Query 020284
Match_columns 328
No_of_seqs 172 out of 1753
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 14:34:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1.8E-83 6.3E-88 620.1 35.7 323 2-324 159-485 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 7.9E-81 2.7E-85 606.3 36.2 326 2-328 187-518 (520)
3 3ifg_A Succinate-semialdehyde 100.0 8.8E-81 3E-85 601.9 32.8 319 2-321 165-483 (484)
4 3ros_A NAD-dependent aldehyde 100.0 9.7E-81 3.3E-85 601.2 32.5 319 2-322 140-458 (484)
5 3iwj_A Putative aminoaldehyde 100.0 3.1E-80 1E-84 601.2 35.2 326 2-328 168-497 (503)
6 3rh9_A Succinate-semialdehyde 100.0 2.2E-80 7.6E-85 601.3 33.6 320 2-322 164-484 (506)
7 2o2p_A Formyltetrahydrofolate 100.0 3.9E-80 1.3E-84 601.0 34.5 319 2-321 195-516 (517)
8 3u4j_A NAD-dependent aldehyde 100.0 7.5E-80 2.6E-84 600.4 34.8 321 2-323 178-499 (528)
9 3ek1_A Aldehyde dehydrogenase; 100.0 3E-80 1E-84 600.0 31.5 318 2-322 185-502 (504)
10 1bxs_A Aldehyde dehydrogenase; 100.0 1.3E-79 4.3E-84 595.8 35.5 321 2-323 176-497 (501)
11 3k2w_A Betaine-aldehyde dehydr 100.0 6.8E-80 2.3E-84 597.9 32.5 322 2-324 165-490 (497)
12 3jz4_A Succinate-semialdehyde 100.0 2.3E-79 8E-84 592.7 35.6 319 2-321 162-480 (481)
13 4f3x_A Putative aldehyde dehyd 100.0 6.2E-80 2.1E-84 597.5 31.4 319 2-322 178-497 (498)
14 1o04_A Aldehyde dehydrogenase, 100.0 1E-79 3.5E-84 596.2 32.8 321 2-323 175-496 (500)
15 3i44_A Aldehyde dehydrogenase; 100.0 3.9E-79 1.3E-83 591.8 34.9 315 2-319 178-495 (497)
16 3b4w_A Aldehyde dehydrogenase; 100.0 2.4E-79 8.2E-84 593.4 33.3 318 2-322 163-482 (495)
17 2d4e_A 5-carboxymethyl-2-hydro 100.0 1E-78 3.6E-83 591.6 36.5 319 2-322 179-505 (515)
18 2imp_A Lactaldehyde dehydrogen 100.0 6.9E-79 2.4E-83 589.1 34.0 319 2-321 159-478 (479)
19 1a4s_A ALDH, betaine aldehyde 100.0 4.1E-79 1.4E-83 592.9 31.7 319 2-322 172-496 (503)
20 3prl_A NADP-dependent glyceral 100.0 6.8E-79 2.3E-83 591.2 33.1 315 2-323 169-484 (505)
21 3r31_A BADH, betaine aldehyde 100.0 1.9E-79 6.4E-84 596.2 28.3 319 2-322 167-488 (517)
22 1wnd_A Putative betaine aldehy 100.0 1.2E-78 3.9E-83 588.2 33.4 317 2-321 176-494 (495)
23 3r64_A NAD dependent benzaldeh 100.0 1.9E-78 6.5E-83 589.2 35.0 323 2-328 165-496 (508)
24 2ve5_A BADH, betaine aldehyde 100.0 3.2E-78 1.1E-82 586.3 36.0 321 2-323 159-484 (490)
25 4e4g_A Methylmalonate-semialde 100.0 1.2E-78 4.3E-83 590.9 33.2 321 2-324 179-507 (521)
26 3qan_A 1-pyrroline-5-carboxyla 100.0 1E-78 3.5E-83 593.6 32.7 320 2-322 189-516 (538)
27 3etf_A Putative succinate-semi 100.0 2.4E-78 8.4E-83 583.4 34.3 319 2-322 143-461 (462)
28 3pqa_A Lactaldehyde dehydrogen 100.0 6.6E-78 2.2E-82 581.7 33.0 313 2-322 147-464 (486)
29 2w8n_A Succinate-semialdehyde 100.0 2.5E-78 8.6E-83 585.6 28.4 318 2-321 163-485 (487)
30 1uxt_A Glyceraldehyde-3-phosph 100.0 1E-77 3.5E-82 582.8 31.2 314 2-322 174-492 (501)
31 1euh_A NADP dependent non phos 100.0 2.5E-77 8.5E-82 577.7 32.6 314 2-322 160-474 (475)
32 4dng_A Uncharacterized aldehyd 100.0 1.4E-77 4.6E-82 581.2 30.3 318 2-323 160-479 (485)
33 2j6l_A Aldehyde dehydrogenase 100.0 2.8E-77 9.5E-82 580.0 32.5 319 2-322 174-499 (500)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 7.3E-77 2.5E-81 579.1 34.2 317 2-321 190-515 (516)
35 1t90_A MMSDH, probable methylm 100.0 6.2E-77 2.1E-81 576.1 33.0 323 2-327 158-485 (486)
36 3ty7_A Putative aldehyde dehyd 100.0 1.7E-77 5.7E-82 579.6 27.6 317 2-320 156-475 (478)
37 4h7n_A Aldehyde dehydrogenase; 100.0 3.3E-76 1.1E-80 569.7 31.9 323 2-328 143-472 (474)
38 4e3x_A Delta-1-pyrroline-5-car 100.0 6.5E-76 2.2E-80 575.2 33.8 319 2-322 217-551 (563)
39 3sza_A Aldehyde dehydrogenase, 100.0 8.7E-76 3E-80 565.0 34.1 310 2-322 137-448 (469)
40 3lns_A Benzaldehyde dehydrogen 100.0 2E-73 6.9E-78 547.9 33.1 307 2-321 147-456 (457)
41 4f9i_A Proline dehydrogenase/d 100.0 2E-73 6.8E-78 586.2 33.7 320 2-322 683-1010(1026)
42 3ju8_A Succinylglutamic semial 100.0 2.8E-73 9.6E-78 551.0 31.9 312 2-322 156-471 (490)
43 2y53_A Aldehyde dehydrogenase 100.0 8E-73 2.7E-77 553.1 29.1 315 2-321 168-518 (534)
44 3haz_A Proline dehydrogenase; 100.0 7.3E-71 2.5E-75 566.0 31.9 315 2-322 666-987 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 1.3E-68 4.4E-73 522.7 26.8 307 3-323 189-518 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 5.2E-68 1.8E-72 516.5 29.1 302 3-319 156-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 3.6E-65 1.2E-69 490.7 15.9 283 2-322 141-440 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 6.9E-64 2.3E-68 482.5 18.7 300 2-323 125-450 (464)
49 1o20_A Gamma-glutamyl phosphat 100.0 2.7E-63 9.2E-68 473.4 18.9 274 2-322 140-422 (427)
50 4ghk_A Gamma-glutamyl phosphat 100.0 4E-63 1.4E-67 474.4 18.7 276 2-322 152-439 (444)
51 2h5g_A Delta 1-pyrroline-5-car 100.0 7E-63 2.4E-67 474.2 19.0 271 4-322 157-435 (463)
52 3my7_A Alcohol dehydrogenase/a 100.0 4.5E-60 1.5E-64 454.5 15.5 301 2-325 120-452 (452)
53 4gic_A HDH, histidinol dehydro 95.5 1.3 4.4E-05 40.9 18.3 230 5-318 151-399 (423)
54 1kae_A HDH, histidinol dehydro 92.1 7.3 0.00025 36.0 19.0 77 233-318 306-392 (434)
55 2fiu_A Conserved hypothetical 75.9 5.8 0.0002 28.7 5.6 23 230-252 54-76 (99)
56 1b93_A Protein (methylglyoxal 70.9 6.9 0.00024 30.8 5.3 77 33-126 50-135 (152)
57 1s7i_A Hypothetical protein PA 66.7 20 0.00069 27.0 7.0 72 176-253 31-108 (124)
58 3pzy_A MOG; ssgcid, seattle st 58.7 6.6 0.00023 31.3 3.1 52 26-78 27-80 (164)
59 1vmd_A MGS, methylglyoxal synt 56.5 8 0.00027 31.3 3.2 77 33-126 66-151 (178)
60 3lo3_A Uncharacterized conserv 55.9 19 0.00066 25.6 4.9 23 230-252 53-75 (94)
61 3hhl_A RPA0582; alpha-beta-bar 55.7 18 0.00061 28.1 5.1 64 171-251 45-109 (143)
62 2yvq_A Carbamoyl-phosphate syn 55.5 9.2 0.00031 29.6 3.4 62 33-96 61-132 (143)
63 3rfq_A Pterin-4-alpha-carbinol 52.0 7.8 0.00027 31.6 2.5 54 25-78 48-103 (185)
64 3mwd_B ATP-citrate synthase; A 51.2 1.3E+02 0.0045 26.7 11.5 85 12-102 168-264 (334)
65 2xw6_A MGS, methylglyoxal synt 50.1 8 0.00027 29.8 2.1 62 33-96 42-112 (134)
66 3iwt_A 178AA long hypothetical 49.3 26 0.00088 27.9 5.3 52 26-77 40-94 (178)
67 3v42_A Folliculin; tumor suppr 48.6 20 0.00068 30.1 4.5 66 3-76 21-86 (226)
68 1y5e_A Molybdenum cofactor bio 48.6 15 0.0005 29.3 3.6 53 25-77 30-85 (169)
69 2zfz_A Arginine repressor; DNA 46.2 46 0.0016 22.7 5.5 36 12-51 20-55 (79)
70 1b4b_A Arginine repressor; cor 45.8 44 0.0015 22.3 5.2 36 12-51 12-47 (71)
71 2pjk_A 178AA long hypothetical 42.1 14 0.00048 29.8 2.6 55 24-78 38-95 (178)
72 1xxa_A ARGR, arginine represso 40.9 35 0.0012 23.3 4.1 37 12-51 14-50 (78)
73 2p5m_A Arginine repressor; alp 39.6 43 0.0015 23.1 4.5 36 12-51 24-59 (83)
74 1wu2_A MOEA protein, molybdopt 39.6 8.6 0.00029 35.4 1.0 53 26-78 211-264 (396)
75 2bon_A Lipid kinase; DAG kinas 39.0 2E+02 0.0067 25.2 10.2 104 14-121 32-145 (332)
76 2i2c_A Probable inorganic poly 39.0 55 0.0019 28.0 6.1 88 16-121 5-94 (272)
77 1mkz_A Molybdenum cofactor bio 38.5 27 0.00091 27.8 3.7 52 26-77 28-82 (172)
78 3v4g_A Arginine repressor; vib 37.8 35 0.0012 27.6 4.2 38 11-51 115-152 (180)
79 3kbq_A Protein TA0487; structu 34.4 40 0.0014 27.0 4.1 51 26-76 23-74 (172)
80 1di6_A MOGA, molybdenum cofact 33.0 41 0.0014 27.4 4.0 52 26-77 23-79 (195)
81 2ioj_A Hypothetical protein AF 31.7 36 0.0012 25.8 3.3 45 43-87 53-97 (139)
82 2pbq_A Molybdenum cofactor bio 31.7 38 0.0013 27.0 3.6 51 26-77 25-81 (178)
83 1uz5_A MOEA protein, 402AA lon 30.6 24 0.00083 32.4 2.4 53 26-78 207-260 (402)
84 2ec4_A FAS-associated factor 1 30.3 21 0.00072 28.7 1.8 48 226-273 26-77 (178)
85 2qv7_A Diacylglycerol kinase D 30.3 1.3E+02 0.0044 26.4 7.2 102 15-121 28-141 (337)
86 3u3x_A Oxidoreductase; structu 29.7 1.6E+02 0.0055 26.0 7.8 128 5-161 41-170 (361)
87 2is8_A Molybdopterin biosynthe 29.4 26 0.00088 27.6 2.1 52 26-77 21-75 (164)
88 1b4a_A Arginine repressor; hel 29.2 87 0.003 24.3 5.1 36 12-51 90-125 (149)
89 1uuy_A CNX1, molybdopterin bio 27.2 63 0.0021 25.4 4.1 51 27-77 26-84 (167)
90 1jlj_A Gephyrin; globular alph 26.7 49 0.0017 26.8 3.4 52 26-77 34-91 (189)
91 3lap_A Arginine repressor; arg 25.8 1.2E+02 0.004 24.1 5.4 37 11-51 110-146 (170)
92 3kwp_A Predicted methyltransfe 25.0 2.7E+02 0.0091 24.1 8.1 47 5-54 80-129 (296)
93 2g2c_A Putative molybdenum cof 24.1 37 0.0013 26.8 2.1 51 27-77 26-82 (167)
94 3s1t_A Aspartokinase; ACT doma 23.3 2.8E+02 0.0094 21.9 9.1 101 22-123 25-159 (181)
95 2fts_A Gephyrin; gephyrin, neu 23.2 25 0.00087 32.5 1.1 52 26-77 208-260 (419)
96 4had_A Probable oxidoreductase 22.2 2.6E+02 0.0088 24.3 7.7 129 5-161 38-167 (350)
97 2ixa_A Alpha-N-acetylgalactosa 22.1 4.4E+02 0.015 23.8 14.8 137 6-161 35-172 (444)
98 1g8l_A Molybdopterin biosynthe 22.0 25 0.00087 32.4 0.9 52 26-77 204-256 (411)
99 2l69_A Rossmann 2X3 fold prote 21.7 1.8E+02 0.0062 20.5 5.0 43 232-274 53-98 (134)
100 4gqa_A NAD binding oxidoreduct 21.4 4E+02 0.014 23.7 9.0 89 56-160 88-176 (412)
101 2yv2_A Succinyl-COA synthetase 20.9 2.3E+02 0.0079 24.4 6.9 87 55-152 197-294 (297)
102 1u0t_A Inorganic polyphosphate 20.9 2.5E+02 0.0085 24.3 7.2 104 15-122 8-133 (307)
103 3s40_A Diacylglycerol kinase; 20.6 4E+02 0.014 22.7 10.1 102 15-119 12-122 (304)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.8e-83 Score=620.12 Aligned_cols=323 Identities=46% Similarity=0.776 Sum_probs=310.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|+++++++|+|+|++|+|+|++.+.++.|++||++|+|+||||+.+|++++
T Consensus 159 ~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (490)
T 2wme_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998889999999999999999999999999998
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 239 ~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp 318 (490)
T 2wme_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCC
Confidence 75544468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++..+++|++++|++++++|+++++||...+ ..|+|+.|||+.+++++|.+++||+||||++|++|
T Consensus 319 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 398 (490)
T 2wme_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEe
Confidence 99999999999999999999999999999999999998643 35899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++|||+++|+++|||+++|||+|.++++++++++++|.||||++....+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 399 ~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~ 478 (490)
T 2wme_A 399 DDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478 (490)
T ss_dssp SCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeE
Confidence 99999999999999999999999999999999999999999999987778899999999999999999999999999999
Q ss_pred EEEeCCC
Q 020284 318 VVTALKN 324 (328)
Q Consensus 318 i~~~~~~ 324 (328)
|++++.+
T Consensus 479 v~i~~g~ 485 (490)
T 2wme_A 479 VQVELGD 485 (490)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999754
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=7.9e-81 Score=606.25 Aligned_cols=326 Identities=38% Similarity=0.689 Sum_probs=314.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 187 ~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~ 266 (520)
T 3ed6_A 187 ASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIM 266 (520)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 267 ~~aa~~-l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p 345 (520)
T 3ed6_A 267 KNAANN-VTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNG 345 (520)
T ss_dssp HHHHTT-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCT
T ss_pred HHhhhc-CCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|
T Consensus 346 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 425 (520)
T 3ed6_A 346 FDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGF 425 (520)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEe
Confidence 99999999999999999999999999999999999998642 46899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++|||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+
T Consensus 426 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~ 505 (520)
T 3ed6_A 426 ETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKH 505 (520)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999988778999999999999999999999999999999
Q ss_pred EEEeCC--CCCCC
Q 020284 318 VVTALK--NPAWL 328 (328)
Q Consensus 318 i~~~~~--~~~~~ 328 (328)
|+++.. ...||
T Consensus 506 v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 506 ILTNTNPQLVNWF 518 (520)
T ss_dssp EEEESSCCCCCCS
T ss_pred EEEcCCCCccCcc
Confidence 999875 34565
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=8.8e-81 Score=601.93 Aligned_cols=319 Identities=41% Similarity=0.649 Sum_probs=309.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 165 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~ 244 (484)
T 3ifg_A 165 IARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLM 244 (484)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 245 ~~aa~~-~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 323 (484)
T 3ifg_A 245 AQSAPT-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG 323 (484)
T ss_dssp HHTGGG-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhcc-CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.+++++|.+++||+||||++|++|+|++
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 403 (484)
T 3ifg_A 324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEE 403 (484)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999999998655579999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 404 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 404 ELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999777789999999999999999999999999999999864
No 4
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=9.7e-81 Score=601.21 Aligned_cols=319 Identities=29% Similarity=0.470 Sum_probs=309.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++ |++||++|+|+||||+.+|+.|+
T Consensus 140 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~ 218 (484)
T 3ros_A 140 VIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVA 218 (484)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997777777 99999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 219 ~~aa~~-lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 297 (484)
T 3ros_A 219 EAAGKN-LKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDP 297 (484)
T ss_dssp HHHHHT-TCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhcc-CCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999984 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++.+++++++++|++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 298 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 377 (484)
T 3ros_A 298 LEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDN 377 (484)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHH
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHH
Confidence 99999999999999999999999999999999999998655679999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 378 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 457 (484)
T 3ros_A 378 AAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDV 457 (484)
T ss_dssp HHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEEC
Confidence 99999999999999999999999999999999999999999877789999999999999999999999999999999987
Q ss_pred C
Q 020284 322 L 322 (328)
Q Consensus 322 ~ 322 (328)
.
