BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020281
(328 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XXQ|A Chain A, Structure Of A Mannose-Specific Jacalin-Related Lectin
From Morus Nigra
pdb|1XXQ|B Chain B, Structure Of A Mannose-Specific Jacalin-Related Lectin
From Morus Nigra
pdb|1XXQ|C Chain C, Structure Of A Mannose-Specific Jacalin-Related Lectin
From Morus Nigra
pdb|1XXQ|D Chain D, Structure Of A Mannose-Specific Jacalin-Related Lectin
From Morus Nigra
pdb|1XXR|A Chain A, Structure Of A Mannose-Specific Jacalin-Related Lectin
From Morus Nigra In Complex With Mannose
pdb|1XXR|B Chain B, Structure Of A Mannose-Specific Jacalin-Related Lectin
From Morus Nigra In Complex With Mannose
pdb|1XXR|C Chain C, Structure Of A Mannose-Specific Jacalin-Related Lectin
From Morus Nigra In Complex With Mannose
pdb|1XXR|D Chain D, Structure Of A Mannose-Specific Jacalin-Related Lectin
From Morus Nigra In Complex With Mannose
Length = 161
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKH-GGRGGFK 72
+ VG WGG G WDDG ++ +R++ +S+G I + + YD G H G FK
Sbjct: 17 IEVGLWGGPGGNAWDDGSYTGIREINLSHGDAIGAFSVIYDLNGQPFTGPTHPGNEPSFK 76
Query: 73 TNKVKFNYPEEFLVSVX--XXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPM 130
T K+ ++P EFLVSV ++RSL F++NK+ YGP+G ++GT FSLP+
Sbjct: 77 TVKITLDFPNEFLVSVSGYTGVLARLATGKDVIRSLTFKTNKKTYGPYGKEEGTPFSLPI 136
Query: 131 AGGMIAGFHGRSSWFLESIGVHL 153
G+I GF GRS + +++IG HL
Sbjct: 137 ENGLIVGFKGRSGFVVDAIGFHL 159
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFS---NNGIIAGL 256
E L+ SGY+G T V++S+TF TN++ +GP G E+G FS NG+I G
Sbjct: 87 EFLVSVSGYTGVLARLATGKDVIRSLTFKTNKKTYGP--YGKEEGTPFSLPIENGLIVGF 144
Query: 257 PARKGRFIDSIGPHF 271
R G +D+IG H
Sbjct: 145 KGRSGFVVDAIGFHL 159
>pdb|1J4S|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 1)
pdb|1J4S|B Chain B, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 1)
pdb|1J4S|C Chain C, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 1)
pdb|1J4S|D Chain D, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 1)
Length = 149
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKT 73
+TVG WGG G WD+G ++ +RQ+ +SY I S + YD G KH + +K
Sbjct: 5 ITVGSWGGPGGNGWDEGSYTGIRQIELSYKEAIGSFSVIYDLNGDPFSGPKHTSKLPYKN 64
Query: 74 NKVKFNYPEEFLVSVXXXX---XXXXXXXPVLVRSLVFESNK-RKYGPFGLQQGTHFSLP 129
K++ +P+EFL SV PV VRSL F++NK R +GP+G ++GT+F+LP
Sbjct: 65 VKIELKFPDEFLESVSGYTGPFSALATPTPV-VRSLTFKTNKGRTFGPYGDEEGTYFNLP 123
Query: 130 MAGGMIAGFHGRSSWFLESIGVHL 153
+ G+I GF GR+ L++IG+H+
Sbjct: 124 IENGLIVGFKGRTGDLLDAIGIHM 147
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNR-RMHGPSGAGDEQGIFFS---NNGIIAG 255
E L SGY+G T T VV+S+TF TN+ R GP GDE+G +F+ NG+I G
Sbjct: 74 EFLESVSGYTGPFSALATPTPVVRSLTFKTNKGRTFGP--YGDEEGTYFNLPIENGLIVG 131
Query: 256 LPARKGRFIDSIGPH 270
R G +D+IG H
Sbjct: 132 FKGRTGDLLDAIGIH 146
>pdb|1J4T|A Chain A, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 2)
pdb|1J4T|B Chain B, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 2)
pdb|1J4T|C Chain C, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 2)
pdb|1J4T|D Chain D, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 2)
pdb|1J4T|E Chain E, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 2)
pdb|1J4T|F Chain F, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 2)
pdb|1J4T|G Chain G, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 2)
pdb|1J4T|H Chain H, Structure Of Artocarpin: A Lectin With Mannose Specificity
(Form 2)
pdb|1J4U|A Chain A, Structure Of Artocarpin Complexed With Me-Alpha-Mannose
pdb|1J4U|B Chain B, Structure Of Artocarpin Complexed With Me-Alpha-Mannose
pdb|1J4U|C Chain C, Structure Of Artocarpin Complexed With Me-Alpha-Mannose
pdb|1J4U|D Chain D, Structure Of Artocarpin Complexed With Me-Alpha-Mannose
Length = 149
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKT 73
+TVG WGG G WD+G ++ +RQ+ +SY I S + YD G KH + +K
Sbjct: 5 ITVGSWGGPGGNGWDEGSYTGIRQIELSYKEAIGSFSVIYDLNGDPFSGPKHTSKLPYKN 64
Query: 74 NKVKFNYPEEFLVSVXXXX---XXXXXXXPVLVRSLVFESNK-RKYGPFGLQQGTHFSLP 129
K++ +P+EFL SV PV VRSL F++NK R +GP+G ++GT+F+LP
Sbjct: 65 VKIELKFPDEFLESVSGYTGPFSALATPTPV-VRSLTFKTNKGRTFGPYGDEEGTYFNLP 123
Query: 130 MAGGMIAGFHGRSSWFLESIGVHL 153
+ G+I GF GR+ L++IG+H+
Sbjct: 124 IENGLIVGFKGRTGDLLDAIGIHM 147
