Query 020285
Match_columns 328
No_of_seqs 248 out of 1411
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 08:31:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020285.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020285hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03017 trehalose-phosphatase 100.0 4.1E-69 8.9E-74 507.8 34.3 310 11-320 53-365 (366)
2 PLN02151 trehalose-phosphatase 100.0 3.3E-68 7.1E-73 500.3 33.1 311 4-321 42-352 (354)
3 PLN02580 trehalose-phosphatase 100.0 4.8E-68 1E-72 504.6 33.4 310 11-320 55-383 (384)
4 PRK10187 trehalose-6-phosphate 100.0 2.6E-39 5.7E-44 298.1 29.1 232 67-318 14-248 (266)
5 PF02358 Trehalose_PPase: Treh 100.0 5.4E-41 1.2E-45 304.1 16.5 225 71-304 1-235 (235)
6 TIGR00685 T6PP trehalose-phosp 100.0 2E-38 4.4E-43 288.9 27.2 236 65-314 1-243 (244)
7 COG1877 OtsB Trehalose-6-phosp 100.0 3.9E-38 8.5E-43 286.7 24.8 246 57-318 7-256 (266)
8 PLN02205 alpha,alpha-trehalose 100.0 6.4E-37 1.4E-41 319.0 23.4 244 57-317 585-848 (854)
9 PLN03063 alpha,alpha-trehalose 100.0 5.2E-35 1.1E-39 304.3 30.8 252 56-318 495-788 (797)
10 PRK14501 putative bifunctional 100.0 6.1E-35 1.3E-39 303.1 29.5 239 56-315 480-725 (726)
11 PLN03064 alpha,alpha-trehalose 100.0 5.5E-34 1.2E-38 296.4 30.2 252 56-318 579-931 (934)
12 PRK10513 sugar phosphate phosp 100.0 2.3E-30 5E-35 238.6 19.9 221 67-314 3-268 (270)
13 COG0561 Cof Predicted hydrolas 100.0 2.4E-30 5.3E-35 237.9 19.9 223 66-315 2-262 (264)
14 PRK10976 putative hydrolase; P 100.0 4E-30 8.7E-35 236.6 20.4 219 67-314 2-264 (266)
15 PRK15126 thiamin pyrimidine py 100.0 4E-30 8.6E-35 237.6 18.2 220 67-315 2-263 (272)
16 PRK03669 mannosyl-3-phosphogly 100.0 4.6E-29 9.9E-34 230.6 23.2 227 66-316 6-270 (271)
17 PRK01158 phosphoglycolate phos 100.0 1.5E-29 3.3E-34 227.5 19.5 213 67-314 3-229 (230)
18 PLN02887 hydrolase family prot 100.0 2.1E-28 4.5E-33 245.6 19.8 227 59-314 300-579 (580)
19 TIGR01484 HAD-SF-IIB HAD-super 100.0 6.7E-29 1.5E-33 219.6 14.1 197 69-287 1-204 (204)
20 PF08282 Hydrolase_3: haloacid 100.0 4.4E-28 9.6E-33 218.4 18.1 211 70-310 1-254 (254)
21 PRK10530 pyridoxal phosphate ( 100.0 1.5E-27 3.2E-32 219.7 19.7 223 67-314 3-271 (272)
22 TIGR01485 SPP_plant-cyano sucr 100.0 3.4E-27 7.4E-32 215.5 19.0 228 67-313 1-246 (249)
23 TIGR01482 SPP-subfamily Sucros 100.0 2.3E-27 4.9E-32 212.6 15.6 211 70-313 1-224 (225)
24 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.2E-26 2.6E-31 212.7 20.1 219 69-314 1-256 (256)
25 TIGR01487 SPP-like sucrose-pho 99.9 4E-27 8.6E-32 210.2 16.5 207 68-310 2-215 (215)
26 TIGR02471 sucr_syn_bact_C sucr 99.9 5.3E-27 1.1E-31 212.4 15.4 217 69-313 1-234 (236)
27 TIGR00099 Cof-subfamily Cof su 99.9 1.4E-26 3E-31 212.0 17.3 212 69-310 1-256 (256)
28 PRK00192 mannosyl-3-phosphogly 99.9 9.7E-25 2.1E-29 202.0 22.5 225 67-315 4-271 (273)
29 KOG1050 Trehalose-6-phosphate 99.9 1.6E-24 3.5E-29 220.8 23.2 228 58-311 493-731 (732)
30 TIGR02463 MPGP_rel mannosyl-3- 99.9 8.5E-25 1.8E-29 195.8 15.8 195 69-287 1-220 (221)
31 PLN02382 probable sucrose-phos 99.9 2.4E-24 5.1E-29 209.8 19.6 239 64-323 6-269 (413)
32 PTZ00174 phosphomannomutase; P 99.9 6E-24 1.3E-28 194.0 19.1 193 65-277 3-224 (247)
33 PLN02423 phosphomannomutase 99.9 3E-23 6.5E-28 189.1 21.3 211 64-314 4-244 (245)
34 PRK14502 bifunctional mannosyl 99.9 1.6E-21 3.6E-26 195.8 24.0 233 64-314 413-690 (694)
35 PF05116 S6PP: Sucrose-6F-phos 99.9 2.2E-23 4.8E-28 190.2 9.7 223 66-312 1-244 (247)
36 PRK12702 mannosyl-3-phosphogly 99.9 3.5E-21 7.6E-26 176.5 18.4 230 68-319 2-299 (302)
37 TIGR02461 osmo_MPG_phos mannos 99.9 7E-22 1.5E-26 178.0 13.1 197 69-288 1-225 (225)
38 KOG1050 Trehalose-6-phosphate 99.8 1.2E-23 2.6E-28 214.5 -21.3 306 13-319 128-467 (732)
39 COG3769 Predicted hydrolase (H 99.7 1.7E-15 3.8E-20 131.7 16.2 204 66-290 6-237 (274)
40 KOG3189 Phosphomannomutase [Li 99.5 1.2E-12 2.6E-17 112.3 16.2 193 63-276 7-229 (252)
41 PF03332 PMM: Eukaryotic phosp 99.3 1.6E-11 3.5E-16 108.1 13.4 189 94-315 1-220 (220)
42 TIGR02468 sucrsPsyn_pln sucros 99.3 2.3E-11 4.9E-16 128.6 14.8 189 66-274 769-992 (1050)
43 TIGR01670 YrbI-phosphatas 3-de 99.3 2.5E-11 5.3E-16 103.0 8.8 72 238-317 76-152 (154)
44 PRK09484 3-deoxy-D-manno-octul 99.2 7.2E-11 1.6E-15 103.0 7.5 56 238-301 96-153 (183)
45 PRK11133 serB phosphoserine ph 99.0 1.8E-10 3.9E-15 109.0 4.5 66 237-311 247-316 (322)
46 cd01427 HAD_like Haloacid deha 98.9 2.7E-09 5.8E-14 86.2 7.7 55 69-123 1-59 (139)
47 smart00775 LNS2 LNS2 domain. T 98.7 3.2E-08 6.9E-13 84.2 6.3 72 69-140 1-90 (157)
48 TIGR02726 phenyl_P_delta pheny 98.5 1.2E-07 2.7E-12 81.6 4.0 71 238-316 82-157 (169)
49 COG1778 Low specificity phosph 98.4 1.2E-07 2.6E-12 79.1 2.0 73 236-316 81-158 (170)
50 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.4 6.9E-06 1.5E-10 75.1 13.0 65 68-138 2-75 (249)
51 TIGR01689 EcbF-BcbF capsule bi 98.3 1E-06 2.2E-11 72.0 5.5 52 68-119 2-55 (126)
52 TIGR01684 viral_ppase viral ph 98.2 2.8E-06 6E-11 78.6 7.3 73 64-139 123-201 (301)
53 PHA03398 viral phosphatase sup 98.0 1.8E-05 3.9E-10 73.3 6.9 72 64-140 125-204 (303)
54 PRK06769 hypothetical protein; 97.9 0.00011 2.5E-09 63.3 9.9 48 67-114 4-54 (173)
55 PRK10671 copA copper exporting 97.7 0.00024 5.1E-09 75.8 11.6 62 238-311 700-765 (834)
56 TIGR01525 ATPase-IB_hvy heavy 97.6 0.00032 7E-09 71.5 10.3 59 63-123 360-420 (556)
57 COG0560 SerB Phosphoserine pho 97.5 0.00014 3.1E-09 64.9 5.3 48 236-291 142-189 (212)
58 TIGR01681 HAD-SF-IIIC HAD-supe 97.5 0.00017 3.8E-09 59.0 5.3 55 68-122 1-64 (128)
59 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.4 0.00015 3.2E-09 66.7 4.6 64 239-310 181-254 (257)
60 TIGR01662 HAD-SF-IIIA HAD-supe 97.4 0.00015 3.2E-09 59.3 4.2 47 68-114 1-51 (132)
61 TIGR01664 DNA-3'-Pase DNA 3'-p 97.4 0.00031 6.6E-09 60.3 5.9 50 66-115 12-69 (166)
62 TIGR01497 kdpB K+-transporting 97.4 0.001 2.2E-08 68.9 10.6 134 63-310 422-560 (675)
63 TIGR01672 AphA HAD superfamily 97.4 0.00044 9.6E-09 62.7 6.7 68 47-114 42-140 (237)
64 TIGR01512 ATPase-IB2_Cd heavy 97.3 0.0011 2.3E-08 67.4 9.5 61 238-310 413-478 (536)
65 PRK10444 UMP phosphatase; Prov 97.3 0.0003 6.6E-09 64.3 4.7 48 68-121 2-50 (248)
66 PF06437 ISN1: IMP-specific 5' 97.2 0.026 5.7E-07 53.9 17.2 196 58-266 137-378 (408)
67 PLN02645 phosphoglycolate phos 97.2 0.00046 1E-08 65.1 5.3 65 239-311 232-308 (311)
68 TIGR01452 PGP_euk phosphoglyco 97.1 0.00064 1.4E-08 63.1 5.1 44 68-117 3-47 (279)
69 PRK11033 zntA zinc/cadmium/mer 97.1 0.0023 5E-08 67.5 9.6 60 238-310 617-680 (741)
70 TIGR00338 serB phosphoserine p 97.1 0.00032 6.9E-09 62.3 2.7 59 238-304 152-211 (219)
71 TIGR00213 GmhB_yaeD D,D-heptos 96.9 0.0008 1.7E-08 58.0 3.6 61 239-307 108-175 (176)
72 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.8 0.0013 2.7E-08 57.3 4.2 45 238-290 147-191 (201)
73 TIGR01533 lipo_e_P4 5'-nucleot 96.8 0.0021 4.5E-08 59.4 5.6 81 38-118 45-148 (266)
74 PRK13222 phosphoglycolate phos 96.8 0.0031 6.6E-08 56.0 6.2 67 238-312 150-223 (226)
75 TIGR01488 HAD-SF-IB Haloacid D 96.7 0.001 2.2E-08 56.7 2.3 40 232-275 137-176 (177)
76 COG4030 Uncharacterized protei 96.6 0.0094 2E-07 53.1 8.1 47 236-287 189-235 (315)
77 PRK11009 aphA acid phosphatase 96.6 0.0036 7.7E-08 56.9 5.6 33 48-80 43-76 (237)
78 TIGR01511 ATPase-IB1_Cu copper 96.6 0.0077 1.7E-07 61.5 8.4 67 229-310 448-518 (562)
79 TIGR01490 HAD-SF-IB-hyp1 HAD-s 96.6 0.0024 5.3E-08 55.8 4.1 46 236-289 153-198 (202)
80 TIGR01522 ATPase-IIA2_Ca golgi 96.6 0.023 4.9E-07 61.3 12.2 161 63-310 499-670 (884)
81 PF08645 PNK3P: Polynucleotide 96.4 0.0029 6.3E-08 53.9 3.5 44 68-111 1-52 (159)
82 PRK13582 thrH phosphoserine ph 96.4 0.0035 7.7E-08 54.9 4.1 65 238-314 132-199 (205)
83 smart00577 CPDc catalytic doma 96.4 0.0062 1.3E-07 51.0 5.4 58 66-123 1-79 (148)
84 PHA02530 pseT polynucleotide k 96.4 0.0086 1.9E-07 55.8 6.7 59 65-123 156-222 (300)
85 TIGR01116 ATPase-IIA1_Ca sarco 96.3 0.0055 1.2E-07 66.2 5.7 66 229-309 612-681 (917)
86 TIGR01668 YqeG_hyp_ppase HAD s 96.3 0.011 2.3E-07 50.8 6.4 52 66-121 24-77 (170)
87 TIGR01656 Histidinol-ppas hist 96.3 0.0045 9.7E-08 51.7 3.9 46 69-114 2-53 (147)
88 PF13344 Hydrolase_6: Haloacid 96.3 0.0045 9.8E-08 48.5 3.6 44 70-119 1-45 (101)
89 PLN02954 phosphoserine phospha 96.3 0.0088 1.9E-07 53.2 5.9 67 236-310 153-223 (224)
90 TIGR01657 P-ATPase-V P-type AT 96.2 0.026 5.6E-07 62.0 10.2 62 227-303 781-842 (1054)
91 TIGR01663 PNK-3'Pase polynucle 96.2 0.01 2.2E-07 59.9 6.3 74 42-115 139-224 (526)
92 TIGR01652 ATPase-Plipid phosph 96.1 0.033 7.2E-07 61.1 10.5 69 228-314 748-819 (1057)
93 PRK13225 phosphoglycolate phos 96.1 0.012 2.7E-07 54.5 6.2 70 238-315 196-272 (273)
94 TIGR02137 HSK-PSP phosphoserin 96.1 0.0071 1.5E-07 53.6 4.2 65 236-312 130-197 (203)
95 PRK13288 pyrophosphatase PpaX; 96.0 0.019 4.1E-07 50.7 6.9 67 238-312 139-212 (214)
96 TIGR01261 hisB_Nterm histidino 96.0 0.0061 1.3E-07 52.0 3.4 48 67-114 1-55 (161)
97 COG1778 Low specificity phosph 96.0 0.0091 2E-07 50.2 4.3 57 66-123 7-70 (170)
98 TIGR01460 HAD-SF-IIA Haloacid 96.0 0.0094 2E-07 54.0 4.7 47 70-122 1-51 (236)
99 TIGR01454 AHBA_synth_RP 3-amin 96.0 0.013 2.9E-07 51.3 5.6 66 238-311 132-204 (205)
100 PRK13223 phosphoglycolate phos 96.0 0.01 2.3E-07 54.8 5.1 68 236-311 156-230 (272)
101 PRK08942 D,D-heptose 1,7-bisph 95.9 0.0072 1.6E-07 52.2 3.6 64 240-311 106-177 (181)
102 COG2179 Predicted hydrolase of 95.9 0.023 5.1E-07 48.3 6.4 58 66-127 27-85 (175)
103 TIGR01449 PGP_bact 2-phosphogl 95.8 0.013 2.8E-07 51.5 4.8 63 239-309 143-212 (213)
104 PF08235 LNS2: LNS2 (Lipin/Ned 95.8 0.01 2.2E-07 50.3 3.9 50 69-118 1-57 (157)
105 PF09419 PGP_phosphatase: Mito 95.8 0.017 3.7E-07 49.6 5.2 45 64-112 38-85 (168)
106 COG4087 Soluble P-type ATPase 95.8 0.015 3.3E-07 47.5 4.5 63 238-312 81-148 (152)
107 PRK13226 phosphoglycolate phos 95.8 0.019 4E-07 51.6 5.7 64 239-310 153-224 (229)
108 PLN03190 aminophospholipid tra 95.7 0.16 3.5E-06 56.3 13.3 69 230-316 853-924 (1178)
109 TIGR01544 HAD-SF-IE haloacid d 95.6 0.059 1.3E-06 50.0 8.4 57 66-122 21-90 (277)
110 PRK05446 imidazole glycerol-ph 95.6 0.015 3.2E-07 56.0 4.6 48 66-113 1-55 (354)
111 COG2217 ZntA Cation transport 95.5 0.018 3.9E-07 60.1 5.2 70 227-311 579-652 (713)
112 TIGR01685 MDP-1 magnesium-depe 95.5 0.027 5.8E-07 48.7 5.4 57 68-124 3-82 (174)
113 PF03031 NIF: NLI interacting 95.5 0.016 3.6E-07 48.7 4.0 56 68-123 1-70 (159)
114 TIGR01675 plant-AP plant acid 95.5 0.022 4.7E-07 51.4 4.9 54 64-117 74-149 (229)
115 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.4 0.025 5.4E-07 51.3 5.0 45 67-117 8-53 (242)
116 COG0546 Gph Predicted phosphat 95.4 0.03 6.5E-07 50.0 5.5 68 239-311 147-218 (220)
117 PF06888 Put_Phosphatase: Puta 95.3 0.022 4.7E-07 51.6 4.2 78 233-314 146-234 (234)
118 PF13242 Hydrolase_like: HAD-h 95.2 0.045 9.8E-07 40.1 5.1 58 241-305 8-74 (75)
119 PRK13582 thrH phosphoserine ph 95.1 0.032 6.9E-07 48.8 4.7 32 91-122 70-101 (205)
120 PRK09552 mtnX 2-hydroxy-3-keto 95.1 0.031 6.7E-07 49.8 4.6 68 237-316 147-218 (219)
121 PRK01122 potassium-transportin 95.0 0.031 6.7E-07 58.2 5.1 68 228-310 488-559 (679)
122 TIGR02726 phenyl_P_delta pheny 95.0 0.034 7.4E-07 47.8 4.5 57 67-123 7-69 (169)
123 PRK09552 mtnX 2-hydroxy-3-keto 94.9 0.026 5.5E-07 50.3 3.5 15 67-81 3-17 (219)
124 PTZ00445 p36-lilke protein; Pr 94.9 0.053 1.2E-06 48.1 5.4 66 49-115 24-102 (219)
125 TIGR01523 ATPase-IID_K-Na pota 94.9 0.035 7.5E-07 60.8 5.1 66 228-308 726-796 (1053)
126 TIGR01524 ATPase-IIIB_Mg magne 94.8 0.054 1.2E-06 58.2 6.4 60 227-301 582-643 (867)
127 TIGR00338 serB phosphoserine p 94.8 0.055 1.2E-06 47.8 5.4 33 90-122 86-119 (219)
128 PRK14010 potassium-transportin 94.8 0.033 7.2E-07 57.9 4.4 68 228-310 484-555 (673)
129 TIGR02250 FCP1_euk FCP1-like p 94.7 0.072 1.6E-06 45.2 5.7 60 64-123 3-92 (156)
130 PRK10826 2-deoxyglucose-6-phos 94.6 0.099 2.1E-06 46.4 6.6 62 238-307 149-216 (222)
131 TIGR02245 HAD_IIID1 HAD-superf 94.6 0.058 1.2E-06 47.5 4.8 59 64-122 18-78 (195)
132 PRK13478 phosphonoacetaldehyde 94.6 0.13 2.8E-06 47.2 7.4 68 239-314 160-258 (267)
133 PLN02954 phosphoserine phospha 94.5 0.065 1.4E-06 47.5 5.2 33 90-122 85-118 (224)
134 PRK08238 hypothetical protein; 94.5 0.091 2E-06 52.6 6.6 47 89-135 72-121 (479)
135 TIGR01686 FkbH FkbH-like domai 94.4 0.08 1.7E-06 50.1 5.8 57 67-123 3-66 (320)
136 TIGR01106 ATPase-IIC_X-K sodiu 94.4 0.056 1.2E-06 59.0 5.2 60 228-302 664-726 (997)
137 TIGR03333 salvage_mtnX 2-hydro 94.3 0.06 1.3E-06 47.7 4.6 66 237-314 143-212 (214)
138 TIGR01517 ATPase-IIB_Ca plasma 94.3 0.053 1.1E-06 58.8 4.9 61 227-302 648-711 (941)
139 TIGR01647 ATPase-IIIA_H plasma 94.2 0.085 1.8E-06 55.9 6.1 61 227-302 514-576 (755)
140 PRK15122 magnesium-transportin 94.2 0.09 1.9E-06 56.8 6.4 61 226-301 616-678 (903)
141 TIGR02251 HIF-SF_euk Dullard-l 94.2 0.094 2E-06 44.6 5.3 57 67-123 1-76 (162)
142 PRK10517 magnesium-transportin 94.2 0.087 1.9E-06 56.9 6.2 62 226-302 616-679 (902)
143 PRK08942 D,D-heptose 1,7-bisph 94.2 0.13 2.9E-06 44.2 6.3 48 67-114 3-55 (181)
144 PF03767 Acid_phosphat_B: HAD 94.1 0.025 5.4E-07 51.1 1.7 53 65-117 70-144 (229)
145 COG0560 SerB Phosphoserine pho 94.1 0.066 1.4E-06 47.8 4.3 35 88-122 76-111 (212)
146 PF12710 HAD: haloacid dehalog 94.0 0.069 1.5E-06 45.8 4.1 33 238-274 157-192 (192)
147 TIGR01489 DKMTPPase-SF 2,3-dik 93.9 0.12 2.6E-06 44.1 5.6 37 233-276 145-181 (188)
148 TIGR01456 CECR5 HAD-superfamil 93.6 0.13 2.9E-06 48.7 5.6 45 69-119 2-54 (321)
149 COG0647 NagD Predicted sugar p 93.6 0.093 2E-06 48.5 4.3 43 67-115 8-51 (269)
150 TIGR01494 ATPase_P-type ATPase 93.5 0.43 9.3E-06 48.0 9.5 50 238-302 394-443 (499)
151 PF12689 Acid_PPase: Acid Phos 93.5 0.69 1.5E-05 39.8 9.3 39 223-267 96-134 (169)
152 TIGR02137 HSK-PSP phosphoserin 93.4 0.1 2.2E-06 46.2 4.2 35 89-123 68-102 (203)
153 KOG0210 P-type ATPase [Inorgan 93.4 0.067 1.5E-06 54.8 3.3 62 238-309 768-831 (1051)
154 PF00702 Hydrolase: haloacid d 93.3 0.062 1.4E-06 46.8 2.7 32 242-276 183-214 (215)
155 COG4359 Uncharacterized conser 93.3 0.19 4.2E-06 43.5 5.4 35 233-275 143-177 (220)
156 TIGR01488 HAD-SF-IB Haloacid D 93.2 0.1 2.2E-06 44.3 3.8 33 90-122 74-107 (177)
157 TIGR01422 phosphonatase phosph 93.1 0.18 4E-06 45.7 5.6 64 239-310 158-252 (253)
158 TIGR01680 Veg_Stor_Prot vegeta 92.7 0.23 5E-06 45.9 5.6 52 66-117 100-174 (275)
159 TIGR02254 YjjG/YfnB HAD superf 92.7 0.26 5.6E-06 43.4 5.8 64 239-310 154-224 (224)
160 PLN02575 haloacid dehalogenase 92.5 0.34 7.4E-06 47.0 6.7 72 239-317 274-349 (381)
161 TIGR03351 PhnX-like phosphonat 92.4 0.2 4.3E-06 44.3 4.7 64 239-310 147-219 (220)
162 TIGR03333 salvage_mtnX 2-hydro 92.4 0.15 3.4E-06 45.1 4.0 34 89-122 70-104 (214)
163 PRK11587 putative phosphatase; 92.3 0.31 6.8E-06 43.1 5.8 60 239-306 140-203 (218)
164 COG0474 MgtA Cation transport 92.3 0.18 3.9E-06 54.6 5.0 61 227-302 618-681 (917)
165 TIGR01489 DKMTPPase-SF 2,3-dik 92.1 0.17 3.8E-06 43.1 3.8 15 67-81 1-15 (188)
166 PRK14988 GMP/IMP nucleotidase; 92.1 0.25 5.5E-06 44.2 5.0 68 239-314 151-222 (224)
167 PRK11590 hypothetical protein; 92.0 0.19 4.1E-06 44.5 4.1 43 236-289 161-203 (211)
168 COG0241 HisB Histidinol phosph 91.8 0.16 3.6E-06 44.1 3.2 46 67-112 5-55 (181)
169 PRK09449 dUMP phosphatase; Pro 91.4 0.64 1.4E-05 41.1 6.8 65 239-311 152-223 (224)
170 TIGR02253 CTE7 HAD superfamily 91.1 0.39 8.3E-06 42.3 5.1 60 239-306 152-220 (221)
171 TIGR01545 YfhB_g-proteo haloac 91.0 0.24 5.3E-06 44.0 3.7 43 236-289 160-202 (210)
172 TIGR00213 GmhB_yaeD D,D-heptos 90.5 0.48 1E-05 40.6 4.9 48 68-115 2-53 (176)
173 PLN02770 haloacid dehalogenase 90.3 0.44 9.5E-06 43.3 4.8 60 238-305 165-230 (248)
174 PRK10725 fructose-1-P/6-phosph 90.3 0.18 3.9E-06 43.3 2.1 36 238-276 143-178 (188)
175 PLN02779 haloacid dehalogenase 90.2 0.49 1.1E-05 44.1 5.1 60 239-306 204-268 (286)
176 KOG1615 Phosphoserine phosphat 89.9 0.04 8.6E-07 48.1 -2.3 60 236-301 157-216 (227)
177 KOG0202 Ca2+ transporting ATPa 89.3 0.78 1.7E-05 48.3 6.1 61 227-302 657-720 (972)
178 TIGR02252 DREG-2 REG-2-like, H 89.2 0.25 5.4E-06 43.0 2.2 34 240-276 163-197 (203)
179 TIGR01548 HAD-SF-IA-hyp1 haloa 89.2 0.2 4.4E-06 43.5 1.6 32 239-273 163-194 (197)
180 PLN03243 haloacid dehalogenase 89.1 0.84 1.8E-05 41.9 5.7 64 239-310 167-234 (260)
181 PRK11590 hypothetical protein; 88.9 0.23 4.9E-06 44.0 1.7 15 66-80 5-19 (211)
182 PRK13288 pyrophosphatase PpaX; 88.9 0.25 5.5E-06 43.4 2.0 49 241-291 110-165 (214)
183 PRK11587 putative phosphatase; 88.5 0.25 5.4E-06 43.8 1.7 14 67-80 3-16 (218)
184 TIGR02253 CTE7 HAD superfamily 88.5 0.59 1.3E-05 41.1 4.1 32 68-104 3-34 (221)
185 PRK06698 bifunctional 5'-methy 88.5 1.1 2.5E-05 44.5 6.5 65 239-313 387-456 (459)
186 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.4 1.4 3E-05 40.3 6.6 50 68-119 2-52 (257)
187 PRK10748 flavin mononucleotide 87.7 0.38 8.2E-06 43.4 2.4 63 239-309 165-237 (238)
188 PLN02645 phosphoglycolate phos 87.6 1.8 4E-05 40.7 7.1 47 68-120 29-76 (311)
189 PLN02770 haloacid dehalogenase 87.5 0.34 7.4E-06 44.0 2.0 14 67-80 22-35 (248)
190 COG2503 Predicted secreted aci 87.3 1.3 2.8E-05 40.2 5.4 45 37-81 48-93 (274)
191 TIGR01993 Pyr-5-nucltdase pyri 87.2 0.54 1.2E-05 40.3 3.0 35 239-276 143-177 (184)
192 KOG0207 Cation transport ATPas 87.1 1.2 2.5E-05 47.4 5.8 69 227-310 765-837 (951)
193 TIGR02009 PGMB-YQAB-SF beta-ph 86.9 0.34 7.3E-06 41.3 1.5 35 239-276 144-178 (185)
194 COG3700 AphA Acid phosphatase 86.8 2.7 5.8E-05 36.4 6.8 77 45-121 40-147 (237)
195 TIGR03351 PhnX-like phosphonat 86.1 0.48 1E-05 41.8 2.1 28 68-104 2-29 (220)
196 TIGR01422 phosphonatase phosph 84.5 0.91 2E-05 41.1 3.2 14 67-80 2-15 (253)
197 PHA02597 30.2 hypothetical pro 84.4 0.49 1.1E-05 41.0 1.4 60 239-306 132-194 (197)
198 TIGR02254 YjjG/YfnB HAD superf 84.4 0.61 1.3E-05 41.0 2.0 50 241-291 124-180 (224)
199 PRK10826 2-deoxyglucose-6-phos 84.4 0.57 1.2E-05 41.5 1.8 16 65-80 5-20 (222)
200 PRK13226 phosphoglycolate phos 84.0 0.48 1E-05 42.4 1.1 49 241-291 123-178 (229)
201 PLN02779 haloacid dehalogenase 83.9 0.64 1.4E-05 43.3 1.9 15 66-80 39-53 (286)
202 PRK10563 6-phosphogluconate ph 83.8 0.71 1.5E-05 40.8 2.1 41 238-286 143-183 (221)
203 TIGR01545 YfhB_g-proteo haloac 83.8 0.99 2.2E-05 40.0 3.1 16 66-81 4-19 (210)
204 TIGR01990 bPGM beta-phosphoglu 83.7 0.89 1.9E-05 38.7 2.6 36 238-276 142-177 (185)
205 TIGR01549 HAD-SF-IA-v1 haloaci 83.4 0.53 1.2E-05 38.9 1.1 34 238-275 119-152 (154)
206 TIGR01454 AHBA_synth_RP 3-amin 83.2 0.5 1.1E-05 41.2 0.9 48 242-291 104-158 (205)
207 TIGR01491 HAD-SF-IB-PSPlk HAD- 83.1 0.71 1.5E-05 39.8 1.8 14 67-80 4-17 (201)
208 TIGR01662 HAD-SF-IIIA HAD-supe 83.1 1.7 3.6E-05 35.0 3.9 36 238-276 86-123 (132)
209 KOG1615 Phosphoserine phosphat 83.0 2.5 5.3E-05 37.2 5.0 35 87-121 86-121 (227)
210 PLN02940 riboflavin kinase 82.9 1.9 4.2E-05 41.9 4.9 61 238-306 151-216 (382)
211 COG0546 Gph Predicted phosphat 82.7 0.77 1.7E-05 40.8 1.9 49 240-291 116-172 (220)
212 TIGR01261 hisB_Nterm histidino 82.6 0.94 2E-05 38.5 2.3 35 239-276 105-139 (161)
213 PRK14988 GMP/IMP nucleotidase; 82.6 0.6 1.3E-05 41.7 1.2 13 68-80 11-23 (224)
214 PRK13225 phosphoglycolate phos 82.5 0.58 1.3E-05 43.3 1.0 14 67-80 62-75 (273)
215 TIGR01493 HAD-SF-IA-v2 Haloaci 82.4 0.97 2.1E-05 38.2 2.3 30 240-272 142-171 (175)
216 PRK10444 UMP phosphatase; Prov 82.2 3.8 8.3E-05 37.3 6.3 61 238-306 175-245 (248)
217 PRK13223 phosphoglycolate phos 82.0 0.73 1.6E-05 42.6 1.5 28 68-104 14-41 (272)
218 TIGR01452 PGP_euk phosphoglyco 81.9 1.8 3.9E-05 40.0 4.1 43 240-290 205-249 (279)
219 KOG3120 Predicted haloacid deh 81.9 3.5 7.5E-05 37.0 5.6 82 229-318 155-251 (256)
220 PRK13478 phosphonoacetaldehyde 81.8 1.3 2.8E-05 40.5 3.1 15 67-81 4-18 (267)
221 COG4087 Soluble P-type ATPase 81.7 2.2 4.7E-05 35.1 3.9 48 70-123 17-64 (152)
222 PRK10563 6-phosphogluconate ph 81.5 0.97 2.1E-05 39.9 2.1 49 242-291 114-169 (221)
223 PF05152 DUF705: Protein of un 81.5 8.1 0.00017 36.0 8.0 78 41-121 97-175 (297)
224 TIGR01656 Histidinol-ppas hist 80.1 1.4 3.1E-05 36.5 2.5 36 238-276 102-137 (147)
225 PLN03243 haloacid dehalogenase 80.1 1.9 4E-05 39.6 3.5 49 241-291 137-192 (260)
226 PRK13222 phosphoglycolate phos 79.8 0.95 2.1E-05 39.8 1.4 14 67-80 6-19 (226)
227 PLN02811 hydrolase 79.6 2.7 5.9E-05 37.1 4.4 59 239-305 139-205 (220)
228 COG3882 FkbH Predicted enzyme 79.4 5.4 0.00012 39.8 6.5 71 57-127 211-295 (574)
229 COG1011 Predicted hydrolase (H 79.3 5.6 0.00012 34.9 6.3 64 241-312 158-228 (229)
230 PRK09456 ?-D-glucose-1-phospha 78.8 2.6 5.7E-05 36.6 3.9 35 239-276 143-177 (199)
231 TIGR01990 bPGM beta-phosphoglu 78.5 1.7 3.7E-05 36.9 2.6 27 69-104 1-27 (185)
232 TIGR01681 HAD-SF-IIIC HAD-supe 78.5 2.9 6.3E-05 33.9 3.8 35 238-275 90-126 (128)
233 TIGR02009 PGMB-YQAB-SF beta-ph 77.8 2.1 4.5E-05 36.4 2.9 28 68-104 2-29 (185)
234 PRK09449 dUMP phosphatase; Pro 77.7 1.2 2.6E-05 39.3 1.5 49 241-291 122-178 (224)
235 PRK10748 flavin mononucleotide 77.0 5.7 0.00012 35.7 5.7 15 66-80 9-23 (238)
236 TIGR01686 FkbH FkbH-like domai 76.8 5.7 0.00012 37.5 5.9 36 238-276 87-122 (320)
237 KOG3109 Haloacid dehalogenase- 76.4 2.7 5.9E-05 37.6 3.2 56 240-302 163-219 (244)
238 TIGR01428 HAD_type_II 2-haloal 76.4 1.4 3E-05 38.1 1.5 35 239-276 150-184 (198)
239 PRK06698 bifunctional 5'-methy 76.0 1.4 3E-05 43.9 1.5 29 68-101 242-270 (459)
240 COG0637 Predicted phosphatase/ 75.9 1.6 3.5E-05 39.0 1.8 33 241-276 146-178 (221)
241 KOG1618 Predicted phosphatase 75.8 4.1 8.8E-05 38.5 4.3 42 64-111 32-78 (389)
242 TIGR01668 YqeG_hyp_ppase HAD s 75.0 8.5 0.00018 32.7 5.9 45 238-290 92-138 (170)
243 PF11019 DUF2608: Protein of u 74.5 12 0.00027 34.2 7.2 33 236-271 160-192 (252)
244 TIGR02247 HAD-1A3-hyp Epoxide 74.0 1.8 4E-05 37.8 1.6 34 240-276 155-188 (211)
245 PF13419 HAD_2: Haloacid dehal 73.4 2.7 5.9E-05 34.6 2.5 36 238-276 134-169 (176)
246 PRK08238 hypothetical protein; 73.3 2.9 6.4E-05 41.9 3.0 41 238-291 128-168 (479)
247 TIGR01428 HAD_type_II 2-haloal 72.6 4 8.6E-05 35.2 3.4 36 241-278 120-159 (198)
248 KOG0206 P-type ATPase [General 71.7 2.7 5.8E-05 46.3 2.4 33 238-276 781-813 (1151)
249 TIGR01548 HAD-SF-IA-hyp1 haloa 71.5 3.1 6.7E-05 36.0 2.4 36 240-277 133-171 (197)
250 PLN02940 riboflavin kinase 71.4 2.2 4.8E-05 41.5 1.6 14 67-80 11-24 (382)
251 TIGR02247 HAD-1A3-hyp Epoxide 70.8 8 0.00017 33.6 5.0 48 267-314 152-209 (211)
252 TIGR01509 HAD-SF-IA-v3 haloaci 70.7 6.7 0.00014 32.9 4.3 34 240-276 143-176 (183)
253 TIGR01509 HAD-SF-IA-v3 haloaci 70.6 1.9 4.2E-05 36.3 0.9 11 70-80 2-12 (183)
254 PRK10725 fructose-1-P/6-phosph 70.5 4.5 9.8E-05 34.4 3.2 15 66-80 4-18 (188)
255 TIGR01549 HAD-SF-IA-v1 haloaci 70.0 4.7 0.0001 33.1 3.1 27 69-104 1-27 (154)
256 PHA02597 30.2 hypothetical pro 69.9 6.7 0.00015 33.8 4.2 14 68-81 3-16 (197)
257 COG1011 Predicted hydrolase (H 69.7 2.9 6.2E-05 36.8 1.9 48 243-291 128-181 (229)
258 PF00702 Hydrolase: haloacid d 68.7 3.2 7E-05 35.8 1.9 49 238-290 152-204 (215)
259 cd00218 GlcAT-I Beta1,3-glucur 68.6 10 0.00023 34.0 5.1 46 231-279 72-119 (223)
260 TIGR02252 DREG-2 REG-2-like, H 65.6 6.9 0.00015 33.8 3.4 14 68-81 1-14 (203)
261 TIGR01993 Pyr-5-nucltdase pyri 65.2 7.8 0.00017 33.0 3.6 37 241-278 109-152 (184)
262 PLN02177 glycerol-3-phosphate 64.7 7.5 0.00016 39.2 3.9 40 238-289 176-215 (497)
263 PRK09456 ?-D-glucose-1-phospha 64.1 3.9 8.5E-05 35.5 1.6 48 267-314 141-198 (199)
264 PF03360 Glyco_transf_43: Glyc 63.4 11 0.00023 33.5 4.2 43 233-279 56-101 (207)
265 KOG3085 Predicted hydrolase (H 62.8 8.3 0.00018 35.0 3.4 43 242-291 173-216 (237)
266 TIGR01456 CECR5 HAD-superfamil 62.4 25 0.00054 33.2 6.8 48 259-310 265-320 (321)
267 TIGR01493 HAD-SF-IA-v2 Haloaci 62.0 6.9 0.00015 32.9 2.7 13 69-81 1-13 (175)
268 PRK05446 imidazole glycerol-ph 61.4 16 0.00036 35.1 5.4 36 238-276 105-140 (354)
269 PF06941 NT5C: 5' nucleotidase 61.0 4.9 0.00011 34.8 1.6 13 68-80 2-15 (191)
270 smart00577 CPDc catalytic doma 60.8 4.5 9.7E-05 33.6 1.2 30 243-275 104-133 (148)
271 TIGR01691 enolase-ppase 2,3-di 60.6 8.3 0.00018 34.5 3.0 36 238-276 153-188 (220)
272 KOG0203 Na+/K+ ATPase, alpha s 60.5 6.2 0.00013 41.9 2.4 37 259-300 707-746 (1019)
273 KOG2116 Protein involved in pl 60.4 14 0.0003 38.2 4.7 79 64-142 527-616 (738)
274 TIGR02399 salt_tol_Pase glucos 59.9 17 0.00036 34.7 4.9 46 64-111 5-50 (389)
275 COG4483 Uncharacterized protei 59.4 5.8 0.00013 28.3 1.4 28 241-275 5-32 (68)
276 KOG3120 Predicted haloacid deh 59.3 26 0.00056 31.6 5.7 18 64-81 10-27 (256)
277 TIGR01511 ATPase-IB1_Cu copper 59.0 17 0.00037 37.3 5.3 57 66-124 384-441 (562)
278 PF06888 Put_Phosphatase: Puta 58.5 5.3 0.00012 36.2 1.4 14 68-81 1-14 (234)
279 TIGR01685 MDP-1 magnesium-depe 58.3 19 0.0004 31.1 4.7 23 251-276 127-149 (174)
280 cd04256 AAK_P5CS_ProBA AAK_P5C 57.3 32 0.0007 32.0 6.5 24 63-86 191-214 (284)
281 PHA02530 pseT polynucleotide k 57.1 12 0.00026 34.6 3.5 36 238-276 252-288 (300)
282 COG4359 Uncharacterized conser 56.2 9.3 0.0002 33.4 2.4 15 66-80 2-16 (220)
283 COG2179 Predicted hydrolase of 53.8 11 0.00023 32.4 2.4 43 240-289 96-139 (175)
284 PLN02919 haloacid dehalogenase 53.5 6.8 0.00015 43.3 1.4 60 239-306 220-285 (1057)
285 PLN02919 haloacid dehalogenase 53.2 20 0.00042 39.8 4.9 15 66-80 74-88 (1057)
286 KOG2882 p-Nitrophenyl phosphat 51.0 36 0.00079 31.9 5.5 46 70-121 25-71 (306)
287 PF09506 Salt_tol_Pase: Glucos 50.1 29 0.00062 33.1 4.8 44 66-111 1-44 (381)
288 PF04312 DUF460: Protein of un 49.7 19 0.00041 29.8 3.2 60 70-142 46-108 (138)
289 KOG0204 Calcium transporting A 47.8 26 0.00056 37.5 4.5 53 237-301 725-780 (1034)
290 TIGR01664 DNA-3'-Pase DNA 3'-p 47.7 18 0.00039 30.7 2.9 34 240-276 111-154 (166)
291 TIGR00071 hisT_truA pseudourid 47.6 23 0.00049 31.9 3.7 56 67-122 2-58 (227)
292 PF11019 DUF2608: Protein of u 46.8 26 0.00056 32.0 4.0 29 54-82 5-35 (252)
293 COG4996 Predicted phosphatase 46.3 42 0.00092 27.7 4.6 54 69-122 2-75 (164)
294 TIGR01460 HAD-SF-IIA Haloacid 45.7 28 0.00061 31.2 4.0 35 239-276 190-226 (236)
295 KOG1476 Beta-1,3-glucuronyltra 44.3 45 0.00097 31.5 5.1 44 239-285 164-210 (330)
296 PLN02177 glycerol-3-phosphate 44.3 15 0.00033 37.1 2.2 15 67-81 22-36 (497)
297 PF06014 DUF910: Bacterial pro 44.2 7.6 0.00017 27.5 0.0 27 242-275 6-32 (62)
298 COG2216 KdpB High-affinity K+ 44.1 9.4 0.0002 38.5 0.7 65 229-308 491-559 (681)
299 TIGR00735 hisF imidazoleglycer 43.9 76 0.0017 28.8 6.6 62 55-116 112-180 (254)
300 PTZ00489 glutamate 5-kinase; P 43.6 89 0.0019 28.8 7.0 18 64-81 161-178 (264)
301 COG0241 HisB Histidinol phosph 43.5 72 0.0016 27.7 6.0 78 203-291 69-152 (181)
302 KOG2134 Polynucleotide kinase 43.1 22 0.00047 34.6 2.9 48 64-111 72-127 (422)
303 cd04239 AAK_UMPK-like AAK_UMPK 40.6 62 0.0013 28.8 5.4 61 62-122 144-219 (229)
304 KOG0209 P-type ATPase [Inorgan 40.2 22 0.00048 38.0 2.6 28 259-291 808-835 (1160)
305 KOG0208 Cation transport ATPas 39.3 26 0.00057 38.0 3.1 71 225-310 830-902 (1140)
306 PLN02458 transferase, transfer 39.0 50 0.0011 31.4 4.6 35 239-279 190-226 (346)
307 PF13419 HAD_2: Haloacid dehal 38.2 29 0.00063 28.3 2.7 34 89-122 77-111 (176)
308 COG5083 SMP2 Uncharacterized p 37.7 18 0.0004 35.7 1.5 17 64-80 372-388 (580)
309 TIGR01092 P5CS delta l-pyrroli 37.6 81 0.0018 33.4 6.4 59 63-122 180-264 (715)
310 PRK11009 aphA acid phosphatase 37.1 29 0.00063 31.4 2.7 17 260-276 187-203 (237)
311 PRK12314 gamma-glutamyl kinase 36.8 1.1E+02 0.0025 28.0 6.6 19 63-81 167-185 (266)
312 PF12710 HAD: haloacid dehalog 36.7 27 0.00058 29.5 2.3 41 92-132 92-136 (192)
313 PF09949 DUF2183: Uncharacteri 36.5 1.3E+02 0.0028 23.4 5.9 36 238-278 50-86 (100)
314 KOG4549 Magnesium-dependent ph 36.4 89 0.0019 25.7 5.0 53 68-120 19-76 (144)
315 COG1570 XseA Exonuclease VII, 36.0 4.3E+02 0.0092 26.4 10.6 113 180-299 120-244 (440)
316 smart00775 LNS2 LNS2 domain. T 35.9 62 0.0013 27.1 4.4 37 238-276 102-138 (157)
317 TIGR01449 PGP_bact 2-phosphogl 35.5 47 0.001 28.6 3.7 35 89-123 85-120 (213)
318 KOG1359 Glycine C-acetyltransf 35.4 1E+02 0.0022 29.2 5.8 70 58-141 185-277 (417)
319 PLN02499 glycerol-3-phosphate 34.9 33 0.00071 34.6 2.8 23 68-95 9-31 (498)
320 PF06189 5-nucleotidase: 5'-nu 34.2 1E+02 0.0022 28.4 5.7 58 65-122 119-204 (264)
321 PLN02418 delta-1-pyrroline-5-c 34.2 1E+02 0.0022 32.7 6.5 58 64-122 189-272 (718)
322 PRK14558 pyrH uridylate kinase 34.0 95 0.0021 27.7 5.5 60 63-122 145-219 (231)
323 PRK10886 DnaA initiator-associ 33.9 1.8E+02 0.0038 25.5 7.0 54 58-124 102-156 (196)
324 cd04242 AAK_G5K_ProB AAK_G5K_P 33.3 65 0.0014 29.2 4.4 20 62-81 154-173 (251)
325 PRK14058 acetylglutamate/acety 33.2 1.2E+02 0.0026 27.8 6.1 21 61-81 179-199 (268)
326 KOG0205 Plasma membrane H+-tra 33.2 27 0.00058 36.4 1.9 63 226-303 563-627 (942)
327 cd04731 HisF The cyclase subun 32.8 1.5E+02 0.0033 26.5 6.7 59 54-115 108-173 (243)
328 CHL00202 argB acetylglutamate 32.6 1.2E+02 0.0025 28.2 6.0 19 62-80 192-210 (284)
