BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020284
(328 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/322 (62%), Positives = 244/322 (75%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 227
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 228 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 287
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 288 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 347
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 348 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 408 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 467
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G Y L Y +VK V +
Sbjct: 468 GRELGEYGLQAYTEVKTVTVKV 489
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/318 (62%), Positives = 243/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/318 (62%), Positives = 242/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AF GST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/318 (62%), Positives = 243/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNYLQVKAV 318
G+E G Y L Y +VK V
Sbjct: 474 GQELGEYGLQAYTEVKTV 491
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 413 bits (1061), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/318 (62%), Positives = 242/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQC CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/318 (62%), Positives = 242/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQC CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/322 (59%), Positives = 245/322 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MF WK+GPAL+CGNT+V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++
Sbjct: 175 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 234
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK+AFTGST GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH
Sbjct: 235 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG 294
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F++QGQCC A SR FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKI
Sbjct: 295 VFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKI 354
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L I SG GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K L
Sbjct: 355 LDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
D+VI+R+N + YGL+AG+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG
Sbjct: 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGN 474
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G Y Y +VK V +
Sbjct: 475 GRELGEYGFHEYTEVKTVTIKI 496
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/318 (61%), Positives = 244/318 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+A
Sbjct: 173 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIA 232
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G ++ A KSNLK VTLE+GGKSP I+ DAD+D A E AH+A
Sbjct: 233 SHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFA 292
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+
Sbjct: 293 LFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKV 352
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI+SG + G KL GG +GY+I+PTVF ++D M IAK+EIFGPV ILK+K +
Sbjct: 353 LGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSM 412
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 413 EEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGS 472
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 473 GRELGEYGLQAYTEVKTV 490
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/312 (63%), Positives = 239/312 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNY 312
GRE G Y L Y
Sbjct: 474 GRELGEYGLQAY 485
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 247/322 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
MF WK+ PAL CGNT+V+K AEQTPLSALY+ L+ EAG PPGV+NI+ GYGPTAGAA+A
Sbjct: 173 MFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIA 232
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH+ +DK+AFTGST GK++ + A +SNLK VTLELGGKSP I+ DAD+D A E AH
Sbjct: 233 SHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQG 292
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFNQGQCC AGSR FV ES+Y++FV+++ A +R+VG PF +QGPQID +Q+ KI
Sbjct: 293 VFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKI 352
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L+ I+SGV GAKLE GG+ LG KG++I+PTVF+ V DDM IAK+EIFGPVQ IL++K +
Sbjct: 353 LELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTM 412
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N S +GL A VFT++++ A + A++ G+VWINC++ +A PFGG+K SG
Sbjct: 413 DEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGN 472
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G + L Y +VK V +
Sbjct: 473 GREMGEFGLREYSEVKTVTVKI 494
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/318 (61%), Positives = 241/318 (75%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTL+LGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQ C AGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE G Y L Y +VK V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/312 (62%), Positives = 238/312 (76%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+A
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+A
Sbjct: 234 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
LFFNQGQC CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KI
Sbjct: 294 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K +
Sbjct: 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG
Sbjct: 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGS 473
Query: 301 GREKGSYSLSNY 312
GRE G Y L Y
Sbjct: 474 GRELGEYGLQAY 485
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 387 bits (994), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 236/322 (73%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+GPAL CGNT+++K AEQTPL+AL+V+ L+ EAG PPGV+NIV GYGPTAGAA++
Sbjct: 175 LLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAIS 234
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SHM+VDK+AFTGST GK++ + AAKSNLK VTLELG K+P IV DAD+D A E AH
Sbjct: 235 SHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQG 294
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+F NQGQ C A S+ FV E++YD+FV+++ A K V G+P G+ GPQI+ Q KI
Sbjct: 295 VFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKI 354
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
++ I SG GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K L
Sbjct: 355 MELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSL 414
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEVI+R+N + YGL AGVFT +LD A T+ AL+ G+VW+NC+ A P GG+K SG
Sbjct: 415 DEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGH 474
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE G Y + Y +VK V +
Sbjct: 475 GREMGEYGIHEYTEVKTVTMKI 496
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 293 bits (749), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 204/329 (62%), Gaps = 3/329 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WK+ PALA G T VLK +E ++ L ++ +E GLPPGVLNI++G GP AGA L
Sbjct: 164 MATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLV 223
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK+AFTGS+ TG V+ AA+ +KPVTLELGGKSP +V ED D+DK E +
Sbjct: 224 SHPDVDKIAFTGSSATGSKVMASAAQL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFG 282
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F+ GQ C A SR VHES+ +FV+K + DPF+ G + GP I Q++KI
Sbjct: 283 CFWTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKI 342
Query: 181 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
+K+I + GA + GG R KGYYI+PT+ T + M I K+E+FGPV + +
Sbjct: 343 MKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFS 402
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
DE I +N ++YGLAA VF+++L+ + +AL VG+VW+NC P+GG K+S
Sbjct: 403 SEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRS 462
Query: 299 GQGREKGSYSLSNYLQVKAVVTALKNPAW 327
G GRE G + + NYL +K V + + W
Sbjct: 463 GFGRELGEWGIQNYLNIKQVTQDISDEPW 491
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/323 (46%), Positives = 205/323 (63%), Gaps = 4/323 (1%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK PALA GN ++ K +E TPL+AL ++++ EAG+P GV N+++G G G L H
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 220
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++K++FTG T+TGK V+ A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF
Sbjct: 221 LIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 280
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ C G+R F+H S +F K + +GDP GP + E +L Y
Sbjct: 281 SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 340
Query: 184 IRSGVDGGAKLETGGERL--GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
I SG A+L GGER+ GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D
Sbjct: 341 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
DE I+R+N ++YGLAAGV T +L A+ + L G WIN + A +P GGYKQSG
Sbjct: 401 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 460
Query: 300 QGREKGSYSLSNYLQVKAVVTAL 322
GRE G +L++Y ++K+V L
Sbjct: 461 VGRENGLTTLAHYTRIKSVQVEL 483
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/323 (46%), Positives = 205/323 (63%), Gaps = 4/323 (1%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK PALA GN ++ K +E TPL+AL ++++ EAG+P GV N+++G G G L H
Sbjct: 160 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 219
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++K++FTG T+TGK V+ A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF
Sbjct: 220 LIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 279
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ C G+R F+H S +F K + +GDP GP + E +L Y
Sbjct: 280 SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 339
Query: 184 IRSGVDGGAKLETGGERL--GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
I SG A+L GGER+ GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D
Sbjct: 340 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 399
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
DE I+R+N ++YGLAAGV T +L A+ + L G WIN + A +P GGYKQSG
Sbjct: 400 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 459
Query: 300 QGREKGSYSLSNYLQVKAVVTAL 322
GRE G +L++Y ++K+V L
Sbjct: 460 VGRENGLTTLAHYTRIKSVQVEL 482
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 287 bits (734), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 204/323 (63%), Gaps = 4/323 (1%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK PALA GN ++ K +E TPL+AL ++++ EAG+P GV N+++G G G L H
Sbjct: 160 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 219
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++K++FTG T+TGK V+ A+ S+LK VT+ LGGKSP I+ DAD+D+AA++A A FF
Sbjct: 220 LIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFF 279
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ C G+R F+H S +F K + +GDP GP + E +L Y
Sbjct: 280 SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 339
Query: 184 IRSGVDGGAKLETGGERL--GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
I SG A+L GGER+ GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D
Sbjct: 340 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 399
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
DE I+R+N ++YGLAAGV T +L A+ + L G WIN + A +P GGYKQSG
Sbjct: 400 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 459
Query: 300 QGREKGSYSLSNYLQVKAVVTAL 322
GRE G +L++Y ++K+V L
Sbjct: 460 VGRENGLTTLAHYTRIKSVQVEL 482
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 204/323 (63%), Gaps = 4/323 (1%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK PALA GN ++ K +E TPL+AL ++++ EAG+P GV N+++G G G L H
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 220
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++K++FTG T+TGK V+ A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF
Sbjct: 221 LIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 280
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ G+R F+H S +F K + +GDP GP + E +L Y