T Consensus 458 ~ 458 (484)
T 3ros_A 458 T 458 (484)
T ss_dssp G
T ss_pred C
Confidence 5
No 5
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=3.1e-80 Score=601.16 Aligned_cols=326 Identities=43% Similarity=0.776 Sum_probs=313.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|+.||++|+|+||||+.+|+.|+
T Consensus 168 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 247 (503)
T 3iwj_A 168 ATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM 247 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 248 ~~aa~~-l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 326 (503)
T 3iwj_A 248 TAAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDP 326 (503)
T ss_dssp HHHGGG-TCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhcC-CCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
+++++++||++++++++++++++++++++|+++++||...+ ..|+|+.|||+.+++++|.+++||+||||++|++|+|
T Consensus 327 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 406 (503)
T 3iwj_A 327 LEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFST 406 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCC
Confidence 99999999999999999999999999999999999997644 5799999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 407 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~ 486 (503)
T 3iwj_A 407 EEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486 (503)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999998777899999999999999999999999999999999
Q ss_pred EeCC--CCCCC
Q 020284 320 TALK--NPAWL 328 (328)
Q Consensus 320 ~~~~--~~~~~ 328 (328)
++.. ...||
T Consensus 487 ~~~~~~~~~~~ 497 (503)
T 3iwj_A 487 QYISEEPWGWY 497 (503)
T ss_dssp EECCSSCCCCS
T ss_pred EeCCCCccccc
Confidence 8864 34464
No 6
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.2e-80 Score=601.27 Aligned_cols=320 Identities=36% Similarity=0.580 Sum_probs=310.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 164 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~ 243 (506)
T 3rh9_A 164 IAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLI 243 (506)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 244 ~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 322 (506)
T 3rh9_A 244 VDTAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDG 322 (506)
T ss_dssp HHTTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCT
T ss_pred HHhhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCC-CCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.|+++++||+++.++++|+++++++++++|+++++||...+. .|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 323 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (506)
T 3rh9_A 323 MNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTE 402 (506)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCH
Confidence 999999999999999999999999999999999999986444 7999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 403 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~ 482 (506)
T 3rh9_A 403 EEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPR 482 (506)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999988878899999999999999999999999999999988
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
+.
T Consensus 483 ~~ 484 (506)
T 3rh9_A 483 GF 484 (506)
T ss_dssp C-
T ss_pred cC
Confidence 74
No 7
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.9e-80 Score=601.01 Aligned_cols=319 Identities=43% Similarity=0.784 Sum_probs=308.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 195 ~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~ 274 (517)
T 2o2p_A 195 LSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 274 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHh-hCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a-~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 275 ~~aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGd 353 (517)
T 2o2p_A 275 KSCALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGN 353 (517)
T ss_dssp HHHHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred HHhHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 9988 7 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC-
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD- 239 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~- 239 (328)
|+|+++++||+++.++++++++++++++++|+++++||...+..|+|+.|||+.+++++|.+++||+||||++|++|+|
T Consensus 354 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 354 PLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 9999999999999999999999999999999999999976444689999999999999999999999999999999999
Q ss_pred -hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 240 -LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 240 -~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
++|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v 513 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEE
Confidence 9999999999999999999999999999999999999999999877778999999999999999999999999999999
Q ss_pred EEe
Q 020284 319 VTA 321 (328)
Q Consensus 319 ~~~ 321 (328)
+++
T Consensus 514 ~~~ 516 (517)
T 2o2p_A 514 TFE 516 (517)
T ss_dssp EEE
T ss_pred Eee
Confidence 876
No 8
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.5e-80 Score=600.39 Aligned_cols=321 Identities=43% Similarity=0.724 Sum_probs=311.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 257 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLG 257 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 258 ~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 258 EIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCC-CCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.|+++++||+++.++++++++++++++++|+++++||...+. .|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 999999999999999999999999999999999999986543 7999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 417 DEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999988778999999999999999999999999999999998
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
+..
T Consensus 497 ~~~ 499 (528)
T 3u4j_A 497 TLG 499 (528)
T ss_dssp ESS
T ss_pred eCC
Confidence 863
No 9
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=3e-80 Score=600.04 Aligned_cols=318 Identities=40% Similarity=0.668 Sum_probs=309.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 185 ~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 264 (504)
T 3ek1_A 185 ITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLM 264 (504)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 265 ~~aa~~-lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 265 AQCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHGGG-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred Hhhhhh-cCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++.++++++++++++++++|+++++||.. ..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 421 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEE 421 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHH
Confidence 999999999999999999999999999999999999975 368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 422 eAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 422 EVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp HHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999877788999999999999999999999999999999887
Q ss_pred C
Q 020284 322 L 322 (328)
Q Consensus 322 ~ 322 (328)
+
T Consensus 502 ~ 502 (504)
T 3ek1_A 502 Y 502 (504)
T ss_dssp C
T ss_pred c
Confidence 4
No 10
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.3e-79 Score=595.77 Aligned_cols=321 Identities=59% Similarity=1.033 Sum_probs=310.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 255 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997788899999999999999999999999999
Q ss_pred HHHh-hCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a-~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 256 ~~aa~~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (501)
T 1bxs_A 256 EAAGKS-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 334 (501)
T ss_dssp HHHHHT-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred HHhhhc-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCC
Confidence 9998 6 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.|+++++||+++..+++|++++|++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 335 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 335 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 99999999999999999999999999999999999999764446899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~ 494 (501)
T 1bxs_A 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTI 494 (501)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEE
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999988
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
++.
T Consensus 495 ~~~ 497 (501)
T 1bxs_A 495 KIS 497 (501)
T ss_dssp ECS
T ss_pred ccC
Confidence 753
No 11
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=6.8e-80 Score=597.90 Aligned_cols=322 Identities=38% Similarity=0.624 Sum_probs=309.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 245 ~~aa~~-l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSAEY-MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHTTT-TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhc-CCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcc--cCC--CCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++.++++++++++++++++|+++++||.. .+. .|+|+.|||+.++++++.+++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 222 6899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+
T Consensus 404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~ 483 (497)
T 3k2w_A 404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKT 483 (497)
T ss_dssp SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEE
Confidence 99999999999999999999999999999999999999999999988878999999999999999999999999999999
Q ss_pred EEEeCCC
Q 020284 318 VVTALKN 324 (328)
Q Consensus 318 i~~~~~~ 324 (328)
|+++...
T Consensus 484 v~~~~~~ 490 (497)
T 3k2w_A 484 VYINEAE 490 (497)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9998753
No 12
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2.3e-79 Score=592.67 Aligned_cols=319 Identities=39% Similarity=0.665 Sum_probs=309.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|++++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 162 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~ 241 (481)
T 3jz4_A 162 ITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241 (481)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 242 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 320 (481)
T 3jz4_A 242 EQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDG 320 (481)
T ss_dssp HHHTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCT
T ss_pred HHHhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.|+++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 321 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 400 (481)
T 3jz4_A 321 LDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEA 400 (481)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHH
T ss_pred ccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHH
Confidence 99999999999999999999999999999999999998655568999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+|++.
T Consensus 401 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 401 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 99999999999999999999999999999999999999999877789999999999999999999999999999999875
No 13
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=6.2e-80 Score=597.53 Aligned_cols=319 Identities=34% Similarity=0.623 Sum_probs=310.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999 999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 257 ~~aa~~-~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (498)
T 4f3x_A 257 AAAAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD 335 (498)
T ss_dssp HHHHTT-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCS
T ss_pred HHHHhh-CCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCC-eEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga-~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.|+++++||+++..+++++++++++++++|+ ++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 336 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 415 (498)
T 4f3x_A 336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGK 415 (498)
T ss_dssp SGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTT
T ss_pred ccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCH
Confidence 9999999999999999999999999999999 999999865567999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 416 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~ 495 (498)
T 4f3x_A 416 DDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMI 495 (498)
T ss_dssp SCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999988778999999999999999999999999999999987
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
++
T Consensus 496 ~~ 497 (498)
T 4f3x_A 496 NH 497 (498)
T ss_dssp EC
T ss_pred eC
Confidence 63
No 14
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1e-79 Score=596.24 Aligned_cols=321 Identities=61% Similarity=1.031 Sum_probs=310.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 254 (500)
T 1o04_A 175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHh-hCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a-~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 255 ~~aa~~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 333 (500)
T 1o04_A 255 VAAGSS-NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333 (500)
T ss_dssp HHHHHT-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred Hhhhhh-cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCC
Confidence 9998 6 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.|+++++||+++..+++|+++++++++++|+++++||...+..|+|+.|||+.+++++|.+++||+||||++|++|+|+
T Consensus 334 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 99999999999999999999999999999999999999764346899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~ 493 (500)
T 1o04_A 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493 (500)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999988
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
+..
T Consensus 494 ~~~ 496 (500)
T 1o04_A 494 KVP 496 (500)
T ss_dssp ECS
T ss_pred ecC
Confidence 753
No 15
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3.9e-79 Score=591.82 Aligned_cols=315 Identities=39% Similarity=0.649 Sum_probs=303.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
++++++|||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~ 257 (497)
T 3i44_A 178 VTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS 257 (497)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ +||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 258 ~~aa~~-~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (497)
T 3i44_A 258 KNASNT-LKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG 335 (497)
T ss_dssp HHHHTT-TCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHhhc-CCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 999884 999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCc-ccC--CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.|+++++||+++++++++++++|++++++|+++++||. ... ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp TSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 99999999999999999999999999999999999994 322 269999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|++|||+++|+++|||+++|||+|.++++++++++++|+|+||. ....+.+||||+|.||+|+++|.+++++||+.|+|
T Consensus 416 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v 494 (497)
T 3i44_A 416 TEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494 (497)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEE
Confidence 99999999999999999999999999999999999999999995 55578999999999999999999999999999987
Q ss_pred E
Q 020284 319 V 319 (328)
Q Consensus 319 ~ 319 (328)
+
T Consensus 495 ~ 495 (497)
T 3i44_A 495 S 495 (497)
T ss_dssp S
T ss_pred E
Confidence 5
No 16
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-79 Score=593.42 Aligned_cols=318 Identities=40% Similarity=0.673 Sum_probs=307.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++ +.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 163 AVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999 888999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 242 ~~aa~~-l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 320 (495)
T 3b4w_A 242 RRAAEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPP 320 (495)
T ss_dssp HHHHHT-TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCT
T ss_pred HHhhhc-CCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.|+++++||+++.++++|+++++++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 321 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (495)
T 3b4w_A 321 SDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDT 400 (495)
T ss_dssp TCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCC
Confidence 99999999999999999999999999999999999997543 3689999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++ ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 401 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~ 479 (495)
T 3b4w_A 401 EEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479 (495)
T ss_dssp HHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEE
Confidence 999999999999999999999999999999999999999999987 7789999999999999999999999999999998
Q ss_pred EeC
Q 020284 320 TAL 322 (328)
Q Consensus 320 ~~~ 322 (328)
+++
T Consensus 480 ~~~ 482 (495)
T 3b4w_A 480 LPM 482 (495)
T ss_dssp CCT
T ss_pred Ecc
Confidence 875
No 17
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1e-78 Score=591.58 Aligned_cols=319 Identities=44% Similarity=0.751 Sum_probs=308.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 179 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 179 STWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997678899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 259 ~~aa~~-l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 337 (515)
T 2d4e_A 259 RNAADH-LKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP 337 (515)
T ss_dssp HHHGGG-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHhhc-CCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCc
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC--------CCCceecceeeecCCCCCcccCcceecceEE
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
.|+++++||+++.+++++++++|++++++|+++++||.... ..|+|+.|||+.+ +++|.+++||+||||++
T Consensus 338 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~ 416 (515)
T 2d4e_A 338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLV 416 (515)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEE
T ss_pred ccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceE
Confidence 99999999999999999999999999999999999997543 2689999999999 99999999999999999
Q ss_pred eEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 020284 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 313 (328)
Q Consensus 234 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~ 313 (328)
|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++...+.+||||+|.||+|+++|++++++|+
T Consensus 417 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~ 496 (515)
T 2d4e_A 417 AIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYT 496 (515)
T ss_dssp EEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHE
T ss_pred EEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred hceEEEEeC
Q 020284 314 QVKAVVTAL 322 (328)
Q Consensus 314 ~~k~i~~~~ 322 (328)
+.|+|++++
T Consensus 497 ~~K~v~~~~ 505 (515)
T 2d4e_A 497 DLKTIALPL 505 (515)
T ss_dssp EEEEEEEES
T ss_pred ceeEEEEcC
Confidence 999999875
No 18
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=6.9e-79 Score=589.08 Aligned_cols=319 Identities=36% Similarity=0.632 Sum_probs=307.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|.||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 159 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997677899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 239 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 317 (479)
T 2imp_A 239 ATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 317 (479)
T ss_dssp HHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCc
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FK-GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~-~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.| +++++||+++..+++|+++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 318 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~ 397 (479)
T 2imp_A 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397 (479)
T ss_dssp TTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred cccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence 99 99999999999999999999999999999999999753346899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
+|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 398 ~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 398 EDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 99999999999999999999999999999999999999999987767899999999999999999999999999999987
Q ss_pred e
Q 020284 321 A 321 (328)
Q Consensus 321 ~ 321 (328)
+
T Consensus 478 ~ 478 (479)
T 2imp_A 478 Q 478 (479)
T ss_dssp E
T ss_pred c
Confidence 5
No 19
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.1e-79 Score=592.85 Aligned_cols=319 Identities=41% Similarity=0.760 Sum_probs=308.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++ +.++.|++||++|+|+||||+.+|+.|+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 250 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 251 ~~aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 329 (503)
T 1a4s_A 251 EMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329 (503)
T ss_dssp HHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence 99988 49999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc--C----CCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
.|+++++||+++.++++|+++++++++++|+++++||... + ..|+|++|||+.+++++|.+++||+||||++|+
T Consensus 330 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 409 (503)
T 1a4s_A 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEE
Confidence 9999999999999999999999999999999999999754 2 358999999999999999999999999999999
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhc
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 315 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~ 315 (328)
+|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|++.
T Consensus 410 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~ 489 (503)
T 1a4s_A 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQL 489 (503)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEE
T ss_pred ecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred eEEEEeC
Q 020284 316 KAVVTAL 322 (328)
Q Consensus 316 k~i~~~~ 322 (328)
|+|++++
T Consensus 490 k~v~~~~ 496 (503)
T 1a4s_A 490 KTVIVEM 496 (503)
T ss_dssp EEEEECC
T ss_pred eEEEEcc
Confidence 9998874
No 20
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=6.8e-79 Score=591.17 Aligned_cols=315 Identities=38% Similarity=0.551 Sum_probs=304.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 169 ~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 248 (505)
T 3prl_A 169 AAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 248 (505)
T ss_dssp HHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 249 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 325 (505)
T 3prl_A 249 EKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSP 325 (505)
T ss_dssp HHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCC
Confidence 9875 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
. +++++||+++.++++++++++++++++|+++++||.. .|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 326 ~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~d 401 (505)
T 3prl_A 326 E-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDAN 401 (505)
T ss_dssp T-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred C-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHH
Confidence 9 9999999999999999999999999999999999973 58999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 402 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~ 481 (505)
T 3prl_A 402 EAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481 (505)
T ss_dssp HHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999876 46889999999999999999999999999999998
Q ss_pred eCC
Q 020284 321 ALK 323 (328)
Q Consensus 321 ~~~ 323 (328)
++.
T Consensus 482 ~~~ 484 (505)
T 3prl_A 482 NLA 484 (505)
T ss_dssp EC-
T ss_pred eCC
Confidence 864
No 21
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.9e-79 Score=596.22 Aligned_cols=319 Identities=44% Similarity=0.767 Sum_probs=308.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++ +.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 245 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVA 245 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999 788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 246 ~~aa~~-lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 324 (517)
T 3r31_A 246 AAAAGH-LKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDP 324 (517)
T ss_dssp HHHHHT-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhcC-CCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 999984 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.|+++++||+++.+++++++++|++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 325 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (517)
T 3r31_A 325 LDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD 404 (517)
T ss_dssp TSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEEC
T ss_pred CCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeC
Confidence 99999999999999999999999999999999999993122 368999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++...+.+||||+|.||+|+++|++++++||+.|+|
T Consensus 405 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v 484 (517)
T 3r31_A 405 DEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484 (517)
T ss_dssp CHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEE
T ss_pred CHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999999887789999999999999999999999999999999
Q ss_pred EEeC
Q 020284 319 VTAL 322 (328)
Q Consensus 319 ~~~~ 322 (328)
+++.
T Consensus 485 ~~~~ 488 (517)
T 3r31_A 485 YVST 488 (517)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9875
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.2e-78 Score=588.24 Aligned_cols=317 Identities=37% Similarity=0.647 Sum_probs=306.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 254 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 254 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999 999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 255 ~~aa~~-l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 333 (495)
T 1wnd_A 255 SHTASS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP 333 (495)
T ss_dssp HHHGGG-TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCT
T ss_pred HHHHhc-CCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCC-CeEeeCCc-ccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~g-a~~~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
.|+++++||+++..+++|+++++++++++| +++++||. .. ..|+|+.|||+.+++++|.+++||+||||++|++|+|
T Consensus 334 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 412 (495)
T 1wnd_A 334 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN 412 (495)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCC
Confidence 999999999999999999999999999999 99999997 43 2689999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 413 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 413 EEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999998777789999999999999999999999999999998
Q ss_pred Ee
Q 020284 320 TA 321 (328)
Q Consensus 320 ~~ 321 (328)
++
T Consensus 493 ~~ 494 (495)
T 1wnd_A 493 VK 494 (495)
T ss_dssp EE
T ss_pred ec
Confidence 75
No 23
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.9e-78 Score=589.22 Aligned_cols=323 Identities=35% Similarity=0.576 Sum_probs=292.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~-~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 568999999999999999999999999 9999999999999999999999778899999999999999999999999999
Q ss_pred HHHHhh--CCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhccc
Q 020284 81 LQLAAK--SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 158 (328)
Q Consensus 81 ~~~~a~--~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 158 (328)
++.+++ + ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 245 ~~~aa~~~~-l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 245 GELAINGGP-MKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHSSSS-CCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHhhcccC-CCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 998886 5 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 159 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 159 g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
|+|.++++++||+++.++++++++++++++++|+++++||.. .|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999974 58999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
|++||++++|+++|||+++|||+|.+.++++++++++|.|+||+++.. .+.+||||+|.||+|+++|++++++||+.|+
T Consensus 401 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp SHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999999998754 6889999999999999999999999999999
Q ss_pred EEEeC-----CCCCCC
Q 020284 318 VVTAL-----KNPAWL 328 (328)
Q Consensus 318 i~~~~-----~~~~~~ 328 (328)
|+++. .++.||
T Consensus 481 v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 481 IGIKRSAENLYFQSHH 496 (508)
T ss_dssp EEEECCSTTCCCC---
T ss_pred EEEecccchhcchhhc
Confidence 99885 467775
No 24
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.2e-78 Score=586.29 Aligned_cols=321 Identities=46% Similarity=0.777 Sum_probs=310.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~ 238 (490)
T 2ve5_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHH
Confidence 46899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHH-hhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLA-AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~-a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.+ +++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 239 ~~a~a~~-l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 239 ASASSSS-LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHHH-CCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred Hhchhcc-ccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 998 774 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC----CCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
|.|+++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++
T Consensus 318 p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~ 397 (490)
T 2ve5_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEE
Confidence 999999999999999999999999999999999999997632 3689999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++...+.+||||+|.||+|+++|.+++++|++.|
T Consensus 398 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k 477 (490)
T 2ve5_A 398 YDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477 (490)
T ss_dssp ESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeE
Confidence 99999999999999999999999999999999999999999999998877899999999999999999999999999999
Q ss_pred EEEEeCC
Q 020284 317 AVVTALK 323 (328)
Q Consensus 317 ~i~~~~~ 323 (328)
+|+++..