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNR-RMHGPSGAGDEQGIFFS---NNGIIAG 255
E L SGY+G T T VV+S+TF TN+ R GP GDE+G +F+ NG+I G
Sbjct: 74 EFLESVSGYTGPFSALATPTPVVRSLTFKTNKGRTFGP--YGDEEGTYFNLPIENGLIVG 131
Query: 256 LPARKGRFIDSIGPH 270
R G +D+IG H
Sbjct: 132 FKGRTGDLLDAIGIH 146
>pdb|4AKD|A Chain A, High Resolution Structure Of Mannose Binding Lectin From
Champedak (cmb)
pdb|4AKD|B Chain B, High Resolution Structure Of Mannose Binding Lectin From
Champedak (cmb)
pdb|4AKD|C Chain C, High Resolution Structure Of Mannose Binding Lectin From
Champedak (cmb)
pdb|4AKD|D Chain D, High Resolution Structure Of Mannose Binding Lectin From
Champedak (cmb)
Length = 150
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKT 73
+TVGPWGG G WDDG ++ +RQ+ +SY I S + YD G S KH + +K
Sbjct: 6 ITVGPWGGSGGNGWDDGSYTGIRQIELSYKEAIGSFCVIYDLNGESFPGPKHTSKLPYKN 65
Query: 74 NKVKFNYPEEFLVSVXXXX---XXXXXXXPVLVRSLVFESNK-RKYGPFGLQQGTHFSLP 129
K++ +PEEFLVSV PV VRSL F++NK R +GP+G ++GT+F+LP
Sbjct: 66 VKIELQFPEEFLVSVSGYTGPFSALATPTPV-VRSLTFKTNKGRTFGPYGDEEGTYFNLP 124
Query: 130 MAGGMIAGFHGRSSWFLESIGVHL 153
+ G+I GF GR+ L++IGVH+
Sbjct: 125 IENGLIVGFKGRTGDLLDAIGVHM 148
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNR-RMHGPSGAGDEQGIFFS---NNGIIAG 255
E L+ SGY+G T T VV+S+TF TN+ R GP GDE+G +F+ NG+I G
Sbjct: 75 EFLVSVSGYTGPFSALATPTPVVRSLTFKTNKGRTFGP--YGDEEGTYFNLPIENGLIVG 132
Query: 256 LPARKGRFIDSIGPH 270
R G +D+IG H
Sbjct: 133 FKGRTGDLLDAIGVH 147
>pdb|3P8S|A Chain A, Crystal Structure Of Single Chain Recombinant Jacalin
Showing Highly Dynamic Posttranslational Excission Loop
That Reduces Binding Affinity
pdb|3P8S|B Chain B, Crystal Structure Of Single Chain Recombinant Jacalin
Showing Highly Dynamic Posttranslational Excission Loop
That Reduces Binding Affinity
Length = 157
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 14 VTVGPWGGQ-----NGARWDDGVFSSVRQVVISYG--AGIDSILIEYDKKGSSVWSDKHG 66
V VGPWG + NG +DDG F+ +R++ +SY I + + YD GS H
Sbjct: 10 VIVGPWGAKVSTSSNGKAFDDGAFTGIREINLSYNKETAIGDLQVVYDLNGSPYVGQNHK 69
Query: 67 G-RGGFKTNKVKFNYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTH 125
GF K+ ++P E+++ V V+VRSL F++NK+ YGP+G+ GT
Sbjct: 70 SFITGFTPVKISLDFPSEYIMEVSGYTGNVSGY--VVVRSLTFKTNKKTYGPYGVTSGTP 127
Query: 126 FSLPMAGGMIAGFHGRSSWFLESIGVHL 153
F+LP+ G+I GF G ++L+ ++L
Sbjct: 128 FNLPIENGLIVGFKGSIGYWLDCFSMYL 155
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 177 IPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGP 236
+ + + F T K + E ++ SGY+G+ + VV+S+TF TN++ +GP
Sbjct: 64 VGQNHKSFITGFTPVKISLDFPSEYIMEVSGYTGNV----SGYVVVRSLTFKTNKKTYGP 119
Query: 237 SGAGDEQGIFFS---NNGIIAGLPARKGRFIDS 266
G G F+ NG+I G G ++D
Sbjct: 120 YGV--TSGTPFNLPIENGLIVGFKGSIGYWLDC 150
>pdb|2JZ4|A Chain A, Putative 32 Kda Myrosinase Binding Protein At3g16450.1
From Arabidopsis Thaliana
Length = 299
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 20 GGQNGARWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKF 78
GG G WDDG + V++V + G GI ++ EY+K ++ +HG + +
Sbjct: 160 GGDEGTAWDDGAYDGVKKVYVGQGQDGISAVKFEYNKGAENIVGGEHGKPTLLGFEEFEI 219
Query: 79 NYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGF 138
+YP E++ +V +++ L F++NK+ PFGL+ GT F L G I GF
Sbjct: 220 DYPSEYITAVEGTYDKIFGSDGLIITMLRFKTNKQTSAPFGLEAGTAFELKEEGHKIVGF 279
Query: 139 HGRSSWFLESIGVHLKPL 156
HG++S L GVH+ PL
Sbjct: 280 HGKASELLHQFGVHVMPL 297
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 26 RWDDGVFSSVRQVVISYGA-GIDSILIEYDKKGSSVWSDKHGGRG--GFKTNKVKFNYPE 82
WDDGV VR+V + G G+ SI + Y K V +HG + GF+T +V +
Sbjct: 14 SWDDGVHDGVRKVHVGQGQDGVSSINVVYAKDSQDVEGGEHGKKTLLGFETFEVD---AD 70
Query: 83 EFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYG-PFGLQQGTHFSLP-MAGGMIAGFHG 140
+++V+V ++ S+ F + K K P+GL+ F L GG + GFHG
Sbjct: 71 DYIVAVQVTYDNVFGQDSDIITSITFNTFKGKTSPPYGLETQKKFVLKDKNGGKLVGFHG 130
Query: 141 RSSWFLESIGVHL 153
R+ L ++G +
Sbjct: 131 RAGEALYALGAYF 143
>pdb|1VBP|A Chain A, Crystal Structure Of Artocarpin-Mannopentose Complex
pdb|1VBP|B Chain B, Crystal Structure Of Artocarpin-Mannopentose Complex
Length = 149
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 32 FSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSVXXX 91
++ +RQ+ +SY I S + YD G KH + +K K++ +P+EFL SV