Sbjct: 281 SSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 340
Query: 184 IRSGVDGGAKLETGGERL--GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
I SG A+L GGER+ GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D
Sbjct: 341 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
DE I+R+N ++YGLAAGV T +L A+ + L G WIN + A +P GGYKQSG
Sbjct: 401 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 460
Query: 300 QGREKGSYSLSNYLQVKAVVTAL 322
GRE G +L++Y ++K+V L
Sbjct: 461 VGRENGLTTLAHYTRIKSVQVEL 483
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 211/320 (65%), Gaps = 2/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G L+
Sbjct: 194 MLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLS 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++ +
Sbjct: 254 DHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN+G+ C A R FV ES+++QFV+K K +G+P + GPQ K+
Sbjct: 314 VFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKL 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 238
++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+KQS
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G++ G +L+ YL++K V
Sbjct: 494 GFGKDLGEAALNEYLRIKTV 513
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 204/323 (63%), Gaps = 4/323 (1%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK PALA GN ++ K +E TPL+AL ++++ EAG+P GV N+++G G G L H
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP 220
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++K++FTG T+TGK V+ A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF
Sbjct: 221 LIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 280
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ G+R F+H S +F K + +GDP GP + E +L Y
Sbjct: 281 SSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGY 340
Query: 184 IRSGVDGGAKLETGGERL--GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
I SG A+L GGER+ GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D
Sbjct: 341 IESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
DE I+R+N ++YGLAAGV T +L A+ + L G WIN + A +P GGYKQSG
Sbjct: 401 EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSG 460
Query: 300 QGREKGSYSLSNYLQVKAVVTAL 322
GRE G +L++Y ++K+V L
Sbjct: 461 VGRENGLTTLAHYTRIKSVQVEL 483
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 284 bits (726), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 211/320 (65%), Gaps = 2/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G L+
Sbjct: 194 MLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLS 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V K+ FTGST GK +++ A SN+K V+L+LGGKSP I+ D D++KA ++ +
Sbjct: 254 DHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN+G+ C A R FV ES+++QFV+K K +G+P + GPQ K+
Sbjct: 314 VFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKL 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 238
++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+KQS
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G++ G +L+ YL++K V
Sbjct: 494 GFGKDLGEAALNEYLRIKTV 513
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 283 bits (723), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 210/320 (65%), Gaps = 2/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G L+
Sbjct: 194 MLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLS 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V K+ FTGST GK +++ A SN+K V+L LGGKSP I+ D D++KA ++ +
Sbjct: 254 DHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN+G+ C A R FV ES+++QFV+K K +G+P + GPQ K+
Sbjct: 314 VFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKL 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 238
++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+KQS
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G++ G +L+ YL++K V
Sbjct: 494 GFGKDLGEAALNEYLRIKTV 513
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 281 bits (720), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 210/320 (65%), Gaps = 2/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G L+
Sbjct: 194 MLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLS 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++ +
Sbjct: 254 DHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN+G+ A R FV ES+++QFV+K K +G+P + GPQ K+
Sbjct: 314 VFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKL 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 238
++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+KQS
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G++ G +L+ YL++K V
Sbjct: 494 GFGKDLGEAALNEYLRIKTV 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 281 bits (719), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 210/320 (65%), Gaps = 2/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G L+
Sbjct: 194 MLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLS 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++ +
Sbjct: 254 DHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN+G+ A R FV ES+++QFV+K K +G+P + GPQ K+
Sbjct: 314 VFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKL 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 238
++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+KQS
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G++ G +L+ YL++K V
Sbjct: 494 GFGKDLGEAALNEYLRIKTV 513
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 209/320 (65%), Gaps = 2/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G L+
Sbjct: 194 MLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLS 253
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V K+ FTGST GK +++ A SN+K V+L LGGKSP I+ D D++KA ++ +
Sbjct: 254 DHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+FFN+G+ A R FV ES+++QFV+K K +G+P + GPQ K+
Sbjct: 314 VFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKL 373
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 238
++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+KQS
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G++ G +L+ YL++K V
Sbjct: 494 GFGKDLGEAALNEYLRIKTV 513
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 268 bits (685), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 195/329 (59%), Gaps = 3/329 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WK+ PALA G T VLK +E ++ L ++ + E GLP GVLNIV+G GP AGA L+
Sbjct: 184 MATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLS 243
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +VDK+AFTGS TGK ++ AA +KPVTLELGGKSP +V +D D+DKA E +
Sbjct: 244 AHPDVDKVAFTGSFETGKKIMASAAPM-VKPVTLELGGKSPIVVFDDVDIDKAVEWTLFG 302
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F+ GQ C A SR +H + +F E+ A A V DP + G + GP + Q+EKI
Sbjct: 303 CFWTNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKI 362
Query: 181 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
K+I + GA + TGG R KG++I+PT+ T + M I ++E+FGPV + ++
Sbjct: 363 KKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFS 422
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
DE I+ +N +QYGLA V + + + L + G +W+NC P+GG K+S
Sbjct: 423 TEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRS 482
Query: 299 GQGREKGSYSLSNYLQVKAVVTALKNPAW 327
G GRE G + NYL VK V + + W
Sbjct: 483 GFGRELGEGGIDNYLSVKQVTEYISDEPW 511
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 268 bits (685), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 196/318 (61%), Gaps = 5/318 (1%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
WK PAL GN +V K +E TPL AL ++++L EAGLP G+ N++ G T G L +H
Sbjct: 169 WKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHP 227
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
+V K++ TGS TG+ V AA +LK VT+ELGGKSP IV +DAD++ A A F+
Sbjct: 228 DVAKVSLTGSVPTGRKVAA-AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFY 286
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ GQ C G+R FV + +F+E ++GDP GP + Q EK+L Y
Sbjct: 287 SSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSY 346
Query: 184 IRSGVDGGAKLETGG---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
I G GA L TGG + +G Y++PTVF V DDM IA++EIFGPV +L + D
Sbjct: 347 IEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDE 406
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
DEV+ R+NA+++GLA GVFT +L A+ ++ L G++WIN +++ IPFGG KQSG
Sbjct: 407 DEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGF 466
Query: 301 GREKGSYSLSNYLQVKAV 318
GRE + +L +Y ++K V
Sbjct: 467 GRENSAAALEHYSELKTV 484
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 201/329 (61%), Gaps = 3/329 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WKV PALA G +LK +E L+ L + ++ E GLPPGVLNI++G GP AGA LA
Sbjct: 167 MATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLA 226
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+H +VDK+AFTGS+ TG ++ AA+ +KPV+LELGGKSP +V ED D+DKAAE A +
Sbjct: 227 THPDVDKVAFTGSSATGSKIMTAAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFG 285
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F+ GQ C A SR +HES+ +F+ + + DP + G + GP + Q+EKI
Sbjct: 286 CFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKI 345
Query: 181 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
LK++ + GA + TGG R KG++I+PT+ T V +M I ++E+FGPV + +
Sbjct: 346 LKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFS 405
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
+E I +N + YGL A V +++L+ + +A + G VW+NC P+GG K+S
Sbjct: 406 TEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRS 465
Query: 299 GQGREKGSYSLSNYLQVKAVVTALKNPAW 327
G GRE G + L NYL VK V + W
Sbjct: 466 GFGRELGEWGLDNYLSVKQVTQYISEEPW 494
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 199/329 (60%), Gaps = 3/329 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WK+ PALA G +LK +E ++ L + ++ E GLP GVLNIV+G G AGA+LA
Sbjct: 167 MATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLA 226
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
SH +VDK++FTGS+ TG ++ AA+ +KPV+LELGGKSP +V ED D+DK AE +
Sbjct: 227 SHPDVDKISFTGSSATGSKIMTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFG 285
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
FF GQ C A SR VHES+ +FV+K A + DP + G + GP + Q++K+
Sbjct: 286 CFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKV 345
Query: 181 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
L I S GA + TGG R KGY+++PT+ T V M I ++E+FGPV ++ +
Sbjct: 346 LNCISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFS 405
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
+E I +N + YGL + V +++L+ L +AL+ G VWINC P+GG K+S
Sbjct: 406 TEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRS 465
Query: 299 GQGREKGSYSLSNYLQVKAVVTALKNPAW 327
G GRE G + L NYL VK V + W
Sbjct: 466 GFGRELGEWGLENYLSVKQVTRYTSDEPW 494
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 261 bits (668), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 202/330 (61%), Gaps = 10/330 (3%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
W++ PALA GNT+VLK AE +P +A ++++L EA LPPGV N+V G+G AGAAL +H
Sbjct: 181 WRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHP 240
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
V L TG T TGKIV++ AA +LK ++ ELGGKSP +V DAD+++A + + +F
Sbjct: 241 LVPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFS 299
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
G+ C A SR V E +++ FV K A VG P + GP I E +++L Y
Sbjct: 300 FNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGY 359
Query: 184 IRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
+ +G GA+L GGER ++G Y+ PTVF G ++ M IA++EIFGPV +
Sbjct: 360 VEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAI 418
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGY 295
+KD +E ++++N ++YGLAA VFT +L+ A+ L L G V++N +V PFGG
Sbjct: 419 PFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGV 478
Query: 296 KQSGQGREKGSYSLSNYLQVKAVVTALKNP 325
K SG RE G+Y+L Y +K + L+ P
Sbjct: 479 KGSGDRREGGTYALDFYTDLKTIALPLRPP 508
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 261 bits (666), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 196/326 (60%), Gaps = 8/326 (2%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