329 PRK14557 pyrH uridylate kinase 31.4 1.6E+02 0.0034 26.8 6.5 60 64-123 153-228 (247)
330 TIGR01459 HAD-SF-IIA-hyp4 HAD- 31.2 62 0.0013 28.9 3.8 36 239-276 197-233 (242)
331 PF13382 Adenine_deam_C: Adeni 31.1 1.7E+02 0.0036 25.2 6.3 56 259-319 67-133 (171)
332 COG0548 ArgB Acetylglutamate k 30.9 1.5E+02 0.0032 27.4 6.2 62 58-119 170-250 (265)
333 TIGR01490 HAD-SF-IB-hyp1 HAD-s 30.9 66 0.0014 27.5 3.9 34 89-122 87-121 (202)
334 PRK04128 1-(5-phosphoribosyl)- 30.8 91 0.002 28.0 4.8 47 67-123 44-93 (228)
335 TIGR01672 AphA HAD superfamily 30.7 45 0.00097 30.2 2.8 17 260-276 187-203 (237)
336 PRK00358 pyrH uridylate kinase 30.7 1.2E+02 0.0027 26.8 5.7 62 62-123 146-222 (231)
337 KOG1605 TFIIF-interacting CTD 30.2 29 0.00064 32.0 1.5 17 64-80 86-102 (262)
338 cd04251 AAK_NAGK-UC AAK_NAGK-U 30.1 1.3E+02 0.0029 27.3 5.9 18 62-79 176-193 (257)
339 TIGR01106 ATPase-IIC_X-K sodiu 29.9 62 0.0014 35.7 4.2 34 89-122 568-602 (997)
340 cd00006 PTS_IIA_man PTS_IIA, P 29.7 1.5E+02 0.0032 23.5 5.5 49 58-122 49-100 (122)
341 PRK00286 xseA exodeoxyribonucl 29.6 3.4E+02 0.0074 26.7 9.1 41 268-310 212-258 (438)
342 PRK14556 pyrH uridylate kinase 28.1 1.3E+02 0.0027 27.6 5.2 60 64-123 164-238 (249)
343 COG0647 NagD Predicted sugar p 27.9 97 0.0021 28.7 4.5 41 242-290 195-237 (269)
344 cd04255 AAK_UMPK-MosAB AAK_UMP 27.9 1.7E+02 0.0037 26.9 6.1 19 62-80 173-191 (262)
345 KOG3040 Predicted sugar phosph 27.1 38 0.00083 30.3 1.6 47 68-120 8-58 (262)
346 COG5663 Uncharacterized conser 27.1 28 0.00061 29.9 0.8 11 70-80 9-19 (194)
347 COG0101 TruA Pseudouridylate s 27.1 85 0.0018 29.0 4.0 55 67-121 3-58 (266)
348 COG1608 Predicted archaeal kin 26.6 2.7E+02 0.0058 25.5 6.9 21 62-82 159-179 (252)
349 TIGR02075 pyrH_bact uridylate 26.1 1.4E+02 0.0031 26.6 5.2 62 62-123 147-224 (233)
350 cd04241 AAK_FomA-like AAK_FomA 26.0 1.9E+02 0.0041 26.0 6.1 18 63-80 160-177 (252)
351 cd02966 TlpA_like_family TlpA- 26.0 1.8E+02 0.0038 21.3 5.2 34 44-77 29-63 (116)
352 PF11071 DUF2872: Protein of u 25.6 25 0.00054 28.9 0.2 70 238-314 56-140 (141)
353 PF01380 SIS: SIS domain SIS d 25.0 1.3E+02 0.0029 23.4 4.4 48 62-122 50-98 (131)
354 KOG3040 Predicted sugar phosph 25.0 88 0.0019 28.1 3.4 45 238-290 183-228 (262)
355 cd04253 AAK_UMPK-PyrH-Pf AAK_U 24.8 2.6E+02 0.0056 24.6 6.7 60 63-122 128-211 (221)
356 COG1576 Uncharacterized conser 24.2 2.4E+02 0.0053 23.8 5.8 48 58-115 59-107 (155)
357 TIGR01027 proB glutamate 5-kin 23.9 2.5E+02 0.0055 27.1 6.8 59 63-122 156-242 (363)
358 PF06342 DUF1057: Alpha/beta h 23.8 1.4E+02 0.0031 28.0 4.8 68 216-291 69-136 (297)
359 PRK14586 tRNA pseudouridine sy 23.8 85 0.0018 28.5 3.4 55 67-121 3-58 (245)
360 COG2217 ZntA Cation transport 23.7 2E+02 0.0044 30.6 6.5 55 66-122 516-571 (713)
361 cd04254 AAK_UMPK-PyrH-Ec UMP k 23.6 1.7E+02 0.0036 26.1 5.2 62 62-123 146-222 (231)
362 TIGR02076 pyrH_arch uridylate 23.3 2.7E+02 0.0059 24.4 6.5 61 62-122 127-211 (221)
363 KOG4779 Predicted membrane pro 23.3 51 0.0011 24.0 1.4 24 244-270 25-48 (82)
364 PRK14024 phosphoribosyl isomer 23.3 2.6E+02 0.0056 25.1 6.4 75 56-135 114-199 (241)
365 cd04249 AAK_NAGK-NC AAK_NAGK-N 23.0 2.7E+02 0.0058 25.1 6.5 18 62-80 167-184 (252)
366 PF04007 DUF354: Protein of un 22.6 1E+02 0.0022 29.6 3.7 44 93-136 15-60 (335)
367 PF09419 PGP_phosphatase: Mito 22.5 2.4E+02 0.0052 24.1 5.7 28 259-290 138-166 (168)
368 TIGR01544 HAD-SF-IE haloacid d 22.2 1.8E+02 0.004 27.0 5.2 36 88-123 120-156 (277)
369 cd04237 AAK_NAGS-ABP AAK_NAGS- 22.0 1.9E+02 0.004 26.8 5.3 54 62-122 192-245 (280)
370 PRK12686 carbamate kinase; Rev 22.0 1.4E+02 0.0031 28.2 4.6 58 62-122 222-279 (312)
371 PF13701 DDE_Tnp_1_4: Transpos 21.9 60 0.0013 32.4 2.1 24 57-80 129-152 (448)
372 PRK05429 gamma-glutamyl kinase 21.8 2.4E+02 0.0052 27.3 6.2 20 62-81 163-182 (372)
373 COG1210 GalU UDP-glucose pyrop 21.4 1.2E+02 0.0026 28.3 3.8 27 96-122 40-68 (291)
374 PRK13936 phosphoheptose isomer 21.1 4.3E+02 0.0093 22.8 7.2 49 60-121 106-155 (197)
375 PF14581 SseB_C: SseB protein 20.9 2.1E+02 0.0045 22.0 4.7 76 37-120 19-96 (108)
376 PRK11133 serB phosphoserine ph 20.3 1.4E+02 0.0031 28.2 4.3 33 89-121 181-214 (322)
377 PF07302 AroM: AroM protein; 20.2 1.1E+02 0.0024 27.4 3.3 61 49-113 31-98 (221)
No 1
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=4.1e-69 Score=507.76 Aligned_cols=310 Identities=68% Similarity=1.174 Sum_probs=280.7
Q ss_pred CCCCCcchhHHHHHhcCCCCCCCCCc--cchHHHHHhhhhCCCCcchHHHHHHhhcCCCEEEEEecCCcccCCCCCCCcc
Q 020285 11 AGARPNNCWVESIRASSPTHMKSITP--SLLEEKRAWIIRHPSALDMFHEITEASKGKQIVMFLDYDGTLSPIVENPDRA 88 (328)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~w~~~~~~al~~~~~~~~~~~~k~~li~~D~DGTL~~~~~~p~~~ 88 (328)
.|.+++++|+|+||+|||||+|+.++ +.+..|++|+.+|||||+.|++|+..+++++++||+||||||+|++++|+.+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~psal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a 132 (366)
T PLN03017 53 GGGQRINAWVDSMRASSPTHLKSLPSSISSQQQLNSWIMQHPSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKA 132 (366)
T ss_pred ccccccchHHHHHhccCCCccccccccccchhhhhHHHhhCChHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccc
Confidence 45788999999999999999886654 3467899999999999999999999999999999999999999999989888
Q ss_pred cCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhCcccceEecCCCceeeCCCCCc-cccccCceeccCCCcccchHHHH
Q 020285 89 FMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKGL-KYNQKSKVVNFQPASEFLPLIDK 167 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~i~~~~~~~-~~~~~~e~~~~~~~~~~~~~i~e 167 (328)
.|+++++++|++|++.++|+|+|||++..+.+++++.+++|+|+||++++.|.+.. .+.+..+++.++++.+|++++++
T Consensus 133 ~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 212 (366)
T PLN03017 133 FMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDE 212 (366)
T ss_pred cCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHH
Confidence 99999999999999668999999999999999988888999999999999876531 12233345567777789999999
Q ss_pred HHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHH
Q 020285 168 VYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLL 247 (328)
Q Consensus 168 v~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll 247 (328)
+.+.|.++++.+||+++|+|++|++||||++++..|.++...+..+++.+|+++++.|++++||+|.++||||.|+++|+
T Consensus 213 v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL 292 (366)
T PLN03017 213 VYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLL 292 (366)
T ss_pred HHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999888888888899999999999999999999999966999999999999
Q ss_pred HHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCChhHHHHHHHHHHHhhhcC
Q 020285 248 ECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLREPDEVMDFLQKLVRWKRDS 320 (328)
Q Consensus 248 ~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~~~~~V~~~L~~l~~~~~~~ 320 (328)
+.+|+...++++++|||||.|||+||+++++.++|+||.||..+++|.|+|++++|++|.+||++|+.|++.+
T Consensus 293 ~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~~ 365 (366)
T PLN03017 293 ESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQMQ 365 (366)
T ss_pred HhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhhc
Confidence 9999887666799999999999999999987767999999988888999999999999999999999999864
No 2
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=3.3e-68 Score=500.27 Aligned_cols=311 Identities=67% Similarity=1.142 Sum_probs=278.6
Q ss_pred cccccccCCCCCcchhHHHHHhcCCCCCCCCCccchHHHHHhhhhCCCCcchHHHHHHhhcCCCEEEEEecCCcccCCCC
Q 020285 4 NLETNAAAGARPNNCWVESIRASSPTHMKSITPSLLEEKRAWIIRHPSALDMFHEITEASKGKQIVMFLDYDGTLSPIVE 83 (328)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~al~~~~~~~~~~~~k~~li~~D~DGTL~~~~~ 83 (328)
++.+++ |++++++|+|+||+|||||.++. ..|++|+.+|||||+.|+++++.+++++++||+||||||+|+++
T Consensus 42 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~w~~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~ 114 (354)
T PLN02151 42 DFQINN--GGGLIRSWVDSMRACSPTRPKSF-----NKQSCWIKEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVD 114 (354)
T ss_pred hhhhhc--cccccchHHHHHhccCCCcccch-----hhHHHHHHhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCC
Confidence 444533 46789999999999999998744 57999999999999999999999999999999999999999999
Q ss_pred CCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhCcccceEecCCCceeeCCCCCccccccCceeccCCCcccch
Q 020285 84 NPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKGLKYNQKSKVVNFQPASEFLP 163 (328)
Q Consensus 84 ~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~i~~~~~~~~~~~~~e~~~~~~~~~~~~ 163 (328)
+|+.+.++++++++|++|++.++|+|+|||++..+.+++++++++|+|+||++++.+.+...|.+..++..++++.+|.+
T Consensus 115 ~P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~ 194 (354)
T PLN02151 115 DPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLP 194 (354)
T ss_pred CcccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccchhhHH
Confidence 99999999999999999998789999999999999999999999999999999998754322333333445677778888
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHH
Q 020285 164 LIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKAL 243 (328)
Q Consensus 164 ~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al 243 (328)
+++++.+.+.+++..+||+++|+|++|++||||+++++.+..+.+.+.++++.+|+++++.|++++||+|.++||||.|+
T Consensus 195 ~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av 274 (354)
T PLN02151 195 VINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKAL 274 (354)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHH
Confidence 89999999988889999999999999999999999987777777888888888988999999999999995599999999
Q ss_pred HHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCChhHHHHHHHHHHHhhhcCC
Q 020285 244 EFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLREPDEVMDFLQKLVRWKRDSA 321 (328)
Q Consensus 244 ~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~~~~~V~~~L~~l~~~~~~~~ 321 (328)
++|++.+++....+++++|+|||.|||+||++++..++|+||.|+..+++|.|+|++++|++|.+||++|+.|++.+.
T Consensus 275 ~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~~~ 352 (354)
T PLN02151 275 EFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQLRC 352 (354)
T ss_pred HHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhhccc
Confidence 999999998765567899999999999999999876679999999888899999999999999999999999998754
No 3
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=4.8e-68 Score=504.60 Aligned_cols=310 Identities=56% Similarity=0.994 Sum_probs=277.3
Q ss_pred CCCCCcchhHHHHHhcCCCCCCCCCc--------cchHHHHHhhhhCCCCcchHHHHHHhhcCCCEEEEEecCCcccCCC
Q 020285 11 AGARPNNCWVESIRASSPTHMKSITP--------SLLEEKRAWIIRHPSALDMFHEITEASKGKQIVMFLDYDGTLSPIV 82 (328)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~w~~~~~~al~~~~~~~~~~~~k~~li~~D~DGTL~~~~ 82 (328)
...+++++|+|+||+|||||+|..++ +.+.+|++||.+|||||.+|++|..+.++++++|||||||||+|++
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv 134 (384)
T PLN02580 55 LDDVRSNGWLDAMKSSSPPRKKLNKDFNVELASPDTDFAYRTWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIV 134 (384)
T ss_pred cccccccchhhhhhccCCCccccccccccccccccchHHHHHHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCC
Confidence 34578999999999999999875332 3468999999999999999999999999999999999999999999
Q ss_pred CCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhCcccceEecCCCceeeCCCCCcc---c--------cccCc
Q 020285 83 ENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKGLK---Y--------NQKSK 151 (328)
Q Consensus 83 ~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~i~~~~~~~~---~--------~~~~e 151 (328)
++|+.+.++++++++|++|+++++|+|+|||++..+.+++++++++|+|+||++++.+.+... | .++.+
T Consensus 135 ~~Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~ 214 (384)
T PLN02580 135 DDPDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKE 214 (384)
T ss_pred CCcccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999988643210 0 11234
Q ss_pred eeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCCCeEEEecCeEEEE
Q 020285 152 VVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEI 231 (328)
Q Consensus 152 ~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI 231 (328)
|..++++.+|+++++++.+.+.++++.+||+++|+|++|++||||++++..+..+.+.++++++++|++.+..|++++||
T Consensus 215 ~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEV 294 (384)
T PLN02580 215 VNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEV 294 (384)
T ss_pred ccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEE
Confidence 55677878899999999999999999999999999999999999999887788888888888888888999999999999
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCChhHHHHHHH
Q 020285 232 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLREPDEVMDFLQ 311 (328)
Q Consensus 232 ~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~~~~~V~~~L~ 311 (328)
+|.+++|||.||++|++.+|+...+...++||||+.|||+||++++..+.|+||+|+|+++++.|+|++++|++|.+||+
T Consensus 295 rP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~ 374 (384)
T PLN02580 295 RPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLK 374 (384)
T ss_pred ecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHH
Confidence 99339999999999999999886543457999999999999999987656999999999999999999999999999999
Q ss_pred HHHHhhhcC
Q 020285 312 KLVRWKRDS 320 (328)
Q Consensus 312 ~l~~~~~~~ 320 (328)
+|+.|++.+
T Consensus 375 ~L~~~~~~~ 383 (384)
T PLN02580 375 SLVTWKKSE 383 (384)
T ss_pred HHHHhhhcC
Confidence 999999864
No 4
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=2.6e-39 Score=298.15 Aligned_cols=232 Identities=25% Similarity=0.422 Sum_probs=192.0
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhCcccceEecCCCceeeCCCCCc
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKGL 144 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~i~~~~~~~ 144 (328)
+.+||+||||||+++..+|+...++++++++|++|+++ +.|+|+|||+...+.++++...++++|+||++++.+++..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 68999999999999998899999999999999999984 5899999999999999987666789999999998765431
Q ss_pred cccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHH-HHHHhhCCCeEEE
Q 020285 145 KYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKV-KEVVNEYPQLNWR 223 (328)
Q Consensus 145 ~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v-~~~l~~~~~l~~~ 223 (328)
+ . .... .+.+.++.+.+.++.++.||.++|.++.++.+|||++++. ......+ ..+.+.++.+.+.
T Consensus 94 -~------~-~~l~---~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i~~~~~~~~~~ 160 (266)
T PRK10187 94 -H------I-VHLP---DAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRITQIWPQLALQ 160 (266)
T ss_pred -e------e-ccCC---hhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHHHhhCCceEEe
Confidence 1 1 0111 1345667777777777889999999999999999988532 1222333 3444456557788
Q ss_pred ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCCh
Q 020285 224 QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLREP 303 (328)
Q Consensus 224 ~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~~~ 303 (328)
+|+.++||+|+ ++|||.||++|++.+|++.+ .++||||+.||++||+++++.+ |++|+|||+. +.|.|.+++|
T Consensus 161 ~g~~~lEi~p~-g~~Kg~al~~ll~~~~~~~~---~v~~~GD~~nD~~mf~~~~~~~-g~~vavg~a~--~~A~~~l~~~ 233 (266)
T PRK10187 161 PGKCVVEIKPR-GTNKGEAIAAFMQEAPFAGR---TPVFVGDDLTDEAGFAVVNRLG-GISVKVGTGA--TQASWRLAGV 233 (266)
T ss_pred CCCEEEEeeCC-CCCHHHHHHHHHHhcCCCCC---eEEEEcCCccHHHHHHHHHhcC-CeEEEECCCC--CcCeEeCCCH
Confidence 89999999999 99999999999999998876 7999999999999999996543 8999999874 7899999999
Q ss_pred hHHHHHHHHHHHhhh
Q 020285 304 DEVMDFLQKLVRWKR 318 (328)
Q Consensus 304 ~~V~~~L~~l~~~~~ 318 (328)
++|..||..|+...+
T Consensus 234 ~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 234 PDVWSWLEMITTAQQ 248 (266)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999997665
No 5
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=5.4e-41 Score=304.12 Aligned_cols=225 Identities=40% Similarity=0.631 Sum_probs=151.9
Q ss_pred EEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC--CEEEEcCCChhhHHhhhCcccceEecCCCceeeCCCCCccccc
Q 020285 71 FLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKGLKYNQ 148 (328)
Q Consensus 71 ~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~i~~~~~~~~~~~ 148 (328)
||||||||+|+..+|+.+.++++++++|++|+++. .|+|+|||+...+..+.++++++++|+||+++..+++..+
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~--- 77 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEW--- 77 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EE---
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccc---
Confidence 79999999999999999999999999999999985 5999999999998888899999999999999999876421
Q ss_pred cCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChh----hHHHHHHHHHHHHhhCCCeEEEe
Q 020285 149 KSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEK----KWNDLAQKVKEVVNEYPQLNWRQ 224 (328)
Q Consensus 149 ~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~----~~~~~~~~v~~~l~~~~~l~~~~ 224 (328)
. ........++.+++.+.++++.+++||+++|.|++++.||||++++. ...++.+.+.+.+..++++++..
T Consensus 78 ----~-~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~ 152 (235)
T PF02358_consen 78 ----T-NLPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVP 152 (235)
T ss_dssp ----E--TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE
T ss_pred ----c-ccccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEE
Confidence 1 11223335677889999988889999999999999999999999877 45677777888888778999999
Q ss_pred cCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhC-CCceEEEEcCCC---CCccceEEe
Q 020285 225 GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKR-EQGFGILVSKFP---KKTSASYSL 300 (328)
Q Consensus 225 g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~-~~g~~v~v~n~~---~~t~A~~~l 300 (328)
|++++||+|. +.+||.|+++|++.++....+.++++|+|||.+||+||+++++. ..|++|.|+... ++|.|+|.+
T Consensus 153 g~~~vEvrp~-~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 153 GKKVVEVRPP-GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp -SSEEEEE-T-T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES---------------
T ss_pred CCCEEEEEeC-CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccc
Confidence 9999999999 99999999999999988644445999999999999999999874 238999999875 579999999
Q ss_pred CChh
Q 020285 301 REPD 304 (328)
Q Consensus 301 ~~~~ 304 (328)
+||+
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9884
No 6
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=2e-38 Score=288.86 Aligned_cols=236 Identities=30% Similarity=0.422 Sum_probs=183.8
Q ss_pred CCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC--CEEEEcCCChhhHHhhhCcccceEecCCCceeeCCCC
Q 020285 65 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTK 142 (328)
Q Consensus 65 ~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~i~~~~~ 142 (328)
+|+++|||||||||+++..+|+.+.++++++++|++|+++. .|+|+|||+...+..++.+++++++|+||++++.++.
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~g~ 80 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGS 80 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecCCC
Confidence 57899999999999999988999999999999999999984 5789999999988888778889999999999987332
Q ss_pred CccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCCh-hhHHH-HHHHHHHHHhhCCCe
Q 020285 143 GLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDE-KKWND-LAQKVKEVVNEYPQL 220 (328)
Q Consensus 143 ~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~-~~~~~-~~~~v~~~l~~~~~l 220 (328)
.. +|.... . ..+...++...+.++....||+++|+|+++++||||.+++ +.... +.+.+.++... .++
T Consensus 81 ~~------~~~~~~--~-~~~~~~~~~~~l~~~~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~-~~~ 150 (244)
T TIGR00685 81 CQ------DWVNLT--E-KIPSWKVRANELREEITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILSF-TDL 150 (244)
T ss_pred cc------eeeech--h-hhhhHHHHHHHHHHHHhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhcC-CCE
Confidence 11 111111 1 0112233333333333344999999999999999999843 32222 22223333332 368
Q ss_pred EEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCC---CceEEEEcCCCCCccce
Q 020285 221 NWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKRE---QGFGILVSKFPKKTSAS 297 (328)
Q Consensus 221 ~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~---~g~~v~v~n~~~~t~A~ 297 (328)
.+..|+.++|++|. ++|||.+++.+++.+++..+ .+++|||+.||++||+.++... .+++|.|+.+..++.|+
T Consensus 151 ~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~~~~~~~---~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~ 226 (244)
T TIGR00685 151 EVMDGKAVVELKPR-FVNKGEIVKRLLWHQPGSGI---SPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAK 226 (244)
T ss_pred EEEECCeEEEEeeC-CCCHHHHHHHHHHhcccCCC---ceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCce
Confidence 88999999999999 99999999999999998765 7999999999999999994321 26899997667789999
Q ss_pred EEeCChhHHHHHHHHHH
Q 020285 298 YSLREPDEVMDFLQKLV 314 (328)
Q Consensus 298 ~~l~~~~~V~~~L~~l~ 314 (328)
|+++++++|..+|+.|+
T Consensus 227 ~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 227 FHLTGPQQVLEFLGLLV 243 (244)
T ss_pred EeCCCHHHHHHHHHHHh
Confidence 99999999999999875
No 7
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-38 Score=286.65 Aligned_cols=246 Identities=27% Similarity=0.448 Sum_probs=206.6
Q ss_pred HHHHHhh-cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcCC--EEEEcCCChhhHHhhhCcccceEecCC
Q 020285 57 HEITEAS-KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFP--TAIVTGRCRDKVYDFVKLAELYYAGSH 133 (328)
Q Consensus 57 ~~~~~~~-~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~--v~I~SGR~~~~v~~~~~~~~~~~i~~n 133 (328)
..+...+ +.+++++|+||||||+++..+|+.+.++++++++|++|+.+.+ ++|+|||+...+..++++++++++|+|
T Consensus 7 ~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aeh 86 (266)
T COG1877 7 NQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEH 86 (266)
T ss_pred hhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEec
Confidence 3444444 8899999999999999999999999999999999999999964 999999999999999999999999999
Q ss_pred CceeeCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHH
Q 020285 134 GMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEV 213 (328)
Q Consensus 134 G~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~ 213 (328)
|++++.+.+.. |+ . .....++.|++++.+.++++++++||+++|.|++++.||||++++++...........
T Consensus 87 Ga~~r~~~g~~-~~------~-~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~ 158 (266)
T COG1877 87 GAEVRDPNGKW-WI------N-LAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT 158 (266)
T ss_pred ceEEecCCCCe-eE------e-cCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHh
Confidence 99999887763 21 1 1234467788899999999999999999999999999999999886543332222222
Q ss_pred HhhCCC-eEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC
Q 020285 214 VNEYPQ-LNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK 292 (328)
Q Consensus 214 l~~~~~-l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~ 292 (328)
...+. ++++.|+.++|++|. ++|||.+++++++..+.... ++++.|||.+||+||+++++.. +++|-|+- .
T Consensus 159 -~~~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~~~~~~~---~~~~aGDD~TDE~~F~~v~~~~-~~~v~v~~--~ 230 (266)
T COG1877 159 -LINELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDELPFDGR---FPIFAGDDLTDEDAFAAVNKLD-SITVKVGV--G 230 (266)
T ss_pred -ccccccEEEEeCceEEEEeeC-CcchHHHHHHHHhcCCCCCC---cceecCCCCccHHHHHhhccCC-CceEEecC--C
Confidence 22233 889999999999999 99999999999999988764 8999999999999999997654 66776664 4
Q ss_pred CccceEEeCChhHHHHHHHHHHHhhh
Q 020285 293 KTSASYSLREPDEVMDFLQKLVRWKR 318 (328)
Q Consensus 293 ~t~A~~~l~~~~~V~~~L~~l~~~~~ 318 (328)
.|.|.+.+..+.....+|.++.....
T Consensus 231 ~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 231 STQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred cccccccccccHHHHHHHHHHHHHhh
Confidence 78999999888888888888887664
No 8
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=6.4e-37 Score=319.02 Aligned_cols=244 Identities=24% Similarity=0.344 Sum_probs=194.1
Q ss_pred HHHHHhh-cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhCc-ccceEecC
Q 020285 57 HEITEAS-KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVKL-AELYYAGS 132 (328)
Q Consensus 57 ~~~~~~~-~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~~-~~~~~i~~ 132 (328)
+.+++++ ++++++||+||||||+|... ....++++++++|++|++. +.|+|+|||++..+.++++. ++++++|+
T Consensus 585 ~~i~~~y~~~~~rlI~LDyDGTLlp~~~--~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaE 662 (854)
T PLN02205 585 EHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAE 662 (854)
T ss_pred HHHHHHHHhhcCeEEEEecCCcccCCcc--ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEe
Confidence 4567666 77899999999999998753 2457889999999999766 58999999999999999975 56899999
Q ss_pred CCceeeCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhH----HHHHH
Q 020285 133 HGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKW----NDLAQ 208 (328)
Q Consensus 133 nG~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~----~~~~~ 208 (328)
||++++.+++.. | ....+..+ ..+.+.+...+..+++++||+++|.+++++.||||.++++.. .++..
T Consensus 663 HG~~ir~~~~~~-w------~~~~~~~~-~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~ 734 (854)
T PLN02205 663 HGYFLRLKRDVE-W------ETCVPVAD-CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLD 734 (854)
T ss_pred CCEEEEeCCCce-e------eecchhhh-HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHH
Confidence 999998775432 2 11111111 123344555667788899999999999999999999977543 24555
Q ss_pred HHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHH---cCCCCCCCceEEEEeCCcCCHHHHHHHHhCCC----
Q 020285 209 KVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLEC---LGFADCSNVFPVYIGDDTTDEDAFKILRKREQ---- 281 (328)
Q Consensus 209 ~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~---lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~---- 281 (328)
++...+...+ +.+..|+.++||+|+ ++|||.|+++|++. +|+..+ +++||||+.|||+||+.+.....
T Consensus 735 ~l~~~l~~~~-~~v~~G~~vvEV~p~-gvnKG~Al~~Ll~~~~~~g~~~d---~vl~~GDD~nDedMF~~~~~~~~g~~~ 809 (854)
T PLN02205 735 HLESVLANEP-VTVKSGQNIVEVKPQ-GVSKGLVAKRLLSIMQERGMLPD---FVLCIGDDRSDEDMFEVITSSMAGPSI 809 (854)
T ss_pred HHHHHHhcCc-eEEEECCcEEEEEeC-CCCHHHHHHHHHHHHHhcCCCcc---cEEEEcCCccHHHHHHHhhhhccCCcc
Confidence 6666666554 678899999999999 99999999999864 577665 89999999999999999974211
Q ss_pred -----ceEEEEcCCCCCccceEEeCChhHHHHHHHHHHHhh
Q 020285 282 -----GFGILVSKFPKKTSASYSLREPDEVMDFLQKLVRWK 317 (328)
Q Consensus 282 -----g~~v~v~n~~~~t~A~~~l~~~~~V~~~L~~l~~~~ 317 (328)
+++|.||. ++|.|.|.++++++|..+|+.|+...
T Consensus 810 ~~~~~~~~v~VG~--~~S~A~y~L~d~~eV~~lL~~L~~~~ 848 (854)
T PLN02205 810 APRAEVFACTVGQ--KPSKAKYYLDDTAEIVRLMQGLASVS 848 (854)
T ss_pred cccccceeEEECC--CCccCeEecCCHHHHHHHHHHHHhcc
Confidence 48889984 67999999999999999999998643
No 9
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5.2e-35 Score=304.33 Aligned_cols=252 Identities=16% Similarity=0.226 Sum_probs=196.5
Q ss_pred HHHHHHhh-cCCCEEEEEecCCcccCCCCC---CCcccCChHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhCcccceE
Q 020285 56 FHEITEAS-KGKQIVMFLDYDGTLSPIVEN---PDRAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVKLAELYY 129 (328)
Q Consensus 56 ~~~~~~~~-~~k~~li~~D~DGTL~~~~~~---p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~~~~~~~ 129 (328)
.+.+...+ ++++++|||||||||+++..+ |..+.++++++++|++|+++ +.|+|+|||+...+.++++.+++++
T Consensus 495 ~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l 574 (797)
T PLN03063 495 EQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWL 574 (797)
T ss_pred HHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcE
Confidence 45666666 778999999999999998663 46678999999999999998 4899999999999999998778999
Q ss_pred ecCCCceeeCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHH
Q 020285 130 AGSHGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQK 209 (328)
Q Consensus 130 i~~nG~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~ 209 (328)
+|+||++++.+++. |.. ......+ ..|.+.+...++.+++++||+++|.|++++.||||+++++........
T Consensus 575 ~aeHG~~~r~~~~~--w~~-----~~~~~~~-~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~e 646 (797)
T PLN03063 575 AAENGMFLRHTSGE--WVT-----TMPEHMN-LDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARD 646 (797)
T ss_pred EEeCCEEEecCCCc--eee-----ccccccC-hhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHH
Confidence 99999999876432 210 1111101 245677888888899999999999999999999999977543222222
Q ss_pred -HHHHHhh---CCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCC---CCCCCceEEEEeCCc-CCHHHHHHHHhCC-
Q 020285 210 -VKEVVNE---YPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGF---ADCSNVFPVYIGDDT-TDEDAFKILRKRE- 280 (328)
Q Consensus 210 -v~~~l~~---~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~---~~~~~~~~i~~GD~~-nD~~Mf~~~~~~~- 280 (328)
+..+.+. .+++++..|++++||+|. ++|||.|++.|++.+.. .....++++|+||+. .||+||+++....