Sbjct: 23 YTGIRQIELSYKEAIGSFSVIYDLNGDPFSGPKHTSKLPYKNVKIELKFPDEFLESVSGY 82
Query: 92 X---XXXXXXXPVLVRSLVFESNK-RKYGPFGLQQGTHFSLPMAGGMIAGFHGRSSWFLE 147
PV VRSL F++NK R +GP+G ++GT+F+LP+ G+I GF GR+ L+
Sbjct: 83 TGPFSALATPTPV-VRSLTFKTNKGRTFGPYGDEEGTYFNLPIENGLIVGFKGRTGDLLD 141
Query: 148 SIGVHL 153
+IG+H+
Sbjct: 142 AIGIHM 147
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNR-RMHGPSGAGDEQGIFFS---NNGIIAG 255
E L SGY+G T T VV+S+TF TN+ R GP GDE+G +F+ NG+I G
Sbjct: 74 EFLESVSGYTGPFSALATPTPVVRSLTFKTNKGRTFGP--YGDEEGTYFNLPIENGLIVG 131
Query: 256 LPARKGRFIDSIGPH 270
R G +D+IG H
Sbjct: 132 FKGRTGDLLDAIGIH 146
>pdb|1VBO|A Chain A, Crystal Structure Of Artocarpin-Mannotriose Complex
pdb|1VBO|B Chain B, Crystal Structure Of Artocarpin-Mannotriose Complex
pdb|1VBO|C Chain C, Crystal Structure Of Artocarpin-Mannotriose Complex
pdb|1VBO|D Chain D, Crystal Structure Of Artocarpin-Mannotriose Complex
pdb|1VBO|E Chain E, Crystal Structure Of Artocarpin-Mannotriose Complex
pdb|1VBO|F Chain F, Crystal Structure Of Artocarpin-Mannotriose Complex
pdb|1VBO|G Chain G, Crystal Structure Of Artocarpin-Mannotriose Complex
pdb|1VBO|H Chain H, Crystal Structure Of Artocarpin-Mannotriose Complex
Length = 149
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKT 73
+TVGPWGG G WDDG ++ +RQ+ +SY I S + YD G KH + +K
Sbjct: 5 ITVGPWGGPGGNGWDDGSYTGIRQIELSYKEAIGSFSVIYDLNGDPFSGPKHTSKLPYKN 64
Query: 74 NKVKFNYPEEFLVSVXXXX---XXXXXXXPVLVRSLVFESNK-RKYGPFGLQQGTHFSLP 129
K++ +P+EFL SV PV VRSL F++NK R +GP+G ++GT+F+LP
Sbjct: 65 VKIELKFPDEFLESVSGYTGPFSALATPTPV-VRSLTFKTNKGRTFGPYGDEEGTYFNLP 123
Query: 130 MAGGMIAGFHGRSSWFLESIGVHL 153
+ G+I GF GR+ L++IG+H+
Sbjct: 124 IENGLIVGFKGRTGDLLDAIGIHM 147
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNR-RMHGPSGAGDEQGIFFS---NNGIIAG 255
E L SGY+G T T VV+S+TF TN+ R GP GDE+G +F+ NG+I G
Sbjct: 74 EFLESVSGYTGPFSALATPTPVVRSLTFKTNKGRTFGP--YGDEEGTYFNLPIENGLIVG 131
Query: 256 LPARKGRFIDSIGPH 270
R G +D+IG H
Sbjct: 132 FKGRTGDLLDAIGIH 146
>pdb|1ZGR|A Chain A, Crystal Structure Of The Parkia Platycephala Seed Lectin
pdb|1ZGR|B Chain B, Crystal Structure Of The Parkia Platycephala Seed Lectin
pdb|1ZGS|A Chain A, Parkia Platycephala Seed Lectin In Complex With 5-Bromo-4-
Chloro-3-Indolyl-A-D-Mannose
pdb|1ZGS|B Chain B, Parkia Platycephala Seed Lectin In Complex With 5-Bromo-4-
Chloro-3-Indolyl-A-D-Mannose
Length = 447
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 133/298 (44%), Gaps = 56/298 (18%)
Query: 14 VTVGPWGGQNGARWDDG----VFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRG 69
++ GPWGG G DD V S ++ ++I A I+SI + D G +G G
Sbjct: 154 ISFGPWGGPAG---DDAFNFKVGSWIKDIIIYADAAINSIAFK-DANGHC-----YGKFG 204
Query: 70 GFKTN------KVKFNYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQG 123
G N KV+ + E L S+ +V SL F +N K+GPFG+ G
Sbjct: 205 GQDPNDIGVEKKVEIDGNLEHLKSISGTYGNYKGFE--VVTSLSFITNVTKHGPFGIASG 262
Query: 124 THFSLPMAGGMIAGFHGRSSWFLESIGVHLKPLLIQ--------------------NPPI 163
T FS+P+ G ++ GFHG+S ++L+SIG+++KP ++ N I
Sbjct: 263 TSFSIPIEGSLVTGFHGKSGYYLDSIGIYVKPRDVEGSISIGPWGGSGGDPWSYTANEGI 322
Query: 164 N--LSSASQNYVSNEIPEKSRGFEMAT--------TREKQD-SIYQP-EILIHKSGYSGS 211
N + A N S + S G + AT T EK SI P E L SG G
Sbjct: 323 NQIIIYAGSNIKSVAFKDTS-GLDSATFGGVNPKDTGEKNTVSINWPSEYLTSISGTYGQ 381
Query: 212 AILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFS-NNGIIAGLPARKGRFIDSIG 268
+ TT+ S++F TN +GP G +N ++ G R G ++D+IG
Sbjct: 382 YKFKDVFTTIT-SLSFTTNLATYGPFGKASATSFSIPIHNNMVVGFHGRAGDYLDAIG 438
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGG---RGG 70
+++GPWGG G W + Q++I G+ I S+ K S + S GG +
Sbjct: 301 ISIGPWGGSGGDPWSYTANEGINQIIIYAGSNIKSVAF---KDTSGLDSATFGGVNPKDT 357
Query: 71 FKTNKVKFNYPEEFLVSVXXXXXXXXXXXP-VLVRSLVFESNKRKYGPFGLQQGTHFSLP 129
+ N V N+P E+L S+ + SL F +N YGPFG T FS+P
Sbjct: 358 GEKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNLATYGPFGKASATSFSIP 417
Query: 130 MAGGMIAGFHGRSSWFLESIGVHLKP 155
+ M+ GFHGR+ +L++IG+ +KP
Sbjct: 418 IHNNMVVGFHGRAGDYLDAIGIFVKP 443
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKT 73
++VGPWGG G W ++ ++VI I SI K S S GG+ +
Sbjct: 6 ISVGPWGGSGGNYWSFKANHAITEIVIHVKDNIKSISF---KDASGDISGTFGGKDPREN 62
Query: 74 -----NKVKFNYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFG-LQQGTHFS 127
K+K ++P E+L S+ +++RSL F +N YGPFG G FS
