Gv-~i~~~~~v~~i~~~ 138 (401)
T 2gqf_A 84 ISLVAEQGITY-------HEKELGQL-F-------------C--DE-GAEQIVEMLKSECDKYGA-KILLRSEVSQVERI 138 (401)
T ss_dssp HHHHHHTTCCE-------EECSTTEE-E-------------E--TT-CTHHHHHHHHHHHHHHTC-EEECSCCEEEEEEC
T ss_pred HHHHHhCCCce-------EECcCCEE-c-------------c--CC-CHHHHHHHHHHHHHHCCC-EEEeCCEEEEEEcc
Confidence 11111111100 00000000 0 0 01 4556666666554 43 48889999999876
Q ss_pred ----CCeEEEEEecCcEEecCEEEEccCCCc
Q 020277 218 ----GDKVSVVLENGQCYAGDLLVGADGIWS 244 (328)
Q Consensus 218 ----~~~v~v~~~~g~~i~ad~VV~AdG~~S 244 (328)
++++.+++.++ +++||.||+|+|.+|
T Consensus 139 ~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 139 QNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred cCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 56688877666 799999999999999
No 56
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.24 E-value=2.3e-10 Score=111.84 Aligned_cols=37 Identities=27% Similarity=0.503 Sum_probs=33.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCcc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~ 112 (328)
..++|+|||+|++||++|+.|+++|++|+|+|+.+..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3579999999999999999999999999999998653
No 57
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.24 E-value=1.7e-11 Score=111.91 Aligned_cols=128 Identities=16% Similarity=0.311 Sum_probs=82.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+|||||++|+++|..|+++|++|+|+|+.+.. .|.+. + .+ . ...........
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~---gg~~~-------~------~~--~------~~~~~~~~~~~ 58 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASP---GGAWQ-------H------AW--H------SLHLFSPAGWS 58 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSS---SGGGG-------G------SC--T------TCBCSSCGGGS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC---CCccc-------C------CC--C------CcEecCchhhh
Confidence 479999999999999999999999999999998642 11100 0 00 0 00000000000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEE-EEEecCcEEe
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLENGQCYA 232 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~ 232 (328)
. +...... ... ....++.++.+.|.+.+ +.. ++++++|++++.+++.+. +++.+| +++
T Consensus 59 ~------------~~~~~~~--~~~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~v~~~~g-~~~ 120 (357)
T 4a9w_A 59 S------------IPGWPMP--ASQ--GPYPARAEVLAYLAQYEQKYALP-VLRPIRVQRVSHFGERLRVVARDGR-QWL 120 (357)
T ss_dssp C------------CSSSCCC--CCS--SSSCBHHHHHHHHHHHHHHTTCC-EECSCCEEEEEEETTEEEEEETTSC-EEE
T ss_pred h------------CCCCCCC--CCc--cCCCCHHHHHHHHHHHHHHcCCE-EEcCCEEEEEEECCCcEEEEEeCCC-EEE
Confidence 0 0000000 000 12345677777766543 444 888999999999999998 887777 899
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||+|+|.+|..
T Consensus 121 ~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 121 ARAVISATGTWGEA 134 (357)
T ss_dssp EEEEEECCCSGGGB
T ss_pred eCEEEECCCCCCCC
Confidence 99999999998743
No 58
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.23 E-value=1.7e-10 Score=104.89 Aligned_cols=138 Identities=14% Similarity=0.180 Sum_probs=83.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCccccCCC---ccccceeechhHHHHHHhcCchHHHHHHHhccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEG---QYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~~~~~~g---~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~ 150 (328)
..+||+|||||++||++|+.|+++ |++|+|+|+......+.. .......+.+...+.|+.++..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~----------- 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVP----------- 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCC-----------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCc-----------
Confidence 357999999999999999999997 999999999864321111 0001122334444444443110
Q ss_pred ccccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCC--------
Q 020277 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGD-------- 219 (328)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~-------- 219 (328)
. . ..+. +....+..++.+.|.+.+ ....++++++|+++..+++
T Consensus 147 ~-------~--~~G~-----------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~ 200 (344)
T 3jsk_A 147 Y-------E--DEGD-----------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSS 200 (344)
T ss_dssp C-------E--ECSS-----------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------
T ss_pred c-------c--ccCC-----------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccc
Confidence 0 0 0011 111223455666666653 2345788999999987652
Q ss_pred -----------eEE-EEEe--------------cCcEEecCEEEEccCCCchhhhhh
Q 020277 220 -----------KVS-VVLE--------------NGQCYAGDLLVGADGIWSKVRKNL 250 (328)
Q Consensus 220 -----------~v~-v~~~--------------~g~~i~ad~VV~AdG~~S~vr~~~ 250 (328)
.+. +... +..+++|++||+|||..|.+++.+
T Consensus 201 ~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 201 DDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp --------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred cccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 332 2221 234799999999999999865443
No 59
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.23 E-value=2.7e-11 Score=114.89 Aligned_cols=61 Identities=16% Similarity=0.113 Sum_probs=48.7
Q ss_pred EecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEec---Cc---EEecCEEEEccCCCchh
Q 020277 186 VISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLEN---GQ---CYAGDLLVGADGIWSKV 246 (328)
Q Consensus 186 ~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~---g~---~i~ad~VV~AdG~~S~v 246 (328)
..++.++.+.|.+.+. ...++++++|++++.++++|+|++.+ |+ ++.+|.||+|+|.+|.-
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 4567888888766542 23478899999999988889888876 66 79999999999998754
No 60
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.22 E-value=1.4e-10 Score=100.24 Aligned_cols=125 Identities=18% Similarity=0.210 Sum_probs=83.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcC-chHHHHHHHhccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAID-LDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~-~g~~~~l~~~~~~~~~~ 154 (328)
+.++|+|||||++|+++|..|+++|.+|+|+|+..... | ....+.. ..+. ..+.+++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~---G-----~~~~~~~----~~~~~~~~~~~~~--------- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV---M-----MPFLPPK----PPFPPGSLLERAY--------- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT---T-----CCSSCCC----SCCCTTCHHHHHC---------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC---C-----cccCccc----cccchhhHHhhhc---------
Confidence 35799999999999999999999999999999984311 1 1111100 0000 00111100
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeE-EEEEecCcE
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKV-SVVLENGQC 230 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~ 230 (328)
+ ..+ + ++..+.+.|.+.+ +...++ +++|+++..+++++ .+.+.+|.+
T Consensus 61 ----------------d------~~g-~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~ 111 (232)
T 2cul_A 61 ----------------D------PKD-E-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP 111 (232)
T ss_dssp ----------------C------TTC-C-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC
T ss_pred ----------------c------CCC-C-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE
Confidence 0 001 1 5667777776654 233355 57999999887775 477788889
Q ss_pred EecCEEEEccCCCchhhhhh
Q 020277 231 YAGDLLVGADGIWSKVRKNL 250 (328)
Q Consensus 231 i~ad~VV~AdG~~S~vr~~~ 250 (328)
++||+||.|+|.+|..+..+
T Consensus 112 i~a~~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 112 ARGEKVVLAVGSFLGARLFL 131 (232)
T ss_dssp EECSEEEECCTTCSSCEEEE
T ss_pred EECCEEEECCCCChhhceec
Confidence 99999999999999888654
No 61
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.22 E-value=7.5e-11 Score=97.58 Aligned_cols=112 Identities=27% Similarity=0.321 Sum_probs=79.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccccc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~~ 157 (328)
++|+|||||++|+.+|..|++.|.+|+|+|+.+....... .+..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~------------------------------------~~~~ 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS------------------------------------RVPN 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS------------------------------------CCCC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch------------------------------------hhhc
Confidence 5899999999999999999999999999999863110000 0000
Q ss_pred cccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEEEEEecCcEEecC
Q 020277 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (328)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad 234 (328)
+ . +.| ..+...++.+.|.+.+ +. .++++ +|++++.+++++.+++.+| ++++|
T Consensus 46 ~------------~--------~~~--~~~~~~~~~~~l~~~~~~~gv-~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad 100 (180)
T 2ywl_A 46 Y------------P--------GLL--DEPSGEELLRRLEAHARRYGA-EVRPG-VVKGVRDMGGVFEVETEEG-VEKAE 100 (180)
T ss_dssp S------------T--------TCT--TCCCHHHHHHHHHHHHHHTTC-EEEEC-CCCEEEECSSSEEEECSSC-EEEEE
T ss_pred c------------C--------CCc--CCCCHHHHHHHHHHHHHHcCC-EEEeC-EEEEEEEcCCEEEEEECCC-EEEEC
Confidence 0 0 000 0123445555555443 43 47778 9999998877888888888 89999
Q ss_pred EEEEccCCCchhhhhh
Q 020277 235 LLVGADGIWSKVRKNL 250 (328)
Q Consensus 235 ~VV~AdG~~S~vr~~~ 250 (328)
.||.|+|.++.+++.+
T Consensus 101 ~vI~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 101 RLLLCTHKDPTLPSLL 116 (180)
T ss_dssp EEEECCTTCCHHHHHH
T ss_pred EEEECCCCCCCccccC
Confidence 9999999999887766
No 62
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.20 E-value=9.5e-11 Score=107.67 Aligned_cols=120 Identities=16% Similarity=0.254 Sum_probs=82.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+|+++|..|+++|++|+|+|+.+.. + +.+... . +....
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~----~-~~~~~ 62 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL----G---------------------GQLAAL----Y-PEKHI 62 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHT----C-TTSEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC----C---------------------Cccccc----C-CCccc
Confidence 3579999999999999999999999999999997531 1 111100 0 00000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCC-eEEEEEecCcEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i~ 232 (328)
++ .. +.+ .+.+.++.+.|.+.+. ...++++++|++++.+++ .+++++.+|.+++
T Consensus 63 ---~~---------~~--------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 119 (360)
T 3ab1_A 63 ---YD---------VA--------GFP---EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYR 119 (360)
T ss_dssp ---CC---------ST--------TCS---SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred ---cc---------CC--------CCC---CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEE
Confidence 00 00 111 2445666666655541 234778999999998765 7888888888999
Q ss_pred cCEEEEccCCCchhhh
Q 020277 233 GDLLVGADGIWSKVRK 248 (328)
Q Consensus 233 ad~VV~AdG~~S~vr~ 248 (328)
+|.||+|+|.+|..++
T Consensus 120 ~~~li~AtG~~~~~~~ 135 (360)
T 3ab1_A 120 SRAVLIAAGLGAFEPR 135 (360)
T ss_dssp EEEEEECCTTCSCCBC
T ss_pred eeEEEEccCCCcCCCC
Confidence 9999999999875443
No 63
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.19 E-value=1.1e-10 Score=106.08 Aligned_cols=119 Identities=18% Similarity=0.269 Sum_probs=81.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
+.++|+|||||++|+++|..|+++|++|+|+|+.+.. + +.+... . +...+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~----~-~~~~~ 53 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP----G---------------------GQLTAL----Y-PEKYI 53 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS----C---------------------HHHHHT----C-TTSEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Ceeecc----C-CCcee
Confidence 3579999999999999999999999999999998531 1 111000 0 00000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEecCcEEec
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (328)
++ .. +.+ .+.+.++.+.|.+.+. ...++++++|++++.+++.+++.+.+|.++++
T Consensus 54 ---~~---------~~--------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~ 110 (335)
T 2zbw_A 54 ---YD---------VA--------GFP---KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTA 110 (335)
T ss_dssp ---CC---------ST--------TCS---SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEE
T ss_pred ---ec---------cC--------CCC---CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEe
Confidence 00 00 111 2345566666655432 13467799999999887788888888888999
Q ss_pred CEEEEccCCCchhh
Q 020277 234 DLLVGADGIWSKVR 247 (328)
Q Consensus 234 d~VV~AdG~~S~vr 247 (328)
|.||+|+|.+|...
T Consensus 111 ~~lv~AtG~~~~~p 124 (335)
T 2zbw_A 111 KAVIIAAGVGAFEP 124 (335)
T ss_dssp EEEEECCTTSEEEE
T ss_pred CEEEECCCCCCCCC
Confidence 99999999976443
No 64
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.19 E-value=1.8e-10 Score=112.79 Aligned_cols=154 Identities=16% Similarity=0.231 Sum_probs=90.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceee--chhHHHHHHhcCchHHHHHHHhcccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQI--QSNALAALEAIDLDVAEEVMRAGCVTGD 153 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l--~~~~~~~l~~l~~g~~~~l~~~~~~~~~ 153 (328)
..+||+|||||++|+++|+.|++.|.+|+|+|+........+ +...+.. .....+.++.++. .......... .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~-Cnps~ggia~~~lv~ei~algg-~~~~~~d~~g---i 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMS-CNPAIGGIGKGHLVKEVDALGG-LMAKAIDQAG---I 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS-SSSEEESTTHHHHHHHHHHTTC-SHHHHHHHHE---E
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccc-ccccccchhhHHHHHHHHHhcc-HHHHHhhhcc---c
Confidence 458999999999999999999999999999999742111111 1001111 1122333333321 1111111100 0
Q ss_pred cccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC---CceEecCCeEEEEEEeCCeE-EEEEecCc
Q 020277 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQ 229 (328)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v-~v~~~~g~ 229 (328)
.+. ........ .. ......+++..+.+.|.+.+. ...+ ++.+|+++..+++.+ .|.+.+|.
T Consensus 102 ~f~------------~l~~~kgp-av-~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~ 166 (651)
T 3ces_A 102 QFR------------ILNASKGP-AV-RATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGL 166 (651)
T ss_dssp EEE------------EESTTSCG-GG-CEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSE
T ss_pred chh------------hhhcccCc-cc-ccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCC
Confidence 000 00000000 00 011246788888887776652 2334 467999998877766 57777888
Q ss_pred EEecCEEEEccCCCchhhhh
Q 020277 230 CYAGDLLVGADGIWSKVRKN 249 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~vr~~ 249 (328)
+++||.||+|+|.+|..+..
T Consensus 167 ~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 167 KFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp EEEEEEEEECCSTTTCCEEE
T ss_pred EEECCEEEEcCCCCccCccc
Confidence 99999999999999877654
No 65
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.18 E-value=5.1e-10 Score=114.08 Aligned_cols=74 Identities=19% Similarity=0.351 Sum_probs=54.5
Q ss_pred EEecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEE-EEEecCcEEecCEEEEccCCCchhhhhhcCCCCceEe
Q 020277 185 RVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSKVRKNLFGPQEAIFS 259 (328)
Q Consensus 185 ~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~ad~VV~AdG~~S~vr~~~~~~~~~~~~ 259 (328)
..+++..+.+.|.+.+ ....++.+++|++++.+++++. |.+.+| +++||.||.|+|.+|.....+.+...+...
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~pl~p 222 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVPLLP 222 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCCCEE
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCcccee
Confidence 4668888888887765 2244788999999998888764 666555 899999999999999765444444444443
No 66
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.18 E-value=1.1e-10 Score=103.84 Aligned_cols=111 Identities=20% Similarity=0.243 Sum_probs=77.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+|||||++|+++|..|+++|++|+|+|+......-. . ...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~----------------------~--------------~~~ 45 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFA----------------------S--------------HSH 45 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGC----------------------S--------------CCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccc----------------------h--------------hhc
Confidence 3799999999999999999999999999999875210000 0 000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCC--ceEecCCeEEEEEEeCCeEEEEEecCcEEecC
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad 234 (328)
.+. + .......++.+.+.+.+.. ...+...+|++++.+++++.+.+.+|+++++|
T Consensus 46 ~~~--------------------~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d 102 (297)
T 3fbs_A 46 GFL--------------------G---QDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAG 102 (297)
T ss_dssp SST--------------------T---CTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred CCc--------------------C---CCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcC
Confidence 000 0 0123345555555555422 22233569999999888899999999999999
Q ss_pred EEEEccCCCchh
Q 020277 235 LLVGADGIWSKV 246 (328)
Q Consensus 235 ~VV~AdG~~S~v 246 (328)
.||+|+|.++..
T Consensus 103 ~vviAtG~~~~~ 114 (297)
T 3fbs_A 103 RLILAMGVTDEL 114 (297)
T ss_dssp EEEECCCCEEEC
T ss_pred EEEECCCCCCCC
Confidence 999999997654
No 67
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.17 E-value=3.2e-10 Score=110.92 Aligned_cols=151 Identities=17% Similarity=0.234 Sum_probs=89.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeec--hhHHHHHHhcCchHHHHHHH-hccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQ--SNALAALEAIDLDVAEEVMR-AGCVTG 152 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~--~~~~~~l~~l~~g~~~~l~~-~~~~~~ 152 (328)
..+||+|||||++|+++|+.|++.|.+|+|+|+........+ +....... ...++.++.++ ++...... .+.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~-c~ps~gGia~~~lv~el~al~-g~~~~~~d~~gi--- 94 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMS-CNPAIGGVAKGQITREIDALG-GEMGKAIDATGI--- 94 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS-SCSEEECHHHHHHHHHHHHHT-CSHHHHHHHHEE---
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCc-cccchhhhhHHHHHHHHHhcc-cHHHHHHHhcCC---
Confidence 458999999999999999999999999999999742211111 00011100 11222222221 11111111 110
Q ss_pred ccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC---CceEecCCeEEEEEEeCCeEE-EEEecC
Q 020277 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKVS-VVLENG 228 (328)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v~-v~~~~g 228 (328)
.+. ...... ..........+++..+.+.|.+.+. ...++ +.+|+++..+++.+. |.+.+|
T Consensus 95 -~f~------------~l~~~k--gpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G 158 (641)
T 3cp8_A 95 -QFR------------MLNRSK--GPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSG 158 (641)
T ss_dssp -EEE------------EECSSS--CTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTS
T ss_pred -chh------------hccccc--CccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCC
Confidence 000 000000 0000011246788888888877652 33344 569999988888877 778888
Q ss_pred cEEecCEEEEccCCCchhh
Q 020277 229 QCYAGDLLVGADGIWSKVR 247 (328)
Q Consensus 229 ~~i~ad~VV~AdG~~S~vr 247 (328)
.+++||.||+|+|.++..+
T Consensus 159 ~~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 159 RAIQAKAAILACGTFLNGL 177 (641)
T ss_dssp CEEEEEEEEECCTTCBTCE
T ss_pred cEEEeCEEEECcCCCCCcc
Confidence 8999999999999997654
No 68
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.16 E-value=3.5e-10 Score=110.36 Aligned_cols=153 Identities=17% Similarity=0.229 Sum_probs=90.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceee--chhHHHHHHhcCchHHHHHHHhcccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQI--QSNALAALEAIDLDVAEEVMRAGCVTGD 153 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l--~~~~~~~l~~l~~g~~~~l~~~~~~~~~ 153 (328)
..+||+|||||+||++||+.|++.|.+|+|+|+........+ +...+.. .....+.++.++ +.+........ .
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~-Cnps~GGia~g~lv~eldalg-g~~~~~~d~~g---i 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS-CNPAIGGIAKGIVVREIDALG-GEMGKAIDQTG---I 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC-SCSEEECTTHHHHHHHHHHHT-CSHHHHHHHHE---E
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC-ccccccccchHHHHHHHHHhh-hHHHHHhhhcc---c
Confidence 358999999999999999999999999999999742111110 0000110 112223333332 11122111100 0
Q ss_pred cccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC---CceEecCCeEEEEEEeCCeEE-EEEecCc
Q 020277 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKVS-VVLENGQ 229 (328)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v~-v~~~~g~ 229 (328)
.+. ......+. . .......+++..+.+.|.+.+. ...+ ++.+|+++..+++.+. |.+.+|.
T Consensus 101 ~f~-~l~~~kGp------------a-v~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~ 165 (637)
T 2zxi_A 101 QFK-MLNTRKGK------------A-VQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGV 165 (637)
T ss_dssp EEE-EESTTSCG------------G-GCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSC
T ss_pred cee-ecccccCc------------c-ccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCc
Confidence 000 00000000 0 0011246788888888777652 2334 4689999988777764 7788888
Q ss_pred EEecCEEEEccCCCchhhh
Q 020277 230 CYAGDLLVGADGIWSKVRK 248 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~vr~ 248 (328)
++.|+.||+|+|.++..+.
T Consensus 166 ~i~AdaVVLATG~~s~~~~ 184 (637)
T 2zxi_A 166 EYKTKAVVVTTGTFLNGVI 184 (637)
T ss_dssp EEECSEEEECCTTCBTCEE
T ss_pred EEEeCEEEEccCCCccCce
Confidence 9999999999999887654
No 69
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.15 E-value=9.2e-11 Score=113.98 Aligned_cols=136 Identities=20% Similarity=0.122 Sum_probs=83.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||||++|+++|..|++.|++|+|+|+.+.. .| .+.. . ..+....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~---GG----------------------~w~~---~-~~pg~~~ 65 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV---GG----------------------VWYW---N-RYPGARC 65 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS---CT----------------------HHHH---C-CCTTCBC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC---CC----------------------cccc---c-CCCceee
Confidence 4679999999999999999999999999999998642 11 1100 0 0000000
Q ss_pred cccccCCCCceEEeecCCch-hhhcCCCeEEEecHHHHHHHHHHh---cCC-ceEecCCeEEEEEEeCC--eEEEEEecC
Q 020277 156 NGLVDGISGSWYIKFDTFTP-AAEKGLPVTRVISRMTLQQILAKA---VGD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~---~~~-~~i~~~~~v~~i~~~~~--~v~v~~~~g 228 (328)
+.. .....+..... ......+ .....+.++.+.|.+. .+. ..++++++|++++.+++ .|+|++.+|
T Consensus 66 ----d~~--~~~~~~~f~~~~~~~~~~~-~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G 138 (542)
T 1w4x_A 66 ----DIE--SIEYCYSFSEEVLQEWNWT-ERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG 138 (542)
T ss_dssp ----SSC--TTTSSCCSCHHHHHHCCCC-BSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC
T ss_pred ----ccc--ccccccccChhhhhccCcc-cccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC
Confidence 000 00000000000 0000111 1234567777766543 332 34888999999988654 789999899
Q ss_pred cEEecCEEEEccCCCchhh
Q 020277 229 QCYAGDLLVGADGIWSKVR 247 (328)
Q Consensus 229 ~~i~ad~VV~AdG~~S~vr 247 (328)
++++||.||+|+|.+|..+
T Consensus 139 ~~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 139 DRIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp CEEEEEEEEECCCSCCCCC
T ss_pred CEEEeCEEEECcCCCCCCC
Confidence 8999999999999988544
No 70
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.15 E-value=1.4e-10 Score=110.47 Aligned_cols=149 Identities=21% Similarity=0.228 Sum_probs=83.5
Q ss_pred CeEEEECCChHHHHHHHHHHH---CCCe---EEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccc
Q 020277 78 LRILVAGGGIGGLVFALAAKR---KGFE---VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~---~g~~---v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~ 151 (328)
++|+||||||+||++|..|++ .|++ |+|||+.+.. .|. ....+.. . +... + ...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~---GG~----w~~~~~~-g-~~~~--g---------~~~ 62 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADW---GGQ----WNYTWRT-G-LDEN--G---------EPV 62 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSS---CGG----GSCCSCC-S-BCTT--S---------SBC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCC---CCE----eecCCCC-C-cccc--C---------CCC
Confidence 699999999999999999999 9999 9999998542 111 0000000 0 0000 0 000
Q ss_pred cccc-cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCc-eEecCCeEEEEEEeCC--eEEEE
Q 020277 152 GDRI-NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDE-IILNESNVIDFKDHGD--KVSVV 224 (328)
Q Consensus 152 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~-~i~~~~~v~~i~~~~~--~v~v~ 224 (328)
...+ ..+.. ........+.........+......+++.++.+.|.+.+ +.. .++++++|++++.+++ .|+|+
T Consensus 63 ~~~~y~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~ 141 (464)
T 2xve_A 63 HSSMYRYLWS-NGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVT 141 (464)
T ss_dssp CCCCCTTCBC-SSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEE
T ss_pred cCccccchhh-cCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEE
Confidence 0000 00000 000000011111111111101113456777777776543 432 3788999999998766 78888
Q ss_pred Eec---C--cEEecCEEEEccCCCchhh
Q 020277 225 LEN---G--QCYAGDLLVGADGIWSKVR 247 (328)
Q Consensus 225 ~~~---g--~~i~ad~VV~AdG~~S~vr 247 (328)
+.+ | .++.+|.||+|+|.+|..+
T Consensus 142 ~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 142 VQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred EEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 765 4 5789999999999877554
No 71
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.14 E-value=2.3e-10 Score=102.72 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=32.5
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.++.+||+|||||||||+||+.|+++|++|+|+|+..
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3567899999999999999999999999999999874
No 72
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.14 E-value=4.8e-10 Score=102.32 Aligned_cols=145 Identities=18% Similarity=0.151 Sum_probs=82.3
Q ss_pred CeEEEECCChHHHHHHHHHHH---CCCeEEEEccCCccccCCCcc----------cc---ceeechhHHHHHHhcCchHH
Q 020277 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQY----------RG---PIQIQSNALAALEAIDLDVA 141 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~---~g~~v~~~~~~~~~~~~~g~~----------~~---~~~l~~~~~~~l~~l~~g~~ 141 (328)
++|+|||||++|+++|+.|++ .|++|+|||+........... .. .+...+.....+. .+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~----~~~ 77 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQ----RFY 77 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTH----HHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHH----HHH
Confidence 489999999999999999999 999999999985321100000 00 0111111111111 122
Q ss_pred HHHHHhcccccccccccccCCCCceEEeecCCchhhhcCCCeEEEe--cHHHHHHHHHHhcCCceEecCCeEEEEEEeCC
Q 020277 142 EEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVI--SRMTLQQILAKAVGDEIILNESNVIDFKDHGD 219 (328)
Q Consensus 142 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~ 219 (328)
+.+...+.... +.....+.. ..+ + ...+.. .-..+.+.|.+.++. .++++++|++|+.+++
T Consensus 78 ~~~~~~g~~~~-----~~~~~~~~~--~~~--------~-~~~~~~~~g~~~l~~~l~~~~g~-~i~~~~~V~~i~~~~~ 140 (342)
T 3qj4_A 78 DELLAYGVLRP-----LSSPIEGMV--MKE--------G-DCNFVAPQGISSIIKHYLKESGA-EVYFRHRVTQINLRDD 140 (342)
T ss_dssp HHHHHTTSCEE-----CCSCEETCC--C----------C-CEEEECTTCTTHHHHHHHHHHTC-EEESSCCEEEEEECSS
T ss_pred HHHHhCCCeec-----Cchhhccee--ccC--------C-ccceecCCCHHHHHHHHHHhcCC-EEEeCCEEEEEEEcCC
Confidence 23322221100 000000000 000 0 000110 113455566666654 4889999999999989
Q ss_pred eEEEEEecCcEEecCEEEEccCCC
Q 020277 220 KVSVVLENGQCYAGDLLVGADGIW 243 (328)
Q Consensus 220 ~v~v~~~~g~~i~ad~VV~AdG~~ 243 (328)
+|+|++.+|+++++|.||.|....
T Consensus 141 ~~~v~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 141 KWEVSKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp SEEEEESSSCCEEESEEEECSCHH
T ss_pred EEEEEECCCCEEEcCEEEECCCHH
Confidence 999999999889999999998753
No 73
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.14 E-value=1.2e-10 Score=112.97 Aligned_cols=136 Identities=19% Similarity=0.231 Sum_probs=85.5
Q ss_pred CCCeEEEECCChHHHHHHHHHH-HCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAK-RKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~-~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
..++|+|||||++|+++|..|+ +.|++|+|+|+.+.. .|. +..-.-.+......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~---GGt----------------------w~~~~ypg~~~d~~ 61 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP---GGT----------------------WYWNRYPGALSDTE 61 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS---CTH----------------------HHHCCCTTCEEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC---CCc----------------------ccccCCCCceecCC
Confidence 4579999999999999999999 899999999998531 110 00000000000000
Q ss_pred ccccccCCCCceEEeecCCc-hhhhcCCCeEEEecHHHHHHHHHHhc---CC-ceEecCCeEEEEEEeCC--eEEEEEec
Q 020277 155 INGLVDGISGSWYIKFDTFT-PAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLEN 227 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~i~~~~~--~v~v~~~~ 227 (328)
.. .. .+.... .....+.. .....+.++.+.|.+.+ +. ..++++++|++++.+++ .|+|++.+
T Consensus 62 s~-~~---------~~~~~~~~~~~~~~~-~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 130 (540)
T 3gwf_A 62 SH-LY---------RFSFDRDLLQESTWK-TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH 130 (540)
T ss_dssp GG-GS---------SCCSCHHHHHHCCCS-BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT
T ss_pred cc-ee---------eeccccccccCCCCc-ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC
Confidence 00 00 000000 00011111 13567777777776543 43 25888999999998766 78999999
Q ss_pred CcEEecCEEEEccCCCchhh
Q 020277 228 GQCYAGDLLVGADGIWSKVR 247 (328)
Q Consensus 228 g~~i~ad~VV~AdG~~S~vr 247 (328)
|++++||.||+|+|.+|.-+
T Consensus 131 G~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 131 GEVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp SCEEEEEEEEECCCSCCSBC
T ss_pred CCEEEeCEEEECCcccccCC
Confidence 99999999999999887543
No 74
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.13 E-value=8.5e-10 Score=107.81 Aligned_cols=65 Identities=17% Similarity=0.269 Sum_probs=45.2
Q ss_pred EecHHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEE-EEEe---cCc--EEecCEEEEccCCCchhhhhh
Q 020277 186 VISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLE---NGQ--CYAGDLLVGADGIWSKVRKNL 250 (328)
Q Consensus 186 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~---~g~--~i~ad~VV~AdG~~S~vr~~~ 250 (328)
.++...+...|.+.+ ....++.+++|+++..+++++. |++. +|+ +++||.||.|+|.||.--..+
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~ 256 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNL 256 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTT
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHh
Confidence 456667766666543 2234788999999998887643 5543 343 799999999999998543333
No 75
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.12 E-value=1.7e-10 Score=112.14 Aligned_cols=136 Identities=18% Similarity=0.153 Sum_probs=84.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||||++|+++|..|++.|++|+|+|+.+.. .| .+..-.-.+.......