AWK PALACGN +V K + TP++ + ++++ HEAG+P G++N+V G G G+ L H
Sbjct: 173 AWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHH 231
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
V K++FTGS TGK V++++AK+ +K VTLELGGKSP ++ +D +++ A A A F
Sbjct: 232 PNVAKVSFTGSVPTGKKVMEMSAKT-VKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
QGQ C G+R FV + QF+E+ VVGDP + G I Q +K+L
Sbjct: 291 LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLG 350
Query: 183 YIRSGVDGGAKLETGGERLGA------KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
++ GA++ GGE L GY++ P V +DDM K+EIFGPV S+L
Sbjct: 351 FVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLP 410
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 296
+ +EV+QR+N + +GLA+GVFT ++ A+ + L G+ +IN + + +PFGGYK
Sbjct: 411 FDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYK 470
Query: 297 QSGQGREKGSYSLSNYLQVKAVVTAL 322
SG GRE G ++ Y Q+K V+ +
Sbjct: 471 MSGFGRENGQATVDYYSQLKTVIVEM 496
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 193/323 (59%), Gaps = 2/323 (0%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
+V A+ G T+VLK +E T +++ +++L EAG+P GV N+V+GYG AG LA
Sbjct: 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPN 240
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
VD +AFTGS G + ++AA++ +K V LELGGK P IV DAD+D AA+ Y ++ N
Sbjct: 241 VDXVAFTGSVRVGTKLGEIAART-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHN 299
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQCC +GSR V E + D E+ ++ K GDP + G I EK+ Y+
Sbjct: 300 AGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYV 359
Query: 185 RSGVDGGAKLETGGERLGAK-GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+G+ GA+L GGER+G + G Y PTVF GV D IA++EIFGPV S L +K DE
Sbjct: 360 TAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEA 419
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 303
+ +NA+++GL+A V++ NL+TA +R +R G WIN +P GGYK+SG GRE
Sbjct: 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRE 479
Query: 304 KGSYSLSNYLQVKAVVTALKNPA 326
G Y Y Q K V L PA
Sbjct: 480 LGRYGFDEYSQFKGVHVTLGRPA 502
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 240 bits (613), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 198/325 (60%), Gaps = 7/325 (2%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
+ K+ A A G+ +VLK +E+TP +A+ ++++ + G+P GV N+V+G G G L+ H
Sbjct: 157 SLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEH 216
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
+V +FTGS TG + + AAK + K V+LELGGKSP+IV +D D+ +AA+ +
Sbjct: 217 PKVRXXSFTGSGPTGSKIXEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV 275
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
N GQ C AG+R V + D F+ + + VG+P + G Q GP I +QF+++
Sbjct: 276 NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQN 335
Query: 183 YIRSGVDGGAKLETGG----ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
YI G++ GA+L GG E L KGY+ +PT+F V + IA++EIFGPV S++ Y
Sbjct: 336 YINKGIEEGAELFYGGPGKPEGL-EKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYN 394
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 298
DLDE IQ +N ++YGLA V + +T + + R++ G+V IN +PFGGYKQS
Sbjct: 395 DLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAG-RKPDLPFGGYKQS 453
Query: 299 GQGREKGSYSLSNYLQVKAVVTALK 323
G GRE G Y + +L+VK++ K
Sbjct: 454 GLGREWGDYGIEEFLEVKSIAGYFK 478
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 192/322 (59%), Gaps = 4/322 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WKV PALA G +LK +E ++ L + ++ E GLP G LNI++G GP AG LA
Sbjct: 180 MAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLA 239
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHY 119
SH VDK++FTGS TG ++ AA+ +KPV+LELGGKSP +V +D D +D AAE +
Sbjct: 240 SHPHVDKISFTGSGPTGSKIMTAAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLF 298
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
+F N GQ C A SR V E++ F+++ + DP + + GP + + Q+EK
Sbjct: 299 GIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEK 358
Query: 180 ILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
+LK+I + GA + GGER KGYY++PT+ T V M I K+E+FGPV + +
Sbjct: 359 VLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTF 418
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 297
K ++ I+ +N ++YGL A V + ++ +A + G +WINC +P+GG K+
Sbjct: 419 KTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKR 478
Query: 298 SGQGREKGSYSLSNYLQVKAVV 319
SG GR+ G + L N+L +K V
Sbjct: 479 SGFGRDLGKWGLENFLNIKQVT 500
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 193/322 (59%), Gaps = 1/322 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M A KVGPALA G IV+K AE TP SAL ++ L AG+P GVL++V G G +
Sbjct: 164 MIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEIT 223
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ V KL+FTGST G++++ +A + +K +TLELGG +PFIV +DAD+D A E A +
Sbjct: 224 SNPIVRKLSFTGSTAVGRLLMAQSAPT-VKKLTLELGGNAPFIVFDDADLDAAVEGAIAS 282
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ N GQ C +R FVHE VYD F +K A K VG + G GP I+ +K+
Sbjct: 283 KYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKV 342
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+I + GA L TGG+R + +PTV TGVK DM +AK+E FGP+ + ++
Sbjct: 343 ESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASE 402
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+E+++ +N +++GLAA +++ ++ + AL G V IN + + PFGG KQSG
Sbjct: 403 EELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGL 462
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE Y + +Y+ +K + A+
Sbjct: 463 GREGSHYGIDDYVVIKYLCVAV 484
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 191/322 (59%), Gaps = 4/322 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M WKV PALA G +LK +E ++ L + ++ E GLP G LNI++G GP AG LA
Sbjct: 180 MAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLA 239
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHY 119
SH VDK++FTGS TG ++ AA+ +KPV+L LGGKSP +V +D D +D AAE +
Sbjct: 240 SHPHVDKISFTGSGPTGSKIMTAAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLF 298
Query: 120 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 179
+F N GQ C A SR V E++ F+++ + DP + + GP + + Q+EK
Sbjct: 299 GIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEK 358
Query: 180 ILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
+LK+I + GA + GGER KGYY++PT+ T V M I K+E+FGPV + +
Sbjct: 359 VLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTF 418
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 297
K ++ I+ +N ++YGL A V + ++ +A + G +WINC +P+GG K+
Sbjct: 419 KTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKR 478
Query: 298 SGQGREKGSYSLSNYLQVKAVV 319
SG GR+ G + L N+L +K V
Sbjct: 479 SGFGRDLGKWGLENFLNIKQVT 500
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 190/322 (59%), Gaps = 1/322 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M K GPALA G T+VLK A QTP SAL +++L AG+P GV N+V+G G L
Sbjct: 161 MITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELT 220
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ V KL+FTGST G+ +++ AK ++K V+LELGG +PFIV +DAD+DKA E A +
Sbjct: 221 SNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALAS 279
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C +R +V + VYD+F EK K +GD G+ GP ID + K+
Sbjct: 280 KFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKV 339
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
++I ++ GA++ GG+ G + +PT+ V + ++K+E FGP+ + ++KD
Sbjct: 340 EEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE 399
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+VI ++N +++GLAA + +L + AL G V IN + + PFGG K SG
Sbjct: 400 ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGL 459
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE Y + +YL++K + L
Sbjct: 460 GREGSKYGIEDYLEIKYMCIGL 481
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 190/322 (59%), Gaps = 1/322 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M K GPALA G T+VLK A QTP SAL +++L AG+P GV N+V+G G L
Sbjct: 161 MITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELT 220
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ V KL+FTGST G+ +++ AK ++K V+LELGG +PFIV +DAD+DKA E A +
Sbjct: 221 SNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALAS 279
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F N GQ C +R +V + VYD+F EK K +GD G+ GP ID + K+
Sbjct: 280 KFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKV 339
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
++I ++ GA++ GG+ G + +PT+ V + ++K+E FGP+ + ++KD
Sbjct: 340 EEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE 399
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+VI ++N +++GLAA + +L + AL G V IN + + PFGG K SG
Sbjct: 400 ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGL 459
Query: 301 GREKGSYSLSNYLQVKAVVTAL 322
GRE Y + +YL++K + L
Sbjct: 460 GREGSKYGIEDYLEIKYMCIGL 481
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 191/323 (59%), Gaps = 7/323 (2%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
+WK+ PALA G ++V+K +E TPL+ + V +L+ E G P G +N++ G G G ++ H
Sbjct: 188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGH 247
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
EVD ++FTG TGK +++ AA +N+ + LELGGK+P I+ +DAD + A + A +
Sbjct: 248 KEVDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY 306
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKGGIQQGPQIDSEQFEKIL 181
F+ GQ C AGSR V S+ D+F E+A +K++ +G+ F + GP I +E KI
Sbjct: 307 FHAGQVCSAGSRILVQNSIKDKF-EQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIE 365
Query: 182 KYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237
Y+ GA + GG+R G + +PTV T M I ++E+FGPV ++ +
Sbjct: 366 SYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGF 425
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 297
+ E IQ +N S YGLA VF+ ++ A + L++G+VWIN F + A P+GGYKQ
Sbjct: 426 ETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQ 485
Query: 298 SGQGREKGSYSLSNYLQVKAVVT 320
SG GRE G L YL K ++T
Sbjct: 486 SGIGRELGKEGLEEYLVSKHILT 508
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 191/324 (58%), Gaps = 3/324 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M K PALA G T++++ A+ TPL+AL + L +AG+P GVL IV+G GA L
Sbjct: 184 MITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELT 243
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
S+ V KL+FTGST G++++ A + +K ++LELGG +PFIV +DAD+D A + A +
Sbjct: 244 SNDTVRKLSFTGSTEVGRLLMAQCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVS 302
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ N GQ C +R +V VYD+F EK A + VG+ + G+ GP I+ + K+
Sbjct: 303 KYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKV 362
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+I V GAKL TGG+ LG G + +P + TGV DML+AK+E FGP+ + +
Sbjct: 363 KAHIEDAVSKGAKLITGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTE 420
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
+EVI ++N + +GLAA +T N A + AL G V N + + PFGG KQSG
Sbjct: 421 EEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGL 480
Query: 301 GREKGSYSLSNYLQVKAVVTALKN 324
GRE Y + YL+ K + +A K
Sbjct: 481 GREGSKYGIEEYLETKYICSAYKR 504
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 176/318 (55%), Gaps = 5/318 (1%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
K+GPAL GNT+VLK ++TPL+ + ++ EAGLP GVLN+++G G G L
Sbjct: 168 KIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPI 227
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
+ TGST GK + + +A+ + PV LELGGK+P +V +DAD+DKAAE A + F N
Sbjct: 228 TKMITMTGSTVAGKQIYKTSAEY-MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFAN 286
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C R +VH SVYD+F+ K L VGDP Q GP+ + + + I +
Sbjct: 287 CGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIV 346
Query: 185 RSGVDGGAKLETGGERLGAKGY----YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
+ GA + TGG+ +G+ + +PTV VK D ++ +E FGP+ I+K +
Sbjct: 347 HEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSM 406