Sbjct: 63 EKGDEKKIKIHWPTEYLKSISGSYGDYNGV--LVIRSLSFITNLTTYGPFGSTSGGESFS 120
Query: 128 LPMAGGMIAGFHGRSSWFLESIGVHLKPL 156
+P+A ++ GFHGR+ ++L+++G+ ++P+
Sbjct: 121 IPIADSVVVGFHGRAGYYLDALGIFVQPV 149
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 221 VVKSVTFLTNRRMHGPSG--AGDEQGIFFSNNGIIAGLPARKGRFIDSIG------PHFI 272
V++S++F+TN +GP G +G E + ++ G R G ++D++G PH
Sbjct: 94 VIRSLSFITNLTTYGPFGSTSGGESFSIPIADSVVVGFHGRAGYYLDALGIFVQPVPHGT 153
Query: 273 EEKPPIPRPL-NDSFN 287
P P +D+FN
Sbjct: 154 ISFGPWGGPAGDDAFN 169
>pdb|4AK4|A Chain A, High Resolution Structure Of Galactose Binding Lectin From
Champedak (cgb)
pdb|4AK4|C Chain C, High Resolution Structure Of Galactose Binding Lectin From
Champedak (cgb)
pdb|4AK4|E Chain E, High Resolution Structure Of Galactose Binding Lectin From
Champedak (cgb)
pdb|4AK4|G Chain G, High Resolution Structure Of Galactose Binding Lectin From
Champedak (cgb)
pdb|4AK4|I Chain I, High Resolution Structure Of Galactose Binding Lectin From
Champedak (cgb)
pdb|4AK4|K Chain K, High Resolution Structure Of Galactose Binding Lectin From
Champedak (cgb)
pdb|4AK4|M Chain M, High Resolution Structure Of Galactose Binding Lectin From
Champedak (cgb)
pdb|4AK4|O Chain O, High Resolution Structure Of Galactose Binding Lectin From
Champedak (cgb)
Length = 133
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Query: 24 GARWDDGVFSSVRQVVISYG--AGIDSILIEYDKKGSSVWSDKHGGR-GGFKTNKVKFNY 80
G +DDGVF+ +R++ +SY I + YD GS + H GF K+ ++
Sbjct: 1 GKAFDDGVFTGIREINLSYNKETAIGDFQVVYDLNGSPYVGENHKSFITGFTPVKISLDF 60
Query: 81 PEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHG 140
P E+++ V V+VRSL F++NK+ YGP+G+ GT FSLP+ G+I GF G
Sbjct: 61 PSEYIMEVSGYTGKVSGY--VVVRSLTFKTNKKTYGPYGVTSGTPFSLPIENGLIVGFKG 118
Query: 141 RSSWFLESIGVHL 153
++L+ ++L
Sbjct: 119 SIGYWLDYFSMYL 131
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 177 IPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGP 236
+ E + F T K + E ++ SGY+G + VV+S+TF TN++ +GP
Sbjct: 40 VGENHKSFITGFTPVKISLDFPSEYIMEVSGYTGKV----SGYVVVRSLTFKTNKKTYGP 95
Query: 237 SGAGDEQGIFFS---NNGIIAGLPARKGRFID 265
G G FS NG+I G G ++D
Sbjct: 96 YGV--TSGTPFSLPIENGLIVGFKGSIGYWLD 125
>pdb|4AKB|A Chain A, Structure Of Galactose Binding Lectin From Champedak (cgb)
With Galactose
pdb|4AKB|C Chain C, Structure Of Galactose Binding Lectin From Champedak (cgb)
With Galactose
pdb|4AKB|E Chain E, Structure Of Galactose Binding Lectin From Champedak (cgb)
With Galactose
pdb|4AKB|G Chain G, Structure Of Galactose Binding Lectin From Champedak (cgb)
With Galactose
pdb|4AKC|A Chain A, Structure Of Galactose Binding Lectin From Champedak (cgb)
With Gal(beta)1,3-galnac
pdb|4AKC|C Chain C, Structure Of Galactose Binding Lectin From Champedak (cgb)
With Gal(beta)1,3-galnac
pdb|4AKC|E Chain E, Structure Of Galactose Binding Lectin From Champedak (cgb)
With Gal(beta)1,3-galnac
pdb|4AKC|G Chain G, Structure Of Galactose Binding Lectin From Champedak (cgb)
With Gal(beta)1,3-galnac
Length = 133
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 24 GARWDDGVFSSVRQVVISYG--AGIDSILIEYDKKGSSVWSDKHGGR-GGFKTNKVKFNY 80
G +DDG F+ +R++ +SY I + YD GS + H GF K+ ++
Sbjct: 1 GKAFDDGAFTGIREINLSYNKETAIGDFQVVYDLNGSPYVGENHKSFITGFTPVKISLDF 60
Query: 81 PEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHG 140
P E+++ V V+VRSL F++NK+ YGP+G+ GT FSLP+ G+I GF G
Sbjct: 61 PSEYIMEVSGYTGKVSGY--VVVRSLTFKTNKKTYGPYGVTSGTPFSLPIENGLIVGFKG 118
Query: 141 RSSWFLESIGVHL 153
++L+ ++L
Sbjct: 119 SIGYWLDYFSMYL 131
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 177 IPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGP 236
+ E + F T K + E ++ SGY+G + VV+S+TF TN++ +GP
Sbjct: 40 VGENHKSFITGFTPVKISLDFPSEYIMEVSGYTGKV----SGYVVVRSLTFKTNKKTYGP 95
Query: 237 SGAGDEQGIFFS---NNGIIAGLPARKGRFID 265
G G FS NG+I G G ++D
Sbjct: 96 YGV--TSGTPFSLPIENGLIVGFKGSIGYWLD 125
>pdb|1JAC|A Chain A, A Novel Mode Of Carbohydrate Recognition In Jacalin, A
Moraceae Plant Lectin With A Beta-Prism
pdb|1JAC|C Chain C, A Novel Mode Of Carbohydrate Recognition In Jacalin, A
Moraceae Plant Lectin With A Beta-Prism
pdb|1JAC|E Chain E, A Novel Mode Of Carbohydrate Recognition In Jacalin, A
Moraceae Plant Lectin With A Beta-Prism