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~---GG----------------------tw~~~~ypg~~~dv~s 74 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV---GG----------------------VWYWNRYPGARCDVES 74 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS---CT----------------------HHHHCCCTTCBCSSCT
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC---CC----------------------ccccCCCCCceeCCCc
Confidence 4579999999999999999999999999999997531 11 0000000000000000
Q ss_pred cccccCCCCceEEeecCCch-hhhcCCCeEEEecHHHHHHHHHHh---cCC-ceEecCCeEEEEEEeCC--eEEEEEecC
Q 020277 156 NGLVDGISGSWYIKFDTFTP-AAEKGLPVTRVISRMTLQQILAKA---VGD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~---~~~-~~i~~~~~v~~i~~~~~--~v~v~~~~g 228 (328)
. . ..+..... ....... .....+.++.+.|.+. .+. ..++++++|++++.+++ .|+|++.+|
T Consensus 75 ~-~---------y~~~f~~~~~~~~~~~-~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G 143 (549)
T 4ap3_A 75 I-D---------YSYSFSPELEQEWNWS-EKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG 143 (549)
T ss_dssp T-T---------SSCCSCHHHHHHCCCS-SSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC
T ss_pred h-h---------cccccccccccCCCCc-cCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC
Confidence 0 0 00000000 0000111 1234667777776554 343 25888999999988765 789999999
Q ss_pred cEEecCEEEEccCCCchhh
Q 020277 229 QCYAGDLLVGADGIWSKVR 247 (328)
Q Consensus 229 ~~i~ad~VV~AdG~~S~vr 247 (328)
++++||.||+|+|..|.-+
T Consensus 144 ~~i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 144 DEVSARFLVVAAGPLSNAN 162 (549)
T ss_dssp CEEEEEEEEECCCSEEECC
T ss_pred CEEEeCEEEECcCCCCCCC
Confidence 9999999999999876443
No 76
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.12 E-value=4.6e-10 Score=101.40 Aligned_cols=114 Identities=20% Similarity=0.216 Sum_probs=79.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+|||||++||++|..|+++|++|+|+|+.+. .| |.+.... +...+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~----~g---------------------G~~~~~~-----~~~~~~ 56 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQ----LG---------------------GQLSALY-----PEKYIY 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS----SC---------------------HHHHHHC-----TTSEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC----CC---------------------ceehhcC-----CCceEe
Confidence 47999999999999999999999999999999864 11 1111100 000000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCC-eEEEEEecCcEEec
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVSVVLENGQCYAG 233 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i~a 233 (328)
.+. +.+ .+.+.++.+.|.+.+. ...++++++|++++.+++ .+.+.+.+|+ +.+
T Consensus 57 ------------~~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~ 112 (332)
T 3lzw_A 57 ------------DVA--------GFP---KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYS 112 (332)
T ss_dssp ------------CST--------TCS---SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEE
T ss_pred ------------ccC--------CCC---CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEe
Confidence 000 111 2345667777766543 244778999999998776 7888888876 999
Q ss_pred CEEEEccCCCc
Q 020277 234 DLLVGADGIWS 244 (328)
Q Consensus 234 d~VV~AdG~~S 244 (328)
|.||+|+|.+|
T Consensus 113 d~vVlAtG~~~ 123 (332)
T 3lzw_A 113 KTVIITAGNGA 123 (332)
T ss_dssp EEEEECCTTSC
T ss_pred CEEEECCCCCc
Confidence 99999999954
No 77
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.10 E-value=2.1e-09 Score=105.53 Aligned_cols=61 Identities=16% Similarity=0.120 Sum_probs=45.4
Q ss_pred HHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEE---EEE-ecCc--EEecCEEEEccCCCchhhhhh
Q 020277 190 MTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS---VVL-ENGQ--CYAGDLLVGADGIWSKVRKNL 250 (328)
Q Consensus 190 ~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~---v~~-~~g~--~i~ad~VV~AdG~~S~vr~~~ 250 (328)
..+.+.|.+.+ +...++++++|+++..+++.+. +.. .+|+ ++.|+.||+|+|.+|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 46677777664 3245888999999998877543 222 4665 799999999999999987644
No 78
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.09 E-value=2.1e-10 Score=103.86 Aligned_cols=120 Identities=18% Similarity=0.278 Sum_probs=78.8
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccc
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~ 153 (328)
..+.++|+|||||++||++|..|+++|++|+|+|+.+......| +.+... .
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g---g~~~~~--------------------------~ 69 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG---GQLTTT--------------------------T 69 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT---CGGGGS--------------------------S
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC---cccccc--------------------------h
Confidence 34568999999999999999999999999999999752111111 000000 0
Q ss_pred cccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEEEEE---ec
Q 020277 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVL---EN 227 (328)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~---~~ 227 (328)
.+. .+. +.+ ..+.+.++.+.|.+.+ +. .+++++ |+++..+++.+++.+ .+
T Consensus 70 ~~~------------~~~--------~~~--~~~~~~~~~~~~~~~~~~~gv-~i~~~~-v~~i~~~~~~~~v~~~~~~~ 125 (338)
T 3itj_A 70 EIE------------NFP--------GFP--DGLTGSELMDRMREQSTKFGT-EIITET-VSKVDLSSKPFKLWTEFNED 125 (338)
T ss_dssp EEC------------CST--------TCT--TCEEHHHHHHHHHHHHHHTTC-EEECSC-EEEEECSSSSEEEEETTCSS
T ss_pred hhc------------ccC--------CCc--ccCCHHHHHHHHHHHHHHcCC-EEEEeE-EEEEEEcCCEEEEEEEecCC
Confidence 000 000 111 1244566666655543 43 367677 999998888888887 36
Q ss_pred CcEEecCEEEEccCCCchh
Q 020277 228 GQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 228 g~~i~ad~VV~AdG~~S~v 246 (328)
+.++.+|.||+|+|.++..
T Consensus 126 ~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 126 AEPVTTDAIILATGASAKR 144 (338)
T ss_dssp SCCEEEEEEEECCCEEECC
T ss_pred CcEEEeCEEEECcCCCcCC
Confidence 7789999999999987643
No 79
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.09 E-value=2.1e-09 Score=97.12 Aligned_cols=138 Identities=14% Similarity=0.169 Sum_probs=82.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCccccCCCc---cccceeechhHHHHHHhcCchHHHHHHHhccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQ---YRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~~~~~~g~---~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~ 150 (328)
..++|+||||||+|+++|+.|+++ |++|+|+|+......+... ......+.+.....|+.++..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~----------- 132 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP----------- 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCC-----------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcc-----------
Confidence 356999999999999999999998 9999999998653211110 000122223333333333110
Q ss_pred ccccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeC----C--eE
Q 020277 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHG----D--KV 221 (328)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~----~--~v 221 (328)
. . ..+. +....+..++.+.|.+.+ ....++.+++|+++..++ + .+
T Consensus 133 ~-------~--~~g~-----------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV 186 (326)
T 2gjc_A 133 Y-------E--DEGD-----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTV 186 (326)
T ss_dssp C-------E--ECSS-----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CE
T ss_pred c-------c--cCCC-----------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEE
Confidence 0 0 0011 111224456666666653 244588899999998763 3 33
Q ss_pred E-EEEe--------------cCcEEec---------------CEEEEccCCCchhhhhh
Q 020277 222 S-VVLE--------------NGQCYAG---------------DLLVGADGIWSKVRKNL 250 (328)
Q Consensus 222 ~-v~~~--------------~g~~i~a---------------d~VV~AdG~~S~vr~~~ 250 (328)
. +.+. ++.++.| ++||.|+|..|++.+.+
T Consensus 187 ~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 187 AGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp EEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred EEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 3 2221 3357999 99999999999887765
No 80
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.08 E-value=1e-09 Score=98.39 Aligned_cols=112 Identities=26% Similarity=0.385 Sum_probs=78.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
++|+||||||+|+++|..|+++|+ +|+|+|+... .|. . ... ..+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~----gg~----~-~~~-------------------------~~~~ 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP----GGQ----I-TGS-------------------------SEIE 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST----TCG----G-GGC-------------------------SCBC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC----Ccc----c-ccc-------------------------cccc
Confidence 589999999999999999999999 9999999621 111 0 000 0000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEEEEEecCcEEec
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (328)
.+ . +.+ ..+++.++.+.|.+.+ +.. +++ .+|++++.+++.+++.+.+|+++++
T Consensus 48 ~~------------~--------~~~--~~~~~~~~~~~l~~~~~~~~v~-~~~-~~v~~i~~~~~~~~v~~~~g~~~~~ 103 (311)
T 2q0l_A 48 NY------------P--------GVK--EVVSGLDFMQPWQEQCFRFGLK-HEM-TAVQRVSKKDSHFVILAEDGKTFEA 103 (311)
T ss_dssp CS------------T--------TCC--SCBCHHHHHHHHHHHHHTTSCE-EEC-SCEEEEEEETTEEEEEETTSCEEEE
T ss_pred cC------------C--------CCc--ccCCHHHHHHHHHHHHHHcCCE-EEE-EEEEEEEEcCCEEEEEEcCCCEEEC
Confidence 00 0 001 1345666666665543 333 555 7899999888888888888889999
Q ss_pred CEEEEccCCCchhh
Q 020277 234 DLLVGADGIWSKVR 247 (328)
Q Consensus 234 d~VV~AdG~~S~vr 247 (328)
|.||+|+|.++...
T Consensus 104 ~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 104 KSVIIATGGSPKRT 117 (311)
T ss_dssp EEEEECCCEEECCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999999877544
No 81
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.07 E-value=7.1e-10 Score=99.67 Aligned_cols=111 Identities=19% Similarity=0.278 Sum_probs=75.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||||++|+++|..|+++|++|+|+|+. . .|. ... ....
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~----gg~----~~~--------------------------~~~~ 58 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-P----GGQ----LTE--------------------------AGIV 58 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-T----TGG----GGG--------------------------CCEE
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-C----CCe----ecc--------------------------cccc
Confidence 3579999999999999999999999999999997 1 111 000 0000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEEEEEecCcEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (328)
. .+. +.+ .+...++.+.|.+.+ +.. +++ .+|+++..+++.+.+.+.+|.++.
T Consensus 59 ~------------~~~--------~~~---~~~~~~~~~~~~~~~~~~~v~-~~~-~~v~~i~~~~~~~~v~~~~g~~~~ 113 (323)
T 3f8d_A 59 D------------DYL--------GLI---EIQASDMIKVFNKHIEKYEVP-VLL-DIVEKIENRGDEFVVKTKRKGEFK 113 (323)
T ss_dssp C------------CST--------TST---TEEHHHHHHHHHHHHHTTTCC-EEE-SCEEEEEEC--CEEEEESSSCEEE
T ss_pred c------------ccC--------CCC---CCCHHHHHHHHHHHHHHcCCE-EEE-EEEEEEEecCCEEEEEECCCCEEE
Confidence 0 000 001 133455555554443 444 555 899999988888999998988999
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||.|+|.+...
T Consensus 114 ~d~lvlAtG~~~~~ 127 (323)
T 3f8d_A 114 ADSVILGIGVKRRK 127 (323)
T ss_dssp EEEEEECCCCEECC
T ss_pred cCEEEECcCCCCcc
Confidence 99999999988543
No 82
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.06 E-value=3.3e-10 Score=110.03 Aligned_cols=137 Identities=19% Similarity=0.219 Sum_probs=81.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||||++|+.+|..|++.|++|+|+|+.+.. .|.+. ..-.|.. .+ .....+...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~---GGtw~--~~~yPg~-----~~--d~~~~~y~~-------- 67 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV---GGTWY--WNRYPGC-----RL--DTESYAYGY-------- 67 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS---CTHHH--HCCCTTC-----BC--SSCHHHHCH--------
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC---CCccc--cCCCCce-----ee--cCchhhccc--------
Confidence 4579999999999999999999999999999998541 11000 0000000 00 000000000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHh---cCC-ceEecCCeEEEEEEeCC--eEEEEEecCc
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGD-EIILNESNVIDFKDHGD--KVSVVLENGQ 229 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~---~~~-~~i~~~~~v~~i~~~~~--~v~v~~~~g~ 229 (328)
.+..... ...... .....+.++.+.|.+. .+. ..++++++|++++.+++ .|+|++.+|+
T Consensus 68 -~f~~~~~-------------~~~~~~-~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~ 132 (545)
T 3uox_A 68 -FALKGII-------------PEWEWS-ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEE 132 (545)
T ss_dssp -HHHTTSS-------------TTCCCS-BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTE
T ss_pred -ccCcccc-------------cCCCcc-ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCC
Confidence 0000000 000000 1234566666666443 343 35888999999987654 7899999999
Q ss_pred EEecCEEEEccCCCchhh
Q 020277 230 CYAGDLLVGADGIWSKVR 247 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~vr 247 (328)
+++||.||+|+|..|..+
T Consensus 133 ~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 133 VVTCRFLISATGPLSASR 150 (545)
T ss_dssp EEEEEEEEECCCSCBC--
T ss_pred EEEeCEEEECcCCCCCCc
Confidence 999999999999877544
No 83
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.06 E-value=4.1e-10 Score=106.84 Aligned_cols=56 Identities=18% Similarity=0.204 Sum_probs=47.3
Q ss_pred HHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchh
Q 020277 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~v 246 (328)
.|.+.|.+.+....++++++|++|+.++++++|++.+|++++||.||.|...+...
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 56666777665456999999999999888899999999899999999999987643
No 84
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.05 E-value=6.8e-09 Score=100.06 Aligned_cols=37 Identities=35% Similarity=0.540 Sum_probs=34.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCcc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~ 112 (328)
..+||+|||+|++||++|+.|+++|++|+|+|+.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4579999999999999999999999999999998653
No 85
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.02 E-value=7.6e-09 Score=98.75 Aligned_cols=60 Identities=25% Similarity=0.224 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhc--CCceEecCCeEEEEEEeCCeEE-EEEe-cCcEEecCEEEEccCCCchhhhh
Q 020277 189 RMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLE-NGQCYAGDLLVGADGIWSKVRKN 249 (328)
Q Consensus 189 r~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~-~g~~i~ad~VV~AdG~~S~vr~~ 249 (328)
...+.+.|.+.+ ....++.+++| ++..+++.+. +... ++.++.||.||+|+|.+|.++..
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCcc
Confidence 345666665543 22347889999 9988777653 3332 23468899999999999988753
No 86
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.01 E-value=2e-09 Score=98.93 Aligned_cols=137 Identities=20% Similarity=0.245 Sum_probs=77.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.++|+|||||++|+++|..|++.|+ +|+|+|+.. . .+. ....+..... + . .......
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~---Gg~----~~~~~~~~~~---~---------~--~~~~~~~ 61 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-V---GHS----FKHWPKSTRT---I---------T--PSFTSNG 61 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-T---THH----HHTSCTTCBC---S---------S--CCCCCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-C---CCc----cccCcccccc---c---------C--cchhccc
Confidence 4799999999999999999999999 999999985 1 110 0000000000 0 0 0000000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHh---cCCceEecCCeEEEEEEeCCeEEEEEecCcEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~---~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (328)
.++.+... ...+.. ...... ...+.+..+.+.|.+. .+.. ++++++|++++.+++++++.+.++ ++.
T Consensus 62 ~g~~~~~~----~~~~~~-~~~~~~---~~~~~~~~~~~~l~~~~~~~gv~-i~~~~~v~~i~~~~~~~~v~~~~g-~~~ 131 (369)
T 3d1c_A 62 FGMPDMNA----ISMDTS-PAFTFN---EEHISGETYAEYLQVVANHYELN-IFENTVVTNISADDAYYTIATTTE-TYH 131 (369)
T ss_dssp GTCCCTTC----SSTTCC-HHHHHC---CSSCBHHHHHHHHHHHHHHTTCE-EECSCCEEEEEECSSSEEEEESSC-CEE
T ss_pred CCchhhhh----cccccc-cccccc---ccCCCHHHHHHHHHHHHHHcCCe-EEeCCEEEEEEECCCeEEEEeCCC-EEE
Confidence 00000000 000000 000000 0134555565555433 3443 778999999998777888888776 699
Q ss_pred cCEEEEccCCCch
Q 020277 233 GDLLVGADGIWSK 245 (328)
Q Consensus 233 ad~VV~AdG~~S~ 245 (328)
+|.||+|+|.++.
T Consensus 132 ~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 132 ADYIFVATGDYNF 144 (369)
T ss_dssp EEEEEECCCSTTS
T ss_pred eCEEEECCCCCCc
Confidence 9999999999763
No 87
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.01 E-value=3.5e-09 Score=97.31 Aligned_cols=36 Identities=36% Similarity=0.660 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+.+||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 457999999999999999999999999999999753
No 88
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.00 E-value=2.4e-09 Score=96.81 Aligned_cols=113 Identities=23% Similarity=0.375 Sum_probs=74.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+|+++|..|+++|++|+|+|+... .|. .... ..+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~----gg~----~~~~--------------------------~~~ 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMP----GGQ----IAWS--------------------------EEV 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT----TGG----GGGC--------------------------SCB
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCC----Ccc----cccc--------------------------ccc
Confidence 467999999999999999999999999999999821 110 0000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHh---cCCceEecCCeEEEEEEe--CCe-EEEEEecCc
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDH--GDK-VSVVLENGQ 229 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~---~~~~~i~~~~~v~~i~~~--~~~-v~v~~~~g~ 229 (328)
..+ . +.+ ..+.+.++.+.|.+. .+.. ++. .+|++++.+ ++. +++.+.+|+
T Consensus 53 ~~~------------~--------~~~--~~~~~~~~~~~l~~~~~~~gv~-~~~-~~v~~i~~~~~~~~~~~v~~~~g~ 108 (325)
T 2q7v_A 53 ENF------------P--------GFP--EPIAGMELAQRMHQQAEKFGAK-VEM-DEVQGVQHDATSHPYPFTVRGYNG 108 (325)
T ss_dssp CCS------------T--------TCS--SCBCHHHHHHHHHHHHHHTTCE-EEE-CCEEEEEECTTSSSCCEEEEESSC
T ss_pred ccC------------C--------CCC--CCCCHHHHHHHHHHHHHHcCCE-EEe-eeEEEEEeccCCCceEEEEECCCC
Confidence 000 0 000 023345555555443 3444 444 689999876 443 777788888
Q ss_pred EEecCEEEEccCCCchh
Q 020277 230 CYAGDLLVGADGIWSKV 246 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~v 246 (328)
++++|.||+|+|.++..
T Consensus 109 ~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 109 EYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEEEEEECCCEEECC
T ss_pred EEEeCEEEECcCCCcCC
Confidence 99999999999987643
No 89
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.99 E-value=2.1e-09 Score=104.36 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...||+|||+|++||++|+.|++ |.+|+|+|+...
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 45799999999999999999999 999999999865
No 90
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.97 E-value=8.9e-10 Score=99.84 Aligned_cols=118 Identities=22% Similarity=0.315 Sum_probs=76.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+|+++|..|++.|++|+|+|+........+ +.+... ...
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~g---g~~~~~--------------------------~~~ 57 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPG---GQLTTT--------------------------TDV 57 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT---CGGGGC--------------------------SEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCC---ceeeec--------------------------ccc
Confidence 357999999999999999999999999999998321100011 000000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEEEEEecCcEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (328)
. .++ +++ ..+.+.++.+.|.+.+ +. .++.++ |++++.+++.+++++ +|.+++
T Consensus 58 ~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~gv-~~~~~~-v~~i~~~~~~~~v~~-~~~~~~ 112 (333)
T 1vdc_A 58 E------------NFP--------GFP--EGILGVELTDKFRKQSERFGT-TIFTET-VTKVDFSSKPFKLFT-DSKAIL 112 (333)
T ss_dssp C------------CST--------TCT--TCEEHHHHHHHHHHHHHHTTC-EEECCC-CCEEECSSSSEEEEC-SSEEEE
T ss_pred c------------cCC--------CCc--cCCCHHHHHHHHHHHHHHCCC-EEEEeE-EEEEEEcCCEEEEEE-CCcEEE
Confidence 0 000 011 1244566666665543 33 366665 899988777788877 788999
Q ss_pred cCEEEEccCCCchhh
Q 020277 233 GDLLVGADGIWSKVR 247 (328)
Q Consensus 233 ad~VV~AdG~~S~vr 247 (328)
+|.||+|+|.++...
T Consensus 113 ~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 113 ADAVILAIGAVAKRL 127 (333)
T ss_dssp EEEEEECCCEEECCC
T ss_pred cCEEEECCCCCcCCC
Confidence 999999999987543
No 91
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.95 E-value=5.3e-09 Score=99.36 Aligned_cols=142 Identities=17% Similarity=0.209 Sum_probs=80.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-----CeEEEEccCCccccCCCccccceeechhHHHHHHhc--------CchHHH
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKG-----FEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAI--------DLDVAE 142 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g-----~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l--------~~g~~~ 142 (328)
..++|+||||||+||++|..|+++| ++|+|+|+.+......+....+..++.. .++.+ ...+.+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~---~~~~l~~~~~p~~~~~~~~ 105 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQIS---FLKDLVSLRNPTSPYSFVN 105 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSC---TTSSSSTTTCTTCTTSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcc---hhhccccccCCCCCCChhH
Confidence 3469999999999999999999999 9999999987421000000000000000 00000 000000
Q ss_pred HHHHhcccccccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCC--ceEecCCeEEEEEEe---
Q 020277 143 EVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDH--- 217 (328)
Q Consensus 143 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~--- 217 (328)
.+... +. ...+ .... .....+.++.+.|...+.. ..++++++|++++.+
T Consensus 106 ~l~~~----------------~~-~~~~------~~~~---~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~ 159 (463)
T 3s5w_A 106 YLHKH----------------DR-LVDF------INLG---TFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSA 159 (463)
T ss_dssp HHHHT----------------TC-HHHH------HHHC---CSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEET
T ss_pred hhhhc----------------Cc-eeec------cccc---CCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCC
Confidence 00000 00 0000 0000 0234577777777554321 348889999999876
Q ss_pred CCe--EEEEEecCc----EEecCEEEEccCCCchh
Q 020277 218 GDK--VSVVLENGQ----CYAGDLLVGADGIWSKV 246 (328)
Q Consensus 218 ~~~--v~v~~~~g~----~i~ad~VV~AdG~~S~v 246 (328)
++. ++|++.+|. ++++|.||+|+|....+
T Consensus 160 ~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 160 GQVEALRVISRNADGEELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp TEEEEEEEEEEETTSCEEEEEESEEEECCCCEECC
T ss_pred CceEEEEEEEecCCCceEEEEeCEEEECCCCCCCC
Confidence 333 477777775 89999999999986543
No 92
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.94 E-value=3.6e-09 Score=94.92 Aligned_cols=115 Identities=17% Similarity=0.225 Sum_probs=72.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.+||+|||||||||+||..|+++|++|+|+|+........+ +. + .....+.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~---------------------G~---~-----~~~~~i~ 54 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG---------------------GQ---L-----TTTTIIE 54 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT---------------------CG---G-----GGSSEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC---------------------CC---c-----CChHHhh
Confidence 48999999999999999999999999999998753110000 00 0 0000000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEEEEEecCcEEec
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (328)
. +. +++ ..++..++.+.+.+.+ +.. +. ...+.....+.+...+.+.++.++.+
T Consensus 55 ~------------~~--------g~~--~~i~~~~l~~~~~~~~~~~~~~-~~-~~~v~~~~~~~~~~~~~~~~~~~~~~ 110 (314)
T 4a5l_A 55 N------------FP--------GFP--NGIDGNELMMNMRTQSEKYGTT-II-TETIDHVDFSTQPFKLFTEEGKEVLT 110 (314)
T ss_dssp C------------ST--------TCT--TCEEHHHHHHHHHHHHHHTTCE-EE-CCCEEEEECSSSSEEEEETTCCEEEE
T ss_pred h------------cc--------CCc--ccCCHHHHHHHHHHHHhhcCcE-EE-EeEEEEeecCCCceEEEECCCeEEEE
Confidence 0 00 111 1233445544444332 332 33 45677777777777777888899999
Q ss_pred CEEEEccCCCc
Q 020277 234 DLLVGADGIWS 244 (328)
Q Consensus 234 d~VV~AdG~~S 244 (328)
|.||.|+|...
T Consensus 111 ~~liiATG~~~ 121 (314)
T 4a5l_A 111 KSVIIATGATA 121 (314)
T ss_dssp EEEEECCCEEE
T ss_pred eEEEEcccccc
Confidence 99999999754
No 93
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.94 E-value=2.8e-08 Score=97.71 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...||+|||+|++||++|+.|+++|++|+|+|+...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 357999999999999999999999999999999864
No 94
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.94 E-value=5.2e-09 Score=94.28 Aligned_cols=112 Identities=20% Similarity=0.337 Sum_probs=73.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+|+++|..|+++|++|+|+|+... .|. .... ..+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~----gg~----~~~~--------------------------~~~ 60 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA----GGL----TAEA--------------------------PLV 60 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSST----TGG----GGGC--------------------------SCB
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC----Ccc----cccc--------------------------chh
Confidence 357999999999999999999999999999999531 110 0000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEecCcEEec
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (328)
..+ . ++ ..+.+.++.+.|.+.+. ...+++ .+|++++.+++.+++.+ ++.++.+
T Consensus 61 ~~~------------~--------~~---~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~ 115 (319)
T 3cty_A 61 ENY------------L--------GF---KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHA 115 (319)
T ss_dssp CCB------------T--------TB---SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEE
T ss_pred hhc------------C--------CC---cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEe
Confidence 000 0 00 01234445555544331 123555 78999988888887766 6678999
Q ss_pred CEEEEccCCCchh
Q 020277 234 DLLVGADGIWSKV 246 (328)
Q Consensus 234 d~VV~AdG~~S~v 246 (328)
|.||+|+|.++..
T Consensus 116 ~~li~AtG~~~~~ 128 (319)
T 3cty_A 116 KYVIITTGTTHKH 128 (319)
T ss_dssp EEEEECCCEEECC
T ss_pred CEEEECCCCCccc
Confidence 9999999987654
No 95
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.94 E-value=2e-08 Score=98.42 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=33.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCcc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~ 112 (328)
...||+|||+|++||++|+.|+++|.+|+|+|+....
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3579999999999999999999999999999998643
No 96
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.93 E-value=2.5e-09 Score=96.22 Aligned_cols=112 Identities=18% Similarity=0.263 Sum_probs=73.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
+.++|+||||||+|+++|..|+++|++|+|+|+... .|. +... ...
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~----gg~----~~~~--------------------------~~~ 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEK----GGQ----LTTT--------------------------TEV 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSST----TGG----GGGC--------------------------SBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCC----Cce----Eecc--------------------------hhh
Confidence 457999999999999999999999999999996521 110 0000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHh---cCCceEecCCeEEEEEEeCCeEEEEEecCcEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~---~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (328)
..+ + +++ ..+.+.++.+.+.+. .+.. ++.++ |+.++.+++.+++ +.++.++.
T Consensus 50 ~~~------------~--------~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~i~~~~~~~~v-~~~~~~~~ 104 (320)
T 1trb_A 50 ENW------------P--------GDP--NDLTGPLLMERMHEHATKFETE-IIFDH-INKVDLQNRPFRL-NGDNGEYT 104 (320)
T ss_dssp CCS------------T--------TCC--SSCBHHHHHHHHHHHHHHTTCE-EECCC-EEEEECSSSSEEE-EESSCEEE
T ss_pred hhC------------C--------CCC--CCCCHHHHHHHHHHHHHHCCCE-EEEee-eeEEEecCCEEEE-EeCCCEEE
Confidence 000 0 000 123344555554443 2433 66665 8899887777887 77888999
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||+|+|.++..
T Consensus 105 ~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 105 CDALIIATGASARY 118 (320)
T ss_dssp EEEEEECCCEEECC
T ss_pred cCEEEECCCCCcCC
Confidence 99999999987643
No 97
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.93 E-value=3.1e-09 Score=95.25 Aligned_cols=111 Identities=18% Similarity=0.283 Sum_probs=74.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccccc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~~ 157 (328)
++|+||||||+|+++|..|+++|++|+|+|+.. .|. . .. .. + +..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-----gG~----~-~~--------~~--~---------------~~~ 46 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-----GGQ----I-LD--------TV--D---------------IEN 46 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-----TGG----G-GG--------CC--E---------------ECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-----Cce----e-cc--------cc--c---------------ccc
Confidence 689999999999999999999999999998642 111 0 00 00 0 000
Q ss_pred cccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeC---CeEEEEEecCcEEe
Q 020277 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHG---DKVSVVLENGQCYA 232 (328)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~---~~v~v~~~~g~~i~ 232 (328)
+. +. ....+.++.+.|.+.+. ...++.+++|+.+..+. +.+++.+.+|++++
T Consensus 47 ~~--------------------~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~ 103 (310)
T 1fl2_A 47 YI--------------------SV---PKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLK 103 (310)
T ss_dssp BT--------------------TB---SSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEE
T ss_pred cc--------------------Cc---CCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEE
Confidence 00 00 01234455555544431 23477788999997653 36888888888999
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||+|+|.++..
T Consensus 104 ~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 104 ARSIIVATGAKWRN 117 (310)
T ss_dssp EEEEEECCCEEECC
T ss_pred eCEEEECcCCCcCC
Confidence 99999999987643
No 98
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.93 E-value=5.1e-09 Score=100.37 Aligned_cols=60 Identities=22% Similarity=0.317 Sum_probs=42.0
Q ss_pred HHHHHHHHHhc---CCceEecCCeEEEEEEeCCeEE-EEEecCcEEecCEEEEccCCCchhhhhh
Q 020277 190 MTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLVGADGIWSKVRKNL 250 (328)
Q Consensus 190 ~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~ad~VV~AdG~~S~vr~~~ 250 (328)
..|.+.|.+.+ |. .|+++++|++|+.++++++ |+++||++++||.||.+.+.+...+..+
T Consensus 221 ~~l~~aL~~~~~~~Gg-~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGG-EVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHHHHHHTTC-EEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------
T ss_pred cchHHHHHHHHHHhCC-ceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhc
Confidence 34556665543 44 4899999999999999887 8889999999999999988887777655
No 99
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.92 E-value=3e-09 Score=96.67 Aligned_cols=113 Identities=21% Similarity=0.257 Sum_probs=73.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
...++|+||||||+|+++|..|++.|++|+|+|+... .|. +.... .