T Consensus 647 l~~~l~~~~~~~~~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~ 725 (797)
T PLN03063 647 MLQHLWAGPISNASVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEIL 725 (797)
T ss_pred HHHHHHHhhccCCCcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhcccccc
Confidence 2222222 246899999999999999 99999999999998621 111235999999985 5999999986421
Q ss_pred ---------------------------CceEEEEcCCCCCccceEEeCChhHHHHHHHHHHHhhh
Q 020285 281 ---------------------------QGFGILVSKFPKKTSASYSLREPDEVMDFLQKLVRWKR 318 (328)
Q Consensus 281 ---------------------------~g~~v~v~n~~~~t~A~~~l~~~~~V~~~L~~l~~~~~ 318 (328)
+-|+|.||. ++|.|+|.++++++|.++|+.|+....
T Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~--~~s~A~y~l~~~~eV~~lL~~l~~~~~ 788 (797)
T PLN03063 726 SKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ--ARTKARYVLDSSNDVVSLLHKLAVANT 788 (797)
T ss_pred ccccccccccccccccccccccccccCceEEEEECC--CCccCeecCCCHHHHHHHHHHHhccCc
Confidence 117788984 689999999999999999999996443
No 10
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=6.1e-35 Score=303.07 Aligned_cols=239 Identities=30% Similarity=0.436 Sum_probs=194.9
Q ss_pred HHHHHHhh-cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhCcccceEecC
Q 020285 56 FHEITEAS-KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVKLAELYYAGS 132 (328)
Q Consensus 56 ~~~~~~~~-~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~~~~~~~i~~ 132 (328)
++.+..++ .+++++|+|||||||+++..+|+.+.++++++++|++|+++ +.|+|+|||++..+.++++..++++||+
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liae 559 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAE 559 (726)
T ss_pred HHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEe
Confidence 56777777 77899999999999999887788888999999999999995 5899999999999999988667899999
Q ss_pred CCceeeCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHH----HHH
Q 020285 133 HGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWND----LAQ 208 (328)
Q Consensus 133 nG~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~----~~~ 208 (328)
||+.++.+++. |.. ....... +.+.+.+.+..+.+..+|+++|.+++++++||++++++.... +.+
T Consensus 560 nG~~i~~~~~~--w~~-----~~~~~~~---w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~ 629 (726)
T PRK14501 560 HGAWSRAPGGE--WQL-----LEPVATE---WKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELIL 629 (726)
T ss_pred CCEEEeCCCCc--eEE-----CCCcchh---HHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHH
Confidence 99999876543 110 1111223 345666667777788999999999999999999987654332 334
Q ss_pred HHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEc
Q 020285 209 KVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS 288 (328)
Q Consensus 209 ~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~ 288 (328)
.+...+.. ..+.+..|+.++||+|+ ++|||.|+++|++ +++.+ +++||||+.||++||+.++. .|++|+||
T Consensus 630 ~l~~~~~~-~~~~v~~g~~~veV~p~-~vnKG~al~~ll~--~~~~d---~vl~~GD~~nDe~Mf~~~~~--~~~~v~vG 700 (726)
T PRK14501 630 ALSSLLSN-APLEVLRGNKVVEVRPA-GVNKGRAVRRLLE--AGPYD---FVLAIGDDTTDEDMFRALPE--TAITVKVG 700 (726)
T ss_pred HHHHHhcC-CCeEEEECCeEEEEEEC-CCCHHHHHHHHHh--cCCCC---EEEEECCCCChHHHHHhccc--CceEEEEC
Confidence 44444433 35778889999999999 9999999999999 55554 89999999999999999853 37999999
Q ss_pred CCCCCccceEEeCChhHHHHHHHHHHH
Q 020285 289 KFPKKTSASYSLREPDEVMDFLQKLVR 315 (328)
Q Consensus 289 n~~~~t~A~~~l~~~~~V~~~L~~l~~ 315 (328)
| .++.|+|+++++++|+.+|++|+.
T Consensus 701 ~--~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 701 P--GESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred C--CCCcceEeCCCHHHHHHHHHHHhc
Confidence 8 468999999999999999999874
No 11
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5.5e-34 Score=296.36 Aligned_cols=252 Identities=18% Similarity=0.282 Sum_probs=197.8
Q ss_pred HHHHHHhh-cCCCEEEEEecCCcccCCCCCCC---------cccCChHHHHHHHHHHhc--CCEEEEcCCChhhHHhhhC
Q 020285 56 FHEITEAS-KGKQIVMFLDYDGTLSPIVENPD---------RAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 56 ~~~~~~~~-~~k~~li~~D~DGTL~~~~~~p~---------~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~~~ 123 (328)
.+.++..+ ++++++|||||||||+|++++|+ .+.++++++++|++|+++ +.|+|+|||+...+.++++
T Consensus 579 ~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 579 PEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred HHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 45666665 88899999999999999998887 667999999999999998 5899999999999999998
Q ss_pred cccceEecCCCceeeCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhH
Q 020285 124 LAELYYAGSHGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKW 203 (328)
Q Consensus 124 ~~~~~~i~~nG~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~ 203 (328)
..+++++|+||++++.+++. |.. ...... -..|.+.+...++.+++++||+++|.|++++.||||.++++..
T Consensus 659 ~~~L~LaAEHG~~~R~~~~~--w~~-----~~~~~~-~~~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g 730 (934)
T PLN03064 659 EFDMWLAAENGMFLRHTKGE--WMT-----TMPEHL-NMDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFG 730 (934)
T ss_pred CCCceEEeeCCeEEecCCCc--cee-----cccccc-chHHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhH
Confidence 77899999999999877543 210 111110 1246677888888999999999999999999999999976543
Q ss_pred HHHHHHHHHHH-hh---CCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCC---CCCceEEEEeCCcC-CHHHHHH
Q 020285 204 NDLAQKVKEVV-NE---YPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFAD---CSNVFPVYIGDDTT-DEDAFKI 275 (328)
Q Consensus 204 ~~~~~~v~~~l-~~---~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~---~~~~~~i~~GD~~n-D~~Mf~~ 275 (328)
...+..+.+.+ .. .+++++..|++++||+|. ++|||.|++.|++.+.-+. .+.|+++|+||+.+ ||+||++
T Consensus 731 ~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~-gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~ 809 (934)
T PLN03064 731 RLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPV-GVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTF 809 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcC-CCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHH
Confidence 33233332222 21 246899999999999999 9999999999999763111 13469999999875 9999999
Q ss_pred HHhCC---------------------------------------------------------------------------
Q 020285 276 LRKRE--------------------------------------------------------------------------- 280 (328)
Q Consensus 276 ~~~~~--------------------------------------------------------------------------- 280 (328)
+...-
T Consensus 810 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (934)
T PLN03064 810 FEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSV 889 (934)
T ss_pred HhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccccccccccccccCCccccCCcccccccc
Confidence 75310
Q ss_pred ------CceEEEEcCCCCCccceEEeCChhHHHHHHHHHHHhhh
Q 020285 281 ------QGFGILVSKFPKKTSASYSLREPDEVMDFLQKLVRWKR 318 (328)
Q Consensus 281 ------~g~~v~v~n~~~~t~A~~~l~~~~~V~~~L~~l~~~~~ 318 (328)
+-|+++|| .+.+.|.|.+++.++|..||..|.+...
T Consensus 890 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (934)
T PLN03064 890 LDLKGENYFSCAVG--RKRSNARYLLGSSDDVVSFLKELANASS 931 (934)
T ss_pred ccccCcceEEEEec--cccccceeecCCHHHHHHHHHHHhcccc
Confidence 12667777 4678999999999999999999986543
No 12
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.97 E-value=2.3e-30 Score=238.56 Aligned_cols=221 Identities=19% Similarity=0.202 Sum_probs=147.2
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh---Ccc--cceEecCCCceeeCC
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV---KLA--ELYYAGSHGMDIKGP 140 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~---~~~--~~~~i~~nG~~i~~~ 140 (328)
.+++|+|+||||++ ++..++++++++|++|+++ ++|+|+|||++..+.+++ ++. ..++|++||+.|+.+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLL-----PDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcC-----CCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 47999999999998 3457999999999999999 599999999999988775 332 247999999999864
Q ss_pred C-CCccccccCceeccCCCcccchHHHHHHHHHHHHhh-----cCCCcEEEecCcE-----------EEEEcCC------
Q 020285 141 T-KGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTK-----STPGARVENNKFC-----------ISVHFRC------ 197 (328)
Q Consensus 141 ~-~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~ie~~~~~-----------~~~~~r~------ 197 (328)
. +...+.. .. + .+.+.++.+.+...-. ...+.+....... ....+..
T Consensus 78 ~~~~~i~~~-----~l-~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (270)
T PRK10513 78 ADGETVAQT-----AL-S----YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDP 147 (270)
T ss_pred CCCCEEEec-----CC-C----HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccc
Confidence 3 3321110 00 0 1122333333322100 0001111100000 0000000
Q ss_pred ----------CChhhHHHHHHHHHHHHhhC-CCeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC
Q 020285 198 ----------VDEKKWNDLAQKVKEVVNEY-PQLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD 265 (328)
Q Consensus 198 ----------~~~~~~~~~~~~v~~~l~~~-~~l~~-~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD 265 (328)
.+++....+.+.+. +.+ ..+.+ .++..++||.|+ |+|||.||++|++.+|++.+ ++++|||
T Consensus 148 ~~~~~k~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~~gi~~~---~v~afGD 220 (270)
T PRK10513 148 NLQFPKVMMIDEPEILDAAIARIP---AEVKERYTVLKSAPYFLEILDK-RVNKGTGVKSLAEHLGIKPE---EVMAIGD 220 (270)
T ss_pred cCCceEEEEeCCHHHHHHHHHHhH---HHhcCcEEEEEecCeeEEEeCC-CCChHHHHHHHHHHhCCCHH---HEEEECC
Confidence 01111111111221 222 23554 356689999999 99999999999999999987 8999999
Q ss_pred CcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--ChhHHHHHHHHHH
Q 020285 266 DTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFLQKLV 314 (328)
Q Consensus 266 ~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~~~V~~~L~~l~ 314 (328)
+.||++||+.+ |+||+|+|+++ +..|+|++. +.+||+++|++++
T Consensus 221 ~~NDi~Ml~~a-----g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 221 QENDIAMIEYA-----GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred chhhHHHHHhC-----CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 99999999998 99999999985 478999985 5678999999876
No 13
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.97 E-value=2.4e-30 Score=237.90 Aligned_cols=223 Identities=22% Similarity=0.297 Sum_probs=150.2
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC---cccceEecCCCceeeCCC
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK---LAELYYAGSHGMDIKGPT 141 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---~~~~~~i~~nG~~i~~~~ 141 (328)
..+++++|+||||+. ++..++++++++|++++++ .+|+|+|||+...+.+++. +.. ++|++||+.|+.+
T Consensus 2 ~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~-~~I~~NGa~i~~~- 74 (264)
T COG0561 2 MIKLLAFDLDGTLLD-----SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG-PLITFNGALIYNG- 74 (264)
T ss_pred CeeEEEEcCCCCccC-----CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc-cEEEeCCeEEecC-
Confidence 458999999999999 3456999999999999998 5999999999999998874 333 7999999999998
Q ss_pred CCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcE-----------------EEEEcCCCChh---
Q 020285 142 KGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFC-----------------ISVHFRCVDEK--- 201 (328)
Q Consensus 142 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~-----------------~~~~~r~~~~~--- 201 (328)
++..+. .+-. ...+.++.+.+.... ............. ..+........
T Consensus 75 ~~~i~~--------~~l~--~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
T COG0561 75 GELLFQ--------KPLS--REDVEELLELLEDFQ-GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDN 143 (264)
T ss_pred CcEEee--------ecCC--HHHHHHHHHHHHhcc-CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcc
Confidence 432111 1111 123445554442210 0111111100000 00000000000
Q ss_pred ------hHHHHHHHHHH-HHhhCC--CeEEEecC-eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHH
Q 020285 202 ------KWNDLAQKVKE-VVNEYP--QLNWRQGR-MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDED 271 (328)
Q Consensus 202 ------~~~~~~~~v~~-~l~~~~--~l~~~~g~-~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~ 271 (328)
........+.+ +.+.++ .+.++++. .++||.|+ |+|||.||++|++.+|++.+ ++++|||+.||++
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~al~~l~~~lgi~~~---~v~afGD~~ND~~ 219 (264)
T COG0561 144 KIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYALQRLAKLLGIKLE---EVIAFGDSTNDIE 219 (264)
T ss_pred eEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHHHHHHHHHhCCCHH---HeEEeCCccccHH
Confidence 00112222222 223344 34455554 44999999 99999999999999999976 8999999999999
Q ss_pred HHHHHHhCCCceEEEEcCCCC--CccceEEeC--ChhHHHHHHHHHHH
Q 020285 272 AFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFLQKLVR 315 (328)
Q Consensus 272 Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~~~V~~~L~~l~~ 315 (328)
||+.+ |+||+|+|+++ +..|+|++. +.+||+++|++++.
T Consensus 220 Ml~~a-----g~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 220 MLEVA-----GLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred HHHhc-----CeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 99998 99999999964 478888764 66799999999864
No 14
>PRK10976 putative hydrolase; Provisional
Probab=99.97 E-value=4e-30 Score=236.60 Aligned_cols=219 Identities=19% Similarity=0.244 Sum_probs=145.4
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC-c-ccceEecCCCceeeCCCCC
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPTKG 143 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-~-~~~~~i~~nG~~i~~~~~~ 143 (328)
.+++++|+||||++ ++..++++++++|++++++ ++|+|+|||++..+.+++. + ...++||+||+.|+.+.+.
T Consensus 2 ikli~~DlDGTLl~-----~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 2 YQVVASDLDGTLLS-----PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred ceEEEEeCCCCCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 37899999999998 3457999999999999999 5999999999999988763 2 2347899999999975443
Q ss_pred ccccccCceeccCCCcccchHHHHHHHHHHHHhh------cCCCcEEEe--------------------------cC-cE
Q 020285 144 LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTK------STPGARVEN--------------------------NK-FC 190 (328)
Q Consensus 144 ~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~------~~~g~~ie~--------------------------~~-~~ 190 (328)
..+.. ... .+.+.++.+.+..... ...+.++.. .. ..
T Consensus 77 ~i~~~-----~l~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~k 146 (266)
T PRK10976 77 LIFSH-----NLD-----RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSK 146 (266)
T ss_pred Eehhh-----cCC-----HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceE
Confidence 22111 000 0122333332211000 000001000 00 00
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHhhCC-CeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcC
Q 020285 191 ISVHFRCVDEKKWNDLAQKVKEVVNEYP-QLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTT 268 (328)
Q Consensus 191 ~~~~~r~~~~~~~~~~~~~v~~~l~~~~-~l~~-~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~n 268 (328)
+.+.. .++.....+.+.+. +.+. .+.+ .++..++||.|+ ++|||.||++|++.+|++.+ ++++|||+.|
T Consensus 147 i~~~~--~~~~~~~~~~~~l~---~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~lgi~~~---~viafGD~~N 217 (266)
T PRK10976 147 VFFTC--DSHEKLLPLEQAIN---ARWGDRVNVSFSTLTCLEVMAG-GVSKGHALEAVAKKLGYSLK---DCIAFGDGMN 217 (266)
T ss_pred EEEEc--CCHHHHHHHHHHHH---HHhCCcEEEEEeCCceEEEEcC-CCChHHHHHHHHHHcCCCHH---HeEEEcCCcc
Confidence 00000 01111112222222 2222 3554 355679999999 99999999999999999987 8999999999
Q ss_pred CHHHHHHHHhCCCceEEEEcCCCC--Cccce--EEeC--ChhHHHHHHHHHH
Q 020285 269 DEDAFKILRKREQGFGILVSKFPK--KTSAS--YSLR--EPDEVMDFLQKLV 314 (328)
Q Consensus 269 D~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~--~~l~--~~~~V~~~L~~l~ 314 (328)
|++||+.+ |+||+|+|+.. +..|+ +++. +.+||+++|++++
T Consensus 218 Di~Ml~~a-----g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 218 DAEMLSMA-----GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred cHHHHHHc-----CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 99999998 99999999985 46665 7764 5679999999886
No 15
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.97 E-value=4e-30 Score=237.58 Aligned_cols=220 Identities=16% Similarity=0.209 Sum_probs=146.3
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCc--ccceEecCCCceeeCCCCC
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKL--AELYYAGSHGMDIKGPTKG 143 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~--~~~~~i~~nG~~i~~~~~~ 143 (328)
.+++|+|+||||++ ++..++++++++|++|+++ +.|+|+|||++..+.+++.. ...++||+||+.|+...+.
T Consensus 2 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 2 ARLAAFDMDGTLLM-----PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred ccEEEEeCCCcCcC-----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 36899999999998 3457999999999999999 59999999999999887632 2347899999999975443
Q ss_pred ccccccCceeccCCCcccchHHHHHHHHHHHHh-----hcCCCcEEEe--------------------------cC-cEE
Q 020285 144 LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKT-----KSTPGARVEN--------------------------NK-FCI 191 (328)
Q Consensus 144 ~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~-----~~~~g~~ie~--------------------------~~-~~~ 191 (328)
..+... + . .+.+.++.+.+...- ....+.+... .. ..+
T Consensus 77 ~l~~~~---i----~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 146 (272)
T PRK15126 77 LLHRQD---L----P---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKI 146 (272)
T ss_pred EEEeec---C----C---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEE
Confidence 222110 0 0 112233333221100 0000000000 00 000
Q ss_pred EEEcCCCChhhHHHHHHHHHHHHhhCCCeEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCH
Q 020285 192 SVHFRCVDEKKWNDLAQKVKEVVNEYPQLNWR-QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDE 270 (328)
Q Consensus 192 ~~~~r~~~~~~~~~~~~~v~~~l~~~~~l~~~-~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~ 270 (328)
.+ + .+++....+.+.+.+.+. ..+.+. ++..++||.|+ ++|||.||++|++.+|++.+ ++++|||+.||+
T Consensus 147 ~~-~--~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~eI~~~-g~sKg~al~~l~~~~gi~~~---~v~afGD~~NDi 217 (272)
T PRK15126 147 CF-C--GDHDDLTRLQIQLNEALG--ERAHLCFSATDCLEVLPV-GCNKGAALAVLSQHLGLSLA---DCMAFGDAMNDR 217 (272)
T ss_pred EE-E--CCHHHHHHHHHHHHHHhc--CCEEEEEcCCcEEEeecC-CCChHHHHHHHHHHhCCCHH---HeEEecCCHHHH
Confidence 00 0 011122222222222221 235543 45679999999 99999999999999999987 899999999999
Q ss_pred HHHHHHHhCCCceEEEEcCCCC--CccceE--EeC--ChhHHHHHHHHHHH
Q 020285 271 DAFKILRKREQGFGILVSKFPK--KTSASY--SLR--EPDEVMDFLQKLVR 315 (328)
Q Consensus 271 ~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~--~l~--~~~~V~~~L~~l~~ 315 (328)
+||+.+ |+||+|+|+.+ +..|+| ++. +.+||+++|++++.
T Consensus 218 ~Ml~~a-----g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 218 EMLGSV-----GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred HHHHHc-----CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 999998 89999999975 466775 654 56799999999983
No 16
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.97 E-value=4.6e-29 Score=230.63 Aligned_cols=227 Identities=15% Similarity=0.212 Sum_probs=148.9
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh---CcccceEecCCCceeeCCC
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPT 141 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~---~~~~~~~i~~nG~~i~~~~ 141 (328)
.+++||+|+||||++ ++..++++++++|++|+++ ++|+|+|||+...+.+++ ++...++|++||+.|+.+.
T Consensus 6 ~~~lI~~DlDGTLL~-----~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLD-----SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcC-----CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 468999999999998 2456899999999999999 599999999999998875 3433579999999999764
Q ss_pred CCccccccCceeccCCCcccchHHHHHHHHHHHHhhc----C-----------CCcE-----EEe-cCcEEEEEcCCCCh
Q 020285 142 KGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKS----T-----------PGAR-----VEN-NKFCISVHFRCVDE 200 (328)
Q Consensus 142 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~----~-----------~g~~-----ie~-~~~~~~~~~r~~~~ 200 (328)
+... ... . ..++..-. .+.+.++.+.+...... . .+.. ++. ......+.+.. ++
T Consensus 81 ~~~~-~~~-~-~~~~~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 155 (271)
T PRK03669 81 QWQD-HPD-F-PRIISGIS-HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRD-SD 155 (271)
T ss_pred cccC-CCC-c-eEeecCCC-HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecC-CH
Confidence 3110 000 0 00000000 12233333333221000 0 0000 000 00001111111 11
Q ss_pred hhHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCC---CCCCCceEEEEeCCcCCHHHHHHHH
Q 020285 201 KKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGF---ADCSNVFPVYIGDDTTDEDAFKILR 277 (328)
Q Consensus 201 ~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~---~~~~~~~~i~~GD~~nD~~Mf~~~~ 277 (328)
. ....+.+.+.. .++.++.+..++||.|+ ++|||.||++|++++|+ +.+ ++++|||+.||++||+.+
T Consensus 156 ~----~~~~~~~~l~~-~~~~~~~~~~~iEi~~~-g~sKg~al~~l~~~lgi~~~~~~---~viafGDs~NDi~Ml~~a- 225 (271)
T PRK03669 156 E----RMAQFTARLAE-LGLQFVQGARFWHVLDA-SAGKDQAANWLIATYQQLSGTRP---TTLGLGDGPNDAPLLDVM- 225 (271)
T ss_pred H----HHHHHHHHHHH-CCCEEEecCeeEEEecC-CCCHHHHHHHHHHHHHhhcCCCc---eEEEEcCCHHHHHHHHhC-
Confidence 1 11223333333 25666656679999999 99999999999999999 766 899999999999999998
Q ss_pred hCCCceEEEEcCCCC--------CccceEEeC--ChhHHHHHHHHHHHh
Q 020285 278 KREQGFGILVSKFPK--------KTSASYSLR--EPDEVMDFLQKLVRW 316 (328)
Q Consensus 278 ~~~~g~~v~v~n~~~--------~t~A~~~l~--~~~~V~~~L~~l~~~ 316 (328)
|+||+|+|+.. +..|.|+++ +++|+.+.|++++..
T Consensus 226 ----g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 226 ----DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred ----CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 99999997652 126889986 567999999998853
No 17
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.97 E-value=1.5e-29 Score=227.52 Aligned_cols=213 Identities=21% Similarity=0.272 Sum_probs=147.0
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh---CcccceEecCCCceeeCCC-
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPT- 141 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~---~~~~~~~i~~nG~~i~~~~- 141 (328)
.++||+|+||||++ ++..++++++++|++|++. ++|+|+|||+...+.+++ +++ .++|++||+.|+.+.
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~-~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 3 IKAIAIDIDGTITD-----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS-GPVIAENGGVISVGFD 76 (230)
T ss_pred eeEEEEecCCCcCC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC-CcEEEecCeEEEEcCC
Confidence 47899999999998 3456999999999999998 599999999999988764 433 479999999998763
Q ss_pred CCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEe--cCcE--EEEEcCCCChhhHHHHHHHHHHHHhhC
Q 020285 142 KGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVEN--NKFC--ISVHFRCVDEKKWNDLAQKVKEVVNEY 217 (328)
Q Consensus 142 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~--~~~~--~~~~~r~~~~~~~~~~~~~v~~~l~~~ 217 (328)
+...+ ..+ ++...++.+.+....... ...+.. .... ....++..+ .+.+.+.++.+
T Consensus 77 ~~~~~--------~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~ 136 (230)
T PRK01158 77 GKRIF--------LGD----IEECEKAYSELKKRFPEA-STSLTKLDPDYRKTEVALRRTVP-------VEEVRELLEEL 136 (230)
T ss_pred CCEEE--------Ecc----hHHHHHHHHHHHHhcccc-ceeeecCCcccccceeeeccccc-------HHHHHHHHHHc
Confidence 22111 111 112233333332211000 000100 0000 001111111 12233344443
Q ss_pred C-CeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--Cc
Q 020285 218 P-QLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KT 294 (328)
Q Consensus 218 ~-~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t 294 (328)
. .+.+..+..++||.|+ ++|||.|++++++.+|++.+ ++++|||+.||++||+.+ |++|+|+|+.. +.
T Consensus 137 ~~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~vk~ 207 (230)
T PRK01158 137 GLDLEIVDSGFAIHIKSP-GVNKGTGLKKLAELMGIDPE---EVAAIGDSENDLEMFEVA-----GFGVAVANADEELKE 207 (230)
T ss_pred CCcEEEEecceEEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHHHHhc-----CceEEecCccHHHHH
Confidence 2 3555555678999999 99999999999999999876 899999999999999998 89999999985 47
Q ss_pred cceEEeC--ChhHHHHHHHHHH
Q 020285 295 SASYSLR--EPDEVMDFLQKLV 314 (328)
Q Consensus 295 ~A~~~l~--~~~~V~~~L~~l~ 314 (328)
.|+|++. +.+||+++|++++
T Consensus 208 ~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 208 AADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred hcceEecCCCcChHHHHHHHHh
Confidence 8999985 5678999999875
No 18
>PLN02887 hydrolase family protein
Probab=99.96 E-value=2.1e-28 Score=245.62 Aligned_cols=227 Identities=21% Similarity=0.222 Sum_probs=151.0
Q ss_pred HHHhhcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC---ccc--------
Q 020285 59 ITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK---LAE-------- 126 (328)
Q Consensus 59 ~~~~~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---~~~-------- 126 (328)
.++.++.+.++||+|+||||++ ++..++++++++|++++++ +.|+|||||++..+..++. +..
T Consensus 300 ~~~~~~~~iKLIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYKPKFSYIFCDMDGTLLN-----SKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhccCccEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 3445677789999999999998 3467999999999999999 5999999999999887653 321
Q ss_pred ceEecCCCceeeCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhh-----cCCCcEEEec--------------
Q 020285 127 LYYAGSHGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTK-----STPGARVENN-------------- 187 (328)
Q Consensus 127 ~~~i~~nG~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~ie~~-------------- 187 (328)
.++|++||+.|++..+...+.. .+. .+.+.++.+.+..... ...+.+....
T Consensus 375 ~p~I~~NGA~I~d~~g~~I~~~-----~L~-----~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~ 444 (580)
T PLN02887 375 SPGVFLQGLLVYGRQGREIYRS-----NLD-----QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEP 444 (580)
T ss_pred ccEEeecCeEEEECCCcEEEEE-----eCC-----HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccc
Confidence 2466789999986544322211 000 1223333333221100 0001110000
Q ss_pred ---------------CcEEEEEcCCCChhhHHHHHHHHHHHHh-hCC-CeEE-EecCeEEEEEcCCCCCHHHHHHHHHHH
Q 020285 188 ---------------KFCISVHFRCVDEKKWNDLAQKVKEVVN-EYP-QLNW-RQGRMVMEIRPKIEWDKGKALEFLLEC 249 (328)
Q Consensus 188 ---------------~~~~~~~~r~~~~~~~~~~~~~v~~~l~-~~~-~l~~-~~g~~~lEI~p~~~~~KG~al~~Ll~~ 249 (328)
.+.. +-+.. .+ ....+.+.+.+. .+. .+.+ .++..++||.|+ ++|||.||++|++.
T Consensus 445 ~~~~i~~l~~~~~~~~i~K-i~~~~-~~---e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~-gvSKG~ALk~L~e~ 518 (580)
T PLN02887 445 KAEIMSSVDQLLAAADIQK-VIFLD-TA---EGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPP-GTSKGNGVKMLLNH 518 (580)
T ss_pred cccccCCHHHhhcccCeeE-EEEEc-Ch---HHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecC-CCCHHHHHHHHHHH
Confidence 0000 00000 00 011112222222 222 3554 356689999999 99999999999999
Q ss_pred cCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--ChhHHHHHHHHHH
Q 020285 250 LGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFLQKLV 314 (328)
Q Consensus 250 lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~~~V~~~L~~l~ 314 (328)
+|++.+ ++++|||+.||++||+.+ |+||+|+|+.. +..|+|++. +.+||+++|++++
T Consensus 519 lGI~~e---eviAFGDs~NDIeMLe~A-----G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 519 LGVSPD---EIMAIGDGENDIEMLQLA-----SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred cCCCHH---HEEEEecchhhHHHHHHC-----CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 999987 899999999999999998 99999999985 578999985 5679999999874
No 19
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.96 E-value=6.7e-29 Score=219.63 Aligned_cols=197 Identities=23% Similarity=0.350 Sum_probs=143.2
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCcccceEecCCCceeeCCCCCcccc
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKGLKYN 147 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~i~~~~~~~~~~ 147 (328)
++++||||||++. +...++++++++|++|+++ .+++|+|||+...+.++++..+.+++++||+.|+.+++.. +.
T Consensus 1 li~~D~DgTL~~~----~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~-~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLDP----NAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEIL-YI 75 (204)
T ss_pred CEEEeCcCCCcCC----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEE-EE
Confidence 5899999999982 2257999999999999999 5999999999999999886555789999999999764321 11
Q ss_pred ccCceeccCCCcccchHH---HHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCC--ChhhHHHHHHHHHHHHhhCCCeEE
Q 020285 148 QKSKVVNFQPASEFLPLI---DKVYKVLVEKTKSTPGARVENNKFCISVHFRCV--DEKKWNDLAQKVKEVVNEYPQLNW 222 (328)
Q Consensus 148 ~~~e~~~~~~~~~~~~~i---~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~--~~~~~~~~~~~v~~~l~~~~~l~~ 222 (328)
. +...+..++ +++...+..+....++..+|.+..++.++++.. .+.....+...++.....++++.+
T Consensus 76 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (204)
T TIGR01484 76 E--------PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEA 147 (204)
T ss_pred c--------ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEE
Confidence 0 111111111 122222222234556777888889999998875 111122233333322111356777
Q ss_pred E-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEE
Q 020285 223 R-QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILV 287 (328)
Q Consensus 223 ~-~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v 287 (328)
. ++..++||+|+ +++||.|++++++.++++.+ ++++|||+.||++||+.+ |++|+|
T Consensus 148 ~~s~~~~~ev~p~-~~~K~~~~~~~~~~~~~~~~---~~~~~GD~~nD~~~~~~~-----~~~vam 204 (204)
T TIGR01484 148 IYVGKTDLEVLPA-GVDKGSALQALLKELNGKRD---EILAFGDSGNDEEMFEVA-----GLAVAV 204 (204)
T ss_pred EEecCCEEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCHHHHHHHHHc-----CCceEC
Confidence 7 68899999999 99999999999999998876 899999999999999998 888886
No 20
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.96 E-value=4.4e-28 Score=218.43 Aligned_cols=211 Identities=26% Similarity=0.410 Sum_probs=142.9
Q ss_pred EEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCcc--cceEecCCCceeeCCCCCccc
Q 020285 70 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKLA--ELYYAGSHGMDIKGPTKGLKY 146 (328)
Q Consensus 70 i~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~~--~~~~i~~nG~~i~~~~~~~~~ 146 (328)
||+|+||||++ +...++++++++|++|+++ ++++|+|||++..+.+++... ..++|++||+.+..+.+...+
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~ 75 (254)
T PF08282_consen 1 IFSDLDGTLLN-----SDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILY 75 (254)
T ss_dssp EEEECCTTTCS-----TTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEE
T ss_pred cEEEECCceec-----CCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccch
Confidence 68999999998 3456999999999999998 599999999999999987532 358999999999555443221
Q ss_pred cccCceeccCCCcccchHHHHHHHHHHHHhh-----cCCCcEEEec-----------------------------CcEEE
Q 020285 147 NQKSKVVNFQPASEFLPLIDKVYKVLVEKTK-----STPGARVENN-----------------------------KFCIS 192 (328)
Q Consensus 147 ~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~ie~~-----------------------------~~~~~ 192 (328)
.. .+. ...+.++.+.+..... ...+.++... -..+.
T Consensus 76 ~~-----~i~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~ 145 (254)
T PF08282_consen 76 EK-----PID-----SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL 145 (254)
T ss_dssp EE-----SB------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE
T ss_pred hh-----hee-----ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee
Confidence 10 010 1233444444332110 0001111111 00011
Q ss_pred EEcCCCChhhHHHHHHHHHHHHhhCCCe-E-EEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCH
Q 020285 193 VHFRCVDEKKWNDLAQKVKEVVNEYPQL-N-WRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDE 270 (328)
Q Consensus 193 ~~~r~~~~~~~~~~~~~v~~~l~~~~~l-~-~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~ 270 (328)
++ .++.....+.+.+.+ .+++. . +..+..++||.|+ ++|||.|+++|++.+|++.+ ++++|||+.||+
T Consensus 146 ~~---~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~lei~~~-~vsK~~ai~~l~~~~~i~~~---~~~~~GD~~ND~ 215 (254)
T PF08282_consen 146 FF---PDPEDLEQLREELKK---KFPNLIDVVRSSPYFLEITPK-GVSKGSAIKYLLEYLGISPE---DIIAFGDSENDI 215 (254)
T ss_dssp EE---SCHHHHHHHHHHHHH---HHTTTEEEEEEETTEEEEEET-TSSHHHHHHHHHHHHTTSGG---GEEEEESSGGGH
T ss_pred cc---ccchhhhhhhhhhcc---ccCcceeEEEecccceEEeeC-CCCHHHHHHHHhhhcccccc---eeEEeecccccH
Confidence 00 011122233333333 33332 3 4567899999999 99999999999999999987 899999999999
Q ss_pred HHHHHHHhCCCceEEEEcCCCC--CccceEEeCC--hhHHHHHH
Q 020285 271 DAFKILRKREQGFGILVSKFPK--KTSASYSLRE--PDEVMDFL 310 (328)
Q Consensus 271 ~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~~--~~~V~~~L 310 (328)
+||+.+ |+||+|+|+.+ +..|+|++.+ .++|+++|
T Consensus 216 ~Ml~~~-----~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 216 EMLELA-----GYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp HHHHHS-----SEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred hHHhhc-----CeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 999998 99999999986 4789999863 36888775
No 21
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.96 E-value=1.5e-27 Score=219.75 Aligned_cols=223 Identities=21% Similarity=0.238 Sum_probs=144.9
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC-c-ccceEecCCCceeeCCC-C
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPT-K 142 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-~-~~~~~i~~nG~~i~~~~-~ 142 (328)
.++||+|+||||++ ++..++++++++|++++++ +.|+|||||++..+.+++. + ...++|++||+.|+... +
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 3 YRVIALDLDGTLLT-----PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred ccEEEEeCCCceEC-----CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 47899999999998 3457999999999999999 5999999999999888763 2 23479999999999753 3
Q ss_pred CccccccCceeccCCCcccchHHHHHHHHHHHHhh-----cCCCcEEEecC--------cEEEE------EcCCCCh---
Q 020285 143 GLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTK-----STPGARVENNK--------FCISV------HFRCVDE--- 200 (328)
Q Consensus 143 ~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~ie~~~--------~~~~~------~~r~~~~--- 200 (328)
...+.. ... .+.+.++.+.+....- ...+.+..... +.... .+..+.+
T Consensus 78 ~~l~~~-----~l~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (272)
T PRK10530 78 KVLEAD-----PLP-----VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQ 147 (272)
T ss_pred EEEEec-----CCC-----HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHH
Confidence 221110 000 1223334433322100 00000000000 00000 0000000
Q ss_pred ---------------hhHHHHHHHHHHHHhhCCCeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEe
Q 020285 201 ---------------KKWNDLAQKVKEVVNEYPQLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIG 264 (328)
Q Consensus 201 ---------------~~~~~~~~~v~~~l~~~~~l~~-~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~G 264 (328)
.....+.+..+.+.+.+ ++.+ .++..++||.|. +++||.|++++++.+|++.+ ++++||
T Consensus 148 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~~gi~~~---e~i~~G 222 (272)
T PRK10530 148 AARQVNAIWKFALTHEDLPQLQHFAKHVEHEL-GLECEWSWHDQVDIARK-GNSKGKRLTQWVEAQGWSMK---NVVAFG 222 (272)
T ss_pred HHhhcCCcEEEEEecCCHHHHHHHHHHHhhhc-CceEEEecCceEEEecC-CCChHHHHHHHHHHcCCCHH---HeEEeC
Confidence 00001111122223333 3443 234568999999 99999999999999999986 899999
Q ss_pred CCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--ChhHHHHHHHHHH
Q 020285 265 DDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFLQKLV 314 (328)
Q Consensus 265 D~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~~~V~~~L~~l~ 314 (328)
|+.||++||+.+ |+||+|+|+.. +..|+|++. +.+||+++|++++
T Consensus 223 D~~NDi~m~~~a-----g~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 223 DNFNDISMLEAA-----GLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CChhhHHHHHhc-----CceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 999999999998 89999999864 367999985 5678999999875
No 22
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.95 E-value=3.4e-27 Score=215.48 Aligned_cols=228 Identities=16% Similarity=0.199 Sum_probs=153.7
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhh---Ccc-cceEecCCCceeeCCC
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLA-ELYYAGSHGMDIKGPT 141 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~---~~~-~~~~i~~nG~~i~~~~ 141 (328)
+.+|++|+||||+++.+ .+..++++++++++++.+++ +|+++|||+...+.++. +++ +-++|++||+.|+.++
T Consensus 1 ~~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCC
Confidence 46899999999998542 23568899999999999985 99999999999998874 432 2358999999999754
Q ss_pred CCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCC-Ce
Q 020285 142 KGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYP-QL 220 (328)
Q Consensus 142 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~-~l 220 (328)
.. .....|..+ ....|. .+.+......+....+....+.+.+.+.+.+. +.....+.+.+.+.+..+. .+
T Consensus 79 ~~---~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~---~~~~~~~~~~l~~~l~~~~~~~ 149 (249)
T TIGR01485 79 AE---VPDQHWAEY-LSEKWQ--RDIVVAITDKFEELKPQPDLEQRPHKVSFFLD---PEAAPEVIKQLTEMLKETGLDV 149 (249)
T ss_pred CC---cCCHHHHHH-HhcccC--HHHHHHHHhcCcccccCCccccCCeeEEEEec---hhhhhHHHHHHHHHHHhcCCCE
Confidence 21 111111111 111222 12233332222222233333444455555533 2222334455566665542 34
Q ss_pred E-EEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCC--cc--
Q 020285 221 N-WRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TS-- 295 (328)
Q Consensus 221 ~-~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~--t~-- 295 (328)
. +.++..++||.|+ +++||.|+++|++.+|++.+ .+++|||+.||++||+.+ .+++|+|+|+.++ ..
