BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020280
(328 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84K34|SIL10_ARATH E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana
GN=At5g37930 PE=2 SV=1
Length = 349
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 191/341 (56%), Gaps = 29/341 (8%)
Query: 1 MAKFSVGRLEEGEGPSGNSKRQRRAPHRHPQTNLRD-----------GEEEEEETHHQEE 49
MA+FSV ++GEGPS N+ Q R R P + + GEE+E+ET +Q
Sbjct: 1 MARFSVCGGDDGEGPS-NNNHQSRKRQRLPSIDENEEDAETSDAGSSGEEDEDETQNQGM 59
Query: 50 DDESVDNGGNGEKADLDLAGPSRN-GPF--------------SVTVTDPEVFDCPICYES 94
ES D G + +D ++ R G F SVT+ DP+V DCPIC E
Sbjct: 60 RPESEDRGSTSDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEP 119
Query: 95 LTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCK 154
L P+FQC+NGH+AC+ CC+K+ N+CPSC PIGY RCRA+EKV+E+ +V+C N+ YGCK
Sbjct: 120 LKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCK 179
Query: 155 VTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVT 214
+ SYG + HE++C PCSCPI DC++ G L H A+HK+ + F++N + ++
Sbjct: 180 ESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTIS 239
Query: 215 LNVKNRFIVLQEEGDGVLFILSSRSETLGHVISVSCIAPSCKGC--LFYSIFAGPAGSTV 272
L++ + +LQEE DG + ++ +SVSCIAP G L + S +
Sbjct: 240 LDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLL 299
Query: 273 RFQSFTKNIQNRVDNPPSTGFLLVPIESFGSSGDLKLELCI 313
+ KNIQ + P GF+L+P F + +L L++ I
Sbjct: 300 KQGFMVKNIQKVTNEHPEDGFMLIPSYLFSGNDNLNLQIWI 340
>sp|Q9C6H3|SINL2_ARATH E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana
GN=At1g66620 PE=2 SV=1
Length = 313
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/271 (40%), Positives = 148/271 (54%), Gaps = 19/271 (7%)
Query: 52 ESVDNGGNGEKADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACST 111
ESV+NGG A R+G T+ + ++ DCPIC +LT+P+FQC+NGHIACS+
Sbjct: 20 ESVENGGGDAVA--------RSG----TLFELDLLDCPICCHALTSPIFQCDNGHIACSS 67
Query: 112 CCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPH 171
CC+K+ NKCPSC PIG R R +E+V+E+V VTC N +GC SYGK+ HEK C
Sbjct: 68 CCTKLRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKFSYGKELIHEKDCRF 127
Query: 172 VPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNVKNRFIVLQEEGDGV 231
C CP P+CN+ G LY HF H ++ L + + +VLQ G G
Sbjct: 128 ALCYCPAPNCNYSGVYKDLYSHFYVNHYDTWNQIGCGNFAGAWLRISEKILVLQ-YGQGP 186
Query: 232 LFILSSRSETLGHVISVSCIAPSCKGC---LFYSIFAGPAG--STVRFQSFTKN-IQNRV 285
L + ET G ++V+CIAP G F + P G ST+ F+S N IQ
Sbjct: 187 LIAVQCFKETQGMYVTVNCIAPCAPGVGELSFELSYKMPMGGNSTMMFKSEEMNRIQKVS 246
Query: 286 DNPPSTGFLLVPIESFGSSGDLKLELCIRRL 316
P F+LVP G LK+E+CIR+L
Sbjct: 247 FQTPEKDFMLVPYYFLGDFSTLKMEICIRKL 277
>sp|Q9FKD9|SINL6_ARATH Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis
thaliana GN=At5g37870 PE=3 SV=1
Length = 281
Score = 187 bits (476), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 143/246 (58%), Gaps = 7/246 (2%)
Query: 77 SVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIE 136
S +TD ++ DCPICY++L PVFQC NGH+ACS+CC K+ NKCP+C P+G+ RCRA+E
Sbjct: 34 SAMLTDLDILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAME 93
Query: 137 KVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKHFSA 196
+VLESV V CR ++ GC T+ YG++ HEKIC PCSCP+ CN+ GS LY+H+
Sbjct: 94 RVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDL 153
Query: 197 KHKNSALHFLYNEV--VEVTLNVKNRFIVLQEEGDGVLFILSSRSETLGHVISVSCIAPS 254
H + + +N V + + + ++ ++ + +LF++ E G +SVSCIAPS
Sbjct: 154 THSTGSTAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPS 213
Query: 255 CKGCLFYS---IFAGPAGSTVRFQS-FTKNIQNRVDNPPSTGFLLVPIESFGSSGDLKLE 310
+S ++ G T+ +QS K + P F+L+P S L +
Sbjct: 214 APEVGEFSYGLLYTTWEGVTMTYQSPKVKKVLKVSSQRPKDSFMLIP-HSLLCGPLLGMM 272
Query: 311 LCIRRL 316
LCI L
Sbjct: 273 LCINEL 278
>sp|Q9FKD7|SINL7_ARATH E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana
GN=At5g37890 PE=2 SV=1
Length = 286
Score = 181 bits (458), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 139/246 (56%), Gaps = 6/246 (2%)
Query: 77 SVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIE 136
S + D E+ DCPICYE+ T P+FQC+NGH+ACS+CC K+ NKCP+C +P+G+NRCRA+E
Sbjct: 40 STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAME 99
Query: 137 KVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKHFSA 196
VLES+ + C N+ GCK +SYGK+ HEK C C+CP DCN+ S LY H+
Sbjct: 100 SVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRI 159
Query: 197 KHK--NSALHFLYNEVVEVTLNVKNRFIVLQEEGDGVLFILSSRSETLGHVISVSCIAPS 254