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~----gg~----~~~~~--------------------------~ 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSF----GGA----LMTTT--------------------------D 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSC----SCG----GGSCS--------------------------C
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC----CCc----eeccc--------------------------h
Confidence 4568999999999999999999999999999997521 110 00000 0
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHh---cCCceEecCCeEEEEEEeCCeEEE-EEecCcE
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDHGDKVSV-VLENGQC 230 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~---~~~~~i~~~~~v~~i~~~~~~v~v-~~~~g~~ 230 (328)
... ++ +++ ..+.+.++.+.|.+. .+. .+++++ |++++. ++.+++ .+.+|.+
T Consensus 58 ~~~------------~~--------~~~--~~~~~~~~~~~l~~~~~~~~v-~~~~~~-v~~i~~-~~~~~v~~~~~g~~ 112 (335)
T 2a87_A 58 VEN------------YP--------GFR--NGITGPELMDEMREQALRFGA-DLRMED-VESVSL-HGPLKSVVTADGQT 112 (335)
T ss_dssp BCC------------ST--------TCT--TCBCHHHHHHHHHHHHHHTTC-EEECCC-EEEEEC-SSSSEEEEETTSCE
T ss_pred hhh------------cC--------CCC--CCCCHHHHHHHHHHHHHHcCC-EEEEee-EEEEEe-CCcEEEEEeCCCCE
Confidence 000 00 000 123344555555443 343 366665 888877 555677 7778889
Q ss_pred EecCEEEEccCCCchh
Q 020277 231 YAGDLLVGADGIWSKV 246 (328)
Q Consensus 231 i~ad~VV~AdG~~S~v 246 (328)
+.+|.||+|+|.++..
T Consensus 113 ~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 113 HRARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEEEECCCEEECC
T ss_pred EEeCEEEECCCCCccC
Confidence 9999999999987643
No 100
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.91 E-value=2.8e-09 Score=101.54 Aligned_cols=55 Identities=15% Similarity=0.093 Sum_probs=42.8
Q ss_pred HHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEE---ecCcEEecCEEEEccCCCch
Q 020277 190 MTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL---ENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 190 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~---~~g~~i~ad~VV~AdG~~S~ 245 (328)
..|.+.|.+.++. .++++++|++|+.+++++.|++ .+|++++||.||.|.+.+..
T Consensus 238 ~~l~~~l~~~lg~-~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 238 QVLIDALAASLGD-AAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp HHHHHHHHHHHGG-GEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHhhh-hEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 3456666666654 4889999999998888888888 67888999999999998764
No 101
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.91 E-value=3.8e-09 Score=99.06 Aligned_cols=55 Identities=18% Similarity=0.272 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchh
Q 020277 190 MTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 190 ~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~v 246 (328)
..+.+.|.+.+. ...++++++|++|+.+++++ | ..+|++++||.||.|.|.+...
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 345556655542 24589999999999888888 5 6788899999999999998755
No 102
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.89 E-value=5.7e-10 Score=102.11 Aligned_cols=35 Identities=26% Similarity=0.556 Sum_probs=32.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCC------CeEEEEccCCcc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKG------FEVLVFEKDMSA 112 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g------~~v~~~~~~~~~ 112 (328)
+||+|||||++|+++|+.|+++| ++|+|+|+....
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 48999999999999999999998 999999998643
No 103
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.88 E-value=4.9e-09 Score=98.22 Aligned_cols=58 Identities=12% Similarity=0.128 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcC--CceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchhh
Q 020277 190 MTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKVR 247 (328)
Q Consensus 190 ~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~vr 247 (328)
..|.+.|.+.+. ...++++++|++|+.++++++....+|++++||.||.|.|.+...+
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIADDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEECCEEEECCEEEECCCHHHHHH
Confidence 345566665542 2458899999999999888873344688999999999999987653
No 104
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.88 E-value=3.4e-09 Score=99.61 Aligned_cols=50 Identities=18% Similarity=0.318 Sum_probs=40.8
Q ss_pred HHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCC
Q 020277 192 LQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIW 243 (328)
Q Consensus 192 l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~ 243 (328)
+.+.+.+..+ .++++++|++|+.++++++|++.+|++++||.||.|.|..
T Consensus 209 l~~~~~~~~g--~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 209 LVDAMSQEIP--EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHTTCS--CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHhhCC--ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 3333444445 5899999999999888899999999889999999999964
No 105
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.86 E-value=1.9e-08 Score=98.65 Aligned_cols=135 Identities=14% Similarity=0.139 Sum_probs=73.1
Q ss_pred cchhHhHHhHHhcCCCCCCCCCCCCCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCccccCCCccccceeechhHH
Q 020277 53 SKNPTQMKAAVAESPTNNSDSENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNAL 130 (328)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~ 130 (328)
.+..+||..+.+..... ..+.+..++|+|||||++||++|..|+++ |++|+|+|+.+.. + +.+.
T Consensus 13 ~~~~~np~~g~e~~~~~-~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~----~-------~~~~-- 78 (588)
T 3ics_A 13 ASMTGGQQMGRTLYDDD-DKDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI----S-------FANC-- 78 (588)
T ss_dssp ----------------------CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS----S-------BCGG--
T ss_pred cccccchhcCccccCcc-cCCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc----c-------ccCC--
Confidence 44568999986544321 13445678999999999999999999998 8999999998642 1 1111
Q ss_pred HHHHhcCchHHHHHHHhcccccccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCe
Q 020277 131 AALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESN 210 (328)
Q Consensus 131 ~~l~~l~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~ 210 (328)
++...+... ... . ... ... . .+.+.+..+.. ++++++
T Consensus 79 --------~lp~~~~g~-~~~-----------~------------~~~-------~~~--~-~~~~~~~~gi~-v~~~~~ 115 (588)
T 3ics_A 79 --------GLPYYIGGV-ITE-----------R------------QKL-------LVQ--T-VERMSKRFNLD-IRVLSE 115 (588)
T ss_dssp --------GHHHHHTTS-SCC-----------G------------GGG-------BSS--C-HHHHHHHTTCE-EECSEE
T ss_pred --------CCchhhcCc-CCC-----------h------------HHh-------hcc--C-HHHHHHhcCcE-EEECCE
Confidence 111111000 000 0 000 000 0 12223334444 778999
Q ss_pred EEEEEEeCCeEEEEE-ecCc--EEecCEEEEccCCCc
Q 020277 211 VIDFKDHGDKVSVVL-ENGQ--CYAGDLLVGADGIWS 244 (328)
Q Consensus 211 v~~i~~~~~~v~v~~-~~g~--~i~ad~VV~AdG~~S 244 (328)
|+++..++..+.+.. .+|+ ++.+|.||.|+|...
T Consensus 116 V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 116 VVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 999998888777765 3555 789999999999754
No 106
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.84 E-value=3.8e-08 Score=97.43 Aligned_cols=35 Identities=34% Similarity=0.492 Sum_probs=32.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..||+|||+|++||++|+.|+++|.+|+|+|+...
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 57999999999999999999999999999999864
No 107
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.84 E-value=1.6e-08 Score=97.67 Aligned_cols=112 Identities=19% Similarity=0.327 Sum_probs=75.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+||||||+|+++|..|+++|++|+|+|+.. .|. . .. .. + +
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-----GG~----~-~~--------~~--~---------------~ 255 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-----GGQ----V-LD--------TV--D---------------I 255 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-----TGG----G-TT--------CS--C---------------B
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-----CCc----c-cc--------cc--c---------------c
Confidence 46799999999999999999999999999998642 111 0 00 00 0 0
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEe---CCeEEEEEecCcE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH---GDKVSVVLENGQC 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~---~~~v~v~~~~g~~ 230 (328)
..+. +.+ ...+.++.+.|.+.+. ...++.+++|+++..+ ++.+++++.+|.+
T Consensus 256 ~~~~--------------------~~~---~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~ 312 (521)
T 1hyu_A 256 ENYI--------------------SVP---KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAV 312 (521)
T ss_dssp CCBT--------------------TBS---SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCE
T ss_pred cccC--------------------CCC---CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCE
Confidence 0000 000 1234455555544431 2347778899999754 2368888888989
Q ss_pred EecCEEEEccCCCch
Q 020277 231 YAGDLLVGADGIWSK 245 (328)
Q Consensus 231 i~ad~VV~AdG~~S~ 245 (328)
+++|.||+|+|.++.
T Consensus 313 ~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 313 LKARSIIIATGAKWR 327 (521)
T ss_dssp EEEEEEEECCCEEEC
T ss_pred EEcCEEEECCCCCcC
Confidence 999999999998764
No 108
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.81 E-value=2.4e-08 Score=95.12 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=45.4
Q ss_pred HHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchh
Q 020277 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~v 246 (328)
.|.+.|.+.++...++++++|++|+.++++|+|++.+| +++||.||.|.+.+...
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~ 291 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVV 291 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHH
Confidence 45666666665456999999999999999999988888 89999999999987543
No 109
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.81 E-value=2.8e-08 Score=94.99 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=70.3
Q ss_pred cchhHhHHhHHhcCCCCCCCCCCCCCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCccccCCCccccceeechhHH
Q 020277 53 SKNPTQMKAAVAESPTNNSDSENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNAL 130 (328)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~ 130 (328)
.+..+||..+.+.....+ ......++|+|||||++|+++|..|++. |++|+|+|+.+... . .+.
T Consensus 13 ~~~~~np~~g~~~~~~~~-~~~~~~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~---~--------~~~-- 78 (480)
T 3cgb_A 13 ASMTGGQQMGRTLYDDDD-KDRWGSMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS---Y--------AQC-- 78 (480)
T ss_dssp -------------------------CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS---B--------CGG--
T ss_pred ccccchhhhcccccCCCC-cCccccceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC---C--------CCC--
Confidence 345688888865432211 1111246999999999999999999996 89999999986421 0 010
Q ss_pred HHHHhcCchHHHHHHHhcccccccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCe
Q 020277 131 AALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESN 210 (328)
Q Consensus 131 ~~l~~l~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~ 210 (328)
++...+ . +.. ... + . .+.+ ..+.+.+..+. .++.+++
T Consensus 79 --------~~~~~~-~-~~~--~~~---------------~------~-------l~~~--~~~~~~~~~gv-~~~~~~~ 115 (480)
T 3cgb_A 79 --------GLPYVI-S-GAI--AST---------------E------K-------LIAR--NVKTFRDKYGI-DAKVRHE 115 (480)
T ss_dssp --------GHHHHH-T-TSS--SCG---------------G------G-------GBSS--CHHHHHHTTCC-EEESSEE
T ss_pred --------Ccchhh-c-CCc--CCH---------------H------H-------hhhc--CHHHHHhhcCC-EEEeCCE
Confidence 111000 0 000 000 0 0 0000 01223333344 3777899
Q ss_pred EEEEEEeCCeEEEEE-ecCc--EEecCEEEEccCCCch
Q 020277 211 VIDFKDHGDKVSVVL-ENGQ--CYAGDLLVGADGIWSK 245 (328)
Q Consensus 211 v~~i~~~~~~v~v~~-~~g~--~i~ad~VV~AdG~~S~ 245 (328)
|+.++.++..+.+.. .+|+ ++++|.||+|+|....
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 999987777777765 4566 7999999999997654
No 110
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.80 E-value=5.3e-08 Score=93.91 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=44.5
Q ss_pred HHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCch
Q 020277 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
.|.+.|.+.++. .++++++|++|+.++++++|++.+|++++||.||.|.+.+..
T Consensus 216 ~l~~~l~~~lg~-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLLGD-RVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHHGG-GEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHcCC-cEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 455555555654 488999999999888889999999999999999999998763
No 111
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.78 E-value=2.6e-08 Score=89.44 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..+||+||||||||++||..|++.|++|+|+|+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46899999999999999999999999999999864
No 112
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.74 E-value=7.6e-08 Score=96.89 Aligned_cols=40 Identities=23% Similarity=0.199 Sum_probs=36.5
Q ss_pred eEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCC
Q 020277 204 IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIW 243 (328)
Q Consensus 204 ~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~ 243 (328)
.|+++++|++|+.++++|+|++.+|++++||.||.|....
T Consensus 545 ~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 545 DIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred cEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 4899999999999888999999999999999999999754
No 113
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.74 E-value=7.6e-09 Score=89.41 Aligned_cols=35 Identities=34% Similarity=0.522 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|+||||||+||++|+.|+++|++|+|||+.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 46899999999999999999999999999999864
No 114
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.73 E-value=2.5e-07 Score=91.54 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHH---H-CCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAK---R-KGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~---~-~g~~v~~~~~~~~ 111 (328)
...||+|||||++||++|+.|+ + +|.+|+|+|+...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3479999999999999999999 6 8999999999864
No 115
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.70 E-value=9e-08 Score=88.86 Aligned_cols=109 Identities=18% Similarity=0.212 Sum_probs=70.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
++.+|+|||||+||+++|..|...+++|+|+|+.+... . ..+ .+...+.. ......+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~----y------~~~-----------~l~~~l~g--~~~~~~l 64 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP----Y------YRP-----------RLNEIIAK--NKSIDDI 64 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC----B------CGG-----------GHHHHHHS--CCCGGGT
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC----c------ccC-----------hhhHHHcC--CCCHHHc
Confidence 45689999999999999999988899999999986421 0 011 11111110 0000000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
.... .+.+ +..+. .++++++|++++.++. ++++.+|+++.+|.
T Consensus 65 ------------------------------~~~~---~~~~-~~~~i-~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~ 107 (385)
T 3klj_A 65 ------------------------------LIKK---NDWY-EKNNI-KVITSEFATSIDPNNK--LVTLKSGEKIKYEK 107 (385)
T ss_dssp ------------------------------BSSC---HHHH-HHTTC-EEECSCCEEEEETTTT--EEEETTSCEEECSE
T ss_pred ------------------------------cCCC---HHHH-HHCCC-EEEeCCEEEEEECCCC--EEEECCCCEEECCE
Confidence 0000 1111 22343 3778999999987665 56678899999999
Q ss_pred EEEccCCCc
Q 020277 236 LVGADGIWS 244 (328)
Q Consensus 236 VV~AdG~~S 244 (328)
||.|+|...
T Consensus 108 lvlAtG~~p 116 (385)
T 3klj_A 108 LIIASGSIA 116 (385)
T ss_dssp EEECCCEEE
T ss_pred EEEecCCCc
Confidence 999999743
No 116
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.70 E-value=6.9e-08 Score=91.78 Aligned_cols=33 Identities=30% Similarity=0.537 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
.++|+||||||+|+++|..|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 479999999999999999999999999999997
No 117
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.69 E-value=1.1e-07 Score=84.95 Aligned_cols=111 Identities=23% Similarity=0.324 Sum_probs=70.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEE-EccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~-~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
..++|+|||||++||++|..|+++|++|+| +|+... .|. .... ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~----gG~----~~~~--------------------------~~ 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP----GGQ----ITSS--------------------------SE 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST----TGG----GGGC--------------------------SC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC----Cce----eeee--------------------------ce
Confidence 457999999999999999999999999999 999421 111 0000 00
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC--CceEecCCeEEEEEEeC--CeEEEEEecCcE
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHG--DKVSVVLENGQC 230 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v~v~~~~g~~ 230 (328)
+..+ + +.+ ..+...++...+.+.+. ...++++ +|+++ .++ +.+.+.+..+.+
T Consensus 49 ~~~~------------~--------~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~ 104 (315)
T 3r9u_A 49 IENY------------P--------GVA--QVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKT 104 (315)
T ss_dssp BCCS------------T--------TCC--SCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCE
T ss_pred eccC------------C--------CCC--CCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCE
Confidence 0000 0 000 12345556666555432 1236656 89999 776 678753333228
Q ss_pred EecCEEEEccCCCc
Q 020277 231 YAGDLLVGADGIWS 244 (328)
Q Consensus 231 i~ad~VV~AdG~~S 244 (328)
+.+|.||.|+|...
T Consensus 105 ~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 105 ELAKAVIVCTGSAP 118 (315)
T ss_dssp EEEEEEEECCCEEE
T ss_pred EEeCEEEEeeCCCC
Confidence 99999999999754
No 118
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.69 E-value=9.8e-08 Score=91.07 Aligned_cols=35 Identities=31% Similarity=0.507 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 57999999999999999999999999999999643
No 119
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.67 E-value=2.8e-07 Score=86.28 Aligned_cols=53 Identities=11% Similarity=0.066 Sum_probs=41.2
Q ss_pred HHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCch
Q 020277 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
.+.+.|.+.++. .++++++|++|+.++++++|++.+|+ ++||.||.|.+.+..
T Consensus 207 ~l~~~l~~~l~~-~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 207 AMFEHLNATLEH-PAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHSSS-CCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHhhcc-eEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 344445555554 37889999999988888988887775 999999999998744
No 120
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.67 E-value=7.6e-08 Score=92.77 Aligned_cols=56 Identities=16% Similarity=0.162 Sum_probs=44.0
Q ss_pred HHHHHHHHHhcCCceEecCCeEEEEEEe-CCeEEEEEecCcEEecCEEEEccCCCch
Q 020277 190 MTLQQILAKAVGDEIILNESNVIDFKDH-GDKVSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 190 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~-~~~v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
..|.+.|.+.++...|+++++|++|..+ +++++|++.+|++++||.||.|.+....
T Consensus 202 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 202 DSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 4445555555554459999999999986 6679999999989999999999987543
No 121
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.66 E-value=7.6e-08 Score=90.81 Aligned_cols=109 Identities=17% Similarity=0.219 Sum_probs=69.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH---CCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~---~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~ 153 (328)
.++|+|||||++|+++|..|++ .|++|+|+|+.+.. ...|........ .....
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~-----------~~~~~~~~~~~g-------------~~~~~ 59 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF-----------QFVPSNPWVGVG-------------WKERD 59 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE-----------ECGGGHHHHHHT-------------SSCHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC-----------cccCCccccccC-------------ccCHH
Confidence 3699999999999999999999 89999999998641 122211111000 00000
Q ss_pred cccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEec
Q 020277 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (328)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 233 (328)
.+ ... +.+.+ +..+.. ++ ..+|+.++.++. ++++.+|+++.+
T Consensus 60 ~~----------------------------~~~-----l~~~~-~~~gv~-~~-~~~v~~id~~~~--~V~~~~g~~i~~ 101 (437)
T 3sx6_A 60 DI----------------------------AFP-----IRHYV-ERKGIH-FI-AQSAEQIDAEAQ--NITLADGNTVHY 101 (437)
T ss_dssp HH----------------------------EEE-----CHHHH-HTTTCE-EE-CSCEEEEETTTT--EEEETTSCEEEC
T ss_pred HH----------------------------HHH-----HHHHH-HHCCCE-EE-EeEEEEEEcCCC--EEEECCCCEEEC
Confidence 00 000 11222 223444 33 478999976655 566788888999
Q ss_pred CEEEEccCCCchhh
Q 020277 234 DLLVGADGIWSKVR 247 (328)
Q Consensus 234 d~VV~AdG~~S~vr 247 (328)
|.||.|+|..+...
T Consensus 102 d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 102 DYLMIATGPKLAFE 115 (437)
T ss_dssp SEEEECCCCEECGG
T ss_pred CEEEECCCCCcCcc
Confidence 99999999876543
No 122
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.66 E-value=4.6e-08 Score=92.89 Aligned_cols=77 Identities=21% Similarity=0.182 Sum_probs=52.7
Q ss_pred ccCc---cccccccccCC-CCccchhHhHHhH-----HhcCCCCCCCCCCCCCeEEEECCChHHHHHHHHHHHCCCeEEE
Q 020277 35 SRYD---HCINYKFRTGT-SGQSKNPTQMKAA-----VAESPTNNSDSENKKLRILVAGGGIGGLVFALAAKRKGFEVLV 105 (328)
Q Consensus 35 ~~c~---~c~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~ 105 (328)
|.|. .|+..|.+... ..++......+.. ...+.....+...+.++|+||||||+||++|..|+++|++|+|
T Consensus 71 rvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v 150 (456)
T 2vdc_G 71 RICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHV 150 (456)
T ss_dssp HHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred ccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 5675 48775555544 5666544333322 2333322222335678999999999999999999999999999
Q ss_pred EccCCc
Q 020277 106 FEKDMS 111 (328)
Q Consensus 106 ~~~~~~ 111 (328)
||+.+.
T Consensus 151 ~e~~~~ 156 (456)
T 2vdc_G 151 YDRYDR 156 (456)
T ss_dssp ECSSSS
T ss_pred EeccCC
Confidence 999854
No 123
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.65 E-value=9.7e-08 Score=91.27 Aligned_cols=35 Identities=34% Similarity=0.606 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 57999999999999999999999999999999643
No 124
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.64 E-value=8.9e-08 Score=91.05 Aligned_cols=53 Identities=17% Similarity=0.120 Sum_probs=39.5
Q ss_pred HHHHHHHhcC--CceEecCCeEEEEEEeCCe-EEEEEecCcEEecCEEEEccCCCch
Q 020277 192 LQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 192 l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
|.+.|.+.+. ...++++++|++|+.++++ +.|++ ++++++||.||.|.+.+..
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 4555555442 2358999999999987766 77765 5668999999999987654
No 125
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.64 E-value=7.9e-08 Score=91.98 Aligned_cols=55 Identities=9% Similarity=0.033 Sum_probs=43.3
Q ss_pred HHHHHHHHhcCC---ceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCch
Q 020277 191 TLQQILAKAVGD---EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 191 ~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
.+.+.|.+.+.. ..++++++|++|+.++++++|++.+|++++||.||.|.|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 344445554422 3488999999999888889999988888999999999998654
No 126
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.64 E-value=8.1e-08 Score=90.46 Aligned_cols=35 Identities=20% Similarity=0.426 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--CeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g--~~v~~~~~~~~ 111 (328)
.|+|+|||||++|+++|..|++.+ ++|||+|+.+.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 368999999999999999999875 79999999864
No 127
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.64 E-value=1.7e-07 Score=89.22 Aligned_cols=36 Identities=33% Similarity=0.574 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA 40 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999853
No 128
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.63 E-value=3.7e-07 Score=84.52 Aligned_cols=101 Identities=23% Similarity=0.322 Sum_probs=74.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
+++|+|||+|+.|+.+|..|++.|.+|+++|+.+...... ++..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~-------------------~~~~~---------------- 189 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL-------------------LHPAA---------------- 189 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc-------------------cCHHH----------------
Confidence 6899999999999999999999999999999875421100 00000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEE
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~V 236 (328)
...+.+.|.+ .+. .++++++|++++.+++++.+++.+|+++++|.|
T Consensus 190 --------------------------------~~~l~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~v 235 (384)
T 2v3a_A 190 --------------------------------AKAVQAGLEG-LGV-RFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLV 235 (384)
T ss_dssp --------------------------------HHHHHHHHHT-TTC-EEEESCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-cCC-EEEeCCEEEEEEecCCEEEEEECCCCEEECCEE
Confidence 0112222222 233 377899999999888888898999999999999
Q ss_pred EEccCCCchh
Q 020277 237 VGADGIWSKV 246 (328)
Q Consensus 237 V~AdG~~S~v 246 (328)
|.|+|.++..
T Consensus 236 v~a~G~~p~~ 245 (384)
T 2v3a_A 236 VSAVGLRPRT 245 (384)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCH
Confidence 9999988754
No 129
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.62 E-value=3.3e-07 Score=86.82 Aligned_cols=101 Identities=27% Similarity=0.350 Sum_probs=75.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|++|+.+|..|++.|.+|+++|+.+..... .+..+.
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~--------------------~~~~~~-------------- 211 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT--------------------MDLEVS-------------- 211 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHHH--------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc--------------------cCHHHH--------------
Confidence 3579999999999999999999999999999998542110 000000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
..+.+.|.+ .+. .++++++|++++.+++++.+++.+|+++++|.
T Consensus 212 ----------------------------------~~l~~~l~~-~Gv-~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~ 255 (455)
T 2yqu_A 212 ----------------------------------RAAERVFKK-QGL-TIRTGVRVTAVVPEAKGARVELEGGEVLEADR 255 (455)
T ss_dssp ----------------------------------HHHHHHHHH-HTC-EEECSCCEEEEEEETTEEEEEETTSCEEEESE
T ss_pred ----------------------------------HHHHHHHHH-CCC-EEEECCEEEEEEEeCCEEEEEECCCeEEEcCE
Confidence 112222322 243 37889999999988888888888888999999
Q ss_pred EEEccCCCchh
Q 020277 236 LVGADGIWSKV 246 (328)
Q Consensus 236 VV~AdG~~S~v 246 (328)
||.|+|.++..
T Consensus 256 vv~A~G~~p~~ 266 (455)
T 2yqu_A 256 VLVAVGRRPYT 266 (455)
T ss_dssp EEECSCEEECC
T ss_pred EEECcCCCcCC
Confidence 99999998765
No 130
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.62 E-value=8.9e-08 Score=91.22 Aligned_cols=35 Identities=20% Similarity=0.106 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
.++|+|||||++||++|..|+++ |++|+|||+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 47999999999999999999998 999999999865
No 131
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.62 E-value=1.1e-07 Score=89.66 Aligned_cols=111 Identities=15% Similarity=0.254 Sum_probs=69.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
.++|+|||||++|+++|..|+++|+ +|+|+|+.+... ... + .+...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~---------~~~-~-----------~l~~~----------- 51 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP---------HHL-P-----------PLSKA----------- 51 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC---------BCS-G-----------GGGTT-----------
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC---------CcC-C-----------CCcHH-----------
Confidence 5799999999999999999999998 799999875311 000 0 00000
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecC
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad 234 (328)
+..+... . ... .+. +.+.+ +..+. .++.+++|+.++.++. ++.+.+|+++.+|
T Consensus 52 ---~~~~~~~-----~------~~~------~~~---~~~~~-~~~gv-~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d 104 (431)
T 1q1r_A 52 ---YLAGKAT-----A------ESL------YLR---TPDAY-AAQNI-QLLGGTQVTAINRDRQ--QVILSDGRALDYD 104 (431)
T ss_dssp ---TTTTCSC-----S------GGG------BSS---CHHHH-HHTTE-EEECSCCEEEEETTTT--EEEETTSCEEECS
T ss_pred ---HhCCCCC-----h------HHh------ccc---CHHHH-HhCCC-EEEeCCEEEEEECCCC--EEEECCCCEEECC
Confidence 0000000 0 000 000 01222 22333 4777899999986554 4566788899999
Q ss_pred EEEEccCCCchh
Q 020277 235 LLVGADGIWSKV 246 (328)
Q Consensus 235 ~VV~AdG~~S~v 246 (328)
.||+|+|.++..
T Consensus 105 ~lviAtG~~p~~ 116 (431)
T 1q1r_A 105 RLVLATGGRPRP 116 (431)
T ss_dssp EEEECCCEEECC
T ss_pred EEEEcCCCCccC
Confidence 999999987644
No 132
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.62 E-value=2.3e-07 Score=90.36 Aligned_cols=111 Identities=19% Similarity=0.234 Sum_probs=69.8
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
++|+|||||++||++|..|+++ |++|+|+|+.+.. + +.+. ++...+... ...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~----~-------~~~~----------~l~~~~~~~-~~~---- 55 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV----S-------FANC----------GLPYHISGE-IAQ---- 55 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS----S-------BCGG----------GHHHHHTSS-SCC----
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc----c-------cccc----------CchHHhcCC-cCC----
Confidence 5899999999999999999998 8999999998642 1 1111 111111000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEE-ecCc--EEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL-ENGQ--CYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~i~ 232 (328)
... ..... .+.+.+..+.. ++++++|++++.++..+++.. .+|+ ++.
T Consensus 56 -------~~~-------------------~~~~~---~~~~~~~~~i~-~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~ 105 (565)
T 3ntd_A 56 -------RSA-------------------LVLQT---PESFKARFNVE-VRVKHEVVAIDRAAKLVTVRRLLDGSEYQES 105 (565)
T ss_dssp -------GGG-------------------GBCCC---HHHHHHHHCCE-EETTEEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -------hHH-------------------hhccC---HHHHHHhcCcE-EEECCEEEEEECCCCEEEEEecCCCCeEEEE
Confidence 000 00000 12223334444 778999999988888777664 2343 799
Q ss_pred cCEEEEccCCCc
Q 020277 233 GDLLVGADGIWS 244 (328)
Q Consensus 233 ad~VV~AdG~~S 244 (328)
+|.||.|+|...
T Consensus 106 ~d~lviAtG~~p 117 (565)
T 3ntd_A 106 YDTLLLSPGAAP 117 (565)
T ss_dssp CSEEEECCCEEE
T ss_pred CCEEEECCCCCC
Confidence 999999999754
No 133
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.61 E-value=3.4e-07 Score=90.68 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHC------CCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~------g~~v~~~~~~~~ 111 (328)
..||+|||+|+|||++|+.|++. |.+|+|+|+...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 57999999999999999999998 999999999854
No 134
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.60 E-value=1.3e-07 Score=89.59 Aligned_cols=34 Identities=26% Similarity=0.578 Sum_probs=32.0
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
++|+|||||++|+++|..|+++ |++|+|+|+.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 6999999999999999999998 999999999864
No 135
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.57 E-value=1.9e-07 Score=89.43 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC---CeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKG---FEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g---~~v~~~~~~~~ 111 (328)
+.++|+|||||++|+++|..|++.| ++|+|+|+.+.