T Consensus 150 ~~~~~~~~~ldi~~~-~~~K~~al~~l~~~~~i~~~---~~i~~GD~~ND~~ml~~~----~~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 150 KLIYSSGKDLDILPQ-GSGKGQALQYLLQKLAMEPS---QTLVCGDSGNDIELFEIG----SVRGVIVSNAQEELLQWYD 221 (249)
T ss_pred EEEEECCceEEEEeC-CCChHHHHHHHHHHcCCCcc---CEEEEECChhHHHHHHcc----CCcEEEECCCHHHHHHHHH
Confidence 4 3567789999999 99999999999999999876 899999999999999984 1689999999743 22
Q ss_pred -----ceEEeC--ChhHHHHHHHHH
Q 020285 296 -----ASYSLR--EPDEVMDFLQKL 313 (328)
Q Consensus 296 -----A~~~l~--~~~~V~~~L~~l 313 (328)
..|+++ .++|+++.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 222 ENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred hcccCcEEEecCCCcHHHHHHHHHc
Confidence 227665 578999998875
No 23
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.95 E-value=2.3e-27 Score=212.57 Aligned_cols=211 Identities=20% Similarity=0.249 Sum_probs=138.8
Q ss_pred EEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC-c-ccceEecCCCceeeCCCCC-cc
Q 020285 70 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPTKG-LK 145 (328)
Q Consensus 70 i~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-~-~~~~~i~~nG~~i~~~~~~-~~ 145 (328)
|++|+||||++ ++..++++++++|+++++. ++|+|||||++..+.+++. + ...++|++||+.|+...+. ..
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 75 (225)
T TIGR01482 1 IASDIDGTLTD-----PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDI 75 (225)
T ss_pred CeEeccCccCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceE
Confidence 58999999998 3457999999999999999 5999999999999887653 2 2457999999999876532 11
Q ss_pred ccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCC-CeEEEe
Q 020285 146 YNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYP-QLNWRQ 224 (328)
Q Consensus 146 ~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~-~l~~~~ 224 (328)
+. . .....| ................-........ ..+.+ ..+.+ .+..+++.+. .+.+.+
T Consensus 76 ~~------~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~ 136 (225)
T TIGR01482 76 FL------A-YLEEEW---FLDIVIAKTFPFSRLKVQYPRRASL-VKMRY-GIDVD-------TVREIIKELGLNLVAVD 136 (225)
T ss_pred Ee------c-ccCHHH---HHHHHHhcccchhhhccccccccce-EEEee-cCCHH-------HHHHHHHhcCceEEEec
Confidence 11 0 011111 1111110000000000000000001 11111 11111 1223333332 233334
Q ss_pred cCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC-
Q 020285 225 GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR- 301 (328)
Q Consensus 225 g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~- 301 (328)
+..++||.|+ +++||.||+++++.+|++.+ ++++|||+.||++||+.+ |++|+|+|+.+ +..|+|++.
T Consensus 137 ~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 137 SGFDIHILPQ-GVNKGVAVKKLKEKLGIKPG---ETLVCGDSENDIDLFEVP-----GFGVAVANAQPELKEWADYVTES 207 (225)
T ss_pred CCcEEEEeeC-CCCHHHHHHHHHHHhCCCHH---HEEEECCCHhhHHHHHhc-----CceEEcCChhHHHHHhcCeecCC
Confidence 5679999999 99999999999999999876 899999999999999998 99999999975 478999985
Q ss_pred -ChhH----HHHHHHHH
Q 020285 302 -EPDE----VMDFLQKL 313 (328)
Q Consensus 302 -~~~~----V~~~L~~l 313 (328)
+.++ |.++|+++
T Consensus 208 ~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 208 PYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCcHHHHHHHHHHhh
Confidence 4567 88888765
No 24
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.95 E-value=1.2e-26 Score=212.68 Aligned_cols=219 Identities=19% Similarity=0.202 Sum_probs=141.9
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCcc--cceEecCCCceeeCCCCCcc
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKLA--ELYYAGSHGMDIKGPTKGLK 145 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~~--~~~~i~~nG~~i~~~~~~~~ 145 (328)
++|+|+||||+.. ...+.+.++++|++|++. .+|+|+|||+...+..++... ..++||+||+.|+.+.+...
T Consensus 1 li~~DlDGTll~~-----~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~ 75 (256)
T TIGR01486 1 WIFTDLDGTLLDP-----HGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFT 75 (256)
T ss_pred CEEEcCCCCCcCC-----CCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCccc
Confidence 5899999999983 232445799999999998 599999999999998876321 24799999999998654321
Q ss_pred ccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEE----------------------ecCcEEEEEcCCCChhhH
Q 020285 146 YNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVE----------------------NNKFCISVHFRCVDEKKW 203 (328)
Q Consensus 146 ~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie----------------------~~~~~~~~~~r~~~~~~~ 203 (328)
.. ..|+ ++..-. .+.+.++++.+..... ..-.... ...+...+.+ ++
T Consensus 76 ~~--~~~~-~~~~i~-~~~~~~il~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 144 (256)
T TIGR01486 76 EP--EYPV-IALGIP-YEKIRARLEELSEELG-FKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW---SE--- 144 (256)
T ss_pred CC--CeEE-EEcCCC-HHHHHHHHHHHHHHhC-CCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec---Ch---
Confidence 00 0011 111111 1223344433211100 0000000 0000000001 11
Q ss_pred HHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCC--CCCCceEEEEeCCcCCHHHHHHHHhCCC
Q 020285 204 NDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFA--DCSNVFPVYIGDDTTDEDAFKILRKREQ 281 (328)
Q Consensus 204 ~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~--~~~~~~~i~~GD~~nD~~Mf~~~~~~~~ 281 (328)
+..+.+.+.+... ++.+..+..++||.|+ +++||.|+++|++.+|++ .+ ++++|||+.||++||+.+
T Consensus 145 -~~~~~~~~~~~~~-~~~~~~s~~~~ei~~~-~~~Kg~ai~~l~~~~~i~~~~~---~~~a~GD~~ND~~Ml~~a----- 213 (256)
T TIGR01486 145 -ERRERFTEALVEL-GLEVTHGNRFYHVLGA-GSDKGKAANALKQFYNQPGGAI---KVVGLGDSPNDLPLLEVV----- 213 (256)
T ss_pred -HHHHHHHHHHHHc-CCEEEeCCceEEEecC-CCCHHHHHHHHHHHHhhcCCCc---eEEEEcCCHhhHHHHHHC-----
Confidence 1223334444443 4666555679999999 999999999999999998 65 899999999999999998
Q ss_pred ceEEEEcCCCC-----Ccc--c-eEEeC--ChhHHHHHHHHHH
Q 020285 282 GFGILVSKFPK-----KTS--A-SYSLR--EPDEVMDFLQKLV 314 (328)
Q Consensus 282 g~~v~v~n~~~-----~t~--A-~~~l~--~~~~V~~~L~~l~ 314 (328)
|+||+|+|++. +.. | .|++. +.+||++.|++++
T Consensus 214 g~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~~ 256 (256)
T TIGR01486 214 DLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHLL 256 (256)
T ss_pred CEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHhC
Confidence 99999999962 344 4 48884 5789999999874
No 25
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.95 E-value=4e-27 Score=210.24 Aligned_cols=207 Identities=24% Similarity=0.305 Sum_probs=139.4
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCc--ccceEecCCCceeeCCCCCc
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKL--AELYYAGSHGMDIKGPTKGL 144 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~--~~~~~i~~nG~~i~~~~~~~ 144 (328)
+++|+|+||||+. ++..++++++++|++|++. .+|+|+|||++..+.+++.. ...++|++||+.|+.+....
T Consensus 2 k~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 2 KLVAIDIDGTLTE-----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred cEEEEecCCCcCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 5899999999997 3457999999999999999 59999999999998887532 23378999999999865321
Q ss_pred cccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCCCeEEEe
Q 020285 145 KYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYPQLNWRQ 224 (328)
Q Consensus 145 ~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~~l~~~~ 224 (328)
. .......+.. ...... .+....-.... ......+.. ..... +.+.+.++. .++.+..
T Consensus 77 -~-------~~~~~~~~~~--~~~~~~--~~~~~~~~~~~--~~~~~~~~~---~~~~~----~~~~~~l~~-~~~~~~~ 134 (215)
T TIGR01487 77 -F-------LANMEEEWFL--DEEKKK--RFPRDRLSNEY--PRASLVIMR---EGKDV----DEVREIIKE-RGLNLVD 134 (215)
T ss_pred -E-------EecccchhhH--HHhhhh--hhhhhhccccc--ceeEEEEec---CCccH----HHHHHHHHh-CCeEEEe
Confidence 0 0011111110 000000 00000000000 001111111 11111 223334443 3566555
Q ss_pred cCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC-
Q 020285 225 GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR- 301 (328)
Q Consensus 225 g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~- 301 (328)
+..++||.|. +++||.|++++++.+|++.+ ++++|||+.||++||+.+ |++|+|+|+.+ +..|+|++.
T Consensus 135 ~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~iGDs~ND~~ml~~a-----g~~vam~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 135 SGFAIHIMKK-GVDKGVGVEKLKELLGIKPE---EVAAIGDSENDIDLFRVV-----GFKVAVANADDQLKEIADYVTSN 205 (215)
T ss_pred cCceEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHhC-----CCeEEcCCccHHHHHhCCEEcCC
Confidence 5678999999 99999999999999999876 799999999999999998 89999999975 478999985
Q ss_pred -ChhHHHHHH
Q 020285 302 -EPDEVMDFL 310 (328)
Q Consensus 302 -~~~~V~~~L 310 (328)
+.++|.++|
T Consensus 206 ~~~~Gv~~~l 215 (215)
T TIGR01487 206 PYGEGVVEVL 215 (215)
T ss_pred CCCchhhhhC
Confidence 456787764
No 26
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.95 E-value=5.3e-27 Score=212.42 Aligned_cols=217 Identities=15% Similarity=0.155 Sum_probs=144.5
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC---cc-cceEecCCCceeeCCCCC
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK---LA-ELYYAGSHGMDIKGPTKG 143 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---~~-~~~~i~~nG~~i~~~~~~ 143 (328)
+|++||||||++ ++..+++.+ ++++ +.++ .+++|+|||++..+.+++. +. ..++||+||+.|+.+...
T Consensus 1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~ 73 (236)
T TIGR02471 1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL 73 (236)
T ss_pred CeEEeccccccC-----CHHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC
Confidence 589999999998 334577766 7776 5555 5899999999999999863 32 236999999999765321
Q ss_pred ccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecC--cEEEEEcCCCChhhHHHHHHHHHHHHhhCC-Ce
Q 020285 144 LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNK--FCISVHFRCVDEKKWNDLAQKVKEVVNEYP-QL 220 (328)
Q Consensus 144 ~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~--~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~-~l 220 (328)
. ....|... ....|. ..++. ......++..++... ....++|+..++.. .. .+.+.+.+..+. .+
T Consensus 74 ~---~~~~~~~~-~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-~~~~~~~l~~~~~~~ 141 (236)
T TIGR02471 74 Q---PDRFWQKH-IDHDWR--RQAVV----EALADIPGLTLQDDQEQGPFKISYLLDPEGE-PI-LPQIRQRLRQQSQAA 141 (236)
T ss_pred C---CChhHHHH-HhcCCC--HHHHH----HHHhcCCCcEeCChhcCCCeeEEEEECcccc-hH-HHHHHHHHHhccCCE
Confidence 1 00001000 011111 12222 223445666665543 13455665433211 11 223333444332 23
Q ss_pred EE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCC--ccce
Q 020285 221 NW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSAS 297 (328)
Q Consensus 221 ~~-~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~--t~A~ 297 (328)
.+ ..+..++||.|+ ++|||.|+++|++++|++.+ ++++|||+.||++||+.+ |+||+|+|+.++ ..|+
T Consensus 142 ~~~~~~~~~~ei~~~-~~~K~~al~~l~~~~g~~~~---~~i~~GD~~nD~~ml~~~-----~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 142 KVILSCGWFLDVLPL-RASKGLALRYLSYRWGLPLE---QILVAGDSGNDEEMLRGL-----TLGVVVGNHDPELEGLRH 212 (236)
T ss_pred EEEEECCceEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCccHHHHHcCC-----CcEEEEcCCcHHHHHhhc
Confidence 33 455678999999 99999999999999999876 799999999999999987 899999998753 5677
Q ss_pred ----EEeC--ChhHHHHHHHHH
Q 020285 298 ----YSLR--EPDEVMDFLQKL 313 (328)
Q Consensus 298 ----~~l~--~~~~V~~~L~~l 313 (328)
|++. +.+||+++|+++
T Consensus 213 ~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 213 QQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred CCcEEEcCCCChhHHHHHHHhh
Confidence 7875 456899999875
No 27
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.95 E-value=1.4e-26 Score=212.03 Aligned_cols=212 Identities=24% Similarity=0.370 Sum_probs=141.6
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC-c-ccceEecCCCceeeCCCCCcc
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPTKGLK 145 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~-~-~~~~~i~~nG~~i~~~~~~~~ 145 (328)
++|+|+||||++ +...++++++++|++|+++ ++|+|+|||++..+.+++. + ...++|++||+.|+...+...
T Consensus 1 li~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i 75 (256)
T TIGR00099 1 LIFIDLDGTLLN-----DDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEIL 75 (256)
T ss_pred CEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEE
Confidence 589999999998 3457999999999999999 5999999999999888763 2 234799999999998744321
Q ss_pred ccccCceeccCCCcccchHHHHHHHHHHHHhh-----cCCCcEEEecC----------------------------cEEE
Q 020285 146 YNQKSKVVNFQPASEFLPLIDKVYKVLVEKTK-----STPGARVENNK----------------------------FCIS 192 (328)
Q Consensus 146 ~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-----~~~g~~ie~~~----------------------------~~~~ 192 (328)
+.. .+. .+.+.++.+.+..... ...+.++.... +...
T Consensus 76 ~~~-----~i~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T TIGR00099 76 YKK-----PLD-----LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKIL 145 (256)
T ss_pred eec-----CCC-----HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEE
Confidence 110 000 1223444444332100 00111111000 0000
Q ss_pred EEcCCCChhhHHHHHHHHHHHHh--hC-CCeEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcC
Q 020285 193 VHFRCVDEKKWNDLAQKVKEVVN--EY-PQLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTT 268 (328)
Q Consensus 193 ~~~r~~~~~~~~~~~~~v~~~l~--~~-~~l~~-~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~n 268 (328)
.-+ .++.. .+.+.+.+. .+ +.+.+ .++..++||.|+ ++|||.||+++++.+|++.+ ++++|||+.|
T Consensus 146 ~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~-~~~K~~~i~~~~~~~~~~~~---~~~~~GD~~n 215 (256)
T TIGR00099 146 LLF--LDPED----LDLLIEALNKLELEENVSVVSSGPYSIEITAK-GVSKGSALQSLAEALGISLE---DVIAFGDGMN 215 (256)
T ss_pred EEE--CCHHH----HHHHHHHhhhhhhcCCEEEEEecCceEEecCC-CCChHHHHHHHHHHcCCCHH---HEEEeCCcHH
Confidence 000 01111 122223332 12 34554 456789999999 99999999999999999876 8999999999
Q ss_pred CHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--ChhHHHHHH
Q 020285 269 DEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFL 310 (328)
Q Consensus 269 D~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~~~V~~~L 310 (328)
|++||+.+ |++++|+|+++ +..|+|++. +.+||+++|
T Consensus 216 D~~m~~~~-----~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 216 DIEMLEAA-----GYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred hHHHHHhC-----CceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 99999998 89999999864 467999986 456787764
No 28
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.94 E-value=9.7e-25 Score=201.96 Aligned_cols=225 Identities=17% Similarity=0.220 Sum_probs=145.4
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCcc--cceEecCCCceeeCCCCC
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKLA--ELYYAGSHGMDIKGPTKG 143 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~~--~~~~i~~nG~~i~~~~~~ 143 (328)
.++||+|+||||++. ...++++++++|++|++. ++++|||||+...+..++... ..+++++||+.|+.+.+.
T Consensus 4 ~kli~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 4 KLLVFTDLDGTLLDH-----HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred ceEEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 578999999999982 346889999999999998 599999999999988876421 237999999999875432
Q ss_pred ccc------cccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEE----------------------ecCcEEEEEc
Q 020285 144 LKY------NQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVE----------------------NNKFCISVHF 195 (328)
Q Consensus 144 ~~~------~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie----------------------~~~~~~~~~~ 195 (328)
... ....+++...+ .. .+.+.++.+.+..... ..-.... ...+...+-+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T PRK00192 79 FPFQPDGERLKGDYWVIELG-PP-YEELREILDEISDELG-YPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLW 155 (273)
T ss_pred cccCCccccccCCceEEEcC-CC-HHHHHHHHHHHHHHhC-CCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceee
Confidence 100 00001111111 01 1223333333221100 0000000 0000000000
Q ss_pred CCCChhhHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCC-CCCceEEEEeCCcCCHHHHH
Q 020285 196 RCVDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFAD-CSNVFPVYIGDDTTDEDAFK 274 (328)
Q Consensus 196 r~~~~~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~-~~~~~~i~~GD~~nD~~Mf~ 274 (328)
.. +. ...+.+.+.++.. ++.+..+..++||.|. + +||+|+++|++.+|++. + .+++|||+.||++||+
T Consensus 156 ~~-~~----~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~-~Kg~al~~l~~~~~i~~~~---~v~~~GDs~NDi~m~~ 224 (273)
T PRK00192 156 NG-SE----AAKERFEEALKRL-GLKVTRGGRFLHLLGG-G-DKGKAVRWLKELYRRQDGV---ETIALGDSPNDLPMLE 224 (273)
T ss_pred cC-ch----HHHHHHHHHHHHc-CCEEEECCeEEEEeCC-C-CHHHHHHHHHHHHhccCCc---eEEEEcCChhhHHHHH
Confidence 00 11 2223344444443 5666666789999999 9 99999999999999998 7 8999999999999999
Q ss_pred HHHhCCCceEEEEcCCCCC------ccc-eEEe--C--ChhHHHHHHHHHHH
Q 020285 275 ILRKREQGFGILVSKFPKK------TSA-SYSL--R--EPDEVMDFLQKLVR 315 (328)
Q Consensus 275 ~~~~~~~g~~v~v~n~~~~------t~A-~~~l--~--~~~~V~~~L~~l~~ 315 (328)
.+ |++++|+|++.+ ..| ++++ . +.+||++.|++++.
T Consensus 225 ~a-----g~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 225 AA-----DIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred hC-----CeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 98 999999999753 334 4665 3 46799999999863
No 29
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.6e-24 Score=220.75 Aligned_cols=228 Identities=29% Similarity=0.385 Sum_probs=185.5
Q ss_pred HHHHhh-cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc--CCEEEEcCCChhhHHhh-hCcccceEecCC
Q 020285 58 EITEAS-KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDF-VKLAELYYAGSH 133 (328)
Q Consensus 58 ~~~~~~-~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~--~~v~I~SGR~~~~v~~~-~~~~~~~~i~~n 133 (328)
.++..+ ++++++|++|||||+.+.. |..+...|+.|..+ +.|+|+|||++..+... .+.++++++++|
T Consensus 493 ~~i~~y~~s~~rli~ldyd~t~~~~~--------~~~~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEh 564 (732)
T KOG1050|consen 493 HIVSDYKKSKKRLILLDYDLTLIPPR--------SIKAISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEH 564 (732)
T ss_pred HhhhhhhhccceEEEecccccccCCC--------CchHHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeeccc
Confidence 455555 8999999999999988832 12288999999988 47999999999999764 578999999999
Q ss_pred CceeeCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHH
Q 020285 134 GMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEV 213 (328)
Q Consensus 134 G~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~ 213 (328)
|++++.+.+ |. ..-.. ++|.+.+.+++++|++++||+++|.++..+.|||++++++....++..+.+.
T Consensus 565 G~f~r~~~~---w~------~~~~~---~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~ 632 (732)
T KOG1050|consen 565 GYFVRIPGK---WE------TCVLD---LDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRNADPEFGELQAKELLEH 632 (732)
T ss_pred CceeccCCc---ee------eeccc---ccHHHHHHHHHHHHHhcCCCceecccCceEEEeeeccCcchhHHHHHHHHHH
Confidence 999999875 32 11111 4567788888889999999999999999999999999877655555555554
Q ss_pred Hhh-CCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCC------CceEEE
Q 020285 214 VNE-YPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKRE------QGFGIL 286 (328)
Q Consensus 214 l~~-~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~------~g~~v~ 286 (328)
|.. ..++.+..|+..+||+|. |+|||.|+..++..+. ++.++++|+||+.+|++||..+...- .-|+++
T Consensus 633 l~~~~~~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~~~---~~~df~~c~g~d~tDed~~~~~~~~~~~~~~~~~F~~~ 708 (732)
T KOG1050|consen 633 LESKNEPVEVVRGKHIVEVRPQ-GVSKGLAAERILSEMV---KEPDFVLCIGDDRTDEDMFEFISKAKDPEKVEEIFACT 708 (732)
T ss_pred hcccCCCeEEEecCceEEEccc-ccchHHHHHHHHHhcC---CCcceEEEecCCCChHHHHHHHhhccCCcccceEEEEE
Confidence 443 335789999999999999 9999999999999987 34459999999999999999986542 236677
Q ss_pred EcCCCCCccceEEeCChhHHHHHHH
Q 020285 287 VSKFPKKTSASYSLREPDEVMDFLQ 311 (328)
Q Consensus 287 v~n~~~~t~A~~~l~~~~~V~~~L~ 311 (328)
||. +.|.|+|.+.++.+|.+.|+
T Consensus 709 ~g~--~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 709 VGQ--KPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred cCC--CCcccccccCChHHHHhhcc
Confidence 776 78999999999999998775
No 30
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.93 E-value=8.5e-25 Score=195.83 Aligned_cols=195 Identities=16% Similarity=0.189 Sum_probs=124.1
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC---cccceEecCCCceeeCCCCCc
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK---LAELYYAGSHGMDIKGPTKGL 144 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---~~~~~~i~~nG~~i~~~~~~~ 144 (328)
+|++|+||||++. +..+++.++++|++|++. .+|+|+|||+...+..++. +...++||+||+.|+.+....
T Consensus 1 ~i~~DlDGTLL~~-----~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~ 75 (221)
T TIGR02463 1 WVFSDLDGTLLDS-----HSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWR 75 (221)
T ss_pred CEEEeCCCCCcCC-----CCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccc
Confidence 4899999999982 334566699999999998 5999999999999988763 332579999999999864321
Q ss_pred cccccCceeccCCCcccchHHHHHHHHHHHHhhc----CCCc-E----------------EEecCcEEEEEcCCCChhhH
Q 020285 145 KYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKS----TPGA-R----------------VENNKFCISVHFRCVDEKKW 203 (328)
Q Consensus 145 ~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~----~~g~-~----------------ie~~~~~~~~~~r~~~~~~~ 203 (328)
.... -+. ...... .+.+.++++.+...... ..+. . .+.......+... .++
T Consensus 76 ~~~~--~~~-~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 147 (221)
T TIGR02463 76 EEPG--YPR-IILGIS-YGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWR-DSD--- 147 (221)
T ss_pred cCCC--ceE-EecCCC-HHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEec-Cch---
Confidence 0000 000 000001 12233344332221000 0000 0 0000011111110 111
Q ss_pred HHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce
Q 020285 204 NDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF 283 (328)
Q Consensus 204 ~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~ 283 (328)
...+.+.+.++.. ++.+..+..++||.|. +++||.|++++++.+|++.+ ++++|||+.||++||+.+ |+
T Consensus 148 -~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~lgi~~~---~vi~~GD~~NDi~ml~~a-----g~ 216 (221)
T TIGR02463 148 -SRMPRFTALLADL-GLAIVQGNRFSHVLGA-SSSKGKAANWLKATYNQPDV---KTLGLGDGPNDLPLLEVA-----DY 216 (221)
T ss_pred -hHHHHHHHHHHHc-CCeEEecCCeeEEecC-CCCHHHHHHHHHHHhCCCCC---cEEEECCCHHHHHHHHhC-----Cc
Confidence 2223344445443 5666666789999999 99999999999999999987 899999999999999998 89
Q ss_pred EEEE
Q 020285 284 GILV 287 (328)
Q Consensus 284 ~v~v 287 (328)
||+|
T Consensus 217 ~va~ 220 (221)
T TIGR02463 217 AVVI 220 (221)
T ss_pred eEEe
Confidence 9987
No 31
>PLN02382 probable sucrose-phosphatase
Probab=99.92 E-value=2.4e-24 Score=209.79 Aligned_cols=239 Identities=16% Similarity=0.160 Sum_probs=152.9
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHH-HHHHhc-CCEEEEcCCChhhHHhhh---Cc-ccceEecCCCcee
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAV-RQLAKY-FPTAIVTGRCRDKVYDFV---KL-AELYYAGSHGMDI 137 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL-~~L~~~-~~v~I~SGR~~~~v~~~~---~~-~~~~~i~~nG~~i 137 (328)
.+.+.+|++|+||||++.. ++..+++....+| +++.++ ..++++|||+...+.++. ++ .+.++|++||+.|
T Consensus 6 ~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 3467899999999999842 1236776666666 888777 489999999977777654 33 2336888899999
Q ss_pred eCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhC
Q 020285 138 KGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEY 217 (328)
Q Consensus 138 ~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~ 217 (328)
++...-. .+..|..+ ....|.. ..+.+.+..+.........+.+.+.+.+.... .....+.+.+.+.+...
T Consensus 83 ~~~~~~~---~d~~w~~~-l~~~w~~--~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~---~~~~~~~~~l~~~~~~~ 153 (413)
T PLN02382 83 AYGESMV---PDHGWVEY-LNKKWDR--EIVVEETSKFPELKLQPETEQRPHKVSFYVDK---KKAQEVIKELSERLEKR 153 (413)
T ss_pred EeCCCCc---cChhHHHH-HhccCCh--hhHHHHHhcCCCcccCCcccCCCeEEEEEech---HHhHHHHHHHHHHHHhc
Confidence 8644211 11111111 1112221 11222222211111112233444555555432 22233444455545432
Q ss_pred -CCeE-EEecCeEEEEEcCCCCCHHHHHHHHHHHc---CCCCCCCceEEEEeCCcCCHHHHHHHHhCCCc-eEEEEcCCC
Q 020285 218 -PQLN-WRQGRMVMEIRPKIEWDKGKALEFLLECL---GFADCSNVFPVYIGDDTTDEDAFKILRKREQG-FGILVSKFP 291 (328)
Q Consensus 218 -~~l~-~~~g~~~lEI~p~~~~~KG~al~~Ll~~l---g~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g-~~v~v~n~~ 291 (328)
..+. +.++..++||.|+ ++|||.||++|++.+ |++.+ .+++|||+.||++||+.+ | +||+|+|+.
T Consensus 154 g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~~~~~gi~~~---~~iafGDs~NDleMl~~a-----g~~gvam~NA~ 224 (413)
T PLN02382 154 GLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKKLKAEGKAPV---NTLVCGDSGNDAELFSVP-----DVYGVMVSNAQ 224 (413)
T ss_pred CCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHHhhhcCCChh---cEEEEeCCHHHHHHHhcC-----CCCEEEEcCCc
Confidence 1344 3467789999999 999999999999999 88876 899999999999999997 8 799999997
Q ss_pred CC--c--------cceEEeC---ChhHHHHHHHHHHHhhhcCCCc
Q 020285 292 KK--T--------SASYSLR---EPDEVMDFLQKLVRWKRDSADT 323 (328)
Q Consensus 292 ~~--t--------~A~~~l~---~~~~V~~~L~~l~~~~~~~~~~ 323 (328)
++ . .|++++. +++||.+.|+++.-....++++
T Consensus 225 ~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~~~~~~~~ 269 (413)
T PLN02382 225 EELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLGPNVSPRD 269 (413)
T ss_pred HHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCCCCCChhh
Confidence 43 2 2355532 5789999999988655555554
No 32
>PTZ00174 phosphomannomutase; Provisional
Probab=99.92 E-value=6e-24 Score=193.97 Aligned_cols=193 Identities=19% Similarity=0.246 Sum_probs=119.2
Q ss_pred CCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCcc---c-ceEecCCCceeeC
Q 020285 65 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKLA---E-LYYAGSHGMDIKG 139 (328)
Q Consensus 65 ~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~~---~-~~~i~~nG~~i~~ 139 (328)
.+.++|++|+||||++ ++..++++++++|++++++ +.|+|||||++..+.+.++.. . .++|++||+.|+.
T Consensus 3 ~~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 4678999999999998 4567999999999999999 589999999999999888632 2 3679999999996
Q ss_pred CCCCccccccCceeccCCCcccchHHHHHHHHHHHHh-----hcCCCcEEEecCcEEEEEc-CCCC-hhh--------H-
Q 020285 140 PTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKT-----KSTPGARVENNKFCISVHF-RCVD-EKK--------W- 203 (328)
Q Consensus 140 ~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~-----~~~~g~~ie~~~~~~~~~~-r~~~-~~~--------~- 203 (328)
. +...+.. .....-. .+.+.++.+.+.... ....+.+++.......+.+ .... ... .
T Consensus 78 ~-~~~i~~~-----~i~~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (247)
T PTZ00174 78 D-GELFHSQ-----SILKFLG-EEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKE 150 (247)
T ss_pred C-CeEEEEE-----cchhcCC-HHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCc
Confidence 3 3321110 0000000 123445555443221 1112233322211111111 0000 000 0
Q ss_pred HHHHHHHHHHH-hhCCCeE--EEe-cCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC----CcCCHHHHHH
Q 020285 204 NDLAQKVKEVV-NEYPQLN--WRQ-GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD----DTTDEDAFKI 275 (328)
Q Consensus 204 ~~~~~~v~~~l-~~~~~l~--~~~-g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD----~~nD~~Mf~~ 275 (328)
....+.+.+.+ +.++++. ... +..++||.|+ |+|||.||++|++. .+ ++++||| +.||++||+.
T Consensus 151 ~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~-gvsKg~al~~L~~~----~~---eviafGD~~~~~~NDieMl~~ 222 (247)
T PTZ00174 151 HHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPK-GWDKTYCLRHLEND----FK---EIHFFGDKTFEGGNDYEIYND 222 (247)
T ss_pred chHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeC-CCcHHHHHHHHHhh----hh---hEEEEcccCCCCCCcHhhhhc
Confidence 01112222222 3344433 333 3579999999 99999999999999 23 7999999 8999999997
Q ss_pred HH
Q 020285 276 LR 277 (328)
Q Consensus 276 ~~ 277 (328)
++
T Consensus 223 ~~ 224 (247)
T PTZ00174 223 PR 224 (247)
T ss_pred CC
Confidence 63
No 33
>PLN02423 phosphomannomutase
Probab=99.92 E-value=3e-23 Score=189.13 Aligned_cols=211 Identities=21% Similarity=0.307 Sum_probs=135.0
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhCcc---c-ceEecCCCceeeC
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLA---E-LYYAGSHGMDIKG 139 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~~~---~-~~~i~~nG~~i~~ 139 (328)
+..++++|+|+||||++ ++..++++++++|++|+++..|+|+|||+...+.+.++.. . .+++++||+.++.
T Consensus 4 ~~~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~ 78 (245)
T PLN02423 4 RKPGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHK 78 (245)
T ss_pred CccceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEe
Confidence 44566778999999998 3457999999999999987899999999999998777542 1 3789999999985
Q ss_pred CCCCccccccCceeccCCCcccc--hHHHHHHHHHHHHhh-----cCCCcEEEecCcEEEEE--cCCCChh------hH-
Q 020285 140 PTKGLKYNQKSKVVNFQPASEFL--PLIDKVYKVLVEKTK-----STPGARVENNKFCISVH--FRCVDEK------KW- 203 (328)
Q Consensus 140 ~~~~~~~~~~~e~~~~~~~~~~~--~~i~ev~~~l~~~~~-----~~~g~~ie~~~~~~~~~--~r~~~~~------~~- 203 (328)
. +...+. .+-..++ +.+.++.+.+..... ...+.+++.......+. +..+... .+
T Consensus 79 ~-g~~i~~--------~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 79 D-GKLIGT--------QSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYD 149 (245)
T ss_pred C-CEEEEE--------ecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhC
Confidence 3 322111 0111111 334555555433211 12244454332221111 1111111 11
Q ss_pred --H-HHHHHHHHHHhhCCCeEE--E-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC----CcCCHHHH
Q 020285 204 --N-DLAQKVKEVVNEYPQLNW--R-QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD----DTTDEDAF 273 (328)
Q Consensus 204 --~-~~~~~v~~~l~~~~~l~~--~-~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD----~~nD~~Mf 273 (328)
. ...+....+.+.++++.+ . .|..++||.|+ |+|||.||++|+ +.+ ++++||| +.||++||
T Consensus 150 ~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~-gvnKg~al~~L~-----~~~---e~~aFGD~~~~~~ND~eMl 220 (245)
T PLN02423 150 KVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQ-GWDKTYCLQFLE-----DFD---EIHFFGDKTYEGGNDHEIF 220 (245)
T ss_pred ccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeC-CCCHHHHHHHhc-----CcC---eEEEEeccCCCCCCcHHHH
Confidence 1 111222333455665443 2 45589999999 999999999999 444 8999999 79999999
Q ss_pred HHHHhCCCceEEEEcCCCCCccceEEeCChhHHHHHHHHHH
Q 020285 274 KILRKREQGFGILVSKFPKKTSASYSLREPDEVMDFLQKLV 314 (328)
Q Consensus 274 ~~~~~~~~g~~v~v~n~~~~t~A~~~l~~~~~V~~~L~~l~ 314 (328)
+.-. -.++.| .+|+++.+.|+.++
T Consensus 221 ~~~~----~~~~~~-------------~~~~~~~~~~~~~~ 244 (245)
T PLN02423 221 ESER----TIGHTV-------------TSPDDTREQCTALF 244 (245)
T ss_pred hCCC----cceEEe-------------CCHHHHHHHHHHhc
Confidence 9631 235544 58999999888775
No 34
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.89 E-value=1.6e-21 Score=195.84 Aligned_cols=233 Identities=15% Similarity=0.153 Sum_probs=141.3
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCc--ccceEecCCCceeeCC
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKL--AELYYAGSHGMDIKGP 140 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~--~~~~~i~~nG~~i~~~ 140 (328)
..++++||+|+||||++. +..++++++++|++|+++ .+|+|||||+...+..+... ...++|++||+.|+.+
T Consensus 413 ~~~~KLIfsDLDGTLLd~-----d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~ 487 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNP-----LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIP 487 (694)
T ss_pred CceeeEEEEECcCCCcCC-----CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEEC
Confidence 347799999999999983 346778999999999999 59999999999998887642 1247999999999987
Q ss_pred CCCccc--cc---cCceeccCCCcccchHHHHHHHHHHHHhh-------cCCCcEEEecCcEEEEE----cCCCChhh--
Q 020285 141 TKGLKY--NQ---KSKVVNFQPASEFLPLIDKVYKVLVEKTK-------STPGARVENNKFCISVH----FRCVDEKK-- 202 (328)
Q Consensus 141 ~~~~~~--~~---~~e~~~~~~~~~~~~~i~ev~~~l~~~~~-------~~~g~~ie~~~~~~~~~----~r~~~~~~-- 202 (328)
.+.... .. ......++..-. .+.+.++.+.+.+... ...+.++.... ...++ +-..+...
T Consensus 488 ~~~~~~~~~~~~~~~~~iI~~~~l~-~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a~ 565 (694)
T PRK14502 488 KDYFRLPFAYDRVAGNYLVIELGMA-YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQAE 565 (694)
T ss_pred CCcccccccccccCCCeEEEEcCCC-HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHHH
Confidence 641100 00 001111111111 1223444443332110 00011111100 00000 00000000
Q ss_pred ------------H---HHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEE--eC
Q 020285 203 ------------W---NDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYI--GD 265 (328)
Q Consensus 203 ------------~---~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~--GD 265 (328)
| .+..+.+.+.++.. ++.+..|..++||. . ++|||.||++|++.+|++.+ .+++| ||
T Consensus 566 ~a~~Re~seKIl~~gd~e~Leel~~~L~~~-~l~v~~g~rfleI~-~-gvdKG~AL~~L~e~~gI~~~---eViafalGD 639 (694)
T PRK14502 566 LAKQREYSETVHIEGDKRSTNIVLNHIQQS-GLEYSFGGRFYEVT-G-GNDKGKAIKILNELFRLNFG---NIHTFGLGD 639 (694)
T ss_pred HHhhccCceeEEEcCCHHHHHHHHHHHHHc-CcEEEECCEEEEeC-C-CCCHHHHHHHHHHHhCCCcc---ceEEEEcCC
Confidence 0 12233444444443 67777799999999 6 89999999999999998875 56666 99
Q ss_pred CcCCHHHHHHHHhCCCceEEEEcCCCCCc--c--ce-EEeC--ChhHHHHHHHHHH
Q 020285 266 DTTDEDAFKILRKREQGFGILVSKFPKKT--S--AS-YSLR--EPDEVMDFLQKLV 314 (328)
Q Consensus 266 ~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t--~--A~-~~l~--~~~~V~~~L~~l~ 314 (328)
+.||++||+++ |+||+|++...+- . -. ..++ .|.|=.+.+++++
T Consensus 640 s~NDisMLe~A-----g~gVAM~~~~~~~~~l~~~~~~~~~~~GP~GW~eai~~~L 690 (694)
T PRK14502 640 SENDYSMLETV-----DSPILVQRPGNKWHKMRLRNPSYVKGVGPEGFSRAVTDII 690 (694)
T ss_pred cHhhHHHHHhC-----CceEEEcCCCCCCCccCCCCceecCCCCcHHHHHHHHHHH
Confidence 99999999998 8999998754321 1 11 1222 5666666665555
No 35
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.89 E-value=2.2e-23 Score=190.19 Aligned_cols=223 Identities=21% Similarity=0.260 Sum_probs=132.1
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC---c-ccceEecCCCceeeCC
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK---L-AELYYAGSHGMDIKGP 140 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~---~-~~~~~i~~nG~~i~~~ 140 (328)
.+++|++|+||||++ .+.....++.+.++...+. ..++++|||+...+.+.+. + .+.++||++|+.|+..