H N F+ + + V +N+ + ++ E LF + E G ++VSCIAPS
Sbjct: 160 THMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPS 219
Query: 255 CKGCLFYSIFAGPA--GSTVRFQS-FTKNIQNRVDNPPSTGFLLVPIESFGSSGDLKLEL 311
YS G TV +QS K + P F+L+P S L++ +
Sbjct: 220 SPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQENFMLIP-NSLLRGDVLEMRI 278
Query: 312 CIRRLD 317
+++L+
Sbjct: 279 SVKKLN 284
>sp|Q9C6H2|SINL3_ARATH E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana
GN=At1g66630 PE=2 SV=1
Length = 303
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 150/290 (51%), Gaps = 25/290 (8%)
Query: 51 DESVDNGGNGEKADLDLAGPSRNG---PFSVTVTDPEVFDCPICYESLTAPVFQCENGHI 107
+ S+D ++ G + +G S T+ + ++ DCPICY L AP++QC+NGHI
Sbjct: 9 ERSLDRPKRQRPVSMENVGGTASGSEVARSATLLELDLLDCPICYHKLGAPIYQCDNGHI 68
Query: 108 ACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHD--H 165
ACS+CC K+ KCP C IG+ R R +EK++E+V V+C N+ YGC + Y + + H
Sbjct: 69 ACSSCCKKVKYKCPYCSLRIGFFRSRILEKIVEAVVVSCPNAKYGCTEKIPYDNESESAH 128
Query: 166 EKICPHVPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNV---KNRFI 222
E++C C CP P+C + G LY+H+ A+HK F E L+V K F+
Sbjct: 129 ERVCEFTLCYCPEPECKYTGVYTDLYRHYHAEHKTDHSWFKCGEYNNAWLHVTGEKLSFL 188
Query: 223 VLQEEGDGVLFILSSRSETLGHVISVSCIAPSCKGCLFYS--IFAGPAGSTVRFQSFTKN 280
VLQE DG L ++ E+ G ++V+CIAP G +S + + F+S N
Sbjct: 189 VLQEYEDGPLVVVQCSMESHGICVTVNCIAPCAPGVGEFSCHLIYRNGSEKITFESKKMN 248
Query: 281 I------QNRVDNPP---------STGFLLVPIESFGSSGDLKLELCIRR 315
+N V N ++ F+ +P + LK+++CIRR
Sbjct: 249 KIQKVSPENHVANYKPIPYYLRGEASNFMSIPYYLLDEASILKMQICIRR 298
>sp|Q9C9M0|SINL4_ARATH E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana
GN=At1g66650 PE=2 SV=1
Length = 329
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 141/252 (55%), Gaps = 13/252 (5%)
Query: 73 NGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRC 132
+ P SVT+ + V +CP C++ L P+FQC NGH+AC CC K+ +C C PIG RC
Sbjct: 71 SSPKSVTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIGDVRC 130
Query: 133 RAIEKVLESVKVTCRNSNYGCKVTMSYGKK-HDHEKICPHVPCSCPIPDCNFVGSANHLY 191
RA+EKV+++ V+C N+ YGCK + +YG + HEK+C PCSCPI DCN++G L
Sbjct: 131 RAMEKVIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLI 190
Query: 192 KHFSAKHKNS---ALHFLYNE--VVEVTLNVKNRFIVLQEEGDGVLFILSSRSETLGHVI 246
HF A HK S F+++ + + L+ ++ ++ EE G LF++ + G
Sbjct: 191 NHFRATHKVSPGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFVVQGFIGSHGVYA 250
Query: 247 SVSCIAPSCKGCLFY--SIFAGPAGSTVRFQSFTKNIQN--RVDNPPSTGFLLVPIESFG 302
+VS IAP + S+ ST+R KNIQ + P FLL+P S+
Sbjct: 251 TVSHIAPMVPEVRKFSCSLARLRPYSTLRLGLEVKNIQKLRSQEEQPQEDFLLIP--SYM 308
Query: 303 SSGD-LKLELCI 313
+GD +K+E+ I
Sbjct: 309 VNGDHMKMEISI 320
>sp|Q9FKD5|SINL9_ARATH Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis
thaliana GN=At5g37910 PE=3 SV=1
Length = 276
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 132/251 (52%), Gaps = 14/251 (5%)
Query: 54 VDNGGNGEKADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCC 113
+ G GE+ +A R+ ++ + D ++ DCPIC E+LT+P+FQC+NGH+AC +CC
Sbjct: 11 ISQGDGGER----VAKRQRS---AIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCC 63
Query: 114 SKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVP 173
K+ NKCP+C P+G++R RA+E VLES+ + C N +GC + YGK+ HEK C
Sbjct: 64 PKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQ 123
Query: 174 CSCPIPDCNFVGSANHLYKHFSAKHKNSAL----HFLYNEVVEVTLNVKNRFIVLQEEGD 229
CSCP C++ GS LY H+ H + F ++ + ++ ++ +
Sbjct: 124 CSCPSSVCDYTGSYKDLYAHYKLTHSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEK 183
Query: 230 GVLFILSSRSETLGHVISVSCIAPSCK--GCLFYSIFAGPAGSTVRFQS-FTKNIQNRVD 286
+L + E G ++VS IAPS G Y + G TV ++S K +
Sbjct: 184 KLLLAVQCFREPCGVYVTVSFIAPSAPEVGEFSYQLSYNVDGHTVTYESPEVKRVCKVSI 243
Query: 287 NPPSTGFLLVP 297
P F+L+P
Sbjct: 244 ETPQENFMLIP 254
>sp|Q9FM14|SIL11_ARATH E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana
GN=At5g62800 PE=2 SV=2
Length = 314
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 123/236 (52%), Gaps = 22/236 (9%)
Query: 77 SVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPS--CCTPIGYNRCRA 134
S + D +V DCP+C+E LT P FQC++GHI C+ C +K+ NKCP C PIG RC A
Sbjct: 32 SAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFA 91
Query: 135 IEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKHF 194
+E+VLES V C+N+ +GC ++SY K HEK C + CSCP +CN+ GS N +Y HF
Sbjct: 92 MERVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHF 151