T Consensus 478 ~v~~~~~ 484 (490)
T 2ve5_A 478 SVQVELG 484 (490)
T ss_dssp EEEEECS
T ss_pred EEEEccC
Confidence 9998864
No 25
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-78 Score=590.93 Aligned_cols=321 Identities=30% Similarity=0.462 Sum_probs=307.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++ +.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 179 ~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~ 257 (521)
T 4e4g_A 179 PMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVY 257 (521)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999 456679999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++ ++|+|+++|+++++++++|+
T Consensus 258 ~~aa~~-lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~ 336 (521)
T 4e4g_A 258 GTAAMN-GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP 336 (521)
T ss_dssp HHHHHT-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCC
T ss_pred HHHhhc-CCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence 999884 9999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc----CCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
|.|+++++||+++.++++|++++|++++++|+++++||... ...|+|+.|||+.+++++|.+++||+||||++|++
T Consensus 337 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 416 (521)
T 4e4g_A 337 YTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVR 416 (521)
T ss_dssp TTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECC
T ss_pred CCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEE
Confidence 99999999999999999999999999999999999999742 24689999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g--~~~g~~~~~~~~ 313 (328)
|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++... .+.+||||+|.||+| +++|++++++||
T Consensus 417 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft 496 (521)
T 4e4g_A 417 ARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWT 496 (521)
T ss_dssp BSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTE
T ss_pred eCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999997654 478999999999999 799999999999
Q ss_pred hceEEEEeCCC
Q 020284 314 QVKAVVTALKN 324 (328)
Q Consensus 314 ~~k~i~~~~~~ 324 (328)
+.|+|++++..
T Consensus 497 ~~K~v~~~~~~ 507 (521)
T 4e4g_A 497 RTKTITSRWPS 507 (521)
T ss_dssp EEEEEEECCCC
T ss_pred eEEEEEEecCc
Confidence 99999988753
No 26
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1e-78 Score=593.61 Aligned_cols=320 Identities=38% Similarity=0.597 Sum_probs=307.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 189 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 268 (538)
T 3qan_A 189 MVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268 (538)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCC-----CCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~~~-----~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.++++. ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++
T Consensus 269 ~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 348 (538)
T 3qan_A 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNL 348 (538)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTC
T ss_pred HHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhc
Confidence 9988731 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
++|+|.|+++++||+++..++++++++|++++++| ++++||...+..|+|+.|||+.++++++.+++||+||||++|++
T Consensus 349 ~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 427 (538)
T 3qan_A 349 TVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427 (538)
T ss_dssp CBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred cCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEE
Confidence 99999999999999999999999999999999999 99999986544799999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEc-CCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN-~~~~~-~~~~p~gG~~~SG~g-~~~g~~~~~~~~ 313 (328)
|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+|| ++... .+.+||||+|.||+| +++|++++++||
T Consensus 428 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft 507 (538)
T 3qan_A 428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHM 507 (538)
T ss_dssp ESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 55443 789999999999999 999999999999
Q ss_pred hceEEEEeC
Q 020284 314 QVKAVVTAL 322 (328)
Q Consensus 314 ~~k~i~~~~ 322 (328)
+.|+|+++.
T Consensus 508 ~~k~v~~~~ 516 (538)
T 3qan_A 508 QAKTVSEMY 516 (538)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEec
Confidence 999999885
No 27
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.4e-78 Score=583.40 Aligned_cols=319 Identities=32% Similarity=0.506 Sum_probs=309.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
.++++++||++||+||+|||+.+|.++.+|++++.++|+|+|++|++++ +.+.+..|++||++|.|+||||+.+|+.|+
T Consensus 143 ~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 221 (462)
T 3etf_A 143 VLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIG 221 (462)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHH
Confidence 5789999999999999999999999999999999999999999999998 567788999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 222 ~~aa~~-~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 300 (462)
T 3etf_A 222 AQAGAA-LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDP 300 (462)
T ss_dssp HHHHHT-TCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHhcc-CCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCC
Confidence 999984 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 301 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~d 380 (462)
T 3etf_A 301 LVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAA 380 (462)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred ccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHH
Confidence 99999999999999999999999999999999999998666679999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~ 321 (328)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 381 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 381 HALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp HHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEe
Confidence 99999999999999999999999999999999999999999887789999999999999999999999999999999876
Q ss_pred C
Q 020284 322 L 322 (328)
Q Consensus 322 ~ 322 (328)
.
T Consensus 461 r 461 (462)
T 3etf_A 461 R 461 (462)
T ss_dssp C
T ss_pred c
Confidence 3
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=6.6e-78 Score=581.75 Aligned_cols=313 Identities=33% Similarity=0.587 Sum_probs=302.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~a----glp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
.++++++||++||+||+|||+.+|.++..+++++.++ |+|+|++|+|++++.+.++.|++||++|+|+||||+.+|
T Consensus 147 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g 226 (486)
T 3pqa_A 147 SAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVG 226 (486)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHH
Confidence 5789999999999999999999999999999999999 999999999999777889999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++++
T Consensus 227 ~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 303 (486)
T 3pqa_A 227 ELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLN 303 (486)
T ss_dssp HHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcc
Confidence 99998775 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
+|+|+|+++++||+++.++++++++++++++++|+++++||.. .|+|+.|||+ +++++|.+++||+||||++|++|
T Consensus 304 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~ 379 (486)
T 3pqa_A 304 VGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRT 379 (486)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEE
T ss_pred cCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEE
Confidence 9999999999999999999999999999999999999999974 5899999999 99999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
+| +|||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++||+.|
T Consensus 380 ~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k 458 (486)
T 3pqa_A 380 NE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIK 458 (486)
T ss_dssp CH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEE
T ss_pred cH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceE
Confidence 99 9999999999999999999999999999999999999999998653 468999999999999999999999999999
Q ss_pred EEEEeC
Q 020284 317 AVVTAL 322 (328)
Q Consensus 317 ~i~~~~ 322 (328)
+|+++.
T Consensus 459 ~v~~~~ 464 (486)
T 3pqa_A 459 TIIISK 464 (486)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999885
No 29
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.5e-78 Score=585.58 Aligned_cols=318 Identities=39% Similarity=0.620 Sum_probs=307.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~---~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
+++++++||++||+||+|||+.+|.++..|+++++++|+|+|++|+|+ +++.+.++.|++||++|+|+||||+.+|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 163 ITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 568999999999999999999999999999999999999999999999 76677889999999999999999999999
Q ss_pred HHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh-cc
Q 020284 79 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RV 157 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~-~~ 157 (328)
.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++ ++
T Consensus 243 ~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 321 (487)
T 2w8n_A 243 ILLHHAAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLR 321 (487)
T ss_dssp HHHHHHHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcc
Confidence 99999988 49999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCc-eecceeeecCCCCCcccCcceecceEEeEe
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
+|+|.++++++||+++..+++++++++++++++|+++++||... ..|+ |++|||+.++++++.+++||+||||++|++
T Consensus 322 ~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~ 400 (487)
T 2w8n_A 322 VGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIK 400 (487)
T ss_dssp BSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEE
T ss_pred cCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEE
Confidence 99999999999999999999999999999999999999999753 3588 999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 401 ~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k 480 (487)
T 2w8n_A 401 FDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELK 480 (487)
T ss_dssp ESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCcc
Confidence 99999999999999999999999999999999999999999999998777788999999999999999999999999999
Q ss_pred EEEEe
Q 020284 317 AVVTA 321 (328)
Q Consensus 317 ~i~~~ 321 (328)
+++++
T Consensus 481 ~v~~~ 485 (487)
T 2w8n_A 481 YVCYG 485 (487)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99875
No 30
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1e-77 Score=582.84 Aligned_cols=314 Identities=32% Similarity=0.509 Sum_probs=304.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++ +.++.|++||++|+|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 568999999999999999999999999999999999999999999999966 8899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9875 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCC-ceecceeeecCC---CCCcccCcceecceEEeEee
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~ 237 (328)
.|+++++||+++.++++++++++++++++|+++++||.. .| +|+.|||+.+++ ++|.+++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 57 999999999999 99999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCC-CCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 316 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k 316 (328)
+|++||++++|+++|||+++|||+|.+.++++++++++|.|+||++ ....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 407 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k 486 (501)
T 1uxt_A 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 486 (501)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCcee
Confidence 9999999999999999999999999999999999999999999997 556789999999999999999999999999999
Q ss_pred EEEEeC
Q 020284 317 AVVTAL 322 (328)
Q Consensus 317 ~i~~~~ 322 (328)
++++++
T Consensus 487 ~v~~~~ 492 (501)
T 1uxt_A 487 TIVFNY 492 (501)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999875
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.5e-77 Score=577.67 Aligned_cols=314 Identities=37% Similarity=0.542 Sum_probs=303.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 56899999999999999999999999999999999999999999999997677899999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9875 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.| ++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|++
T Consensus 317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ 392 (475)
T 1euh_A 317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 392 (475)
T ss_dssp GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHH
Confidence 99 999999999999999999999999999999999975 58999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcC-CCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 320 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~ 320 (328)
||++++|+++|||+++|||+|.++++++++++++|.|+||+ +....+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 393 eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 472 (475)
T 1euh_A 393 EAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472 (475)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEE
Confidence 99999999999999999999999999999999999999998 66567899999999999999999999999999999988
Q ss_pred eC
Q 020284 321 AL 322 (328)
Q Consensus 321 ~~ 322 (328)
++
T Consensus 473 ~~ 474 (475)
T 1euh_A 473 DI 474 (475)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 32
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.4e-77 Score=581.20 Aligned_cols=318 Identities=34% Similarity=0.546 Sum_probs=284.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~-~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
.++++++||++||+||+|||+.+|+++ ..|.+++.++|+|+|++|++++++.+.++.|++||++|+|.||||+.+|+.|
T Consensus 160 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 160 SMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 578999999999999999999999999 9999999999999999999999777789999999999999999999999999
Q ss_pred HHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCC
Q 020284 81 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 81 ~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
++.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 240 ~~~aa~~-~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 318 (485)
T 4dng_A 240 GEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGD 318 (485)
T ss_dssp HHHHHHH-TCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHhhh-ccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 9999885 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
|.|+++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 319 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 395 (485)
T 4dng_A 319 QTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSD 395 (485)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSH
T ss_pred CCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCH
Confidence 9999999999999999999999999999999999999975 5899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
+|||+++|+++|||+++|||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 396 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 396 QEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999998654 789999999999999999999999999999999
Q ss_pred EeCC
Q 020284 320 TALK 323 (328)
Q Consensus 320 ~~~~ 323 (328)
+++.
T Consensus 476 ~~~~ 479 (485)
T 4dng_A 476 IQKQ 479 (485)
T ss_dssp EEC-
T ss_pred EecC
Confidence 8864
No 33
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=2.8e-77 Score=580.02 Aligned_cols=319 Identities=29% Similarity=0.510 Sum_probs=304.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|++ +.+.++.|++||++|+|+||||+.+|
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g 252 (500)
T 2j6l_A 174 YGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVG 252 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHH
T ss_pred HHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHH
Confidence 57899999999999999999999999999888866 46999999999999 78889999999999999999999999
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+.|++.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++++
T Consensus 253 ~~i~~~aa~~-l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (500)
T 2j6l_A 253 KQVGLMVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIR 331 (500)
T ss_dssp HHHHHHHHHT-TCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhccC-CCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcc
Confidence 9999999884 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEee
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 237 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 237 (328)
+|+|.|+++++||+++..+++|+++++++++++|+++++||...+..|+|++|||+.++++++.+++||+||||++|++|
T Consensus 332 ~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (500)
T 2j6l_A 332 VGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKF 411 (500)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEE
T ss_pred cCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEee
Confidence 99999999999999999999999999999999999999999764456899999999999999999999999999999999
Q ss_pred cChhHHHHHhhcCCCCceEEEecCCHHHHHHHH--HhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhh
Q 020284 238 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQ 314 (328)
Q Consensus 238 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~ 314 (328)
+|++|||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~ 491 (500)
T 2j6l_A 412 QNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMR 491 (500)
T ss_dssp CCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhc
Confidence 999999999999999999999999999999999 779999999998654 35789999999999999999999999999
Q ss_pred ceEEEEeC
Q 020284 315 VKAVVTAL 322 (328)
Q Consensus 315 ~k~i~~~~ 322 (328)
.|++++++
T Consensus 492 ~k~v~~~~ 499 (500)
T 2j6l_A 492 RSTCTINY 499 (500)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEeC
Confidence 99998763
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=7.3e-77 Score=579.11 Aligned_cols=317 Identities=36% Similarity=0.572 Sum_probs=302.6
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 190 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~ 269 (516)
T 1uzb_A 190 FTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY 269 (516)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHh------hCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 82 QLAA------KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 82 ~~~a------~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++
T Consensus 270 ~~aa~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 348 (516)
T 1uzb_A 270 EAAGRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAER 348 (516)
T ss_dssp HHHTSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred HHhhhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHh
Confidence 9887 5 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
+++|+| ++++++||+++..+++++++++++++++| ++++||...+..|+|+.|||+.+++++|.+++||+||||++|+
T Consensus 349 ~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~ 426 (516)
T 1uzb_A 349 LSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426 (516)
T ss_dssp CCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred ccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEE
Confidence 999999 99999999999999999999999999999 8999997533468999999999999999999999999999999
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhh
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNY 312 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g-~~~g~~~~~~~ 312 (328)
+|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.+++++|
T Consensus 427 ~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f 506 (516)
T 1uzb_A 427 RVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLF 506 (516)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTT
T ss_pred EeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHc
Confidence 99999999999999999999999999999999999999999999998644 3578999999999999 57899999999
Q ss_pred hhceEEEEe
Q 020284 313 LQVKAVVTA 321 (328)
Q Consensus 313 ~~~k~i~~~ 321 (328)
++.|+|+++
T Consensus 507 ~~~k~v~~~ 515 (516)
T 1uzb_A 507 LEMKAVAER 515 (516)
T ss_dssp EEEEEEEEE
T ss_pred CCeeEEEec
Confidence 999999875
No 35
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.2e-77 Score=576.06 Aligned_cols=323 Identities=32% Similarity=0.488 Sum_probs=308.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|+|++ +.+.+..|++||++|+|.||||+.+|+.|+
T Consensus 158 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~ 236 (486)
T 1t90_A 158 PCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVY 236 (486)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999 567889999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCe-eEEcccchHHHHHHHHHHHhhcccCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~-v~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++ +|||++ +|+|+++|+++++++++|+
T Consensus 237 ~~aa~~-~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~ 314 (486)
T 1t90_A 237 KKGSEN-LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGN 314 (486)
T ss_dssp HHHHHT-TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSC
T ss_pred HHHhcc-CCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCC
Confidence 999884 9999999999999999999999999999999999999999999999 999999 9999999999999999999
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 161 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 161 ~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
|.++++++||+++..+++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+|
T Consensus 315 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~ 394 (486)
T 1t90_A 315 GLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKN 394 (486)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCC
Confidence 999999999999999999999999999999999999997432 3589999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCC--CcchHHHHHhhhhce
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG--REKGSYSLSNYLQVK 316 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g--~~~g~~~~~~~~~~k 316 (328)
++|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.+|+++|++.|
T Consensus 395 ~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k 474 (486)
T 1t90_A 395 LKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKK 474 (486)
T ss_dssp HHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999998643 3578999999999999 899999999999999
Q ss_pred EEEEeCCCCCC
Q 020284 317 AVVTALKNPAW 327 (328)
Q Consensus 317 ~i~~~~~~~~~ 327 (328)
++++++.++.+
T Consensus 475 ~v~~~~~~~~~ 485 (486)
T 1t90_A 475 VVTARYPAPDF 485 (486)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEecCCCCC
Confidence 99998877654
No 36
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.7e-77 Score=579.59 Aligned_cols=317 Identities=41% Similarity=0.726 Sum_probs=282.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..|+++++++|+|+|++|++++++.+.++.|+.||++|+|+||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~ 235 (478)
T 3ty7_A 156 TSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235 (478)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|
T Consensus 236 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 314 (478)
T 3ty7_A 236 EKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP 314 (478)
T ss_dssp CSTTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 98888 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC---CCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
.|+++++||+++.++++++++++++++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+
T Consensus 315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 99999999999999999999999999999999999994322 468999999999999999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++++++||+.|+|
T Consensus 395 ~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v 473 (478)
T 3ty7_A 395 DLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473 (478)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEE
Confidence 99999999999999999999999999999999999999999999 55678899999999999999999999999999998
Q ss_pred EE
Q 020284 319 VT 320 (328)
Q Consensus 319 ~~ 320 (328)
+.