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 300
++ I+ N S YGL+A V T + N + L VG V+IN G+KQSG
Sbjct: 407 EQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGF 466
Query: 301 GREKGSYSLSNYLQVKAV 318
G E G + L YL+ K V
Sbjct: 467 GGEDGKFGLEQYLEKKTV 484
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 182/320 (56%), Gaps = 5/320 (1%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
K+ PAL G TIVLK A +TPL+A ++++ E GLP GVL++V G G G AL S+ +
Sbjct: 166 KIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPD 224
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
+D FTGS+ G+ V + AA+ LKP TLELGGKS I+ ED D+ A + ++ N
Sbjct: 225 IDMFTFTGSSAVGREVGRRAAEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMN 283
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C +R S YD+ V VG P Q GP I +Q ++ YI
Sbjct: 284 AGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYI 343
Query: 185 RSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
G++ GA+L GG R G++I+PTVF V + M IA++EIFGPV +I+ Y ++
Sbjct: 344 AKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEED 403
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 302
I +N S YGLA V+T ++ + + +R G+ IN + FD PFGGYK SG GR
Sbjct: 404 AIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGR 462
Query: 303 EKGSYSLSNYLQVKAVVTAL 322
E G + ++ Q K+V+ +
Sbjct: 463 ENGPEGVEHFTQQKSVLLPM 482
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/317 (39%), Positives = 189/317 (59%), Gaps = 6/317 (1%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
KV PAL G T+VLK +E PLSA+ +++L EA LP GV N+++G G G+ L++H +
Sbjct: 181 KVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPD 240
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
++ ++FTGST GK + + A+ + LK V LELGGK I+ DAD+D A + F+N
Sbjct: 241 LEMISFTGSTRAGKDISKNASNT-LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYN 298
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C A +R V +++YD+ ++ A +A K VG + G GP + EQ++KI I
Sbjct: 299 SGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLI 358
Query: 185 RSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241
+SG+D GA L TGG L +GYY++PTVF VK M I ++EIFGPV S+L + D
Sbjct: 359 QSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTED 418
Query: 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 301
E + +N ++YGL + + + + +R G V +N ++ + FGG K SG+
Sbjct: 419 EAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGSY-FGGVKFSGRA 477
Query: 302 REKGSYSLSNYLQVKAV 318
RE G + + +L KA+
Sbjct: 478 REGGLWGIKEFLDTKAI 494
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 214 bits (546), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 185/320 (57%), Gaps = 4/320 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV N+V G G T G LA
Sbjct: 158 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELA 217
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV +DAD++ A + +
Sbjct: 218 GNPKVAMVSMTGSVSAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDS 276
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEK 179
N GQ C R +V + +YDQFV + G+P + I GP I++ E+
Sbjct: 277 RVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALER 336
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ + + V+ GA++ GG+ + KGYY PT+ V+ +M I +E FGPV ++ +
Sbjct: 337 VEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT 396
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF-GGYKQS 298
L+E I +N S YGL + ++T NL+ A ++ L+ G +IN + F+A F G+++S
Sbjct: 397 LEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINR-ENFEAMQGFHAGWRKS 455
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G G + L YLQ + V
Sbjct: 456 GIGGADGKHGLHEYLQTQVV 475
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 185/320 (57%), Gaps = 4/320 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV N+V G G T G LA
Sbjct: 158 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELA 217
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV +DAD++ A + +
Sbjct: 218 GNPKVAMVSMTGSVSAGEKIMATAAK-NITKVXLELGGKAPAIVMDDADLELAVKAIVDS 276
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEK 179
N GQ C R +V + +YDQFV + G+P + I GP I++ E+
Sbjct: 277 RVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALER 336
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ + + V+ GA++ GG+ + KGYY PT+ V+ +M I +E FGPV ++ +
Sbjct: 337 VEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT 396
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF-GGYKQS 298
L++ I +N S YGL + ++T NL+ A ++ L+ G +IN + F+A F G+++S
Sbjct: 397 LEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINR-ENFEAMQGFHAGWRKS 455
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G G + L YLQ + V
Sbjct: 456 GIGGADGKHGLHEYLQTQVV 475
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 185/320 (57%), Gaps = 4/320 (1%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV N+V G G T G LA
Sbjct: 158 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELA 217
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV +DAD++ A + +
Sbjct: 218 GNPKVAMVSMTGSVSAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDS 276
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEK 179
N GQ C R +V + +YDQFV + G+P + I GP I++ E+
Sbjct: 277 RVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALER 336
Query: 180 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
+ + + V+ GA++ GG+ + KGYY PT+ V+ +M I +E FGPV ++ +
Sbjct: 337 VEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT 396
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF-GGYKQS 298
L++ I +N S YGL + ++T NL+ A ++ L+ G +IN + F+A F G+++S
Sbjct: 397 LEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINR-ENFEAMQGFHAGWRKS 455
Query: 299 GQGREKGSYSLSNYLQVKAV 318
G G G + L YLQ + V
Sbjct: 456 GIGGADGKHGLHEYLQTQVV 475
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 177/320 (55%), Gaps = 3/320 (0%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
M AWK+ PALA GN +VLK +E TPL+AL +++L + P GV+NI+ G G T G L
Sbjct: 175 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLT 233
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +V ++ TGS TG+ ++ A S++K +ELGGK+P IV +DAD++ E
Sbjct: 234 GHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTF 292
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
++N GQ C A R + + +YD VEK A G P + GP E++
Sbjct: 293 GYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERV 352
Query: 181 LKYIRSG-VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
K + G K+ TGGE+ GYY PT+ G D I + E+FGPV S+ + +
Sbjct: 353 GKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN 412
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
++V+ +N SQYGLA+ V+T ++ A+ + L+ G W+N + + +P GG K SG
Sbjct: 413 EEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSG 472
Query: 300 QGREKGSYSLSNYLQVKAVV 319
G++ Y L +Y V+ V+
Sbjct: 473 YGKDMSLYGLEDYTVVRHVM 492
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 206 bits (524), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 177/328 (53%), Gaps = 12/328 (3%)
Query: 2 FAWKVGPALA---CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 58
A VG A+A GNT+VLK A TP+ A ++L +AGLP GV+N V G G G
Sbjct: 186 LAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDY 245
Query: 59 LASHMEVDKLAFTGSTTTGKIVLQLAA-----KSNLKPVTLELGGKSPFIVCEDADVDKA 113
L H + + FTGS G + + AA +++LK V +E+GGK +V DAD+D A
Sbjct: 246 LVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLA 305
Query: 114 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 173
AE + F GQ C AGSR +H+ VYD+ +EK ALA VGDP GP ID
Sbjct: 306 AESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVID 365
Query: 174 SEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233
+ FEKI+ YI G G +L TGGE + G++I+PT+ + + +I ++EIFGPV +
Sbjct: 366 EKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVA 424
Query: 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI--NCFDVFDAAIP 291
K D D ++ +N ++YGL V T N R VG+++ NC P
Sbjct: 425 FSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHP 484
Query: 292 FGGYKQSGQGREKGSYS-LSNYLQVKAV 318
FGG+K SG + G L+ ++Q K V
Sbjct: 485 FGGFKMSGTDSKAGGPDYLALHMQAKTV 512
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 186/323 (57%), Gaps = 7/323 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTA---GA 57
M KVG ALA G T+V+K AE TP SAL +++L +AG+P GV N++ A G
Sbjct: 162 MITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE 221
Query: 58 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 117
A+ + V K++FTGSTTTGKI+L AA S +K V++ELGG +PFIV + A+VD+A A
Sbjct: 222 AICTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGA 280
Query: 118 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR--VVGDPFKGGIQQGPQIDSE 175
+ F N GQ C ++ V ++D FV KA A AMK+ VG+ F+ G QGP I+ +
Sbjct: 281 MASKFRNTGQTCVCSNQFLVQRGIHDAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEK 339
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
EK+ K + V GA + TGG+R + +PT+ V DML +E FGP+ ++
Sbjct: 340 AVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVI 399
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGY 295
K+ +E I +NA+ GLA ++ + + L VG V +N + PFGG
Sbjct: 400 KFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGV 459
Query: 296 KQSGQGREKGSYSLSNYLQVKAV 318
KQSG GRE Y + YL++K V
Sbjct: 460 KQSGLGREGSKYGIDEYLELKYV 482
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 185/323 (57%), Gaps = 7/323 (2%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTA---GA 57
M KVG ALA G T+V+K AE TP SAL +++L +AG+P GV N++ A G
Sbjct: 162 MITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE 221
Query: 58 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 117
A+ + V K++FTGSTTTGKI+L AA S +K V++ELGG +PFIV + A+VD+A A
Sbjct: 222 AICTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGA 280
Query: 118 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR--VVGDPFKGGIQQGPQIDSE 175
+ F N GQ ++ V ++D FV KA A AMK+ VG+ F+ G QGP I+ +
Sbjct: 281 MASKFRNTGQTAVCSNQFLVQRGIHDAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEK 339
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
EK+ K + V GA + TGG+R + +PT+ V DML +E FGP+ ++
Sbjct: 340 AVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVI 399
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGY 295
K+ +E I +NA+ GLA ++ + + L VG V +N + PFGG
Sbjct: 400 KFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGV 459
Query: 296 KQSGQGREKGSYSLSNYLQVKAV 318
KQSG GRE Y + YL++K V
Sbjct: 460 KQSGLGREGSKYGIDEYLELKYV 482
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 201 bits (511), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 176/329 (53%), Gaps = 12/329 (3%)
Query: 1 MFAWKVGPALA---CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGA 57
+FA G +A GNT+VLK A P+ A ++L E+GLP GV+N V G G G
Sbjct: 185 LFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGD 244
Query: 58 ALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDK 112
L H + + FTGS G + + AAK ++LK V E+GGK +V ED D++
Sbjct: 245 YLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIEL 304
Query: 113 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQI 172
AA+ + F GQ C AGSR VHE VYD+ +++ + + VG+P + GP I
Sbjct: 305 AAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVI 364
Query: 173 DSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 232
D F KI+ YI G + G +L +GG+ +KGY+I+PT+F + + ++EIFGPV
Sbjct: 365 DQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVV 423
Query: 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI--NCFDVFDAAI 290
+ K DE ++ +N ++YGL V T N D N + VG+++ NC
Sbjct: 424 AFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRNCTGAIVGYH 483
Query: 291 PFGGYKQSGQGREKGSYS-LSNYLQVKAV 318
PFGG+K SG + G L+ ++Q K +
Sbjct: 484 PFGGFKMSGTDSKAGGPDYLALHMQAKTI 512
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 179/319 (56%), Gaps = 7/319 (2%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 62
AWK+ PA+ GNT+V K +EQTPL+AL +++L+ + LP GV+N+++G G T G AL +H
Sbjct: 179 AWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINH 237
Query: 63 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