Query: 195 SAKHKNSALHFLYN----------EVVEVTLNVKNRFIVLQEEGDGVLFILSSRSETLGH 244
+H LYN V+V +N+K + VL E +LF++ E G
Sbjct: 152 MRRH-------LYNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKERHGV 204
Query: 245 VISVSCIAPSCKGC--LFYSIFAGPAGSTVRFQS-FTKNIQNRVDNPPSTGFLLVP 297
++V IAP Y + G V ++S K + P F+ VP
Sbjct: 205 YVTVRRIAPPASEFKKFSYRLSYSIDGHNVTYESPEVKRLLEVNSQIPDDSFMFVP 260
>sp|Q9FKD6|SINL8_ARATH E3 ubiquitin-protein ligase SINA-like 8 OS=Arabidopsis thaliana
GN=At5g37900 PE=1 SV=2
Length = 263
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 125/243 (51%), Gaps = 18/243 (7%)
Query: 77 SVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIE 136
S T+ D ++ DCPIC E LT P+FQCENGH+ACS+CC K+ NKCP+C +E
Sbjct: 24 SATLLDLDILDCPICCEGLTCPIFQCENGHLACSSCCPKLRNKCPAC----------PME 73
Query: 137 KVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKHFSA 196
+LES+ VTC N +GC + YGKK HE+ C CSCP DC + G LY H+
Sbjct: 74 NILESILVTCPNDMFGCTESFLYGKKSTHEEECIFSLCSCPSLDCEYSGRYEDLYDHYKL 133
Query: 197 KHKNSALH----FLYNEVVEVTLNVKNRFIVLQEEGDGVLFILSSRSETLGHVISVSCIA 252
H +++ F + + + + ++ + + +LF + E+ G ++VSCIA
Sbjct: 134 THISNSYWTTNCFRSSIPYKAPMLISDKIQITRVYEKKILFAVQCFRESCGVYVTVSCIA 193
Query: 253 PSCK--GCLFYSIFAGPAGSTVRFQS-FTKNIQNRVDNPPSTGFLLVPIESFGSS-GDLK 308
PS G Y I T+ ++S K ++ P F+L+P S D+K
Sbjct: 194 PSAPEVGQFSYQISYTVDEHTMVYRSPQMKRVRKVSFETPQENFMLIPHNLLRSELLDIK 253
Query: 309 LEL 311
L +
Sbjct: 254 LSI 256
>sp|Q7XA77|SINL5_ARATH E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana
GN=At1g66660 PE=2 SV=2
Length = 328
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 135/261 (51%), Gaps = 14/261 (5%)
Query: 63 ADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPS 122
D P + P + +D V DCP C E L P++QC NGH+ACS+CC K+ KC
Sbjct: 63 TDEQSGSPKSSQPVKLQSSD--VLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCSF 120
Query: 123 CCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCN 182
C IG RCRA+EKV+E+ V C N+ +GCK T +Y + HEK+C V CSCP+ +CN
Sbjct: 121 CRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPVSNCN 180
Query: 183 FVGSANHLYKHF-SAKHKNSALHFLYNEVVE----VTLNV-KNRFIVLQEEGDGVLFILS 236
+V S ++L H S H + V++ +N+ + + +V +EE +G L ++
Sbjct: 181 YVSSYSNLKSHACSTAHVWGEDDIHFQLVIDRPRIFNMNLGRKKTVVFKEEKEGDLIVVQ 240
Query: 237 SRSETLGHVISVSCIAPSCKGC--LFYSIFAGPAGSTVRFQSFTKNIQN-RVDNPPSTGF 293
+ G ++V+ IA G L S+ ST+R S K IQ R
Sbjct: 241 AFKGLEGVYVTVNRIAHMAPGIRDLSCSLAKLNEYSTLRSGSLVKKIQKVREKMHLEDDL 300
Query: 294 LLVPIESFGSSGD-LKLELCI 313
+ +P + SGD K+++CI
Sbjct: 301 MWIPPKML--SGDHWKMQICI 319
>sp|Q8T3Y0|SINAL_DROME Probable E3 ubiquitin-protein ligase sinah OS=Drosophila
melanogaster GN=sinah PE=1 SV=2
Length = 351
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 29/304 (9%)
Query: 41 EEETHHQEEDDESVDNGGNGE------KADLDL-AGPSRNGPFSVTVTDPE------VFD 87
EE TH +S D GE K + + +G GP T + + +
Sbjct: 46 EETTHVVVVKRQSPDAAAAGELVPSRRKDSVAVQSGIVATGPLDTTRSGARDDFLMALLE 105
Query: 88 CPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCR 147
CP+C+ + P+ QC GH+ CSTC SK + CP C + R A+EKV + C+
Sbjct: 106 CPVCFGYIMPPIMQCPRGHLICSTCRSK-LTICPVCRVFMTNIRSLAMEKVASKLIFPCK 164
Query: 148 NSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPD--CNFVGSANHLYKHFSAKHKNSALHF 205
+S++GC+ +SY +K HE+ C P CP PD C++ G +Y+H + H+N +
Sbjct: 165 HSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHEN-VITM 223
Query: 206 LYNEVVEVTLNVKNRFIV---LQEEGDGVLFILSSRSETLGHVISVSCIAPSCKGCL--- 259
N+++ + NV + + + G F+LS LG A G +
Sbjct: 224 EGNDIIFLATNVNLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFTACRMIGSMKDA 283
Query: 260 ---FYSIFAGPAGSTVRFQSFTKNIQNRVDNPPSTGFLLV---PIESFGSSGDLKLELCI 313
Y+I T+R+QS ++I+ + + FL++ +E F G+L L + I
Sbjct: 284 AEFVYNISLEAYNRTLRWQSKPRSIRENFSSFTNADFLVLNKHTVELFSEDGNLALNVVI 343
Query: 314 RRLD 317
R+++
Sbjct: 344 RKVE 347
>sp|Q9STN8|SINA4_ARATH E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana
GN=SINAT4 PE=2 SV=1
Length = 327
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 66 DLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCT 125
++ GP+ P + E+ +CP+C S+ P+ QC NGH CSTC ++ N+CP+C
Sbjct: 45 NIVGPTATAPATSVY---ELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQ 101
Query: 126 PIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNF 183
+G RC A+EKV ES+++ C+ N GC Y K HE +C P SCP +C
Sbjct: 102 ELGDIRCLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGI 161
Query: 184 VGSANHLYKHFSAKHK 199
VG L H HK
Sbjct: 162 VGDIPFLVAHLRDDHK 177