T Consensus 474 ~~ 475 (478)
T 3ty7_A 474 AG 475 (478)
T ss_dssp ET
T ss_pred EE
Confidence 73
No 37
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=3.3e-76 Score=569.69 Aligned_cols=323 Identities=31% Similarity=0.466 Sum_probs=307.7
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++ +.+.+..|+.| +|+|.||||+.+|+.|+
T Consensus 143 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~ 219 (474)
T 4h7n_A 143 SMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVA 219 (474)
T ss_dssp HHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHH
T ss_pred HhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhh
Confidence 5789999999999999999999999999999999999999999999999 67788888876 99999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|.++++++++|+|
T Consensus 220 ~~aa~~-~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 298 (474)
T 4h7n_A 220 ETAARR-FIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298 (474)
T ss_dssp HHHHHH-TCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCS
T ss_pred hhhhcc-cccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCC
Confidence 999985 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC-CCCceecceeeecCCCCCcccCcceecceEEeEeecCh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 240 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 240 (328)
.++++++||+++..+++++++++++++++|+++++||...+ ..|+|+.|||+.++++++.+++||+||||++|++|+|+
T Consensus 299 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~ 378 (474)
T 4h7n_A 299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDV 378 (474)
T ss_dssp SGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred cccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCH
Confidence 99999999999999999999999999999999999997543 56899999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceE
Q 020284 241 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKA 317 (328)
Q Consensus 241 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g-~~~g~~~~~~~~~~k~ 317 (328)
+|||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++|++.|+
T Consensus 379 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~ 458 (474)
T 4h7n_A 379 EEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQA 458 (474)
T ss_dssp HHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEE
T ss_pred HHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEE
Confidence 999999999999999999999999999999999999999998754 3578999999999998 7899999999999999
Q ss_pred EEEeC---CCCCCC
Q 020284 318 VVTAL---KNPAWL 328 (328)
Q Consensus 318 i~~~~---~~~~~~ 328 (328)
|+++. ..|+|+
T Consensus 459 v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 459 FLIKTNSTSDPWWF 472 (474)
T ss_dssp EEEECSSSCCTTSC
T ss_pred EEECCCCCCCCCCc
Confidence 99985 467786
No 38
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=6.5e-76 Score=575.22 Aligned_cols=319 Identities=29% Similarity=0.449 Sum_probs=304.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
..++++||| +||+||||||+.+|+++..|+++|+++|+|+|+||+|++++.+.++.|++||++++|.||||+.+|+.|+
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~ 295 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW 295 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 468999999 5999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCc------ceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 82 QLAAKSNLKP------VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 82 ~~~a~~~~~~------~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+.++++ ++| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++
T Consensus 296 ~~aa~~-lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~ 374 (563)
T 4e3x_A 296 RQVAQN-LDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR 374 (563)
T ss_dssp HHHHHT-TTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred HHHHhh-CCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence 999884 774 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-CCCCccccccCCHHHHHHHHHHHHHHHh-CCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEE
Q 020284 156 RVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 156 ~~~g~~-~~~~~~~gpl~~~~~~~~~~~~l~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
+++|+| .|+++++||++++.++++++++|+++++ +|+++++||...+..|+|++|||+.++++++.+++||+||||++
T Consensus 375 l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~ 454 (563)
T 4e3x_A 375 IKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLT 454 (563)
T ss_dssp CCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEE
T ss_pred ccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEE
Confidence 999999 9999999999999999999999999996 89999999987666799999999999999999999999999999
Q ss_pred eEeecC--hhHHHHHh-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCCCCC--CCCCCccCCCCCCCC-Ccch
Q 020284 234 ILKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKG 305 (328)
Q Consensus 234 v~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g 305 (328)
|++|+| ++|||+++ |+++|||+++|||+|.+.+++++++++ +|+||||++++. .+.+||||+|.||+| +.+|
T Consensus 455 V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G 534 (563)
T 4e3x_A 455 VYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 534 (563)
T ss_dssp EEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTS
T ss_pred EEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCC
Confidence 999996 79999999 789999999999999999999999976 999999997643 578999999999998 8999
Q ss_pred HHHHHhhhhceEEEEeC
Q 020284 306 SYSLSNYLQVKAVVTAL 322 (328)
Q Consensus 306 ~~~~~~~~~~k~i~~~~ 322 (328)
++++++|++.|+|..+.
T Consensus 535 ~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 535 PHYILRWTSPQVIKETH 551 (563)
T ss_dssp TTGGGGGBCCEEEEEEC
T ss_pred HHHHHHhCceEEEEEeC
Confidence 99999999999999886
No 39
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=8.7e-76 Score=565.00 Aligned_cols=310 Identities=31% Similarity=0.463 Sum_probs=294.5
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..|++++.++ +|+|++|++++ +.+.+..|+.| ++|+|+||||+.+|+.|+
T Consensus 137 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~ 213 (469)
T 3sza_A 137 TIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTELLKE-RFDHILYTGSTGVGKIIM 213 (469)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCC-SHHHHHHHTTS-CCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEEC-CHHHHHHHHhc-CCCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999998 99999999999 44555677777 799999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++ +|+|
T Consensus 214 ~~aa~~-lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~ 291 (469)
T 3sza_A 214 TAAAKH-LTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGED 291 (469)
T ss_dssp HHHHTT-TCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSC
T ss_pred HHHhhc-cCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCC
Confidence 999884 99999999999999999999999999999999999999999999999999999999999999999998 6999
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++++++||+++.++++|+++++ +|+++++||... ..|+|+.|||+.+++++|.+++||+||||++|++|+|++
T Consensus 292 ~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 365 (469)
T 3sza_A 292 AKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLE 365 (469)
T ss_dssp GGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHH
T ss_pred CcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHH
Confidence 99999999999999999999998 589999999864 468999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 020284 242 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 319 (328)
Q Consensus 242 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~ 319 (328)
|||+++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 366 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~ 445 (469)
T 3sza_A 366 EAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCL 445 (469)
T ss_dssp HHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEE
T ss_pred HHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEE
Confidence 99999999999999999999999999999999999999999753 4689999999999999999999999999999998
Q ss_pred EeC
Q 020284 320 TAL 322 (328)
Q Consensus 320 ~~~ 322 (328)
++.
T Consensus 446 ~~~ 448 (469)
T 3sza_A 446 VRP 448 (469)
T ss_dssp ECC
T ss_pred ECC
Confidence 874
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2e-73 Score=547.88 Aligned_cols=307 Identities=29% Similarity=0.488 Sum_probs=291.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+|++ +.+.+..|++ +++|+|+||||+.+|+.|+
T Consensus 147 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~ 223 (457)
T 3lns_A 147 TLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVM 223 (457)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999 99999999999 7788899998 7899999999999999999
Q ss_pred HHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 82 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 82 ~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++++++ |
T Consensus 224 ~~aa~~-l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p 299 (457)
T 3lns_A 224 QAAAKH-LTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---P 299 (457)
T ss_dssp HHHHTT-TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---C
T ss_pred HHHhhc-cCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---C
Confidence 999884 999999999999999999999999999999999999999999999999999999999999999999988 6
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChh
Q 020284 162 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 241 (328)
Q Consensus 162 ~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 241 (328)
.++ ++||+++.++++|++++++++. +++++||... ..|+|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 300 ~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 373 (457)
T 3lns_A 300 EIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVR 373 (457)
T ss_dssp STT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHH
T ss_pred Ccc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHH
Confidence 666 9999999999999999999853 5899999753 368999999999999999999999999999999999999
Q ss_pred HHHHHhhc-CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 020284 242 EVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 318 (328)
Q Consensus 242 eai~~~n~-~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~i 318 (328)
|||+++|+ ++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|
T Consensus 374 eAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v 453 (457)
T 3lns_A 374 TAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453 (457)
T ss_dssp HHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEE
Confidence 99999999 999999999999999999999999999999999753 478999999999999999999999999999998
Q ss_pred EEe
Q 020284 319 VTA 321 (328)
Q Consensus 319 ~~~ 321 (328)
++.
T Consensus 454 ~~~ 456 (457)
T 3lns_A 454 RIV 456 (457)
T ss_dssp EEC
T ss_pred EeC
Confidence 764
No 41
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=2e-73 Score=586.17 Aligned_cols=320 Identities=33% Similarity=0.543 Sum_probs=305.9
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|++||++++|+||||+.+|+.|+
T Consensus 683 ~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~ 762 (1026)
T 4f9i_A 683 SMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRII 762 (1026)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhh-----CCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 82 QLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 82 ~~~a~-----~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
+.+++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++
T Consensus 763 ~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l 842 (1026)
T 4f9i_A 763 ERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKAT 842 (1026)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHC
T ss_pred HHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhc
Confidence 98873 2479999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
++|+|.|+++++||+++..++++++++|++++++| ++++||...+..|+|+.|||+.++++++.+++||+||||++|++
T Consensus 843 ~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 921 (1026)
T 4f9i_A 843 KVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMR 921 (1026)
T ss_dssp CBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred ccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEE
Confidence 99999999999999999999999999999999998 99999975444599999999999999999999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYL 313 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~~~~ 313 (328)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|+||||+.++. .+.+||||+|.||+| +.+|++++++|+
T Consensus 922 ~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~ 1001 (1026)
T 4f9i_A 922 AKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFM 1001 (1026)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGE
T ss_pred eCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999999997653 478999999999999 568999999999
Q ss_pred hceEEEEeC
Q 020284 314 QVKAVVTAL 322 (328)
Q Consensus 314 ~~k~i~~~~ 322 (328)
+.|+|+++.
T Consensus 1002 ~~k~v~~~~ 1010 (1026)
T 4f9i_A 1002 DPRVVTENT 1010 (1026)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 999999885
No 42
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.8e-73 Score=551.00 Aligned_cols=312 Identities=30% Similarity=0.428 Sum_probs=298.1
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|++++ +.+.++.|++||++|+|+||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 234 (490)
T 3ju8_A 156 PNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLH 234 (490)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999 678899999999999999999999999999
Q ss_pred HHHhhCCCCcc-eeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccc-hHHHHHHHHHHHhhcccC
Q 020284 82 QLAAKSNLKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVG 159 (328)
Q Consensus 82 ~~~a~~~~~~~-~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~~~~~~~~~g 159 (328)
+.++++ ++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++++++++|
T Consensus 235 ~~aa~~-~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G 313 (490)
T 3ju8_A 235 SQFGGQ-PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVG 313 (490)
T ss_dssp HHTTTC-TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBC
T ss_pred HHhhcc-CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCC
Confidence 998884 8998 7999999999999999999999999999999999999999999999996 999999999999999999
Q ss_pred C-CCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeec
Q 020284 160 D-PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 238 (328)
Q Consensus 160 ~-~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 238 (328)
+ |.|+++++||+++.++++++++++++++++|+++++||...+..|+|+.|||+. +++++.+++||+||||++|++|+
T Consensus 314 ~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~ 392 (490)
T 3ju8_A 314 RFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS 392 (490)
T ss_dssp CTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEES
T ss_pred CCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeC
Confidence 9 999999999999999999999999999999999999998666679999999999 99999999999999999999999
Q ss_pred ChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 020284 239 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 317 (328)
Q Consensus 239 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~SG~g~~~g~~~~~~~~~~k~ 317 (328)
|++||++++|+++|||+++|||+|.++++++++++++|.|+||++.. ..+.+||||+|.||.+ ++++|++.|+
T Consensus 393 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~ 466 (490)
T 3ju8_A 393 DFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADY 466 (490)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHH
T ss_pred CHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEE
Confidence 99999999999999999999999999999999999999999999765 4588999999999974 5899999999
Q ss_pred EEEeC
Q 020284 318 VVTAL 322 (328)
Q Consensus 318 i~~~~ 322 (328)
++++.
T Consensus 467 v~~~~ 471 (490)
T 3ju8_A 467 CAYPV 471 (490)
T ss_dssp HEEEE
T ss_pred EEEec
Confidence 88774
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=8e-73 Score=553.14 Aligned_cols=315 Identities=26% Similarity=0.355 Sum_probs=291.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 80 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~ag-lp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v 80 (328)
+++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|++++.+++..| +++|+|+||||+.+|+.|
T Consensus 168 ~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~~i 244 (534)
T 2y53_A 168 LWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAATL 244 (534)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHHHH
Confidence 56899999999999999999999999999999999999 89999999998544333222 579999999999999999
Q ss_pred HHHHh--hCCCCcceeccCCCCceecCCCC-----CHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 81 LQLAA--KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 81 ~~~~a--~~~~~~~~~e~gG~~~~iV~~da-----d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
++.++ + ++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++
T Consensus 245 ~~~aa~a~-~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 323 (534)
T 2y53_A 245 RAHPAFVQ-RGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKL 323 (534)
T ss_dssp HTSHHHHT-TCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHhhhhhc-CCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHH
Confidence 98764 5 599999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccC------CCCceecceeeecCCCC--CcccCc
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDD--MLIAKD 225 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~--~~~~~~ 225 (328)
+++++|+|.|+++++||++++.++++++++|+++ .+|+++++||.... ..|+|+.|||+.+++++ +.+++|
T Consensus 324 ~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~e 402 (534)
T 2y53_A 324 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDV 402 (534)
T ss_dssp TTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTC
T ss_pred HhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhC
Confidence 9999999999999999999999999999999999 68999999986421 35899999999999877 589999
Q ss_pred ceecceEEeEeec---Ch-----hHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEEcCCCC---------C
Q 020284 226 EIFGPVQSILKYK---DL-----DEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV---------F 286 (328)
Q Consensus 226 E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~---------~ 286 (328)
|+||||++|++|+ |+ +|||+++|+++|||+++|||+|.++++++++++ ++|+|+||++.. .
T Consensus 403 EiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~ 482 (534)
T 2y53_A 403 EVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482 (534)
T ss_dssp CCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCC
T ss_pred CCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCC
Confidence 9999999999999 99 999999999999999999999999999999999 899999998642 3
Q ss_pred CCCCCccCCCCCCCCCc-chHHHHHhhhhceEEEEe
Q 020284 287 DAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 321 (328)
Q Consensus 287 ~~~~p~gG~~~SG~g~~-~g~~~~~~~~~~k~i~~~ 321 (328)
.+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 483 ~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 483 MPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred CCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 57899999999999999 699999999999998764
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=7.3e-71 Score=566.01 Aligned_cols=315 Identities=30% Similarity=0.465 Sum_probs=297.8
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 81 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~ 81 (328)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+|+|++.+ +..|++||+||+|+||||+.+|+.|+
T Consensus 666 ~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~ 744 (1001)
T 3haz_A 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSIN 744 (1001)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999997777 99999999999999999999999999
Q ss_pred HHHhhC--CCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 82 QLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 82 ~~~a~~--~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
+.++++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 745 ~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vG 824 (1001)
T 3haz_A 745 RALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824 (1001)
T ss_dssp HHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCC
Confidence 988863 479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
+|.++++++||+++..++++++++|++++++| ++ +||... ..|+|+.|||+.+ +++.+++||+||||++|++|++
T Consensus 825 dp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred CcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 99999999999999999999999999999888 77 888643 4599999999974 6788999999999999999996
Q ss_pred --hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhh
Q 020284 240 --LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQ 314 (328)
Q Consensus 240 --~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~SG~g-~~~g~~~~~~~~~ 314 (328)
++|||+++|+++|||+++|||+|.+.++++++++++|+||||++... .+.+||||+|.||+| +.+|++++++|++
T Consensus 900 ~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~ 979 (1001)
T 3haz_A 900 ENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFAT 979 (1001)
T ss_dssp GGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEE
T ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhce
Confidence 79999999999999999999999999999999999999999997653 467899999999999 5789999999999
Q ss_pred ceEEEEeC
Q 020284 315 VKAVVTAL 322 (328)
Q Consensus 315 ~k~i~~~~ 322 (328)
.|+|+++.