T Consensus 1 ~~~ll~sDlD~Tl~~-----~~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~ 75 (247)
T PF05116_consen 1 PPRLLASDLDGTLID-----GDDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYG 75 (247)
T ss_dssp -SEEEEEETBTTTBH-----CHHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEES
T ss_pred CCEEEEEECCCCCcC-----CCHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEc
Confidence 368999999999992 1122334444545511122 4799999999999998763 3 2457999999999983
Q ss_pred CCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCCCe
Q 020285 141 TKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYPQL 220 (328)
Q Consensus 141 ~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~~l 220 (328)
.. +..+.+|.. .....|.. +.+.+.+..+..-.+....+.+.+++++.++..... .+.+.+++.++.. ++
T Consensus 76 ~~---~~~d~~w~~-~i~~~w~~--~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~~l~~~-~l 145 (247)
T PF05116_consen 76 EN---WQPDEEWQA-HIDERWDR--ERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRARLRQR-GL 145 (247)
T ss_dssp ST---TEE-HHHHH-HHHTT--H--HHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHHHHHCC-TC
T ss_pred CC---CcChHHHHH-HHHhcCCh--HHHHHHHHHhhCcccCCccccCCeeEEEEEecccch---hHHHHHHHHHHHc-CC
Confidence 31 111111210 01122322 334444433221111112233456677666543332 3345667777654 43
Q ss_pred --E-EEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCC----
Q 020285 221 --N-WRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK---- 293 (328)
Q Consensus 221 --~-~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~---- 293 (328)
. +.++..+++|.|. +++||.||++|+++++++.+ .++++|||.||++||... ..||+|+|+..+
T Consensus 146 ~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~~~~~~~---~vl~aGDSgND~~mL~~~-----~~~vvV~Na~~e~~~~ 216 (247)
T PF05116_consen 146 RVNVIYSNGRDLDILPK-GASKGAALRYLMERWGIPPE---QVLVAGDSGNDLEMLEGG-----DHGVVVGNAQPELLSW 216 (247)
T ss_dssp EEEEEECTCCEEEEEET-T-SHHHHHHHHHHHHT--GG---GEEEEESSGGGHHHHCCS-----SEEEE-TTS-HHHHHH
T ss_pred CeeEEEccceeEEEccC-CCCHHHHHHHHHHHhCCCHH---HEEEEeCCCCcHHHHcCc-----CCEEEEcCCCHHHHHH
Confidence 3 3456788999999 99999999999999999876 799999999999999654 689999998754
Q ss_pred ----cc--ce-EEeC--ChhHHHHHHHH
Q 020285 294 ----TS--AS-YSLR--EPDEVMDFLQK 312 (328)
Q Consensus 294 ----t~--A~-~~l~--~~~~V~~~L~~ 312 (328)
.. .+ |... ...||++-|++
T Consensus 217 ~~~~~~~~~~iy~a~~~~a~GIlegl~~ 244 (247)
T PF05116_consen 217 LLEKLRQQERIYFAQGPYAAGILEGLQH 244 (247)
T ss_dssp HHHCC-TTE--EE-SS-THHHHHHHHHH
T ss_pred HHHhcccCCceEecCCCCcHHHHHHHHH
Confidence 11 11 4444 34677777765
No 36
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.87 E-value=3.5e-21 Score=176.52 Aligned_cols=230 Identities=14% Similarity=0.161 Sum_probs=141.8
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh---CcccceEecCCCceeeCCCCC
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPTKG 143 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~---~~~~~~~i~~nG~~i~~~~~~ 143 (328)
++||+|+||||+++ ...+++.++++|++|+++ ++|+++|||++..+..+. ++. .++|++||+.|+.|.+.
T Consensus 2 KLIftDLDGTLLd~-----~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~-~p~I~eNGA~I~~p~~~ 75 (302)
T PRK12702 2 RLVLSSLDGSLLDL-----EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE-HPFICEDGSAIYVPEHY 75 (302)
T ss_pred cEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC-CeEEEeCCcEEEEcccc
Confidence 68999999999984 346888999999999999 599999999999988876 333 38999999999988542
Q ss_pred ccc--------cccCceec--cCCCcccchHHHHHHHHHHH----H-------hhcCCCcEEE------ecCcEEEEEcC
Q 020285 144 LKY--------NQKSKVVN--FQPASEFLPLIDKVYKVLVE----K-------TKSTPGARVE------NNKFCISVHFR 196 (328)
Q Consensus 144 ~~~--------~~~~e~~~--~~~~~~~~~~i~ev~~~l~~----~-------~~~~~g~~ie------~~~~~~~~~~r 196 (328)
... ....-++. -.+..++...++++...+.. | .....|.-.+ .++|+-.+.|.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w~ 155 (302)
T PRK12702 76 FPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSYS 155 (302)
T ss_pred ccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEec
Confidence 100 00000000 00111111222222222110 0 0011121111 23344444444
Q ss_pred CCChhhHHHHHHHHHHHHhhCCCeEEEecCeEEEEEc---------------------CCCCCHHHHHHHHHHHcCCCCC
Q 020285 197 CVDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRP---------------------KIEWDKGKALEFLLECLGFADC 255 (328)
Q Consensus 197 ~~~~~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p---------------------~~~~~KG~al~~Ll~~lg~~~~ 255 (328)
.-+. .+ .+.+++. ++.++.|..++.+.. . +.+||.|+++|.+.+.-..
T Consensus 156 ~~~~----~~----~~~~~~~-g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~-~~dKg~A~~~L~~~y~~~~- 224 (302)
T PRK12702 156 GDPA----RL----REAFAQQ-EANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPN-SLPGEQAVQLLLDCYQRHL- 224 (302)
T ss_pred CCHH----HH----HHHHHHc-CCeEEecCceEEecccccccccccccccccccccccC-CCCHHHHHHHHHHHHHhcc-
Confidence 3221 11 4444444 788888877777764 3 6799999999999986543
Q ss_pred CCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCC-------------ccceEEe---CChhHHHHHHHHHHHhhhc
Q 020285 256 SNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK-------------TSASYSL---REPDEVMDFLQKLVRWKRD 319 (328)
Q Consensus 256 ~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~-------------t~A~~~l---~~~~~V~~~L~~l~~~~~~ 319 (328)
....+|++|||.||++||+++ .++|+|.+...+ .....+. ..|+|=.+.+..++..-.+
T Consensus 225 ~~~~tiaLGDspND~~mLe~~-----D~~vvi~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~GP~GW~e~v~~~l~~~~~ 299 (302)
T PRK12702 225 GPIKALGIGCSPPDLAFLRWS-----EQKVVLPSPIADSLWKEALRLGGPEVQPQWQLAQLPGPEGWNEVVLMWLEETDH 299 (302)
T ss_pred CCceEEEecCChhhHHHHHhC-----CeeEEecCCCCCCcccccccccCcccCccceecCCCCcHHHHHHHHHHHHhhcc
Confidence 334899999999999999998 689999654211 1122222 3677766777766655443
No 37
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.87 E-value=7e-22 Score=177.96 Aligned_cols=197 Identities=21% Similarity=0.325 Sum_probs=118.5
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCcc--cceEecCCCceeeCCCCCcc
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKLA--ELYYAGSHGMDIKGPTKGLK 145 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~~--~~~~i~~nG~~i~~~~~~~~ 145 (328)
++|+|+||||+.. ..++++++++|++|++. .+++++|||+...+..++... ..++|++||+.|+.+.....
T Consensus 1 li~~DlDGTLl~~------~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~ 74 (225)
T TIGR02461 1 VIFTDLDGTLLPP------GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFP 74 (225)
T ss_pred CEEEeCCCCCcCC------CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCcccc
Confidence 5899999999982 23567899999999998 599999999999988876321 23799999999998753100
Q ss_pred cc-----c-cCceeccCCCcccchHHHHHHHHHHH-Hh-hcCCCcEEE-----------------ecCcEEEEEcCCCCh
Q 020285 146 YN-----Q-KSKVVNFQPASEFLPLIDKVYKVLVE-KT-KSTPGARVE-----------------NNKFCISVHFRCVDE 200 (328)
Q Consensus 146 ~~-----~-~~e~~~~~~~~~~~~~i~ev~~~l~~-~~-~~~~g~~ie-----------------~~~~~~~~~~r~~~~ 200 (328)
+. . ..+ ..+..... .+.+.++.+.+.+ +. ....+.... ...+.-.+ +.. ++
T Consensus 75 ~~~~~~~~~~~~-~i~~~~l~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~-~~~-~~ 150 (225)
T TIGR02461 75 FPVGAGREVGNY-EVIELGKP-VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETI-FLW-SR 150 (225)
T ss_pred ccccccccCCCe-EEEEcCCC-HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcc-cCC-CH
Confidence 00 0 001 11111000 1223344443332 00 000000000 00000000 000 11
Q ss_pred hhHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCC
Q 020285 201 KKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKRE 280 (328)
Q Consensus 201 ~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~ 280 (328)
+.+..+. +.++. .++.+.++..++++ +. ++|||.|++++++.+++..+ .+.+++|||+.||++||+.+
T Consensus 151 e~~~~~~----~~~~~-~~~~~~~s~~~~~i-~~-~~sK~~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~a---- 218 (225)
T TIGR02461 151 EGWEAIL----VTARA-RGLKYTHGGRFYTV-HG-GSDKGKAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVV---- 218 (225)
T ss_pred HHHHHHH----HHHHH-cCCcEEECCEEEEE-CC-CCCHHHHHHHHHHHhccccC-cccEEEEcCCHHHHHHHHhC----
Confidence 1122222 22222 35777777777775 77 99999999999999977421 12799999999999999998
Q ss_pred CceEEEEc
Q 020285 281 QGFGILVS 288 (328)
Q Consensus 281 ~g~~v~v~ 288 (328)
|+||+||
T Consensus 219 -g~~v~v~ 225 (225)
T TIGR02461 219 -DLAFLVG 225 (225)
T ss_pred -CCcEecC
Confidence 8999885
No 38
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.2e-23 Score=214.49 Aligned_cols=306 Identities=32% Similarity=0.342 Sum_probs=236.3
Q ss_pred CCCcchhHHHHHhcCCCCCCCCCc-----c--chHHHHHhh-hhCCCCcchHHHHHHhhcCCCEEEEEecCCcccCCCCC
Q 020285 13 ARPNNCWVESIRASSPTHMKSITP-----S--LLEEKRAWI-IRHPSALDMFHEITEASKGKQIVMFLDYDGTLSPIVEN 84 (328)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~w~-~~~~~al~~~~~~~~~~~~k~~li~~D~DGTL~~~~~~ 84 (328)
....+.|+++|+ ++|++-+...+ + .....++|+ -.+|+++.+++.+......+++|.++|+||||.++..+
T Consensus 128 ~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d 206 (732)
T KOG1050|consen 128 QAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDD 206 (732)
T ss_pred HHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCcccccccc
Confidence 345688999999 99998664433 1 123479999 78999999999999999999999999999999999999
Q ss_pred CCcccCChHHHHHHHHHHhcCCEEEEcCCChhh----------HHhhhCcccceEecCCCceeeCCCCCccccccCc---
Q 020285 85 PDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDK----------VYDFVKLAELYYAGSHGMDIKGPTKGLKYNQKSK--- 151 (328)
Q Consensus 85 p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~----------v~~~~~~~~~~~i~~nG~~i~~~~~~~~~~~~~e--- 151 (328)
+++++++-.++.+..+.+++++.+++|||++.. +++++...+++++++||++|..+.+......+..
T Consensus 207 ~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d 286 (732)
T KOG1050|consen 207 YARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLD 286 (732)
T ss_pred HHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccc
Confidence 999999999999999999999999999999887 7888888899999999999998863211000000
Q ss_pred ---------eeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCCCeEE
Q 020285 152 ---------VVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYPQLNW 222 (328)
Q Consensus 152 ---------~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~~l~~ 222 (328)
....++..++.++++++...........++..+++.++|+..|+++++...+....+.+.-+...+|..+.
T Consensus 287 ~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l 366 (732)
T KOG1050|consen 287 SIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLEL 366 (732)
T ss_pred cccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHH
Confidence 00011111122222222111111123445555667788999999999887776555666666677777788
Q ss_pred EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCC--CCCceEEEEeCCcCCHHHHHHHHhC-CCceEEEEcCCCCCccceEE
Q 020285 223 RQGRMVMEIRPKIEWDKGKALEFLLECLGFAD--CSNVFPVYIGDDTTDEDAFKILRKR-EQGFGILVSKFPKKTSASYS 299 (328)
Q Consensus 223 ~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~--~~~~~~i~~GD~~nD~~Mf~~~~~~-~~g~~v~v~n~~~~t~A~~~ 299 (328)
+.+..+.|++|.+.|.||.++..+...++... ..++...++||+.+|++.+..++.. .++++++|+.+...+.+.+.
T Consensus 367 ~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~ 446 (732)
T KOG1050|consen 367 LALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERE 446 (732)
T ss_pred hhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHh
Confidence 88999999999999999999999999988877 7778889999999999999998776 45788999988888888888
Q ss_pred eCChhHHHH-HHHHHHHhhhc
Q 020285 300 LREPDEVMD-FLQKLVRWKRD 319 (328)
Q Consensus 300 l~~~~~V~~-~L~~l~~~~~~ 319 (328)
++++..+.. +...+..|.+.
T Consensus 447 ~r~~~~~~~v~~~~~~~W~~~ 467 (732)
T KOG1050|consen 447 LREPKHYKYVSTHDVVYWAKS 467 (732)
T ss_pred hcchhhhhhhcchhHHHHHHH
Confidence 888887777 67777777654
No 39
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.68 E-value=1.7e-15 Score=131.71 Aligned_cols=204 Identities=17% Similarity=0.273 Sum_probs=124.5
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhh---hCcccceEecCCCceeeCCC
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDF---VKLAELYYAGSHGMDIKGPT 141 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~---~~~~~~~~i~~nG~~i~~~~ 141 (328)
...+||+|+||||+++.-+++ .....+.+|.+. ++|++||..++..+..+ +++++.++|++||+.|+.|.
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~------pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQ------PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred cceEEEEcccCcccCCCCCCC------ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 347899999999999765543 345578888888 59999999999887765 57777899999999999987
Q ss_pred CCccccc-cCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEE-----------------------ecCcEEEEEcCC
Q 020285 142 KGLKYNQ-KSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVE-----------------------NNKFCISVHFRC 197 (328)
Q Consensus 142 ~~~~~~~-~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie-----------------------~~~~~~~~~~r~ 197 (328)
+-.-+.. ..+..-.. ..+.--.++++.+.+.. .+..-|...- .++++.++-.|.
T Consensus 80 ~~~~~~~~~r~~~g~~-~~elg~~l~~ire~l~k-Lee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs 157 (274)
T COG3769 80 GWFPFDGKPREISGIS-HIELGKVLEKIREKLDK-LEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRS 157 (274)
T ss_pred cccccCCCCceecceE-eeehhhhHHHHHHHHHH-HHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecc
Confidence 5311100 00000000 00111123333333311 1111121100 011122222222
Q ss_pred CChhhHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHH
Q 020285 198 VDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILR 277 (328)
Q Consensus 198 ~~~~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~ 277 (328)
.+. ...+....|.+ -+++++.|..+..+... ...||.|+.++++.+..-..- ..++..||+.||.+||+++
T Consensus 158 ~d~-----~~~~~~~~L~e-~glt~v~garf~~v~~a-s~gKg~Aa~~ll~~y~rl~~~-r~t~~~GDg~nD~Pl~ev~- 228 (274)
T COG3769 158 SDE-----RMAQFTARLNE-RGLTFVHGARFWHVLDA-SAGKGQAANWLLETYRRLGGA-RTTLGLGDGPNDAPLLEVM- 228 (274)
T ss_pred cch-----HHHHHHHHHHh-cCceEEeccceEEEecc-ccCccHHHHHHHHHHHhcCce-eEEEecCCCCCcccHHHhh-
Confidence 111 11222333433 37899998888888877 667999999999876433321 1489999999999999998
Q ss_pred hCCCceEEEEcCC
Q 020285 278 KREQGFGILVSKF 290 (328)
Q Consensus 278 ~~~~g~~v~v~n~ 290 (328)
.+++.|++-
T Consensus 229 ----d~AfiV~~l 237 (274)
T COG3769 229 ----DYAFIVKGL 237 (274)
T ss_pred ----hhheeeccc
Confidence 689999854
No 40
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.50 E-value=1.2e-12 Score=112.35 Aligned_cols=193 Identities=22% Similarity=0.298 Sum_probs=129.5
Q ss_pred hcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhCcc----cceEecCCCceee
Q 020285 63 SKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLA----ELYYAGSHGMDIK 138 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~~~----~~~~i~~nG~~i~ 138 (328)
++..+.|+.||.||||++ .+..++|++.+.|++|++...+.++-|....++.+.+|.+ -.|...+||..-+
T Consensus 7 ~r~~~~l~lfdvdgtLt~-----~r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~y 81 (252)
T KOG3189|consen 7 ARDEETLCLFDVDGTLTP-----PRQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAY 81 (252)
T ss_pred hcCCceEEEEecCCcccc-----ccccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEe
Confidence 355678999999999999 4678999999999999999999999999999999988632 2378899999877
Q ss_pred CCCCCccccccCceeccCCCcccc--hHHHHHHHHHHHHhh-----cCCCcEEEecCcEEEEE--cCCCChhhH------
Q 020285 139 GPTKGLKYNQKSKVVNFQPASEFL--PLIDKVYKVLVEKTK-----STPGARVENNKFCISVH--FRCVDEKKW------ 203 (328)
Q Consensus 139 ~~~~~~~~~~~~e~~~~~~~~~~~--~~i~ev~~~l~~~~~-----~~~g~~ie~~~~~~~~~--~r~~~~~~~------ 203 (328)
..+... - .|.-..++ +.++++.+....|.. ...|.++|-+.-.+.+. -|++..++.
T Consensus 82 k~gk~~-~--------~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~ 152 (252)
T KOG3189|consen 82 KGGKLL-S--------KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEEL 152 (252)
T ss_pred eCCcch-h--------HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHh
Confidence 654321 1 11111111 122333333333332 23588999776555554 355543321
Q ss_pred ---HHHHHHHHHHH-hhCC--CeEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC----CcCCHHH
Q 020285 204 ---NDLAQKVKEVV-NEYP--QLNWR-QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD----DTTDEDA 272 (328)
Q Consensus 204 ---~~~~~~v~~~l-~~~~--~l~~~-~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD----~~nD~~M 272 (328)
..+++.+-+.| ++|+ ++.+. .|...+||-|. ||+|-+.|++|-.. |++ .+.+||| +.||.+.
T Consensus 153 Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~-GWDKtyCLqhle~d-gf~-----~IhFFGDkT~~GGNDyEI 225 (252)
T KOG3189|consen 153 DKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPK-GWDKTYCLQHLEKD-GFD-----TIHFFGDKTMPGGNDYEI 225 (252)
T ss_pred hhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCC-CcchhHHHHHhhhc-CCc-----eEEEeccccCCCCCccee
Confidence 12333332222 3444 56654 56789999999 99999999998765 565 6999999 4588887
Q ss_pred HHHH
Q 020285 273 FKIL 276 (328)
Q Consensus 273 f~~~ 276 (328)
|.--
T Consensus 226 f~dp 229 (252)
T KOG3189|consen 226 FADP 229 (252)
T ss_pred eeCC
Confidence 7653
No 41
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=99.35 E-value=1.6e-11 Score=108.12 Aligned_cols=189 Identities=22% Similarity=0.350 Sum_probs=122.0
Q ss_pred HHHHHHHHHhcCCEEEEcCCChhhHHhhhC-c---c-cceEecCCCceeeCCCCCccccccCceeccCCCcccc--hHHH
Q 020285 94 MRRAVRQLAKYFPTAIVTGRCRDKVYDFVK-L---A-ELYYAGSHGMDIKGPTKGLKYNQKSKVVNFQPASEFL--PLID 166 (328)
Q Consensus 94 ~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~-~---~-~~~~i~~nG~~i~~~~~~~~~~~~~e~~~~~~~~~~~--~~i~ 166 (328)
|.+.|++|.+...|+|+||-.+.++++.+. . . -.|+..+||...+..+... +.+ .-.+++ +..+
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~-~~~--------~~~~~lgee~~~ 71 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELI-WSQ--------SIAEFLGEEKLQ 71 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEE-EE----------HHHHHHHHHHH
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCch-hhH--------hHHHHcCHHHHH
Confidence 678999999999999999999999999883 2 1 2379999999988765331 211 101111 1123
Q ss_pred HHHHHHHHHhh-----cCCCcEEEecCcEEEEEc--CCCChhh---HH------HHHHHHHHHH-hhCCC--eEEE-ecC
Q 020285 167 KVYKVLVEKTK-----STPGARVENNKFCISVHF--RCVDEKK---WN------DLAQKVKEVV-NEYPQ--LNWR-QGR 226 (328)
Q Consensus 167 ev~~~l~~~~~-----~~~g~~ie~~~~~~~~~~--r~~~~~~---~~------~~~~~v~~~l-~~~~~--l~~~-~g~ 226 (328)
++.+.+..+.. ...|.+||.+...+.+.. |+++.++ |. .+++.+.+.| +++|+ +++. .|.
T Consensus 72 ~~in~~l~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGq 151 (220)
T PF03332_consen 72 KLINFCLRYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQ 151 (220)
T ss_dssp HHHHHHHHHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETT
T ss_pred HHHHHHHHHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCc
Confidence 33333333222 235889999998888764 5555331 21 2333333333 57885 6654 578
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC----CcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCC
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD----DTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLRE 302 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD----~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~~ 302 (328)
..+||.|+ ||||..+|++|.+.. + +.+++||| +-||.|+|...+ -.|+.| .+
T Consensus 152 iSiDvfp~-GwDKty~Lr~l~~~~-~-----~~I~FfGDkt~pGGNDyei~~~~r----t~g~~V-------------~~ 207 (220)
T PF03332_consen 152 ISIDVFPK-GWDKTYCLRHLEDEG-F-----DEIHFFGDKTFPGGNDYEIFEDPR----TIGHTV-------------TS 207 (220)
T ss_dssp TEEEEEET-T-SGGGGGGGTTTTT-------SEEEEEESS-STTSTTHHHHHSTT----SEEEE--------------SS
T ss_pred eEEccccC-CccHHHHHHHHHhcc-c-----ceEEEEehhccCCCCCceeeecCC----ccEEEe-------------CC
Confidence 99999999 999999999987643 2 38999999 469999997642 235444 68
Q ss_pred hhHHHHHHHHHHH
Q 020285 303 PDEVMDFLQKLVR 315 (328)
Q Consensus 303 ~~~V~~~L~~l~~ 315 (328)
|++.++.|+.|+.
T Consensus 208 p~DT~~~l~~l~~ 220 (220)
T PF03332_consen 208 PEDTIKQLKELFF 220 (220)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998863
No 42
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.32 E-value=2.3e-11 Score=128.59 Aligned_cols=189 Identities=12% Similarity=0.149 Sum_probs=110.1
Q ss_pred CCEEEE--EecCCcccCCCCCCCcccCChHHHHHHHHHHh--c---CCEEEEcCCChhhHHhhh---Ccc---cceEecC
Q 020285 66 KQIVMF--LDYDGTLSPIVENPDRAFMSGKMRRAVRQLAK--Y---FPTAIVTGRCRDKVYDFV---KLA---ELYYAGS 132 (328)
Q Consensus 66 k~~li~--~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~--~---~~v~I~SGR~~~~v~~~~---~~~---~~~~i~~ 132 (328)
++++++ +|+|.| .. ..+.+++.++.+.+ . .-|+++|||+...+.+++ ++| +..+||+
T Consensus 769 ~~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~ 838 (1050)
T TIGR02468 769 RKRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICN 838 (1050)
T ss_pred cceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Confidence 456666 999999 22 22233344444432 1 368999999999999976 344 3579999
Q ss_pred CCceeeCCCCC----ccccccCceeccCCCcccchHHHHHHHHHHHHhhc--------CCCcEEE----ecCcEEEEEcC
Q 020285 133 HGMDIKGPTKG----LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKS--------TPGARVE----NNKFCISVHFR 196 (328)
Q Consensus 133 nG~~i~~~~~~----~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~--------~~g~~ie----~~~~~~~~~~r 196 (328)
-|++||++... ..+..+..|.. .....|.. +.+.+.+...... .++...+ ...+|+++...
T Consensus 839 vGTeIyy~~~~~~~~~~~~~D~~w~~-hI~~rW~g--e~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~ 915 (1050)
T TIGR02468 839 SGSELYYPSLNGSEEGKLVADQDYHS-HIEYRWGG--EGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVK 915 (1050)
T ss_pred CCcceeccCcCCCCCCCceECHHHHH-HHHccCCc--HHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEec
Confidence 99999997311 00111101100 01223422 2233333322221 1334443 33477776533
Q ss_pred CCChhhHHHHHHHHHHHHhhCC-CeE--EEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceE-EEEeCCcC-CHH
Q 020285 197 CVDEKKWNDLAQKVKEVVNEYP-QLN--WRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFP-VYIGDDTT-DED 271 (328)
Q Consensus 197 ~~~~~~~~~~~~~v~~~l~~~~-~l~--~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~-i~~GD~~n-D~~ 271 (328)
+.+. ....+.+++.|.... ..+ ..++..+|+|.|. .+|||.||++|..+||++.+ .+ +++||+.| |.+
T Consensus 916 d~~~---~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~rwgi~l~---~v~VfaGdSGntD~e 988 (1050)
T TIGR02468 916 DPSK---VPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVRWGIELA---NMAVFVGESGDTDYE 988 (1050)
T ss_pred Cccc---CccHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHHcCCChH---HeEEEeccCCCCCHH
Confidence 2221 112244455554331 222 3345689999999 99999999999999999987 56 66999999 955
Q ss_pred -HHH
Q 020285 272 -AFK 274 (328)
Q Consensus 272 -Mf~ 274 (328)
|+.
T Consensus 989 ~Ll~ 992 (1050)
T TIGR02468 989 GLLG 992 (1050)
T ss_pred HHhC
Confidence 543
No 43
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.25 E-value=2.5e-11 Score=103.01 Aligned_cols=72 Identities=26% Similarity=0.278 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCChh---HHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLREPD---EVMDFLQK 312 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~~~~---~V~~~L~~ 312 (328)
+|..++..+++.+|++++ .++++||+.||.+|++.+ |++++|.++.. +..|+|++..+. ++.+++++
T Consensus 76 ~k~~~~~~~~~~~~~~~~---~~~~vGDs~~D~~~~~~a-----g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~ 147 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPE---NVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCEL 147 (154)
T ss_pred chHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 488899999999999876 799999999999999998 88999998864 467899987553 39999999
Q ss_pred HHHhh
Q 020285 313 LVRWK 317 (328)
Q Consensus 313 l~~~~ 317 (328)
+++..
T Consensus 148 ~~~~~ 152 (154)
T TIGR01670 148 LLLAQ 152 (154)
T ss_pred HHHhh
Confidence 98764
No 44
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.16 E-value=7.2e-11 Score=103.01 Aligned_cols=56 Identities=32% Similarity=0.351 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR 301 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~ 301 (328)
+|..+++.+++.+|++++ ++++|||+.||++|++.+ |++++|+++.. +..|+|++.
T Consensus 96 ~k~~~l~~~~~~~gl~~~---ev~~VGDs~~D~~~a~~a-----G~~~~v~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 96 NKLIAFSDLLEKLAIAPE---QVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLLPRADYVTR 153 (183)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCChhHHHHHhCCEEec
Confidence 467889999999999876 899999999999999998 89999887643 356899986
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.03 E-value=1.8e-10 Score=108.99 Aligned_cols=66 Identities=24% Similarity=0.237 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--ChhHHHHHHH
Q 020285 237 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFLQ 311 (328)
Q Consensus 237 ~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~~~V~~~L~ 311 (328)
-.|+.+++.+++.+|++.+ ++++|||+.||++|++.+ |+||++ |+.+ +..|+++++ +-++|+.+|-
T Consensus 247 k~K~~~L~~la~~lgi~~~---qtIaVGDg~NDl~m~~~A-----GlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLA---QTVAIGDGANDLPMIKAA-----GLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChh---hEEEEECCHHHHHHHHHC-----CCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 4799999999999999887 899999999999999998 999999 7754 478999997 4457776654
No 46
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.94 E-value=2.7e-09 Score=86.21 Aligned_cols=55 Identities=20% Similarity=0.353 Sum_probs=43.8
Q ss_pred EEEEecCCcccCCCCC---CCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 69 VMFLDYDGTLSPIVEN---PDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 69 li~~D~DGTL~~~~~~---p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
+++||+||||++.... .....+.+.+.+.|++|+++ .+++|+|||....+..++.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHH
Confidence 4789999999985321 01236889999999999998 5999999999888887664
No 47
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.69 E-value=3.2e-08 Score=84.22 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=54.0
Q ss_pred EEEEecCCcccCCCCC------CCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHH---hhh--------CcccceEe
Q 020285 69 VMFLDYDGTLSPIVEN------PDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY---DFV--------KLAELYYA 130 (328)
Q Consensus 69 li~~D~DGTL~~~~~~------p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~---~~~--------~~~~~~~i 130 (328)
++++|+||||+....- .....+++.+.++++++++++ +++++|||+...+. +++ ++|..+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 4899999999984200 001478999999999999994 99999999988774 433 14445788
Q ss_pred cCCCceeeCC
Q 020285 131 GSHGMDIKGP 140 (328)
Q Consensus 131 ~~nG~~i~~~ 140 (328)
++||+.+...
T Consensus 81 ~~~g~~~~~~ 90 (157)
T smart00775 81 LSPDRLFAAL 90 (157)
T ss_pred EcCCcchhhh
Confidence 8999887643
No 48
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.47 E-value=1.2e-07 Score=81.56 Aligned_cols=71 Identities=23% Similarity=0.353 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCCh---hHHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLREP---DEVMDFLQK 312 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~~~---~~V~~~L~~ 312 (328)
.|-..++.+++.++++++ ++++|||+.||++|++.+ |++++|+|+.. +..|+|++..+ ..+.++++.
T Consensus 82 pkp~~~~~~~~~l~~~~~---ev~~iGD~~nDi~~~~~a-----g~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~ 153 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDA---EVCYVGDDLVDLSMMKRV-----GLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAEL 153 (169)
T ss_pred CCHHHHHHHHHHcCcCHH---HEEEECCCHHHHHHHHHC-----CCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHH
Confidence 466799999999999876 899999999999999998 99999999974 57899998533 246777777
Q ss_pred HHHh
Q 020285 313 LVRW 316 (328)
Q Consensus 313 l~~~ 316 (328)
++..
T Consensus 154 il~~ 157 (169)
T TIGR02726 154 ILKA 157 (169)
T ss_pred HHHh
Confidence 7753
No 49
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.40 E-value=1.2e-07 Score=79.08 Aligned_cols=73 Identities=23% Similarity=0.251 Sum_probs=62.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeC---ChhHHHHHH
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSASYSLR---EPDEVMDFL 310 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~--t~A~~~l~---~~~~V~~~L 310 (328)
.-+|-.+.+.|++.+++..+ ++.|+||+.||+++|+.+ |++++|.++++. ..|.|+++ ....|.+++
T Consensus 81 ~~dK~~a~~~L~~~~~l~~e---~~ayiGDD~~Dlpvm~~v-----Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~ 152 (170)
T COG1778 81 ISDKLAAFEELLKKLNLDPE---EVAYVGDDLVDLPVMEKV-----GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVC 152 (170)
T ss_pred hHhHHHHHHHHHHHhCCCHH---HhhhhcCccccHHHHHHc-----CCcccccccCHHHHHhhHhhhhccCcchHHHHHH
Confidence 34899999999999999987 899999999999999998 999999999864 67999986 345677777
Q ss_pred HHHHHh
Q 020285 311 QKLVRW 316 (328)
Q Consensus 311 ~~l~~~ 316 (328)
+-++..
T Consensus 153 dlil~a 158 (170)
T COG1778 153 DLILQA 158 (170)
T ss_pred HHHHHc
Confidence 766643
No 50
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.36 E-value=6.9e-06 Score=75.11 Aligned_cols=65 Identities=18% Similarity=0.177 Sum_probs=48.1
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcC---CChhhHHhhh---Cc--ccceEecCCCceee
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTG---RCRDKVYDFV---KL--AELYYAGSHGMDIK 138 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SG---R~~~~v~~~~---~~--~~~~~i~~nG~~i~ 138 (328)
++++||+||||+.. ...++ .+.++|++|++++ +|+++|| |+...+.+.+ |+ ..-.++.++|+.+.
T Consensus 2 ~~~~~D~DGtl~~~-----~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~ 75 (249)
T TIGR01457 2 KGYLIDLDGTMYKG-----KERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD 75 (249)
T ss_pred CEEEEeCCCceEcC-----CeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH
Confidence 47899999999983 23344 7999999999994 8999995 8888877755 33 22246777777543
No 51
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.31 E-value=1e-06 Score=72.03 Aligned_cols=52 Identities=13% Similarity=0.111 Sum_probs=40.2
Q ss_pred EEEEEecCCcccCCCCCC-CcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHH
Q 020285 68 IVMFLDYDGTLSPIVENP-DRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVY 119 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p-~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~ 119 (328)
+++++|+||||+.....+ ....+.+++.++|+++++. +.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 478999999998742111 1234778999999999877 589999999987765
No 52
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.24 E-value=2.8e-06 Score=78.58 Aligned_cols=73 Identities=19% Similarity=0.114 Sum_probs=54.3
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcccC-ChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhh---Ccccc-eEecCCCcee
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRAFM-SGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAEL-YYAGSHGMDI 137 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~~i-s~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~---~~~~~-~~i~~nG~~i 137 (328)
=....+|+||+||||++.. ....| +|.+.++|++|++.+ +++|+|++++..+...+ |+... ..+.++|...
T Consensus 123 ~~~~kvIvFDLDgTLi~~~---~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~ 199 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDE---EPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA 199 (301)
T ss_pred cccceEEEEecCCCCcCCC---CccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc
Confidence 3455789999999999942 11224 499999999999994 99999999998887655 55543 3677777765
Q ss_pred eC
Q 020285 138 KG 139 (328)
Q Consensus 138 ~~ 139 (328)
..
T Consensus 200 ~~ 201 (301)
T TIGR01684 200 EE 201 (301)
T ss_pred cC
Confidence 54
No 53
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.96 E-value=1.8e-05 Score=73.34 Aligned_cols=72 Identities=15% Similarity=0.016 Sum_probs=53.8
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcccC---ChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhh---Ccccc-eEecCCCc
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRAFM---SGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAEL-YYAGSHGM 135 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~~i---s~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~---~~~~~-~~i~~nG~ 135 (328)
-...++++||+||||++. ...+ +|.+.++|.+|++.+ +++|+|+.++..+...+ ++... ..+.++|.
T Consensus 125 ~~~~~~i~~D~D~TL~~~-----~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITD-----EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred eeeccEEEEecCCCccCC-----CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 345688999999999993 3345 689999999999995 89999988888777655 45443 35666666
Q ss_pred eeeCC
Q 020285 136 DIKGP 140 (328)
Q Consensus 136 ~i~~~ 140 (328)
.....
T Consensus 200 i~~k~ 204 (303)
T PHA03398 200 KAGEY 204 (303)
T ss_pred ccccc
Confidence 55544
No 54
>PRK06769 hypothetical protein; Validated
Probab=97.87 E-value=0.00011 Score=63.28 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=37.1
Q ss_pred CEEEEEecCCcccCCCC--CCCcccCChHHHHHHHHHHhc-CCEEEEcCCC
Q 020285 67 QIVMFLDYDGTLSPIVE--NPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRC 114 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~--~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~ 114 (328)
-++|++|.||||.+++. .++.-.+-|.++++|++|++. .+++|+|+.+
T Consensus 4 ~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~ 54 (173)
T PRK06769 4 IQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP 54 (173)
T ss_pred CcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence 47899999999977532 122344668999999999988 5899999864
No 55
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.73 E-value=0.00024 Score=75.84 Aligned_cols=62 Identities=23% Similarity=0.211 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEe--CChhHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSASYSL--REPDEVMDFLQ 311 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~--t~A~~~l--~~~~~V~~~L~ 311 (328)
+|..+++.+.+. .+ .++++||+.||.+|++.+ |+||+|+++... ..|++++ ++.+++..+++
T Consensus 700 ~K~~~i~~l~~~----~~---~v~~vGDg~nD~~al~~A-----gvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 700 GKAEAIKRLQSQ----GR---QVAMVGDGINDAPALAQA-----DVGIAMGGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHHHHHHHHhhc----CC---EEEEEeCCHHHHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 477777766532 33 699999999999999998 899999997653 5677766 57888888876
No 56
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.62 E-value=0.00032 Score=71.47 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=45.2
Q ss_pred hcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC--CEEEEcCCChhhHHhhhC
Q 020285 63 SKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~v~~~~~ 123 (328)
.....+.+++..||++.....- ...+-|.+.++|++|++.+ +++|+||.+...+..+..