+V ++ TG TGK VL AAK+ +K LELGGK+P IV DAD++ +
Sbjct: 238 PKVGXVSITGDIATGKKVLAAAAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY 296
Query: 123 FNQGQCCCAGSRTFVHESVYDQFV-EKANALAMKRV-VGDPFKGGIQQGPQIDSEQFEKI 180
+N GQ C A R + +Y++ V + +A++ R + D + I GP I Q +++
Sbjct: 297 YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEI--GPLISRRQRDRV 354
Query: 181 LKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239
++ D ++ TGG +G++ +PTV G + I + E+FGPV S+ ++
Sbjct: 355 ASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG 414
Query: 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 299
D+ + +N S YGLA+ V+T ++ A L+ G WIN P GG KQSG
Sbjct: 415 KDDAVAWANDSDYGLASSVWTKDISKAXRAASRLQYGCTWINTHFXLTNEXPHGGIKQSG 474
Query: 300 QGREKGSYSLSNYLQVKAV 318
G++ Y+L +Y V+ +
Sbjct: 475 YGKDXSVYALEDYTAVRHI 493
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 172/321 (53%), Gaps = 11/321 (3%)
Query: 6 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 65
VGP +A GNT++ K AE + V ++ HEAG PPGV+N + G G GA L H +
Sbjct: 195 VGP-VAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRI 253
Query: 66 DKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ FTGS G + + A + + K +E GGK+ IV E AD D AAE +
Sbjct: 254 RFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ QGQ C A SR + + Y+ +E+ A + VG P + GP + +EQ K+
Sbjct: 314 AYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKV 372
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI G + G +L GG+RL +GY+I PTVFT V IA++EIFGPV S+++ KD
Sbjct: 373 LSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQS 298
E ++ +N + YGL GV++ + R VG+++ N PFGG+K S
Sbjct: 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
Query: 299 GQGREKGSYS-LSNYLQVKAV 318
G + G+ L +L++KAV
Sbjct: 492 GTNAKTGALDYLRLFLEMKAV 512
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 171/321 (53%), Gaps = 11/321 (3%)
Query: 6 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 65
VGP +A GNT++ K AE + V ++ HEAG PPGV+N + G G GA L H +
Sbjct: 195 VGP-VAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRI 253
Query: 66 DKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ FTGS G + + A + + K +E GGK IV E AD D AAE +
Sbjct: 254 RFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ QGQ C A SR + + Y+ +E+ A + VG P + GP + +EQ K+
Sbjct: 314 AYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKV 372
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI G + G +L GG+RL +GY+I PTVFT V IA++EIFGPV S+++ KD
Sbjct: 373 LSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQS 298
E ++ +N + YGL GV++ + R VG+++ N PFGG+K S
Sbjct: 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
Query: 299 GQGREKGSYS-LSNYLQVKAV 318
G + G+ L +L++KAV
Sbjct: 492 GTNAKTGALDYLRLFLEMKAV 512
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 11/321 (3%)
Query: 6 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 65
VGP +A GNT++ K AE + V ++ HEAG PPGV+N + G G GA L H +
Sbjct: 195 VGP-VAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRI 253
Query: 66 DKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
+ FTGS G + + A + + K +E GGK IV E AD D AAE +
Sbjct: 254 RFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVS 313
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
+ QGQ A SR + + Y+ +E+ A + VG P + GP + +EQ K+
Sbjct: 314 AYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKV 372
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
L YI G + G +L GG+RL +GY+I PTVFT V IA++EIFGPV S+++ KD
Sbjct: 373 LSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQS 298
E ++ +N + YGL GV++ + R VG+++ N PFGG+K S
Sbjct: 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
Query: 299 GQGREKGSYS-LSNYLQVKAV 318
G + G+ L +L++KAV
Sbjct: 492 GTNAKTGALDYLRLFLEMKAV 512
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 170/310 (54%), Gaps = 6/310 (1%)
Query: 6 VGPALACGNTIVLKTAEQTPLSALYV-SKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
V PALA GN +V+K A TP++ + +++ EAG+P GV++ V+G G G +H
Sbjct: 169 VAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAV 228
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSN-LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++FTGST G+ V +LA +K V LELGG +PF+V DAD+D AA+ A F
Sbjct: 229 PKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFL 288
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+QGQ C + +R V +V+D+F+EK GDP G GP I+ Q + +
Sbjct: 289 HQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEK 348
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
I GA ++ G +G + P VF+ V DM IA++EIFGP+ S+LK D
Sbjct: 349 IELAKKEGATVQVEGP---IEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHA 405
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGR 302
+ +NAS +GL+A V++ ++D A + G V IN V D + FGG K SG GR
Sbjct: 406 AELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGR 465
Query: 303 EKGSYSLSNY 312
G +++ +
Sbjct: 466 FNGDWAIEEF 475
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 161/299 (53%), Gaps = 6/299 (2%)
Query: 6 VGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
+ PA+A GN++V K QT +S ++K AGLP GVLN++ G + ++
Sbjct: 164 IAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPI 223
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
++FTGST G+ + ++A ++ K + LELGG +PF V DADVD+A + A + F +
Sbjct: 224 PRLISFTGSTAVGRHIGEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIH 282
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
QGQ C +R VH+ VYD+FVEK A + GD GP I+ Q EK L+ I
Sbjct: 283 QGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEII 342
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
G +L G+R+ G + P VF G ++ IA+ E+F P+ +I+K E I
Sbjct: 343 EQAKTDGIELAVEGKRV---GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAI 399
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGR 302
+N ++YGL++ VFT +L+ + G +N V D+ I FGG K SG GR
Sbjct: 400 DMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGR 458
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 177 bits (449), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 168/324 (51%), Gaps = 16/324 (4%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
K+ PAL GN I K Q +S L +++ EAGLP GV N ++G G G + H
Sbjct: 163 KIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQA 222
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
V+ + FTGST G+ + ++A ++P+ LELGGK IV EDAD++ A+ F
Sbjct: 223 VNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGY 279
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C A R V ESV D+ VEK + +G+P + P ID++ + + I
Sbjct: 280 SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLI 338
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
D GA T +R +G I P +F V DM +A +E FGPV I++ ++E I
Sbjct: 339 NDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAI 395
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-----FDVFDAAIPFGGYKQSG 299
+ SN S+YGL A +FT++ A + L VG+V IN D F PF G K+SG
Sbjct: 396 EISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNF----PFLGAKKSG 451
Query: 300 QGREKGSYSLSNYLQVKAVVTALK 323
G + YS+ VK+VV +K
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVFDIK 475
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 168/324 (51%), Gaps = 16/324 (4%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
K+ PAL GN I K Q +S L +++ EAGLP GV N ++G G G + H
Sbjct: 163 KIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQA 222
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
V+ + F+GST G+ + ++A ++P+ LELGGK IV EDAD++ A+ F
Sbjct: 223 VNFINFSGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGY 279
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C A R V ESV D+ VEK + +G+P + P ID++ + + I
Sbjct: 280 SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLI 338
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
D GA T +R +G I P +F V DM +A +E FGPV I++ ++E I
Sbjct: 339 NDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAI 395
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-----FDVFDAAIPFGGYKQSG 299
+ SN S+YGL A +FT++ A + L VG+V IN D F PF G K+SG
Sbjct: 396 EISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNF----PFLGAKKSG 451
Query: 300 QGREKGSYSLSNYLQVKAVVTALK 323
G + YS+ VK+VV +K
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVFDIK 475
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 167/324 (51%), Gaps = 16/324 (4%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
K+ PAL GN I K Q +S L +++ EAGLP GV N ++G G G + H
Sbjct: 163 KIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQA 222
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
V+ + FTGST G+ + ++A ++P+ L LGGK IV EDAD++ A+ F
Sbjct: 223 VNFINFTGSTGIGERIGKMAG---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGY 279
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C A R V ESV D+ VEK + +G+P + P ID++ + + I
Sbjct: 280 SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLI 338
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
D GA T +R +G I P +F V DM +A +E FGPV I++ ++E I
Sbjct: 339 NDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAI 395
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-----FDVFDAAIPFGGYKQSG 299
+ SN S+YGL A +FT++ A + L VG+V IN D F PF G K+SG
Sbjct: 396 EISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNF----PFLGAKKSG 451
Query: 300 QGREKGSYSLSNYLQVKAVVTALK 323
G + YS+ VK+VV +K
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVFDIK 475
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 174/324 (53%), Gaps = 13/324 (4%)
Query: 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAA 58
A K+ PA+A GN IV + + PL + ++K++ A +P GV N+++G G G
Sbjct: 148 AHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDE 207
Query: 59 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 118
+ + +V+ ++FTGS+ G+++ + K+ K + LELGG +P IV +DAD++KA
Sbjct: 208 IVVNEKVNMISFTGSSKVGELITK---KAGFKKIALELGGVNPNIVLKDADLNKAVNALI 264
Query: 119 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 178
F GQ C + V ES+ D+F+E A VG+P GP I E E
Sbjct: 265 KGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAE 324
Query: 179 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
+ K + +D G KL GG+R A Y PT+ +D++L K E F PV I++
Sbjct: 325 WVEKVVEKAIDEGGKLLLGGKRDKALFY---PTILEVDRDNIL-CKTETFAPVIPIIRTN 380
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQ 297
+ +E+I +N+++YGL + +FT++++ + L G V IN +F +PFGG K+
Sbjct: 381 E-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKK 439
Query: 298 SGQGREKGSYSLSNYLQVKAVVTA 321
SG GRE Y++ +K ++ +
Sbjct: 440 SGLGREGVKYAMEEMSNIKTIIIS 463
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 167/324 (51%), Gaps = 16/324 (4%)
Query: 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
K+ PAL GN I K Q +S L +++ EAGLP GV N ++G G G + H
Sbjct: 163 KIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQA 222
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
V+ + FTGST G+ + ++A ++P+ LELGGK IV EDAD++ A+ F
Sbjct: 223 VNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGY 279
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ A R V ESV D+ VEK + +G+P + P ID++ + + I
Sbjct: 280 SGQRSTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLI 338
Query: 185 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 244
D GA T +R +G I P +F V DM +A +E FGPV I++ ++E I
Sbjct: 339 NDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAI 395
Query: 245 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-----FDVFDAAIPFGGYKQSG 299
+ SN S+YGL A +FT++ A + L VG+V IN D F PF G K+SG
Sbjct: 396 EISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNF----PFLGAKKSG 451
Query: 300 QGREKGSYSLSNYLQVKAVVTALK 323
G + YS+ VK+VV +K
Sbjct: 452 AGIQGVKYSIEAMTTVKSVVFDIK 475
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 169/327 (51%), Gaps = 16/327 (4%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+ A K+ PAL GNT+V K A Q LS + + + L +AG P G++ +V+G G G L
Sbjct: 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLV 227
Query: 61 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 120
H +D + FTG TTTG+ +++ K+ + PV LELGGK P IV +DAD+ A