>sp|Q84JL3|SINA3_ARATH E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana
GN=SINAT3 PE=2 SV=1
Length = 326
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 73 NGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRC 132
+G T + E+ +CP+C S+ P+ QC NGH CSTC +++ N+CP+C +G RC
Sbjct: 48 SGLLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRC 107
Query: 133 RAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHL 190
A+EKV ES+++ C++ + GC Y K HE +C P SCP +C+ G L
Sbjct: 108 LALEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFL 167
Query: 191 YKHFSAKHK 199
H HK
Sbjct: 168 VAHLRDDHK 176
>sp|Q8S3N1|SINA5_ARATH E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana
GN=SINAT5 PE=1 SV=2
Length = 309
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 84 EVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVK 143
E+ +CP+C S+ P+ QC NGH CSTC S++ N+CP+C +G RC A+EKV ES++
Sbjct: 42 ELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLE 101
Query: 144 VTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHK 199
+ C+ N GC Y K HE C P SCP +C VG L H HK
Sbjct: 102 LPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHK 159
>sp|Q06985|SIA1B_MOUSE E3 ubiquitin-protein ligase SIAH1B OS=Mus musculus GN=Siah1b PE=2
SV=2
Length = 282
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
+F+CP+C++ + P+ QC++GH+ CS C K + CP+C P+G R A+EKV SV
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPK-LTCCPTCRGPLGSIRNLAVEKVANSVLF 96
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHKN 200
C+ S GC++T+ + KK +HE++C P SCP P C + GS + + H +HK+
Sbjct: 97 PCKYSASGCEITLPHTKKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKS 154
>sp|Q8IUQ4|SIAH1_HUMAN E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1
SV=2
Length = 282
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
+F+CP+C++ + P+ QC++GH+ CS C K + CP+C P+G R A+EKV SV
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPK-LTCCPTCRGPLGSIRNLAMEKVANSVLF 96
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHKN 200
C+ ++ GC++T+ + +K DHE++C P SCP P C + GS + + H +HK+
Sbjct: 97 PCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKS 154
>sp|Q7ZVG6|SIAH1_DANRE E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2
Length = 282
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Query: 70 PSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGY 129
P+ +G + +F+CP+C++ + P+ QC++GH+ CS C K + CP+C P+G
Sbjct: 23 PTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK-LTCCPTCRGPLGS 81
Query: 130 NRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSA 187
R A+EKV SV C+ ++ GC+VT+ + K +HE++C P SCP P C + GS
Sbjct: 82 IRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSL 141
Query: 188 NHLYKHFSAKHKN 200
+ + H +HK+
Sbjct: 142 DAVMPHLLHQHKS 154
>sp|Q920M9|SIAH1_RAT E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1
PE=1 SV=2
Length = 282
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
+F+CP+C++ + P+ QC++GH+ CS C K + CP+C P+G R A+EKV SV
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPK-LTCCPTCRGPLGSIRNLAMEKVANSVLF 96
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHKN 200
C+ ++ GC++T+ + +K +HE++C P SCP P C + GS + + H +HK+
Sbjct: 97 PCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKS 154
>sp|P61092|SIA1A_MOUSE E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1
SV=1
Length = 282
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
+F+CP+C++ + P+ QC++GH+ CS C K + CP+C P+G R A+EKV SV
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPK-LTCCPTCRGPLGSIRNLAMEKVANSVLF 96
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHKN 200
C+ ++ GC++T+ + +K +HE++C P SCP P C + GS + + H +HK+
Sbjct: 97 PCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKS 154
>sp|Q9C6H4|SINL1_ARATH E3 ubiquitin-protein ligase SINA-like 1 OS=Arabidopsis thaliana
GN=At1g66610 PE=2 SV=1
Length = 366
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 111/263 (42%), Gaps = 51/263 (19%)
Query: 59 NGEKADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMN 118
NGE D+ PS T++ ++ DCP+C ++L +FQ
Sbjct: 138 NGENGGRDVVVPSG------TLSQLDLLDCPVCSKALKISIFQ----------------- 174
Query: 119 KCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPI 178
+S+ + R + GC T SYG + HEK C C CP
Sbjct: 175 ---------------------QSLFLAKRQN--GCTETFSYGNELVHEKKCSFALCYCPA 211
Query: 179 PDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNVKNRFIVLQEEGDGVLFILSSR 238
P+CN+ G LY H++A HK F + V ++ +++ +VLQ+ DG L +L