pdb|1JAC|G Chain G, A Novel Mode Of Carbohydrate Recognition In Jacalin, A
Moraceae Plant Lectin With A Beta-Prism
pdb|1KU8|A Chain A, Crystal Structure Of Jacalin
pdb|1KU8|C Chain C, Crystal Structure Of Jacalin
pdb|1KU8|E Chain E, Crystal Structure Of Jacalin
pdb|1KU8|G Chain G, Crystal Structure Of Jacalin
pdb|1KUJ|A Chain A, Crystal Structure Of Jacalin Complexed With 1-o-methyl-
Alpha-d-mannose
pdb|1KUJ|C Chain C, Crystal Structure Of Jacalin Complexed With 1-o-methyl-
Alpha-d-mannose
pdb|1KUJ|E Chain E, Crystal Structure Of Jacalin Complexed With 1-o-methyl-
Alpha-d-mannose
pdb|1KUJ|G Chain G, Crystal Structure Of Jacalin Complexed With 1-o-methyl-
Alpha-d-mannose
pdb|1M26|A Chain A, Crystal Structure Of Jacalin-T-Antigen Complex
pdb|1M26|C Chain C, Crystal Structure Of Jacalin-T-Antigen Complex
pdb|1M26|E Chain E, Crystal Structure Of Jacalin-T-Antigen Complex
pdb|1M26|G Chain G, Crystal Structure Of Jacalin-T-Antigen Complex
pdb|1UGW|C Chain C, Crystal Structure Of Jacalin- Gal Complex
pdb|1UGW|E Chain E, Crystal Structure Of Jacalin- Gal Complex
pdb|1UGY|C Chain C, Crystal Structure Of Jacalin- Mellibiose (Gal-Alpha(1-6)-
Glc) Complex
pdb|1UGY|E Chain E, Crystal Structure Of Jacalin- Mellibiose (Gal-Alpha(1-6)-
Glc) Complex
pdb|1UH0|A Chain A, Crystal Structure Of Jacalin- Me-Alpha-Galnac Complex
pdb|1UH0|C Chain C, Crystal Structure Of Jacalin- Me-Alpha-Galnac Complex
pdb|1UH0|E Chain E, Crystal Structure Of Jacalin- Me-Alpha-Galnac Complex
pdb|1UH0|G Chain G, Crystal Structure Of Jacalin- Me-Alpha-Galnac Complex
pdb|1UH1|A Chain A, Crystal Structure Of Jacalin-
Galnac-Beta(1-3)-Gal-Alpha-O-Me Complex
pdb|1UH1|C Chain C, Crystal Structure Of Jacalin-
Galnac-Beta(1-3)-Gal-Alpha-O-Me Complex
pdb|1UH1|E Chain E, Crystal Structure Of Jacalin-
Galnac-Beta(1-3)-Gal-Alpha-O-Me Complex
pdb|1UH1|G Chain G, Crystal Structure Of Jacalin-
Galnac-Beta(1-3)-Gal-Alpha-O-Me Complex
pdb|1PXD|A Chain A, Crystal Structure Of The Complex Of Jacalin With Meso-
Tetrasulphonatophenylporphyrin.
pdb|1WS4|C Chain C, Crystal Structure Of Jacalin- Me-alpha-mannose Complex:
Promiscuity Vs Specificity
pdb|1WS4|E Chain E, Crystal Structure Of Jacalin- Me-alpha-mannose Complex:
Promiscuity Vs Specificity
pdb|1WS5|C Chain C, Crystal Structure Of Jacalin-Me-Alpha-Mannose Complex:
Promiscuity Vs Specificity
pdb|1WS5|E Chain E, Crystal Structure Of Jacalin-Me-Alpha-Mannose Complex:
Promiscuity Vs Specificity
Length = 133
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 24 GARWDDGVFSSVRQVVISYG--AGIDSILIEYDKKGSSVWSDKHGGR-GGFKTNKVKFNY 80
G +DDG F+ +R++ +SY I + YD GS H GF K+ ++
Sbjct: 1 GKAFDDGAFTGIREINLSYNKETAIGDFQVVYDLNGSPYVGQNHKSFITGFTPVKISLDF 60
Query: 81 PEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHG 140
P E+++ V V+VRSL F++NK+ YGP+G+ GT F+LP+ G+I GF G
Sbjct: 61 PSEYIMEVSGYTGNVSGY--VVVRSLTFKTNKKTYGPYGVTSGTPFNLPIENGLIVGFKG 118
Query: 141 RSSWFLESIGVHL 153
++L+ ++L
Sbjct: 119 SIGYWLDYFSMYL 131
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 177 IPEKSRGFEMATTREKQDSIYQPEILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGP 236
+ + + F T K + E ++ SGY+G+ + VV+S+TF TN++ +GP
Sbjct: 40 VGQNHKSFITGFTPVKISLDFPSEYIMEVSGYTGNV----SGYVVVRSLTFKTNKKTYGP 95
Query: 237 SGAGDEQGIFFS---NNGIIAGLPARKGRFID 265
G G F+ NG+I G G ++D
Sbjct: 96 YGV--TSGTPFNLPIENGLIVGFKGSIGYWLD 125
>pdb|1JOT|A Chain A, Structure Of The Lectin Mpa Complexed With T-Antigen
Disaccharide
pdb|3LLY|A Chain A, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
pdb|3LLZ|A Chain A, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With Gal-Beta-1,3-Galnac
pdb|3LM1|A Chain A, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With P-Nitrophenyl-Galnac
pdb|3LM1|C Chain C, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With P-Nitrophenyl-Galnac
pdb|3LM1|E Chain E, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With P-Nitrophenyl-Galnac
pdb|3LM1|G Chain G, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With P-Nitrophenyl-Galnac
pdb|3LM1|I Chain I, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With P-Nitrophenyl-Galnac
pdb|3LM1|K Chain K, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With P-Nitrophenyl-Galnac
pdb|3LM1|M Chain M, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With P-Nitrophenyl-Galnac