T Consensus 980 ~K~v~~~~ 987 (1001)
T 3haz_A 980 EQTVTINT 987 (1001)
T ss_dssp EEEEEEEC
T ss_pred eeEEEECC
Confidence 99999875
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-68 Score=522.72 Aligned_cols=307 Identities=23% Similarity=0.324 Sum_probs=282.8
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l----~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
.+++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+|++++.+.++.|++||++|+|+||||+.+|+
T Consensus 189 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~ 268 (528)
T 3v4c_A 189 GGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGR 268 (528)
T ss_dssp SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHH
Confidence 389999999999999999999999999999875 4689999999999998778999999999999999999999999
Q ss_pred HHHHHHhhCCC--CcceeccCCCCceecCCCC---CHHHHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHH
Q 020284 79 IVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANAL 152 (328)
Q Consensus 79 ~v~~~~a~~~~--~~~~~e~gG~~~~iV~~da---d~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~ 152 (328)
.|++.++++ + +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++++|||++ ++|+|+++|+++
T Consensus 269 ~i~~~aa~~-~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 347 (528)
T 3v4c_A 269 ALFDLCAAR-PEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEA 347 (528)
T ss_dssp HHHHHHHHS-SSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHhhc-cCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHH
Confidence 999999884 7 8999999999999999999 88999999999999999999999999999997 999999999999
Q ss_pred HhhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCC---CcccCcceec
Q 020284 153 AMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFG 229 (328)
Q Consensus 153 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fg 229 (328)
++++++| +.+||+++..+.++++++++ ++|+++++||.. .|+|+.|||+.+++++ +.+++||+||
T Consensus 348 ~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eEiFG 415 (528)
T 3v4c_A 348 LAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFG 415 (528)
T ss_dssp HHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCCCSS
T ss_pred HHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhhcccccC
Confidence 9988654 57899998888888777763 479999999974 6899999999988777 8999999999
Q ss_pred ceEEeEeecChhHHHHHhhcCCCCceEEEecC--CHHHHHHHHHhcc--eeEEEEcCCCC---CCCCCCccC-CCCCCCC
Q 020284 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDV---FDAAIPFGG-YKQSGQG 301 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~---~~~~~p~gG-~~~SG~g 301 (328)
||++|++|+|++|||+++|+++|||+++|||+ |.+++++++++++ +|+||||++++ ..+.+|||| +|.||+|
T Consensus 416 PVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~g 495 (528)
T 3v4c_A 416 PLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNF 495 (528)
T ss_dssp SEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCT
T ss_pred CeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 8899999999998 99999999765 358999999 9999999
Q ss_pred Ccc--hHHHHHhhhhceEEEEeCC
Q 020284 302 REK--GSYSLSNYLQVKAVVTALK 323 (328)
Q Consensus 302 ~~~--g~~~~~~~~~~k~i~~~~~ 323 (328)
+++ |++|+++|+++|++ .+.+
T Consensus 496 r~~~~G~~gl~~~~~~k~~-q~~p 518 (528)
T 3v4c_A 496 GATSVGTMSIRRFLRPVAY-QNMP 518 (528)
T ss_dssp TCCSSSGGGGGGGEEEEEE-ESCC
T ss_pred CCCCCcHHHHHHhchhHHh-hcCC
Confidence 986 99999999999875 4443
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=5.2e-68 Score=516.46 Aligned_cols=302 Identities=21% Similarity=0.313 Sum_probs=280.8
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l----~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 78 (328)
++++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|++.+.+.++.|++||++|+|+||||+.+|+
T Consensus 156 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~ 235 (510)
T 1ez0_A 156 GGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGR 235 (510)
T ss_dssp SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHH
Confidence 489999999999999999999999999999988 5679999999999997778899999999999999999999999
Q ss_pred HHHHHHhhCCC--CcceeccCCCCceecCCCCCHH--HHHHHHHHHHHhhcCCCccCCCeeEEccc-chHHHHHHHHHHH
Q 020284 79 IVLQLAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALA 153 (328)
Q Consensus 79 ~v~~~~a~~~~--~~~~~e~gG~~~~iV~~dad~~--~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~ 153 (328)
.|++.++++ + +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++++|||++ ++|+|+++|++++
T Consensus 236 ~i~~~aa~~-l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~ 314 (510)
T 1ez0_A 236 ALFNLAHER-PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLI 314 (510)
T ss_dssp HHHHHHHHS-SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHhhcc-CCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHH
Confidence 999999884 5 9999999999999999999999 99999999999999999999999999999 9999999999999
Q ss_pred hhcccCCCCCCCccccccCCHHHHHHHHHHHHHHHh-CCCeEeeCCcccCCCCceecceeeecCCCC---CcccCcceec
Q 020284 154 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFG 229 (328)
Q Consensus 154 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fg 229 (328)
+++++ ||++++.+.+++.++++++++ +|+++++||. .|+|+.|||+.+++++ +.+++||+||
T Consensus 315 ~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFG 380 (510)
T 1ez0_A 315 RQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFG 380 (510)
T ss_dssp HHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCS
T ss_pred HhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccC
Confidence 98864 588889999999999999984 7999999997 2899999999887777 9999999999
Q ss_pred ceEEeEeecChhHHHHHhhcCCCCceEEEecCCH--HHHHHHHHhc--ceeEEEEcCCCC---CCCCCCccC-CCCCCCC
Q 020284 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL--DTANTLMRAL--RVGSVWINCFDV---FDAAIPFGG-YKQSGQG 301 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~--~~~~~~~~~l--~~g~v~iN~~~~---~~~~~p~gG-~~~SG~g 301 (328)
||++|++|+|++||++++|+++|||+++|||+|. ++++++++++ ++|.|+||++.. ..+.+|||| +|.||+|
T Consensus 381 PVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g 460 (510)
T 1ez0_A 381 PQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHS 460 (510)
T ss_dssp SEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCS
T ss_pred CeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCC
Confidence 9999999999999999999999999999999987 7999999999 799999998764 357899999 7999987
Q ss_pred Cc--chHHHHHhhhhceEEE
Q 020284 302 RE--KGSYSLSNYLQVKAVV 319 (328)
Q Consensus 302 ~~--~g~~~~~~~~~~k~i~ 319 (328)
+. +|.+++++|++.|++.
T Consensus 461 ~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 461 ASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCccHHHHHHhheEEEEc
Confidence 54 7999999999988764
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=3.6e-65 Score=490.66 Aligned_cols=283 Identities=17% Similarity=0.175 Sum_probs=228.0
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----H----cCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCC
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 73 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~----aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs 73 (328)
+++++++||++||+||+|||+.+|+++..+++++. + +|+|+|++|+|+ ++.+.++.|.+||++|+|+||||
T Consensus 141 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS 219 (468)
T 1vlu_A 141 IANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGS 219 (468)
T ss_dssp HHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESC
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECC
Confidence 57899999999999999999999999999999995 8 999999999999 66678899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH
Q 020284 74 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 153 (328)
Q Consensus 74 ~~~~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 153 (328)
+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++++|||+++ |+|+++|.+++
T Consensus 220 ~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~ 293 (468)
T 1vlu_A 220 NALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLT 293 (468)
T ss_dssp HHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHH
T ss_pred HHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHH
Confidence 99999998765 69999999999999999999999999999999999999 99999999999999 99999999999
Q ss_pred hhccc---CCCCCCCccccccCCHHHHHHHHHH-HHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceec
Q 020284 154 MKRVV---GDPFKGGIQQGPQIDSEQFEKILKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFG 229 (328)
Q Consensus 154 ~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~-l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 229 (328)
+++++ |+|.+ +++ +++++ ++++||. | +.||++ +++++.+++||+||
T Consensus 294 ~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFG 343 (468)
T 1vlu_A 294 LEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLS 343 (468)
T ss_dssp HHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------C
T ss_pred HhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccC
Confidence 99987 77632 344 55554 3566775 4 789997 68899999999999
Q ss_pred ceEEeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCcc-----CCCCCCCCCcc
Q 020284 230 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFG-----GYKQSGQGREK 304 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~g-----G~~~SG~g~~~ 304 (328)
||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||| |+|.||+|++
T Consensus 344 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~- 422 (468)
T 1vlu_A 344 LDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR- 422 (468)
T ss_dssp CCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC---------------------
T ss_pred ceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999987777889999 9999999999
Q ss_pred hHHHHHhhhhceEEEEeC
Q 020284 305 GSYSLSNYLQVKAVVTAL 322 (328)
Q Consensus 305 g~~~~~~~~~~k~i~~~~ 322 (328)
|++++++|++.|+++++.
T Consensus 423 G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 423 GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp --CCSGGGEEEEEEEECS
T ss_pred cchHHHHhcceEEEEECC
Confidence 999999999999998764
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=6.9e-64 Score=482.49 Aligned_cols=300 Identities=15% Similarity=0.212 Sum_probs=273.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~----~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..++ +++.++|+|+|++++|++++.+.++.|++||++|+|+||||+.+
T Consensus 125 ~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v- 203 (464)
T 3k9d_A 125 VIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM- 203 (464)
T ss_dssp HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH-
T ss_pred HHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH-
Confidence 4789999999999999999999999999865 45688999999999999987889999999999999999999985
Q ss_pred HHHHHHHhhCCCCcceeccC-CCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHH---
Q 020284 78 KIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA--- 153 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~g-G~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~--- 153 (328)
.+.+++ +++|+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|.+++++|||++++|+|+++|+++.
T Consensus 204 ---~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 278 (464)
T 3k9d_A 204 ---VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHF 278 (464)
T ss_dssp ---HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEE
T ss_pred ---HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhh
Confidence 444555 58999 7887 99999999999999999999999999999999999999999999999999999985
Q ss_pred ----hhcccCCCC-CCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCccee
Q 020284 154 ----MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIF 228 (328)
Q Consensus 154 ----~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 228 (328)
+.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||.. ++++++++ .+|+|
T Consensus 279 ~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~v~~~~~~-~~E~f 343 (464)
T 3k9d_A 279 LSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGAKIPY-SREKL 343 (464)
T ss_dssp CCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------CCSTTCGG-GSCCC
T ss_pred cChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------CCCCCCcc-ccccc
Confidence 467889887 77899999999999999999999988899999998862 35667775 48999
Q ss_pred cceEEeEeecChhHHH----HHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCC---------CCCCCCccCC
Q 020284 229 GPVQSILKYKDLDEVI----QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---------FDAAIPFGGY 295 (328)
Q Consensus 229 gPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~---------~~~~~p~gG~ 295 (328)
|||++|++|+|++||| +++|.++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||
T Consensus 344 gPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~- 422 (464)
T 3k9d_A 344 APILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC- 422 (464)
T ss_dssp SSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-
Confidence 9999999999999997 79999999999999999999999999999999999999764 468999998
Q ss_pred CCCCCCCcchHHHHHhhhhceEEEEeCC
Q 020284 296 KQSGQGREKGSYSLSNYLQVKAVVTALK 323 (328)
Q Consensus 296 ~~SG~g~~~g~~~~~~~~~~k~i~~~~~ 323 (328)
+.+|.|.++|..++++|++.|++....+
T Consensus 423 G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 423 GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 7789999999999999999999987754
No 49
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=2.7e-63 Score=473.42 Aligned_cols=274 Identities=21% Similarity=0.217 Sum_probs=248.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCC-chhHHHHhhhcCCcCeEEEeCCHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
+++++++||++||+||+|||+.+|+++..|++++. ++|+|+|++|+|++. .++.++.|..||++|+|+||||+.+
T Consensus 140 ~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~ 219 (427)
T 1o20_A 140 TVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGL 219 (427)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHH
T ss_pred HHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHH
Confidence 57899999999999999999999999999999998 679999999999984 4567888999999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++++|||++++|+|+++|+++++++
T Consensus 220 G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 294 (427)
T 1o20_A 220 ISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKH 294 (427)
T ss_dssp HHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHc
Confidence 99998876 58999999999999999999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEe
Q 020284 157 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 236 (328)
Q Consensus 157 ~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 236 (328)
+++ +.||... .+ |+ ||| +++++.+++||+||||++|++
T Consensus 295 ~~~-----------------------------------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~ 332 (427)
T 1o20_A 295 GVE-----------------------------------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKV 332 (427)
T ss_dssp TCE-----------------------------------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEE
T ss_pred CCe-----------------------------------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEE
Confidence 652 1223211 12 33 886 245788999999999999999
Q ss_pred ecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhh
Q 020284 237 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNY 312 (328)
Q Consensus 237 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g----~~~g~~~~~~~ 312 (328)
|+|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||.|.||+| +++|++++++|
T Consensus 333 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~ 412 (427)
T 1o20_A 333 VKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLREL 412 (427)
T ss_dssp ESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGG
T ss_pred ECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHH
Confidence 99999999999999999999999999999999999999999999997777788999999999987 46799999999
Q ss_pred hhceEEEEeC
Q 020284 313 LQVKAVVTAL 322 (328)
Q Consensus 313 ~~~k~i~~~~ 322 (328)
++.|+|++++
T Consensus 413 ~~~k~v~~~~ 422 (427)
T 1o20_A 413 TTYKFVVLGE 422 (427)
T ss_dssp EEEEEEEECS
T ss_pred hceEEEEECC
Confidence 9999998774
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=4e-63 Score=474.41 Aligned_cols=276 Identities=21% Similarity=0.228 Sum_probs=239.4
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCch-hHHHHhhhcCCcCeEEEeCCHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l----~~aglp~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
+++++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|++++. +.++.|..||++|+|+||||+.+
T Consensus 152 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~v 231 (444)
T 4ghk_A 152 TIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSL 231 (444)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHH
Confidence 5789999999999999999999999999999997 789999999999998554 57788889999999999999999
Q ss_pred HHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhc
Q 020284 77 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 156 (328)
Q Consensus 77 ~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 156 (328)
++.+++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++++|||++++|+|+++|+++++++
T Consensus 232 g~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 306 (444)
T 4ghk_A 232 IERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREK 306 (444)
T ss_dssp HHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHc
Confidence 99998764 68999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cc---CCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEE
Q 020284 157 VV---GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 233 (328)
Q Consensus 157 ~~---g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 233 (328)
++ |+|. ..++++++. . | ++ +++++.+++||+||||++
T Consensus 307 ~~~~~g~p~-----------------~~~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~ 346 (444)
T 4ghk_A 307 GVELRVDAD-----------------ARAVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLA 346 (444)
T ss_dssp TCEEEECHH-----------------HHHHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEE
T ss_pred CCeecCCHH-----------------HHHHHHhcc-c--------------C------cc--cCCCchhhhccccCceEE
Confidence 88 6542 135565542 1 2 22 356789999999999999
Q ss_pred eEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHH
Q 020284 234 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSL 309 (328)
Q Consensus 234 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g----~~~g~~~~ 309 (328)
|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+++...+..||||.|.||+| +++|++++
T Consensus 347 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl 426 (444)
T 4ghk_A 347 IKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGL 426 (444)
T ss_dssp EEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECG
T ss_pred EEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHH
Confidence 99999999999999999999999999999999999999999999999998877889999999999988 67899999
Q ss_pred HhhhhceEEEEeC
Q 020284 310 SNYLQVKAVVTAL 322 (328)
Q Consensus 310 ~~~~~~k~i~~~~ 322 (328)
++||+.|+|+++.
T Consensus 427 ~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 427 EGLTSLKYVVLGH 439 (444)
T ss_dssp GGGEEEEEEEEEE
T ss_pred HhhceEEEEEECC
Confidence 9999999998764
No 51
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=7e-63 Score=474.18 Aligned_cols=271 Identities=18% Similarity=0.184 Sum_probs=235.7
Q ss_pred hhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHH
Q 020284 4 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 79 (328)
Q Consensus 4 ~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~a----glp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~ 79 (328)
+++++||++||+||+|||+.+|+++..|++++.++ | |+|++|+|++ +.+.++.|++||++|+|+||||+.+|+.
T Consensus 157 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 234 (463)
T 2h5g_A 157 QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRD 234 (463)
T ss_dssp HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 68999999999999999999999999999999999 8 9999999999 7778899999999999999999999999
Q ss_pred HHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccC
Q 020284 80 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 159 (328)
Q Consensus 80 v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g 159 (328)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++++|||++++|
T Consensus 235 i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d---------------- 294 (463)
T 2h5g_A 235 IQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR---------------- 294 (463)
T ss_dssp HHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT----------------
T ss_pred HHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc----------------
Confidence 999875 699999999999999999999999999999999999 999999999999999998
Q ss_pred CCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecC
Q 020284 160 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 239 (328)
Q Consensus 160 ~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 239 (328)
||+ ++ +++++++++|++++.|+.. ...++|+ ++++.+++||+||||++|++|+|
T Consensus 295 ---------~p~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~ 348 (463)
T 2h5g_A 295 ---------TPL-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDN 348 (463)
T ss_dssp ---------SHH-----HH---HHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESS
T ss_pred ---------hHH-----HH---HHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCC
Confidence 232 23 3477778899999855432 2234442 57899999999999999999999
Q ss_pred hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhc
Q 020284 240 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQV 315 (328)
Q Consensus 240 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~SG~g--~~--~g~~~~~~~~~~ 315 (328)
++|||+++|++++||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+| ++ +|++++++|++.
T Consensus 349 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~ 428 (463)
T 2h5g_A 349 VQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTT 428 (463)
T ss_dssp HHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEE
T ss_pred HHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhcee
Confidence 99999999999999999999999999999999999999999998777789999999999999 65 899999999999
Q ss_pred eEEEEeC
Q 020284 316 KAVVTAL 322 (328)
Q Consensus 316 k~i~~~~ 322 (328)
|+|+++.
T Consensus 429 K~v~~~~ 435 (463)
T 2h5g_A 429 KWLLRGK 435 (463)
T ss_dssp EEEEECS
T ss_pred EEEEECC
Confidence 9998774
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.5e-60 Score=454.49 Aligned_cols=301 Identities=18% Similarity=0.250 Sum_probs=249.2
Q ss_pred chhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHH
Q 020284 2 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 2 ~~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~----~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~ 77 (328)
+++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|+|++++.+.++.|++||++|+|+||||+.++
T Consensus 120 ~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~ 199 (452)
T 3my7_A 120 AIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV 199 (452)
T ss_dssp HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH
T ss_pred HHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH
Confidence 56899999999999999999999999998888765 78999999999999888899999999999999999999865
Q ss_pred HHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcc
Q 020284 78 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 157 (328)
Q Consensus 78 ~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 157 (328)
+ .++. +++|+++|+|||+|+||++|||++.|++.+++++|+++||.|.+++++|||++++|+|+++|+++
T Consensus 200 ~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~----- 269 (452)
T 3my7_A 200 K----AAYS-SGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH----- 269 (452)
T ss_dssp H----HHHT-SSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT-----
T ss_pred H----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh-----
Confidence 4 3444 58999999999999999999999999999999999999999999999999999999999999873
Q ss_pred cCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCccc---CCCCceeccee-------eecCCCCCcccCcce
Q 020284 158 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTV-------FTGVKDDMLIAKDEI 227 (328)
Q Consensus 158 ~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~~~~~E~ 227 (328)
+||+++++++++++++++++...|+++ +||... ...|+|++||+ +.++++++.+.+ |+
T Consensus 270 ----------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~ 337 (452)
T 3my7_A 270 ----------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EK 337 (452)
T ss_dssp ----------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CC
T ss_pred ----------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-Cc
Confidence 599999999999999998766667776 466532 13589999997 667888888776 89
Q ss_pred ecceEEeEeecChhHHHHHhhcCC----CCceEEEecCCHHHHHH---HHHhcceeEEEEcCCCCC-----------CCC
Q 020284 228 FGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVFTHNLDTANT---LMRALRVGSVWINCFDVF-----------DAA 289 (328)
Q Consensus 228 fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~t~d~~~~~~---~~~~l~~g~v~iN~~~~~-----------~~~ 289 (328)
||||++|++|+|++||++++|++. |||+++|||+|.+.+++ +++++++|+|+||++..+ .+.
T Consensus 338 FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~ 417 (452)
T 3my7_A 338 LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPS 417 (452)
T ss_dssp SSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC---------------
T ss_pred cCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCce
Confidence 999999999999999999999985 99999999999877777 999999999999997542 122
Q ss_pred CCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCC
Q 020284 290 IPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 325 (328)
Q Consensus 290 ~p~gG~~~SG~g~~~g~~~~~~~~~~k~i~~~~~~~ 325 (328)
+++ |.+..|.+...+.-+.+++.+.|+|..+.+|+
T Consensus 418 ~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~~ 452 (452)
T 3my7_A 418 LTL-GCGSWGGNSISENVGPKHLINKKTVAKRAENM 452 (452)
T ss_dssp --------------CCCCCGGGGEEEEEEECCC---
T ss_pred Eee-eccccCCCccCCCCChhHeeeeeEEEeecCCC
Confidence 222 33444444555566778888999998887764
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=95.54 E-value=1.3 Score=40.95 Aligned_cols=230 Identities=17% Similarity=0.178 Sum_probs=122.7
Q ss_pred hhHHHHhcCCe-EE-EeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhh----cCCcCeEEEeCCHHHHH
Q 020284 5 KVGPALACGNT-IV-LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS----HMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 5 ~~~~ALaaGn~-vV-lkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~ 78 (328)
..+||-.+|+. +| .-|++. -.....+.-+.+.+|+. .+..-.|.....+|.- -|.||.|+=.|..=+..