Sbjct: 212 PNCNYAGVYKDLYSHYAANHKKLWTRFSCGYSMHVCMDFESKSLVLQQYSDGPLVVLQCF 271
Query: 239 SE-TLGHVISVSCIAPSCKGC--LFYSIFAGPAGSTVRFQSFTKN-IQNRVDNPPSTGFL 294
E G +V+CIAPS G Y + AG+T+ F+S N IQ P F+
Sbjct: 272 KEPPQGLFWTVNCIAPSAPGVGKFSYELSYSTAGNTLTFRSSEMNRIQKVSFQTPEKDFM 331
Query: 295 LVPIESFGSSGDLK-LELCIRRL 316
+P G K +CIR L
Sbjct: 332 FIPEYILCPMGLYKGTYICIRSL 354
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 77 SVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIE 136
S T+ + ++ DCPIC +LT P+FQC+ GHIACS+CC+ + NKCP C IG R R +E
Sbjct: 45 SGTLFELDLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIME 104
Query: 137 KVLESVKVTC 146
+V+E+ V C
Sbjct: 105 RVVEAFIVRC 114
>sp|P21461|SINA_DROME E3 ubiquitin-protein ligase sina OS=Drosophila melanogaster GN=sina
PE=1 SV=2
Length = 314
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
+F+CP+C++ + P+ QC +GH+ C +C SK + CP+C P+ R A+EKV +VK
Sbjct: 70 LFECPVCFDYVLPPILQCSSGHLVCVSCRSK-LTCCPTCRGPLANIRNLAMEKVASNVKF 128
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVP--CSCPIPDCNFVGSANHLYKHFSAKHKN 200
C++S YGC ++ Y +K +HE+ C P C CP C + G + + +H HK+
Sbjct: 129 PCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKS 186
>sp|P61093|SINA_DROER E3 ubiquitin-protein ligase sina OS=Drosophila erecta GN=sina PE=3
SV=1
Length = 314
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
+F+CP+C++ + P+ QC +GH+ C +C SK + CP+C P+ R A+EKV +VK
Sbjct: 70 LFECPVCFDYVLPPILQCSSGHLVCVSCRSK-LTCCPTCRGPLANIRNLAMEKVASNVKF 128
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVP--CSCPIPDCNFVGSANHLYKHFSAKHKN 200
C++S YGC ++ Y +K +HE+ C P C CP C + G + + +H HK+
Sbjct: 129 PCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKS 186
>sp|Q8I147|SINA_DROWI E3 ubiquitin-protein ligase sina OS=Drosophila willistoni GN=sina
PE=3 SV=1
Length = 331
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
+F+CP+C++ + P+ QC +GH+ C +C SK + CP+C P+ R A+EKV +VK
Sbjct: 87 LFECPVCFDYVLPPILQCSSGHLVCVSCRSK-LTCCPTCRGPLANIRNLAMEKVASNVKF 145
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVP--CSCPIPDCNFVGSANHLYKHFSAKHKN 200
C++S YGC ++ Y +K +HE+ C P C CP C + G + + +H HK+
Sbjct: 146 PCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKS 203
>sp|P93748|SINA1_ARATH Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana
GN=SINAT1 PE=3 SV=1
Length = 305
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 68 AGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPI 127
+G G F + E+ +CP+C + P+ QC NGH CS+C ++ N CP+C +
Sbjct: 37 SGSGSIGKFHSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYEL 96
Query: 128 GYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVG 185
G RC A+EKV ES++V CR N GC+ Y K HE+ C SCP +C+ G
Sbjct: 97 GNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTG 156
Query: 186 SANHLYKHFSAKHK 199
L H HK
Sbjct: 157 DIPTLVDHLKDDHK 170
>sp|Q9M2P4|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana
GN=SINAT2 PE=2 SV=1
Length = 308
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 84 EVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVK 143
E+ +CP+C + P+ QC NGH CS C ++ N CP+C +G RC A+EKV ES++
Sbjct: 56 ELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLE 115
Query: 144 VTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHK 199
V CR N GC Y K HE+ C P +CP +C+ G L H HK
Sbjct: 116 VPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHK 173
>sp|P29304|SINA_DROVI E3 ubiquitin-protein ligase sina OS=Drosophila virilis GN=sina PE=3
SV=1
Length = 314
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
+F+CP+C++ + P+ QC +GH+ C +C SK + CP+C P+ R A+E+V +VK
Sbjct: 70 LFECPVCFDYVLPPILQCSSGHLVCVSCRSK-LTCCPTCRGPLANIRNLAMEEVASNVKF 128
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVP--CSCPIPDCNFVGSANHLYKHFSAKHKN 200
C++S YGC ++ Y +K +HE+ C P C CP C + G + + +H HK+
Sbjct: 129 PCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKS 186
>sp|A8X679|SIAH1_CAEBR E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis briggsae
GN=siah-1 PE=3 SV=2
Length = 434
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
VF+CP+C E + P QC +GH+ CS C K + CP+C P R +EK+ +V+
Sbjct: 168 VFECPVCLEYMLPPYMQCPSGHLVCSNCRPK-LQCCPTCRGPTPSVRNLGLEKIANTVRF 226
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHKN 200
C+ SN GC + + K DHE++C + P SCP P C + G+ + H HK+
Sbjct: 227 PCKFSNSGCPLNFHHIDKMDHEELCEYRPYSCPCPGASCKWQGALADVMDHLKKVHKS 284
>sp|Q86MW9|SINA_SCHMA E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA
PE=1 SV=1
Length = 371
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 73 NGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRC 132
N S ++ +F+CP+C + P+ QC++GHI C++C SK ++ CP+C + R
Sbjct: 111 NTSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSK-LSSCPTCRGNLDNIRN 169
Query: 133 RAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHL 190
A+EK+ SV C+ S GC T Y K +HE C + P CP P C ++G +
Sbjct: 170 LAMEKLASSVLFPCKYSTSGCPETFHYTSKSEHEAACEYRPYDCPCPGASCKWLGELEQV 229
Query: 191 YKHFSAKHKN 200
H HK+
Sbjct: 230 MPHLVHHHKS 239
>sp|Q965X6|SIAH1_CAEEL E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis elegans
GN=siah-1 PE=1 SV=3
Length = 419
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKV 144
VF+CP+C E + P QC +GH+ CS C K + CP+C P R +EK+ +V+
Sbjct: 153 VFECPVCLEYMLPPYMQCSSGHLVCSNCRPK-LQCCPTCRGPTPSVRNLGLEKIANTVRF 211
Query: 145 TCRNSNYGCKVTMSYGKKHDHEKICPHVP--CSCPIPDCNFVGSANHLYKHFSAKHKN 200
C+ S GC + + K +HE++C P C CP C + G + + +H HK+
Sbjct: 212 PCKFSTSGCPLNFHHADKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKKIHKS 269
>sp|Q9I8X5|SIAH2_XENLA E3 ubiquitin-protein ligase siah2 OS=Xenopus laevis GN=siah2 PE=2
SV=1
Length = 313
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYN-RCRAIEKVLESVK 143
+F+CP+C++ + P+ QC+ GH+ C+ C K ++ CP+C + + R A+EKV +V
Sbjct: 66 LFECPVCFDYVLPPILQCQAGHLVCNQCRQK-LSCCPTCRASLTPSIRNLAMEKVASAVL 124
Query: 144 VTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHKN 200
C+ ++ GC +++ + +K +HE IC + P SCP P C + GS ++ +H + HK+
Sbjct: 125 FPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTHSHKS 183
>sp|Q7SYL3|SIAH2_DANRE E3 ubiquitin-protein ligase Siah2 OS=Danio rerio GN=siah2l PE=2
SV=2
Length = 331
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPIGYN-RCRAIEKVLESVK 143
+F+CP+C++ + P+ QC+ GH+ C+ C K ++ CP+C P+ + R A+EKV ++
Sbjct: 86 LFECPVCFDYVLPPILQCQAGHLVCNQCRQK-LSCCPTCRGPLTPSIRNLAMEKVASTLP 144
Query: 144 VTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHKN 200
C+ S+ GC +++ + +K +HE++C P +CP P C + GS + H HK+
Sbjct: 145 FPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHLMHAHKS 203
>sp|Q8R4T2|SIAH2_RAT E3 ubiquitin-protein ligase SIAH2 OS=Rattus norvegicus GN=Siah2
PE=1 SV=2
Length = 325
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSC---CTPIGYNRCRAIEKVLES 141
+F+CP+C++ + P+ QC+ GH+ C+ C K ++ CP+C TP N A+EKV +
Sbjct: 78 LFECPVCFDYVLPPILQCQAGHLVCNQCRQK-LSCCPTCRGALTPSIRNL--AMEKVASA 134
Query: 142 VKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHK 199
V C+ + GC +T+ + +K +HE IC + P SCP P C + GS + H HK
Sbjct: 135 VLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHK 194
Query: 200 N 200
+
Sbjct: 195 S 195
>sp|Q06986|SIAH2_MOUSE E3 ubiquitin-protein ligase SIAH2 OS=Mus musculus GN=Siah2 PE=1
SV=2
Length = 325
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSC---CTPIGYNRCRAIEKVLES 141
+F+CP+C++ + P+ QC+ GH+ C+ C K ++ CP+C TP N A+EKV +
Sbjct: 78 LFECPVCFDYVLPPILQCQAGHLVCNQCRQK-LSCCPTCRGALTPSIRNL--AMEKVASA 134
Query: 142 VKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHK 199
V C+ + GC +T+ + +K +HE IC + P SCP P C + GS + H HK
Sbjct: 135 VLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHK 194
Query: 200 N 200
+
Sbjct: 195 S 195
>sp|O43255|SIAH2_HUMAN E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1
SV=1
Length = 324
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 85 VFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSC---CTPIGYNRCRAIEKVLES 141
+F+CP+C++ + P+ QC+ GH+ C+ C K ++ CP+C TP N A+EKV +
Sbjct: 77 LFECPVCFDYVLPPILQCQAGHLVCNQCRQK-LSCCPTCRGALTPSIRNL--AMEKVASA 133
Query: 142 VKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIP--DCNFVGSANHLYKHFSAKHK 199
V C+ + GC +T+ + +K +HE IC + P SCP P C + GS + H HK
Sbjct: 134 VLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHK 193
Query: 200 N 200
+
Sbjct: 194 S 194
>sp|Q54FB9|Y0971_DICDI TNF receptor-associated factor family protein DDB_G0290971
OS=Dictyostelium discoideum GN=DDB_G0290971 PE=3 SV=1
Length = 445
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 39/152 (25%)
Query: 86 FDCPICYE-----SLTAPVFQCENGHIACSTCCS-KIMNK--CPSCCTPIG----YNRCR 133
F CPIC++ S VFQC +GH+AC +C S ++NK C C TP+ +R R
Sbjct: 21 FTCPICFDLYYSSSSKKEVFQCRDGHLACKSCWSDSLLNKKECMICRTPVNSMNELSRNR 80
Query: 134 AIEKVLESVKVTCRNSNY----------------------GCKVTMSYGKKHDHEKICPH 171
IE KV C NS + GCK ++ H+ C
Sbjct: 81 FIENEFLKKKVYCPNSFFFIENVNVDDSSMNEALIRDESNGCKEIITVEALEKHQVECQF 140