pdb|3LM1|O Chain O, Crystal Structure Analysis Of Maclura Pomifera Agglutinin
Complex With P-Nitrophenyl-Galnac
Length = 133
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 24 GARWDDGVFSSVRQVVISYGA--GIDSILIEYDKKGSSVWSDKHGGR-GGFKTNKVKFNY 80
G +DDG ++ +R++ Y + I + + YD G ++ H GFK K+ +
Sbjct: 1 GVTFDDGAYTGIREINFEYNSETAIGGLRVTYDLNGMPFVAEDHKSFITGFKPVKISLEF 60
Query: 81 PEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHG 140
P E++V V ++RSL F++NK+ YGP+G+ GT FSLP+ G+I GF G
Sbjct: 61 PSEYIVEVSGYVGKVEGY--TVIRSLTFKTNKQTYGPYGVTNGTPFSLPIENGLIVGFKG 118
Query: 141 RSSWFLESIGVHL 153
++L+ ++L
Sbjct: 119 SIGYWLDYFSIYL 131
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFS---NNGIIAGL 256
E ++ SGY G TV++S+TF TN++ +GP G G FS NG+I G
Sbjct: 63 EYIVEVSGYVGKV----EGYTVIRSLTFKTNKQTYGPYGV--TNGTPFSLPIENGLIVGF 116
Query: 257 PARKGRFID 265
G ++D
Sbjct: 117 KGSIGYWLD 125
>pdb|1TOQ|A Chain A, Crystal Structure Of A Galactose Specific Lectin From
Artocarpus Hirsuta In Complex With Methyl-a-d-galactose
pdb|1TOQ|C Chain C, Crystal Structure Of A Galactose Specific Lectin From
Artocarpus Hirsuta In Complex With Methyl-a-d-galactose
pdb|1TOQ|E Chain E, Crystal Structure Of A Galactose Specific Lectin From
Artocarpus Hirsuta In Complex With Methyl-a-d-galactose
pdb|1TOQ|G Chain G, Crystal Structure Of A Galactose Specific Lectin From
Artocarpus Hirsuta In Complex With Methyl-a-d-galactose
pdb|1TP8|A Chain A, Crystal Structure Of A Galactose Specific Lectin From
Artocarpus Hirsuta In Complex With Methyl-A-D-Galactose
pdb|1TP8|C Chain C, Crystal Structure Of A Galactose Specific Lectin From
Artocarpus Hirsuta In Complex With Methyl-A-D-Galactose
pdb|1TP8|E Chain E, Crystal Structure Of A Galactose Specific Lectin From
Artocarpus Hirsuta In Complex With Methyl-A-D-Galactose
pdb|1TP8|G Chain G, Crystal Structure Of A Galactose Specific Lectin From
Artocarpus Hirsuta In Complex With Methyl-A-D-Galactose
Length = 133
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 24 GARWDDGVFSSVRQVVISYG--AGIDSILIEYDKKGSSVWSDKHGGR-GGFKTNKVKFNY 80
G +DDG F+ +R++ +SY I + YD GS H GF K+ ++
Sbjct: 1 GKAFDDGAFTGIREINLSYNKETAIGDFQVVYDLNGSPYVGQNHSSFISGFTPVKISLDF 60
Query: 81 PEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHG 140
P E++ V V+VRSL F++NK+ YGP+G+ GT F+LP+ G+I GF G
Sbjct: 61 PSEYITEVSGYTGNVSGY--VVVRSLTFKTNKKTYGPYGVTSGTPFNLPIENGLIVGFKG 118
Query: 141 RSSWFLESIGVHL 153
++++ ++L
Sbjct: 119 SIGYWMDYFSMYL 131
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFS---NNGIIAGL 256
E + SGY+G+ + VV+S+TF TN++ +GP G G F+ NG+I G
Sbjct: 63 EYITEVSGYTGNV----SGYVVVRSLTFKTNKKTYGPYGV--TSGTPFNLPIENGLIVGF 116
Query: 257 PARKGRFID 265
G ++D
Sbjct: 117 KGSIGYWMD 125
>pdb|1UGW|A Chain A, Crystal Structure Of Jacalin- Gal Complex
pdb|1UGW|G Chain G, Crystal Structure Of Jacalin- Gal Complex
pdb|1UGX|A Chain A, Crystal Structure Of Jacalin- Me-Alpha-T-Antigen
(Gal-Beta(1-3)- Galnac-Alpha-O-Me) Complex
pdb|1UGY|A Chain A, Crystal Structure Of Jacalin- Mellibiose (Gal-Alpha(1-6)-
Glc) Complex
pdb|1UGY|G Chain G, Crystal Structure Of Jacalin- Mellibiose (Gal-Alpha(1-6)-
Glc) Complex
pdb|1WS4|A Chain A, Crystal Structure Of Jacalin- Me-alpha-mannose Complex:
Promiscuity Vs Specificity
pdb|1WS4|G Chain G, Crystal Structure Of Jacalin- Me-alpha-mannose Complex:
Promiscuity Vs Specificity
pdb|1WS5|A Chain A, Crystal Structure Of Jacalin-Me-Alpha-Mannose Complex:
Promiscuity Vs Specificity
pdb|1WS5|G Chain G, Crystal Structure Of Jacalin-Me-Alpha-Mannose Complex:
Promiscuity Vs Specificity
Length = 133
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 24 GARWDDGVFSSVRQVVISYG--AGIDSILIEYDKKGSSVWSDKHGGR-GGFKTNKVKFNY 80
G +DDG F+ +R++ +SY I + YD GS H GF K+ ++
Sbjct: 1 GKAFDDGAFTGIREINLSYNKETAIGDFQVVYDLNGSPYVGQNHVSFITGFTPVKISLDF 60
Query: 81 PEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGGMIAGFHG 140
P E+++ V V+VRSL F++NK+ YGP+G+ GT F+LP+ G+I GF G
Sbjct: 61 PSEYIMEVSGYTGNVSGY--VVVRSLTFKTNKKTYGPYGVTSGTPFNLPIENGLIVGFKG 118
Query: 141 RSSWFLESIGVHL 153
++L+ ++L
Sbjct: 119 SIGYWLDYFSMYL 131
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 200 EILIHKSGYSGSAILRGTTTTVVKSVTFLTNRRMHGPSGAGDEQGIFFS---NNGIIAGL 256
E ++ SGY+G+ + VV+S+TF TN++ +GP G G F+ NG+I G