Sbjct: 228 EHPGIDMITFTGGTTTGE---RISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSG 284
Query: 121 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
F GQ C A R FV +SV DQ V L + VG P + P ID + I
Sbjct: 285 AFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSP-EDDADITPVIDEKSAAFI 343
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240
I ++ GA L +G +R +G + PT+ V M +A +E FGPV I++ KD
Sbjct: 344 QGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400
Query: 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-----DVFDAAIPFGGY 295
+E I SN S YGL A +FT + D A + + L VG+V IN D F PF G
Sbjct: 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHF----PFLGV 456
Query: 296 KQSGQGREKGSYSLSNYLQVKAVVTAL 322
K+SG G + SL + + + V L
Sbjct: 457 KKSGLGVQGIKPSLLSMTRERVTVLNL 483
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 161/304 (52%), Gaps = 4/304 (1%)
Query: 17 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 76
V+K A +TPL+ + + + LP G +N+V G G L H +V L+FTGST
Sbjct: 179 VIKPASETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEV 238
Query: 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 136
G+ ++ A+ +K + LELGG +PFIV +DAD++ AA+ F GQ C +R F
Sbjct: 239 GRKLIVDTAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIF 297
Query: 137 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 196
VHE V D F +K K VGD GI GP I+ + F+K+ ++++ +D GA L
Sbjct: 298 VHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVA 357
Query: 197 GGE--RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 254
G + LG G + PTV GV + ++E FGP+ ++ +EVI N +++GL
Sbjct: 358 GKQPAELG-DGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGL 416
Query: 255 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 314
A+ VFT + + A + LR G V N PFGG K SG GRE G L +++
Sbjct: 417 ASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVE 476
Query: 315 VKAV 318
+ V
Sbjct: 477 AQTV 480
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 165/329 (50%), Gaps = 25/329 (7%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAG 56
++ W AL CGN + K A TPL+++ V+K+ L + LP + ++ G G G
Sbjct: 171 VYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCG-GADIG 229
Query: 57 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 116
A+A VD L+FTGST GK+V + + + + LELGG + IV EDAD++
Sbjct: 230 TAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKL-LELGGNNAIIVFEDADLNLVVPS 288
Query: 117 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKGGIQQGPQIDSE 175
A +A GQ C R +HESV+D VE+ A A K+V +GDP+ GP +
Sbjct: 289 AVFASVGTAGQRCTTTRRLMLHESVHDAVVERI-AKAYKQVRIGDPWDPSTLYGPLHTKQ 347
Query: 176 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235
++ L I G L GG+ + G Y++PT+ TG+ D I E F P+ +L
Sbjct: 348 AVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVL 407
Query: 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWINCFDVFDAAIP--- 291
K+K +E +N Q GL++ +FT +L R R +G +C + + IP
Sbjct: 408 KFKTEEEAFAWNNEVQQGLSSSIFTKDLG------RVFRWLGPKGSDC-GIVNVNIPTSG 460
Query: 292 ------FGGYKQSGQGREKGSYSLSNYLQ 314
FGG K +G GRE GS S Y++
Sbjct: 461 AEIGGAFGGEKHTGGGRESGSDSWKQYMR 489
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 151/319 (47%), Gaps = 4/319 (1%)
Query: 7 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG-VLNIVSGYGPTAGAALASHMEV 65
P GN I+LK A P SA +K++ AG P G ++N+ Y A + + +
Sbjct: 145 APNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD--IIADPRI 202
Query: 66 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 125
+A TGS G V + A K NLK T ELGG FIV +DAD + + A +N
Sbjct: 203 QGVALTGSERGGSAVAEAAGK-NLKKSTXELGGNDAFIVLDDADPQVLRNVLNDARTYND 261
Query: 126 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 185
GQ C + R V +S YD+ + + + GDP + P + EK+ ++
Sbjct: 262 GQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVK 321
Query: 186 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 245
+D GAK+ + +KG + +PT+ T + D + E+FGP+ + +D + IQ
Sbjct: 322 EAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQ 381
Query: 246 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 305
+N S YGL + V ++D A + + G IN + +PFGG K+SG GRE
Sbjct: 382 LANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGRWITSGELPFGGIKKSGYGRELS 441
Query: 306 SYSLSNYLQVKAVVTALKN 324
L ++ V+ KN
Sbjct: 442 GLGLXAFVNEHLVIDVTKN 460
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 159/313 (50%), Gaps = 14/313 (4%)
Query: 13 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 72
GN +V+K + PL A K L +AG PP + +++ G A +A V ++FTG
Sbjct: 185 GNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTG 243
Query: 73 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 132
ST G+ V+++ +K +ELGG P IV EDAD+D AA+ ++ GQ C A
Sbjct: 244 STEVGERVVKVG---GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI 300
Query: 133 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 192
VY + VE+ VGDP + GP I ++++ I V+ G
Sbjct: 301 KLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGG 360
Query: 193 KLETGGERLGAKGYYIKPTVFTGVKD---DMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 249
++ GG RLG Y++PT+ D DM++ K E+F PV S ++ KDLD+ I+ +N
Sbjct: 361 RVLAGGRRLGPT--YVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANG 418
Query: 250 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGS 306
YGL A VF ++ +R L VG+++IN D+ I PFGG K+SG RE
Sbjct: 419 RPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN--DMPRHGIGYYPFGGRKKSGVFREGIG 476
Query: 307 YSLSNYLQVKAVV 319
Y++ K +V
Sbjct: 477 YAVEAVTAYKTIV 489
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 8/304 (2%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+ GN +V K + T + ++ +L EAGLP GV N G G G L H ++ +
Sbjct: 690 AIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLI 749
Query: 69 AFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
AFTGS TG +++ AAK +N+K + E+GGK+ I+ +DAD+D+A Y+ F
Sbjct: 750 AFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFG 809
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
QGQ C A SR V ++VYD+F+E+ ++A VG G D + + I +Y
Sbjct: 810 FQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEY 869
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
G G L G +GY++ T+ G+K + IA++EIFGPV ++++ KD D+
Sbjct: 870 AEIGKREGHVLYESPVPAG-EGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQA 928
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG 301
I+ +N++Q+ L G+F+ + + R RVG+++IN + PFGG + SG G
Sbjct: 929 IEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVG 988
Query: 302 REKG 305
+ G
Sbjct: 989 TKAG 992
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 162/322 (50%), Gaps = 7/322 (2%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
W A+A GNT +LK +E+TPL + +L +AGLP GV N+V G L H
Sbjct: 160 WMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGIL-EHP 218
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
E+ ++F GS G+ V + ++ NLK V G K+ IV DA+++ A F
Sbjct: 219 EIKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFG 277
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
+ G+ C A + V E + D+F+ K +G+ G+ GP I + ++ L Y
Sbjct: 278 SAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSY 337
Query: 184 IRSGVDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
I G++ GA+L G E + GY++ PT+F V +M I KDEIF PV S+++ K+L E
Sbjct: 338 IEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKE 397
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQS--G 299
I+ +N S++ A +FT N + + G + IN A PF G+K S G
Sbjct: 398 AIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFG 457
Query: 300 QGREKGSYSLSNYLQVKAVVTA 321
G S+ Y + K VVTA
Sbjct: 458 TLHANGKDSVDFYTR-KKVVTA 478
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 158/313 (50%), Gaps = 14/313 (4%)
Query: 13 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 72
GN +V+K + PL A K L +AG PP + +++ G A +A V ++FTG
Sbjct: 185 GNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTG 243
Query: 73 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 132
ST G+ V+++ +K +ELGG P IV EDAD+D AA+ ++ GQ C A
Sbjct: 244 STEVGERVVKVG---GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI 300
Query: 133 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 192
VY + VE+ VGDP + GP I ++++ I V+ G
Sbjct: 301 KLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGG 360
Query: 193 KLETGGERLGAKGYYIKPTVFTGVKD---DMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 249
++ GG RLG Y++PT+ D DM++ K E+F PV ++ KDLD+ I+ +N
Sbjct: 361 RVLAGGRRLGPT--YVQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANG 418
Query: 250 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGS 306
YGL A VF ++ +R L VG+++IN D+ I PFGG K+SG RE
Sbjct: 419 RPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN--DMPRHGIGYYPFGGRKKSGVFREGIG 476
Query: 307 YSLSNYLQVKAVV 319
Y++ K +V
Sbjct: 477 YAVEAVTAYKTIV 489
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 157/313 (50%), Gaps = 14/313 (4%)
Query: 13 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 72
GN +V+K + PL A K L +AG PP + +++ G A +A V ++FTG
Sbjct: 185 GNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTG 243
Query: 73 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 132
ST G+ V+++ +K +ELGG P IV EDAD+D AA+ ++ GQ C A
Sbjct: 244 STEVGERVVKVG---GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI 300
Query: 133 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 192
VY + VE+ VGDP + GP I ++++ I V+ G
Sbjct: 301 KLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGG 360
Query: 193 KLETGGERLGAKGYYIKPTVFTGVKD---DMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 249
++ GG RLG Y++PT D DM++ K E+F PV ++ KDLD+ I+ +N
Sbjct: 361 RVLAGGRRLGPT--YVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANG 418
Query: 250 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGS 306
YGL A VF ++ +R L VG+++IN D+ I PFGG K+SG RE
Sbjct: 419 RPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN--DMPRHGIGYYPFGGRKKSGVFREGIG 476
Query: 307 YSLSNYLQVKAVV 319
Y++ K +V
Sbjct: 477 YAVEAVTAYKTIV 489
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 148/315 (46%), Gaps = 10/315 (3%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
P L GN+ +LK A A ++++L EAG P GV YG ++
Sbjct: 149 PILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV------YGWVNANNEGVSQXIND 202
Query: 68 LAFTGSTTTGKI----VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
T TG + + A + LK LELGG PFIV DAD++ A + A +
Sbjct: 203 PRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ 262
Query: 124 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 183
N GQ C A R V E + F ++ A A GDP GP + +++ +
Sbjct: 263 NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQ 322
Query: 184 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 243
+++ V GA+L GGE++ +G Y TV V D + E+FGPV +I KD
Sbjct: 323 VQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHA 382
Query: 244 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 303
+ +N S++GL+A +FT + A L G V+IN + DA + FGG K+SG GRE
Sbjct: 383 LALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYSASDARVAFGGVKKSGFGRE 442
Query: 304 KGSYSLSNYLQVKAV 318
+ L + V+ V
Sbjct: 443 LSHFGLHEFCNVQTV 457
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 156/327 (47%), Gaps = 21/327 (6%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAG 56
++ W A+ CGN + K A T L ++ V+K+ L + LP + ++ G G G
Sbjct: 173 VYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIG 231
Query: 57 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 116
A+A V+ L+FTGST GK V L + LELGG + I EDAD+
Sbjct: 232 TAMAKDERVNLLSFTGSTQVGKQV-GLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPS 290
Query: 117 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQ 176
A +A GQ C R F+HES++D+ V + + VG+P+ + GP +
Sbjct: 291 ALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQA 350
Query: 177 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236
L + G + GG+ + G Y++PT+ TG+ D IA E F P+ + K
Sbjct: 351 VSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFK 410
Query: 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP----- 291
+++ +EV +N + GL++ +FT +L + R L G +C + + IP