T Consensus 151 ~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~ 225 (423)
T 4gic_A 151 NAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVAT 225 (423)
T ss_dssp HHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHH
T ss_pred hhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHH
Confidence 46789999986 33 334332 22333444455566655 3333334444445543 47799988777776643
Q ss_pred HHHHHHhhCCCCcceecc-CCCC--ceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhh
Q 020284 79 IVLQLAAKSNLKPVTLEL-GGKS--PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 155 (328)
Q Consensus 79 ~v~~~~a~~~~~~~~~e~-gG~~--~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 155 (328)
+=..... .+-..+ .|-+ .+|-++++|.+..|..++..+=+... .+.++|..+ ++|.+++.+.+.+
T Consensus 226 AKr~v~g-----~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd~~-----a~~iLvT~s--~~la~~V~~~i~~ 293 (423)
T 4gic_A 226 AKKLVFG-----QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHDED-----AQAILISPD--AAHLEAVQASIER 293 (423)
T ss_dssp HHHHHBT-----TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTCTT-----CEEEEEESC--HHHHHHHHHHHHH
T ss_pred HHHHhcC-----CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccCCC-----CeEEEEeCc--HHHHHHHHHHHHH
Confidence 2221111 122211 1222 24455678999988888866543322 344555444 3445555444432
Q ss_pred cccCCCCCCCccccccCCHHHHHHHHHHHHHHHhCCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeE
Q 020284 156 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 235 (328)
Q Consensus 156 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~l~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 235 (328)
.--. +.. .+.+++.++ -+| .++
T Consensus 294 ~l~~-----------l~r---~~i~~~sl~-----------------------------------------~~g---~ii 315 (423)
T 4gic_A 294 LLPG-----------MER---AEVIRTSLE-----------------------------------------RRG---GMI 315 (423)
T ss_dssp HGGG-----------CTT---HHHHHHHHH-----------------------------------------HHC---EEE
T ss_pred HHhh-----------Ccc---HHHHHHHHh-----------------------------------------cCc---eEE
Confidence 1100 000 111111111 011 355
Q ss_pred eecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCCCCC---------CCCCCccCCCCCCCCCcch
Q 020284 236 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWINCFDVF---------DAAIPFGGYKQSGQGREKG 305 (328)
Q Consensus 236 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~~---------~~~~p~gG~~~SG~g~~~g 305 (328)
.++|++|+++++|..-.- -+-|.++|.. .+..+++ +|.|++..+... +.-+|- +|..++.+
T Consensus 316 ~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~s 386 (423)
T 4gic_A 316 LVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSS 386 (423)
T ss_dssp ECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC----------------CCCC-----TTGGGTCC
T ss_pred EEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccC
Confidence 679999999999995432 4668888864 5677775 999999875331 234555 44556666
Q ss_pred HHHHHhhhhceEE
Q 020284 306 SYSLSNYLQVKAV 318 (328)
Q Consensus 306 ~~~~~~~~~~k~i 318 (328)
..++..|.++-++
T Consensus 387 gLsv~~F~K~~s~ 399 (423)
T 4gic_A 387 PLGVYDFQKRSSL 399 (423)
T ss_dssp CCCGGGGEEEEEE
T ss_pred CCCHHHeeeeeeE
Confidence 6777888775444
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=92.14 E-value=7.3 Score=36.04 Aligned_cols=77 Identities=21% Similarity=0.273 Sum_probs=55.0
Q ss_pred EeEeecChhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCCCC---------CCCCCCccCCCCCCCCC
Q 020284 233 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWINCFDV---------FDAAIPFGGYKQSGQGR 302 (328)
Q Consensus 233 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~---------~~~~~p~gG~~~SG~g~ 302 (328)
.++.++|++||++++|..-.- -+-|.++|.. .++.+++ +|.|++..+.. .+.-+|-+| ..+
T Consensus 306 ~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G-----~AR 376 (434)
T 1kae_A 306 RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTA 376 (434)
T ss_dssp EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGG
T ss_pred eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCCC-----cee
Confidence 466789999999999996433 4678898874 5667775 99999997643 144566655 556
Q ss_pred cchHHHHHhhhhceEE
Q 020284 303 EKGSYSLSNYLQVKAV 318 (328)
Q Consensus 303 ~~g~~~~~~~~~~k~i 318 (328)
+.+..+++.|.++-++
T Consensus 377 ~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 377 TCSSLGLADFQKRMTV 392 (434)
T ss_dssp TCCCSCGGGGEEEEEE
T ss_pred ccCCCcHHhccceeeE
Confidence 6666677788775544
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=75.94 E-value=5.8 Score=28.72 Aligned_cols=23 Identities=13% Similarity=0.420 Sum_probs=19.0
Q ss_pred ceEEeEeecChhHHHHHhhcCCC
Q 020284 230 PVQSILKYKDLDEVIQRSNASQY 252 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~ 252 (328)
+-+.|+.|+|.++|.++.|+..|
T Consensus 54 ~~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 54 ARNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHcCHHH
Confidence 37789999999999999886543
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=70.94 E-value=6.9 Score=30.83 Aligned_cols=77 Identities=22% Similarity=0.238 Sum_probs=51.0
Q ss_pred HHHHH-cCCCCCcEEEEeC-CchhHHHHhhhcCCcCeEEEeCC-------HHHHHHHHHHHhhCCCCcceeccCCCCcee
Q 020284 33 KLLHE-AGLPPGVLNIVSG-YGPTAGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFI 103 (328)
Q Consensus 33 ~~l~~-aglp~g~v~~v~~-~~~~~~~~l~~~~~v~~v~ftGs-------~~~~~~v~~~~a~~~~~~~~~e~gG~~~~i 103 (328)
+.|++ .|++-..++=++. .++.+++.+ .+-++|.|+||-+ ...+..|.+.|..+ ..|+...+
T Consensus 50 ~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~-~IP~~T~l------- 120 (152)
T 1b93_A 50 NLISRATGMNVNAMLSGPMGGDQQVGALI-SEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVW-NIPVATNV------- 120 (152)
T ss_dssp HHHHHHHCCCCEEECCGGGTHHHHHHHHH-HTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHT-TCCEESSH-------
T ss_pred HHHHHHhCceeEEEEecCCCCCchHHHHH-HCCCccEEEEcCCcccCCcccccHHHHHHHHHHc-CCCEEeCH-------
Confidence 34555 7999665543322 123455544 4557999999877 56788899988885 78887766
Q ss_pred cCCCCCHHHHHHHHHHHHHhhcC
Q 020284 104 VCEDADVDKAAELAHYALFFNQG 126 (328)
Q Consensus 104 V~~dad~~~aa~~iv~~~~~~~G 126 (328)
..|+.++.+.+++..
T Consensus 121 --------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 121 --------ATADFIIQSPHFNDA 135 (152)
T ss_dssp --------HHHHHHHTSGGGGSC
T ss_pred --------HHHHHHHHHHhcccc
Confidence 345667777666654
No 57
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=66.74 E-value=20 Score=26.98 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCCCeEeeCCcc-cCCCCcee-----cceeeecCCCCCcccCcceecceEEeEeecChhHHHHHhhc
Q 020284 176 QFEKILKYIRSGVDGGAKLETGGER-LGAKGYYI-----KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 249 (328)
Q Consensus 176 ~~~~~~~~l~~a~~~ga~~~~gg~~-~~~~g~~~-----~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 249 (328)
..+...+++++..+.|. ++.++.. ....+..+ +|+|..+.-.+ ..|..| =+.|+.++|++||++++..
T Consensus 31 ~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lg-G~~iie~~s~deA~e~A~~ 104 (124)
T 1s7i_A 31 IVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLG-GFYLIEARDLNQALQIAAK 104 (124)
T ss_dssp HHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEE-EEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Ccccce-eEEEEEeCCHHHHHHHHHh
Confidence 34555666666666664 3332221 11122222 23343332222 346665 3466788999999999988
Q ss_pred CCCC
Q 020284 250 SQYG 253 (328)
Q Consensus 250 ~~~g 253 (328)
.++.
T Consensus 105 ~P~~ 108 (124)
T 1s7i_A 105 IPPG 108 (124)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 7753
No 58
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=58.69 E-value=6.6 Score=31.29 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc--CCcCeEEEeCCHHHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 78 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~--~~v~~v~ftGs~~~~~ 78 (328)
..+..|.+++++.|...-...+++.+ +.+.+.|.+. .+.|.|+.||++..+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 35567889999999887777888876 6666666543 3689999999987543
No 59
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=56.47 E-value=8 Score=31.30 Aligned_cols=77 Identities=22% Similarity=0.211 Sum_probs=50.9
Q ss_pred HHHHH-cCCCCCcEEEEeC-CchhHHHHhhhcCCcCeEEEeCC-------HHHHHHHHHHHhhCCCCcceeccCCCCcee
Q 020284 33 KLLHE-AGLPPGVLNIVSG-YGPTAGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFI 103 (328)
Q Consensus 33 ~~l~~-aglp~g~v~~v~~-~~~~~~~~l~~~~~v~~v~ftGs-------~~~~~~v~~~~a~~~~~~~~~e~gG~~~~i 103 (328)
+.|++ .|++-..++=++. .++.+++.+ ..-++|+|+||-+ ...+..|.+.|... ..|+...+
T Consensus 66 ~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~-~IP~~Tnl------- 136 (178)
T 1vmd_A 66 ALLQEKLGLKVHRLKSGPLGGDQQIGAMI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVY-NIPVAITR------- 136 (178)
T ss_dssp HHHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHT-TCCEESSH-------
T ss_pred HHHHHHhCceeEEEeecCCCCCchHHHHH-HCCCccEEEEccCccCCCcccccHHHHHHHHHHc-CCCEEeCH-------
Confidence 44555 7999665542322 123455544 4557999999877 34568899988885 78887766
Q ss_pred cCCCCCHHHHHHHHHHHHHhhcC
Q 020284 104 VCEDADVDKAAELAHYALFFNQG 126 (328)
Q Consensus 104 V~~dad~~~aa~~iv~~~~~~~G 126 (328)
..|+.++.+.+++..
T Consensus 137 --------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 137 --------STADFLISSPLMNDV 151 (178)
T ss_dssp --------HHHHHHHHSGGGGSC
T ss_pred --------HHHHHHHHHHhcccc
Confidence 456777777777654
No 60
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=55.88 E-value=19 Score=25.59 Aligned_cols=23 Identities=17% Similarity=0.395 Sum_probs=19.6
Q ss_pred ceEEeEeecChhHHHHHhhcCCC
Q 020284 230 PVQSILKYKDLDEVIQRSNASQY 252 (328)
Q Consensus 230 Pvl~v~~~~~~~eai~~~n~~~~ 252 (328)
..+.|+.|+|.+.|.++.|+..|
T Consensus 53 ~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHH
Confidence 57899999999999999887544
No 61
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=55.69 E-value=18 Score=28.07 Aligned_cols=64 Identities=13% Similarity=0.097 Sum_probs=39.6
Q ss_pred cCCHHHHHHHHHHHHHHHh-CCCeEeeCCcccCCCCceecceeeecCCCCCcccCcceecceEEeEeecChhHHHHHhhc
Q 020284 171 QIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 249 (328)
Q Consensus 171 l~~~~~~~~~~~~l~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 249 (328)
+.+.+.+++..+.....++ -|++++..|.. +.++.+... |. ...+.|+.|+|.+.|+++.++
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT-------CC-CSEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC-------CC-CCeEEEEECCCHHHHHHHHcC
Confidence 4555566655555554444 47888876652 224443221 11 147799999999999999876
Q ss_pred CC
Q 020284 250 SQ 251 (328)
Q Consensus 250 ~~ 251 (328)
..
T Consensus 108 pe 109 (143)
T 3hhl_A 108 PV 109 (143)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 62
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=55.54 E-value=9.2 Score=29.64 Aligned_cols=62 Identities=11% Similarity=0.100 Sum_probs=41.7
Q ss_pred HHHHHcCCCCCcEEEEeCC-c----hhHHHHhhhcCCcCeEEEeCCH-----HHHHHHHHHHhhCCCCcceecc
Q 020284 33 KLLHEAGLPPGVLNIVSGY-G----PTAGAALASHMEVDKLAFTGST-----TTGKIVLQLAAKSNLKPVTLEL 96 (328)
Q Consensus 33 ~~l~~aglp~g~v~~v~~~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~~~~v~~~~a~~~~~~~~~e~ 96 (328)
+.|++.|+|-..++-++.. . +.+.+.+ .+-++++|++|-+. ..+..|.+.|-++ ..|++..+
T Consensus 61 ~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~-~IP~~T~~ 132 (143)
T 2yvq_A 61 DWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-RDGSIDLVINLPNNNTKFVHDNYVIRRTAVDS-GIPLLTNF 132 (143)
T ss_dssp HHHHHTTCCCEEECCGGGC-----CBCHHHHH-HTTSCCEEEECCCCCGGGHHHHHHHHHHHHHT-TCCEECSH
T ss_pred HHHHHcCCeEEEEEeccCCCcccccccHHHHH-HCCCceEEEECCCCCCcCCccHHHHHHHHHHh-CCCeEcCH
Confidence 3466778886666555432 2 4455544 45569999998655 4778888888885 78887766
No 63
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=52.00 E-value=7.8 Score=31.59 Aligned_cols=54 Identities=26% Similarity=0.182 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc--CCcCeEEEeCCHHHHH
Q 020284 25 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 78 (328)
Q Consensus 25 ~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~--~~v~~v~ftGs~~~~~ 78 (328)
-..+..|.+++++.|...-...+++.+.+.+.+.|.+. .+.|.|+.||++..+.
T Consensus 48 Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 48 DHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 34667889999999987666777876545555555542 5689999999988543
No 64
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=51.22 E-value=1.3e+02 Score=26.67 Aligned_cols=85 Identities=12% Similarity=-0.006 Sum_probs=49.2
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc--------hhHHHHhhhcCCcCeEEEe---CCHHHHHHH
Q 020284 12 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYG--------PTAGAALASHMEVDKLAFT---GSTTTGKIV 80 (328)
Q Consensus 12 aGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~--------~~~~~~l~~~~~v~~v~ft---Gs~~~~~~v 80 (328)
.|+.-++.=| -..+..+...+.+.|+. +=.+|.-.+ .+..+.+.++|+.+.|... |+... +.+
T Consensus 168 ~G~vgivSqS---G~l~~~i~~~~~~~g~G--~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~~~ 241 (334)
T 3mwd_B 168 PGSVAYVSRS---GGMSNELNNIISRTTDG--VYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-YKI 241 (334)
T ss_dssp CCSEEEEESC---HHHHHHHHHHHHHHSSC--EEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-HHH
T ss_pred CCCEEEEeCc---hHHHHHHHHHHHhcCCC--eEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-HHH
Confidence 4555555422 22344455556666653 334444322 2345677889999999975 45554 555
Q ss_pred HHHHhh-CCCCcceeccCCCCce
Q 020284 81 LQLAAK-SNLKPVTLELGGKSPF 102 (328)
Q Consensus 81 ~~~~a~-~~~~~~~~e~gG~~~~ 102 (328)
++.+.+ +..||++.-..|++..
T Consensus 242 ~~~~r~~~~~KPVV~~kaGrs~~ 264 (334)
T 3mwd_B 242 CRGIKEGRLTKPIVCWCIGTCAT 264 (334)
T ss_dssp HHHHHTTSCCSCEEEEEECTTCC
T ss_pred HHHHHhhcCCCCEEEEEcCCCcc
Confidence 555443 2368988887777654
No 65
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=50.05 E-value=8 Score=29.77 Aligned_cols=62 Identities=16% Similarity=0.169 Sum_probs=41.0
Q ss_pred HHHHH-cCCCCCcEEEEe-CCchhHHHHhhhcCCcCeEEEeCC-------HHHHHHHHHHHhhCCCCcceecc
Q 020284 33 KLLHE-AGLPPGVLNIVS-GYGPTAGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLEL 96 (328)
Q Consensus 33 ~~l~~-aglp~g~v~~v~-~~~~~~~~~l~~~~~v~~v~ftGs-------~~~~~~v~~~~a~~~~~~~~~e~ 96 (328)
+.|++ .|++-..++=++ +.++.+++.+ .+-++|.|+||-+ ...+..|.+.|..+ ..|+...+
T Consensus 42 ~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~-~IP~~T~l 112 (134)
T 2xw6_A 42 RRIEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVH-GVPLATNP 112 (134)
T ss_dssp HHHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHH-TCCEECSH
T ss_pred HHHHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcccCCCccchHHHHHHHHHHc-CCCeEcCH
Confidence 44555 799976665444 3234555555 4557999999977 23557788888775 67877665
No 66
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=49.30 E-value=26 Score=27.92 Aligned_cols=52 Identities=27% Similarity=0.123 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh---hcCCcCeEEEeCCHHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA---SHMEVDKLAFTGSTTTG 77 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~---~~~~v~~v~ftGs~~~~ 77 (328)
..+..|++.|.+.|+.--...+++.+.+.+..++. ...+.|.|+.||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 45678999999999876666777664344544443 34568999999998744
No 67
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=48.65 E-value=20 Score=30.14 Aligned_cols=66 Identities=14% Similarity=0.170 Sum_probs=45.7
Q ss_pred hhhhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHH
Q 020284 3 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 76 (328)
Q Consensus 3 ~~~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~ 76 (328)
...++..+..||-||+|.+. +.....+..+|... +|.+.+++++. +.+ ....-....+.++.+...