T Consensus 360 ~~~g~~~~~v~~~~~~~g~i~~--~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~ 420 (556)
T TIGR01525 360 ESQGKTVVFVAVDGELLGVIAL--RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAA 420 (556)
T ss_pred hhCCcEEEEEEECCEEEEEEEe--cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHH
Confidence 3445677888899988875421 2357889999999998874 899999999888777653
No 57
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.00014 Score=64.85 Aligned_cols=48 Identities=31% Similarity=0.270 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP 291 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~ 291 (328)
+-.|..+++.+++.+|++.+ .++++|||.||.+||+.+ |++|++...+
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~---~~~a~gDs~nDlpml~~a-----g~~ia~n~~~ 189 (212)
T COG0560 142 GEGKAKALRELAAELGIPLE---ETVAYGDSANDLPMLEAA-----GLPIAVNPKP 189 (212)
T ss_pred cchHHHHHHHHHHHcCCCHH---HeEEEcCchhhHHHHHhC-----CCCeEeCcCH
Confidence 34799999999999999976 899999999999999998 8899987443
No 58
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.51 E-value=0.00017 Score=59.02 Aligned_cols=55 Identities=20% Similarity=0.205 Sum_probs=40.4
Q ss_pred EEEEEecCCcccCCCCCCCcc-------cCChHHHHHHHHHHhc-CCEEEEcCC-ChhhHHhhh
Q 020285 68 IVMFLDYDGTLSPIVENPDRA-------FMSGKMRRAVRQLAKY-FPTAIVTGR-CRDKVYDFV 122 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~-------~is~~~~~aL~~L~~~-~~v~I~SGR-~~~~v~~~~ 122 (328)
+++++|+||||++........ .+-+.+.+.|+.|+++ .+++|+|++ +...+...+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH
Confidence 478999999999862110011 2467999999999988 499999999 666565555
No 59
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.44 E-value=0.00015 Score=66.65 Aligned_cols=64 Identities=20% Similarity=0.207 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCc-CCHHHHHHHHhCCCce-EEEEcCCC-----C---CccceEEeCChhHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKFP-----K---KTSASYSLREPDEVMD 308 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~-nD~~Mf~~~~~~~~g~-~v~v~n~~-----~---~t~A~~~l~~~~~V~~ 308 (328)
+-..++.+++.+|++++ .+++|||+. +|+.+=+.+ |+ +|.|..+. . +..++|++++..++.+
T Consensus 181 ~p~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~~-----G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~ 252 (257)
T TIGR01458 181 SKTFFLEALRATGCEPE---EAVMIGDDCRDDVGGAQDC-----GMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVD 252 (257)
T ss_pred CHHHHHHHHHHhCCChh---hEEEECCCcHHHHHHHHHc-----CCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence 45577888899998876 899999995 998776665 43 66665431 1 1346789999988877
Q ss_pred HH
Q 020285 309 FL 310 (328)
Q Consensus 309 ~L 310 (328)
+|
T Consensus 253 ~l 254 (257)
T TIGR01458 253 LI 254 (257)
T ss_pred HH
Confidence 64
No 60
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.44 E-value=0.00015 Score=59.26 Aligned_cols=47 Identities=28% Similarity=0.381 Sum_probs=36.7
Q ss_pred EEEEEecCCcccCCC--CCC-CcccCChHHHHHHHHHHhc-CCEEEEcCCC
Q 020285 68 IVMFLDYDGTLSPIV--ENP-DRAFMSGKMRRAVRQLAKY-FPTAIVTGRC 114 (328)
Q Consensus 68 ~li~~D~DGTL~~~~--~~p-~~~~is~~~~~aL~~L~~~-~~v~I~SGR~ 114 (328)
++++||+||||++.. .++ ....+.+.++++|+.|++. .+++|+|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence 468999999999521 111 1346789999999999988 5999999998
No 61
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.41 E-value=0.00031 Score=60.30 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=36.2
Q ss_pred CCEEEEEecCCcccCCCC------CCCccc-CChHHHHHHHHHHhc-CCEEEEcCCCh
Q 020285 66 KQIVMFLDYDGTLSPIVE------NPDRAF-MSGKMRRAVRQLAKY-FPTAIVTGRCR 115 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~------~p~~~~-is~~~~~aL~~L~~~-~~v~I~SGR~~ 115 (328)
+++++++|+||||+.... +|++-. +-+.+.++|++|.+. .+++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 467889999999997421 122111 347899999999988 58999996554
No 62
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.40 E-value=0.001 Score=68.87 Aligned_cols=134 Identities=18% Similarity=0.224 Sum_probs=92.5
Q ss_pred hcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhhCcccceEecCCCceeeCCC
Q 020285 63 SKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPT 141 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~i~~~~ 141 (328)
++...+.+++-+|++++....= ...+-|+.++++++|++.+ +++++||-....+..+....++ .
T Consensus 422 a~~G~r~l~va~~~~~lG~i~l--~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI--------~----- 486 (675)
T TIGR01497 422 ARQGGTPLVVCEDNRIYGVIYL--KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV--------D----- 486 (675)
T ss_pred HhCCCeEEEEEECCEEEEEEEe--cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC--------C-----
Confidence 4444456666678888764321 1247789999999999984 8999999888777665432111 0
Q ss_pred CCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhhCCCeE
Q 020285 142 KGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYPQLN 221 (328)
Q Consensus 142 ~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~~~~l~ 221 (328)
.
T Consensus 487 -~------------------------------------------------------------------------------ 487 (675)
T TIGR01497 487 -D------------------------------------------------------------------------------ 487 (675)
T ss_pred -E------------------------------------------------------------------------------
Confidence 0
Q ss_pred EEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEE
Q 020285 222 WRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYS 299 (328)
Q Consensus 222 ~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~ 299 (328)
.+-++.|. +|...++.+.+.. . .+.++||+.||.++|+.+ ++||+|+++.. +..|+++
T Consensus 488 -----v~a~~~Pe---dK~~~v~~lq~~g----~---~VamvGDG~NDapAL~~A-----dvGiAm~~gt~~akeaadiv 547 (675)
T TIGR01497 488 -----FIAEATPE---DKIALIRQEQAEG----K---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMV 547 (675)
T ss_pred -----EEcCCCHH---HHHHHHHHHHHcC----C---eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEE
Confidence 01124566 6888888876542 1 599999999999999998 89999998764 4678988
Q ss_pred eC--ChhHHHHHH
Q 020285 300 LR--EPDEVMDFL 310 (328)
Q Consensus 300 l~--~~~~V~~~L 310 (328)
+- ++..+.+.+
T Consensus 548 Lldd~~s~Iv~av 560 (675)
T TIGR01497 548 DLDSDPTKLIEVV 560 (675)
T ss_pred ECCCCHHHHHHHH
Confidence 74 566655544
No 63
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.37 E-value=0.00044 Score=62.74 Aligned_cols=68 Identities=16% Similarity=0.108 Sum_probs=45.5
Q ss_pred hhCCCCcchHHHHHHhhcCCCE-EEEEecCCcccCCCCC-------CCc--------------------c--cCChHHHH
Q 020285 47 IRHPSALDMFHEITEASKGKQI-VMFLDYDGTLSPIVEN-------PDR--------------------A--FMSGKMRR 96 (328)
Q Consensus 47 ~~~~~al~~~~~~~~~~~~k~~-li~~D~DGTL~~~~~~-------p~~--------------------~--~is~~~~~ 96 (328)
.+.|=-.=+.++|.+..++++. .|+||+||||+..... ++. . .+-+..++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~e 121 (237)
T TIGR01672 42 EQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQ 121 (237)
T ss_pred ccCCeeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHH
Confidence 3444333346899988888765 8999999999975330 010 0 11112778
Q ss_pred HHHHHHhcC-CEEEEcCCC
Q 020285 97 AVRQLAKYF-PTAIVTGRC 114 (328)
Q Consensus 97 aL~~L~~~~-~v~I~SGR~ 114 (328)
.|+.+.+++ +++|||+|.
T Consensus 122 lL~~l~~~G~~i~iVTnr~ 140 (237)
T TIGR01672 122 LIDMHQRRGDAIFFVTGRT 140 (237)
T ss_pred HHHHHHHCCCEEEEEeCCC
Confidence 888888884 899999993
No 64
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.31 E-value=0.0011 Score=67.37 Aligned_cols=61 Identities=20% Similarity=0.175 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEc-CCCC--CccceEEe--CChhHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS-KFPK--KTSASYSL--REPDEVMDFL 310 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~-n~~~--~t~A~~~l--~~~~~V~~~L 310 (328)
+|...++.+.+.. + .++++||+.||.+|++.+ |.||+++ ++.. +..|++++ ++..++.+++
T Consensus 413 ~K~~~i~~l~~~~----~---~v~~vGDg~nD~~al~~A-----~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 413 DKLEIVKELREKY----G---PVAMVGDGINDAPALAAA-----DVGIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred HHHHHHHHHHhcC----C---EEEEEeCCHHHHHHHHhC-----CEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 4555555554332 2 799999999999999998 8999999 5433 35789988 6788876654
No 65
>PRK10444 UMP phosphatase; Provisional
Probab=97.28 E-value=0.0003 Score=64.29 Aligned_cols=48 Identities=15% Similarity=0.141 Sum_probs=40.4
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhh
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDF 121 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~ 121 (328)
++++||+||||+.. . .+.|...++|++|++. .+++++|+|+......+
T Consensus 2 ~~v~~DlDGtL~~~-----~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~ 50 (248)
T PRK10444 2 KNVICDIDGVLMHD-----N-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDL 50 (248)
T ss_pred cEEEEeCCCceEeC-----C-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Confidence 46899999999982 2 5788999999999998 49999999999766554
No 66
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=97.25 E-value=0.026 Score=53.91 Aligned_cols=196 Identities=15% Similarity=0.179 Sum_probs=103.3
Q ss_pred HHHHhhc-CCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh----Cc-------
Q 020285 58 EITEASK-GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV----KL------- 124 (328)
Q Consensus 58 ~~~~~~~-~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~----~~------- 124 (328)
||++..+ ++=+|+-||=|+||.....+- ..+..+..-|-+|-+. ..|+|+|.=.+....++. |+
T Consensus 137 Qi~al~~~~~L~LvTFDgDvTLY~DG~sl---~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~ 213 (408)
T PF06437_consen 137 QIMALAKNYGLKLVTFDGDVTLYEDGASL---EPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLHGLLDAFKDS 213 (408)
T ss_pred HHHHhcccCCceEEEEcCCcccccCCCCC---CCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHHHHHHHHHhc
Confidence 5666654 466899999999999854321 1244566666666565 699999998887755542 21
Q ss_pred c--------cceE-ecCCCceeeCCCC-C--ccccccCceeccCCCcccc-hHHHHHHHHH----HHHhh--cCCCcEEE
Q 020285 125 A--------ELYY-AGSHGMDIKGPTK-G--LKYNQKSKVVNFQPASEFL-PLIDKVYKVL----VEKTK--STPGARVE 185 (328)
Q Consensus 125 ~--------~~~~-i~~nG~~i~~~~~-~--~~~~~~~e~~~~~~~~~~~-~~i~ev~~~l----~~~~~--~~~g~~ie 185 (328)
+ .+++ -|+.-........ . ..+-...+|.+... ..|. ..+.++++.. ....+ ..| +.|-
T Consensus 214 ~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m-~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp-a~Ii 291 (408)
T PF06437_consen 214 TDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPEM-KTWSEEDITELLDIAEAALRDCVKRLNLP-ATII 291 (408)
T ss_pred cCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCccc-cCcCHHHHHHHHHHHHHHHHHHHHHcCCC-eeEE
Confidence 1 1222 2222222222211 1 00111123433211 2232 2233444332 22221 234 5566
Q ss_pred ecCcEEEEEcCCC---ChhhHHHHHHHHHHHHhhCC-C--eEE--Eec-C-eEEEEEcCCCCCHHHHHHHHHHHc----C
Q 020285 186 NNKFCISVHFRCV---DEKKWNDLAQKVKEVVNEYP-Q--LNW--RQG-R-MVMEIRPKIEWDKGKALEFLLECL----G 251 (328)
Q Consensus 186 ~~~~~~~~~~r~~---~~~~~~~~~~~v~~~l~~~~-~--l~~--~~g-~-~~lEI~p~~~~~KG~al~~Ll~~l----g 251 (328)
.|+.++-+-...- .-+.++++.-.++..|+..+ + +.+ ..| . -|+| || ||.-||+.+.+.+ +
T Consensus 292 RK~RAVGivP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVD----IG-dKs~GV~~lQ~y~~~~~~ 366 (408)
T PF06437_consen 292 RKERAVGIVPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVD----IG-DKSLGVRALQKYFDPEGG 366 (408)
T ss_pred eecceeeEecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEE----cC-CcHHhHHHHHHHHHhccC
Confidence 6666665543211 11233344334455555442 2 333 333 3 3455 35 8999999999999 8
Q ss_pred CCCCCCceEEEEeCC
Q 020285 252 FADCSNVFPVYIGDD 266 (328)
Q Consensus 252 ~~~~~~~~~i~~GD~ 266 (328)
+.++ +++-+||.
T Consensus 367 i~~~---~tLHVGDQ 378 (408)
T PF06437_consen 367 IKPS---ETLHVGDQ 378 (408)
T ss_pred CCcc---ceeeehhh
Confidence 9887 89999995
No 67
>PLN02645 phosphoglycolate phosphatase
Probab=97.21 E-value=0.00046 Score=65.15 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCc-CCHHHHHHHHhCCCc-eEEEEcCCC--C--------CccceEEeCChhHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQG-FGILVSKFP--K--------KTSASYSLREPDEV 306 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~-nD~~Mf~~~~~~~~g-~~v~v~n~~--~--------~t~A~~~l~~~~~V 306 (328)
+-..++.+++.++++.+ .+++|||+. +|+.+=+.+ | .+|.|..+. . .-.++|++++..++
T Consensus 232 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 232 STFMMDYLANKFGIEKS---QICMVGDRLDTDILFGQNG-----GCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred hHHHHHHHHHHcCCCcc---cEEEEcCCcHHHHHHHHHc-----CCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 34567888888988876 799999996 998876665 4 366664432 1 12468899999888
Q ss_pred HHHHH
Q 020285 307 MDFLQ 311 (328)
Q Consensus 307 ~~~L~ 311 (328)
.++++
T Consensus 304 ~~~~~ 308 (311)
T PLN02645 304 LTLKA 308 (311)
T ss_pred HHHhh
Confidence 77654
No 68
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.12 E-value=0.00064 Score=63.13 Aligned_cols=44 Identities=18% Similarity=0.108 Sum_probs=35.1
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhh
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 117 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~ 117 (328)
++++||+||||... . ..-+.+.++|++|++.+ +++++|+|+...
T Consensus 3 ~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~ 47 (279)
T TIGR01452 3 QGFIFDCDGVLWLG-----E-RVVPGAPELLDRLARAGKAALFVTNNSTKS 47 (279)
T ss_pred cEEEEeCCCceEcC-----C-eeCcCHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 57899999999882 2 23455999999999884 999999987543
No 69
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.10 E-value=0.0023 Score=67.46 Aligned_cols=60 Identities=23% Similarity=0.246 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--ChhHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFL 310 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~~~V~~~L 310 (328)
+|...++.+.+. . .++++||+.||.++++.+ ++||+|+++.. ...|++++- +..++..++
T Consensus 617 ~K~~~v~~l~~~-----~---~v~mvGDgiNDapAl~~A-----~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 617 DKVKAVTELNQH-----A---PLAMVGDGINDAPAMKAA-----SIGIAMGSGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred HHHHHHHHHhcC-----C---CEEEEECCHHhHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 577777776531 2 599999999999999998 79999998764 256888773 555655443
No 70
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.10 E-value=0.00032 Score=62.31 Aligned_cols=59 Identities=32% Similarity=0.436 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC-CccceEEeCChh
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK-KTSASYSLREPD 304 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~-~t~A~~~l~~~~ 304 (328)
.|...++.+++.++++++ ++++|||+.+|++|.+.+ |+++++...+. ...|+|++.+.+
T Consensus 152 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~Di~aa~~a-----g~~i~~~~~~~~~~~a~~~i~~~~ 211 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPE---NTVAVGDGANDLSMIKAA-----GLGIAFNAKPKLQQKADICINKKD 211 (219)
T ss_pred ccHHHHHHHHHHcCCCHH---HEEEEECCHHHHHHHHhC-----CCeEEeCCCHHHHHhchhccCCCC
Confidence 489999999999999876 899999999999999988 78888854332 367899987553
No 71
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.92 E-value=0.0008 Score=58.02 Aligned_cols=61 Identities=18% Similarity=0.073 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceE--EEEcCCCC-----CccceEEeCChhHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFG--ILVSKFPK-----KTSASYSLREPDEVM 307 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~--v~v~n~~~-----~t~A~~~l~~~~~V~ 307 (328)
+-..+...++.+|++++ .+++|||+.+|+.+=+.+ |+. +.|.-+.. +..|+++++++.++.
T Consensus 108 ~p~~~~~a~~~~~~~~~---~~v~VGDs~~Di~aA~~a-----G~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 108 KPGMLLQARKELHIDMA---QSYMVGDKLEDMQAGVAA-----KVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CHHHHHHHHHHcCcChh---hEEEEcCCHHHHHHHHHC-----CCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 45567888899999877 799999999998777665 553 45543321 124889998888764
No 72
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.84 E-value=0.0013 Score=57.33 Aligned_cols=45 Identities=27% Similarity=0.298 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKF 290 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~ 290 (328)
+|+.+++.+++.+|++++ .+++|||+.+|.+|++.+ |+++++...
T Consensus 147 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~D~~~a~~a-----g~~~a~~~~ 191 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLT---ETVAVGDSKNDLPMFEVA-----DISISLGDE 191 (201)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEEcCCHhHHHHHHhc-----CCeEEECCC
Confidence 699999999999999876 799999999999999998 899988653
No 73
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.82 E-value=0.0021 Score=59.38 Aligned_cols=81 Identities=17% Similarity=0.090 Sum_probs=57.0
Q ss_pred chHHHHHhhhh-CCCCcchHHHHHHhhcCCCEEEEEecCCcccCCC--------CC----C---------CcccCChHHH
Q 020285 38 LLEEKRAWIIR-HPSALDMFHEITEASKGKQIVMFLDYDGTLSPIV--------EN----P---------DRAFMSGKMR 95 (328)
Q Consensus 38 ~~~~~~~w~~~-~~~al~~~~~~~~~~~~k~~li~~D~DGTL~~~~--------~~----p---------~~~~is~~~~ 95 (328)
.+.+|++-..+ +-.|-..|++.+...++++.+++||+|+|++... .. + ..+.+-|.+.
T Consensus 45 ~S~Ey~al~~q~~n~A~~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~ 124 (266)
T TIGR01533 45 RSAEYKALYLQAYNLAKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGAL 124 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHH
Confidence 34555554444 4566677888777667888999999999998532 10 1 1234557889
Q ss_pred HHHHHHHhc-CCEEEEcCCChhhH
Q 020285 96 RAVRQLAKY-FPTAIVTGRCRDKV 118 (328)
Q Consensus 96 ~aL~~L~~~-~~v~I~SGR~~~~v 118 (328)
+.|+.|.++ .+++|+|+|+....
T Consensus 125 e~L~~L~~~G~~v~iVTnR~~~~~ 148 (266)
T TIGR01533 125 DFLNYANSKGVKIFYVSNRSEKEK 148 (266)
T ss_pred HHHHHHHHCCCeEEEEeCCCcchH
Confidence 999999888 49999999985543
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.76 E-value=0.0031 Score=55.99 Aligned_cols=67 Identities=18% Similarity=0.168 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCC--C----CccceEEeCChhHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--K----KTSASYSLREPDEVMDFL 310 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~--~----~t~A~~~l~~~~~V~~~L 310 (328)
.+..+++.+++.++++++ .+++|||+.+|+.+.+.+ |+ +|.|..+. . ...+.|+++++.++..+|
T Consensus 150 p~~~~~~~~~~~~~~~~~---~~i~igD~~~Di~~a~~~-----g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPE---EMLFVGDSRNDIQAARAA-----GCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred cChHHHHHHHHHcCCChh---heEEECCCHHHHHHHHHC-----CCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 357789999999999876 899999999999999987 54 56664331 1 246889999999998887
Q ss_pred HH
Q 020285 311 QK 312 (328)
Q Consensus 311 ~~ 312 (328)
.+
T Consensus 222 ~~ 223 (226)
T PRK13222 222 GL 223 (226)
T ss_pred HH
Confidence 54
No 75
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.68 E-value=0.001 Score=56.74 Aligned_cols=40 Identities=30% Similarity=0.287 Sum_probs=35.3
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHH
Q 020285 232 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 275 (328)
Q Consensus 232 ~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~ 275 (328)
.|. +.+|+.+++.+++.+|++.+ .+++|||+.||.+|++.
T Consensus 137 ~~~-~~~K~~~l~~~~~~~~~~~~---~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 137 NPE-GECKGKVLKELLEESKITLK---KIIAVGDSVNDLPMLKL 176 (177)
T ss_pred cCC-cchHHHHHHHHHHHhCCCHH---HEEEEeCCHHHHHHHhc
Confidence 355 78999999999999988765 79999999999999975
No 76
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.65 E-value=0.0094 Score=53.11 Aligned_cols=47 Identities=28% Similarity=0.319 Sum_probs=37.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEE
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILV 287 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v 287 (328)
|--|...++.+++.-+++- -++|+|||.+|.+||+.++.+| |++|+-
T Consensus 189 gg~ka~i~e~~~ele~~d~----sa~~VGDSItDv~ml~~~rgrG-glAvaF 235 (315)
T COG4030 189 GGEKAKIMEGYCELEGIDF----SAVVVGDSITDVKMLEAARGRG-GLAVAF 235 (315)
T ss_pred CcchhHHHHHHHhhcCCCc----ceeEecCcccchHHHHHhhccC-ceEEEe
Confidence 4467888888888877664 3899999999999999998765 566654
No 77
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.63 E-value=0.0036 Score=56.87 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=25.1
Q ss_pred hCCCCcchHHHHHHhhcCCC-EEEEEecCCcccC
Q 020285 48 RHPSALDMFHEITEASKGKQ-IVMFLDYDGTLSP 80 (328)
Q Consensus 48 ~~~~al~~~~~~~~~~~~k~-~li~~D~DGTL~~ 80 (328)
+.|=-.=++++|.+..++|+ ..+.+|+|||++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~p~av~~DIDeTvld 76 (237)
T PRK11009 43 QAPVHWVSVAQIEKSLEGRPPMAVGFDIDDTVLF 76 (237)
T ss_pred cCCeeEEEHHHhhhhccCCCCcEEEEECcCcccc
Confidence 44433345789998888874 4899999999994
No 78
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.59 E-value=0.0077 Score=61.53 Aligned_cols=67 Identities=22% Similarity=0.280 Sum_probs=51.0
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--Chh
Q 020285 229 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPD 304 (328)
Q Consensus 229 lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~~ 304 (328)
-++.|. +|...++.+.+. .+ .++++||+.||.+|++.+ |+||+|+++.. ...|++++. +.+
T Consensus 448 ~~~~p~---~K~~~v~~l~~~----~~---~v~~VGDg~nD~~al~~A-----~vgia~g~g~~~a~~~Advvl~~~~l~ 512 (562)
T TIGR01511 448 AEVLPD---DKAALIKELQEK----GR---VVAMVGDGINDAPALAQA-----DVGIAIGAGTDVAIEAADVVLMRNDLN 512 (562)
T ss_pred ccCChH---HHHHHHHHHHHc----CC---EEEEEeCCCccHHHHhhC-----CEEEEeCCcCHHHHhhCCEEEeCCCHH
Confidence 345555 788888887652 23 799999999999999998 89999997653 356899884 666
Q ss_pred HHHHHH
Q 020285 305 EVMDFL 310 (328)
Q Consensus 305 ~V~~~L 310 (328)
++..++
T Consensus 513 ~l~~~i 518 (562)
T TIGR01511 513 DVATAI 518 (562)
T ss_pred HHHHHH
Confidence 666654
No 79
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=96.58 E-value=0.0024 Score=55.79 Aligned_cols=46 Identities=22% Similarity=0.104 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcC
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 289 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n 289 (328)
+-.|..+++.+++..+++.+ .++++||+.+|.+|++.+ |.+++|..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~---~~~~~gDs~~D~~~~~~a-----~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLK---DSYAYGDSISDLPLLSLV-----GHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHH---HcEeeeCCcccHHHHHhC-----CCcEEeCC
Confidence 55788999999999998765 799999999999999998 77888764
No 80
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.57 E-value=0.023 Score=61.26 Aligned_cols=161 Identities=16% Similarity=0.247 Sum_probs=95.8
Q ss_pred hcCCCEEEEEecCC-----cccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCcccceEecCCCce
Q 020285 63 SKGKQIVMFLDYDG-----TLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKLAELYYAGSHGMD 136 (328)
Q Consensus 63 ~~~k~~li~~D~DG-----TL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~~~~~~i~~nG~~ 136 (328)
++...+++++=+++ |++....- ...+-+++.++|++|++. .+++++||-.......+....++ ...++..
T Consensus 499 a~~G~rvl~~A~~~~~~~l~~lGli~l--~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi--~~~~~~~ 574 (884)
T TIGR01522 499 ASAGLRVIAFASGPEKGQLTFLGLVGI--NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGM--PSKTSQS 574 (884)
T ss_pred HhcCCEEEEEEEEcCCCCeEEEEEEec--cCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC--CCCCCce
Confidence 44444666666655 45543210 124678999999999998 49999999999988876532111 1111110
Q ss_pred eeCCCCCccccccCceeccCCCcccchHHHHHHHHHHHHhhcCCCcEEEecCcEEEEEcCCCChhhHHHHHHHHHHHHhh
Q 020285 137 IKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNE 216 (328)
Q Consensus 137 i~~~~~~~~~~~~~e~~~~~~~~~~~~~i~ev~~~l~~~~~~~~g~~ie~~~~~~~~~~r~~~~~~~~~~~~~v~~~l~~ 216 (328)
+- + +++. ..+++ ++.+.+++
T Consensus 575 v~---g-----------------------~~l~---------------------------~~~~~-------~l~~~~~~ 594 (884)
T TIGR01522 575 VS---G-----------------------EKLD---------------------------AMDDQ-------QLSQIVPK 594 (884)
T ss_pred eE---h-----------------------HHhH---------------------------hCCHH-------HHHHHhhc
Confidence 00 0 0000 00111 12222221
Q ss_pred CCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCC-CC--C
Q 020285 217 YPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKF-PK--K 293 (328)
Q Consensus 217 ~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~-~~--~ 293 (328)
.. -+-.+.|. +|...++.+.+. | + .+.++||+.||.+|++.+ ++||+||+. .. +
T Consensus 595 ---~~-----Vfar~~P~---~K~~iv~~lq~~-g---~---~v~mvGDGvND~pAl~~A-----dVGia~g~~g~~va~ 651 (884)
T TIGR01522 595 ---VA-----VFARASPE---HKMKIVKALQKR-G---D---VVAMTGDGVNDAPALKLA-----DIGVAMGQTGTDVAK 651 (884)
T ss_pred ---Ce-----EEEECCHH---HHHHHHHHHHHC-C---C---EEEEECCCcccHHHHHhC-----CeeEecCCCcCHHHH
Confidence 22 23345676 787777776543 3 2 699999999999999998 799999853 32 3
Q ss_pred ccceEEeC--ChhHHHHHH
Q 020285 294 TSASYSLR--EPDEVMDFL 310 (328)
Q Consensus 294 t~A~~~l~--~~~~V~~~L 310 (328)
..|++++- +...+...+
T Consensus 652 ~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 652 EAADMILTDDDFATILSAI 670 (884)
T ss_pred HhcCEEEcCCCHHHHHHHH
Confidence 67899984 466655543
No 81
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=96.42 E-value=0.0029 Score=53.88 Aligned_cols=44 Identities=36% Similarity=0.516 Sum_probs=31.7
Q ss_pred EEEEEecCCcccCCC------CCCCc-ccCChHHHHHHHHHHhcC-CEEEEc
Q 020285 68 IVMFLDYDGTLSPIV------ENPDR-AFMSGKMRRAVRQLAKYF-PTAIVT 111 (328)
Q Consensus 68 ~li~~D~DGTL~~~~------~~p~~-~~is~~~~~aL~~L~~~~-~v~I~S 111 (328)
++.+||+||||.... .+|++ ..+.+.+.++|++|.+.+ .++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 468999999998642 23444 346778999999998885 888887
No 82
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=96.41 E-value=0.0035 Score=54.88 Aligned_cols=65 Identities=18% Similarity=0.194 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceE-EeCChhHHHHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASY-SLREPDEVMDFLQKLV 314 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~-~l~~~~~V~~~L~~l~ 314 (328)
.|..+++.+. ..++ .+++|||+.||.+|.+.+ |.||.++.... ...+.+ ++.++.++.++|.+..
T Consensus 132 ~k~~~l~~~~----~~~~---~~v~iGDs~~D~~~~~aa-----~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 132 GKRQAVKALK----SLGY---RVIAAGDSYNDTTMLGEA-----DAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred hHHHHHHHHH----HhCC---eEEEEeCCHHHHHHHHhC-----CCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHH
Confidence 4655555443 2233 799999999999999987 66777654321 124454 7899999998887765
No 83
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.41 E-value=0.0062 Score=51.03 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=43.8
Q ss_pred CCEEEEEecCCcccCCCC--CCC-------------------cccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhC
Q 020285 66 KQIVMFLDYDGTLSPIVE--NPD-------------------RAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~--~p~-------------------~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 123 (328)
+|.++++|+||||+.... .+. ...+-|.+.+.|+.|++..+++|+|+.+...+..++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHH
Confidence 467899999999998531 111 0134578899999998667999999999998887664
No 84
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.38 E-value=0.0086 Score=55.85 Aligned_cols=59 Identities=20% Similarity=0.178 Sum_probs=46.0
Q ss_pred CCCEEEEEecCCcccCCCCC----CC---cccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 65 GKQIVMFLDYDGTLSPIVEN----PD---RAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 65 ~k~~li~~D~DGTL~~~~~~----p~---~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
++..++++|+||||...... +. ...+.+.+.++|++|.+. .+++|+|||+.......+.
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHH
Confidence 34678889999999975431 11 346788999999999988 4899999999988766553
No 85
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.32 E-value=0.0055 Score=66.16 Aligned_cols=66 Identities=20% Similarity=0.267 Sum_probs=48.3
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCC--hh
Q 020285 229 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLRE--PD 304 (328)
Q Consensus 229 lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~~--~~ 304 (328)
-.+.|. +|...++.+. .. .+ .+.++||+.||.+|++.+ ++||+|+++.. +..|+|++.+ ..
T Consensus 612 ar~~P~---~K~~iV~~lq-~~---g~---~va~iGDG~ND~~alk~A-----dVGia~g~g~~~ak~aAD~vl~dd~f~ 676 (917)
T TIGR01116 612 SRVEPS---HKSELVELLQ-EQ---GE---IVAMTGDGVNDAPALKKA-----DIGIAMGSGTEVAKEASDMVLADDNFA 676 (917)
T ss_pred EecCHH---HHHHHHHHHH-hc---CC---eEEEecCCcchHHHHHhC-----CeeEECCCCcHHHHHhcCeEEccCCHH
Confidence 344565 6888877654 32 22 578899999999999998 89999998753 4679999976 44
Q ss_pred HHHHH
Q 020285 305 EVMDF 309 (328)
Q Consensus 305 ~V~~~ 309 (328)
.+.+.
T Consensus 677 ~i~~~ 681 (917)
T TIGR01116 677 TIVAA 681 (917)
T ss_pred HHHHH
Confidence 54443
No 86
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.31 E-value=0.011 Score=50.85 Aligned_cols=52 Identities=19% Similarity=0.109 Sum_probs=41.0
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCC-hhhHHhh
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRC-RDKVYDF 121 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~-~~~v~~~ 121 (328)
.-+++++|+||||+.. +...+.+.+.++|+.|.+. .+++|+|+.+ ...+..+
T Consensus 24 ~v~~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~ 77 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYP----DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAV 77 (170)
T ss_pred CCCEEEEecCCccccC----CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHH
Confidence 4477999999999984 2336788999999999988 5999999998 4444444
No 87
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.29 E-value=0.0045 Score=51.72 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=34.8
Q ss_pred EEEEecCCcccCCCCC-----CCcccCChHHHHHHHHHHhc-CCEEEEcCCC
Q 020285 69 VMFLDYDGTLSPIVEN-----PDRAFMSGKMRRAVRQLAKY-FPTAIVTGRC 114 (328)
Q Consensus 69 li~~D~DGTL~~~~~~-----p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~ 114 (328)
+++||+||||...... .+...+-|.+.++|+.|.++ .+++|+|..+
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 5899999999985421 11224578899999999988 4899999874
No 88
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.28 E-value=0.0045 Score=48.53 Aligned_cols=44 Identities=18% Similarity=0.115 Sum_probs=32.8
Q ss_pred EEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHH
Q 020285 70 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY 119 (328)
Q Consensus 70 i~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~ 119 (328)
++||+||||... ..+-|...++|++|++.+ +++++|-.+...-.
T Consensus 1 ~l~D~dGvl~~g------~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~ 45 (101)
T PF13344_consen 1 FLFDLDGVLYNG------NEPIPGAVEALDALRERGKPVVFLTNNSSRSRE 45 (101)
T ss_dssp EEEESTTTSEET------TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HH
T ss_pred CEEeCccEeEeC------CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHH
Confidence 689999999982 345678899999999995 89999866644433
No 89
>PLN02954 phosphoserine phosphatase
Probab=96.26 E-value=0.0088 Score=53.16 Aligned_cols=67 Identities=21% Similarity=0.243 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC-C---CccceEEeCChhHHHHHH
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP-K---KTSASYSLREPDEVMDFL 310 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~-~---~t~A~~~l~~~~~V~~~L 310 (328)
+-.|..+++.+++.+|.+ .+++|||+.||+.|.+.. +..+.++.+... . ...|+|++.++.++.++|
T Consensus 153 ~~~K~~~i~~~~~~~~~~-----~~i~iGDs~~Di~aa~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYK-----TMVMIGDGATDLEARKPG---GADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcCCC-----ceEEEeCCHHHHHhhhcC---CCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 446999999999998863 699999999999995553 112334333221 1 235899999999887764
No 90
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.20 E-value=0.026 Score=61.96 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=48.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCCh
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLREP 303 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~~~ 303 (328)
-+--+.|. .|..-++.|.+ .|. .+.+.||+.||.+|++.+ ..||+|+++....+|++++.++
T Consensus 781 VfAR~sP~---qK~~iV~~lq~-~g~------~V~m~GDG~ND~~ALK~A-----dVGIam~~~das~AA~f~l~~~ 842 (1054)
T TIGR01657 781 VFARMAPD---QKETLVELLQK-LDY------TVGMCGDGANDCGALKQA-----DVGISLSEAEASVAAPFTSKLA 842 (1054)
T ss_pred EEEecCHH---HHHHHHHHHHh-CCC------eEEEEeCChHHHHHHHhc-----CcceeeccccceeecccccCCC
Confidence 34457788 79999998875 332 589999999999999998 6899999875446788887543
No 91
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.16 E-value=0.01 Score=59.93 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=49.4
Q ss_pred HHHhhhhCCCCcchHHHHHH--h--hcCCCEEEEEecCCcccCCC------CCCCccc-CChHHHHHHHHHHhc-CCEEE
Q 020285 42 KRAWIIRHPSALDMFHEITE--A--SKGKQIVMFLDYDGTLSPIV------ENPDRAF-MSGKMRRAVRQLAKY-FPTAI 109 (328)
Q Consensus 42 ~~~w~~~~~~al~~~~~~~~--~--~~~k~~li~~D~DGTL~~~~------~~p~~~~-is~~~~~aL~~L~~~-~~v~I 109 (328)
...|....+..-..|+.++- . .+.+.+++|||+||||.... .+|++-. +-|.+.++|++|.+. .+++|
T Consensus 139 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvI 218 (526)
T TIGR01663 139 PEKRDRKGNPGWENLEKLLIFTAAGVKGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICI 218 (526)
T ss_pred hhhhcccCCccccccCceEEEecCCcCccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEE
Confidence 45677654443344443222 1 25677999999999999632 2233322 468899999999998 58999
Q ss_pred EcCCCh
Q 020285 110 VTGRCR 115 (328)
Q Consensus 110 ~SGR~~ 115 (328)
+|..+.
T Consensus 219 vTNQ~g 224 (526)
T TIGR01663 219 FTNQGG 224 (526)
T ss_pred EECCcc
Confidence 997655
No 92
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.12 E-value=0.033 Score=61.13 Aligned_cols=69 Identities=19% Similarity=0.362 Sum_probs=49.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC---CCccceEEeCChh
Q 020285 228 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP---KKTSASYSLREPD 304 (328)
Q Consensus 228 ~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~---~~t~A~~~l~~~~ 304 (328)
+-.+.|. .|+.-++.+.+..|. .+.++||+.||.+|++.+ .+||.+.... ...+|+|++.+
T Consensus 748 ~aR~sP~---qK~~IV~~lk~~~~~------~vl~iGDG~ND~~mlk~A-----dVGIgi~g~eg~qA~~aaD~~i~~-- 811 (1057)
T TIGR01652 748 CCRVSPS---QKADVVRLVKKSTGK------TTLAIGDGANDVSMIQEA-----DVGVGISGKEGMQAVMASDFAIGQ-- 811 (1057)
T ss_pred EeCCCHH---HHHHHHHHHHhcCCC------eEEEEeCCCccHHHHhhc-----CeeeEecChHHHHHHHhhhhhhhh--
Confidence 3457788 799999988776442 589999999999999998 4677654322 23578999876
Q ss_pred HHHHHHHHHH
Q 020285 305 EVMDFLQKLV 314 (328)
Q Consensus 305 ~V~~~L~~l~ 314 (328)
.++|.+|+
T Consensus 812 --F~~L~~ll 819 (1057)
T TIGR01652 812 --FRFLTKLL 819 (1057)
T ss_pred --HHHHHHHH
Confidence 34444444
No 93
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.11 E-value=0.012 Score=54.50 Aligned_cols=70 Identities=24% Similarity=0.463 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCC--CC----CccceEEeCChhHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKF--PK----KTSASYSLREPDEVMDFL 310 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~--~~----~t~A~~~l~~~~~V~~~L 310 (328)
.|..++..+++.++++++ ++++|||+.+|+.+-+.+ |+ +|.+..+ +. ...|+|+++++.++..++
T Consensus 196 ~k~~~~~~~l~~~~~~p~---~~l~IGDs~~Di~aA~~A-----G~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 196 SKRRALSQLVAREGWQPA---AVMYVGDETRDVEAARQV-----GLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV 267 (273)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence 467889999999999876 799999999998887776 43 4455443 22 246899999999999998
Q ss_pred HHHHH
Q 020285 311 QKLVR 315 (328)
Q Consensus 311 ~~l~~ 315 (328)
..|+.
T Consensus 268 ~~~~~ 272 (273)
T PRK13225 268 TQLMR 272 (273)
T ss_pred HHHhc
Confidence 88764
No 94
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.07 E-value=0.0071 Score=53.57 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=45.5
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC-CccceE--EeCChhHHHHHHHH
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK-KTSASY--SLREPDEVMDFLQK 312 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~-~t~A~~--~l~~~~~V~~~L~~ 312 (328)
+..|...++.+. ..|. .++++||+.||++|++.+ |++|++.-.+. ...|.- ++.+.+++.+.|..
T Consensus 130 ~~~K~~~l~~l~-~~~~------~~v~vGDs~nDl~ml~~A-----g~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 130 KDPKRQSVIAFK-SLYY------RVIAAGDSYNDTTMLSEA-----HAGILFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred cchHHHHHHHHH-hhCC------CEEEEeCCHHHHHHHHhC-----CCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 347999999884 4442 599999999999999998 89999975432 223322 24567776665543
No 95
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.05 E-value=0.019 Score=50.72 Aligned_cols=67 Identities=18% Similarity=0.133 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCC--C----CccceEEeCChhHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--K----KTSASYSLREPDEVMDFL 310 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~--~----~t~A~~~l~~~~~V~~~L 310 (328)
-|...++++++.++++++ .+++|||+.+|+.+-+.+ |+ .|.+..+. . +..|+|+++++.++.+++
T Consensus 139 p~p~~~~~~~~~~~~~~~---~~~~iGDs~~Di~aa~~a-----G~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 139 PDPEPVLKALELLGAKPE---EALMVGDNHHDILAGKNA-----GTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred CCcHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 567889999999999876 899999999999988887 44 44454432 1 235889999999988877
Q ss_pred HH
Q 020285 311 QK 312 (328)
Q Consensus 311 ~~ 312 (328)
..