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 3589999999999999999999988 99999999853
No 136
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.56 E-value=2.3e-07 Score=87.81 Aligned_cols=35 Identities=31% Similarity=0.496 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
.++|+|||||++|+++|..|++. |++|+|+|+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCc
Confidence 57999999999999999999998 889999999864
No 137
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.55 E-value=3.5e-07 Score=85.51 Aligned_cols=34 Identities=26% Similarity=0.582 Sum_probs=31.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCe--EEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~--v~~~~~~~~ 111 (328)
++|+|||||++|+++|..|+++|++ |+|+|+.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC
Confidence 5899999999999999999999987 999999864
No 138
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.54 E-value=7.8e-07 Score=84.55 Aligned_cols=100 Identities=26% Similarity=0.317 Sum_probs=73.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
+++|+|||||++|+.+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 212 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ--------------------GDPET---------------- 212 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------SCHHH----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc--------------------cCHHH----------------
Confidence 579999999999999999999999999999998542110 00000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEe-c--Cc--EE
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-N--GQ--CY 231 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~--g~--~i 231 (328)
...+.+.|.+ .+. .++++++|++++.+++++.+++. + |+ ++
T Consensus 213 --------------------------------~~~l~~~l~~-~gV-~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 258 (464)
T 2eq6_A 213 --------------------------------AALLRRALEK-EGI-RVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEV 258 (464)
T ss_dssp --------------------------------HHHHHHHHHH-TTC-EEECSEEEEEEEEETTEEEEEEEETTCCSCEEE
T ss_pred --------------------------------HHHHHHHHHh-cCC-EEEcCCEEEEEEEeCCEEEEEEeecCCCceeEE
Confidence 0112223322 243 47889999999988888888876 6 76 89
Q ss_pred ecCEEEEccCCCchh
Q 020277 232 AGDLLVGADGIWSKV 246 (328)
Q Consensus 232 ~ad~VV~AdG~~S~v 246 (328)
.+|.||.|+|..+..
T Consensus 259 ~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 259 VVDKVLVAVGRKPRT 273 (464)
T ss_dssp EESEEEECSCEEESC
T ss_pred EcCEEEECCCcccCC
Confidence 999999999988754
No 139
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.54 E-value=1.3e-07 Score=88.00 Aligned_cols=35 Identities=31% Similarity=0.467 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--CeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g--~~v~~~~~~~~ 111 (328)
+|+|+|||||++|+++|..|++.+ .+|+|+|+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 689999999999999999999876 58999998764
No 140
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.54 E-value=5.7e-07 Score=84.56 Aligned_cols=35 Identities=20% Similarity=0.474 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHH--CCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~--~g~~v~~~~~~~~ 111 (328)
.++|+|||||++|+++|..|++ .|++|+|+|+.+.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 3689999999999999999999 8899999999864
No 141
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.53 E-value=5.3e-07 Score=86.95 Aligned_cols=36 Identities=31% Similarity=0.497 Sum_probs=33.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
...+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 356899999999999999999999999999999964
No 142
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.52 E-value=4.1e-08 Score=97.35 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=55.7
Q ss_pred CCcccccCccccc-cccccCCCCccchhHh-HHhHHhcCCCCCCCCCCCCCeEEEECCChHHHHHHHHHHHCC-------
Q 020277 30 SCIDFSRYDHCIN-YKFRTGTSGQSKNPTQ-MKAAVAESPTNNSDSENKKLRILVAGGGIGGLVFALAAKRKG------- 100 (328)
Q Consensus 30 ~~~~i~~c~~c~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~i~G~g~~g~~~a~~l~~~g------- 100 (328)
..++|++||+ | |.......++..|.+| +........ ..+.+.++|+|||||++||++|+.|+++|
T Consensus 13 ~~~~i~~ci~--~ac~~~~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~ 86 (721)
T 3ayj_A 13 DEKKIATTVG--EARLSGINYRHPDSALVSYPVAAAAPLG----RLPAGNYRIAIVGGGAGGIAALYELGRLAATLPAGS 86 (721)
T ss_dssp ---CCCCBHH--HHHHHSTTCCCGGGTTCCHHHHTTSCCB----CCCSSEEEEEEECCSHHHHHHHHHHHHHHTTSCTTC
T ss_pred chhhhhhhHH--HHhccchhcccchhhhcccccccccccC----CCCCCCCeEEEECCCHHHHHHHHHHHHcCcccccCC
Confidence 3488999999 6 6666677788888776 333322211 12234579999999999999999999999
Q ss_pred -CeEEEEccCC
Q 020277 101 -FEVLVFEKDM 110 (328)
Q Consensus 101 -~~v~~~~~~~ 110 (328)
++|+|||++.
T Consensus 87 ~~~V~v~E~~~ 97 (721)
T 3ayj_A 87 GIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCCT
T ss_pred CceEEEEeccC
Confidence 9999999986
No 143
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.52 E-value=3.5e-07 Score=86.71 Aligned_cols=33 Identities=39% Similarity=0.566 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
.++|+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 478999999999999999999999999999997
No 144
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.51 E-value=1.3e-06 Score=83.04 Aligned_cols=100 Identities=20% Similarity=0.157 Sum_probs=74.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+|||+|..|+.+|..|++.|.+|+++++.+..... ++..+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~--------------------~~~~~~--------------- 210 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ--------------------FDPLLS--------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------SCHHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc--------------------cCHHHH---------------
Confidence 579999999999999999999999999999987542110 000000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCc-EEecCE
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDL 235 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~-~i~ad~ 235 (328)
..+.+.|.+ .+. .++.+++|++++.+++++.+++.+|+ ++++|.
T Consensus 211 ---------------------------------~~l~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~ 255 (463)
T 2r9z_A 211 ---------------------------------ATLAENMHA-QGI-ETHLEFAVAALERDAQGTTLVAQDGTRLEGFDS 255 (463)
T ss_dssp ---------------------------------HHHHHHHHH-TTC-EEESSCCEEEEEEETTEEEEEETTCCEEEEESE
T ss_pred ---------------------------------HHHHHHHHH-CCC-EEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCE
Confidence 112223322 243 47889999999987777888899998 899999
Q ss_pred EEEccCCCchh
Q 020277 236 LVGADGIWSKV 246 (328)
Q Consensus 236 VV~AdG~~S~v 246 (328)
||.|+|..+..
T Consensus 256 vv~a~G~~p~~ 266 (463)
T 2r9z_A 256 VIWAVGRAPNT 266 (463)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999988654
No 145
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.51 E-value=5.6e-07 Score=83.94 Aligned_cols=34 Identities=35% Similarity=0.468 Sum_probs=31.9
Q ss_pred CeEEEECCChHHHHHHHHHHH---CCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~---~g~~v~~~~~~~~ 111 (328)
++|+|||||++|+++|..|++ .|++|+|+|+.+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 589999999999999999999 8999999999864
No 146
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.51 E-value=2e-07 Score=87.25 Aligned_cols=36 Identities=33% Similarity=0.676 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCe--EEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~--v~~~~~~~~ 111 (328)
+.++|+|||||++|+++|..|+++|++ |+|+|+.+.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCC
Confidence 467999999999999999999999987 999999864
No 147
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.50 E-value=9.8e-07 Score=83.52 Aligned_cols=100 Identities=19% Similarity=0.211 Sum_probs=73.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
+++|+|||+|+.|+.+|..|++.|.+|+++|+.+..... +.+ .+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~---------------- 210 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS---------FDP-----------MI---------------- 210 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCH-----------HH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh---------hhH-----------HH----------------
Confidence 579999999999999999999999999999987542110 000 00
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCe-EEEEEecCcEEecCE
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDL 235 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~ad~ 235 (328)
...+.+.|.+ .+.. ++++++|++++.++++ +.+++.+|+++++|.
T Consensus 211 --------------------------------~~~l~~~l~~-~Gv~-i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~ 256 (450)
T 1ges_A 211 --------------------------------SETLVEVMNA-EGPQ-LHTNAIPKAVVKNTDGSLTLELEDGRSETVDC 256 (450)
T ss_dssp --------------------------------HHHHHHHHHH-HSCE-EECSCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred --------------------------------HHHHHHHHHH-CCCE-EEeCCEEEEEEEeCCcEEEEEECCCcEEEcCE
Confidence 0112223322 2433 7789999999876544 788888998999999
Q ss_pred EEEccCCCchh
Q 020277 236 LVGADGIWSKV 246 (328)
Q Consensus 236 VV~AdG~~S~v 246 (328)
||.|+|..+..
T Consensus 257 vv~a~G~~p~~ 267 (450)
T 1ges_A 257 LIWAIGREPAN 267 (450)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999988765
No 148
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.50 E-value=4.5e-07 Score=84.59 Aligned_cols=35 Identities=17% Similarity=0.457 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~~ 111 (328)
+++|+|||||++|+++|..|+++|+ +|+|+|+.+.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 37 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKH 37 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSS
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCC
Confidence 3689999999999999999999999 8999999863
No 149
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.49 E-value=6.6e-07 Score=84.56 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
++|+|||||++|+++|..|++. |++|+|+|+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 4899999999999999999998 999999999864
No 150
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.49 E-value=2.3e-07 Score=86.69 Aligned_cols=36 Identities=19% Similarity=0.495 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCe--EEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~--v~~~~~~~~ 111 (328)
..++|+|||||++|+++|..|++.|++ |+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 457999999999999999999999984 999999754
No 151
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.48 E-value=5.8e-07 Score=85.10 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=31.7
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
++|+|||||++|+++|..|++. |++|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 4899999999999999999998 999999999863
No 152
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.48 E-value=1.5e-06 Score=83.15 Aligned_cols=37 Identities=35% Similarity=0.529 Sum_probs=32.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++.+||+||||||+|+++|..|++.|++|+|+|+...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3568999999999999999999999999999998743
No 153
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.48 E-value=5.9e-08 Score=87.90 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHH--CCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~--~g~~v~~~~~~~~ 111 (328)
..+||+||||||+||+||+.|++ .|++|+|||+...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 46799999999999999999975 5999999999854
No 154
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.48 E-value=7.5e-07 Score=82.05 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+.+|+||||||+|+++|..|++.| +|+|+|+.+.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 3579999999999999999999999 9999999864
No 155
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.47 E-value=6.5e-07 Score=85.25 Aligned_cols=36 Identities=33% Similarity=0.546 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 457999999999999999999999999999999853
No 156
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.46 E-value=1e-06 Score=84.22 Aligned_cols=35 Identities=37% Similarity=0.500 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 46899999999999999999999999999999853
No 157
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.44 E-value=8.2e-07 Score=85.26 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=33.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+++|+|||||++|+.+|..|++.+++|||+|+.+.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 3456899999999999999999999999999999864
No 158
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.44 E-value=3.8e-06 Score=79.51 Aligned_cols=142 Identities=11% Similarity=0.064 Sum_probs=83.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~ 153 (328)
..++|+|||+|..|+.+|..|++. |.+|+++++.+............-...|.....+..+.......+.......
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~-- 303 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNT-- 303 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGG--
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhcc--
Confidence 468999999999999999999999 8999999998642111000000011234445555555333333333221100
Q ss_pred cccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHH-Hhc---CCceEecCCeEEEEEEeCCeEEEEEe---
Q 020277 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILA-KAV---GDEIILNESNVIDFKDHGDKVSVVLE--- 226 (328)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~-~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~--- 226 (328)
.+... . ..+. ..+.+.|. +.+ ....++.+++|++++.+++++.+++.
T Consensus 304 ----~~~~~-------------------~--~~~~-~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~ 357 (463)
T 3s5w_A 304 ----NYSVV-------------------D--TDLI-ERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAG 357 (463)
T ss_dssp ----TSSCB-------------------C--HHHH-HHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETT
T ss_pred ----CCCcC-------------------C--HHHH-HHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcC
Confidence 00000 0 0000 11111221 111 23458889999999998888888887
Q ss_pred cCc--EEecCEEEEccCCCch
Q 020277 227 NGQ--CYAGDLLVGADGIWSK 245 (328)
Q Consensus 227 ~g~--~i~ad~VV~AdG~~S~ 245 (328)
+|+ ++++|.||.|+|....
T Consensus 358 ~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 358 SGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp TCCEEEEEESEEEECCCEECC
T ss_pred CCCeEEEECCEEEEeeCCCCC
Confidence 665 4999999999998654
No 159
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.44 E-value=6.9e-07 Score=85.80 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=44.5
Q ss_pred EecHHHHHHHHHHhcCC--ceEecCCeEEEEEEeC--------CeEEEEEecC-----cEEecCEEEEccCCCc
Q 020277 186 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--------DKVSVVLENG-----QCYAGDLLVGADGIWS 244 (328)
Q Consensus 186 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--------~~v~v~~~~g-----~~i~ad~VV~AdG~~S 244 (328)
...|.++.+.|...+.. ..++++++|++++.++ +.|+|++.++ .++.|+.||.|+|..-
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 56788888888665422 3489999999998754 2488888765 3689999999999643
No 160
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.43 E-value=1.2e-06 Score=83.29 Aligned_cols=35 Identities=31% Similarity=0.528 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 47999999999999999999999999999999853
No 161
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.43 E-value=1.4e-06 Score=82.92 Aligned_cols=36 Identities=31% Similarity=0.552 Sum_probs=33.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 358999999999999999999999999999999863
No 162
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=2.3e-06 Score=80.99 Aligned_cols=101 Identities=19% Similarity=0.268 Sum_probs=72.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~--------------- 213 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG--------------------FEKQM--------------- 213 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------SCHHH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc--------------------cCHHH---------------
Confidence 3589999999999999999999999999999987542100 00000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEe---cCcEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NGQCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g~~i~ 232 (328)
...+.+.|.+ .+. .++++++|++++.+++++.+++. ++++++
T Consensus 214 ---------------------------------~~~l~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~ 258 (455)
T 1ebd_A 214 ---------------------------------AAIIKKRLKK-KGV-EVVTNALAKGAEEREDGVTVTYEANGETKTID 258 (455)
T ss_dssp ---------------------------------HHHHHHHHHH-TTC-EEEESEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred ---------------------------------HHHHHHHHHH-CCC-EEEeCCEEEEEEEeCCeEEEEEEeCCceeEEE
Confidence 0112223322 243 37779999999988777777765 456899
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||.|.|..+..
T Consensus 259 ~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 259 ADYVLVTVGRRPNT 272 (455)
T ss_dssp ESEEEECSCEEESC
T ss_pred cCEEEECcCCCccc
Confidence 99999999987643
No 163
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.42 E-value=1.6e-06 Score=82.71 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=32.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
...+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 35689999999999999999999999999999964
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.41 E-value=1e-06 Score=83.52 Aligned_cols=34 Identities=41% Similarity=0.604 Sum_probs=31.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 6899999999999999999999999999999853
No 165
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.40 E-value=3.5e-06 Score=78.76 Aligned_cols=101 Identities=22% Similarity=0.257 Sum_probs=73.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+...... +.+ .+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~--------~~~-----------~~~--------------- 197 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV--------AGE-----------ALS--------------- 197 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--------SCH-----------HHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh--------cCH-----------HHH---------------
Confidence 6799999999999999999999999999999986421100 000 000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeE-EEEEecCcEEecCE
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDL 235 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~i~ad~ 235 (328)
..+.+.+ +..+.. ++++++|++++.+++++ .+++.+|+++.||.
T Consensus 198 ---------------------------------~~l~~~l-~~~GV~-i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~ 242 (415)
T 3lxd_A 198 ---------------------------------EFYQAEH-RAHGVD-LRTGAAMDCIEGDGTKVTGVRMQDGSVIPADI 242 (415)
T ss_dssp ---------------------------------HHHHHHH-HHTTCE-EEETCCEEEEEESSSBEEEEEESSSCEEECSE
T ss_pred ---------------------------------HHHHHHH-HhCCCE-EEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 1112222 223433 77799999999877666 58889999999999
Q ss_pred EEEccCCCchh
Q 020277 236 LVGADGIWSKV 246 (328)
Q Consensus 236 VV~AdG~~S~v 246 (328)
||.|.|.....
T Consensus 243 Vv~a~G~~p~~ 253 (415)
T 3lxd_A 243 VIVGIGIVPCV 253 (415)
T ss_dssp EEECSCCEESC
T ss_pred EEECCCCccCh
Confidence 99999987653
No 166
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.39 E-value=1.2e-07 Score=90.87 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=33.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
+..++|+|||||++|+++|..|.++ |++|+|+|+.+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 4568999999999999999999887 899999999864
No 167
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.38 E-value=2.2e-06 Score=81.41 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+||+||||||+|+++|..|++.|++|+|+|+...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 47999999999999999999999999999997643
No 168
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.38 E-value=3.6e-06 Score=78.41 Aligned_cols=101 Identities=27% Similarity=0.396 Sum_probs=73.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+...... +.+ .+
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~--------~~~-----------~~--------------- 186 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV--------VTP-----------EI--------------- 186 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------SCH-----------HH---------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc--------cCH-----------HH---------------
Confidence 35799999999999999999999999999999886421100 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEE-EEEecCcEEecC
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGD 234 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~ad 234 (328)
...+.+.+ +..+. .++++++|++++.+++++. +++.+|+++.||
T Consensus 187 ---------------------------------~~~l~~~l-~~~GV-~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD 231 (404)
T 3fg2_P 187 ---------------------------------SSYFHDRH-SGAGI-RMHYGVRATEIAAEGDRVTGVVLSDGNTLPCD 231 (404)
T ss_dssp ---------------------------------HHHHHHHH-HHTTC-EEECSCCEEEEEEETTEEEEEEETTSCEEECS
T ss_pred ---------------------------------HHHHHHHH-HhCCc-EEEECCEEEEEEecCCcEEEEEeCCCCEEEcC
Confidence 01112222 22343 3778999999998877764 888999999999
Q ss_pred EEEEccCCCch
Q 020277 235 LLVGADGIWSK 245 (328)
Q Consensus 235 ~VV~AdG~~S~ 245 (328)
.||.|.|..+.
T Consensus 232 ~Vv~a~G~~p~ 242 (404)
T 3fg2_P 232 LVVVGVGVIPN 242 (404)
T ss_dssp EEEECCCEEEC
T ss_pred EEEECcCCccC
Confidence 99999998754
No 169
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.37 E-value=3.2e-06 Score=80.52 Aligned_cols=100 Identities=26% Similarity=0.295 Sum_probs=71.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
+++|+|||||+.|+.+|..|++.|.+|+++|+.+.... . +.+ .+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~-------~~~-----------~~---------------- 226 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA--S-------MDG-----------EV---------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS--S-------SCH-----------HH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc--c-------cCH-----------HH----------------
Confidence 58999999999999999999999999999999864211 0 000 00
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEE--eCCeEEEEEe-----cCc
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKVSVVLE-----NGQ 229 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~-----~g~ 229 (328)
...+.+.|.+ .+. .++++++|++++. +++.+.+++. +++
T Consensus 227 --------------------------------~~~l~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 272 (478)
T 1v59_A 227 --------------------------------AKATQKFLKK-QGL-DFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQE 272 (478)
T ss_dssp --------------------------------HHHHHHHHHH-TTC-EEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred --------------------------------HHHHHHHHHH-CCC-EEEeCCEEEEEEEecCCCeEEEEEEEcCCCCce
Confidence 0112222222 243 3778999999987 5666777776 456
Q ss_pred EEecCEEEEccCCCchh
Q 020277 230 CYAGDLLVGADGIWSKV 246 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~v 246 (328)
++.+|.||.|.|..+..
T Consensus 273 ~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 273 NLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp EEEESEEEECSCEEECC
T ss_pred EEECCEEEECCCCCcCC
Confidence 89999999999987654
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.37 E-value=7.1e-07 Score=82.61 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--CeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g--~~v~~~~~~~ 110 (328)
.++|+|||||++|+++|..|++.| .+|+|+|+..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 479999999999999999999999 5699999875
No 171
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.36 E-value=3.5e-06 Score=80.37 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=73.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+..... ++..+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~d~~~~-------------- 229 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK--------------------FDECIQ-------------- 229 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHHH--------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc--------------------cCHHHH--------------
Confidence 3579999999999999999999999999999988642110 000110
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCe--EEEEEecC-cEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLENG-QCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g-~~i~ 232 (328)
..+.+.|.+ .+.. ++++++|++++.++++ +.+++.+| +++.
T Consensus 230 ----------------------------------~~l~~~l~~-~Gv~-i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~ 273 (479)
T 2hqm_A 230 ----------------------------------NTITDHYVK-EGIN-VHKLSKIVKVEKNVETDKLKIHMNDSKSIDD 273 (479)
T ss_dssp ----------------------------------HHHHHHHHH-HTCE-EECSCCEEEEEECC-CCCEEEEETTSCEEEE
T ss_pred ----------------------------------HHHHHHHHh-CCeE-EEeCCEEEEEEEcCCCcEEEEEECCCcEEEE
Confidence 112233322 2433 7889999999876554 77888898 7899
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||.|.|..+..
T Consensus 274 ~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 274 VDELIWTIGRKSHL 287 (479)
T ss_dssp ESEEEECSCEEECC
T ss_pred cCEEEECCCCCCcc
Confidence 99999999987654
No 172
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.36 E-value=2.8e-06 Score=81.02 Aligned_cols=101 Identities=22% Similarity=0.194 Sum_probs=73.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||||+.|+.+|..|++.|.+|+|+|+.+..... ++..+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~--------------------~~~~~~-------------- 229 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG--------------------ADRDLV-------------- 229 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT--------------------SCHHHH--------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc--------------------cCHHHH--------------
Confidence 3689999999999999999999999999999998642110 000100
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEec----CcEE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN----GQCY 231 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~----g~~i 231 (328)
..+.+.|.+ .+ ..++++++|++++.+++++.+++.+ |+++
T Consensus 230 ----------------------------------~~l~~~l~~-~g-V~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~ 273 (482)
T 1ojt_A 230 ----------------------------------KVWQKQNEY-RF-DNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQ 273 (482)
T ss_dssp ----------------------------------HHHHHHHGG-GE-EEEECSCEEEEEEEETTEEEEEEESSSCCSSCE
T ss_pred ----------------------------------HHHHHHHHh-cC-CEEEECCEEEEEEEcCCeEEEEEeccCCCceEE
Confidence 111222221 23 3378899999999887778888887 7789
Q ss_pred ecCEEEEccCCCchh
Q 020277 232 AGDLLVGADGIWSKV 246 (328)
Q Consensus 232 ~ad~VV~AdG~~S~v 246 (328)
.+|.||.|.|.....
T Consensus 274 ~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 274 RYDAVLVAAGRAPNG 288 (482)
T ss_dssp EESCEEECCCEEECG
T ss_pred EcCEEEECcCCCcCC
Confidence 999999999987654
No 173
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.35 E-value=5.1e-06 Score=78.86 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
..++|+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3579999999999999999999999999999987
No 174
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.33 E-value=5.3e-06 Score=78.00 Aligned_cols=101 Identities=23% Similarity=0.367 Sum_probs=71.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+...... +.+ .+.
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~--------~~~-----------~~~-------------- 194 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV--------TAP-----------PVS-------------- 194 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT--------SCH-----------HHH--------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch--------hhH-----------HHH--------------
Confidence 36899999999999999999999999999999875421000 000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEE--eCCeE-EEEEecCcEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKV-SVVLENGQCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v-~v~~~~g~~i~ 232 (328)
..+.+.|. ..|.. ++++++|++++. +++++ .+++.+|+++.
T Consensus 195 ----------------------------------~~l~~~l~-~~GV~-i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~ 238 (431)
T 1q1r_A 195 ----------------------------------AFYEHLHR-EAGVD-IRTGTQVCGFEMSTDQQKVTAVLCEDGTRLP 238 (431)
T ss_dssp ----------------------------------HHHHHHHH-HHTCE-EECSCCEEEEEECTTTCCEEEEEETTSCEEE
T ss_pred ----------------------------------HHHHHHHH-hCCeE-EEeCCEEEEEEeccCCCcEEEEEeCCCCEEE
Confidence 11122222 23433 778999999987 44555 57888999999
Q ss_pred cCEEEEccCCCch
Q 020277 233 GDLLVGADGIWSK 245 (328)
Q Consensus 233 ad~VV~AdG~~S~ 245 (328)
+|.||.|.|..+.
T Consensus 239 ~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 239 ADLVIAGIGLIPN 251 (431)
T ss_dssp CSEEEECCCEEEC
T ss_pred cCEEEECCCCCcC
Confidence 9999999997653
No 175
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.33 E-value=5.6e-06 Score=78.73 Aligned_cols=101 Identities=20% Similarity=0.323 Sum_probs=74.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~-g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~ 154 (328)
..++|+|||+|+.|+.+|..|++. |.+|+++++.+...... +.+ .+
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~--------~~~-----------~~-------------- 204 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF--------TSK-----------SL-------------- 204 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT--------SCH-----------HH--------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc--------cCH-----------HH--------------
Confidence 468999999999999999999999 99999999875321100 000 00
Q ss_pred ccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecC
Q 020277 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (328)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad 234 (328)
...+.+.|. ..+. .++.+++|++++.+++++++++.+|+++.+|
T Consensus 205 ----------------------------------~~~l~~~l~-~~GV-~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD 248 (472)
T 3iwa_A 205 ----------------------------------SQMLRHDLE-KNDV-VVHTGEKVVRLEGENGKVARVITDKRTLDAD 248 (472)
T ss_dssp ----------------------------------HHHHHHHHH-HTTC-EEECSCCEEEEEESSSBEEEEEESSCEEECS
T ss_pred ----------------------------------HHHHHHHHH-hcCC-EEEeCCEEEEEEccCCeEEEEEeCCCEEEcC
Confidence 011222222 2243 3778999999998778888889999999999
Q ss_pred EEEEccCCCch
Q 020277 235 LLVGADGIWSK 245 (328)
Q Consensus 235 ~VV~AdG~~S~ 245 (328)
.||.|.|.++.
T Consensus 249 ~Vv~a~G~~p~ 259 (472)
T 3iwa_A 249 LVILAAGVSPN 259 (472)
T ss_dssp EEEECSCEEEC
T ss_pred EEEECCCCCcC
Confidence 99999998754
No 176
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.33 E-value=2.5e-06 Score=80.42 Aligned_cols=33 Identities=33% Similarity=0.577 Sum_probs=29.8
Q ss_pred eEEEECCChHHHHHHHHHHHCC--CeEEEEccCCc
Q 020277 79 RILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g--~~v~~~~~~~~ 111 (328)
+|+||||||+|+++|..|++.| .+|+|+|+.+.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRD 36 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 6999999999999999999988 57999999753
No 177
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.33 E-value=2.6e-06 Score=79.56 Aligned_cols=101 Identities=21% Similarity=0.373 Sum_probs=73.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+... +. .++..+.
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-------------~~------~~~~~~~-------------- 188 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-------------VR------VLGRRIG-------------- 188 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------HH------HHCHHHH--------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------hh------hcCHHHH--------------
Confidence 36899999999999999999999999999999886421 00 0000000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
..+.+.|. ..+.. ++++++|++++.++....+++.+|+++++|.
T Consensus 189 ----------------------------------~~l~~~l~-~~GV~-i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~ 232 (410)
T 3ef6_A 189 ----------------------------------AWLRGLLT-ELGVQ-VELGTGVVGFSGEGQLEQVMASDGRSFVADS 232 (410)
T ss_dssp ----------------------------------HHHHHHHH-HHTCE-EECSCCEEEEECSSSCCEEEETTSCEEECSE
T ss_pred ----------------------------------HHHHHHHH-HCCCE-EEeCCEEEEEeccCcEEEEEECCCCEEEcCE
Confidence 11122222 23433 7789999999876654578889999999999
Q ss_pred EEEccCCCch
Q 020277 236 LVGADGIWSK 245 (328)
Q Consensus 236 VV~AdG~~S~ 245 (328)
||.|.|..+.
T Consensus 233 Vv~a~G~~p~ 242 (410)
T 3ef6_A 233 ALICVGAEPA 242 (410)
T ss_dssp EEECSCEEEC
T ss_pred EEEeeCCeec
Confidence 9999998764
No 178
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=5.4e-06 Score=79.48 Aligned_cols=100 Identities=21% Similarity=0.272 Sum_probs=72.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
+++|+|||+|+.|+.+|..|++.|.+|+++|+.+..... ++..+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~d~~~~--------------- 220 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK--------------------FDESVI--------------- 220 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT--------------------SCHHHH---------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc--------------------cchhhH---------------
Confidence 679999999999999999999999999999987642110 000100
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCC-eEEEEEecCcE-EecC
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQC-YAGD 234 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~-i~ad 234 (328)
..+.+.|.+ .+. .++++++|++++.+++ .+.+++.+|++ +.+|
T Consensus 221 ---------------------------------~~l~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D 265 (500)
T 1onf_A 221 ---------------------------------NVLENDMKK-NNI-NIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFD 265 (500)
T ss_dssp ---------------------------------HHHHHHHHH-TTC-EEECSCCEEEEEESSTTCEEEEETTSCEEEEES
T ss_pred ---------------------------------HHHHHHHHh-CCC-EEEECCEEEEEEEcCCceEEEEECCCcEEEECC
Confidence 112233322 243 3788999999987653 47788889987 9999
Q ss_pred EEEEccCCCchh
Q 020277 235 LLVGADGIWSKV 246 (328)
Q Consensus 235 ~VV~AdG~~S~v 246 (328)
.||.|.|.....
T Consensus 266 ~vi~a~G~~p~~ 277 (500)
T 1onf_A 266 HVIYCVGRSPDT 277 (500)
T ss_dssp EEEECCCBCCTT
T ss_pred EEEECCCCCcCC
Confidence 999999987654
No 179
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.33 E-value=4.9e-06 Score=79.74 Aligned_cols=101 Identities=19% Similarity=0.259 Sum_probs=74.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~--------------- 225 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY---------EDA-----------DA--------------- 225 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC---------SSH-----------HH---------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---------cCH-----------HH---------------
Confidence 3579999999999999999999999999999988642110 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
...+.+.|. ..|. .++++++|++++.+++++.+.+.+|+++++|.