Query: 172 VPCSCPIPDCNFVGSANHLYKH-----FSAKH 198
CP C+ + + +H FS+K+
Sbjct: 141 RFEKCPFTGCDKILRLKQIAEHKIDCKFSSKY 172
>sp|Q1ZXR0|Y8444_DICDI TNF receptor-associated factor family protein DDB_G0268444
OS=Dictyostelium discoideum GN=DDB_G0268444 PE=2 SV=1
Length = 502
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 84 EVFDCPICYESL-TAPVFQCENGHIACSTCCSKIMNKCPSC--CTPI-----GYNRCRAI 135
E + C ICYES+ ++QC+ H C TC ++ + K C C I +R R I
Sbjct: 24 EKYSCSICYESVYKKEIYQCKEIHWFCKTCWAESLFKKKECMICRCIVKSISELSRNRFI 83
Query: 136 EKVLESVKVTCRNS-----------------NYGCKVTMSYGKKHDHEKICPHVPCSCPI 178
E+ ++KV C NS GCK ++ G+ H K C C
Sbjct: 84 EQDFLNIKVNCPNSFKYIDENKNNNNKIKDLENGCKDIITIGEIEKHLKQCKFTHIKCKF 143
Query: 179 PDCNFVGSANHLYKH 193
CN + N + KH
Sbjct: 144 IGCNKIIRLNQVEKH 158
>sp|Q557K0|Y3509_DICDI TNF receptor-associated factor family protein
DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum
GN=DDB_G0273433 PE=3 SV=1
Length = 450
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 78 VTVTDPEVFDCPICY--------ESLTAPVFQCENGHIACSTCCSK---IMNKCPSC--- 123
V D F C IC+ E+L+ V QC NGHI+C C ++ I +CPSC
Sbjct: 16 VNSDDLTPFQCQICFNSVIDFKKETLSFDVLQCRNGHISCHECWNRQLSIKQECPSCKVK 75
Query: 124 CTPIGYNRCRAIEKVLESVKVTCRN 148
P +R +E ++KV C N
Sbjct: 76 TLPSELSRNIFLENAFRALKVICPN 100
>sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus GN=RNF151 PE=2 SV=1
Length = 240
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 76 FSVTVTDPEV-FDCPICYESLTAPVFQCENGHIACSTCCSKIMNK---CPSCCTPIGYNR 131
++ ++ P+ F C +C+ L PV + HI C C + + + CP C + + +
Sbjct: 7 LNLFISPPDCNFLCSVCHGVLKRPV-RLPCSHIFCKKCILRWLARQKTCPCCRKEVRHRK 65
Query: 132 ---CRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSAN 188
++K++ ++V CRN+ GC+VT + H+ CP CP C
Sbjct: 66 MVHVNKLQKIIGRLEVKCRNAEAGCQVTCPLAHRKGHQDSCPFELMVCPNEGCMLRVPRG 125
Query: 189 HLYKH 193
L +H
Sbjct: 126 ALDEH 130
>sp|Q7ZW16|RNF41_DANRE E3 ubiquitin-protein ligase NRDP1 OS=Danio rerio GN=rnf41 PE=2 SV=1
Length = 318
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 88 CPICYESLTAPVFQCENGHIACSTCCSKIMNK---CPSCCTPIGYNRCRAIEKV----LE 140
CPIC L PV H C+ C ++ + CP T + R + ++ L
Sbjct: 18 CPICSGVLEEPVRAPHCEHAFCNACITQWFAQQQICPVDRTVVTLAHLRPVPRIMRNMLS 77
Query: 141 SVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVP 173
++++C N+ +GC T+ + H K C H P
Sbjct: 78 KLQISCDNAGFGCTATLRLDQLQSHLKDCEHNP 110
>sp|Q86L54|Y2829_DICDI TNF receptor-associated factor family protein DDB_G0272829
OS=Dictyostelium discoideum GN=DDB_G0272829 PE=3 SV=1
Length = 530
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 24/132 (18%)
Query: 86 FDCPICYESLTAPV-------FQCENGHIACSTCCSKIM---NKCPSCCTPIG-----YN 130
F C IC L + + QC NGH C TC I+ ++CP+C I N
Sbjct: 33 FKCQICEGLLISSLIPNRMKALQCINGHCFCLTCWESILEIKSECPTCRIQIQSMNTLSN 92
Query: 131 RCRAIEKVLESVKVTCRN-------SNY-GCKVTMSYGKKHDHEKICPHVPCSCPIPD-C 181
I+ + ES+K+ C N +N+ GCK ++ + HE C C I + C
Sbjct: 93 NLFIIKSISESIKIHCPNYLNFDNSNNFNGCKEIITIDEIDRHESKCEFRFIKCSINNQC 152
Query: 182 NFVGSANHLYKH 193
N + N KH
Sbjct: 153 NEIIRFNERDKH 164
>sp|Q96AX9|MIB2_HUMAN E3 ubiquitin-protein ligase MIB2 OS=Homo sapiens GN=MIB2 PE=1 SV=3
Length = 1013
Score = 40.8 bits (94), Expect = 0.014, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 84 EVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPI 127
E CPIC +S VFQC GH AC+ C S ++ CP C PI
Sbjct: 965 ERITCPICIDSHIRLVFQC--GHGACAPCGSA-LSACPICRQPI 1005
>sp|Q6FY76|RAD5_CANGA DNA repair protein RAD5 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RAD5 PE=3
SV=1
Length = 1151
Score = 40.4 bits (93), Expect = 0.018, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 60/147 (40%), Gaps = 33/147 (22%)
Query: 6 VGRLEEGEG--PSGNSKRQRRAPHRHPQTNLRDGEEEEEETHHQEEDDESVDNGGNGEKA 63
+G L+E + SGN+K + +T + D EEEE+E E D+
Sbjct: 829 IGTLDENDEDLSSGNNKLITESVD--VKTLIPDTEEEEDEVPPFENDE------------ 874
Query: 64 DLDLAGPSRNGPFSVTVTDPEVFDCPIC----YESLTAPVFQCENGHIACSTCCSKIMN- 118
LD S F + +C IC ES +A V +CE H+ C C + N
Sbjct: 875 -LDKLIESVEAKF-IDSNQLIPVECSICTAEPIESSSAVVTECE--HVFCKECLEEYGNF 930
Query: 119 --------KCPSCCTPIGYNRCRAIEK 137
KCP+C I NRC A EK
Sbjct: 931 QKEKSLQQKCPNCRRDINLNRCLAFEK 957
>sp|Q6J1I7|RN166_RAT RING finger protein 166 OS=Rattus norvegicus GN=Rnf166 PE=2 SV=1
Length = 237
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 55/147 (37%), Gaps = 34/147 (23%)
Query: 86 FDCPICYESLTAPVFQCENGHIACSTCCSKIMN----KCPSCCTPIG---YNRCRAIEKV 138
F CPIC E PV GH C C + CP C P ++ +EK