Sbjct: 411 FQNEEEVFAWNNEVKQGLSSSIFTKDL---GRIFRWL--GPKGSDC-GIVNVNIPTSGAE 464
Query: 292 ----FGGYKQSGQGREKGSYSLSNYLQ 314
FGG K +G GRE GS + Y++
Sbjct: 465 IGGAFGGEKHTGGGRESGSDAWKQYMR 491
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 14/312 (4%)
Query: 1 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 60
+F +V AL GN++V K AEQTP A LLHEAG+P L +V+G G GAAL
Sbjct: 665 IFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALT 723
Query: 61 SHMEVDKLAFTGSTTTGK-IVLQLAAKSN-LKPVTLELGGKSPFIVCEDADVDKAAELAH 118
+H ++ + FTGST + I LAAK + P+ E GG + I A ++ A+
Sbjct: 724 AHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV 783
Query: 119 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 178
+ F + GQ C A FV E V D+ +E A + +GDP GP ID E +
Sbjct: 784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQ 843
Query: 179 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
++ +I + + A+L G +G ++ P +F + L +E+FGP+ +++Y+
Sbjct: 844 RLDAHI-ARMKTEARLHFAGP--APEGCFVAPHIFELTEAGQLT--EEVFGPILHVVRYR 898
Query: 239 --DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFG 293
+L+ V++ + YGL GV + D+ ++ ++VG++++N ++ A + PFG
Sbjct: 899 PENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNR-NMIGAVVGVQPFG 957
Query: 294 GYKQSGQGREKG 305
G SG G + G
Sbjct: 958 GNGLSGTGPKAG 969
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 10/325 (3%)
Query: 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 63
W PA+ACGN +LK +E+ P + +++L EAGLP G+LN+V+G A A+ +H
Sbjct: 181 WXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLPAGILNVVNG-DKGAVDAILTHP 239
Query: 64 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 123
++ ++F GST + V AA N K G K+ I+ DAD+D+AA A +
Sbjct: 240 DIAAVSFVGSTPIARYVYGTAA-XNGKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYG 298
Query: 124 NQGQCCCAGSRTF-VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 182
+ G+ C A S V E ++ ++K +G GP + E ++I
Sbjct: 299 SAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRS 358
Query: 183 YIRSGVDGGAKLETGGERLGAKGY----YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238
I SG++ GAKL G +GY +I +F V D I K EIFGPV S+++ +
Sbjct: 359 LIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRAR 418
Query: 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQ 297
+ +E + +YG ++T + D A + +G V +N V A FGG+K
Sbjct: 419 NYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGXVGVNVPIPVPLAYHSFGGWKS 478
Query: 298 SGQG--REKGSYSLSNYLQVKAVVT 320
S G + G+ S+ + + K + +
Sbjct: 479 SSFGDLNQHGTDSIKFWTRTKTITS 503
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 164/334 (49%), Gaps = 23/334 (6%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP---GVLNIVSGYGPTAGAALASHME 64
PAL G +V+K +E P +V+ LL P VL V G G T GA L ++
Sbjct: 149 PALLAGCAVVVKPSEIAPR---FVAPLLXALNTVPELRDVLIFVEGGGET-GANLINY-- 202
Query: 65 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 124
VD + FTGS TG+ V + AA+ + P LELGGK P IV E A+++ A + N
Sbjct: 203 VDFVCFTGSVATGREVAETAARRFI-PAYLELGGKDPAIVLESANLELATSAILWGAVVN 261
Query: 125 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 184
GQ C + R +V ES +++F + A A + + P GP I +Q I +I
Sbjct: 262 TGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHI 321
Query: 185 RSGVDGGAKLETGG--ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 242
V+ GA + GG E LG G++ +PTV T V + +E FGP+ + + D++E
Sbjct: 322 LDAVEKGAVIHCGGKVEELGG-GWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEE 380
Query: 243 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ----S 298
+ +N + YGL+A VF + D A + R L G++ IN D A G K S
Sbjct: 381 AVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISIN--DAALTAXXHEGEKNAFNFS 438
Query: 299 GQGREK-GSYSLSNYLQVKAVV---TALKNPAWL 328
G G + G+ L +L+ +A + + +P W
Sbjct: 439 GLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 153/319 (47%), Gaps = 14/319 (4%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+A GN +VLK +E + A ++ ++ + L + +++G P L D +
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTELLKERF--DHI 200
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
+TGST GKI++ AAK +L PVTLELGGKSP V ++ D+D A + F N GQ
Sbjct: 201 LYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQT 259
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 188
C A S+ +Q VEK ++K G+ K G I + F++++ G+
Sbjct: 260 CVAPDYILCDPSIQNQIVEKLKK-SLKEFYGEDAKKSRDYGRIISARHFQRVM-----GL 313
Query: 189 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 248
G K+ GG A YI PT+ T V + ++EIFGPV I+ + L+E IQ N
Sbjct: 314 IEGQKVAYGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFIN 372
Query: 249 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS 306
+ LA +F+ N ++ G V N + ++PFGG SG G G
Sbjct: 373 QREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGK 432
Query: 307 YSLSNYLQVKA-VVTALKN 324
S + ++ +V L N
Sbjct: 433 KSFETFSHRRSCLVRPLMN 451
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 151/313 (48%), Gaps = 16/313 (5%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+ GNT ++K +E TP ++ + K++ EA P + ++ G G + L S + D +
Sbjct: 154 AIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFI 210
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
FTGS GK+V+Q AAK +L PV LELGGK P IV DAD+D+ + F N GQ
Sbjct: 211 FFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQT 269
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 188
C A +VH SV D +E+ + G + Q+ ++ +L+ + V
Sbjct: 270 CIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQV--QRLVSLLEATQGQV 327
Query: 189 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 248
G++ + L A TV GV+ + + +E+FGP+ +L++ + I + N
Sbjct: 328 LVGSQADVSKRALSA-------TVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVN 380
Query: 249 ASQ-YGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKG 305
LA VF ++D A ++ ++ G +N F +PFGG SG G G
Sbjct: 381 KHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHG 440
Query: 306 SYSLSNYLQVKAV 318
+S + K+V
Sbjct: 441 HFSYLTFTHKKSV 453
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 149/319 (46%), Gaps = 14/319 (4%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+A GN ++LK +E + A ++ L+ + + + +V G P L D +
Sbjct: 127 AVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPETTELLKERF--DHI 183
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
+TGST GKIV+ AAK +L PVTLELGGKSP V +D D+D A + F N GQ
Sbjct: 184 MYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQT 242
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 188
C A S+ +Q VEK ++K G+ K G I+ F+++ G+
Sbjct: 243 CVAPDYILCDPSIQNQIVEKLKK-SLKDFYGEDAKQSRDYGRIINDRHFQRV-----KGL 296
Query: 189 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 248
K+ GG YI PT+ V + ++EIFGPV I+ + L+E IQ N
Sbjct: 297 IDNQKVAHGGT-WDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFIN 355
Query: 249 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS 306
+ LA VF++N ++ G V N + +PFGG SG G G
Sbjct: 356 QREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGK 415
Query: 307 YSLSNYLQVKA-VVTALKN 324
S + ++ +V +L N
Sbjct: 416 KSFETFSHRRSCLVKSLLN 434
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 143/306 (46%), Gaps = 21/306 (6%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN +V K +E TP A K +AGLP GVLN+V G G G ALA+H +D
Sbjct: 162 PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDG 220
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 127
L FTGS+ TG ++ K + LE GG +P +V E AD+D A + F + GQ
Sbjct: 221 LFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQ 280
Query: 128 CCCAGSRTFVHESVY-DQFVEKANALAMKRVVGD------PFKGGIQQGPQIDSEQFEKI 180
C R V + + D + + A++ VG PF G + I E +
Sbjct: 281 RCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFXGAV-----ISLSAAEHL 335
Query: 181 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK---DEIFGPVQSILKY 237
LK + GA+ + + P G+ D +A+ +E FGP+ +++Y
Sbjct: 336 LKAQEHLIGKGAQPLLAXTQPIDGAALLTP----GILDVSAVAERPDEEFFGPLLQVIRY 391
Query: 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYK 296
D I+ +NA+QYGLAAG+ + + + + R G V W ++ PFGG
Sbjct: 392 SDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIG 451
Query: 297 QSGQGR 302
SG R
Sbjct: 452 ASGNHR 457
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 16/313 (5%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 68
A+ GNT ++K +E TP ++ + K++ EA P + ++ G G + L S + D +
Sbjct: 154 AIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFI 210
Query: 69 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 128
FTGS GK+V+Q AAK +L PV LELGGK P IV DAD+D+ + F N GQ
Sbjct: 211 FFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQT 269
Query: 129 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 188
A +VH SV D +E+ + G + Q+ ++ +L+ + V
Sbjct: 270 XIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQV--QRLVSLLEATQGQV 327
Query: 189 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 248
G++ + L A TV GV+ + + +E+FGP+ +L++ + I + N
Sbjct: 328 LVGSQADVSKRALSA-------TVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVN 380
Query: 249 ASQ-YGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKG 305
LA VF ++D A ++ ++ G +N F +PFGG SG G G
Sbjct: 381 KHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHG 440
Query: 306 SYSLSNYLQVKAV 318
+S + K+V
Sbjct: 441 HFSYLTFTHKKSV 453
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 19/314 (6%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN ++ K ++ L++ V ++L EAGLPP ++ V GPT G + S +
Sbjct: 223 PAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCG 281
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHYALF 122
+ FTGS T K + + A++ + T E GGK+ V ADVD + F
Sbjct: 282 INFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF 341
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKIL 181
GQ C A SR +V +S++ Q + + VGDP + G ID++ F +I
Sbjct: 342 EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIK 401
Query: 182 KYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD- 239
K++ + + GG+ + GYY++P + I K+EIFGPV ++ Y D
Sbjct: 402 KWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDD 461
Query: 240 -LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----P 291
E ++ ++ + YGL VF + R LR G+ +IN D ++ P
Sbjct: 462 KYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYIN--DKSTGSVVGQQP 519
Query: 292 FGGYKQSGQGREKG 305
FGG + SG + G
Sbjct: 520 FGGARASGTNDKPG 533
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 19/314 (6%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN ++ K ++ L++ V ++L EAGLPP ++ V GP G + S +
Sbjct: 226 PAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCG 284
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHYALF 122
+ FTGS T K + + A++ + T E GGK+ V ADV+ + F
Sbjct: 285 INFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAF 344
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKIL 181
GQ C A SR +V S++ Q + + VGDP + G ID++ F +I
Sbjct: 345 EYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIK 404
Query: 182 KYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD- 239
K++ + + GG+ + GY+++P + I K+EIFGPV S+ Y D
Sbjct: 405 KWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDD 464
Query: 240 -LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----P 291
E +Q ++ + YGL VF+ + D + LR G+ +IN D +I P
Sbjct: 465 KYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN--DKSTGSIVGQQP 522
Query: 292 FGGYKQSGQGREKG 305
FGG + SG + G
Sbjct: 523 FGGARASGTNDKPG 536
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 19/314 (6%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN ++ K ++ L++ V ++L EAGLPP ++ V GP G + S +
Sbjct: 226 PAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCG 284
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHYALF 122
+ FTGS T K + + A++ + T E GGK+ V ADV+ + F
Sbjct: 285 INFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAF 344
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKIL 181
GQ C A +R +V S++ Q + + VGDP + G ID++ F +I
Sbjct: 345 EYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIK 404
Query: 182 KYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD- 239
K++ + + GG+ + GY+++P + I K+EIFGPV S+ Y D