T Consensus 226 ---------------------------------~~~l~~~l~-~~GV-~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~ 270 (499)
T 1xdi_A 226 ---------------------------------ALVLEESFA-ERGV-RLFKNARAASVTRTGAGVLVTMTDGRTVEGSH 270 (499)
T ss_dssp ---------------------------------HHHHHHHHH-HTTC-EEETTCCEEEEEECSSSEEEEETTSCEEEESE
T ss_pred ---------------------------------HHHHHHHHH-HCCC-EEEeCCEEEEEEEeCCEEEEEECCCcEEEcCE
Confidence 011222222 2343 37889999999987777888888888999999
Q ss_pred EEEccCCCchh
Q 020277 236 LVGADGIWSKV 246 (328)
Q Consensus 236 VV~AdG~~S~v 246 (328)
||.|.|.++..
T Consensus 271 Vv~a~G~~p~~ 281 (499)
T 1xdi_A 271 ALMTIGSVPNT 281 (499)
T ss_dssp EEECCCEEECC
T ss_pred EEECCCCCcCC
Confidence 99999988754
No 180
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.32 E-value=2.7e-06 Score=83.39 Aligned_cols=35 Identities=29% Similarity=0.463 Sum_probs=32.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
...+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 35689999999999999999999999999999984
No 181
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.32 E-value=6.6e-06 Score=78.72 Aligned_cols=100 Identities=21% Similarity=0.217 Sum_probs=74.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~--------------- 217 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL---------QDE-----------EM--------------- 217 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC---------CCH-----------HH---------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc---------CCH-----------HH---------------
Confidence 4689999999999999999999999999999998642100 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEe--cC--cEE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCY 231 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g--~~i 231 (328)
...+.+.|.+ . ..++++++|++++.+++++++++. +| .++
T Consensus 218 ---------------------------------~~~l~~~l~~--~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i 261 (492)
T 3ic9_A 218 ---------------------------------KRYAEKTFNE--E-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTE 261 (492)
T ss_dssp ---------------------------------HHHHHHHHHT--T-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEE
T ss_pred ---------------------------------HHHHHHHHhh--C-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEE
Confidence 1112333332 2 448889999999988888888876 67 689
Q ss_pred ecCEEEEccCCCchh
Q 020277 232 AGDLLVGADGIWSKV 246 (328)
Q Consensus 232 ~ad~VV~AdG~~S~v 246 (328)
.+|.||.|.|.....
T Consensus 262 ~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 262 SFQYVLAATGRKANV 276 (492)
T ss_dssp EESEEEECSCCEESC
T ss_pred ECCEEEEeeCCccCC
Confidence 999999999987543
No 182
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.31 E-value=5.4e-06 Score=79.97 Aligned_cols=99 Identities=15% Similarity=0.197 Sum_probs=72.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccccc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~~ 157 (328)
++|+|||+|..|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---------~~~-----------~~----------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI---------KDN-----------ET----------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC---------CSH-----------HH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc---------ccH-----------HH-----------------
Confidence 89999999999999999999999999999998642100 000 00
Q ss_pred cccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCe----EEEEEecCc-EEe
Q 020277 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK----VSVVLENGQ-CYA 232 (328)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~----v~v~~~~g~-~i~ 232 (328)
...+.+.|.+ .|. .++++++|++++.++++ +.+++.+|+ +++
T Consensus 258 -------------------------------~~~l~~~l~~-~GV-~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~ 304 (523)
T 1mo9_A 258 -------------------------------RAYVLDRMKE-QGM-EIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIE 304 (523)
T ss_dssp -------------------------------HHHHHHHHHH-TTC-EEESSCEEEEEEECTTSBEEEEEEEETTEEEEEE
T ss_pred -------------------------------HHHHHHHHHh-CCc-EEEECCEEEEEEEcCCCceEEEEEEECCCcEEEE
Confidence 0112233322 343 47889999999876555 778888887 899
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||.|.|.++..
T Consensus 305 aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 305 TDFVFLGLGEQPRS 318 (523)
T ss_dssp CSCEEECCCCEECC
T ss_pred cCEEEECcCCccCC
Confidence 99999999998765
No 183
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.31 E-value=6.5e-06 Score=78.16 Aligned_cols=102 Identities=28% Similarity=0.312 Sum_probs=72.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+..... ++..+
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~d~~~--------------- 217 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT--------------------LDEDV--------------- 217 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------SCHHH---------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc--------------------CCHHH---------------
Confidence 3589999999999999999999999999999988642110 00000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEe--cC--cEE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCY 231 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~--~g--~~i 231 (328)
...+.+.|.+..+. .++++++|++++.+++++.+.+. +| +++
T Consensus 218 ---------------------------------~~~l~~~l~~~~gv-~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i 263 (468)
T 2qae_A 218 ---------------------------------TNALVGALAKNEKM-KFMTSTKVVGGTNNGDSVSLEVEGKNGKRETV 263 (468)
T ss_dssp ---------------------------------HHHHHHHHHHHTCC-EEECSCEEEEEEECSSSEEEEEECC---EEEE
T ss_pred ---------------------------------HHHHHHHHhhcCCc-EEEeCCEEEEEEEcCCeEEEEEEcCCCceEEE
Confidence 11223333122343 37789999999887777777776 66 689
Q ss_pred ecCEEEEccCCCchh
Q 020277 232 AGDLLVGADGIWSKV 246 (328)
Q Consensus 232 ~ad~VV~AdG~~S~v 246 (328)
++|.||.|.|..+..
T Consensus 264 ~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 264 TCEALLVSVGRRPFT 278 (468)
T ss_dssp EESEEEECSCEEECC
T ss_pred ECCEEEECCCcccCC
Confidence 999999999988654
No 184
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.30 E-value=6e-06 Score=78.66 Aligned_cols=36 Identities=36% Similarity=0.421 Sum_probs=33.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
...+||+||||||+|+++|..|++.|++|+|+|+..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 346899999999999999999999999999999763
No 185
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.29 E-value=2.2e-06 Score=82.19 Aligned_cols=34 Identities=35% Similarity=0.431 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHC---CCeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~---g~~v~~~~~~~ 110 (328)
.++|+|||||++|+++|..|++. |++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 37899999999999999999999 99999999985
No 186
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.29 E-value=6.1e-06 Score=78.75 Aligned_cols=102 Identities=25% Similarity=0.336 Sum_probs=76.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+..|..|++.|.+|+++++.+..... +.+ .+
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~---------~~~-----------~~--------------- 234 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN---------FDY-----------DL--------------- 234 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCH-----------HH---------------
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc---------cCH-----------HH---------------
Confidence 4679999999999999999999999999999987642110 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
...+.+.|.+ .+.. ++.+++|++++.+++++.+++.+|+++++|.
T Consensus 235 ---------------------------------~~~l~~~l~~-~Gv~-i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~ 279 (484)
T 3o0h_A 235 ---------------------------------RQLLNDAMVA-KGIS-IIYEATVSQVQSTENCYNVVLTNGQTICADR 279 (484)
T ss_dssp ---------------------------------HHHHHHHHHH-HTCE-EESSCCEEEEEECSSSEEEEETTSCEEEESE
T ss_pred ---------------------------------HHHHHHHHHH-CCCE-EEeCCEEEEEEeeCCEEEEEECCCcEEEcCE
Confidence 0112333322 2444 7889999999988888889999999999999
Q ss_pred EEEccCCCchhh
Q 020277 236 LVGADGIWSKVR 247 (328)
Q Consensus 236 VV~AdG~~S~vr 247 (328)
||.|.|..+...
T Consensus 280 Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 280 VMLATGRVPNTT 291 (484)
T ss_dssp EEECCCEEECCT
T ss_pred EEEeeCCCcCCC
Confidence 999999876543
No 187
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.29 E-value=7.3e-06 Score=77.73 Aligned_cols=101 Identities=28% Similarity=0.399 Sum_probs=72.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+..... ++..+.
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~~-------------- 215 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN--------------------EDADVS-------------- 215 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT--------------------SCHHHH--------------
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc--------------------cCHHHH--------------
Confidence 3579999999999999999999999999999998642110 000100
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEe-cC--cEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-NG--QCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~-~g--~~i~ 232 (328)
..+.+.|.+ .+.. ++++++|++++.+++++.+.+. +| +++.
T Consensus 216 ----------------------------------~~l~~~l~~-~gv~-i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~ 259 (464)
T 2a8x_A 216 ----------------------------------KEIEKQFKK-LGVT-ILTATKVESIADGGSQVTVTVTKDGVAQELK 259 (464)
T ss_dssp ----------------------------------HHHHHHHHH-HTCE-EECSCEEEEEEECSSCEEEEEESSSCEEEEE
T ss_pred ----------------------------------HHHHHHHHH-cCCE-EEeCcEEEEEEEcCCeEEEEEEcCCceEEEE
Confidence 111222222 2433 7889999999887767777776 66 6899
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||.|.|.....
T Consensus 260 ~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 260 AEKVLQAIGFAPNV 273 (464)
T ss_dssp ESEEEECSCEEECC
T ss_pred cCEEEECCCCCccC
Confidence 99999999987643
No 188
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.28 E-value=6.3e-06 Score=78.93 Aligned_cols=101 Identities=24% Similarity=0.291 Sum_probs=73.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC---CCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~---g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~ 152 (328)
.+++|+|||+|..|+.+|..|++. |.+|+++++.+..... ++..+
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------~d~~~------------ 237 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG--------------------FDETI------------ 237 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT--------------------SCHHH------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc--------------------cCHHH------------
Confidence 357999999999999999999999 9999999987642110 00000
Q ss_pred ccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCC-eEEEEEecCcEE
Q 020277 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCY 231 (328)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i 231 (328)
...+.+.|.+ .+. .++++++|++++.+++ .+.+++.+|+++
T Consensus 238 ------------------------------------~~~l~~~l~~-~GV-~i~~~~~v~~i~~~~~~~~~v~~~~G~~i 279 (495)
T 2wpf_A 238 ------------------------------------REEVTKQLTA-NGI-EIMTNENPAKVSLNTDGSKHVTFESGKTL 279 (495)
T ss_dssp ------------------------------------HHHHHHHHHH-TTC-EEEESCCEEEEEECTTSCEEEEETTSCEE
T ss_pred ------------------------------------HHHHHHHHHh-CCC-EEEeCCEEEEEEEcCCceEEEEECCCcEE
Confidence 0112233322 243 3778999999987654 477888899899
Q ss_pred ecCEEEEccCCCchh
Q 020277 232 AGDLLVGADGIWSKV 246 (328)
Q Consensus 232 ~ad~VV~AdG~~S~v 246 (328)
++|.||.|.|.....
T Consensus 280 ~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 280 DVDVVMMAIGRIPRT 294 (495)
T ss_dssp EESEEEECSCEEECC
T ss_pred EcCEEEECCCCcccc
Confidence 999999999987654
No 189
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.28 E-value=6.7e-06 Score=78.63 Aligned_cols=101 Identities=25% Similarity=0.251 Sum_probs=73.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC---CCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~---g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~ 152 (328)
.+++++|||+|+.|+.+|..|++. |.+|+++|+.+..... ++..+
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------~d~~~------------ 233 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG--------------------FDSEL------------ 233 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT--------------------SCHHH------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc--------------------cCHHH------------
Confidence 357999999999999999999999 9999999998642110 00000
Q ss_pred ccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCC-eEEEEEecCcEE
Q 020277 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCY 231 (328)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~i 231 (328)
...+.+.|.+ .+ ..++++++|++++.+++ .+.+++.+|+++
T Consensus 234 ------------------------------------~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~~~~v~~~~G~~i 275 (490)
T 1fec_A 234 ------------------------------------RKQLTEQLRA-NG-INVRTHENPAKVTKNADGTRHVVFESGAEA 275 (490)
T ss_dssp ------------------------------------HHHHHHHHHH-TT-EEEEETCCEEEEEECTTSCEEEEETTSCEE
T ss_pred ------------------------------------HHHHHHHHHh-CC-CEEEeCCEEEEEEEcCCCEEEEEECCCcEE
Confidence 0112222322 23 34778999999987654 478888899899
Q ss_pred ecCEEEEccCCCchh
Q 020277 232 AGDLLVGADGIWSKV 246 (328)
Q Consensus 232 ~ad~VV~AdG~~S~v 246 (328)
++|.||.|.|.++..
T Consensus 276 ~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 276 DYDVVMLAIGRVPRS 290 (490)
T ss_dssp EESEEEECSCEEESC
T ss_pred EcCEEEEccCCCcCc
Confidence 999999999987654
No 190
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.28 E-value=1e-06 Score=84.36 Aligned_cols=109 Identities=18% Similarity=0.247 Sum_probs=70.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+|||||++|+++|..|+++ ++|+|+|+.+.. .|. . .. . . ...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~---GG~----~--~~--------~-----------~----~~~- 153 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL---GGD----M--WL--------K-----------G----IKQ- 153 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS---SCS----G--GG--------T-----------C----SEE-
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC---CCe----e--ec--------c-----------c----ccc-
Confidence 46899999999999999999999 999999998642 111 0 00 0 0 000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcC-CceEecCCeEEEEEEeCCeEEEEE-ecCc--EEe
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG-DEIILNESNVIDFKDHGDKVSVVL-ENGQ--CYA 232 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~-~~~i~~~~~v~~i~~~~~~v~v~~-~~g~--~i~ 232 (328)
.+.+ . ...++.+.+.+.+. ...++++++|.++..++..+.+.. .+++ ++.
T Consensus 154 ----------------------~g~~--~--~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 207 (493)
T 1y56_A 154 ----------------------EGFN--K--DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEIL 207 (493)
T ss_dssp ----------------------TTTT--E--EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEE
T ss_pred ----------------------CCCC--C--CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEE
Confidence 0001 0 22333444444432 233677888988887776665544 4454 689
Q ss_pred cCEEEEccCCCch
Q 020277 233 GDLLVGADGIWSK 245 (328)
Q Consensus 233 ad~VV~AdG~~S~ 245 (328)
+|.||+|+|....
T Consensus 208 ~d~lvlAtGa~~~ 220 (493)
T 1y56_A 208 AKRVVLATGAIDS 220 (493)
T ss_dssp ESCEEECCCEEEC
T ss_pred CCEEEECCCCCcc
Confidence 9999999997653
No 191
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.27 E-value=8.9e-06 Score=79.02 Aligned_cols=100 Identities=19% Similarity=0.261 Sum_probs=71.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~--------------- 194 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP---------VDR-----------EM--------------- 194 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT---------SCH-----------HH---------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh---------cCH-----------HH---------------
Confidence 3579999999999999999999999999999998642110 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEE-------------------
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD------------------- 216 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~------------------- 216 (328)
...+.+.|.+ .+.. ++++++|++++.
T Consensus 195 ---------------------------------~~~l~~~l~~-~GV~-i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 239 (565)
T 3ntd_A 195 ---------------------------------AGFAHQAIRD-QGVD-LRLGTALSEVSYQVQTHVASDAAGEDTAHQH 239 (565)
T ss_dssp ---------------------------------HHHHHHHHHH-TTCE-EEETCCEEEEEEECCCCCCCGGGTCCCTTCC
T ss_pred ---------------------------------HHHHHHHHHH-CCCE-EEeCCeEEEEecccccccccccccccccccc
Confidence 0111222222 2333 666888888876
Q ss_pred eCCeEEEEEecCcEEecCEEEEccCCCch
Q 020277 217 HGDKVSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 217 ~~~~v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
+++++++++.+|+++++|.||.|.|....
T Consensus 240 ~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 240 IKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp TTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred CCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 36678888889999999999999998764
No 192
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.27 E-value=2.3e-07 Score=88.89 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+||+||||||+|+++|..|++.|++|+|+|+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4799999999999999999999999999999964
No 193
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.26 E-value=7.1e-06 Score=79.34 Aligned_cols=35 Identities=34% Similarity=0.518 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+||+|||+||+|+.+|..+++.|.+|.|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 47999999999999999999999999999998754
No 194
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.25 E-value=1e-05 Score=75.41 Aligned_cols=97 Identities=25% Similarity=0.340 Sum_probs=68.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+...... +.+ .+
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~~~-----------~~--------------- 189 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA--------APA-----------TL--------------- 189 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------SCH-----------HH---------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc--------cCH-----------HH---------------
Confidence 36899999999999999999999999999999986421100 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
...+.+.|. ..+. .++.+++|++++ + + .+++.+|+++++|.
T Consensus 190 ---------------------------------~~~l~~~l~-~~GV-~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~ 230 (408)
T 2gqw_A 190 ---------------------------------ADFVARYHA-AQGV-DLRFERSVTGSV-D-G--VVLLDDGTRIAADM 230 (408)
T ss_dssp ---------------------------------HHHHHHHHH-HTTC-EEEESCCEEEEE-T-T--EEEETTSCEEECSE
T ss_pred ---------------------------------HHHHHHHHH-HcCc-EEEeCCEEEEEE-C-C--EEEECCCCEEEcCE
Confidence 011122222 2243 377789999998 3 3 66778999999999
Q ss_pred EEEccCCCch
Q 020277 236 LVGADGIWSK 245 (328)
Q Consensus 236 VV~AdG~~S~ 245 (328)
||.|.|....
T Consensus 231 vi~a~G~~p~ 240 (408)
T 2gqw_A 231 VVVGIGVLAN 240 (408)
T ss_dssp EEECSCEEEC
T ss_pred EEECcCCCcc
Confidence 9999998753
No 195
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.24 E-value=7.4e-06 Score=75.32 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
++|+|||||++|+.+|+.|+++|++|+|+|+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 589999999999999999999999999999876
No 196
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.24 E-value=7.3e-06 Score=77.34 Aligned_cols=99 Identities=22% Similarity=0.263 Sum_probs=68.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|++|+.+|..|++.|.+|+++|+.+..... .++..+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~--------------- 193 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------------YLDKEF--------------- 193 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------TCCHHH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------------cCCHHH---------------
Confidence 4689999999999999999999999999999998542100 000000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeE-EEEEecCcEEecC
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGD 234 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~i~ad 234 (328)
...+.+.|.+ .+ ..++++++|++++.+ +++ .+.+ +++++++|
T Consensus 194 ---------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d 236 (447)
T 1nhp_A 194 ---------------------------------TDVLTEEMEA-NN-ITIATGETVERYEGD-GRVQKVVT-DKNAYDAD 236 (447)
T ss_dssp ---------------------------------HHHHHHHHHT-TT-EEEEESCCEEEEECS-SBCCEEEE-SSCEEECS
T ss_pred ---------------------------------HHHHHHHHHh-CC-CEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECC
Confidence 0112222222 23 347788999999865 444 3444 66789999
Q ss_pred EEEEccCCCch
Q 020277 235 LLVGADGIWSK 245 (328)
Q Consensus 235 ~VV~AdG~~S~ 245 (328)
.||.|.|..+.
T Consensus 237 ~vi~a~G~~p~ 247 (447)
T 1nhp_A 237 LVVVAVGVRPN 247 (447)
T ss_dssp EEEECSCEEES
T ss_pred EEEECcCCCCC
Confidence 99999998764
No 197
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.24 E-value=8.3e-06 Score=77.57 Aligned_cols=101 Identities=21% Similarity=0.229 Sum_probs=71.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
+++|+|||+|+.|+.+|..|++.|.+|+++|+.+..... . +.+ .+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~-------~~~-----------~~---------------- 222 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-G-------IDM-----------EI---------------- 222 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-S-------CCH-----------HH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-c-------cCH-----------HH----------------
Confidence 579999999999999999999999999999998642110 0 000 00
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCe-EEEEE-----ecCcE
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVL-----ENGQC 230 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~-----~~g~~ 230 (328)
...+.+.|.+ .+. .++++++|++++.++++ +.+++ .++++
T Consensus 223 --------------------------------~~~l~~~l~~-~Gv-~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~ 268 (474)
T 1zmd_A 223 --------------------------------SKNFQRILQK-QGF-KFKLNTKVTGATKKSDGKIDVSIEAASGGKAEV 268 (474)
T ss_dssp --------------------------------HHHHHHHHHH-TTC-EEECSEEEEEEEECTTSCEEEEEEETTSCCCEE
T ss_pred --------------------------------HHHHHHHHHH-CCC-EEEeCceEEEEEEcCCceEEEEEEecCCCCceE
Confidence 0112223322 243 47889999999887766 77664 35678
Q ss_pred EecCEEEEccCCCchh
Q 020277 231 YAGDLLVGADGIWSKV 246 (328)
Q Consensus 231 i~ad~VV~AdG~~S~v 246 (328)
+++|.||.|.|..+..
T Consensus 269 i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 269 ITCDVLLVCIGRRPFT 284 (474)
T ss_dssp EEESEEEECSCEEECC
T ss_pred EEcCEEEECcCCCcCC
Confidence 9999999999987643
No 198
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=6e-06 Score=78.42 Aligned_cols=101 Identities=25% Similarity=0.334 Sum_probs=72.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++|+.+..... ++..+
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~--------------------~~~~~--------------- 220 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT--------------------MDAEI--------------- 220 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT--------------------SCHHH---------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc--------------------ccHHH---------------
Confidence 3589999999999999999999999999999998642110 00000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEe---cC--cE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NG--QC 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g--~~ 230 (328)
...+.+.|.+ .+.. ++++++|++++.+++++.+++. +| ++
T Consensus 221 ---------------------------------~~~l~~~l~~-~gv~-i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 265 (470)
T 1dxl_A 221 ---------------------------------RKQFQRSLEK-QGMK-FKLKTKVVGVDTSGDGVKLTVEPSAGGEQTI 265 (470)
T ss_dssp ---------------------------------HHHHHHHHHH-SSCC-EECSEEEEEEECSSSSEEEEEEESSSCCCEE
T ss_pred ---------------------------------HHHHHHHHHH-cCCE-EEeCCEEEEEEEcCCeEEEEEEecCCCcceE
Confidence 0112233322 3433 7789999999877666777765 45 68
Q ss_pred EecCEEEEccCCCchh
Q 020277 231 YAGDLLVGADGIWSKV 246 (328)
Q Consensus 231 i~ad~VV~AdG~~S~v 246 (328)
+.+|.||.|.|..+..
T Consensus 266 ~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 266 IEADVVLVSAGRTPFT 281 (470)
T ss_dssp EEESEEECCCCEEECC
T ss_pred EECCEEEECCCCCcCC
Confidence 9999999999987653
No 199
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.23 E-value=1.6e-05 Score=75.99 Aligned_cols=101 Identities=26% Similarity=0.321 Sum_probs=72.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~d~-----------~~--------------- 241 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG---------MDG-----------EV--------------- 241 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS---------SCH-----------HH---------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc---------CCH-----------HH---------------
Confidence 4579999999999999999999999999999987642110 000 10
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEec---C--cE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---G--QC 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~---g--~~ 230 (328)
...+.+.|.+ .+. .++.+++|++++.+++++.+++.+ | .+
T Consensus 242 ---------------------------------~~~l~~~l~~-~gV-~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 286 (491)
T 3urh_A 242 ---------------------------------AKQLQRMLTK-QGI-DFKLGAKVTGAVKSGDGAKVTFEPVKGGEATT 286 (491)
T ss_dssp ---------------------------------HHHHHHHHHH-TTC-EEECSEEEEEEEEETTEEEEEEEETTSCCCEE
T ss_pred ---------------------------------HHHHHHHHHh-CCC-EEEECCeEEEEEEeCCEEEEEEEecCCCceEE
Confidence 0112222222 233 377899999999888888887764 5 58
Q ss_pred EecCEEEEccCCCchh
Q 020277 231 YAGDLLVGADGIWSKV 246 (328)
Q Consensus 231 i~ad~VV~AdG~~S~v 246 (328)
+++|.||.|.|.....
T Consensus 287 i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 287 LDAEVVLIATGRKPST 302 (491)
T ss_dssp EEESEEEECCCCEECC
T ss_pred EEcCEEEEeeCCccCC
Confidence 9999999999987644
No 200
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.22 E-value=6.6e-07 Score=85.70 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=40.2
Q ss_pred HHHHHHHHHhcCC--ceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCc
Q 020277 190 MTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWS 244 (328)
Q Consensus 190 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S 244 (328)
..|.+.|.+.+.. ..++++++|++|..+++.+ ++.+|+++.||.||.+.-...
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v--~~~~G~~~~ad~vI~t~P~~~ 276 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTV--TLQDGTTIGYKKLVSTMAVDF 276 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEE--EETTSCEEEEEEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCEE--EEcCCCEEECCEEEECCCHHH
Confidence 4566777776643 4588999999998877654 578999999999998765443
No 201
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.22 E-value=1.2e-05 Score=76.30 Aligned_cols=99 Identities=19% Similarity=0.163 Sum_probs=73.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+...... +.
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------~d----------------------------- 213 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL--------ED----------------------------- 213 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS--------CC-----------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC--------CC-----------------------------
Confidence 45899999999999999999999999999999876421100 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeC-CeEEEEEe--cCc--E
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHG-DKVSVVLE--NGQ--C 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-~~v~v~~~--~g~--~ 230 (328)
.++.+.+.+.+. ..++.+++|++++.++ +++.+.+. +|+ +
T Consensus 214 ----------------------------------~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~ 258 (466)
T 3l8k_A 214 ----------------------------------QDIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKS 258 (466)
T ss_dssp ----------------------------------HHHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEE
T ss_pred ----------------------------------HHHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEE
Confidence 011222222223 3477899999998877 78888887 665 8
Q ss_pred EecCEEEEccCCCchh
Q 020277 231 YAGDLLVGADGIWSKV 246 (328)
Q Consensus 231 i~ad~VV~AdG~~S~v 246 (328)
+++|.||.|.|.....
T Consensus 259 i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 259 IFTNSVVLAAGRRPVI 274 (466)
T ss_dssp EEESCEEECCCEEECC
T ss_pred EEcCEEEECcCCCccc
Confidence 9999999999987644
No 202
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.21 E-value=1.3e-05 Score=75.63 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=71.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|..|+.+|..|++.|.+|+++|+.+...... ++..+
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------~~~~~--------------- 193 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY-------------------FDKEF--------------- 193 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-------------------SCHHH---------------
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-------------------hhhhH---------------
Confidence 35799999999999999999999999999999875421100 00000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
...+.+.|.+ .+. .++++++|++++.+++++.....+|+++++|.
T Consensus 194 ---------------------------------~~~l~~~l~~-~Gv-~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~ 238 (452)
T 2cdu_A 194 ---------------------------------TDILAKDYEA-HGV-NLVLGSKVAAFEEVDDEIITKTLDGKEIKSDI 238 (452)
T ss_dssp ---------------------------------HHHHHHHHHH-TTC-EEEESSCEEEEEEETTEEEEEETTSCEEEESE
T ss_pred ---------------------------------HHHHHHHHHH-CCC-EEEcCCeeEEEEcCCCeEEEEEeCCCEEECCE
Confidence 0111222222 243 37789999999876676754445888999999
Q ss_pred EEEccCCCch
Q 020277 236 LVGADGIWSK 245 (328)
Q Consensus 236 VV~AdG~~S~ 245 (328)
||.|.|....
T Consensus 239 vv~a~G~~p~ 248 (452)
T 2cdu_A 239 AILCIGFRPN 248 (452)
T ss_dssp EEECCCEEEC
T ss_pred EEECcCCCCC
Confidence 9999998764
No 203
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.21 E-value=1.6e-05 Score=75.46 Aligned_cols=99 Identities=17% Similarity=0.166 Sum_probs=71.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.... ..+ .+
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~~~-----------~~--------------- 218 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR----------EDP-----------AI--------------- 218 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT----------SCH-----------HH---------------
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC----------CCH-----------HH---------------
Confidence 357999999999999999999999999999998753211 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
...+.+.|.+ .+. .++.+++|++++.+++.+.+.+. ++++++|.
T Consensus 219 ---------------------------------~~~l~~~l~~-~Gv-~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~ 262 (467)
T 1zk7_A 219 ---------------------------------GEAVTAAFRA-EGI-EVLEHTQASQVAHMDGEFVLTTT-HGELRADK 262 (467)
T ss_dssp ---------------------------------HHHHHHHHHH-TTC-EEETTCCEEEEEEETTEEEEEET-TEEEEESE
T ss_pred ---------------------------------HHHHHHHHHh-CCC-EEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCE
Confidence 0112222222 243 37889999999887777777665 56899999
Q ss_pred EEEccCCCchh
Q 020277 236 LVGADGIWSKV 246 (328)
Q Consensus 236 VV~AdG~~S~v 246 (328)
||.|.|.++..
T Consensus 263 Vv~a~G~~p~~ 273 (467)
T 1zk7_A 263 LLVATGRTPNT 273 (467)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999998764
No 204
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=6.4e-06 Score=78.07 Aligned_cols=99 Identities=20% Similarity=0.261 Sum_probs=68.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||||++|+.+|..|++.|.+|+|+|+.+.... . +.+ .+.
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~-------~~~-----------~~~-------------- 215 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP--T-------YDS-----------ELT-------------- 215 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST--T-------SCH-----------HHH--------------
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc--c-------cCH-----------HHH--------------
Confidence 457999999999999999999999999999999864211 0 000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecC--cEEec
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG--QCYAG 233 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g--~~i~a 233 (328)
..+.+.|.+ .+.. ++.+++|++++. +.+++...+| .++.+
T Consensus 216 ----------------------------------~~l~~~l~~-~gv~-i~~~~~v~~i~~--~~v~v~~~~G~~~~i~~ 257 (458)
T 1lvl_A 216 ----------------------------------APVAESLKK-LGIA-LHLGHSVEGYEN--GCLLANDGKGGQLRLEA 257 (458)
T ss_dssp ----------------------------------HHHHHHHHH-HTCE-EETTCEEEEEET--TEEEEECSSSCCCEECC
T ss_pred ----------------------------------HHHHHHHHH-CCCE-EEECCEEEEEEe--CCEEEEECCCceEEEEC
Confidence 111222322 2433 788999999976 3365554456 58999
Q ss_pred CEEEEccCCCchh
Q 020277 234 DLLVGADGIWSKV 246 (328)
Q Consensus 234 d~VV~AdG~~S~v 246 (328)
|.||.|.|.....