T Consensus 211 ~~ 212 (214)
T PRK13288 211 GD 212 (214)
T ss_pred hh
Confidence 54
No 96
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.03 E-value=0.0061 Score=52.00 Aligned_cols=48 Identities=25% Similarity=0.304 Sum_probs=35.1
Q ss_pred CEEEEEecCCcccCCCC------CCCcccCChHHHHHHHHHHhc-CCEEEEcCCC
Q 020285 67 QIVMFLDYDGTLSPIVE------NPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRC 114 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~------~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~ 114 (328)
++++|||.||||..... .++.-.+-+.+.++|++|.++ .+++|+|-.+
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~ 55 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQD 55 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCc
Confidence 46799999999987321 122334557889999999988 5889988653
No 97
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.02 E-value=0.0091 Score=50.22 Aligned_cols=57 Identities=30% Similarity=0.333 Sum_probs=38.5
Q ss_pred CCEEEEEecCCcccCCC----C--CCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 66 KQIVMFLDYDGTLSPIV----E--NPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~----~--~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
+-+++++|+||||+.-. + +.-+++ .-.-=..|+.|.+. .+++|+|||.-.-+++..+
T Consensus 7 ~IkLli~DVDGvLTDG~ly~~~~Gee~KaF-nv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLYYDENGEEIKAF-NVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred hceEEEEeccceeecCeEEEcCCCceeeee-eccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHH
Confidence 34889999999999721 0 000111 11112467888888 5999999999999988763
No 98
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.99 E-value=0.0094 Score=53.95 Aligned_cols=47 Identities=19% Similarity=0.197 Sum_probs=37.4
Q ss_pred EEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEc---CCChhhHHhhh
Q 020285 70 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVT---GRCRDKVYDFV 122 (328)
Q Consensus 70 i~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~S---GR~~~~v~~~~ 122 (328)
++||+||||+.. . .+-+.+.++|+.+.++ .++.++| ||+...+.+.+
T Consensus 1 ~lfD~DGvL~~~-----~-~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 1 FLFDIDGVLWLG-----H-KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred CEEeCcCccCcC-----C-ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 478999999983 2 3455899999999988 5899997 89998776543
No 99
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=95.99 E-value=0.013 Score=51.33 Aligned_cols=66 Identities=17% Similarity=0.178 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCC--C----CCccceEEeCChhHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKF--P----KKTSASYSLREPDEVMDFL 310 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~--~----~~t~A~~~l~~~~~V~~~L 310 (328)
-+...+..+++.+|++++ .+++|||+.+|+.+-+.+ |+ .|.+..+ . .+..|+|+++++.++..++
T Consensus 132 P~~~~~~~~~~~~~~~~~---~~l~igD~~~Di~aA~~~-----Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPE---DAVMVGDAVTDLASARAA-----GTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred CChHHHHHHHHHcCCChh---heEEEcCCHHHHHHHHHc-----CCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 367888999999999876 799999999998887776 55 3333322 2 1356899999999998776
Q ss_pred H
Q 020285 311 Q 311 (328)
Q Consensus 311 ~ 311 (328)
+
T Consensus 204 ~ 204 (205)
T TIGR01454 204 R 204 (205)
T ss_pred h
Confidence 4
No 100
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.98 E-value=0.01 Score=54.83 Aligned_cols=68 Identities=18% Similarity=0.196 Sum_probs=52.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCC--C----CccceEEeCChhHHHH
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--K----KTSASYSLREPDEVMD 308 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~--~----~t~A~~~l~~~~~V~~ 308 (328)
+-.+...++.+++.+|++++ .+++|||+.+|+.+-+.+ |+ ++.|..+. . ...++|+++++.++..
T Consensus 156 ~Kp~p~~~~~~~~~~g~~~~---~~l~IGD~~~Di~aA~~a-----Gi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 156 KKPDPAALLFVMKMAGVPPS---QSLFVGDSRSDVLAAKAA-----GVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred CCCCcHHHHHHHHHhCCChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 34567889999999999876 899999999999998886 54 45554431 1 2468899999998876
Q ss_pred HHH
Q 020285 309 FLQ 311 (328)
Q Consensus 309 ~L~ 311 (328)
++.
T Consensus 228 ~~~ 230 (272)
T PRK13223 228 GCA 230 (272)
T ss_pred HHh
Confidence 544
No 101
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.94 E-value=0.0072 Score=52.20 Aligned_cols=64 Identities=20% Similarity=0.163 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCCC-----Cccc--eEEeCChhHHHHHHH
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK-----KTSA--SYSLREPDEVMDFLQ 311 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~~-----~t~A--~~~l~~~~~V~~~L~ 311 (328)
-..+..+++.+|++++ ++++|||+.+|+.+-+.+ |+ .|.+..+.. ...+ ++++.+..++.++|.
T Consensus 106 p~~~~~~~~~l~~~~~---~~~~VgDs~~Di~~A~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLNIDLA---GSPMVGDSLRDLQAAAAA-----GVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcCCChh---hEEEEeCCHHHHHHHHHC-----CCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 4567788888999876 899999999998887776 43 455544321 1235 788888888777654
No 102
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.93 E-value=0.023 Score=48.29 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=47.4
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCcccc
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKLAEL 127 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~~~~ 127 (328)
..+-+++|+|.||+++. ....+|++++=+.++.+. ..++|+|--....+..+..-.++
T Consensus 27 Gikgvi~DlDNTLv~wd----~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 27 GIKGVILDLDNTLVPWD----NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCcEEEEeccCceeccc----CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 45679999999999984 346799999999999999 48999999888888877643333
No 103
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=95.84 E-value=0.013 Score=51.53 Aligned_cols=63 Identities=22% Similarity=0.234 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcC--CC----CCccceEEeCChhHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSK--FP----KKTSASYSLREPDEVMDF 309 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n--~~----~~t~A~~~l~~~~~V~~~ 309 (328)
+...+..+++.+|++++ .+++|||+.+|+.+-+.+ |+ .|.+.. .. ....|+|++.++.++..+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~~~igDs~~d~~aa~~a-----G~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQ---QMVYVGDSRVDIQAARAA-----GCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred ChHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHC-----CCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 46789999999999876 799999999999999887 54 344522 21 124688999999987654
No 104
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=95.82 E-value=0.01 Score=50.28 Aligned_cols=50 Identities=18% Similarity=0.145 Sum_probs=36.6
Q ss_pred EEEEecCCcccCCC------CCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhH
Q 020285 69 VMFLDYDGTLSPIV------ENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKV 118 (328)
Q Consensus 69 li~~D~DGTL~~~~------~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v 118 (328)
++++|+||||+... .--......+...+.++++++++ .++-+|+|+....
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa 57 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQA 57 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHH
Confidence 47899999999841 00011256778888889999885 8999999997543
No 105
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.80 E-value=0.017 Score=49.59 Aligned_cols=45 Identities=27% Similarity=0.365 Sum_probs=36.3
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-C--EEEEcC
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-P--TAIVTG 112 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~--v~I~SG 112 (328)
+..-+.++||.|.||++ |....++++..+.++++++.+ . |+|+|-
T Consensus 38 ~~Gik~li~DkDNTL~~----~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSN 85 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTP----PYEDEIPPEYAEWLNELKKQFGKDRVLIVSN 85 (168)
T ss_pred hcCceEEEEcCCCCCCC----CCcCcCCHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 44568899999999998 456789999999999999774 3 676664
No 106
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.78 E-value=0.015 Score=47.47 Aligned_cols=63 Identities=25% Similarity=0.333 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEE-cCC--CCC--ccceEEeCChhHHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILV-SKF--PKK--TSASYSLREPDEVMDFLQK 312 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v-~n~--~~~--t~A~~~l~~~~~V~~~L~~ 312 (328)
.|..-++.|-. +.+ .++++||+-||+.|++.+ .+||++ .+. +.+ ..|++++.++.++.+.+..
T Consensus 81 ~K~~ii~eLkk----~~~---k~vmVGnGaND~laLr~A-----DlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 81 MKAKIIRELKK----RYE---KVVMVGNGANDILALREA-----DLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred HHHHHHHHhcC----CCc---EEEEecCCcchHHHhhhc-----ccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 56555555433 333 899999999999999998 577755 332 223 5789999999988887654
No 107
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=95.78 E-value=0.019 Score=51.60 Aligned_cols=64 Identities=22% Similarity=0.159 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCC---C----CccceEEeCChhHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP---K----KTSASYSLREPDEVMDFL 310 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~---~----~t~A~~~l~~~~~V~~~L 310 (328)
+...+.++++.+|++++ ++++|||+.+|+.+-+.+ |+ .|.+.-+. . ...++|+++++.++.+.|
T Consensus 153 ~p~~~~~~~~~l~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 153 HPLPLLVAAERIGVAPT---DCVYVGDDERDILAARAA-----GMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred CHHHHHHHHHHhCCChh---hEEEeCCCHHHHHHHHHC-----CCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 45678999999999887 799999999999998887 54 34443221 1 135889999999887754
No 108
>PLN03190 aminophospholipid translocase; Provisional
Probab=95.65 E-value=0.16 Score=56.27 Aligned_cols=69 Identities=16% Similarity=0.270 Sum_probs=47.8
Q ss_pred EEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC---CCccceEEeCChhHH
Q 020285 230 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP---KKTSASYSLREPDEV 306 (328)
Q Consensus 230 EI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~---~~t~A~~~l~~~~~V 306 (328)
-+.|. .|+.-++.+.+..+ . .++++||+.||.+|++.+ .+||-++... ...+|+|.+..-
T Consensus 853 R~sP~---QKa~IV~~vk~~~~---~---vtlaIGDGaNDv~mIq~A-----dVGIGIsG~EG~qA~~aSDfaI~~F--- 915 (1178)
T PLN03190 853 RVAPL---QKAGIVALVKNRTS---D---MTLAIGDGANDVSMIQMA-----DVGVGISGQEGRQAVMASDFAMGQF--- 915 (1178)
T ss_pred cCCHH---HHHHHHHHHHhcCC---c---EEEEECCCcchHHHHHhc-----CeeeeecCchhHHHHHhhccchhhh---
Confidence 46687 79999888776532 1 589999999999999998 4666443221 125788888654
Q ss_pred HHHHHHHHHh
Q 020285 307 MDFLQKLVRW 316 (328)
Q Consensus 307 ~~~L~~l~~~ 316 (328)
++|.+|+-+
T Consensus 916 -r~L~rLLlv 924 (1178)
T PLN03190 916 -RFLVPLLLV 924 (1178)
T ss_pred -HHHHHHHHH
Confidence 456666543
No 109
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=95.62 E-value=0.059 Score=50.01 Aligned_cols=57 Identities=19% Similarity=0.398 Sum_probs=43.1
Q ss_pred CCEEEEEecCCcccCCCC-C----C-------CcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 66 KQIVMFLDYDGTLSPIVE-N----P-------DRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~-~----p-------~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
.+.-+++|+|-||+.+.. + | ....++++.++..++|.++ .|+=|-+..+.++-.+++
T Consensus 21 ~~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m 90 (277)
T TIGR01544 21 AKLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPYM 90 (277)
T ss_pred hheEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhHH
Confidence 566799999999998752 1 1 1456889999999999988 588888888877654443
No 110
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.62 E-value=0.015 Score=55.96 Aligned_cols=48 Identities=27% Similarity=0.371 Sum_probs=39.3
Q ss_pred CCEEEEEecCCcccCCC------CCCCcccCChHHHHHHHHHHhc-CCEEEEcCC
Q 020285 66 KQIVMFLDYDGTLSPIV------ENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGR 113 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~------~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR 113 (328)
+++++|+|.||||.... ..++...+-|.+.++|..|++. .+++|+|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 46889999999999842 2344567888999999999888 599999984
No 111
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.54 E-value=0.018 Score=60.13 Aligned_cols=70 Identities=20% Similarity=0.209 Sum_probs=55.7
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEe--CC
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--RE 302 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l--~~ 302 (328)
.+-|+.|. +|...++.|.+.- . .++++||+.||-|+|..+ ..||+||.+.+ .+.|+.++ +|
T Consensus 579 v~AellPe---dK~~~V~~l~~~g----~---~VamVGDGINDAPALA~A-----dVGiAmG~GtDvA~eaADvvL~~~d 643 (713)
T COG2217 579 VRAELLPE---DKAEIVRELQAEG----R---KVAMVGDGINDAPALAAA-----DVGIAMGSGTDVAIEAADVVLMRDD 643 (713)
T ss_pred heccCCcH---HHHHHHHHHHhcC----C---EEEEEeCCchhHHHHhhc-----CeeEeecCCcHHHHHhCCEEEecCC
Confidence 35678898 7999999998542 2 699999999999999998 69999999764 36788887 46
Q ss_pred hhHHHHHHH
Q 020285 303 PDEVMDFLQ 311 (328)
Q Consensus 303 ~~~V~~~L~ 311 (328)
...|.+.++
T Consensus 644 L~~v~~ai~ 652 (713)
T COG2217 644 LSAVPEAID 652 (713)
T ss_pred HHHHHHHHH
Confidence 777766654
No 112
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.51 E-value=0.027 Score=48.70 Aligned_cols=57 Identities=18% Similarity=0.174 Sum_probs=42.6
Q ss_pred EEEEEecCCcccCCCC-----------CC----------CcccCChHHHHHHHHHHhcC-CEEEEcCC-ChhhHHhhhCc
Q 020285 68 IVMFLDYDGTLSPIVE-----------NP----------DRAFMSGKMRRAVRQLAKYF-PTAIVTGR-CRDKVYDFVKL 124 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~-----------~p----------~~~~is~~~~~aL~~L~~~~-~v~I~SGR-~~~~v~~~~~~ 124 (328)
+|++||+|+||..+.. ++ ....+-|.+.++|+.|.+++ +++|+|+. +...+..++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~ 82 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT 82 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence 6899999999997521 11 12346688999999999884 89999988 77777666543
No 113
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.49 E-value=0.016 Score=48.75 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=40.9
Q ss_pred EEEEEecCCcccCCCCCCC--------------cccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhC
Q 020285 68 IVMFLDYDGTLSPIVENPD--------------RAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~--------------~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 123 (328)
+++++|+||||+.....+. .-..-|.+.+.|+.+++.+.++|.|..+...+...+.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~ 70 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLD 70 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHH
Confidence 5789999999998654321 1236788999999998889999999999988887764
No 114
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.48 E-value=0.022 Score=51.41 Aligned_cols=54 Identities=13% Similarity=0.131 Sum_probs=41.2
Q ss_pred cCCCEEEEEecCCcccCCC---------C---C---------CCcccCChHHHHHHHHHHhc-CCEEEEcCCChhh
Q 020285 64 KGKQIVMFLDYDGTLSPIV---------E---N---------PDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDK 117 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~---------~---~---------p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~ 117 (328)
..++-+++||+|.|++... . + ...+..-|.++++++.+.+. +.|+++|||+...
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 4467889999999998731 0 0 12455667899999999998 5899999999755
No 115
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.38 E-value=0.025 Score=51.28 Aligned_cols=45 Identities=16% Similarity=0.090 Sum_probs=36.5
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhh
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 117 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~ 117 (328)
..+++||+||||... ..+-|.+.++|++|++.+ +++|+|..++..
T Consensus 8 ~~~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNI 53 (242)
T ss_pred CCEEEEecccccccC------CccCccHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 357899999999973 246789999999999985 899998776654
No 116
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=95.37 E-value=0.03 Score=49.99 Aligned_cols=68 Identities=22% Similarity=0.246 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC-C---CccceEEeCChhHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP-K---KTSASYSLREPDEVMDFLQ 311 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~-~---~t~A~~~l~~~~~V~~~L~ 311 (328)
.-..+..+++.+|+.++ .++++||+.+|+.|=+.+.- ...+|..+... . ...|++++.++.++..+|.
T Consensus 147 ~P~~l~~~~~~~~~~~~---~~l~VGDs~~Di~aA~~Ag~--~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDPE---EALMVGDSLNDILAAKAAGV--PAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCChh---heEEECCCHHHHHHHHHcCC--CEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 35678899999999854 79999999999999988720 12445555321 1 2469999999999888775
No 117
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.26 E-value=0.022 Score=51.61 Aligned_cols=78 Identities=32% Similarity=0.461 Sum_probs=49.2
Q ss_pred cCCCCCHHHHHHHHHHHc---CCCCCCCceEEEEeCCcCCHHHHHHHHhCC-----CceEE--EEcCCCCCccceEEe-C
Q 020285 233 PKIEWDKGKALEFLLECL---GFADCSNVFPVYIGDDTTDEDAFKILRKRE-----QGFGI--LVSKFPKKTSASYSL-R 301 (328)
Q Consensus 233 p~~~~~KG~al~~Ll~~l---g~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~-----~g~~v--~v~n~~~~t~A~~~l-~ 301 (328)
|. +.-||..++.+++.. |...+ .++|+||+.||.-.-..++... .||++ .+.+.+....|+.+. .
T Consensus 146 ~~-NmCK~~il~~~~~~~~~~g~~~~---rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~ 221 (234)
T PF06888_consen 146 PP-NMCKGKILERLLQEQAQRGVPYD---RVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWS 221 (234)
T ss_pred CC-ccchHHHHHHHHHHHhhcCCCcc---eEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecC
Confidence 56 779999999999884 44433 8999999999987766564321 12211 011111123454433 5
Q ss_pred ChhHHHHHHHHHH
Q 020285 302 EPDEVMDFLQKLV 314 (328)
Q Consensus 302 ~~~~V~~~L~~l~ 314 (328)
+-.++.+.|..|+
T Consensus 222 ~g~~i~~~l~~~i 234 (234)
T PF06888_consen 222 SGEEILEILLQLI 234 (234)
T ss_pred CHHHHHHHHHhhC
Confidence 7788888887763
No 118
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=95.22 E-value=0.045 Score=40.12 Aligned_cols=58 Identities=29% Similarity=0.233 Sum_probs=43.5
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHHHhCCCceEEEEcCCC--C------CccceEEeCChhH
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGFGILVSKFP--K------KTSASYSLREPDE 305 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~~~~~~g~~v~v~n~~--~------~t~A~~~l~~~~~ 305 (328)
..++.+++.++++++ .+++|||+ .+|+.+=+.+. -.+|.|..+. . +..++|++++..+
T Consensus 8 ~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~a~~~G----~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 8 GMLEQALKRLGVDPS---RCVMVGDSLETDIEAAKAAG----IDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHHHHHTSGGG---GEEEEESSTTTHHHHHHHTT----SEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHHHHHcCCCHH---HEEEEcCCcHhHHHHHHHcC----CcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 456788888998876 79999999 99998888762 3578887653 1 1367888877654
No 119
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=95.10 E-value=0.032 Score=48.77 Aligned_cols=32 Identities=9% Similarity=0.024 Sum_probs=25.8
Q ss_pred ChHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 020285 91 SGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 91 s~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 122 (328)
-|.+.+.|+.|.+..+++|+||.....+..++
T Consensus 70 ~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l 101 (205)
T PRK13582 70 LPGAVEFLDWLRERFQVVILSDTFYEFAGPLM 101 (205)
T ss_pred CCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHH
Confidence 35567888888777889999999999888765
No 120
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=95.06 E-value=0.031 Score=49.77 Aligned_cols=68 Identities=19% Similarity=0.095 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCC----CCCccceEEeCChhHHHHHHHH
Q 020285 237 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKF----PKKTSASYSLREPDEVMDFLQK 312 (328)
Q Consensus 237 ~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~----~~~t~A~~~l~~~~~V~~~L~~ 312 (328)
..|..+++. ++.... .+++|||+.+|+.|.+.+ |+.++-+.. .....+.+...+..+|.+.|+.
T Consensus 147 ~~K~~~l~~----~~~~~~---~~i~iGDs~~Di~aa~~A-----g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~ 214 (219)
T PRK09552 147 CCKPSLIRK----LSDTND---FHIVIGDSITDLEAAKQA-----DKVFARDFLITKCEELGIPYTPFETFHDVQTELKH 214 (219)
T ss_pred CchHHHHHH----hccCCC---CEEEEeCCHHHHHHHHHC-----CcceeHHHHHHHHHHcCCCccccCCHHHHHHHHHH
Confidence 458876655 445544 799999999999998876 664442110 0123455667889999999988
Q ss_pred HHHh
Q 020285 313 LVRW 316 (328)
Q Consensus 313 l~~~ 316 (328)
+.+.
T Consensus 215 ~~~~ 218 (219)
T PRK09552 215 LLEV 218 (219)
T ss_pred Hhcc
Confidence 8754
No 121
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.05 E-value=0.031 Score=58.23 Aligned_cols=68 Identities=19% Similarity=0.273 Sum_probs=53.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--Ch
Q 020285 228 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EP 303 (328)
Q Consensus 228 ~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~ 303 (328)
+-++.|. +|-.-++.+.+. | + .+.++||+.||-++|+.+ ..||+|+++.+ ++.|+.++- ++
T Consensus 488 ~A~~~Pe---dK~~iV~~lQ~~-G---~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~~ 552 (679)
T PRK01122 488 LAEATPE---DKLALIRQEQAE-G---R---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAGNMVDLDSNP 552 (679)
T ss_pred EccCCHH---HHHHHHHHHHHc-C---C---eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 4566787 799999988764 2 2 589999999999999998 79999998764 578898874 56
Q ss_pred hHHHHHH
Q 020285 304 DEVMDFL 310 (328)
Q Consensus 304 ~~V~~~L 310 (328)
..+.+.+
T Consensus 553 s~Iv~av 559 (679)
T PRK01122 553 TKLIEVV 559 (679)
T ss_pred HHHHHHH
Confidence 6655544
No 122
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.02 E-value=0.034 Score=47.82 Aligned_cols=57 Identities=19% Similarity=0.163 Sum_probs=42.3
Q ss_pred CEEEEEecCCcccCC---CC--CCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 67 QIVMFLDYDGTLSPI---VE--NPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 67 ~~li~~D~DGTL~~~---~~--~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
-++++||+||||+.- .. .......+.+--.+++.|++. .+++|+|+++...+...+.
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~ 69 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRAE 69 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHHH
Confidence 488999999999984 11 011223455556789999888 5999999999998888764
No 123
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=94.89 E-value=0.026 Score=50.29 Aligned_cols=15 Identities=40% Similarity=0.775 Sum_probs=13.0
Q ss_pred CEEEEEecCCcccCC
Q 020285 67 QIVMFLDYDGTLSPI 81 (328)
Q Consensus 67 ~~li~~D~DGTL~~~ 81 (328)
+++++||+||||+..
T Consensus 3 ~~~vifDfDgTi~~~ 17 (219)
T PRK09552 3 SIQIFCDFDGTITNN 17 (219)
T ss_pred CcEEEEcCCCCCCcc
Confidence 568999999999983
No 124
>PTZ00445 p36-lilke protein; Provisional
Probab=94.87 E-value=0.053 Score=48.11 Aligned_cols=66 Identities=15% Similarity=0.183 Sum_probs=47.4
Q ss_pred CCCCcchHHHHHHhh-cCCCEEEEEecCCcccC-----CCCCCC------cccCChHHHHHHHHHHhc-CCEEEEcCCCh
Q 020285 49 HPSALDMFHEITEAS-KGKQIVMFLDYDGTLSP-----IVENPD------RAFMSGKMRRAVRQLAKY-FPTAIVTGRCR 115 (328)
Q Consensus 49 ~~~al~~~~~~~~~~-~~k~~li~~D~DGTL~~-----~~~~p~------~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 115 (328)
|-+....-+.++... +-+-++|++|+|-||+. .- +|+ -..++|+.+..+.+|.+. ++|+|+|=-+.
T Consensus 24 ~~~~~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~-~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 24 HLNPHESADKFVDLLNECGIKVIASDFDLTMITKHSGGYI-DPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred cCCHHHHHHHHHHHHHHcCCeEEEecchhhhhhhhccccc-CCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 334455555666666 55779999999999998 32 121 123789999999999887 69999995543
No 125
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.87 E-value=0.035 Score=60.84 Aligned_cols=66 Identities=21% Similarity=0.338 Sum_probs=49.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEc-CCCC--CccceEEeCC--
Q 020285 228 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS-KFPK--KTSASYSLRE-- 302 (328)
Q Consensus 228 ~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~-n~~~--~t~A~~~l~~-- 302 (328)
+-.+.|. +|..-|+.+.+. | + .+.++||+.||.+|++.+ .+||+|| ++.. +..|++++.+
T Consensus 726 ~ar~sP~---~K~~iV~~lq~~-g---~---~Vam~GDGvNDapaLk~A-----dVGIAmg~~gt~vak~aADivl~dd~ 790 (1053)
T TIGR01523 726 IARCAPQ---TKVKMIEALHRR-K---A---FCAMTGDGVNDSPSLKMA-----NVGIAMGINGSDVAKDASDIVLSDDN 790 (1053)
T ss_pred EEecCHH---HHHHHHHHHHhc-C---C---eeEEeCCCcchHHHHHhC-----CccEecCCCccHHHHHhcCEEEecCC
Confidence 3456676 799999888764 2 2 588999999999999998 7999998 4443 4689999854
Q ss_pred hhHHHH
Q 020285 303 PDEVMD 308 (328)
Q Consensus 303 ~~~V~~ 308 (328)
...+..
T Consensus 791 f~~I~~ 796 (1053)
T TIGR01523 791 FASILN 796 (1053)
T ss_pred HHHHHH
Confidence 344443
No 126
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.83 E-value=0.054 Score=58.23 Aligned_cols=60 Identities=22% Similarity=0.370 Sum_probs=48.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR 301 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~ 301 (328)
.+-.+.|. +|..-++.+.+. | + .+.++||+.||.++++.+ ..||+|+++.+ +..|+.++-
T Consensus 582 vfAr~~Pe---~K~~iV~~lq~~-G---~---vVam~GDGvNDapALk~A-----dVGIAmg~gtdvAk~aADiVLl 643 (867)
T TIGR01524 582 IFARLTPM---QKSRIIGLLKKA-G---H---TVGFLGDGINDAPALRKA-----DVGISVDTAADIAKEASDIILL 643 (867)
T ss_pred EEEECCHH---HHHHHHHHHHhC-C---C---EEEEECCCcccHHHHHhC-----CEEEEeCCccHHHHHhCCEEEe
Confidence 44557787 799999988654 3 2 588999999999999998 79999997654 578999884
No 127
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=94.80 E-value=0.055 Score=47.82 Aligned_cols=33 Identities=12% Similarity=0.185 Sum_probs=22.7
Q ss_pred CChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 90 MSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 90 is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
+.+.+.+.|+.|++. .+++|+||.....+..++
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l 119 (219)
T TIGR00338 86 LTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK 119 (219)
T ss_pred cCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 455677777777776 478888887766665544
No 128
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=94.77 E-value=0.033 Score=57.94 Aligned_cols=68 Identities=24% Similarity=0.296 Sum_probs=52.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC--Ch
Q 020285 228 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EP 303 (328)
Q Consensus 228 ~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~--~~ 303 (328)
+-++.|. +|-..++.+.+. | + .+.+.||+.||-++|+.+ ..||+|+++.+ +..|+.++- ++
T Consensus 484 ~A~~~Pe---dK~~iV~~lQ~~-G---~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~l 548 (673)
T PRK14010 484 VAECKPE---DKINVIREEQAK-G---H---IVAMTGDGTNDAPALAEA-----NVGLAMNSGTMSAKEAANLIDLDSNP 548 (673)
T ss_pred EcCCCHH---HHHHHHHHHHhC-C---C---EEEEECCChhhHHHHHhC-----CEEEEeCCCCHHHHHhCCEEEcCCCH
Confidence 4567787 799999887654 2 2 588999999999999998 79999998764 578999884 45
Q ss_pred hHHHHHH
Q 020285 304 DEVMDFL 310 (328)
Q Consensus 304 ~~V~~~L 310 (328)
..+.+.+
T Consensus 549 s~Iv~av 555 (673)
T PRK14010 549 TKLMEVV 555 (673)
T ss_pred HHHHHHH
Confidence 5555444
No 129
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=94.74 E-value=0.072 Score=45.18 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=46.6
Q ss_pred cCCCEEEEEecCCcccCCCCCCCc------------------------------ccCChHHHHHHHHHHhcCCEEEEcCC
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDR------------------------------AFMSGKMRRAVRQLAKYFPTAIVTGR 113 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~------------------------------~~is~~~~~aL~~L~~~~~v~I~SGR 113 (328)
..+|..+++|+|.||+.....|.. ..+-|.+.+.|++|++...++|+|..
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 467888999999999985433210 11357889999999977899999999
Q ss_pred ChhhHHhhhC
Q 020285 114 CRDKVYDFVK 123 (328)
Q Consensus 114 ~~~~v~~~~~ 123 (328)
+...+...+.
T Consensus 83 ~~~yA~~vl~ 92 (156)
T TIGR02250 83 TRAYAQAIAK 92 (156)
T ss_pred cHHHHHHHHH
Confidence 9998887764
No 130
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=94.59 E-value=0.099 Score=46.43 Aligned_cols=62 Identities=18% Similarity=0.028 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCCC-----CccceEEeCChhHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK-----KTSASYSLREPDEVM 307 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~~-----~t~A~~~l~~~~~V~ 307 (328)
.+...++.+++.+|++++ ++++|||+.+|+++-+.+ |. .|.+..... ...|++++.+..++.
T Consensus 149 p~~~~~~~~~~~~~~~~~---~~~~igDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPL---TCVALEDSFNGMIAAKAA-----RMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CCHHHHHHHHHHcCCCHH---HeEEEcCChhhHHHHHHc-----CCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 456789999999999887 899999999999999887 54 455544321 135777777777653
No 131
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=94.56 E-value=0.058 Score=47.51 Aligned_cols=59 Identities=12% Similarity=0.071 Sum_probs=45.9
Q ss_pred cCCCEEEEEecCCcccCCCC--CCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 020285 64 KGKQIVMFLDYDGTLSPIVE--NPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~--~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 122 (328)
...++++++|+|+||+.+.. .+..-..-|.+.+-|+.+.+.+.|+|=|..+...+...+
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l 78 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKM 78 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHH
Confidence 44568899999999997531 112245778899999999999999999998888777654
No 132
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=94.55 E-value=0.13 Score=47.23 Aligned_cols=68 Identities=12% Similarity=-0.044 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHcCCC-CCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCCC------------------------
Q 020285 239 KGKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK------------------------ 292 (328)
Q Consensus 239 KG~al~~Ll~~lg~~-~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~~------------------------ 292 (328)
+...+..+++.+|+. ++ .+++|||+.+|+.+=+.+ |+ .|.|..+..
T Consensus 160 ~p~~~~~a~~~l~~~~~~---e~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T PRK13478 160 YPWMALKNAIELGVYDVA---ACVKVDDTVPGIEEGLNA-----GMWTVGVILSGNELGLSEEEYQALSAAELAARRERA 231 (267)
T ss_pred ChHHHHHHHHHcCCCCCc---ceEEEcCcHHHHHHHHHC-----CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHH
Confidence 356788999999986 35 799999999998776665 43 455543321
Q ss_pred -----CccceEEeCChhHHHHHHHHHH
Q 020285 293 -----KTSASYSLREPDEVMDFLQKLV 314 (328)
Q Consensus 293 -----~t~A~~~l~~~~~V~~~L~~l~ 314 (328)
+..|+++++++.++..+|+.+.
T Consensus 232 ~~~l~~~~a~~vi~~~~~l~~~l~~~~ 258 (267)
T PRK13478 232 RARLRAAGAHYVIDTIADLPAVIADIE 258 (267)
T ss_pred HHHHHHcCCCeehhhHHHHHHHHHHHH
Confidence 2458899999999999887544
No 133
>PLN02954 phosphoserine phosphatase
Probab=94.50 E-value=0.065 Score=47.54 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=25.7
Q ss_pred CChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 90 MSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 90 is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
+-|.+.+.|+.|+++ .+++|+||.....+..++
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l 118 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVA 118 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 446777788888777 489999999988877754
No 134
>PRK08238 hypothetical protein; Validated
Probab=94.46 E-value=0.091 Score=52.63 Aligned_cols=47 Identities=9% Similarity=-0.141 Sum_probs=34.9
Q ss_pred cCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhhCccc--ceEecCCCc
Q 020285 89 FMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKLAE--LYYAGSHGM 135 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~~~~~--~~~i~~nG~ 135 (328)
.+.+++.+.|+++++++ +++|+|+.+...++.+....+ ..++|+++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~~ 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGVFASDGT 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCCc
Confidence 35689999999999885 899999999988887653221 245666554
No 135
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.40 E-value=0.08 Score=50.14 Aligned_cols=57 Identities=23% Similarity=0.213 Sum_probs=44.3
Q ss_pred CEEEEEecCCcccCCC--CC-CC---cccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhhC
Q 020285 67 QIVMFLDYDGTLSPIV--EN-PD---RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~--~~-p~---~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~~ 123 (328)
+++|++|+|+||...+ ++ +. .....+.+.++|+.|.+.+ .++|||..+...+...+.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Confidence 5889999999999864 21 11 1123478999999999885 899999999998887663
No 136
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.35 E-value=0.056 Score=59.02 Aligned_cols=60 Identities=22% Similarity=0.229 Sum_probs=46.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCC-CC--CccceEEeCC
Q 020285 228 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKF-PK--KTSASYSLRE 302 (328)
Q Consensus 228 ~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~-~~--~t~A~~~l~~ 302 (328)
+-.+.|. +|..-++.+.+ .|. -+.++||+.||.+||+.+ .+||+||++ .. +.+|++++.|
T Consensus 664 faR~sPe---qK~~IV~~lq~-~g~------vv~~~GDG~ND~paLk~A-----dVGiamg~~G~~vak~aADivL~d 726 (997)
T TIGR01106 664 FARTSPQ---QKLIIVEGCQR-QGA------IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILLD 726 (997)
T ss_pred EEECCHH---HHHHHHHHHHH-CCC------EEEEECCCcccHHHHhhC-----CcceecCCcccHHHHHhhceEEec
Confidence 3445566 78888888764 332 589999999999999998 699999964 32 4788999865
No 137
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=94.33 E-value=0.06 Score=47.74 Aligned_cols=66 Identities=18% Similarity=0.145 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCC-C---CCccceEEeCChhHHHHHHHH
Q 020285 237 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKF-P---KKTSASYSLREPDEVMDFLQK 312 (328)
Q Consensus 237 ~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~-~---~~t~A~~~l~~~~~V~~~L~~ 312 (328)
..|..+++.+.. ..+ .+++|||+.||..|.+.+ |+.++-+.- . ....+.+...+-.+|.++|++
T Consensus 143 ~~K~~~l~~~~~----~~~---~~i~iGDg~~D~~~a~~A-----d~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 143 CCKPSLIRKLSE----PND---YHIVIGDSVTDVEAAKQS-----DLCFARDYLLNECEELGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred CCHHHHHHHHhh----cCC---cEEEEeCCHHHHHHHHhC-----CeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence 468888887643 333 699999999999999886 675554321 1 112233345778888888876
Q ss_pred HH
Q 020285 313 LV 314 (328)
Q Consensus 313 l~ 314 (328)
..
T Consensus 211 ~~ 212 (214)
T TIGR03333 211 VK 212 (214)
T ss_pred Hh
Confidence 54
No 138
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=94.32 E-value=0.053 Score=58.85 Aligned_cols=61 Identities=23% Similarity=0.292 Sum_probs=48.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEc-CCCC--CccceEEeCC
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS-KFPK--KTSASYSLRE 302 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~-n~~~--~t~A~~~l~~ 302 (328)
-+-.+.|. +|..-|+.|.+. |. .+.++||+.||.+|++.+ ..||+|+ ++.+ +..|++++.+
T Consensus 648 Vfar~sPe---~K~~iV~~lq~~-g~------vVam~GDGvNDapALk~A-----dVGIAmg~~gtdvAk~aADivL~d 711 (941)
T TIGR01517 648 VLARSSPL---DKQLLVLMLKDM-GE------VVAVTGDGTNDAPALKLA-----DVGFSMGISGTEVAKEASDIILLD 711 (941)
T ss_pred EEEECCHH---HHHHHHHHHHHC-CC------EEEEECCCCchHHHHHhC-----CcceecCCCccHHHHHhCCEEEec
Confidence 34567787 799999998763 22 589999999999999998 6999999 5543 4688999864
No 139
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=94.22 E-value=0.085 Score=55.89 Aligned_cols=61 Identities=28% Similarity=0.345 Sum_probs=48.9
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCC
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLRE 302 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~~ 302 (328)
.+-++.|. +|..-++.+.+. | + -+.++||+.||-++|+.+ ..||+|+++.+ +..|+.++-+
T Consensus 514 vfAr~~Pe---~K~~iV~~lq~~-G---~---~VamvGDGvNDapAL~~A-----dVGIAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 514 GFAEVFPE---HKYEIVEILQKR-G---H---LVGMTGDGVNDAPALKKA-----DVGIAVAGATDAARSAADIVLTE 576 (755)
T ss_pred EEEecCHH---HHHHHHHHHHhc-C---C---EEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHHhCCEEEEc
Confidence 45667887 799999887653 3 2 599999999999999998 69999998764 5789988743
No 140
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=94.21 E-value=0.09 Score=56.79 Aligned_cols=61 Identities=26% Similarity=0.329 Sum_probs=50.1
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeC
Q 020285 226 RMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR 301 (328)
Q Consensus 226 ~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~ 301 (328)
..+-.+.|. +|..-|+.|.+. | + -+.++||+.||-++|+.+ ..||+|+++.+ +..|+.++-
T Consensus 616 ~VfAr~sPe---~K~~iV~~Lq~~-G---~---vVamtGDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLl 678 (903)
T PRK15122 616 TVFAKLTPL---QKSRVLKALQAN-G---H---TVGFLGDGINDAPALRDA-----DVGISVDSGADIAKESADIILL 678 (903)
T ss_pred CEEEEeCHH---HHHHHHHHHHhC-C---C---EEEEECCCchhHHHHHhC-----CEEEEeCcccHHHHHhcCEEEe
Confidence 456678888 799999998764 3 2 588999999999999998 69999997654 578999884
No 141
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=94.19 E-value=0.094 Score=44.65 Aligned_cols=57 Identities=16% Similarity=0.239 Sum_probs=43.2
Q ss_pred CEEEEEecCCcccCCCCCCCc-------------------ccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhC
Q 020285 67 QIVMFLDYDGTLSPIVENPDR-------------------AFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~-------------------~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 123 (328)
|..+++|+|+||+.....|.. -+.-|.+.+.|+.|++...++|.|.-+...+..++.