Sbjct: 405 KWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDD 464
Query: 240 -LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----P 291
E +Q ++ + YGL VF+ + D + LR G+ +IN D +I P
Sbjct: 465 KYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN--DKSTGSIVGQQP 522
Query: 292 FGGYKQSGQGREKG 305
FGG + SG + G
Sbjct: 523 FGGARASGTNDKPG 536
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 147/314 (46%), Gaps = 19/314 (6%)
Query: 8 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 67
PAL GN ++ K ++ L++ V ++L EAGLPP ++ V GP G + S +
Sbjct: 226 PAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCG 284
Query: 68 LAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHYALF 122
+ FTGS T K + + A++ + T E GGK+ V ADV+ + F
Sbjct: 285 INFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAF 344
Query: 123 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKIL 181
GQ C A R +V S++ Q + + VGDP + G ID++ F +I
Sbjct: 345 EYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIK 404
Query: 182 KYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD- 239
K++ + + GG+ + GY+++P + I K+EIFGPV S+ Y D
Sbjct: 405 KWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDD 464
Query: 240 -LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----P 291
E +Q ++ + YGL VF+ + D + LR G+ +IN D +I P
Sbjct: 465 KYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN--DKSTGSIVGQQP 522
Query: 292 FGGYKQSGQGREKG 305
FGG + SG + G
Sbjct: 523 FGGARASGTNDKPG 536
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 42/262 (16%)
Query: 4 W-KVGPALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
W K PAL G +++K A T L+ V+ ++ LPPG L+I+ G ++ L
Sbjct: 169 WEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQ 225
Query: 62 HMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 115
D ++FTGS T + +Q A+ N++ +L I+C DA D A
Sbjct: 226 IRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSA-----ILCADATPDTPA- 279
Query: 116 LAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 166
+ LF + GQ C A R FV E+ + +E A K VG+P +
Sbjct: 280 ---FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 167 QQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGERLGAKGYYIKPTVFTGVKD 218
+ G + EQ+E +L I + D A L + A + P +F
Sbjct: 337 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAA---CVAPHLFVVNDP 393
Query: 219 D--MLIAKDEIFGPVQSILKYK 238
D L+ E+FGPV S+ Y+
Sbjct: 394 DNATLLHDVEVFGPVASVAPYR 415
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 42/262 (16%)
Query: 4 W-KVGPALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
W K PAL G +++K A T L+ V+ ++ LPPG L+I+ G ++ L
Sbjct: 169 WEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQ 225
Query: 62 HMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 115
D ++FTGS T + +Q A+ N++ +L I+C DA D A
Sbjct: 226 IRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSA-----ILCADATPDTPA- 279
Query: 116 LAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 166
+ LF + GQ C A R FV E+ + +E A K VG+P +
Sbjct: 280 ---FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 167 QQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGERLGAKGYYIKPTVFTGVKD 218
+ G + EQ+E +L I + D A L + A + P +F
Sbjct: 337 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAA---CVAPHLFVVNDP 393
Query: 219 D--MLIAKDEIFGPVQSILKYK 238
D L+ E+FGPV S+ Y+
Sbjct: 394 DNATLLHDVEVFGPVASVAPYR 415
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 42/262 (16%)
Query: 4 W-KVGPALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
W K PAL G +++K A T L+ V+ ++ LPPG L+I+ G ++ L
Sbjct: 169 WAKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQ 225
Query: 62 HMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 115
D ++FTGS T + +Q A+ N++ +L I+C DA D A
Sbjct: 226 IRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSA-----ILCADATPDTPA- 279
Query: 116 LAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 166
+ LF + GQ C A R FV E+ + +E A K VG+P +
Sbjct: 280 ---FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 167 QQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGERLGAKGYYIKPTVFTGVKD 218
+ G + EQ+E +L I + D A L + A + P +F
Sbjct: 337 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAA---CVAPHLFVVNDP 393
Query: 219 D--MLIAKDEIFGPVQSILKYK 238
D L+ E+FGPV S+ Y+
Sbjct: 394 DNATLLHDVEVFGPVASVAPYR 415
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 42/262 (16%)
Query: 4 W-KVGPALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
W K PAL G +++K A T L+ V+ ++ LPPG L+I+ G ++ L
Sbjct: 167 WEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQ 223
Query: 62 HMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 115
D ++FTGS T + +Q A+ N++ +L I+C DA D A
Sbjct: 224 IRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSA-----ILCADATPDTPA- 277
Query: 116 LAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 166
+ LF + GQ C A R FV E+ + +E A K VG+P +
Sbjct: 278 ---FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 334
Query: 167 QQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGERLGAKGYYIKPTVFTGVKD 218
+ G + EQ+E +L I + D A L + A + P +F
Sbjct: 335 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAA---CVAPHLFVVNDP 391
Query: 219 D--MLIAKDEIFGPVQSILKYK 238
D L+ E+FGPV S+ Y+
Sbjct: 392 DNATLLHDVEVFGPVASVAPYR 413
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 4 W-KVGPALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 61
W K PAL G +++K A T L+ V+ ++ LPPG L+I+ G ++ L
Sbjct: 169 WEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQ 225
Query: 62 HMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 115
D ++FTGS T + +Q A+ N++ +L I+C DA D A
Sbjct: 226 IRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSA-----ILCADATPDTPA- 279
Query: 116 LAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 166
+ LF + GQ A R FV E+ + +E A K VG+P +
Sbjct: 280 ---FDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 167 QQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGERLGAKGYYIKPTVFTGVKD 218
+ G + EQ+E +L I + D A L + A + P +F
Sbjct: 337 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAA---CVAPHLFVVNDP 393
Query: 219 D--MLIAKDEIFGPVQSILKYK 238
D L+ E+FGPV S+ Y+
Sbjct: 394 DNATLLHDVEVFGPVASVAPYR 415
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 130/332 (39%), Gaps = 42/332 (12%)
Query: 9 ALACGNTIVLKTAEQTP----LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 64
ALA G +V+K P + A V + + G+ PGV +++ G G AL H
Sbjct: 195 ALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPH 254
Query: 65 VDKLAFTGSTTTGKIVLQL-AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH---YA 120
+ + FTGS G+ + L AA+ P ELG +P + +A +A L +
Sbjct: 255 IKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGS 314
Query: 121 LFFNQGQ-CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF-- 177
L GQ C G + + D+F A K GI + + +F
Sbjct: 315 LTXGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTXLTDGIAKAYRDGQARFAT 374
Query: 178 ----EKILKYIRSGVDGGAKL-ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 232
+ +L SG D L ET G + + D L +E+FGP+
Sbjct: 375 RNAVKPLLATESSGRDASPNLFETTGAQF--------------LADHAL--GEEVFGPLG 418
Query: 233 SILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRAL--RVGSVWINCF----D 284
+++ E + + Q L A + +L+TA L L + G V +N F +
Sbjct: 419 LVVRVGSPAEXEELARGFQGQLTATIHXDAGDLETARRLRPVLERKAGRVLVNGFPTGVE 478
Query: 285 VFDAAIPFGGYKQSGQ--GREKGSYSLSNYLQ 314
V D+ + G Y S G+ S+ +L+
Sbjct: 479 VVDSXVHGGPYPASTNFGATSVGTXSIRRFLR 510
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 9 ALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHME 64
ALA G +++K P ++ V++ + +A LP + ++ G G AL SH E
Sbjct: 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPE 221
Query: 65 VDKLAFTGSTTTGKIVLQLA-AKSNLKPVTLELGGKSPFIVCEDADVDKA--AELAHYAL 121
+ + FTGS G+ + LA + P ELG +P + A KA A+ ++
Sbjct: 222 IKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASM 281
Query: 122 FFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 180
GQ C F + Q F+E A +L ++ GI+ DS Q + +
Sbjct: 282 TMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIR-----DSYQSQVV 336
Query: 181 LKYIRSGVD 189
+ G+D
Sbjct: 337 SRGSDDGID 345
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 38 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 97
AG P ++ + AL H ++ + TG K AA S+ KP
Sbjct: 160 AGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK-----AAYSSGKPAIGVGA 214
Query: 98 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 148
G P ++ E AD+ +A + F+ G C + V + VYD+ E+
Sbjct: 215 GNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKER 265
>pdb|2ZBK|A Chain A, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|C Chain C, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|E Chain E, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|G Chain G, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
Length = 389
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 30 YVSKLLHEAGLPPGVLNIVSGYGPTAGA-----ALASHMEVDKLAFTGSTTTGKIVLQLA 84
+V +L E LP +L YG + +++ E ++LA + G + +
Sbjct: 244 FVRRLNEELKLPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMGDIF 303
Query: 85 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 122
S KP E K+ I +DAD+ +A E+ +Y F
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKDADIKRAEEIKNYEWF 341
>pdb|3IDE|A Chain A, Structure Of Ipnv Subviral Particle
pdb|3IDE|B Chain B, Structure Of Ipnv Subviral Particle
pdb|3IDE|C Chain C, Structure Of Ipnv Subviral Particle
pdb|3IDE|D Chain D, Structure Of Ipnv Subviral Particle
pdb|3IDE|E Chain E, Structure Of Ipnv Subviral Particle
Length = 442
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 246 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ---GR 302
R NA+Q GL F L+T+ L +A G + +D+ + +P G Y +G
Sbjct: 69 RWNANQTGLE---FDQWLETSQDLKKAFNYGRLISRKYDIQSSTLPAGLYALNGTLNAAT 125
Query: 303 EKGSYSLSNYLQVKAVVTALKNP 325
+GS S L ++++ NP
Sbjct: 126 FEGSLSEVESLTYNSLMSLTTNP 148
>pdb|1M3U|A Chain A, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|B Chain B, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|C Chain C, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|D Chain D, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|E Chain E, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|F Chain F, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|G Chain G, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|H Chain H, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|I Chain I, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
pdb|1M3U|J Chain J, Crystal Structure Of Ketopantoate Hydroxymethyltransferase
Complexed The Product Ketopantoate
Length = 264
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 292 FGGYKQSGQGREKGSYSLSNYLQVKA 317
FGGYK G+G E G LS+ L ++A
Sbjct: 147 FGGYKVQGRGDEAGDQLLSDALALEA 172
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 204 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 263
K I P V +DD E + +I K++DE I+ G + + T N
Sbjct: 303 KTREIVPDVVPATEDDW---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359
Query: 264 DTANTLMRALRVGSVWINCFDVFDAAIPFG 293
A + + +V++N F FG
Sbjct: 360 SNAKKFVSEIDAAAVYVNASTRFTDGGQFG 389
>pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile
Length = 396
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 199 ERLGAKGYY---IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 255
E+ A+G + I P V G K D ++ KDE P ++ K L ++ G A
Sbjct: 192 EKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNA 251
Query: 256 AGV 258
+G+
Sbjct: 252 SGI 254
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,034,198
Number of Sequences: 62578
Number of extensions: 427588
Number of successful extensions: 1464
Number of sequences better than 100.0: 107
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1170
Number of HSP's gapped (non-prelim): 114
length of query: 328
length of database: 14,973,337
effective HSP length: 99
effective length of query: 229
effective length of database: 8,778,115
effective search space: 2010188335
effective search space used: 2010188335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)