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~-s~~----Y~~~~~cnilgls~~v~i 86 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPY-SSQ----YEEAYRCNFLGLSPHVQI 86 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEE-ESS----CCCTTTCSEEEECTTCCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhcccc-chh----hcchhheeeecCCCCccc
Confidence 35788999999999999654 45556667888888 99999999876 222 122234666666655443
No 68
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=48.58 E-value=15 Score=29.28 Aligned_cols=53 Identities=25% Similarity=0.221 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc---CCcCeEEEeCCHHHH
Q 020284 25 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 77 (328)
Q Consensus 25 ~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~---~~v~~v~ftGs~~~~ 77 (328)
-..+..|.+.|++.|+..-...+++.+.+.+.+.|.+. .+.|.|+.||++..+
T Consensus 30 Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 30 DKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred cChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 34567789999999987666677776444555555432 268999999998754
No 69
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=46.16 E-value=46 Score=22.71 Aligned_cols=36 Identities=33% Similarity=0.569 Sum_probs=29.3
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020284 12 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 51 (328)
Q Consensus 12 aGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~ 51 (328)
++|-+|+|-.|-. +..++.++.+..+|+ ++..|.|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999987555 678888888887765 89988884
No 70
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=45.79 E-value=44 Score=22.31 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=29.2
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020284 12 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 51 (328)
Q Consensus 12 aGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~ 51 (328)
++|-+|+|-.|-. +..++.++.+.++|+ ++..+.|+
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 6899999987555 678888888887765 89999884
No 71
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=42.12 E-value=14 Score=29.76 Aligned_cols=55 Identities=24% Similarity=0.107 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc---CCcCeEEEeCCHHHHH
Q 020284 24 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTGK 78 (328)
Q Consensus 24 ~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~---~~v~~v~ftGs~~~~~ 78 (328)
--..+..|++.+++.|...-...+++.+-+.+.+.|.+. .+.|.|+.||++..+.
T Consensus 38 ~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 38 VDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred eehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 344667889999999987666667776545555555432 2489999999987543
No 72
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=40.87 E-value=35 Score=23.32 Aligned_cols=37 Identities=24% Similarity=0.465 Sum_probs=30.5
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020284 12 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 51 (328)
Q Consensus 12 aGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~ 51 (328)
++|-+|+|-.|-. +..++.++.+.+.+++++..+.|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 6899999977554 678888888877888899999884
No 73
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=39.62 E-value=43 Score=23.12 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=29.3
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020284 12 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 51 (328)
Q Consensus 12 aGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~ 51 (328)
++|-+|+|-.|-. +..++.++...++|+ ++..+.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999987555 678888998886665 89999884
No 74
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=39.60 E-value=8.6 Score=35.38 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhh-cCCcCeEEEeCCHHHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS-HMEVDKLAFTGSTTTGK 78 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~-~~~v~~v~ftGs~~~~~ 78 (328)
..+..|.+.+++.|...-.+.+++.+.+.+.+.|.+ ..+.|.|+.||+...+.
T Consensus 211 sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 211 TNSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 455678999999998666666776643444444432 12489999999999865
No 75
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=39.01 E-value=2e+02 Score=25.15 Aligned_cols=104 Identities=19% Similarity=0.157 Sum_probs=61.8
Q ss_pred CeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeC--Cch--hHHHHhhhcCCcCeEEEeCCHHHHHHHHHHHhhC--
Q 020284 14 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG--YGP--TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-- 87 (328)
Q Consensus 14 n~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~--~~~--~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~-- 87 (328)
-.+|++|..........+.+.|++.|.. +.+... .++ +....+.. .+.|.|+..|+..|...+.....+.
T Consensus 32 ~~vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~ 107 (332)
T 2bon_A 32 SLLILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEG 107 (332)
T ss_dssp EEEEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCS
T ss_pred EEEEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhccc
Confidence 3477888654434455677788888775 444432 221 11222222 3479999999999999999987621
Q ss_pred -CCCcce-eccCCCC-cee-cCCCCCHHHHHHHHHHHH
Q 020284 88 -NLKPVT-LELGGKS-PFI-VCEDADVDKAAELAHYAL 121 (328)
Q Consensus 88 -~~~~~~-~e~gG~~-~~i-V~~dad~~~aa~~iv~~~ 121 (328)
...|+. +-+|--| -+- +.-..|++.+++.++.+.
T Consensus 108 ~~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~ 145 (332)
T 2bon_A 108 DDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGD 145 (332)
T ss_dssp SCCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSE
T ss_pred CCCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCC
Confidence 245543 3355334 221 221457888888887543
No 76
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=38.97 E-value=55 Score=28.01 Aligned_cols=88 Identities=16% Similarity=0.084 Sum_probs=54.4
Q ss_pred EEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHHHHHhhC-CCCcce-
Q 020284 16 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVT- 93 (328)
Q Consensus 16 vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~-~~~~~~- 93 (328)
+|.+|.+.+......+.+.|++.|+.- ...+.|.|+.-|+..|-..+.+..... ..+|++
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 566765444455555666677766431 024589999999999999888877652 146744
Q ss_pred eccCCCCceecCCCCCHHHHHHHHHHHH
Q 020284 94 LELGGKSPFIVCEDADVDKAAELAHYAL 121 (328)
Q Consensus 94 ~e~gG~~~~iV~~dad~~~aa~~iv~~~ 121 (328)
..+|-.+.+-=....|++.+++.+..+.
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 4555433211112457888888887553
No 77
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=38.48 E-value=27 Score=27.84 Aligned_cols=52 Identities=23% Similarity=0.162 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhh---cCCcCeEEEeCCHHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTG 77 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~---~~~v~~v~ftGs~~~~ 77 (328)
..+..|++.|++.|+..-...+++.+.+.+.+.|.+ ..+.|.|+.||++..+
T Consensus 28 ~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 28 TSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred ccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 355678999999998665566776644455555543 2248999999998754
No 78
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=37.76 E-value=35 Score=27.57 Aligned_cols=38 Identities=24% Similarity=0.445 Sum_probs=31.7
Q ss_pred hcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020284 11 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 51 (328)
Q Consensus 11 aaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~ 51 (328)
.++|-+|+|..|-+ +..++.++...++|++++..|.|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 36999999987655 578888888888999999999884
No 79
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=34.39 E-value=40 Score=26.95 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc-CCcCeEEEeCCHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGSTTT 76 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~-~~v~~v~ftGs~~~ 76 (328)
..+..|++.|.+.|+..-...+++.+...+.+.|.+. .+.|.|+.||+...
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~ 74 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGP 74 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSS
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcC
Confidence 4567889999999988776777876444455555331 23788888887764
No 80
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=33.04 E-value=41 Score=27.44 Aligned_cols=52 Identities=13% Similarity=0.050 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHcCCC--CCcEEEEeCCchhHHHHhhh---cCCcCeEEEeCCHHHH
Q 020284 26 LSALYVSKLLHEAGLP--PGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTG 77 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp--~g~v~~v~~~~~~~~~~l~~---~~~v~~v~ftGs~~~~ 77 (328)
..+..|.+.|++.|.. .-...+++.+.+.+.+.|.+ ..+.|.|+.||++..+
T Consensus 23 ~n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g 79 (195)
T 1di6_A 23 KGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPA 79 (195)
T ss_dssp CHHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred hHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 3566789999999876 33456677644455555543 2358999999998743
No 81
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=31.69 E-value=36 Score=25.80 Aligned_cols=45 Identities=18% Similarity=0.118 Sum_probs=29.3
Q ss_pred CcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHHHHHhhC
Q 020284 43 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 87 (328)
Q Consensus 43 g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~ 87 (328)
|.+++++|+..+.-....+.+++..|++||+...-..+.+.+.+.
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~ 97 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEER 97 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHC
Confidence 568888785444433333325688888888877777777666553
No 82
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=31.67 E-value=38 Score=27.04 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=34.9
Q ss_pred HHHHHHHHHHH---HcCCCCCcEEEEeCCchhHHHHhhhc---CCcCeEEEeCCHHHH
Q 020284 26 LSALYVSKLLH---EAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 77 (328)
Q Consensus 26 ~t~~~l~~~l~---~aglp~g~v~~v~~~~~~~~~~l~~~---~~v~~v~ftGs~~~~ 77 (328)
..+..|+++++ +.|+.. ...+++.+.+.+.+.|.+. .+.|.|+.||++..+
T Consensus 25 sn~~~l~~~l~~l~~~G~~v-~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 25 ISGKAIIDYLKDVIITPFEV-EYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHHHHHBCSCCEE-EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred chHHHHHHHHHHHHhCCCEE-EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 45567888888 788876 5667766444555555432 268999999998744
No 83
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=30.61 E-value=24 Score=32.41 Aligned_cols=53 Identities=11% Similarity=0.142 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc-CCcCeEEEeCCHHHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGSTTTGK 78 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~-~~v~~v~ftGs~~~~~ 78 (328)
..+..|.+.+++.|...-.+.+++.+.+.+.+.|.+. .+.|.|+.||+...+.
T Consensus 207 sN~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlVittGG~s~g~ 260 (402)
T 1uz5_A 207 INGRALCDAINELGGEGIFMGVARDDKESLKALIEKAVNVGDVVVISGGASGGT 260 (402)
T ss_dssp CHHHHHHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHHCSEEEEECCC----
T ss_pred chHHHHHHHHHhCCCeEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEcCCCCCCC
Confidence 3556788999999987666667776444444444331 2489999999998764
No 84
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.31 E-value=21 Score=28.72 Aligned_cols=48 Identities=13% Similarity=0.164 Sum_probs=31.8
Q ss_pred ceecceEEeEeecChhHHHHHh----hcCCCCceEEEecCCHHHHHHHHHhc
Q 020284 226 EIFGPVQSILKYKDLDEVIQRS----NASQYGLAAGVFTHNLDTANTLMRAL 273 (328)
Q Consensus 226 E~fgPvl~v~~~~~~~eai~~~----n~~~~gl~~~v~t~d~~~~~~~~~~l 273 (328)
|.||+..+..--.++++|++.+ .+...-|-.++++......+.|.+.+
T Consensus 26 ~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~ 77 (178)
T 2ec4_A 26 SRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQM 77 (178)
T ss_dssp HHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHT
T ss_pred HHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHh
Confidence 4455544433345889999998 67666788899987765555555443
No 85
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=30.26 E-value=1.3e+02 Score=26.41 Aligned_cols=102 Identities=13% Similarity=0.009 Sum_probs=60.3
Q ss_pred eEEEeCCCC---ChHHHHHHHHHHHHcCCCCCcEEEEeCCch-h---HHHHhhhcCCcCeEEEeCCHHHHHHHHHHH--h
Q 020284 15 TIVLKTAEQ---TPLSALYVSKLLHEAGLPPGVLNIVSGYGP-T---AGAALASHMEVDKLAFTGSTTTGKIVLQLA--A 85 (328)
Q Consensus 15 ~vVlkps~~---~~~t~~~l~~~l~~aglp~g~v~~v~~~~~-~---~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~--a 85 (328)
.+|+.|... +......+.+.|++.|+. +.+...... + ....+. ..+.|.|+..|+..|...+.... .
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~-~~~~d~vvv~GGDGTv~~v~~~l~~~ 103 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYE---TSAYATEKIGDATLEAERAM-HENYDVLIAAGGDGTLNEVVNGIAEK 103 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHT-TTTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHh-hcCCCEEEEEcCchHHHHHHHHHHhC
Confidence 477787654 223456678888888764 344433221 1 122222 24579999999999999999887 3
Q ss_pred hCCCCcc-eeccCCCCc-eec-CCCCCHHHHHHHHHHHH
Q 020284 86 KSNLKPV-TLELGGKSP-FIV-CEDADVDKAAELAHYAL 121 (328)
Q Consensus 86 ~~~~~~~-~~e~gG~~~-~iV-~~dad~~~aa~~iv~~~ 121 (328)
.. ..|+ ++-+|--|- +=. .-..|++.+++.+..+.
T Consensus 104 ~~-~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~ 141 (337)
T 2qv7_A 104 PN-RPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGH 141 (337)
T ss_dssp SS-CCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTC
T ss_pred CC-CCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCC
Confidence 32 3443 334443222 222 22457888888887653
No 86
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=29.66 E-value=1.6e+02 Score=26.04 Aligned_cols=128 Identities=11% Similarity=0.036 Sum_probs=71.8
Q ss_pred hhHHHHhcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHHHHH
Q 020284 5 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 84 (328)
Q Consensus 5 ~~~~ALaaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~ 84 (328)
..+++|...+.-|+--....+..+..+++ +.|.+ .+. . ..+.|.+++++|.|+..-.+..-..+...+
T Consensus 41 ~~~~~~~~~~~~lvav~d~~~~~a~~~a~---~~~~~----~~~-~----~~~~ll~~~~vD~V~I~tp~~~H~~~~~~a 108 (361)
T 3u3x_A 41 GQVNCLLRAGARLAGFHEKDDALAAEFSA---VYADA----RRI-A----TAEEILEDENIGLIVSAAVSSERAELAIRA 108 (361)
T ss_dssp HHHHHHHHTTCEEEEEECSCHHHHHHHHH---HSSSC----CEE-S----CHHHHHTCTTCCEEEECCCHHHHHHHHHHH
T ss_pred HHHHHhhcCCcEEEEEEcCCHHHHHHHHH---HcCCC----ccc-C----CHHHHhcCCCCCEEEEeCChHHHHHHHHHH
Confidence 34566654444444444445544444433 33321 222 1 135677788999999999999888888888
Q ss_pred hhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEE-cccchH-HHHHHHHHHHhhcccCCC
Q 020284 85 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV-HESVYD-QFVEKANALAMKRVVGDP 161 (328)
Q Consensus 85 a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V-~~~~~~-~f~~~l~~~~~~~~~g~~ 161 (328)
.+. .|+|++|-.- ..+++.+ +.++... ...|. .+.| +...++ .....+++.+.+=++|++
T Consensus 109 l~a-GkhVl~EKPl--------a~~~~ea-~~l~~~a-~~~g~------~l~v~~~~R~~~p~~~~~k~~i~~g~iG~i 170 (361)
T 3u3x_A 109 MQH-GKDVLVDKPG--------MTSFDQL-AKLRRVQ-AETGR------IFSILYSEHFESPATVKAGELVAAGAIGEV 170 (361)
T ss_dssp HHT-TCEEEEESCS--------CSSHHHH-HHHHHHH-HTTCC------CEEEECHHHHTCHHHHHHHHHHHTTTTSSE
T ss_pred HHC-CCeEEEeCCC--------CCCHHHH-HHHHHHH-HHcCC------EEEEechHhhCCHHHHHHHHHHHcCCCCCe
Confidence 775 6788777631 1245554 3344333 23332 2333 333354 666777887776555543
No 87
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=29.41 E-value=26 Score=27.65 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc---CCcCeEEEeCCHHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 77 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~---~~v~~v~ftGs~~~~ 77 (328)
..+..|++.|++.|...-...+++.+.+.+.+.|.+. .+.|.|+.||++..+
T Consensus 21 ~n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 75 (164)
T 2is8_A 21 TTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA 75 (164)
T ss_dssp CHHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3556788899998876555667766444555555432 258999999998754
No 88
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=29.21 E-value=87 Score=24.29 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=29.3
Q ss_pred cCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020284 12 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 51 (328)
Q Consensus 12 aGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~ 51 (328)
++|-+|+|..|-+ +..++.++...++|. ++..|.|+
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGD 125 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 125 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999987555 678888888887765 89999884
No 89
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=27.23 E-value=63 Score=25.38 Aligned_cols=51 Identities=16% Similarity=0.066 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHc-----CCCCCcEEEEeCCchhHHHHhhhc---CCcCeEEEeCCHHHH
Q 020284 27 SALYVSKLLHEA-----GLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 77 (328)
Q Consensus 27 t~~~l~~~l~~a-----glp~g~v~~v~~~~~~~~~~l~~~---~~v~~v~ftGs~~~~ 77 (328)
.+..+.+++.+. |...-...+++.+-+++.+.|.+. .+.|.|+.||++..+
T Consensus 26 n~~~l~~~l~~~~~~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 84 (167)
T 1uuy_A 26 SGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFT 84 (167)
T ss_dssp HHHHHHHHHHHTTTTTTSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred cHHHHHHHHHhccccCCCcEEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 345677777776 665545566766444555566543 468999999998744
No 90
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=26.69 E-value=49 Score=26.76 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHH---cCCCCCcEEEEeCCchhHHHHhhhc---CCcCeEEEeCCHHHH
Q 020284 26 LSALYVSKLLHE---AGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 77 (328)
Q Consensus 26 ~t~~~l~~~l~~---aglp~g~v~~v~~~~~~~~~~l~~~---~~v~~v~ftGs~~~~ 77 (328)
..+..|.+.|++ .|...-...+++.+.+.+.+.|.+. .+.|.|+.||++..+
T Consensus 34 ~n~~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g 91 (189)
T 1jlj_A 34 RSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFA 91 (189)
T ss_dssp HHHHHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred hHHHHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCC
Confidence 455678888887 6665555566766444555555442 268999999998754
No 91
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=25.75 E-value=1.2e+02 Score=24.15 Aligned_cols=37 Identities=32% Similarity=0.544 Sum_probs=29.6
Q ss_pred hcCCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 020284 11 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 51 (328)
Q Consensus 11 aaGn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~ 51 (328)
.+||-+|+|..|-+ +..++.++...++| +++..|.|+
T Consensus 110 ~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 110 DSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 36999999987655 57888888888766 789988884
No 92
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=25.00 E-value=2.7e+02 Score=24.07 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=30.1
Q ss_pred hhHHHHhcCCeEEEe---CCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchh
Q 020284 5 KVGPALACGNTIVLK---TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPT 54 (328)
Q Consensus 5 ~~~~ALaaGn~vVlk---ps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~ 54 (328)
.+...+..|..|++- ..|.-.-....+.+.+.+.|++ +.++||.+.-
T Consensus 80 ~li~~l~~G~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~---v~viPGiSA~ 129 (296)
T 3kwp_A 80 QLIAKLKQGMQIAQVSDAGMPSISDPGHELVNACIDAHIP---VVPLPGANAG 129 (296)
T ss_dssp HHHHHHHTTCEEEEECSSBCTTSSHHHHHHHHHHHHTTCC---EEECCCCCHH
T ss_pred HHHHHHhcCceEEEeccCCCCCCCCCchHHHHHHHHcCCC---eeeCCCcccc
Confidence 455566667655443 2344445566788888888887 8889985433
No 93
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=24.08 E-value=37 Score=26.80 Aligned_cols=51 Identities=16% Similarity=0.042 Sum_probs=32.1
Q ss_pred HHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHhhhc--CCcCeEEEeCCHHHH
Q 020284 27 SALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTG 77 (328)
Q Consensus 27 t~~~l~~~----l~~aglp~g~v~~v~~~~~~~~~~l~~~--~~v~~v~ftGs~~~~ 77 (328)
.+..|++. +++.|...-...+++.+.+.+.+.|.+. .+.|.|+.||+...+
T Consensus 26 n~~~l~~~~~~~l~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~ 82 (167)
T 2g2c_A 26 ALPLLQRLMSDELQDYSYELISEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIR 82 (167)
T ss_dssp HHHHHHHHHCC----CEEEEEEEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHhHHhHHHHCCCEEeEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 45678888 8988876555667766444555555442 148999999998743
No 94
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=23.29 E-value=2.8e+02 Score=21.90 Aligned_cols=101 Identities=16% Similarity=0.133 Sum_probs=59.8
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEE--------------E-EeCCchhHHHHhhh-------------cCCcCeEEEeC-
Q 020284 22 EQTPLSALYVSKLLHEAGLPPGVLN--------------I-VSGYGPTAGAALAS-------------HMEVDKLAFTG- 72 (328)
Q Consensus 22 ~~~~~t~~~l~~~l~~aglp~g~v~--------------~-v~~~~~~~~~~l~~-------------~~~v~~v~ftG- 72 (328)
+..|-....+.+.|.++|+.-+.+. + ++..+.+....+.+ .+++..|...|
T Consensus 25 ~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~~a~~~L~~~~~el~~~~v~~~~~va~VsvVG~ 104 (181)
T 3s1t_A 25 PDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPAAVEKLDSLRNEIGFSQLLYDDHIGKVSLIGA 104 (181)
T ss_dssp ESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHHHHHHHHHHTHHHHCCSEEEEESCEEEEEEEEE
T ss_pred CCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHHHHHHHHHHHHHhcCcceEEEeCCEEEEEEEec
Confidence 4556677788888999887776553 2 22211111111111 24577777665
Q ss_pred ----CHHHHHHHHHHHhhCCCCcce-eccCCCCceecCCCCCHHHHHHHHHHHHHh
Q 020284 73 ----STTTGKIVLQLAAKSNLKPVT-LELGGKSPFIVCEDADVDKAAELAHYALFF 123 (328)
Q Consensus 73 ----s~~~~~~v~~~~a~~~~~~~~-~e~gG~~~~iV~~dad~~~aa~~iv~~~~~ 123 (328)
.+.....+.+..++. ..++. ......+-.+|-+..|.++|++.+-...+.