T Consensus 258 D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 258 DRVLVAVGRRPRT 270 (458)
T ss_dssp SCEEECCCEEECC
T ss_pred CEEEECcCCCcCC
Confidence 9999999987654
No 205
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.19 E-value=2.4e-05 Score=73.94 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=71.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++++|||+|..|+.+|..|++.|.+|+++++.+...... +.+ .+.
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~d~-----------~~~-------------- 192 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY--------FDK-----------EMV-------------- 192 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT--------CCH-----------HHH--------------
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc--------CCH-----------HHH--------------
Confidence 35899999999999999999999999999999886421100 000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
..+.+.|.+ .+ ..++.+++|++++.+++++.+.+.++ ++++|.
T Consensus 193 ----------------------------------~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~ 235 (452)
T 3oc4_A 193 ----------------------------------AEVQKSLEK-QA-VIFHFEETVLGIEETANGIVLETSEQ-EISCDS 235 (452)
T ss_dssp ----------------------------------HHHHHHHHT-TT-EEEEETCCEEEEEECSSCEEEEESSC-EEEESE
T ss_pred ----------------------------------HHHHHHHHH-cC-CEEEeCCEEEEEEccCCeEEEEECCC-EEEeCE
Confidence 111222221 23 33778999999997777787777766 899999
Q ss_pred EEEccCCCch
Q 020277 236 LVGADGIWSK 245 (328)
Q Consensus 236 VV~AdG~~S~ 245 (328)
||.|.|....
T Consensus 236 Vv~A~G~~p~ 245 (452)
T 3oc4_A 236 GIFALNLHPQ 245 (452)
T ss_dssp EEECSCCBCC
T ss_pred EEECcCCCCC
Confidence 9999998753
No 206
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.18 E-value=1.1e-05 Score=77.27 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=30.4
Q ss_pred CCeEEEECCChHHHHHHHHHHH-CCCeEEEEcc
Q 020277 77 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 108 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~-~g~~v~~~~~ 108 (328)
.+||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5799999999999999999999 9999999994
No 207
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.18 E-value=1.6e-05 Score=76.95 Aligned_cols=100 Identities=19% Similarity=0.211 Sum_probs=74.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++++|||||..|+..|..+++.|.+|||+++... .+ . ++..+.
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~-L~--~------------------~D~ei~-------------- 266 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV-LR--G------------------FDQQCA-------------- 266 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS-ST--T------------------SCHHHH--------------
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc-cc--c------------------cchhHH--------------
Confidence 457899999999999999999999999999987532 10 0 000110
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
..+.+.|.+ .+. .++.+..+..++..++.+.+.+.++.++.+|.
T Consensus 267 ----------------------------------~~l~~~l~~-~gi-~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~ 310 (542)
T 4b1b_A 267 ----------------------------------VKVKLYMEE-QGV-MFKNGILPKKLTKMDDKILVEFSDKTSELYDT 310 (542)
T ss_dssp ----------------------------------HHHHHHHHH-TTC-EEEETCCEEEEEEETTEEEEEETTSCEEEESE
T ss_pred ----------------------------------HHHHHHHHh-hcc-eeecceEEEEEEecCCeEEEEEcCCCeEEEEE
Confidence 112223322 233 47789999999999999999999999999999
Q ss_pred EEEccCCCchh
Q 020277 236 LVGADGIWSKV 246 (328)
Q Consensus 236 VV~AdG~~S~v 246 (328)
|+.|.|...-+
T Consensus 311 vLvAvGR~Pnt 321 (542)
T 4b1b_A 311 VLYAIGRKGDI 321 (542)
T ss_dssp EEECSCEEESC
T ss_pred EEEcccccCCc
Confidence 99999987644
No 208
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.17 E-value=2.7e-05 Score=74.01 Aligned_cols=101 Identities=27% Similarity=0.241 Sum_probs=73.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~--------------- 223 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA---------VDE-----------QV--------------- 223 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT---------SCH-----------HH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc---------cCH-----------HH---------------
Confidence 4579999999999999999999999999999997642110 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecC---cEEe
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYA 232 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g---~~i~ 232 (328)
...+.+.|.+ .+ ..++.+++|++++.+++++.+++.++ .+++
T Consensus 224 ---------------------------------~~~l~~~l~~-~G-v~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~ 268 (476)
T 3lad_A 224 ---------------------------------AKEAQKILTK-QG-LKILLGARVTGTEVKNKQVTVKFVDAEGEKSQA 268 (476)
T ss_dssp ---------------------------------HHHHHHHHHH-TT-EEEEETCEEEEEEECSSCEEEEEESSSEEEEEE
T ss_pred ---------------------------------HHHHHHHHHh-CC-CEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEE
Confidence 0112222222 23 33777999999998888888888765 6899
Q ss_pred cCEEEEccCCCchh
Q 020277 233 GDLLVGADGIWSKV 246 (328)
Q Consensus 233 ad~VV~AdG~~S~v 246 (328)
+|.||.|.|.....
T Consensus 269 ~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 269 FDKLIVAVGRRPVT 282 (476)
T ss_dssp ESEEEECSCEEECC
T ss_pred CCEEEEeeCCcccC
Confidence 99999999987544
No 209
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.16 E-value=1.7e-05 Score=75.96 Aligned_cols=100 Identities=20% Similarity=0.219 Sum_probs=71.1
Q ss_pred CCeEEEECCChHHHHHHHHHHH----CCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKR----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~----~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~ 152 (328)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.... . .+.+ .+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~--~------~l~~-----------~~------------ 228 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG--K------ILPE-----------YL------------ 228 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT--T------TSCH-----------HH------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc--c------cCCH-----------HH------------
Confidence 6899999999999999999987 4789999987642110 0 0000 00
Q ss_pred ccccccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEe
Q 020277 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (328)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 232 (328)
...+.+.| +..+. .++.+++|++++.+++.+.+++.+|+++.
T Consensus 229 ------------------------------------~~~~~~~l-~~~GV-~v~~~~~V~~i~~~~~~~~v~l~dG~~i~ 270 (493)
T 1m6i_A 229 ------------------------------------SNWTMEKV-RREGV-KVMPNAIVQSVGVSSGKLLIKLKDGRKVE 270 (493)
T ss_dssp ------------------------------------HHHHHHHH-HTTTC-EEECSCCEEEEEEETTEEEEEETTSCEEE
T ss_pred ------------------------------------HHHHHHHH-HhcCC-EEEeCCEEEEEEecCCeEEEEECCCCEEE
Confidence 01112222 22243 47889999999887777888899999999
Q ss_pred cCEEEEccCCCch
Q 020277 233 GDLLVGADGIWSK 245 (328)
Q Consensus 233 ad~VV~AdG~~S~ 245 (328)
+|.||.|.|..+.
T Consensus 271 aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 271 TDHIVAAVGLEPN 283 (493)
T ss_dssp ESEEEECCCEEEC
T ss_pred CCEEEECCCCCcc
Confidence 9999999998764
No 210
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.14 E-value=2.3e-06 Score=88.98 Aligned_cols=36 Identities=25% Similarity=0.433 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
..+++|+||||||+||++|..|+++|+ +|+|||+.+
T Consensus 185 ~~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 185 AYSAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred cCCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 357899999999999999999999999 799999975
No 211
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.11 E-value=1.4e-06 Score=83.39 Aligned_cols=52 Identities=19% Similarity=0.273 Sum_probs=41.8
Q ss_pred HHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCc----EEecCEEEEccCCC
Q 020277 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ----CYAGDLLVGADGIW 243 (328)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~----~i~ad~VV~AdG~~ 243 (328)
.|.+.|.+.++. .++++++|++|+.++++|+|++.+|+ +++||.||.|.+.+
T Consensus 242 ~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 455555555554 58899999999998888999888775 48999999999975
No 212
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.11 E-value=2.5e-05 Score=74.60 Aligned_cols=99 Identities=23% Similarity=0.307 Sum_probs=68.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++|+.+...... ++..+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------~~~~~--------------- 238 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY-------------------YDRDL--------------- 238 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-------------------SCHHH---------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH-------------------HHHHH---------------
Confidence 46899999999999999999999999999999886421100 00000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEE-EEEecCcEEecC
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGD 234 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~ad 234 (328)
...+.+.|.+ .+. .++++++|++++. ++++. +.+ +|+++++|
T Consensus 239 ---------------------------------~~~l~~~l~~-~GV-~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D 281 (490)
T 2bc0_A 239 ---------------------------------TDLMAKNMEE-HGI-QLAFGETVKEVAG-NGKVEKIIT-DKNEYDVD 281 (490)
T ss_dssp ---------------------------------HHHHHHHHHT-TTC-EEEETCCEEEEEC-SSSCCEEEE-SSCEEECS
T ss_pred ---------------------------------HHHHHHHHHh-CCe-EEEeCCEEEEEEc-CCcEEEEEE-CCcEEECC
Confidence 0112222222 233 3777999999986 34343 444 77899999
Q ss_pred EEEEccCCCch
Q 020277 235 LLVGADGIWSK 245 (328)
Q Consensus 235 ~VV~AdG~~S~ 245 (328)
.||.|.|....
T Consensus 282 ~Vi~a~G~~p~ 292 (490)
T 2bc0_A 282 MVILAVGFRPN 292 (490)
T ss_dssp EEEECCCEEEC
T ss_pred EEEECCCCCcC
Confidence 99999997654
No 213
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.10 E-value=2.6e-05 Score=74.32 Aligned_cols=99 Identities=24% Similarity=0.246 Sum_probs=67.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++|+.+.... . ++..+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~------------------~~~~~--------------- 229 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT--I------------------YDGDM--------------- 229 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS--S------------------SCHHH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh--c------------------CCHHH---------------
Confidence 468999999999999999999999999999998753210 0 00000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
...+.+.|. ..+. .++++++|++++.+ +++.....++.++++|.
T Consensus 230 ---------------------------------~~~l~~~l~-~~Gv-~i~~~~~v~~i~~~-~~v~~v~~~~~~i~~D~ 273 (480)
T 3cgb_A 230 ---------------------------------AEYIYKEAD-KHHI-EILTNENVKAFKGN-ERVEAVETDKGTYKADL 273 (480)
T ss_dssp ---------------------------------HHHHHHHHH-HTTC-EEECSCCEEEEEES-SBEEEEEETTEEEECSE
T ss_pred ---------------------------------HHHHHHHHH-HcCc-EEEcCCEEEEEEcC-CcEEEEEECCCEEEcCE
Confidence 011222222 2243 37778999999875 44432333566899999
Q ss_pred EEEccCCCch
Q 020277 236 LVGADGIWSK 245 (328)
Q Consensus 236 VV~AdG~~S~ 245 (328)
||.|.|..+.
T Consensus 274 vi~a~G~~p~ 283 (480)
T 3cgb_A 274 VLVSVGVKPN 283 (480)
T ss_dssp EEECSCEEES
T ss_pred EEECcCCCcC
Confidence 9999998764
No 214
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.09 E-value=3.1e-06 Score=78.03 Aligned_cols=36 Identities=36% Similarity=0.581 Sum_probs=33.7
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
....++|+|||||++||++|+.|+++|++|+|+|+.
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 346789999999999999999999999999999998
No 215
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.09 E-value=2.9e-05 Score=73.57 Aligned_cols=100 Identities=21% Similarity=0.261 Sum_probs=72.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++++|||+|+.|+..|..|++.|.+|+++++.+..... +.+ .+
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~---------~~~-----------~~--------------- 213 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR---------FDQ-----------DM--------------- 213 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------SCH-----------HH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---------cCH-----------HH---------------
Confidence 4679999999999999999999999999999988642110 000 10
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCe-EEEE-EecCcEEec
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVV-LENGQCYAG 233 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~-~~~g~~i~a 233 (328)
...+.+.|. ..+. .++.+++|++++.++++ +.++ +.+|+ +.+
T Consensus 214 ---------------------------------~~~l~~~l~-~~Gv-~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~a 257 (463)
T 4dna_A 214 ---------------------------------RRGLHAAME-EKGI-RILCEDIIQSVSADADGRRVATTMKHGE-IVA 257 (463)
T ss_dssp ---------------------------------HHHHHHHHH-HTTC-EEECSCCEEEEEECTTSCEEEEESSSCE-EEE
T ss_pred ---------------------------------HHHHHHHHH-HCCC-EEECCCEEEEEEEcCCCEEEEEEcCCCe-EEe
Confidence 011222222 2243 37789999999887555 6777 78887 999
Q ss_pred CEEEEccCCCchh
Q 020277 234 DLLVGADGIWSKV 246 (328)
Q Consensus 234 d~VV~AdG~~S~v 246 (328)
|.||.|.|.++..
T Consensus 258 D~Vv~a~G~~p~~ 270 (463)
T 4dna_A 258 DQVMLALGRMPNT 270 (463)
T ss_dssp SEEEECSCEEESC
T ss_pred CEEEEeeCcccCC
Confidence 9999999987644
No 216
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.06 E-value=4.6e-06 Score=79.54 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=45.2
Q ss_pred HHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecC---cEEecCEEEEccCCC
Q 020277 190 MTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAGDLLVGADGIW 243 (328)
Q Consensus 190 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g---~~i~ad~VV~AdG~~ 243 (328)
..|.+.|.+.++...++++++|++|+.++++|+|++.+| ++++||.||.|...+
T Consensus 239 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 356777777776445899999999999999999988887 689999999999875
No 217
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.05 E-value=4.1e-05 Score=69.77 Aligned_cols=109 Identities=16% Similarity=0.196 Sum_probs=70.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|..|+.+|..|++.|.+|+++++.+.... +. .+.. .
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~------------~~-------~d~~---------------~ 210 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND------------PD-------ADPS---------------V 210 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------------------------CT---------------T
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC------------CC-------CCCC---------------c
Confidence 357999999999999999999999999999998753110 00 0000 0
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEe-cC
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA-GD 234 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~-ad 234 (328)
..+ .-.+..+.+.|.+ .+...++.+++|.+++.+++.+.+++.+|+++. +|
T Consensus 211 ------------------------~~~---~~~~~~l~~~l~~-~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d 262 (369)
T 3d1c_A 211 ------------------------RLS---PYTRQRLGNVIKQ-GARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPH 262 (369)
T ss_dssp ------------------------SCC---HHHHHHHHHHHHT-TCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESS
T ss_pred ------------------------cCC---HHHHHHHHHHHhh-CCcEEEecCcEEEEEEecCCceEEEecCCeEeccCC
Confidence 000 0001222333322 222447789999999877778888889998775 59
Q ss_pred EEEEccCCCchh
Q 020277 235 LLVGADGIWSKV 246 (328)
Q Consensus 235 ~VV~AdG~~S~v 246 (328)
.||.|.|.....
T Consensus 263 ~vi~a~G~~~~~ 274 (369)
T 3d1c_A 263 EPILATGFDATK 274 (369)
T ss_dssp CCEECCCBCGGG
T ss_pred ceEEeeccCCcc
Confidence 999999987543
No 218
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.04 E-value=1.4e-05 Score=82.64 Aligned_cols=35 Identities=31% Similarity=0.524 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~ 162 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 57899999999999999999999999999999754
No 219
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.04 E-value=2.8e-05 Score=69.85 Aligned_cols=95 Identities=18% Similarity=0.123 Sum_probs=68.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+....
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~----------------------------------------- 210 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA----------------------------------------- 210 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-----------------------------------------
Confidence 468999999999999999999999999999998753100
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEE-EEEec-----Cc
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVS-VVLEN-----GQ 229 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~-v~~~~-----g~ 229 (328)
...+.+.|.+..+ ..++.+++|++++.+++++. +++.+ +.
T Consensus 211 ---------------------------------~~~~~~~l~~~~g-v~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~ 256 (338)
T 3itj_A 211 ---------------------------------STIMQKRAEKNEK-IEILYNTVALEAKGDGKLLNALRIKNTKKNEET 256 (338)
T ss_dssp ---------------------------------CHHHHHHHHHCTT-EEEECSEEEEEEEESSSSEEEEEEEETTTTEEE
T ss_pred ---------------------------------CHHHHHHHHhcCC-eEEeecceeEEEEcccCcEEEEEEEECCCCceE
Confidence 0011222222112 33777899999988776544 66665 45
Q ss_pred EEecCEEEEccCCCch
Q 020277 230 CYAGDLLVGADGIWSK 245 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~ 245 (328)
++.+|.||.|.|....
T Consensus 257 ~i~~D~vi~a~G~~p~ 272 (338)
T 3itj_A 257 DLPVSGLFYAIGHTPA 272 (338)
T ss_dssp EEECSEEEECSCEEEC
T ss_pred EEEeCEEEEEeCCCCC
Confidence 8999999999998653
No 220
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.03 E-value=5.5e-05 Score=67.52 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 46799999999999999999999999999999875
No 221
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.02 E-value=4.1e-05 Score=74.82 Aligned_cols=98 Identities=21% Similarity=0.310 Sum_probs=69.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|..|+.+|..|++.|.+|+++++.+..... +.+ .+
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~~-----------~~--------------- 230 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP---------IDY-----------EM--------------- 230 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------SCH-----------HH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc---------CCH-----------HH---------------
Confidence 3579999999999999999999999999999987532110 000 10
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
...+.+.|. ..+. .++.+++|++++.++++ +++.+|+++.+|.
T Consensus 231 ---------------------------------~~~l~~~l~-~~GV-~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~ 273 (588)
T 3ics_A 231 ---------------------------------AAYVHEHMK-NHDV-ELVFEDGVDALEENGAV--VRLKSGSVIQTDM 273 (588)
T ss_dssp ---------------------------------HHHHHHHHH-HTTC-EEECSCCEEEEEGGGTE--EEETTSCEEECSE
T ss_pred ---------------------------------HHHHHHHHH-HcCC-EEEECCeEEEEecCCCE--EEECCCCEEEcCE
Confidence 011222222 2233 37778999999876554 5668888999999
Q ss_pred EEEccCCCch
Q 020277 236 LVGADGIWSK 245 (328)
Q Consensus 236 VV~AdG~~S~ 245 (328)
||.|.|..+.
T Consensus 274 Vi~a~G~~p~ 283 (588)
T 3ics_A 274 LILAIGVQPE 283 (588)
T ss_dssp EEECSCEEEC
T ss_pred EEEccCCCCC
Confidence 9999998754
No 222
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.02 E-value=4.7e-06 Score=78.89 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=33.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+|||+|++||++|+.|++.|++|+|+|++..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~ 45 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDH 45 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 457999999999999999999999999999999865
No 223
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.01 E-value=7e-05 Score=66.57 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 35899999999999999999999999999998875
No 224
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.01 E-value=2.9e-05 Score=73.21 Aligned_cols=99 Identities=21% Similarity=0.309 Sum_probs=69.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+...... +.+ .+
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------~~~-----------~~--------------- 192 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS--------FDK-----------EV--------------- 192 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--------SCH-----------HH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh--------cCH-----------HH---------------
Confidence 45799999999999999999999999999999986421100 000 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~ 235 (328)
...+.+.|.+. ..++.+++|.+++.++ ++...+.+++++++|.
T Consensus 193 ---------------------------------~~~l~~~l~~~---v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~ 235 (449)
T 3kd9_A 193 ---------------------------------TDILEEKLKKH---VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAEL 235 (449)
T ss_dssp ---------------------------------HHHHHHHHTTT---SEEEESCCEEEEECSS-SCCEEEETTEEEECSE
T ss_pred ---------------------------------HHHHHHHHHhC---cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCE
Confidence 01122222221 3477789999997654 4544567888999999
Q ss_pred EEEccCCCch
Q 020277 236 LVGADGIWSK 245 (328)
Q Consensus 236 VV~AdG~~S~ 245 (328)
||.|.|....
T Consensus 236 Vv~a~G~~p~ 245 (449)
T 3kd9_A 236 VILATGIKPN 245 (449)
T ss_dssp EEECSCEEEC
T ss_pred EEEeeCCccC
Confidence 9999998743
No 225
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.01 E-value=6.1e-05 Score=71.61 Aligned_cols=101 Identities=20% Similarity=0.122 Sum_probs=70.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++|+|||+|..|+.+|..|++.|.+|+++++.+...+. ++..+
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~d~~~--------------- 230 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS--------------------FDSMI--------------- 230 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHH---------------
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc--------------------cCHHH---------------
Confidence 3579999999999999999999999999999987542110 00010
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCe--EEEEEec------
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLEN------ 227 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~------ 227 (328)
...+.+.|.+ .+. .++.+++|++++.++++ +.+.+.+
T Consensus 231 ---------------------------------~~~~~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~ 275 (478)
T 3dk9_A 231 ---------------------------------STNCTEELEN-AGV-EVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPV 275 (478)
T ss_dssp ---------------------------------HHHHHHHHHH-TTC-EEETTEEEEEEEECSSSEEEEEEECCTTSCCE
T ss_pred ---------------------------------HHHHHHHHHH-CCC-EEEeCCEEEEEEEcCCCcEEEEEEccCCCCcc
Confidence 0112222322 233 37789999999876554 6677765
Q ss_pred -CcEEecCEEEEccCCCchh
Q 020277 228 -GQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 228 -g~~i~ad~VV~AdG~~S~v 246 (328)
|.++.+|.||.|.|.....
T Consensus 276 ~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 276 MTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp EEEEEEESEEEECSCEEESC
T ss_pred cceEEEcCEEEEeeccccCC
Confidence 2579999999999976543
No 226
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.96 E-value=4.6e-06 Score=78.65 Aligned_cols=52 Identities=13% Similarity=-0.004 Sum_probs=41.9
Q ss_pred HHHHHHHHhcCCceEecCCeEEEEEEeCCe-EEEEEecCcEEecCEEEEccCCCc
Q 020277 191 TLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLVGADGIWS 244 (328)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~ad~VV~AdG~~S 244 (328)
.|.+.|.+.++. .++++++|++|+.++++ ++|++ +|++++||.||.|.+.+.
T Consensus 216 ~l~~~l~~~lg~-~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~ 268 (453)
T 2yg5_A 216 QVSIRMAEALGD-DVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNL 268 (453)
T ss_dssp HHHHHHHHHHGG-GEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGG
T ss_pred HHHHHHHHhcCC-cEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHH
Confidence 455556666664 48899999999998888 88765 778999999999999873
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=3.8e-05 Score=70.55 Aligned_cols=35 Identities=23% Similarity=0.390 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 47999999999999999999999999999998854
No 228
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.92 E-value=7.5e-05 Score=67.13 Aligned_cols=98 Identities=13% Similarity=0.104 Sum_probs=68.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|..|+.+|..|++.|.+|+++++.+... ..+ ...
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------~~~-----------~~~-------------- 194 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------AHE-----------ASV-------------- 194 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------SCH-----------HHH--------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------ccH-----------HHH--------------
Confidence 46899999999999999999999999999999875310 000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEe---cC--cE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NG--QC 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~---~g--~~ 230 (328)
..+.+.|.+ .+ ..++.+++|.+++.++....+++. +| .+
T Consensus 195 ----------------------------------~~l~~~l~~-~g-v~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 238 (335)
T 2zbw_A 195 ----------------------------------KELMKAHEE-GR-LEVLTPYELRRVEGDERVRWAVVFHNQTQEELA 238 (335)
T ss_dssp ----------------------------------HHHHHHHHT-TS-SEEETTEEEEEEEESSSEEEEEEEETTTCCEEE
T ss_pred ----------------------------------HHHHhcccc-CC-eEEecCCcceeEccCCCeeEEEEEECCCCceEE
Confidence 111222211 23 347788899999875443345555 66 58
Q ss_pred EecCEEEEccCCCch
Q 020277 231 YAGDLLVGADGIWSK 245 (328)
Q Consensus 231 i~ad~VV~AdG~~S~ 245 (328)
+.+|.||.|.|..+.
T Consensus 239 i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 239 LEVDAVLILAGYITK 253 (335)
T ss_dssp EECSEEEECCCEEEE
T ss_pred EecCEEEEeecCCCC
Confidence 999999999998764
No 229
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.92 E-value=8e-06 Score=77.95 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
..+||+||||||+|+++|+.|+++|++|+|+|+.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 3579999999999999999999999999999994
No 230
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.89 E-value=8.7e-05 Score=66.02 Aligned_cols=95 Identities=20% Similarity=0.093 Sum_probs=68.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.... .+ .
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~-----------~~-----------~---------------- 194 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-----------QP-----------I---------------- 194 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-----------CH-----------H----------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-----------CH-----------H----------------
Confidence 357999999999999999999999999999998753110 00 0
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEec---Cc--E
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---GQ--C 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~---g~--~ 230 (328)
+.+.+.+..+ ..++.+++|++++.++....+++.+ |+ +
T Consensus 195 ------------------------------------~~~~~~~~~g-v~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 237 (323)
T 3f8d_A 195 ------------------------------------YVETVKKKPN-VEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKE 237 (323)
T ss_dssp ------------------------------------HHHHHHTCTT-EEEECSEEEEEEEESSSEEEEEEEETTTCCEEE
T ss_pred ------------------------------------HHHHHHhCCC-cEEEeCCEEEEEeccCceeEEEEEECCCCceEE
Confidence 0111112112 3377788899998775555566765 65 7
Q ss_pred EecCEEEEccCCCch
Q 020277 231 YAGDLLVGADGIWSK 245 (328)
Q Consensus 231 i~ad~VV~AdG~~S~ 245 (328)
+.+|.||.|.|....
T Consensus 238 ~~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 238 LNVNGVFIEIGFDPP 252 (323)
T ss_dssp EECSEEEECCCEECC
T ss_pred EEcCEEEEEECCCCC
Confidence 999999999998764
No 231
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.89 E-value=9.2e-05 Score=66.33 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 35799999999999999999999999999999875
No 232
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.89 E-value=9.5e-06 Score=77.58 Aligned_cols=57 Identities=12% Similarity=0.127 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcCCceEecCCeEEEEEEeCCe------EEEEEe--cC---cEEecCEEEEccCCCchh
Q 020277 190 MTLQQILAKAVGDEIILNESNVIDFKDHGDK------VSVVLE--NG---QCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 190 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~------v~v~~~--~g---~~i~ad~VV~AdG~~S~v 246 (328)
..|.+.|.+.++...|+++++|++|+.++++ +.|++. +| ++++||.||.|...+...
T Consensus 243 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 243 QTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp HHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHH
T ss_pred HHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHH
Confidence 3455666666664458999999999988777 777765 45 578999999999876543
No 233
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.89 E-value=9.6e-06 Score=75.47 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~-g~~v~~~~~~~~ 111 (328)
..++|+|||||++||++|+.|+++ |++|+|+|+.+.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~ 42 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPH 42 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 367999999999999999999999 999999999853
No 234
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.88 E-value=1.2e-05 Score=74.77 Aligned_cols=37 Identities=27% Similarity=0.461 Sum_probs=33.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...++|+|||||++||++|+.|+++|++|+|+|+.+.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~ 63 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPH 63 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCC
Confidence 3568999999999999999999999999999999754
No 235
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.88 E-value=9.2e-05 Score=69.64 Aligned_cols=94 Identities=15% Similarity=0.202 Sum_probs=66.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhccccccccc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~~ 156 (328)
.++|+|||||+.|+.+|..+++.|.+|+|+|+.+...... +..+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~--------------------d~~~---------------- 190 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM--------------------DADM---------------- 190 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS--------------------CGGG----------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc--------------------cchh----------------
Confidence 5689999999999999999999999999999886421100 0000
Q ss_pred ccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEE
Q 020277 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (328)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~V 236 (328)
...+.+.|.+ .+.. ++.+++|++++ ++ .+++++|+++++|.|
T Consensus 191 --------------------------------~~~~~~~l~~-~gV~-i~~~~~v~~~~--~~--~v~~~~g~~~~~D~v 232 (437)
T 4eqs_A 191 --------------------------------NQPILDELDK-REIP-YRLNEEINAIN--GN--EITFKSGKVEHYDMI 232 (437)
T ss_dssp --------------------------------GHHHHHHHHH-TTCC-EEESCCEEEEE--TT--EEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHhhc-cceE-EEeccEEEEec--CC--eeeecCCeEEeeeeE
Confidence 1122333322 2433 67788888874 33 366789999999999
Q ss_pred EEccCCCc
Q 020277 237 VGADGIWS 244 (328)
Q Consensus 237 V~AdG~~S 244 (328)
|.|.|...
T Consensus 233 l~a~G~~P 240 (437)
T 4eqs_A 233 IEGVGTHP 240 (437)
T ss_dssp EECCCEEE
T ss_pred EEEeceec
Confidence 99999764
No 236
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.88 E-value=0.00015 Score=69.04 Aligned_cols=99 Identities=23% Similarity=0.246 Sum_probs=68.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
.+++++|||+|+.|+.+|..|++.|.+|+++++... .. . +.+ .+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~-l~--~-------~d~-----------~~~-------------- 230 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV-LR--G-------FDQ-----------QMA-------------- 230 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS-ST--T-------SCH-----------HHH--------------
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC-Cc--c-------cCH-----------HHH--------------
Confidence 457899999999999999999999999999987421 10 0 000 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCC-eEEEEEecCc-----
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQ----- 229 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~----- 229 (328)
..+.+.|.+ .+.. ++.+++|++++.+++ .+.+++.++.
T Consensus 231 ----------------------------------~~l~~~l~~-~Gv~-i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~ 274 (483)
T 3dgh_A 231 ----------------------------------ELVAASMEE-RGIP-FLRKTVPLSVEKQDDGKLLVKYKNVETGEES 274 (483)
T ss_dssp ----------------------------------HHHHHHHHH-TTCC-EEETEEEEEEEECTTSCEEEEEEETTTCCEE
T ss_pred ----------------------------------HHHHHHHHh-CCCE-EEeCCEEEEEEEcCCCcEEEEEecCCCCcee
Confidence 111222222 2434 777999999987554 4777777654
Q ss_pred EEecCEEEEccCCCch
Q 020277 230 CYAGDLLVGADGIWSK 245 (328)
Q Consensus 230 ~i~ad~VV~AdG~~S~ 245 (328)
++.+|.||.|.|....