Sbjct: 63 EYIMEVSGYTGNV----SGYVVVRSLTFKTNKKTYGPYGV--TSGTPFNLPIENGLIVGF 116
Query: 257 PARKGRFID 265
G ++D
Sbjct: 117 KGSIGYWLD 125
>pdb|2BMY|A Chain A, Banana Lectin
pdb|2BMY|B Chain B, Banana Lectin
pdb|2BMZ|A Chain A, Banana Lectin Bound To Xyl-B1,3 Man-A-O-Methyl (Xm)
pdb|2BMZ|B Chain B, Banana Lectin Bound To Xyl-B1,3 Man-A-O-Methyl (Xm)
pdb|2BN0|A Chain A, Banana Lectin Bound To Laminaribiose
pdb|2BN0|B Chain B, Banana Lectin Bound To Laminaribiose
Length = 141
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKT 73
+ VG WGG G+ +D G + V I G +D + + + G + + +GG GG
Sbjct: 5 IKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDGVDVTFTYYGKT-ETRHYGGSGGTPH 63
Query: 74 NKVKFNYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGG 133
V E+LV + V++ L F +NK+ YGPFG GT FSLP+A G
Sbjct: 64 EIVL--QEGEYLVGMAGEVANYHG--AVVLGKLGFSTNKKAYGPFGNTGGTPFSLPIAAG 119
Query: 134 MIAGFHGRSSWFLESIGVHLKP 155
I+GF GR FL++IGV+L+P
Sbjct: 120 KISGFFGRGGKFLDAIGVYLEP 141
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 219 TTVVKSVTFLTNRRMHGPSGAGDEQGIFFS---NNGIIAGLPARKGRFIDSIGPHF 271
V+ + F TN++ +GP G + G FS G I+G R G+F+D+IG +
Sbjct: 86 AVVLGKLGFSTNKKAYGPFG--NTGGTPFSLPIAAGKISGFFGRGGKFLDAIGVYL 139
>pdb|1X1V|A Chain A, Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex
pdb|1X1V|B Chain B, Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex
pdb|3MIT|A Chain A, Structure Of Banana Lectin-Alpha-D-Mannose Complex
pdb|3MIT|B Chain B, Structure Of Banana Lectin-Alpha-D-Mannose Complex
pdb|3MIU|A Chain A, Structure Of Banana Lectin-Pentamannose Complex
pdb|3MIU|B Chain B, Structure Of Banana Lectin-Pentamannose Complex
pdb|3MIV|A Chain A, Structure Of Banana Lectin - Glc-Alpha(1,2)-Glc Complex
pdb|3MIV|B Chain B, Structure Of Banana Lectin - Glc-Alpha(1,2)-Glc Complex
Length = 141
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 14 VTVGPWGGQNGARWDDGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKT 73
+ VG WGG G+ +D G + V I G +D++ + + G + +H G G
Sbjct: 5 IKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDAVDVTFTYYGKT--ETRHFGGSGGTP 62
Query: 74 NKVKFNYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLPMAGG 133
+++ E+LV + V+V L F +NK+ YGPFG GT FSLP+A G
Sbjct: 63 HEIVLQ-EGEYLVGMKGEFGNYHGV--VVVGKLGFSTNKKSYGPFGNTGGTPFSLPIAAG 119
Query: 134 MIAGFHGRSSWFLESIGVHLKP 155
I+GF GR F+++IGV+L+P
Sbjct: 120 KISGFFGRGGDFIDAIGVYLEP 141
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 219 TTVVKSVTFLTNRRMHGPSGAGDEQGIFFS---NNGIIAGLPARKGRFIDSIGPHF 271
VV + F TN++ +GP G+ G FS G I+G R G FID+IG +
Sbjct: 86 VVVVGKLGFSTNKKSYGP--FGNTGGTPFSLPIAAGKISGFFGRGGDFIDAIGVYL 139
>pdb|1C3K|A Chain A, Crystal Structure Of Helianthus Tuberosus Lectin
pdb|1C3M|A Chain A, Crystal Structure Of Heltuba Complexed To Man(1-3)man
pdb|1C3N|A Chain A, Crystal Structure Of Helianthus Tuberosus Lectin Complexed
To Man(1- 2)man
Length = 147
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 11 DDHVTVGPWGGQNGARWDDGVFSS-VRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRG 69
D V GPWGG G RW + ++I G I SI Y K + + G
Sbjct: 5 DIAVQAGPWGGNGGKRWLQTAHGGKITSIIIKGGTCIFSIQFVYKDKDNIEYHSGKFGVL 64
Query: 70 GFKTNKVKFNYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHFSLP 129
G K + F E+ +V SL F++NK+ YGPFG + FSLP
Sbjct: 65 GDKAETITFAEDEDI---TAISGTFGAYYHMTVVTSLTFQTNKKVYGPFGTVASSSFSLP 121
Query: 130 MAGGMIAGFHGRSSWFLESIGVHLKP 155
+ G AGF G S L+SIG + P
Sbjct: 122 LTKGKFAGFFGNSGDVLDSIGGVVVP 147
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 220 TVVKSVTFLTNRRMHGPSGAGDEQGIFFS---NNGIIAGLPARKGRFIDSIG 268
TVV S+TF TN++++GP G FS G AG G +DSIG
Sbjct: 93 TVVTSLTFQTNKKVYGPFGTVASSS--FSLPLTKGKFAGFFGNSGDVLDSIG 142
>pdb|1OUW|A Chain A, Crystal Structure Of Calystegia Sepium Agglutinin
pdb|1OUW|B Chain B, Crystal Structure Of Calystegia Sepium Agglutinin
pdb|1OUW|C Chain C, Crystal Structure Of Calystegia Sepium Agglutinin
pdb|1OUW|D Chain D, Crystal Structure Of Calystegia Sepium Agglutinin
Length = 152
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 17 GPWGGQNGARWDDGVFSSVRQVVISYGAGIDS-ILIEYDKKGSSVWSDK----HGGRGGF 71
GPWG G W + + Q+VISYG G ++ I + + + D GG
Sbjct: 9 GPWGNNGGNFWSFRPVNKINQIVISYGGGGNNPIALTFSSTKADGSKDTITVGGGGPDSI 68
Query: 72 KTNKVKFNYPEEFLVSVXXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHF-SLPM 130