Sbjct: 31 FSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKATHVEKQ 90
Query: 139 LESVKVTCRNSNYGCKVTMSYGKKH------------DHEKICPHVPCSCPIPD------ 180
L S K CR N KVT++ + H + K P VP S PIP
Sbjct: 91 LSSYKAPCRGCNK--KVTLAKMRAHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRS 148
Query: 181 ---CNFVGSAN----HLYKHFSAKHKN 200
C + G+ N L KH H++
Sbjct: 149 TFACPYCGARNLDQQELVKHCVESHRS 175
>sp|Q3U9F6|RN166_MOUSE RING finger protein 166 OS=Mus musculus GN=Rnf166 PE=2 SV=1
Length = 237
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 55/147 (37%), Gaps = 34/147 (23%)
Query: 86 FDCPICYESLTAPVFQCENGHIACSTCCSKIMN----KCPSCCTPIG---YNRCRAIEKV 138
F CPIC E PV GH C C + CP C P ++ +EK
Sbjct: 31 FSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKATHVEKQ 90
Query: 139 LESVKVTCRNSNYGCKVTMSYGKKH------------DHEKICPHVPCSCPIPD------ 180
L S K CR N KVT++ + H + K P VP S PIP
Sbjct: 91 LSSYKAPCRGCNK--KVTLAKMRAHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRS 148
Query: 181 ---CNFVGSAN----HLYKHFSAKHKN 200
C + G+ N L KH H++
Sbjct: 149 TFACPYCGARNLDQQELVKHCVESHRS 175
>sp|Q54FC5|Y0965_DICDI TNF receptor-associated factor family protein DDB_G0290965
OS=Dictyostelium discoideum GN=DDB_G0290965 PE=3 SV=1
Length = 575
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 86 FDCPICYESL-TAPVFQCENGHIACSTCCS---KIMNKCPSCCTPIG----YNRCRAIEK 137
+ CPIC+E + +FQC++GH AC C KI +C C + + +RC IE+
Sbjct: 25 YSCPICFEFIYKKSIFQCKSGHFACKECWEKSLKIKKECMICRSKVNSINDLSRCLVIEQ 84
>sp|Q68LP1|MIB2_RAT E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus GN=Mib2 PE=2
SV=2
Length = 971
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 84 EVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPI 127
E CPIC +S VFQC GH AC+ C + +N CP C PI
Sbjct: 923 ERITCPICIDSHIRLVFQC--GHGACAPCGAA-LNACPICRQPI 963
>sp|Q8R516|MIB2_MOUSE E3 ubiquitin-protein ligase MIB2 OS=Mus musculus GN=Mib2 PE=1 SV=2
Length = 973
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 84 EVFDCPICYESLTAPVFQCENGHIACSTCCSKIMNKCPSCCTPI 127
E CPIC +S VFQC GH AC+ C + +N CP C PI
Sbjct: 925 ERITCPICIDSHIRLVFQC--GHGACAPCGAA-LNACPICRQPI 965
>sp|Q3KPU8|RN166_XENLA RING finger protein 166 OS=Xenopus laevis GN=rnf166 PE=2 SV=1
Length = 241
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 55/149 (36%), Gaps = 38/149 (25%)
Query: 86 FDCPICYESLTAPVFQCENGHIACSTC---CSKIMNK-CPSCCTPIG---YNRCRAIEKV 138
F CPIC E PV GH C C C ++ + CP C P ++ ++K
Sbjct: 35 FGCPICLEVYYKPVAIGSCGHTFCGECLQPCLQVSSPLCPLCRMPFDPKKVDKASNVDKQ 94
Query: 139 LESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHV--------------PCSCPIPD---- 180
L S K CR GC ++ K H CP V P S PIP
Sbjct: 95 LSSYKAPCR----GCSKKVTLAKMRAHISSCPKVQEQMANCPKFVPVLPTSQPIPSNIPN 150
Query: 181 -----CNFVGSAN----HLYKHFSAKHKN 200
C + G+ N L KH H+N
Sbjct: 151 RSTFVCPYCGARNLDQQELVKHCMENHRN 179
>sp|Q9CQ29|RN151_MOUSE RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1
Length = 239
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 86 FDCPICYESLTAPVFQCENGHIACSTCCSKIM---NKCPSCCTPIGYNRCRAIEKVLESV 142
F C +C+ L P + HI C C + + N CP C + + + K+ +++
Sbjct: 18 FLCSVCHGVLKRPT-RLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEVNKLRKTI 76
Query: 143 ---KVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDC 181
+V C+N+ GC T + +H+ CP +CP C
Sbjct: 77 GRLQVKCKNAAAGCLDTHPLAHRKEHQDSCPFELMACPNEGC 118
>sp|Q2KHN1|RN151_HUMAN RING finger protein 151 OS=Homo sapiens GN=RNF151 PE=2 SV=1
Length = 245
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 86 FDCPICYESLTAPV-FQCENGHIACSTCCSKIMNK---CPSCCTPIGYNRC---RAIEKV 138
F C +C+ L P C HI C C + + + CP C + + + K
Sbjct: 18 FVCSVCHGVLKRPARLPC--SHIFCKKCILRWLARQKTCPCCRKEVKRKKVVHMNKLRKT 75
Query: 139 LESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPIPDCNFVGSANHLYKH 193
+ ++V C+N++ GC VT + H+ CP +CP C L +H
Sbjct: 76 IGRLEVKCKNADAGCIVTCPLAHRKGHQDSCPFELTACPNEGCTSQVPRGTLAEH 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,880,178
Number of Sequences: 539616
Number of extensions: 5539965
Number of successful extensions: 32400
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 30770
Number of HSP's gapped (non-prelim): 1203
length of query: 328
length of database: 191,569,459
effective HSP length: 118
effective length of query: 210
effective length of database: 127,894,771
effective search space: 26857901910
effective search space used: 26857901910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)