T Consensus 275 ~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 275 EDVYDTVLWAIGRKGL 290 (483)
T ss_dssp EEEESEEEECSCEEEC
T ss_pred EEEcCEEEECcccccC
Confidence 7999999999998654
No 237
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.87 E-value=9e-05 Score=65.84 Aligned_cols=36 Identities=28% Similarity=0.260 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 467999999999999999999999999999998753
No 238
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.85 E-value=1.5e-05 Score=76.87 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=34.0
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
....++|+|||||++|+++|..|++.|++|+|+|+..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3456899999999999999999999999999999985
No 239
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.84 E-value=1.1e-05 Score=76.54 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
..+||+||||||+|+++|..|+++|++|+|+|+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3579999999999999999999999999999994
No 240
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.82 E-value=1.6e-05 Score=73.59 Aligned_cols=35 Identities=26% Similarity=0.490 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 37 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 37 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 46999999999999999999999999999999754
No 241
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.82 E-value=0.00016 Score=64.10 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=67.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+... . .+ .+
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~---~--------~~-----------~~--------------- 188 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR---A--------AP-----------ST--------------- 188 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB---S--------CH-----------HH---------------
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC---C--------CH-----------HH---------------
Confidence 35799999999999999999999999999999875310 0 00 00
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeEE-EEEe--cCc--E
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVS-VVLE--NGQ--C 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~-v~~~--~g~--~ 230 (328)
.+.+.+..+ ..++++++|.+++.+++++. +++. +|+ +
T Consensus 189 -------------------------------------~~~~~~~~g-v~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~ 230 (315)
T 3r9u_A 189 -------------------------------------VEKVKKNEK-IELITSASVDEVYGDKMGVAGVKVKLKDGSIRD 230 (315)
T ss_dssp -------------------------------------HHHHHHCTT-EEEECSCEEEEEEEETTEEEEEEEECTTSCEEE
T ss_pred -------------------------------------HHHHHhcCC-eEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEE
Confidence 111112222 33777899999988775543 5554 775 7
Q ss_pred EecCEEEEccCCCch
Q 020277 231 YAGDLLVGADGIWSK 245 (328)
Q Consensus 231 i~ad~VV~AdG~~S~ 245 (328)
+.+|.||.|.|....
T Consensus 231 ~~~D~vv~a~G~~p~ 245 (315)
T 3r9u_A 231 LNVPGIFTFVGLNVR 245 (315)
T ss_dssp ECCSCEEECSCEEEC
T ss_pred eecCeEEEEEcCCCC
Confidence 999999999997643
No 242
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.81 E-value=0.0002 Score=69.24 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=34.4
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+++|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4578999999999999999999999999999999875
No 243
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.81 E-value=9.9e-05 Score=67.20 Aligned_cols=98 Identities=18% Similarity=0.224 Sum_probs=68.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCccccCCCccccceeechhHHHHHHhcCchHHHHHHHhcccccccc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~~~~~g~~~~~~~l~~~~~~~l~~l~~g~~~~l~~~~~~~~~~~ 155 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.... .+ .+.
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------~~-----------~~~-------------- 205 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG-----------HG-----------KTA-------------- 205 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS-----------CS-----------HHH--------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC-----------CH-----------HHH--------------
Confidence 467999999999999999999999999999998753100 00 000
Q ss_pred cccccCCCCceEEeecCCchhhhcCCCeEEEecHHHHHHHHHHhcCCceEecCCeEEEEEEeCCeE-EEEEe--cC--cE
Q 020277 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLE--NG--QC 230 (328)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v-~v~~~--~g--~~ 230 (328)
..+.+.+.+ .+ ..++++++|++++.+++++ .+.+. +| .+
T Consensus 206 ----------------------------------~~l~~~~~~-~g-v~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~ 249 (360)
T 3ab1_A 206 ----------------------------------HEVERARAN-GT-IDVYLETEVASIEESNGVLTRVHLRSSDGSKWT 249 (360)
T ss_dssp ----------------------------------HSSHHHHHH-TS-EEEESSEEEEEEEEETTEEEEEEEEETTCCEEE
T ss_pred ----------------------------------HHHHHHhhc-Cc-eEEEcCcCHHHhccCCCceEEEEEEecCCCeEE
Confidence 001111111 22 3477889999998876654 34443 77 57
Q ss_pred EecCEEEEccCCCch
Q 020277 231 YAGDLLVGADGIWSK 245 (328)
Q Consensus 231 i~ad~VV~AdG~~S~ 245 (328)
+.+|.||.|.|....
T Consensus 250 i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 250 VEADRLLILIGFKSN 264 (360)
T ss_dssp EECSEEEECCCBCCS
T ss_pred EeCCEEEECCCCCCC
Confidence 999999999997654
No 244
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.80 E-value=0.00014 Score=65.35 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 468999999999999999999999999999998753
No 245
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.79 E-value=1.5e-05 Score=73.37 Aligned_cols=34 Identities=32% Similarity=0.397 Sum_probs=31.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++|+|||||++||++|+.|+++|++|+|+|+.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 35 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNH 35 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 5899999999999999999999999999999753
No 246
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.78 E-value=1.5e-05 Score=75.86 Aligned_cols=35 Identities=37% Similarity=0.509 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45899999999999999999999999999999974
No 247
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.75 E-value=0.00031 Score=66.90 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 3568999999999999999999999999999876
No 248
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.75 E-value=2.6e-05 Score=77.30 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=34.6
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+.++|+|||+|++||++|+.|+++|++|+|+|+...
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 35678999999999999999999999999999999754
No 249
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.75 E-value=2.4e-05 Score=74.70 Aligned_cols=58 Identities=16% Similarity=0.217 Sum_probs=44.5
Q ss_pred cHHHHHHHHHHhcCCceEecCC--eEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchhh
Q 020277 188 SRMTLQQILAKAVGDEIILNES--NVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKVR 247 (328)
Q Consensus 188 ~r~~l~~~L~~~~~~~~i~~~~--~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~vr 247 (328)
.-..|.+.|.+.++...+++++ +|++|+.++++|+ +.+|++++||.||.|...+...+
T Consensus 214 G~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ 273 (484)
T 4dsg_A 214 GTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLR 273 (484)
T ss_dssp CTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHH
T ss_pred CHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHH
Confidence 3466777788877654588884 6999998887664 57888999999999987766543
No 250
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.74 E-value=2.2e-05 Score=74.45 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+.+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 35799999999999999999999999999999973
No 251
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.72 E-value=3.5e-05 Score=78.22 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=34.5
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
....++|+|||+|++||++|+.|+++|++|+|||+...
T Consensus 275 ~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 275 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 34578999999999999999999999999999998754
No 252
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.72 E-value=1.9e-05 Score=74.56 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 5799999999999999999999999999999973
No 253
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.72 E-value=2.4e-05 Score=74.95 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4799999999999999999999999999999984
No 254
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.72 E-value=0.00028 Score=62.98 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+|||+|+.|+..|..|++.|.+|+++++.+
T Consensus 154 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 154 KGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp BTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 35799999999999999999999999999999864
No 255
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.70 E-value=2.3e-05 Score=74.39 Aligned_cols=34 Identities=32% Similarity=0.502 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.++|+||||||+|+++|..|++.|++|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999975
No 256
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.67 E-value=0.00013 Score=65.83 Aligned_cols=35 Identities=23% Similarity=0.202 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+|||+|+.|+..|..|++.|.+|+++++.+
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 46899999999999999999999999999998874
No 257
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.65 E-value=3e-05 Score=73.43 Aligned_cols=34 Identities=32% Similarity=0.569 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
..++|+||||||+|+++|..|++.|++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 3579999999999999999999999999999994
No 258
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.63 E-value=4.8e-05 Score=71.49 Aligned_cols=54 Identities=20% Similarity=0.144 Sum_probs=42.4
Q ss_pred HHHHHHHHhc---CCceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCch
Q 020277 191 TLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 191 ~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
.|.+.|.+.+ |.. ++++++|++|..+++++++...+|++++||.||.|.|.++.
T Consensus 235 ~l~~~l~~~~~~~G~~-i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGT-YMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCC-CBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCE-EECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 4555555433 444 78899999999888888755578889999999999999975
No 259
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.59 E-value=0.00018 Score=69.64 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=34.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+++|+|||+|..|+.+|..|++.+.+|+++++.+.
T Consensus 183 ~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 183 FTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred cCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 3578999999999999999999999999999999875
No 260
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.59 E-value=4.9e-05 Score=74.76 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+||+|||||++|+++|..|++.|++|+|+|+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~ 80 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI 80 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCC
Confidence 357999999999999999999999999999999864
No 261
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.58 E-value=0.00034 Score=62.44 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.
T Consensus 153 ~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 153 AGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp BTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 368999999999999999999999999999988753
No 262
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.57 E-value=4.4e-05 Score=72.30 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-C------CCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR-K------GFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~-~------g~~v~~~~~~~~ 111 (328)
++++|+||||||+|+.+|..|++ . |++|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 35799999999999999999999 7 999999999854
No 263
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.56 E-value=4.6e-05 Score=72.89 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHH-CCCeEEEEcc
Q 020277 77 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 108 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~-~g~~v~~~~~ 108 (328)
.+||+||||||+|+++|..|++ .|++|+|+|+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 264
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.54 E-value=6.3e-05 Score=71.35 Aligned_cols=36 Identities=14% Similarity=0.363 Sum_probs=33.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+||+|||+|++|+++|+.|++.|++|+++|+.+.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~ 54 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPY 54 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 468999999999999999999999999999999853
No 265
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.51 E-value=7.3e-05 Score=70.83 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC--CeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g--~~v~~~~~~~~ 111 (328)
.+++|+||||||+|+.+|..|+++| ++|+|||+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 4579999999999999999999998 99999999864
No 266
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.51 E-value=0.00041 Score=66.73 Aligned_cols=35 Identities=29% Similarity=0.265 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+++|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 46899999999999999999999999999999875
No 267
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.50 E-value=7.5e-05 Score=70.81 Aligned_cols=55 Identities=18% Similarity=0.135 Sum_probs=44.8
Q ss_pred HHHHHHHHhcC----------CceEecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCch
Q 020277 191 TLQQILAKAVG----------DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSK 245 (328)
Q Consensus 191 ~l~~~L~~~~~----------~~~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~ 245 (328)
.|.+.|.+.+. ...++++++|++|+.++++++|++.+|++++||.||.|.+.+..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHh
Confidence 55666666642 23589999999999988899999999989999999999997643
No 268
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.48 E-value=0.0014 Score=64.01 Aligned_cols=34 Identities=24% Similarity=0.100 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
.+++|+|||||..|+.+|..|++.|.+|+++++.
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 3568999999999999999999999999999987
No 269
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.48 E-value=0.00026 Score=66.58 Aligned_cols=35 Identities=11% Similarity=-0.043 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCe-EEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~-v~~~~~~~ 110 (328)
..++|+|||+|..|+-.|..|++.|.+ |+++++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 468999999999999999999999999 99998874
No 270
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.46 E-value=0.0014 Score=62.83 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
.+++|+|||+|..|+.+|..|++.|.+|+++++.
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 3467999999999999999999999999999975
No 271
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.43 E-value=0.00055 Score=60.00 Aligned_cols=34 Identities=21% Similarity=0.182 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+|||+|+.|+.+|..|++.| +|+++++..
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 4689999999999999999999999 999998764
No 272
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.41 E-value=0.00012 Score=70.92 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=33.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|++|||+|++|+.+|..|++.|++|+|+|++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 568999999999999999999999999999999863
No 273
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.38 E-value=0.00043 Score=66.27 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=28.2
Q ss_pred CeEEEECCChHHHHHHHHHHHC--------------CCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRK--------------GFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~--------------g~~v~~~~~~~~ 111 (328)
.+++|||||+.|+.+|..|+.. ..+|+|+|..+.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~ 265 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 265 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc
Confidence 5799999999999999988753 357888888764
No 274
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.32 E-value=0.0026 Score=61.52 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=34.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+++|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 189 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 189 FTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 3578999999999999999999999999999999875
No 275
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.31 E-value=0.0004 Score=69.19 Aligned_cols=36 Identities=22% Similarity=0.202 Sum_probs=32.7
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAG--GGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G--~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+||| +|..|+.+|..|++.|.+|+++++.+.
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 467899999 999999999999999999999998753
No 276
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.29 E-value=0.0014 Score=58.01 Aligned_cols=36 Identities=22% Similarity=0.416 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+++|+|||+|..|+.+|..|++.|.+|+|+++...
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 468999999999999999999999999999998653
No 277
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.26 E-value=0.0047 Score=58.94 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=32.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
.++|+|+|||+|-.|.-.+..|+++ +.+|+++-|++.
T Consensus 244 ~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 244 SKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 4678999999999999999999875 679999988754
No 278
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.18 E-value=0.0015 Score=61.87 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+++|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 46899999999999999999999999999999875
No 279
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.13 E-value=0.0052 Score=58.03 Aligned_cols=36 Identities=14% Similarity=0.048 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHH--------------------HCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAK--------------------RKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~--------------------~~g~-~v~~~~~~~~ 111 (328)
..++|+|||+|..|+.+|..|+ +.|. +|+|+++...
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 4689999999999999999999 5787 7999998864
No 280
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.12 E-value=0.00028 Score=67.78 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-CCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~-~g~~v~~~~~~~ 110 (328)
..+|++|||+|++|+.+|..|++ .|++|.|+|++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 46899999999999999999998 679999999985
No 281
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.10 E-value=0.00028 Score=63.52 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+|||+|..|+.+|..|++.| +|+++.+..
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 4689999999999999999999998 799998874
No 282
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.03 E-value=0.00068 Score=67.93 Aligned_cols=35 Identities=14% Similarity=0.055 Sum_probs=32.5
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAG--GGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G--~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+||| ||..|+.+|..|++.|.+|+++++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 467999999 99999999999999999999999875
No 283
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.00 E-value=0.00051 Score=66.85 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-CeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g-~~v~~~~~~~~ 111 (328)
..+|++|||||.||+.+|..|++.| .+|.|+|++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999998 79999999865
No 284
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.00 E-value=0.0023 Score=66.07 Aligned_cols=35 Identities=23% Similarity=0.108 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|||+|+.|+.+|..|++.|.+|+|+|+.+.
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSS 318 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc
Confidence 57899999999999999999999999999998753
No 285
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.00 E-value=0.0042 Score=61.57 Aligned_cols=30 Identities=17% Similarity=0.101 Sum_probs=26.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEE
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLV 105 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~ 105 (328)
..++|+|||||..|+.+|..|++.|.+|++
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 468999999999999999999999987764
No 286
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.99 E-value=0.00034 Score=67.54 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|++|||+|.+|+.+|..|++ |.+|.|+|++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 45899999999999999999999 999999999854
No 287
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.92 E-value=0.0095 Score=61.92 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
+++|+|||||..|+.+|..+++.|. +|+++++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 5699999999999999999999997 899999876
No 288
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.91 E-value=0.00069 Score=64.86 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++++|||+|++|+.+|..|++.|++|.|+|++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35799999999999999999999999999999975
No 289
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.89 E-value=0.0063 Score=57.38 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--------------------CC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK--------------------GF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~--------------------g~-~v~~~~~~~~ 111 (328)
..++|+|||+|..|+.+|..|++. |. +|+|+++...
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 468999999999999999999974 54 8999998864
No 290
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.87 E-value=0.0013 Score=52.26 Aligned_cols=37 Identities=30% Similarity=0.349 Sum_probs=33.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
....+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3467899999999999999999999999999998754
No 291
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.86 E-value=0.0011 Score=63.62 Aligned_cols=36 Identities=31% Similarity=0.477 Sum_probs=33.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
...++++|||+|++|+.+|..|++.|.+|.|+|++.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 346899999999999999999999999999999975
No 292
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.85 E-value=0.0017 Score=50.66 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=33.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
....+|+|+|+|..|...|..|.+.|++|+++|+++.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4467899999999999999999999999999999854
No 293
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.80 E-value=0.00086 Score=65.30 Aligned_cols=35 Identities=31% Similarity=0.556 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~-g~~v~~~~~~~ 110 (328)
..+|++|||||.||+.+|..|++. +++|.|+|+++
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 468999999999999999999975 89999999987
No 294
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.76 E-value=0.0014 Score=58.28 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+++|+|||||+.|+.+|..|++.|.+|+|+|+.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 57999999999999999999999999999998754
No 295
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.62 E-value=0.0014 Score=63.84 Aligned_cols=36 Identities=36% Similarity=0.573 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-CCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~-~g~~v~~~~~~~~ 111 (328)
..+|++|||+|++|+.+|..|++ .|.+|.|+|++..
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 46899999999999999999999 7999999999854
No 296
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.57 E-value=0.0016 Score=62.87 Aligned_cols=36 Identities=22% Similarity=0.390 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~-g~~v~~~~~~~~ 111 (328)
..+|++|||+|++|+.+|..|++. |.+|.|+|++..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 468999999999999999999998 899999999854
No 297
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.55 E-value=0.00098 Score=64.68 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHH-CCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~-~g~~v~~~~~~~~ 111 (328)
.+|++|||||.+|+.+|..|++ .|++|.|+|+++.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 4799999999999999999998 6999999999753
No 298
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.52 E-value=0.0032 Score=48.56 Aligned_cols=34 Identities=26% Similarity=0.476 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.++|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.39 E-value=0.0038 Score=46.52 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-CeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g-~~v~~~~~~~~ 111 (328)
.++|+|+|+|..|..++..|.+.| ++|+++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA 40 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH
Confidence 468999999999999999999999 89999998753
No 300
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.38 E-value=0.0043 Score=49.08 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+++|+|+|+|..|...|..|.+.|++|+++|+.+
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 35689999999999999999999999999999974
No 301
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.35 E-value=0.0042 Score=48.31 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|+|+|..|...|..|.++|++|+++|+++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999998753
No 302
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.32 E-value=0.0031 Score=58.08 Aligned_cols=36 Identities=25% Similarity=0.200 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCcc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~~ 112 (328)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 578999999999999999999999999999998653
No 303
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.09 E-value=0.0055 Score=57.72 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+.++|.|||.|.+|+++|..|+++|++|+++|...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 56899999999999999999999999999999865
No 304
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.07 E-value=0.0039 Score=58.51 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++++|+|||.|.+|+++|..|+++|++|+++|....
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 457899999999999999999999999999998754
No 305
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.04 E-value=0.0068 Score=49.40 Aligned_cols=36 Identities=19% Similarity=0.089 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~-g~~v~~~~~~~~ 111 (328)
.+.+|+|+|+|..|...|..|.+. |++|+++|+++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 456899999999999999999999 999999998753
No 306
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.99 E-value=0.0064 Score=46.97 Aligned_cols=35 Identities=26% Similarity=0.244 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|+|+|..|...|..|.+.|++|+++|+.+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~ 40 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEE 40 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999998743
No 307
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.79 E-value=0.0095 Score=53.29 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...+|+|||+|..|...|..++..|++|+++|..+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 356899999999999999999999999999998754
No 308
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.67 E-value=0.012 Score=49.91 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=33.0
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
.-++++|+|||||..|...|..|.+.|.+|+|+++.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 346789999999999999999999999999999875
No 309
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.63 E-value=0.015 Score=51.52 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
-++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36899999999999999999999999999998753
No 310
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.61 E-value=0.015 Score=53.71 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+.+|+|+|+|++|+.+|..|...|.+|+++|+.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 467999999999999999999999999999999864
No 311
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.61 E-value=0.015 Score=51.04 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
-++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998854
No 312
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.58 E-value=0.0091 Score=52.20 Aligned_cols=35 Identities=31% Similarity=0.458 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
++++|+|||||..|...|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 57899999999999999999999999999998753
No 313
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=95.53 E-value=0.0014 Score=61.04 Aligned_cols=35 Identities=11% Similarity=0.105 Sum_probs=31.5
Q ss_pred CCCccccccCCCCCCccCCCCCcccccCccccccc
Q 020277 10 VNLSTTVFSRTHFPVPVYKHSCIDFSRYDHCINYK 44 (328)
Q Consensus 10 ~~~~~~~~a~~~~~~k~~~g~~~~i~~c~~c~~~~ 44 (328)
+.+...+++||+||+|+++|+.++|++|+.|+++.
T Consensus 343 VaiGR~~IanPdlv~ki~~G~~~~I~~ci~~~~~~ 377 (419)
T 3l5a_A 343 VGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLE 377 (419)
T ss_dssp EEESTHHHHCTTHHHHHHTTCGGGCCCCCCGGGTT
T ss_pred HHHHHHHHHCcHHHHHHHcCCcccceecCCHHHHH
Confidence 45678899999999999999999999999999843
No 314
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.48 E-value=0.068 Score=49.19 Aligned_cols=36 Identities=11% Similarity=0.259 Sum_probs=29.4
Q ss_pred EecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCc
Q 020277 205 ILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWS 244 (328)
Q Consensus 205 i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S 244 (328)
++.+++|++++. ++ +++++|+++++|.||.|.|...
T Consensus 235 ~~~~~~v~~i~~--~~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 235 LVHNFKIKEIRE--HE--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp EECSCCEEEECS--SE--EEETTSCEEECSEEEEECCEEC
T ss_pred EEcCCceEEECC--Ce--EEECCCCEEeeeEEEECCCCCc
Confidence 777889998854 33 6678999999999999999754
No 315
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.43 E-value=0.014 Score=53.34 Aligned_cols=36 Identities=31% Similarity=0.351 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+.+|+|||+|.+|+.+|..|...|.+|+++|+.+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467999999999999999999999999999999864
No 316
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.40 E-value=0.022 Score=51.33 Aligned_cols=36 Identities=11% Similarity=0.345 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
+..+|+|||+|-.|...|..|+..|+ +|+++|....
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 44689999999999999999999998 9999998853
No 317
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.39 E-value=0.018 Score=51.46 Aligned_cols=33 Identities=30% Similarity=0.399 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+|+|||+|..|...|..|++.|++|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999874
No 318
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.34 E-value=0.017 Score=51.71 Aligned_cols=35 Identities=23% Similarity=0.460 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999854
No 319
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.31 E-value=0.019 Score=56.20 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=33.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+||+|||+|..|...|..|++.|.+|.++|+++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~ 42 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSY 42 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCc
Confidence 469999999999999999999999999999999864
No 320
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.28 E-value=0.02 Score=51.35 Aligned_cols=35 Identities=31% Similarity=0.254 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHH-HHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLV-FALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~-~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|.|||.|.+|++ +|..|+++|++|+++|+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 478999999999996 88999999999999998753
No 321
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.24 E-value=0.025 Score=47.30 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|.|||+|-.|.+.|..|++.|++|+++++.+.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 356899999999999999999999999999998754
No 322
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.11 E-value=0.026 Score=49.25 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=31.0
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+|.|||+|..|...|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998754
No 323
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.10 E-value=0.023 Score=52.55 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+.+|+|+|+|.+|+.+|..+...|.+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 468999999999999999999999999999998754
No 324
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.06 E-value=0.026 Score=51.84 Aligned_cols=36 Identities=33% Similarity=0.420 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+++|+|+|+|.+|+.+|..+...|.+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999999999999999999999999998754
No 325
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.05 E-value=0.019 Score=48.21 Aligned_cols=33 Identities=18% Similarity=0.443 Sum_probs=31.0
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+|+|+|+|..|...|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998754
No 326
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.04 E-value=0.011 Score=46.15 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|||+|..|...|..|.+.|++|+++++...
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 67999999999999999999999999999998743
No 327
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.98 E-value=0.025 Score=51.50 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
...+|.|||+|-.|.+.|..|++.|++|+++++.+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 35689999999999999999999999999999874
No 328
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.97 E-value=0.027 Score=49.75 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|.|||+|..|...|..|+ .|++|+++|+++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 4689999999999999999999 9999999998753
No 329
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.97 E-value=0.033 Score=52.31 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.-++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 347899999999999999999999999999999854
No 330
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.96 E-value=0.032 Score=49.64 Aligned_cols=36 Identities=25% Similarity=0.481 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999999864
No 331
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.93 E-value=0.021 Score=50.85 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
++|+|||+|-.|.+.|..|++.|++|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999874
No 332
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.89 E-value=0.027 Score=50.62 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
..+|+|||+|-.|...|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 358999999999999999999999999999985
No 333
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.89 E-value=0.074 Score=46.74 Aligned_cols=35 Identities=6% Similarity=0.036 Sum_probs=27.9
Q ss_pred CCCeEEEECCCh-HHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGI-GGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~-~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+.++++|||||. +++.+|..+.+.|.+|+++++..
T Consensus 145 ~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 145 KDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred cCCceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 346788888885 56889998888999999997764
No 334
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.79 E-value=0.033 Score=49.56 Aligned_cols=34 Identities=26% Similarity=0.462 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
..+|+|||+|-.|...|..|++.|+ +|+++|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999999 999999874
No 335
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.79 E-value=0.032 Score=49.26 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999864
No 336
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.77 E-value=0.034 Score=52.33 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=33.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
..+++|+|||||..|+-+|..+.+.|. +|+++++.+.
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 457899999999999999999999998 5999998764
No 337
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.76 E-value=0.034 Score=50.62 Aligned_cols=36 Identities=28% Similarity=0.446 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+++|+|+|+|.+|+.++..|...|.+|+++++.+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~ 201 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVE 201 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 348999999999999999999999999999998743
No 338
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.75 E-value=0.036 Score=47.42 Aligned_cols=37 Identities=30% Similarity=0.303 Sum_probs=32.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...++|.|||+|-.|...|..|++.|++|+++++.+.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 4568999999999999999999999999999998754
No 339
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.75 E-value=0.032 Score=52.88 Aligned_cols=35 Identities=23% Similarity=0.434 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|.|||.|..|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 46899999999999999999999999999998743
No 340
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.72 E-value=0.2 Score=46.51 Aligned_cols=37 Identities=11% Similarity=0.058 Sum_probs=26.4
Q ss_pred eEecCCeEEEEEEeCCeEEEEE--ec-----CcEEecCEEEEccCC
Q 020277 204 IILNESNVIDFKDHGDKVSVVL--EN-----GQCYAGDLLVGADGI 242 (328)
Q Consensus 204 ~i~~~~~v~~i~~~~~~v~v~~--~~-----g~~i~ad~VV~AdG~ 242 (328)
.++.+++|++++ ++++++.. .+ +.++.+|+||.|.|.
T Consensus 224 ~~~~~~~v~~v~--~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 224 EAYTNCKVTKVE--DNKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp EEECSEEEEEEE--TTEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred EEEcCCEEEEEE--CCeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 377789999885 44555443 22 567999999999884
No 341
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.71 E-value=0.037 Score=52.18 Aligned_cols=36 Identities=28% Similarity=0.270 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.-++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 346899999999999999999999999999998753
No 342
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.65 E-value=0.037 Score=48.50 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5899999999999999999999999999999854
No 343
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.58 E-value=0.04 Score=51.65 Aligned_cols=35 Identities=34% Similarity=0.464 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|.|||.|-.|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999865
No 344
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.55 E-value=0.041 Score=50.24 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+++|+|+|+|.+|+.+|..|+..|++|+++|+++.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~ 200 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHK 200 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 458999999999999999999999999999998753
No 345
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.55 E-value=0.042 Score=48.63 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+.++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 346899999999999999999999999999998753
No 346
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.54 E-value=0.047 Score=49.03 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
..+|+|||+|-.|...|..|+..|+ +|+++|....
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 3689999999999999999999999 9999999753
No 347
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.53 E-value=0.041 Score=49.67 Aligned_cols=33 Identities=36% Similarity=0.412 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+|+|||+|..|...|..|++.|++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999874
No 348
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.51 E-value=0.041 Score=52.04 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHC-CC-eEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRK-GF-EVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~-g~-~v~~~~~~~~ 111 (328)
..+|.|||+|-.|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35899999999999999999999 99 9999999865
No 349
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.47 E-value=0.04 Score=51.79 Aligned_cols=34 Identities=35% Similarity=0.366 Sum_probs=31.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+|.|||+|-.|+..|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5899999999999999999999999999998753
No 350
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.47 E-value=0.1 Score=48.38 Aligned_cols=36 Identities=14% Similarity=0.058 Sum_probs=27.1
Q ss_pred eEecCCeEEEEEEeCCeEEEEEec----CcEEecCEEEEccCCC
Q 020277 204 IILNESNVIDFKDHGDKVSVVLEN----GQCYAGDLLVGADGIW 243 (328)
Q Consensus 204 ~i~~~~~v~~i~~~~~~v~v~~~~----g~~i~ad~VV~AdG~~ 243 (328)
.++++++|++++. ++++ +++ ++++.+|.||.|.|..
T Consensus 216 ~i~~~~~v~~v~~--~~v~--~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 216 DWIANVAVKAIEP--DKVI--YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp EEECSCEEEEECS--SEEE--EECTTSCEEEEECSEEEEECEEE
T ss_pred EEEeCCEEEEEeC--CeEE--EEecCCCceEEeeeEEEECCCCc
Confidence 3778999999853 4444 344 6789999999998865
No 351
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.45 E-value=0.045 Score=48.83 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
..+|+|||+|-.|...|..|++.|+ +|+++|....
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 4689999999999999999999999 9999998753
No 352
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.45 E-value=0.045 Score=50.16 Aligned_cols=37 Identities=24% Similarity=0.342 Sum_probs=33.4
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
-.+++|+|+|+|.+|+.+|..+...|.+|+++|+...
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~ 202 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINID 202 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 3578999999999999999999999999999998753
No 353
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.40 E-value=0.044 Score=45.91 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|.|||+|-.|...|..|++.|++|++++++..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPK 62 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998743
No 354
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.33 E-value=0.054 Score=47.13 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+.++|+|+|+|-+|.++|..|++.|.+|+++++..