T Consensus 105 gm~~~~Gvaa~~f~aLa~~-~InI~~IstSei~Is~vV~~~d~~~Av~aLH~~f~l 159 (181)
T 3s1t_A 105 GMRSHPGVTATFCEALAAV-GVNIELISTSEIRISVLCRDTELDKAVVALHEAFGL 159 (181)
T ss_dssp CCTTCHHHHHHHHHHHHHT-TCCCCEEEEETTEEEEEEEGGGHHHHHHHHHHHHTC
T ss_pred ccccCchHHHHHHHHHHHC-CCcEEEEEcCCCEEEEEEeHHHHHHHHHHHHHHHcC
Confidence 355666666666664 33332 235566777788888888888877555443
No 95
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=23.20 E-value=25 Score=32.46 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc-CCcCeEEEeCCHHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGSTTTG 77 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~-~~v~~v~ftGs~~~~ 77 (328)
..+..|.+++++.|...-.+.+++.+.+.+.+.|.+. .+.|.|+.||+...+
T Consensus 208 sN~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlVittGG~s~g 260 (419)
T 2fts_A 208 SNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMG 260 (419)
T ss_dssp CHHHHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHHHHCSEEEEESCCSSS
T ss_pred CchHHHHHHHHHCCCEEEEEeecCCCHHHHHHHHHHHHhcCCEEEEcCCCcCC
Confidence 3556789999999987666777776444444444331 247999999998754
No 96
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=22.25 E-value=2.6e+02 Score=24.28 Aligned_cols=129 Identities=17% Similarity=0.062 Sum_probs=72.9
Q ss_pred hhHHHHhc-CCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHHHH
Q 020284 5 KVGPALAC-GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 83 (328)
Q Consensus 5 ~~~~ALaa-Gn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~ 83 (328)
+.+++|.. .+.-|+--....+..+..++ ++.|+|. +. . + .+.|.+++++|.|+..-.+..-..+...
T Consensus 38 ~~~~~~~~~~~~~lvav~d~~~~~a~~~a---~~~g~~~----~y-~-d---~~ell~~~~iDaV~I~tP~~~H~~~~~~ 105 (350)
T 4had_A 38 NVVPAIQDAENCVVTAIASRDLTRAREMA---DRFSVPH----AF-G-S---YEEMLASDVIDAVYIPLPTSQHIEWSIK 105 (350)
T ss_dssp THHHHHHHCSSEEEEEEECSSHHHHHHHH---HHHTCSE----EE-S-S---HHHHHHCSSCSEEEECSCGGGHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEEECCCHHHHHHHH---HHcCCCe----ee-C-C---HHHHhcCCCCCEEEEeCCCchhHHHHHH
Confidence 35677764 45555444455555444444 4446652 22 2 1 4567788999999998888888888887
Q ss_pred HhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 84 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 84 ~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
+.+. .|+|++|-+= -. +++.+ +.++...- ..|.. ..+-+...+..-...+++.+.+=++|++
T Consensus 106 al~a-GkhVl~EKPl----a~----~~~ea-~~l~~~a~-~~~~~-----l~v~~~~R~~p~~~~~k~~i~~G~iG~i 167 (350)
T 4had_A 106 AADA-GKHVVCEKPL----AL----KAGDI-DAVIAARD-RNKVV-----VTEAYMITYSPVWQKVRSLIDEGAIGSL 167 (350)
T ss_dssp HHHT-TCEEEECSCC----CS----SGGGG-HHHHHHHH-HHTCC-----EEECCGGGGSHHHHHHHHHHHTTTTSSE
T ss_pred HHhc-CCEEEEeCCc----cc----chhhH-HHHHHHHH-HcCCc-----eeEeeeeecCHHHHHhhHhhhcCCCCcc
Confidence 7775 7888888641 11 22222 22322222 22321 1222334456666777787776555543
No 97
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=22.13 E-value=4.4e+02 Score=23.84 Aligned_cols=137 Identities=13% Similarity=0.070 Sum_probs=77.5
Q ss_pred hHHHHhc-CCeEEEeCCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhcCCcCeEEEeCCHHHHHHHHHHH
Q 020284 6 VGPALAC-GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 84 (328)
Q Consensus 6 ~~~ALaa-Gn~vVlkps~~~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~ 84 (328)
.+++|.. .+.-|+--....+..+..+++.+.+.|+|. ..+..+ +.+..+.|.+++++|.|+.+-.+.....+...+
T Consensus 35 h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~--~~~~~~-~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~a 111 (444)
T 2ixa_A 35 HVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKP--AKVFGN-GNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAA 111 (444)
T ss_dssp HHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCC--CEEECS-STTTHHHHTTCTTCCEEEECCCGGGHHHHHHHH
T ss_pred HHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCC--Cceecc-CCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHH
Confidence 4556654 344344344555666667777676667763 233432 122346677888999999988787777777777
Q ss_pred hhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCeeEEcccchHHHHHHHHHHHhhcccCCC
Q 020284 85 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 161 (328)
Q Consensus 85 a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 161 (328)
.+. .|.|++|-. + ..+++.+. .++... ...|..| .+.+...++.....+++.+.+=.+|+.
T Consensus 112 l~a-GkhV~~EKP----~----a~~~~ea~-~l~~~a-~~~g~~~-----~v~~~~r~~p~~~~~~~~i~~G~iG~i 172 (444)
T 2ixa_A 112 MKA-GKIVGMEVS----G----AITLEECW-DYVKVS-EQTGVPL-----MALENVCYRRDVMAILNMVRKGMFGEL 172 (444)
T ss_dssp HHT-TCEEEECCC----C----CSSHHHHH-HHHHHH-HHHCCCE-----EECCGGGGCHHHHHHHHHHHTTTTCSE
T ss_pred HHC-CCeEEEeCC----C----cCCHHHHH-HHHHHH-HHhCCeE-----EEEeccccCHHHHHHHHHHHcCCCCCe
Confidence 664 678888742 1 12455543 333333 2334332 222333455555667777765555543
No 98
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=21.97 E-value=25 Score=32.36 Aligned_cols=52 Identities=21% Similarity=0.217 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhc-CCcCeEEEeCCHHHH
Q 020284 26 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGSTTTG 77 (328)
Q Consensus 26 ~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~~-~~v~~v~ftGs~~~~ 77 (328)
..+..|..++++.|...-.+.+++.+.+.+.+.|.+. .+.|.|+.||+.+.+
T Consensus 204 sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~al~~a~~~~DlvittGG~s~g 256 (411)
T 1g8l_A 204 TNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVG 256 (411)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEECSSSCSS
T ss_pred CchHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhcCCEEEECCCCCCC
Confidence 3556789999999986666677776444454554331 258999999998644
No 99
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.68 E-value=1.8e+02 Score=20.50 Aligned_cols=43 Identities=9% Similarity=0.179 Sum_probs=31.7
Q ss_pred EEeEeecC---hhHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc
Q 020284 232 QSILKYKD---LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 274 (328)
Q Consensus 232 l~v~~~~~---~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~ 274 (328)
+.++.++| .+.|++++...+...-.-||..|..+.++|.+.++
T Consensus 53 ivvvvvddkewaekairfvkslgaqvliiiydqdqnrleefsrevr 98 (134)
T 2l69_A 53 IVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVR 98 (134)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHHHHHHH
Confidence 34445555 35778888887777667788899999999888775
No 100
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=21.44 E-value=4e+02 Score=23.70 Aligned_cols=89 Identities=16% Similarity=0.063 Sum_probs=56.9
Q ss_pred HHHhhhcCCcCeEEEeCCHHHHHHHHHHHhhCCCCcceeccCCCCceecCCCCCHHHHHHHHHHHHHhhcCCCccCCCee
Q 020284 56 GAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 135 (328)
Q Consensus 56 ~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gG~~~~iV~~dad~~~aa~~iv~~~~~~~Gq~C~~~~~v 135 (328)
.+.|++++++|.|+..-.+..-..+...+.+. .|.|++|-.- ..+++.+-+ ++...- ..|..+ .
T Consensus 88 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~a-GkhVl~EKP~--------a~~~~ea~~-l~~~a~-~~g~~~-----~ 151 (412)
T 4gqa_A 88 WRELVNDPQVDVVDITSPNHLHYTMAMAAIAA-GKHVYCEKPL--------AVNEQQAQE-MAQAAR-RAGVKT-----M 151 (412)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHHHHHHHHHHT-TCEEEEESCS--------CSSHHHHHH-HHHHHH-HHTCCE-----E
T ss_pred HHHHhcCCCCCEEEECCCcHHHHHHHHHHHHc-CCCeEeecCC--------cCCHHHHHH-HHHHHH-HhCCee-----e
Confidence 45677889999999988888888888878775 7888888642 124555433 333322 344322 3
Q ss_pred EEcccchHHHHHHHHHHHhhcccCC
Q 020284 136 FVHESVYDQFVEKANALAMKRVVGD 160 (328)
Q Consensus 136 ~V~~~~~~~f~~~l~~~~~~~~~g~ 160 (328)
+-+...+......+++.+.+=.+|+
T Consensus 152 v~~~~R~~p~~~~~k~~i~~G~iG~ 176 (412)
T 4gqa_A 152 VAFNNIKTPAALLAKQIIARGDIGE 176 (412)
T ss_dssp EECGGGTSHHHHHHHHHHHHTTTCS
T ss_pred eccceecCHHHHHHHHHHhcCCcCC
Confidence 3344556666777777777644443
No 101
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=20.93 E-value=2.3e+02 Score=24.43 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=45.9
Q ss_pred HHHHhhhcCCcCeEEEeCCH-----HHHHHHHHHHhhCCCCcceeccCCCCcee---cCCCCCHH---HHHHHHHHHHHh
Q 020284 55 AGAALASHMEVDKLAFTGST-----TTGKIVLQLAAKSNLKPVTLELGGKSPFI---VCEDADVD---KAAELAHYALFF 123 (328)
Q Consensus 55 ~~~~l~~~~~v~~v~ftGs~-----~~~~~v~~~~a~~~~~~~~~e~gG~~~~i---V~~dad~~---~aa~~iv~~~~~ 123 (328)
..+.+.++|+++.|...+-. ..++...+.. . ..||++.--.|++..- .....-+- .--..+..++|.
T Consensus 197 ~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~~~-~-~~KPVv~~k~G~s~~~~~~~sHtgal~~~~~g~~~~~~aa~~ 274 (297)
T 2yv2_A 197 ALKLFQEDPQTEALVLIGEIGGDMEERAAEMIKKG-E-FTKPVIAYIAGRTAPPEKRMGHAGAIIMMGTGTYEGKVKALR 274 (297)
T ss_dssp HHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHHTT-S-CCSCEEEEESCCC------------------CSHHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhc-c-CCCCEEEEEeCCCCccccccCCccccccCCCCCHHHHHHHHH
Confidence 44666789999999987653 1244444322 2 3689998888877610 00000010 001334556666
Q ss_pred hcCCCccCCCeeEEcccchHHHHHHHHHH
Q 020284 124 NQGQCCCAGSRTFVHESVYDQFVEKANAL 152 (328)
Q Consensus 124 ~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 152 (328)
.+| +++.++. +++.+.+++.
T Consensus 275 ~aG--------v~~v~~~-~el~~~~~~~ 294 (297)
T 2yv2_A 275 EAG--------VEVAETP-FEVPELVRKA 294 (297)
T ss_dssp TTT--------CEEESSG-GGHHHHHHHH
T ss_pred HcC--------CeEeCCH-HHHHHHHHHH
Confidence 777 5555555 5566655543
No 102
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=20.89 E-value=2.5e+02 Score=24.25 Aligned_cols=104 Identities=18% Similarity=0.170 Sum_probs=56.2
Q ss_pred eEEEeCCCC-ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhH----------------HHHh----hhcCCcCeEEEeCC
Q 020284 15 TIVLKTAEQ-TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTA----------------GAAL----ASHMEVDKLAFTGS 73 (328)
Q Consensus 15 ~vVlkps~~-~~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~----------------~~~l----~~~~~v~~v~ftGs 73 (328)
.+|.||... .......+.+.|++.|+. +.+........ ...+ ....+.|.|+.-|+
T Consensus 8 ~iI~n~~~~~~~~~~~~l~~~L~~~g~~---v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~~GG 84 (307)
T 1u0t_A 8 LLVVHTGRDEATETARRVEKVLGDNKIA---LRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGG 84 (307)
T ss_dssp EEEESSSGGGGSHHHHHHHHHHHTTTCE---EEEEC-----------------------------------CCCEEEEEC
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHCCCE---EEEecchhhhhhcccccccccccccccccccccccccccCCCEEEEEeC
Confidence 356777543 344566777888887753 22222111110 0111 12235799999999
Q ss_pred HHHHHHHHHHHhhCCCCcce-eccCCCCceecCCCCCHHHHHHHHHHHHH
Q 020284 74 TTTGKIVLQLAAKSNLKPVT-LELGGKSPFIVCEDADVDKAAELAHYALF 122 (328)
Q Consensus 74 ~~~~~~v~~~~a~~~~~~~~-~e~gG~~~~iV~~dad~~~aa~~iv~~~~ 122 (328)
..+-....+..... .+|++ ..+|..+-+-=....|++.+++.+..+.+
T Consensus 85 DGT~l~a~~~~~~~-~~pvlgi~~G~~gfl~~~~~~~~~~~~~~i~~g~~ 133 (307)
T 1u0t_A 85 DGTFLRAAELARNA-SIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDY 133 (307)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEEECSSCCSSCSEEGGGHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHhccC-CCCEEEEeCCCCccCcccCHHHHHHHHHHHHcCCc
Confidence 99999888877654 46654 34433321111123578889988887543
No 103
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.61 E-value=4e+02 Score=22.74 Aligned_cols=102 Identities=13% Similarity=0.006 Sum_probs=58.3
Q ss_pred eEEEeCCCCC---hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhh--cCCcCeEEEeCCHHHHHHHHHHHhhC-C
Q 020284 15 TIVLKTAEQT---PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS--HMEVDKLAFTGSTTTGKIVLQLAAKS-N 88 (328)
Q Consensus 15 ~vVlkps~~~---~~t~~~l~~~l~~aglp~g~v~~v~~~~~~~~~~l~~--~~~v~~v~ftGs~~~~~~v~~~~a~~-~ 88 (328)
.+|+.|.... ......+.+.|++.|.. +.+........+..+.+ ..+.|.|+..|+..|...+....... .
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~---~~~~~t~~~~~a~~~~~~~~~~~d~vv~~GGDGTl~~v~~~l~~~~~ 88 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPD---LHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFECTNGLAPLEI 88 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSE---EEEEECCSTTHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHTTCSS
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCe---EEEEEccCcchHHHHHHHhhcCCCEEEEEccchHHHHHHHHHhhCCC
Confidence 4677886543 23445677788888765 34443322222222221 23689999999999999998876551 1
Q ss_pred CCcc-eeccC-CCCcee-cCCCCCHHHHHHHHHH
Q 020284 89 LKPV-TLELG-GKSPFI-VCEDADVDKAAELAHY 119 (328)
Q Consensus 89 ~~~~-~~e~g-G~~~~i-V~~dad~~~aa~~iv~ 119 (328)
..|+ ++-+| ||.-+- +.-..|++.+++.+..
T Consensus 89 ~~~l~iiP~Gt~N~~ar~lg~~~~~~~a~~~i~~ 122 (304)
T 3s40_A 89 RPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITK 122 (304)
T ss_dssp CCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHTT
T ss_pred CCcEEEecCCcHHHHHHHcCCCccHHHHHHHHHh
Confidence 2343 23334 332221 2223488888887764
Done!