++ +E+L + ++RS+ F +N + +GP+G + GT F S +
Sbjct: 69 TGTEMVNIGTDEYLTGISGTFGIYLDNN--VLRSITFTTNLKAHGPYGQKVGTPFSSANV 126
Query: 131 AGGMIAGFHGRSSWFLESIGVH 152
G I GF GRS +++++IG +
Sbjct: 127 VGNEIVGFLGRSGYYVDAIGTY 148
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 221 VVKSVTFLTNRRMHGPSGAGDEQGIFFSNNGI----IAGLPARKGRFIDSIGPH 270
V++S+TF TN + HGP G + G FS+ + I G R G ++D+IG +
Sbjct: 97 VLRSITFTTNLKAHGP--YGQKVGTPFSSANVVGNEIVGFLGRSGYYVDAIGTY 148
>pdb|3R50|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R50|B Chain B, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R50|C Chain C, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R50|D Chain D, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R50|E Chain E, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R51|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R51|B Chain B, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R52|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R52|B Chain B, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R52|C Chain C, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R52|D Chain D, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|4DDN|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|4DDN|B Chain B, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|4DDN|C Chain C, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|4DDN|D Chain D, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
Length = 160
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 102 LVRSLVFESNKRKYGPFGLQQGTHFSLPMA-GGMIAGFHGRSSWFLESIGVH 152
++RS+ F +NK++YGP+G GT F++ + G I GF G S W++++IG +
Sbjct: 105 VIRSIKFTTNKKEYGPYGANAGTPFNIKIPDGNKIVGFFGNSGWYVDAIGAY 156
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 221 VVKSVTFLTNRRMHGPSG--AGDEQGIFFSNNGIIAGLPARKGRFIDSIGPHFIEE 274
V++S+ F TN++ +GP G AG I + I G G ++D+IG ++ +
Sbjct: 105 VIRSIKFTTNKKEYGPYGANAGTPFNIKIPDGNKIVGFFGNSGWYVDAIGAYYTAK 160
>pdb|3APA|A Chain A, Crystal Structure Of Human Pancreatic Secretory Protein
Zg16p
Length = 141
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 29 DGVFSSVRQVVISYGAGIDSILIEYDKKGSSVWSDKHGGRGGFKTNKVKFNYPEEFLVSV 88
DG +++R V +Y I + + Y K VWSD GGR G + F +P E ++ V
Sbjct: 28 DGPITALRVRVNTYY--IVGLQVRYGK----VWSDYVGGRNG--DLEEIFLHPGESVIQV 79
Query: 89 XXXXXXXXXXXPVLVRSLVFESNKRKYGPFGLQQGTHF-SLPMAGGMIAGF-HGRSSWFL 146
++ LVF ++K +Y FG GT F ++P+ + F GRS +
Sbjct: 80 SGKYKW-------YLKKLVFVTDKGRYLSFGKDSGTSFNAVPLHPNTVLRFISGRSGSLI 132
Query: 147 ESIGVH 152
++IG+H
Sbjct: 133 DAIGLH 138
>pdb|1WY5|A Chain A, Crystal Structure Of Isoluecyl-Trna Lysidine Synthetase
pdb|1WY5|B Chain B, Crystal Structure Of Isoluecyl-Trna Lysidine Synthetase
pdb|2E21|A Chain A, Crystal Structure Of Tils In A Complex With Amppnp From
Aquifex Aeolicus.
pdb|2E21|B Chain B, Crystal Structure Of Tils In A Complex With Amppnp From
Aquifex Aeolicus.
pdb|2E21|C Chain C, Crystal Structure Of Tils In A Complex With Amppnp From
Aquifex Aeolicus.
pdb|2E21|D Chain D, Crystal Structure Of Tils In A Complex With Amppnp From
Aquifex Aeolicus.
pdb|2E89|A Chain A, Crystal Structure Of Aquifex Aeolicus Tils In A Complex
With Atp, Magnesium Ion, And L-Lysine
pdb|2E89|C Chain C, Crystal Structure Of Aquifex Aeolicus Tils In A Complex
With Atp, Magnesium Ion, And L-Lysine
pdb|2E89|D Chain D, Crystal Structure Of Aquifex Aeolicus Tils In A Complex
With Atp, Magnesium Ion, And L-Lysine
pdb|2E89|B Chain B, Crystal Structure Of Aquifex Aeolicus Tils In A Complex
With Atp, Magnesium Ion, And L-Lysine
Length = 317
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 28 DDGVFSSVRQVVISYGAGIDSILI 51
D+ +FS R+V+I++ G+DS+++
Sbjct: 17 DEKIFSGERRVLIAFSGGVDSVVL 40
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,466,146
Number of Sequences: 62578
Number of extensions: 438401
Number of successful extensions: 910
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 824
Number of HSP's gapped (non-prelim): 52
length of query: 328
length of database: 14,973,337
effective HSP length: 99
effective length of query: 229
effective length of database: 8,778,115
effective search space: 2010188335
effective search space used: 2010188335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)