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 46799999999999999999999999999998774
No 355
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.32 E-value=0.03 Score=49.37 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+|+|||+|-.|.+.|..|++.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999884
No 356
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.28 E-value=0.035 Score=48.96 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999864
No 357
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.23 E-value=0.05 Score=48.58 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 456899999999999999999999999999998854
No 358
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.18 E-value=0.053 Score=48.36 Aligned_cols=33 Identities=21% Similarity=0.460 Sum_probs=29.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
...+|+|||+|-.|.+.|..|++.|++|+++ +.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4578999999999999999999999999999 55
No 359
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.17 E-value=0.11 Score=49.19 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=33.1
Q ss_pred EecCCeEEEEEEeCCeEEEEEecCcEEecCEEEEccCCCchh
Q 020277 205 ILNESNVIDFKDHGDKVSVVLENGQCYAGDLLVGADGIWSKV 246 (328)
Q Consensus 205 i~~~~~v~~i~~~~~~v~v~~~~g~~i~ad~VV~AdG~~S~v 246 (328)
++++++|++++.++....+.+.+|+++++|.||.|.|.++..
T Consensus 274 v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~ 315 (493)
T 1y56_A 274 YVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDI 315 (493)
T ss_dssp EEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECC
T ss_pred EEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCc
Confidence 667888888876554445667888899999999999988653
No 360
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.16 E-value=0.057 Score=50.41 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...+|.|||.|-.||..|..++++|++|+.+|-++.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 446899999999999999999999999999998753
No 361
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.16 E-value=0.049 Score=46.84 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
..++|+|||+|-.|..+|..|++.|. +++|+|+..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 35789999999999999999999998 899999985
No 362
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.13 E-value=0.067 Score=47.73 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~ 109 (328)
+.++|.|||+|..|...|..|+..|+ +|+++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45789999999999999999999999 99999987
No 363
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.06 E-value=0.06 Score=48.29 Aligned_cols=35 Identities=31% Similarity=0.531 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
...+|.|||+|-.|...|..|++.|++|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999999864
No 364
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.01 E-value=0.065 Score=48.54 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
|+|+|+|||..|..+|+.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899999999999999999999999999998754
No 365
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.00 E-value=0.074 Score=46.27 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|+|+|-+|.++|..|++.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 78999999999999999999999999999988753
No 366
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.00 E-value=0.038 Score=48.41 Aligned_cols=34 Identities=29% Similarity=0.352 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999999864
No 367
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.99 E-value=0.11 Score=48.81 Aligned_cols=37 Identities=30% Similarity=0.539 Sum_probs=34.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+.++|+|||||++||++|+.|+++|++|+|+|+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 45 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTR 45 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCC
Confidence 4568999999999999999999999999999999854
No 368
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.99 E-value=0.06 Score=47.75 Aligned_cols=32 Identities=31% Similarity=0.391 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+|+|||+|-.|.+.|..|+ .|++|++++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999999874
No 369
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.91 E-value=0.077 Score=47.52 Aligned_cols=36 Identities=25% Similarity=0.370 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
+..+|+|||+|..|.+.|..|+..|+ +++++|....
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 45689999999999999999999999 9999998753
No 370
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.90 E-value=0.069 Score=44.98 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=32.4
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++++|+|.|| |..|..++..|.++|++|+++.+...
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 45789999998 99999999999999999999998754
No 371
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.89 E-value=0.072 Score=46.88 Aligned_cols=36 Identities=22% Similarity=0.140 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
-.+++|.|||.|.+|..+|..|...|.+|+++++..
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 357899999999999999999999999999999874
No 372
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.89 E-value=0.073 Score=47.02 Aligned_cols=36 Identities=22% Similarity=0.167 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
-.+++|.|||+|.+|..+|..|...|++|+++++..
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 457899999999999999999999999999999874
No 373
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.89 E-value=0.076 Score=47.12 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 374
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.88 E-value=0.059 Score=50.70 Aligned_cols=35 Identities=20% Similarity=0.122 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
++++|+|||+|..|...|..|.+.|.+|+|+++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 57899999999999999999999999999999853
No 375
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.86 E-value=0.053 Score=50.66 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=30.7
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+|.|||+|-.|+..|..|++.|++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 699999999999999999999999999998743
No 376
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.85 E-value=0.069 Score=47.36 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
.+|+|||+|-.|...|..|+..|+ +|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999999 999999874
No 377
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.85 E-value=0.031 Score=52.68 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|+|+|+|-.|...|..|...|++|+++|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46899999999999999999999999999999854
No 378
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.83 E-value=0.081 Score=46.85 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999998754
No 379
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.82 E-value=0.084 Score=47.22 Aligned_cols=35 Identities=29% Similarity=0.473 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
..+|+|||+|-.|...|..|+..|+ +|+++|....
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 3589999999999999999999999 9999998753
No 380
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.77 E-value=0.074 Score=47.01 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
..++|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 46799999999999999999999998 999999874
No 381
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=93.75 E-value=0.12 Score=48.54 Aligned_cols=36 Identities=25% Similarity=0.478 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
+.++|+|||||++||++|+.|++.|+ +|+|+|+...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~ 39 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDH 39 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCC
Confidence 35799999999999999999999999 8999999754
No 382
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.73 E-value=0.063 Score=47.33 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 5899999999999999999999999999998753
No 383
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.70 E-value=0.076 Score=48.26 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+.++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 457899999999999999999999999999998754
No 384
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.69 E-value=0.08 Score=45.98 Aligned_cols=35 Identities=31% Similarity=0.374 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|.|+|..|...+..|.++|++|+++.+...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 46899999999999999999999999999998753
No 385
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.67 E-value=0.064 Score=47.88 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=29.0
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEcc
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~ 108 (328)
+|.|||+|-.|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 386
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.63 E-value=0.081 Score=49.88 Aligned_cols=35 Identities=37% Similarity=0.252 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.++.|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 57899999999999999999999999999998874
No 387
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.56 E-value=0.067 Score=50.67 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999998854
No 388
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=93.56 E-value=0.064 Score=46.73 Aligned_cols=35 Identities=11% Similarity=0.186 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+.++|+|+|+|-+|.+.|..|++.|.+|+|+.|..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46799999999999999999999999999998874
No 389
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.54 E-value=0.062 Score=48.29 Aligned_cols=37 Identities=19% Similarity=0.145 Sum_probs=31.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHC-CCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~-g~~v~~~~~~~~ 111 (328)
..+.+|+|+|+|+.|+.++..+++. |.+|+.++.++.
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~ 199 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQD 199 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHH
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHH
Confidence 3567999999999999999888875 789999987643
No 390
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.54 E-value=0.13 Score=47.09 Aligned_cols=37 Identities=32% Similarity=0.462 Sum_probs=33.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+++|+|+|+|..|..+|..+.+.|++|++++..+.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 4678999999999999999999999999999997653
No 391
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.53 E-value=0.058 Score=47.67 Aligned_cols=35 Identities=26% Similarity=0.328 Sum_probs=28.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|.+||-|..|...|..|.+.||+|++||+.+.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999999999999998764
No 392
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.51 E-value=0.073 Score=49.39 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+.+|+|+|.|..|...|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999999854
No 393
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.48 E-value=0.11 Score=46.23 Aligned_cols=35 Identities=26% Similarity=0.487 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
..++|.|||.|..|.+.|..|.+.|+ +|+++|+++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34789999999999999999999999 999999875
No 394
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.44 E-value=0.056 Score=47.78 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=29.4
Q ss_pred CeEEEECCChHHHHHHHHHHHC-----C-CeEEEEcc
Q 020277 78 LRILVAGGGIGGLVFALAAKRK-----G-FEVLVFEK 108 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~-----g-~~v~~~~~ 108 (328)
.+|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999988
No 395
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.44 E-value=0.076 Score=49.19 Aligned_cols=36 Identities=31% Similarity=0.166 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
-.+++|+|+|.|.+|..+|..|...|.+|+++|+++
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357899999999999999999999999999999874
No 396
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.42 E-value=0.068 Score=50.60 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=32.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++++|.|||.|..|...|..|+++|++|+++++.+.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 3567899999999999999999999999999998753
No 397
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.42 E-value=0.081 Score=49.27 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|.|||.|-.|+..|..|++ |++|+++|+.+.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3589999999999999999998 999999998854
No 398
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.38 E-value=0.085 Score=48.24 Aligned_cols=37 Identities=30% Similarity=0.372 Sum_probs=33.4
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
.-...+|+|+|+|.+|+.+|..|...|. +|+++|+..
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 3456899999999999999999999999 999999974
No 399
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.37 E-value=0.084 Score=45.76 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|+|.|+|..|...+..|.++|++|+++.+...
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 36899999999999999999999999999998753
No 400
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.34 E-value=0.079 Score=47.08 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~ 109 (328)
...+|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999999 99999996
No 401
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.27 E-value=0.12 Score=42.19 Aligned_cols=34 Identities=35% Similarity=0.507 Sum_probs=31.5
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++|+|.|| |..|..++..|.++|++|+++.+++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 68999998 99999999999999999999998754
No 402
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.27 E-value=0.091 Score=46.84 Aligned_cols=34 Identities=12% Similarity=0.081 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-CeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g-~~v~~~~~~~ 110 (328)
.++|.|||.|-.|...|..|++.| ++|+++++.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 368999999999999999999999 9999999985
No 403
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.23 E-value=0.1 Score=49.52 Aligned_cols=37 Identities=32% Similarity=0.209 Sum_probs=33.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+++|+|||.|..|..+|..|...|.+|+++|+.+.
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3578999999999999999999999999999998754
No 404
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.15 E-value=0.096 Score=47.79 Aligned_cols=35 Identities=17% Similarity=0.333 Sum_probs=32.4
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~ 109 (328)
-.+.+|+|+|+|-+|..+|..|...|. +|+++|+.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 356899999999999999999999998 89999997
No 405
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.14 E-value=0.13 Score=46.00 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
+..+|+|||+|..|.+.|..|+..|+ ++.++|..+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 34689999999999999999999998 9999998753
No 406
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.13 E-value=0.054 Score=45.53 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEE-EccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~-~~~~~~ 111 (328)
..+|.|||+|-.|...|..|++.|++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 36899999999999999999999999999 887753
No 407
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.12 E-value=0.11 Score=46.06 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.0
Q ss_pred eEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 79 RILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
+|+|||+|-.|...|..|++. |++|+++|+...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 799999999999999999985 789999999753
No 408
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.10 E-value=0.08 Score=48.91 Aligned_cols=32 Identities=31% Similarity=0.330 Sum_probs=29.6
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+|.|||+|-.|+..|..|++ |++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~ 33 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPS 33 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHH
Confidence 69999999999999999999 999999998743
No 409
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.09 E-value=0.11 Score=46.51 Aligned_cols=35 Identities=23% Similarity=0.456 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
...+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 45689999999999999999999998 899999753
No 410
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.07 E-value=0.11 Score=43.02 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=29.8
Q ss_pred eEEEEC-CChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 79 RILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 79 ~v~i~G-~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+|+|+| +|-.|...|..|++.|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999998864
No 411
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.06 E-value=0.093 Score=45.73 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++|+|||+|-+|.+.|..|.+.|++|+++++..
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 46799999999999999999999999999999874
No 412
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.03 E-value=0.11 Score=45.05 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
++|.|||+|..|...|..|++.|+ +|+++++.+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999999 899998874
No 413
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.99 E-value=0.12 Score=44.94 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998864
No 414
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.98 E-value=0.1 Score=52.05 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
-++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 46799999999999999999999999999998853
No 415
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.92 E-value=0.15 Score=47.41 Aligned_cols=36 Identities=28% Similarity=0.411 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+|||||++||++|+.|+++|++|+|+|+...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~ 39 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDR 39 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 457999999999999999999999999999999754
No 416
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.90 E-value=0.049 Score=46.07 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+|+|+|..|...|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 45689999999999999999999999 999998754
No 417
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.89 E-value=0.1 Score=45.96 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=31.7
Q ss_pred CCeEEEEC-CChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAG-GGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G-~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|.||| .|-.|.+.|..|++.|++|+++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 35799999 999999999999999999999998753
No 418
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.88 E-value=0.065 Score=48.64 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.3
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+|.|||+|-.|...|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 419
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.87 E-value=0.14 Score=45.70 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~ 109 (328)
++++++|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 57899999999999999999999998 89999887
No 420
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=92.84 E-value=0.13 Score=46.76 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=32.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
-.+++|+|+|.|-.|..+|..|.+.|.+|+++|+.
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 36789999999999999999999999999999865
No 421
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.81 E-value=0.14 Score=45.44 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
.+|+|||+|-.|...|..|+..|+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 999999865
No 422
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.77 E-value=0.11 Score=46.28 Aligned_cols=39 Identities=28% Similarity=0.267 Sum_probs=30.9
Q ss_pred CCCCCCeEEEECC-ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 73 SENKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 73 ~~~~~~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...+.++|+|.|| |..|..++..|.++|++|+++++...
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3456789999998 99999999999999999999998753
No 423
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.77 E-value=0.11 Score=44.50 Aligned_cols=32 Identities=16% Similarity=0.357 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHHCC-CeEEEEccCC
Q 020277 79 RILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g-~~v~~~~~~~ 110 (328)
+|.|||+|-.|...|..|++.| ++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999874
No 424
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.75 E-value=0.083 Score=46.19 Aligned_cols=36 Identities=22% Similarity=0.151 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
.+++|+|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 56899999999999999999999999 8999998754
No 425
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.74 E-value=0.12 Score=47.79 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
.+++|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 57899999999999999999999999 899999874
No 426
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.74 E-value=0.11 Score=44.55 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC----CeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g----~~v~~~~~~~~ 111 (328)
..+|.|||+|-.|...|..|++.| ++|+++++.+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 357999999999999999999999 79999998764
No 427
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.72 E-value=0.13 Score=45.91 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
++.+|+|||+|-.|..+|..|+..|+ ++.++|...
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 899999874
No 428
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.71 E-value=0.11 Score=49.23 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
..+|.|||.|..|+..|..|++. |++|+++|+++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 35899999999999999999998 799999998743
No 429
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.71 E-value=0.12 Score=45.38 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|.|||+|-.|...|..|++.|++|+++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA 38 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 430
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=92.70 E-value=0.15 Score=44.67 Aligned_cols=35 Identities=26% Similarity=0.252 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
++++|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 57899999999999999999999998 699998874
No 431
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.69 E-value=0.075 Score=47.92 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-------CeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g-------~~v~~~~~~~~ 111 (328)
.++|.|||+|-.|...|..|++.| ++|+++++.+.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999999 99999998754
No 432
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.68 E-value=0.11 Score=45.67 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
+..+|+|||+|-.|..+|..|++.|. +++|+|.+.-
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 56799999999999999999999997 8999998753
No 433
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.68 E-value=0.12 Score=48.88 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|.|||.|..|...|..|+++|++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45899999999999999999999999999999864
No 434
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.67 E-value=0.11 Score=46.23 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=30.1
Q ss_pred eEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
+|+|||+|-.|...|..|++.|+ +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 79999999999999999999999 999999874
No 435
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.64 E-value=0.044 Score=46.55 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
..+|.|||.|..|.+.|..|++.|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 468999999999999999999999999999885
No 436
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.59 E-value=0.15 Score=42.00 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=30.4
Q ss_pred eEEEECC-ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 79 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 6999996 99999999999999999999998754
No 437
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.56 E-value=0.22 Score=45.46 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...++|+|+|+|..|..++..+.+.|++|+++|..+.
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3568999999999999999999999999999998654
No 438
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.56 E-value=0.14 Score=46.08 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|.|||.|..|.+.|..|.+.|++|+++|+++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 42 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS 42 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46799999999999999999999999999998753
No 439
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.56 E-value=0.11 Score=45.41 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=30.7
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+|.|||+|..|...|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999999999999999999999999998754
No 440
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.54 E-value=0.13 Score=48.92 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...+|.|||.|..|...|..|+++|++|+++++.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999999864
No 441
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=92.53 E-value=0.17 Score=45.07 Aligned_cols=37 Identities=16% Similarity=0.102 Sum_probs=32.7
Q ss_pred CCCCCeEEEECCC-hHHHHHHHHHHHCCCeEEEEccCC
Q 020277 74 ENKKLRILVAGGG-IGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 74 ~~~~~~v~i~G~g-~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.-.+++|+|||+| .+|..+|..|...|.+|+++++..
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 3468899999999 679999999999999999998873
No 442
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=92.52 E-value=0.19 Score=46.63 Aligned_cols=38 Identities=29% Similarity=0.429 Sum_probs=33.6
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++++|+|+|+|..|...+..+.+.|++|.++|..+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 34678999999999999999999999999999987643
No 443
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.48 E-value=0.12 Score=45.21 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998743
No 444
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.47 E-value=0.19 Score=45.00 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
...+|+|||+|..|..+|..|+..|+ +++++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 45799999999999999999999998 899999763
No 445
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.46 E-value=0.15 Score=44.51 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC---eEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF---EVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~---~v~~~~~~~~ 111 (328)
.++|.|||+|-.|.+.|..|.+.|+ +|+++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 4689999999999999999999999 8999998854
No 446
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.45 E-value=0.15 Score=44.53 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=30.8
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+|.|||+ |-.|...|..|++.|++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999864
No 447
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.37 E-value=0.18 Score=43.92 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=32.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
..+++++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 357899999999999999999999996 899998864
No 448
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=92.35 E-value=0.12 Score=51.51 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.-++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 346899999999999999999999999999998854
No 449
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.35 E-value=0.11 Score=45.24 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++|.|||+|..|...|..|++ |++|+++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 369999999999999999999 999999998753
No 450
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=92.34 E-value=0.14 Score=47.71 Aligned_cols=36 Identities=28% Similarity=0.075 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
-.+++|+|||.|.+|..+|..|...|.+|+++|+.+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 367899999999999999999999999999999864
No 451
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.34 E-value=0.18 Score=45.22 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=34.1
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.-..++|.|||.|-.|...|..|+..|++|+++++...
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 34568999999999999999999999999999998754
No 452
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.34 E-value=0.15 Score=45.60 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
...+|+|||+|..|.++|..|+..|+ ++.++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 45789999999999999999999988 899999853
No 453
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.32 E-value=0.13 Score=45.52 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCC--CeEEEEccCC
Q 020277 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g--~~v~~~~~~~ 110 (328)
++|+|||+|-.|...|..|++.| ++|+++|+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7999999874
No 454
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.28 E-value=0.17 Score=44.18 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=31.8
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G-~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
++++++|+| +|.+|.++|..|++.|.+|+++++..
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 468999999 89999999999999999999998863
No 455
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.26 E-value=0.15 Score=43.79 Aligned_cols=36 Identities=22% Similarity=0.216 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
...+|+|||+|-.|..+|..|++.|. +++|+|...-
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 35799999999999999999999998 7999998753
No 456
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.25 E-value=0.14 Score=44.94 Aligned_cols=34 Identities=15% Similarity=0.354 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
+.++|+|+|+|-+|.+.|..|++.| +|+++++..
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 4678999999999999999999999 999998763
No 457
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.21 E-value=0.12 Score=49.18 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=31.3
Q ss_pred CCCCeEEEECCChHHHH-HHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLV-FALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~-~a~~l~~~g~~v~~~~~~~ 110 (328)
...++|.|||.|-+|++ +|..|.++|++|++.|...
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 34689999999999997 7999999999999999864
No 458
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=92.21 E-value=0.19 Score=46.73 Aligned_cols=36 Identities=17% Similarity=0.332 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..++|+|||+|++|+++|..|++.|++|+|+|++..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 40 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPY 40 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 457999999999999999999999999999999854
No 459
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.21 E-value=0.17 Score=44.21 Aligned_cols=35 Identities=17% Similarity=0.126 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
.+++|+|+|+|-+|.+.|..|++.|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 57899999999999999999999996 899998874
No 460
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.19 E-value=0.1 Score=47.62 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-------CeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g-------~~v~~~~~~~~ 111 (328)
++|.|||+|-.|.+.|..|++.| ++|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998753
No 461
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.16 E-value=0.18 Score=45.30 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~~ 111 (328)
+..+|+|||+|-.|..+|..|++.|. +++|+|...-
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 46899999999999999999999998 7999998753
No 462
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.15 E-value=0.16 Score=44.48 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
.+++++|+|+|-+|.++|..|.+.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 57899999999999999999999998 899998874
No 463
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.14 E-value=0.15 Score=45.07 Aligned_cols=34 Identities=29% Similarity=0.481 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
..+|+|||+|-.|...|..|+.+|+ ++.++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999999 999999875
No 464
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.10 E-value=0.19 Score=44.63 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
.+++++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 57899999999999999999999998 899998873
No 465
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.10 E-value=0.14 Score=48.35 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~--g~~v~~~~~~~~ 111 (328)
.+|.|||.|-.|+..|..|++. |++|+++|+++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5899999999999999999999 899999998753
No 466
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=92.08 E-value=0.18 Score=46.71 Aligned_cols=35 Identities=31% Similarity=0.158 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+++|+|||.|.+|..+|..|...|.+|+++|+.+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 57899999999999999999999999999999875
No 467
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.04 E-value=0.18 Score=45.37 Aligned_cols=35 Identities=26% Similarity=0.249 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.++|.|||+|-.|.+.|..|++.|++|+++++...
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 46899999999999999999999999999998753
No 468
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.03 E-value=0.15 Score=48.20 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=31.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998754
No 469
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.99 E-value=0.19 Score=41.57 Aligned_cols=33 Identities=36% Similarity=0.581 Sum_probs=30.3
Q ss_pred eEEEECC-ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 79 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 79 ~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+|+|.|| |..|...+..|.++|++|+++.|+..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ 35 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 6999998 99999999999999999999998743
No 470
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.99 E-value=0.24 Score=44.53 Aligned_cols=37 Identities=32% Similarity=0.256 Sum_probs=32.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+.+|+|+|+|..|+.++..+...|.+|+++++++.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 211 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEH 211 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSST
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4578999999999999999999889999999887653
No 471
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=91.93 E-value=0.2 Score=44.03 Aligned_cols=36 Identities=14% Similarity=0.004 Sum_probs=32.3
Q ss_pred CCCCeEEEECCC-hHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGG-IGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g-~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
-.+++|+|||+| ..|.-+|..|.+.|.+|+++.+..
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 199 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 199 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc
Confidence 468999999999 689999999999999999997654
No 472
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.92 E-value=0.22 Score=44.70 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=32.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
....+|+|||+|-.|...|+.|+.+|+ ++.++|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 456799999999999999999999998 899999763
No 473
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.87 E-value=0.19 Score=42.90 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC----eEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGF----EVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~----~v~~~~~~~~ 111 (328)
++|.|||+|-.|...|..|.+.|+ +|+++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 579999999999999999999998 9999998753
No 474
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=91.84 E-value=0.21 Score=43.37 Aligned_cols=36 Identities=8% Similarity=0.178 Sum_probs=31.9
Q ss_pred CCCCeEEEECCC-hHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGG-IGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g-~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
-.+++|+|||.| .+|..+|..|.+.|.+|+++.+..
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t 184 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT 184 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 368999999976 799999999999999999998753
No 475
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=91.82 E-value=0.15 Score=48.84 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=33.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+++|+|||+|..|+..|..|++.|.+|+++++.+.
T Consensus 184 ~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 184 FSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred cCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 3578999999999999999999999999999998764
No 476
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.81 E-value=0.22 Score=44.29 Aligned_cols=35 Identities=23% Similarity=0.523 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
+..+|+|||+|..|.+.|..|+..|. ++.++|...
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 45699999999999999999998886 899999874
No 477
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=91.78 E-value=0.2 Score=49.97 Aligned_cols=37 Identities=27% Similarity=0.269 Sum_probs=33.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..-++|.|||+|..|-..|..++..|++|+++|..+.
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 3457999999999999999999999999999998854
No 478
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.76 E-value=0.16 Score=47.27 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+.+..|||.|-.|+..|..|++.|++|+++|+++.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 356899999999999999999999999999999854
No 479
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.75 E-value=0.18 Score=44.50 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHHCCC--eEEEEccCC
Q 020277 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~--~v~~~~~~~ 110 (328)
+|+|||+|..|.+.|..|+..|+ +++++|..+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 79999999999999999999998 899999874
No 480
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.75 E-value=0.12 Score=47.50 Aligned_cols=30 Identities=33% Similarity=0.543 Sum_probs=28.1
Q ss_pred CeEEEECCChHHHHHHHHHHH-CCCeEEEEc
Q 020277 78 LRILVAGGGIGGLVFALAAKR-KGFEVLVFE 107 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~-~g~~v~~~~ 107 (328)
.+|+|||+|-.|...|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 499999999
No 481
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.74 E-value=0.25 Score=43.78 Aligned_cols=37 Identities=30% Similarity=0.449 Sum_probs=32.7
Q ss_pred CCCCCeEEEECC-ChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 74 ENKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 74 ~~~~~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
..++++|+|.|| |..|..++..|.++|++|+++++..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 345678999998 9999999999999999999999854
No 482
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.74 E-value=0.17 Score=45.13 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC----CeEEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g----~~v~~~~~~~ 110 (328)
..+|.|||+|-.|...|..|.+.| ++|+++++.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 457999999999999999999999 8999999875
No 483
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=91.72 E-value=0.2 Score=44.91 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=33.8
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
...+++|.|||.|-.|...|..|+..|++|+++++...
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 189 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQP 189 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 34578999999999999999999999999999998753
No 484
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=91.70 E-value=0.21 Score=43.96 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=31.7
Q ss_pred CCCCeEEEECCC-hHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGG-IGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g-~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
-.+++|+|||.| ++|..+|..|.+.|.+|+++.+.+
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 368999999965 699999999999999999998753
No 485
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.70 E-value=0.21 Score=43.74 Aligned_cols=36 Identities=39% Similarity=0.405 Sum_probs=32.2
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 76 KKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 76 ~~~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+.++|+|.|| |..|...+..|.++|++|+++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3578999999 99999999999999999999998754
No 486
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=91.63 E-value=0.22 Score=43.42 Aligned_cols=34 Identities=29% Similarity=0.561 Sum_probs=30.7
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+|+|.|| |..|..++..|.++||+|+++.|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 37999998 99999999999999999999988643
No 487
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.59 E-value=0.19 Score=47.42 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~ 39 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTS 39 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998743
No 488
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=91.57 E-value=0.23 Score=44.59 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=34.3
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.-.+++|.|||.|-.|...|..|+..|++|+++++...
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~ 180 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRK 180 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 34678999999999999999999999999999998764
No 489
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=91.54 E-value=0.24 Score=43.90 Aligned_cols=35 Identities=29% Similarity=0.365 Sum_probs=31.8
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 77 KLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 77 ~~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
+++|+|.|| |..|...+..|.++|++|+++++...
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 468999998 99999999999999999999998754
No 490
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.52 E-value=0.3 Score=43.22 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=31.6
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHCCCeEEEEccC
Q 020277 75 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKD 109 (328)
Q Consensus 75 ~~~~~v~i~G~-g~~g~~~a~~l~~~g~~v~~~~~~ 109 (328)
.++++|+|.|| |..|..++..|.++|++|+++.+.
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45678999998 999999999999999999998875
No 491
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.48 E-value=0.17 Score=43.56 Aligned_cols=34 Identities=32% Similarity=0.424 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCe-EEEEccCC
Q 020277 77 KLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDM 110 (328)
Q Consensus 77 ~~~v~i~G~g~~g~~~a~~l~~~g~~-v~~~~~~~ 110 (328)
..+|.|||+|-.|...|..|++.|++ |+++++.+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999998 89998864
No 492
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=91.44 E-value=0.21 Score=42.82 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.+|.|||+|-.|...|..|.+.|+.|+++++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~ 37 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLE 37 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHH
Confidence 5899999999999999999999999999998743
No 493
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.43 E-value=0.28 Score=41.99 Aligned_cols=36 Identities=25% Similarity=0.163 Sum_probs=32.0
Q ss_pred CCCCeEEEECC-C-hHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGG-G-IGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~-g-~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
.+++.|+|.|| | -.|..+|..|+++|++|+++++..
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 45788999999 7 599999999999999999998874
No 494
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=91.42 E-value=0.19 Score=43.21 Aligned_cols=30 Identities=23% Similarity=0.228 Sum_probs=28.2
Q ss_pred eEEEECCChHHHHHHHHHHHCCCeEEEEcc
Q 020277 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (328)
Q Consensus 79 ~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~ 108 (328)
+|.|||+|-.|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999876
No 495
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=91.39 E-value=0.23 Score=43.41 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=32.2
Q ss_pred CCCCeEEEECCC-hHHHHHHHHHHHCCCeEEEEccCC
Q 020277 75 NKKLRILVAGGG-IGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 75 ~~~~~v~i~G~g-~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
-.+++|+|||+| ..|.-+|..|.+.|.+|+++.+.+
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 467999999999 579999999999999999998654
No 496
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=91.38 E-value=0.2 Score=44.25 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=31.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 78 ~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
++|.+||-|..|...|..|.+.||+|+++++.+.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~ 37 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 5899999999999999999999999999999854
No 497
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.27 E-value=0.21 Score=45.24 Aligned_cols=35 Identities=20% Similarity=0.417 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-eEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~-~v~~~~~~~ 110 (328)
...+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 35799999999999999999999998 799999874
No 498
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.27 E-value=0.24 Score=42.70 Aligned_cols=34 Identities=35% Similarity=0.514 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCC
Q 020277 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (328)
Q Consensus 76 ~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~ 110 (328)
++ +|+|||+|-+|...|..|.+.|++|+++++..
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45 89999999999999999999999999999874
No 499
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.25 E-value=0.27 Score=44.44 Aligned_cols=37 Identities=22% Similarity=0.201 Sum_probs=32.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 75 ~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
..+.+|+|+|+|+.|+.++..+...|.+|+.+++++.
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~ 214 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSR 214 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4567999999999999999988889999999987653
No 500
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.19 E-value=0.24 Score=44.40 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=34.2
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCeEEEEccCCc
Q 020277 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (328)
Q Consensus 74 ~~~~~~v~i~G~g~~g~~~a~~l~~~g~~v~~~~~~~~ 111 (328)
.-.+++|.|||.|-.|...|..|+..|++|+++++...
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 34578999999999999999999999999999998764
Done!