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~ 76 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLD 76 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHH
Confidence 356899999999976544321 035678889999998888899998888887777664
No 142
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.18 E-value=0.087 Score=56.88 Aligned_cols=62 Identities=23% Similarity=0.360 Sum_probs=49.9
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCC
Q 020285 226 RMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLRE 302 (328)
Q Consensus 226 ~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~~ 302 (328)
..+-.+.|. +|-.-|+.|.+. |. -+.++||+.||-++++.+ ..||+|+++.+ +..|+.++-+
T Consensus 616 ~VfAr~sPe---~K~~IV~~Lq~~-G~------vVam~GDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLld 679 (902)
T PRK10517 616 TLFARLTPM---HKERIVTLLKRE-GH------VVGFMGDGINDAPALRAA-----DIGISVDGAVDIAREAADIILLE 679 (902)
T ss_pred cEEEEcCHH---HHHHHHHHHHHC-CC------EEEEECCCcchHHHHHhC-----CEEEEeCCcCHHHHHhCCEEEec
Confidence 345667787 799999988753 32 588999999999999998 69999998764 5789998843
No 143
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.17 E-value=0.13 Score=44.19 Aligned_cols=48 Identities=21% Similarity=0.324 Sum_probs=36.2
Q ss_pred CEEEEEecCCcccCCCC----CCCcccCChHHHHHHHHHHhc-CCEEEEcCCC
Q 020285 67 QIVMFLDYDGTLSPIVE----NPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRC 114 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~----~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~ 114 (328)
.++++||.||||..... .+....+-+.+.++|++|++. .+++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999999976431 122334667889999999988 5899999875
No 144
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=94.14 E-value=0.025 Score=51.07 Aligned_cols=53 Identities=17% Similarity=0.094 Sum_probs=38.9
Q ss_pred CCCEEEEEecCCcccCCCC------------CC---------CcccCChHHHHHHHHHHhcC-CEEEEcCCChhh
Q 020285 65 GKQIVMFLDYDGTLSPIVE------------NP---------DRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 117 (328)
Q Consensus 65 ~k~~li~~D~DGTL~~~~~------------~p---------~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~ 117 (328)
.++.+++||+|+|++.... ++ ..+..-|.+++.++.+.+.+ .|+++|||+...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchh
Confidence 6788999999999875100 01 12234456889999999995 999999999773
No 145
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=94.09 E-value=0.066 Score=47.77 Aligned_cols=35 Identities=14% Similarity=0.019 Sum_probs=29.3
Q ss_pred ccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhh
Q 020285 88 AFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 88 ~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~ 122 (328)
..+.|..++.++.+++.+ +++|+||-....+.++.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia 111 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA 111 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH
Confidence 467888999999999994 99999999987777654
No 146
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=93.97 E-value=0.069 Score=45.82 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=27.1
Q ss_pred CHHHHHHHH---HHHcCCCCCCCceEEEEeCCcCCHHHHH
Q 020285 238 DKGKALEFL---LECLGFADCSNVFPVYIGDDTTDEDAFK 274 (328)
Q Consensus 238 ~KG~al~~L---l~~lg~~~~~~~~~i~~GD~~nD~~Mf~ 274 (328)
+|..+++.+ ... +.... .++++||+.||.+||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~---~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPD---RVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCC---EEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCC---eEEEEECCHHHHHHhC
Confidence 499999999 443 55544 7999999999999986
No 147
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=93.93 E-value=0.12 Score=44.11 Aligned_cols=37 Identities=35% Similarity=0.321 Sum_probs=30.5
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 233 PKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 233 p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
+. |..|+..++.+++.. ++ .++++||+.||+.|.+.+
T Consensus 145 ~~-g~~K~~~~~~~~~~~---~~---~~i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 145 PC-GCCKGKVIHKLSEPK---YQ---HIIYIGDGVTDVCPAKLS 181 (188)
T ss_pred CC-CCCHHHHHHHHHhhc---Cc---eEEEECCCcchhchHhcC
Confidence 45 778999999998775 23 799999999999987765
No 148
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=93.59 E-value=0.13 Score=48.71 Aligned_cols=45 Identities=22% Similarity=0.155 Sum_probs=33.7
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc----C-CEEEEc---CCChhhHH
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY----F-PTAIVT---GRCRDKVY 119 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~----~-~v~I~S---GR~~~~v~ 119 (328)
.++||+||||... ..+-+...++|+.|... + ++.++| |++...+.
T Consensus 2 ~~ifD~DGvL~~g------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~ 54 (321)
T TIGR01456 2 GFAFDIDGVLFRG------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARA 54 (321)
T ss_pred EEEEeCcCceECC------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHH
Confidence 5889999999972 24578899999999985 4 777665 66665533
No 149
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=93.56 E-value=0.093 Score=48.53 Aligned_cols=43 Identities=19% Similarity=0.142 Sum_probs=33.9
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCCh
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCR 115 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 115 (328)
...++||+||||..- ...=|...++|++|+++ .+++++|-.+.
T Consensus 8 y~~~l~DlDGvl~~G------~~~ipga~e~l~~L~~~g~~~iflTNn~~ 51 (269)
T COG0647 8 YDGFLFDLDGVLYRG------NEAIPGAAEALKRLKAAGKPVIFLTNNST 51 (269)
T ss_pred cCEEEEcCcCceEeC------CccCchHHHHHHHHHHcCCeEEEEeCCCC
Confidence 466999999999972 34557899999999999 48888864443
No 150
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.54 E-value=0.43 Score=48.00 Aligned_cols=50 Identities=28% Similarity=0.353 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLRE 302 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~~ 302 (328)
+|...++.+.+. | . .+.++||+.||.+|++.+ .+||+|+ -...|++++-+
T Consensus 394 ~K~~~v~~l~~~-g---~---~v~~vGDg~nD~~al~~A-----dvgia~~---a~~~adivl~~ 443 (499)
T TIGR01494 394 EKAALVEALQKK-G---R---VVAMTGDGVNDAPALKKA-----DVGIAMG---AKAAADIVLLD 443 (499)
T ss_pred HHHHHHHHHHHC-C---C---EEEEECCChhhHHHHHhC-----CCccccc---hHHhCCeEEec
Confidence 455666655332 2 2 699999999999999987 6888887 24568888753
No 151
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=93.48 E-value=0.69 Score=39.78 Aligned_cols=39 Identities=15% Similarity=0.123 Sum_probs=27.9
Q ss_pred EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCc
Q 020285 223 RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDT 267 (328)
Q Consensus 223 ~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~ 267 (328)
...-.++||-|. +|-.=++.|.+..|++.+ ++++|=|..
T Consensus 96 ~~~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~---eMlFFDDe~ 134 (169)
T PF12689_consen 96 IEYFDYLEIYPG---SKTTHFRRIHRKTGIPYE---EMLFFDDES 134 (169)
T ss_dssp -CCECEEEESSS----HHHHHHHHHHHH---GG---GEEEEES-H
T ss_pred hhhcchhheecC---chHHHHHHHHHhcCCChh---HEEEecCch
Confidence 344456999996 899999999999999876 799998863
No 152
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=93.37 E-value=0.1 Score=46.18 Aligned_cols=35 Identities=11% Similarity=0.028 Sum_probs=28.6
Q ss_pred cCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhC
Q 020285 89 FMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 123 (328)
.+.|...+.|+.+++..+++|+||-....+..++.
T Consensus 68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~ 102 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMR 102 (203)
T ss_pred CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHH
Confidence 46777888888888777999999999988877653
No 153
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=93.37 E-value=0.067 Score=54.81 Aligned_cols=62 Identities=24% Similarity=0.324 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCC--ccceEEeCChhHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSASYSLREPDEVMDF 309 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~--t~A~~~l~~~~~V~~~ 309 (328)
-|+..++.|.++-|. .+.||||+.||..|.+.++ .|+||. |+..+. -+|+|++....-|.+.
T Consensus 768 QKA~v~~llq~~t~k------rvc~IGDGGNDVsMIq~A~---~GiGI~-gkEGkQASLAADfSItqF~Hv~rL 831 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGK------RVCAIGDGGNDVSMIQAAD---VGIGIV-GKEGKQASLAADFSITQFSHVSRL 831 (1051)
T ss_pred HHHHHHHHHHHhhCc------eEEEEcCCCccchheeecc---cceeee-cccccccchhccccHHHHHHHHHH
Confidence 699998888888773 5899999999999999985 377764 544433 4788988655555443
No 154
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=93.32 E-value=0.062 Score=46.79 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=28.3
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 242 ALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 242 al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
.+..+++.+++++. .++++||+.||.+|++.+
T Consensus 183 ~~~~~i~~l~~~~~---~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 183 IFLRIIKELQVKPG---EVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp HHHHHHHHHTCTGG---GEEEEESSGGHHHHHHHS
T ss_pred hHHHHHHHHhcCCC---EEEEEccCHHHHHHHHhC
Confidence 67888888998776 799999999999999976
No 155
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=93.26 E-value=0.19 Score=43.52 Aligned_cols=35 Identities=29% Similarity=0.214 Sum_probs=28.2
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHH
Q 020285 233 PKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 275 (328)
Q Consensus 233 p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~ 275 (328)
+- |.+|+..|..+.+.. + .++|+||+..|+++-+.
T Consensus 143 ~f-G~dK~~vI~~l~e~~----e---~~fy~GDsvsDlsaakl 177 (220)
T COG4359 143 QF-GHDKSSVIHELSEPN----E---SIFYCGDSVSDLSAAKL 177 (220)
T ss_pred cc-CCCcchhHHHhhcCC----c---eEEEecCCcccccHhhh
Confidence 55 899999999987742 2 69999999999887554
No 156
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.22 E-value=0.1 Score=44.30 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=24.1
Q ss_pred CChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 90 MSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 90 is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
+.+.+.+.|+.+.+. .+++|+||.....+..++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~ 107 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVA 107 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 345677777777777 478888888887777654
No 157
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=93.14 E-value=0.18 Score=45.68 Aligned_cols=64 Identities=16% Similarity=0.057 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCC-CCCCceEEEEeCCcCCHHHHHHHHhCCCc-eEEEEcCCCC------------------------
Q 020285 239 KGKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKILRKREQG-FGILVSKFPK------------------------ 292 (328)
Q Consensus 239 KG~al~~Ll~~lg~~-~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g-~~v~v~n~~~------------------------ 292 (328)
+-..+...++.+|+. ++ .+++|||+.+|+.+=+.+ | ..|.|..+..
T Consensus 158 ~p~~~~~a~~~l~~~~~~---~~l~IGDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (253)
T TIGR01422 158 APWMALKNAIELGVYDVA---ACVKVGDTVPDIEEGRNA-----GMWTVGLILSSNELGLSEEEYRALDPAELEARRAEA 229 (253)
T ss_pred CHHHHHHHHHHcCCCCch---heEEECCcHHHHHHHHHC-----CCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHH
Confidence 356778889999985 55 799999999998776665 4 3555543321
Q ss_pred -----CccceEEeCChhHHHHHH
Q 020285 293 -----KTSASYSLREPDEVMDFL 310 (328)
Q Consensus 293 -----~t~A~~~l~~~~~V~~~L 310 (328)
+..|+++++++.++..+|
T Consensus 230 ~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 230 TARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHhcCCCEehhcHHHHHHhh
Confidence 235789999988876654
No 158
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.73 E-value=0.23 Score=45.85 Aligned_cols=52 Identities=21% Similarity=0.296 Sum_probs=37.6
Q ss_pred CCEEEEEecCCcccCC---------CCCC------C-------cccCChHHHHHHHHHHhc-CCEEEEcCCChhh
Q 020285 66 KQIVMFLDYDGTLSPI---------VENP------D-------RAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDK 117 (328)
Q Consensus 66 k~~li~~D~DGTL~~~---------~~~p------~-------~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~ 117 (328)
.+-+++||+|+|++.. ...+ + .+..-|.+++..+.+.+. +.|+++|||+-..
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 4577899999999931 1001 1 344567889999999988 5999999998643
No 159
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=92.65 E-value=0.26 Score=43.37 Aligned_cols=64 Identities=20% Similarity=0.344 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHc-CCCCCCCceEEEEeCCc-CCHHHHHHHHhCCCce-EEEEcCC--C--CCccceEEeCChhHHHHHH
Q 020285 239 KGKALEFLLECL-GFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKF--P--KKTSASYSLREPDEVMDFL 310 (328)
Q Consensus 239 KG~al~~Ll~~l-g~~~~~~~~~i~~GD~~-nD~~Mf~~~~~~~~g~-~v~v~n~--~--~~t~A~~~l~~~~~V~~~L 310 (328)
+......+++.+ |++++ ++++|||+. +|+.+=+.+ |+ +|.+... + ....+.|++.++.++..+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~---~~v~igD~~~~di~~A~~~-----G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKE---EVLMIGDSLTADIKGGQNA-----GLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CHHHHHHHHHHhcCCCch---heEEECCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 456788999999 99887 799999997 798776665 54 3444332 1 2246778999999887654
No 160
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=92.49 E-value=0.34 Score=47.04 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC---CccceEEeCChhHH-HHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK---KTSASYSLREPDEV-MDFLQKLV 314 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~---~t~A~~~l~~~~~V-~~~L~~l~ 314 (328)
+...+...++.+|+.++ .+++|||+.+|+.+=+.+ | -..|.|..... ...|++++++.+++ ...|+.|+
T Consensus 274 ~Peifl~A~~~lgl~Pe---ecl~IGDS~~DIeAAk~A---G-m~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~ 346 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPE---RCIVFGNSNQTVEAAHDA---R-MKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLA 346 (381)
T ss_pred CHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHc---C-CEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhh
Confidence 56788999999999887 799999999997766665 1 23556655321 13588999999997 55666666
Q ss_pred Hhh
Q 020285 315 RWK 317 (328)
Q Consensus 315 ~~~ 317 (328)
...
T Consensus 347 ~~~ 349 (381)
T PLN02575 347 DIE 349 (381)
T ss_pred hcC
Confidence 544
No 161
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=92.45 E-value=0.2 Score=44.29 Aligned_cols=64 Identities=17% Similarity=0.078 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHcCCC-CCCCceEEEEeCCcCCHHHHHHHHhCCCceE--EEEcCCC--C----CccceEEeCChhHHHHH
Q 020285 239 KGKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKILRKREQGFG--ILVSKFP--K----KTSASYSLREPDEVMDF 309 (328)
Q Consensus 239 KG~al~~Ll~~lg~~-~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~--v~v~n~~--~----~t~A~~~l~~~~~V~~~ 309 (328)
+...+..+++.+|++ ++ .+++|||+.+|+.+=+.+ |+. |.+..+. . ...+++++.+..++...
T Consensus 147 ~p~~~~~a~~~~~~~~~~---~~~~igD~~~Di~aa~~a-----G~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQ---SVAVAGDTPNDLEAGINA-----GAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred CHHHHHHHHHHcCCCChh---HeEEeCCCHHHHHHHHHC-----CCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 568899999999997 45 799999999998887776 554 4454322 1 24578888888887664
Q ss_pred H
Q 020285 310 L 310 (328)
Q Consensus 310 L 310 (328)
+
T Consensus 219 ~ 219 (220)
T TIGR03351 219 L 219 (220)
T ss_pred h
Confidence 4
No 162
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=92.44 E-value=0.15 Score=45.10 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=25.3
Q ss_pred cCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 89 FMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
.+.|.+.+.|+.|.+. .+++|+||.....+..++
T Consensus 70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il 104 (214)
T TIGR03333 70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL 104 (214)
T ss_pred cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH
Confidence 3556677777778776 488999998887777655
No 163
>PRK11587 putative phosphatase; Provisional
Probab=92.31 E-value=0.31 Score=43.13 Aligned_cols=60 Identities=17% Similarity=0.055 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCCC---CccceEEeCChhHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK---KTSASYSLREPDEV 306 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~~---~t~A~~~l~~~~~V 306 (328)
+.......++.+|++++ ++++|||+.+|+.+=+.+ |+ +|.|.+... ...+++++++..++
T Consensus 140 ~p~~~~~~~~~~g~~p~---~~l~igDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQ---ECVVVEDAPAGVLSGLAA-----GCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcCCCcc---cEEEEecchhhhHHHHHC-----CCEEEEECCCCchhhhccCCEEecchhhe
Confidence 45678888899999887 899999999997766555 54 677765432 24578888887764
No 164
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.25 E-value=0.18 Score=54.57 Aligned_cols=61 Identities=25% Similarity=0.372 Sum_probs=48.2
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcC-CCC--CccceEEeCC
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK-FPK--KTSASYSLRE 302 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n-~~~--~t~A~~~l~~ 302 (328)
-+-.+.|. .|..-++.|.+. |. .+.+.||+.||.+|++.+ ..||+|+. +.+ +++|+.++-+
T Consensus 618 VfARvsP~---qK~~IV~~lq~~-g~------vVamtGDGvNDapALk~A-----DVGIamg~~Gtdaak~Aadivl~d 681 (917)
T COG0474 618 VFARVSPE---QKARIVEALQKS-GH------VVAMTGDGVNDAPALKAA-----DVGIAMGGEGTDAAKEAADIVLLD 681 (917)
T ss_pred EEEEcCHH---HHHHHHHHHHhC-CC------EEEEeCCCchhHHHHHhc-----CccEEecccHHHHHHhhcceEeec
Confidence 46678888 799999988876 43 689999999999999998 68998885 332 4678877744
No 165
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=92.12 E-value=0.17 Score=43.12 Aligned_cols=15 Identities=33% Similarity=0.676 Sum_probs=12.9
Q ss_pred CEEEEEecCCcccCC
Q 020285 67 QIVMFLDYDGTLSPI 81 (328)
Q Consensus 67 ~~li~~D~DGTL~~~ 81 (328)
|.+++||+||||+..
T Consensus 1 ~~~iiFD~dgTL~~~ 15 (188)
T TIGR01489 1 KVVVVSDFDGTITLN 15 (188)
T ss_pred CeEEEEeCCCcccCC
Confidence 468899999999984
No 166
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=92.11 E-value=0.25 Score=44.18 Aligned_cols=68 Identities=13% Similarity=0.126 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce--EEEEcCCCC--CccceEEeCChhHHHHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF--GILVSKFPK--KTSASYSLREPDEVMDFLQKLV 314 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~--~v~v~n~~~--~t~A~~~l~~~~~V~~~L~~l~ 314 (328)
+......+++.+|++++ .+++|||+.+|+.+=+.+ |. .+.|.+... ...+...+.+.+++.++|+.|.
T Consensus 151 ~p~~~~~~~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAE---RTLFIDDSEPILDAAAQF-----GIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred CHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHc-----CCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 46678999999999887 799999999986554444 55 355666432 2445555667777777777664
No 167
>PRK11590 hypothetical protein; Provisional
Probab=92.01 E-value=0.19 Score=44.47 Aligned_cols=43 Identities=16% Similarity=0.035 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcC
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 289 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n 289 (328)
|-.|-..|+.. ++.+.. ...+.|||.||.+||+.+ +.+++|..
T Consensus 161 g~~K~~~l~~~---~~~~~~---~~~aY~Ds~~D~pmL~~a-----~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERK---IGTPLR---LYSGYSDSKQDNPLLYFC-----QHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHH---hCCCcc---eEEEecCCcccHHHHHhC-----CCCEEECc
Confidence 44455444444 453332 678999999999999998 67888864
No 168
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=91.79 E-value=0.16 Score=44.05 Aligned_cols=46 Identities=26% Similarity=0.291 Sum_probs=34.1
Q ss_pred CEEEEEecCCcccCCCC----CCCcccCChHHHHHHHHHHhc-CCEEEEcC
Q 020285 67 QIVMFLDYDGTLSPIVE----NPDRAFMSGKMRRAVRQLAKY-FPTAIVTG 112 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~----~p~~~~is~~~~~aL~~L~~~-~~v~I~SG 112 (328)
++++|+|-||||--... ++++-..-+.+.++|.+|.+. .+++|+|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 67899999999986322 233345667889999999887 47888874
No 169
>PRK09449 dUMP phosphatase; Provisional
Probab=91.38 E-value=0.64 Score=41.08 Aligned_cols=65 Identities=17% Similarity=0.212 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCCC-CCCceEEEEeCCc-CCHHHHHHHHhCCCce-EEEEcC-CC---CCccceEEeCChhHHHHHHH
Q 020285 239 KGKALEFLLECLGFAD-CSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSK-FP---KKTSASYSLREPDEVMDFLQ 311 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~-~~~~~~i~~GD~~-nD~~Mf~~~~~~~~g~-~v~v~n-~~---~~t~A~~~l~~~~~V~~~L~ 311 (328)
+-.....+++.+|+.+ + .+++|||+. +|+.+=+.+ |+ +|.+.. .. ....++|++.++.++.++|.
T Consensus 152 ~p~~~~~~~~~~~~~~~~---~~~~vgD~~~~Di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRS---RVLMVGDNLHSDILGGINA-----GIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CHHHHHHHHHHcCCCCcc---cEEEEcCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 3467889999999754 4 799999997 798766665 55 455542 21 12357899999999888764
No 170
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=91.10 E-value=0.39 Score=42.32 Aligned_cols=60 Identities=22% Similarity=0.247 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCc-CCHHHHHHHHhCCCce-EEEEcCCCC-------CccceEEeCChhHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKFPK-------KTSASYSLREPDEV 306 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~-nD~~Mf~~~~~~~~g~-~v~v~n~~~-------~t~A~~~l~~~~~V 306 (328)
+......+++.+|++++ .+++|||+. +|+.+=+.+ |+ +|.+..... ...+.|++.++.++
T Consensus 152 ~~~~~~~~~~~~~~~~~---~~~~igDs~~~di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPE---EAVMVGDRLDKDIKGAKNL-----GMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred CHHHHHHHHHHcCCChh---hEEEECCChHHHHHHHHHC-----CCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 45678999999999876 799999997 998877766 44 566655432 12456777777654
No 171
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=91.01 E-value=0.24 Score=43.96 Aligned_cols=43 Identities=21% Similarity=0.088 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcC
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 289 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n 289 (328)
|--|-..|+..+ +.+. ....+.|||.||.+||+.+ |.+++|..
T Consensus 160 g~~Kv~rl~~~~---~~~~---~~~~aYsDS~~D~pmL~~a-----~~~~~Vnp 202 (210)
T TIGR01545 160 GHEKVAQLEQKI---GSPL---KLYSGYSDSKQDNPLLAFC-----EHRWRVSK 202 (210)
T ss_pred ChHHHHHHHHHh---CCCh---hheEEecCCcccHHHHHhC-----CCcEEECc
Confidence 445555555444 4222 2578999999999999998 77888863
No 172
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=90.49 E-value=0.48 Score=40.58 Aligned_cols=48 Identities=29% Similarity=0.385 Sum_probs=37.5
Q ss_pred EEEEEecCCcccCC---CCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCCh
Q 020285 68 IVMFLDYDGTLSPI---VENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCR 115 (328)
Q Consensus 68 ~li~~D~DGTL~~~---~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 115 (328)
+++|+|.||||... ...+++..+-|.+.++|++|+++ .+++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 67999999999942 22334555678999999999988 59999997764
No 173
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=90.34 E-value=0.44 Score=43.27 Aligned_cols=60 Identities=12% Similarity=0.151 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCC-C-C---CccceEEeCChhH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKF-P-K---KTSASYSLREPDE 305 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~-~-~---~t~A~~~l~~~~~ 305 (328)
-+...+...++.+|++++ .+++|||+.+|+.+=+.+ |+ .|.+..+ + . +..|+|++.++.+
T Consensus 165 P~p~~~~~a~~~~~~~~~---~~l~vgDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKD---HTFVFEDSVSGIKAGVAA-----GMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CChHHHHHHHHHhCCChh---HEEEEcCCHHHHHHHHHC-----CCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 345778999999999876 899999999998776665 44 4445432 1 1 2468899998887
No 174
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=90.32 E-value=0.18 Score=43.27 Aligned_cols=36 Identities=11% Similarity=-0.015 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
-+-..+..+++.+|++++ .+++|||+.+|+++=+.+
T Consensus 143 P~p~~~~~~~~~~~~~~~---~~l~igDs~~di~aA~~a 178 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPT---QCVVFEDADFGIQAARAA 178 (188)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeccHhhHHHHHHC
Confidence 356779999999999876 899999999998766655
No 175
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=90.21 E-value=0.49 Score=44.08 Aligned_cols=60 Identities=18% Similarity=0.150 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCC--CC--ccceEEeCChhHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--KK--TSASYSLREPDEV 306 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~--~~--t~A~~~l~~~~~V 306 (328)
+...+..+++.+|++++ .+++|||+.+|+.+=+.+ |+ .|.|..+. .+ ..|+++++++.++
T Consensus 204 ~p~~~~~a~~~~~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETLGVDPS---RCVVVEDSVIGLQAAKAA-----GMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHhCcChH---HEEEEeCCHHhHHHHHHc-----CCEEEEEccCCccccccCCCcEEECChhhc
Confidence 35688999999999886 799999999998887776 54 44554332 11 3588898887664
No 176
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=89.90 E-value=0.04 Score=48.09 Aligned_cols=60 Identities=23% Similarity=0.262 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeC
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLR 301 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~ 301 (328)
+--|+.+|..|++.+++. .++++||+-||++|..-+.... |+|=.+-.++.+.+|+|.+.
T Consensus 157 sggKa~~i~~lrk~~~~~-----~~~mvGDGatDlea~~pa~afi-~~~g~~~r~~vk~nak~~~~ 216 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYK-----TIVMVGDGATDLEAMPPADAFI-GFGGNVIREGVKANAKWYVT 216 (227)
T ss_pred CCccHHHHHHHHhCCChh-----eeEEecCCccccccCCchhhhh-ccCCceEcHhhHhccHHHHH
Confidence 447999999999944443 7999999999999876643321 33322222233455555443
No 177
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=89.35 E-value=0.78 Score=48.29 Aligned_cols=61 Identities=23% Similarity=0.268 Sum_probs=48.3
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEc-CCCC--CccceEEeCC
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS-KFPK--KTSASYSLRE 302 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~-n~~~--~t~A~~~l~~ 302 (328)
.+--+.|+ .|-+-++.|.+. .+ .+..-||+.||-++|+.+ .+||+|| ++.. +++|+.+|.|
T Consensus 657 vFaR~~P~---HK~kIVeaLq~~----ge---ivAMTGDGVNDApALK~A-----dIGIAMG~~GTdVaKeAsDMVL~D 720 (972)
T KOG0202|consen 657 VFARAEPQ---HKLKIVEALQSR----GE---VVAMTGDGVNDAPALKKA-----DIGIAMGISGTDVAKEASDMVLAD 720 (972)
T ss_pred EEEecCch---hHHHHHHHHHhc----CC---EEEecCCCccchhhhhhc-----ccceeecCCccHhhHhhhhcEEec
Confidence 34456677 799999988765 22 677889999999999998 6999999 6653 6889998854
No 178
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=89.25 E-value=0.25 Score=43.01 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCc-CCHHHHHHH
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKIL 276 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~GD~~-nD~~Mf~~~ 276 (328)
.....++++.+|++++ .+++|||+. +|+.+=+.+
T Consensus 163 ~~~~~~~~~~~~~~~~---~~~~IgD~~~~Di~~A~~a 197 (203)
T TIGR02252 163 PKIFQEALERAGISPE---EALHIGDSLRNDYQGARAA 197 (203)
T ss_pred HHHHHHHHHHcCCChh---HEEEECCCchHHHHHHHHc
Confidence 4568999999999887 899999997 898766654
No 179
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=89.19 E-value=0.2 Score=43.55 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAF 273 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf 273 (328)
+-..+..+++.+|++++ .+++|||+.+|+.+=
T Consensus 163 ~p~~~~~~~~~~~~~~~---~~i~vGD~~~Di~aA 194 (197)
T TIGR01548 163 NPEPLILAAKALGVEAC---HAAMVGDTVDDIITG 194 (197)
T ss_pred CHHHHHHHHHHhCcCcc---cEEEEeCCHHHHHHH
Confidence 35667888999999876 799999999997653
No 180
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=89.13 E-value=0.84 Score=41.93 Aligned_cols=64 Identities=14% Similarity=0.113 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCC-C--CccceEEeCChhHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP-K--KTSASYSLREPDEVMDFL 310 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~-~--~t~A~~~l~~~~~V~~~L 310 (328)
+-..+..+++.+|++++ .+++|||+.+|+.+=+.+ |+ .|++.... . -..|+|++.+++++...+
T Consensus 167 ~Pe~~~~a~~~l~~~p~---~~l~IgDs~~Di~aA~~a-----G~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~ 234 (260)
T PLN03243 167 DPEMFMYAAERLGFIPE---RCIVFGNSNSSVEAAHDG-----CMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVD 234 (260)
T ss_pred CHHHHHHHHHHhCCChH---HeEEEcCCHHHHHHHHHc-----CCEEEEEecCCchhhhccCCEEeCCHHHHHHHH
Confidence 45678899999999887 799999999998776665 44 44554221 1 145789999998865544
No 181
>PRK11590 hypothetical protein; Provisional
Probab=88.92 E-value=0.23 Score=44.01 Aligned_cols=15 Identities=47% Similarity=0.809 Sum_probs=13.0
Q ss_pred CCEEEEEecCCcccC
Q 020285 66 KQIVMFLDYDGTLSP 80 (328)
Q Consensus 66 k~~li~~D~DGTL~~ 80 (328)
++++++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 567899999999994
No 182
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=88.86 E-value=0.25 Score=43.45 Aligned_cols=49 Identities=16% Similarity=0.114 Sum_probs=27.0
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCCc----CCHHHHHHHHhC-C--CceEEEEcCCC
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDDT----TDEDAFKILRKR-E--QGFGILVSKFP 291 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~~----nD~~Mf~~~~~~-~--~g~~v~v~n~~ 291 (328)
..++..++.+|+..- ...++.+|+. -+-++|+.+-+. + ..-.+.||+++
T Consensus 110 ~~~~~~l~~~gl~~~--f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~ 165 (214)
T PRK13288 110 DTVEMGLKLTGLDEF--FDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNH 165 (214)
T ss_pred HHHHHHHHHcCChhc--eeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCH
Confidence 456778888888753 1233334432 355666655432 1 12257788775
No 183
>PRK11587 putative phosphatase; Provisional
Probab=88.53 E-value=0.25 Score=43.79 Aligned_cols=14 Identities=36% Similarity=0.444 Sum_probs=12.3
Q ss_pred CEEEEEecCCcccC
Q 020285 67 QIVMFLDYDGTLSP 80 (328)
Q Consensus 67 ~~li~~D~DGTL~~ 80 (328)
.+.++||+||||+.
T Consensus 3 ~k~viFDlDGTL~D 16 (218)
T PRK11587 3 CKGFLFDLDGTLVD 16 (218)
T ss_pred CCEEEEcCCCCcCc
Confidence 35789999999998
No 184
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=88.50 E-value=0.59 Score=41.10 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=19.7
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 104 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 104 (328)
++++||+||||+... ..+......+.+.+.+.
T Consensus 3 ~~viFDlDGTL~ds~-----~~~~~~~~~~~~~~~~~ 34 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS-----GLAEKARRNAIEVLIEA 34 (221)
T ss_pred eEEEEeCCCCCcCCC-----CccCHHHHHHHHHHHHC
Confidence 578999999999832 23333334444545554
No 185
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=88.47 E-value=1.1 Score=44.51 Aligned_cols=65 Identities=18% Similarity=0.135 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCC--C--CccceEEeCChhHHHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--K--KTSASYSLREPDEVMDFLQKL 313 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~--~--~t~A~~~l~~~~~V~~~L~~l 313 (328)
|-..+...++.++. + .+++|||+.+|+.+-+.+ |+ .|.+.... . ...++|++.++.++..+|..+
T Consensus 387 kP~~~~~al~~l~~--~---~~v~VGDs~~Di~aAk~A-----G~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 387 KSDLVKSILNKYDI--K---EAAVVGDRLSDINAAKDN-----GLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred CcHHHHHHHHhcCc--c---eEEEEeCCHHHHHHHHHC-----CCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 55677888887653 3 799999999999888876 54 55664432 1 245889999999988877554
No 186
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.43 E-value=1.4 Score=40.34 Aligned_cols=50 Identities=18% Similarity=0.154 Sum_probs=39.0
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHH
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVY 119 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~ 119 (328)
++++||+||||..... ....+.|.+.++|++|+++ .+++++|||+.....
T Consensus 2 k~i~~D~DGtl~~~~~--~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~ 52 (257)
T TIGR01458 2 KGVLLDISGVLYISDA--KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQ 52 (257)
T ss_pred CEEEEeCCCeEEeCCC--cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHH
Confidence 4789999999998311 0012778999999999998 499999998887643
No 187
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=87.71 E-value=0.38 Score=43.38 Aligned_cols=63 Identities=14% Similarity=0.076 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHHHhCCCce-EEEEcCCCCC--------ccceEEeCChhHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGF-GILVSKFPKK--------TSASYSLREPDEVMD 308 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~~~~~~g~-~v~v~n~~~~--------t~A~~~l~~~~~V~~ 308 (328)
+.......++.+|++++ ++++|||+ ..|+..=+.+ |+ +|.+...... ...++.+.+-.++.+
T Consensus 165 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~ 236 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIG---EILHVGDDLTTDVAGAIRC-----GMQACWINPENGDLMQTWDSRLLPHIEISRLASLTS 236 (238)
T ss_pred cHHHHHHHHHHcCCChh---HEEEEcCCcHHHHHHHHHC-----CCeEEEEcCCCccccccccccCCCCEEECCHHHHHh
Confidence 46678888899999876 79999999 5998765554 43 5555442211 124455666666555
Q ss_pred H
Q 020285 309 F 309 (328)
Q Consensus 309 ~ 309 (328)
+
T Consensus 237 ~ 237 (238)
T PRK10748 237 L 237 (238)
T ss_pred h
Confidence 4
No 188
>PLN02645 phosphoglycolate phosphatase
Probab=87.62 E-value=1.8 Score=40.73 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=38.2
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHh
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYD 120 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~ 120 (328)
++++||+||||+.. . .+-+...++|++|++++ +++++|+|+......
T Consensus 29 ~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~ 76 (311)
T PLN02645 29 ETFIFDCDGVIWKG-----D-KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQ 76 (311)
T ss_pred CEEEEeCcCCeEeC-----C-ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHH
Confidence 67999999999983 2 35588899999999985 899999999555443
No 189
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=87.47 E-value=0.34 Score=44.00 Aligned_cols=14 Identities=36% Similarity=0.529 Sum_probs=12.4
Q ss_pred CEEEEEecCCcccC
Q 020285 67 QIVMFLDYDGTLSP 80 (328)
Q Consensus 67 ~~li~~D~DGTL~~ 80 (328)
-+.++||+||||+.
T Consensus 22 ~k~viFDlDGTLiD 35 (248)
T PLN02770 22 LEAVLFDVDGTLCD 35 (248)
T ss_pred cCEEEEcCCCccCc
Confidence 36799999999998
No 190
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=87.30 E-value=1.3 Score=40.19 Aligned_cols=45 Identities=24% Similarity=0.203 Sum_probs=35.6
Q ss_pred cchHHHHHhhhh-CCCCcchHHHHHHhhcCCCEEEEEecCCcccCC
Q 020285 37 SLLEEKRAWIIR-HPSALDMFHEITEASKGKQIVMFLDYDGTLSPI 81 (328)
Q Consensus 37 ~~~~~~~~w~~~-~~~al~~~~~~~~~~~~k~~li~~D~DGTL~~~ 81 (328)
|.+.++++.-.+ +-+|=-.||.-+...++|++.|++|+|-|.++.
T Consensus 48 Q~s~E~~AL~~Q~yn~Ak~~~d~~~k~~k~K~~aVvlDlDETvLdN 93 (274)
T COG2503 48 QQSAEYQALYLQAYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDN 93 (274)
T ss_pred hhhHHHHHHHHHHhhhHHHHHHhhhccccCCCceEEEecchHhhcC
Confidence 556677776544 667777788777788889999999999999983
No 191
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=87.18 E-value=0.54 Score=40.30 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
+-...+++++.+|+.++ ++++|||+..|+.+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~l~vgD~~~di~aA~~~ 177 (184)
T TIGR01993 143 SPQAYEKALREAGVDPE---RAIFFDDSARNIAAAKAL 177 (184)
T ss_pred CHHHHHHHHHHhCCCcc---ceEEEeCCHHHHHHHHHc
Confidence 45688899999999887 799999998886655544
No 192
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=87.15 E-value=1.2 Score=47.37 Aligned_cols=69 Identities=19% Similarity=0.232 Sum_probs=52.2
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEe--CC
Q 020285 227 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--RE 302 (328)
Q Consensus 227 ~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l--~~ 302 (328)
-+-|+.|. .|..-++.|.+.-+ -+..+||+.||-++|..+ .+||+++.+.. -..|++++ ++
T Consensus 765 V~aev~P~---~K~~~Ik~lq~~~~-------~VaMVGDGINDaPALA~A-----dVGIaig~gs~vAieaADIVLmrn~ 829 (951)
T KOG0207|consen 765 VYAEVLPE---QKAEKIKEIQKNGG-------PVAMVGDGINDAPALAQA-----DVGIAIGAGSDVAIEAADIVLMRND 829 (951)
T ss_pred EEeccCch---hhHHHHHHHHhcCC-------cEEEEeCCCCccHHHHhh-----ccceeeccccHHHHhhCCEEEEccc
Confidence 35788888 69888888887641 489999999999999998 58888888753 36788887 34
Q ss_pred hhHHHHHH
Q 020285 303 PDEVMDFL 310 (328)
Q Consensus 303 ~~~V~~~L 310 (328)
-.+|...+
T Consensus 830 L~~v~~ai 837 (951)
T KOG0207|consen 830 LRDVPFAI 837 (951)
T ss_pred hhhhHHHH
Confidence 44554444
No 193
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=86.90 E-value=0.34 Score=41.31 Aligned_cols=35 Identities=17% Similarity=0.098 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
+...+..+++.+|++++ .+++|||+.+|+.+=+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~---~~v~IgD~~~di~aA~~~ 178 (185)
T TIGR02009 144 HPETFLLAAELLGVSPN---ECVVFEDALAGVQAARAA 178 (185)
T ss_pred ChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence 45677899999999876 899999999998877665
No 194
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=86.83 E-value=2.7 Score=36.42 Aligned_cols=77 Identities=19% Similarity=0.211 Sum_probs=52.7
Q ss_pred hhhhCCCCcchHHHHHHhhcCC-CEEEEEecCCcccCCCC---------CC-------------------CcccCChHHH
Q 020285 45 WIIRHPSALDMFHEITEASKGK-QIVMFLDYDGTLSPIVE---------NP-------------------DRAFMSGKMR 95 (328)
Q Consensus 45 w~~~~~~al~~~~~~~~~~~~k-~~li~~D~DGTL~~~~~---------~p-------------------~~~~is~~~~ 95 (328)
-..+-|=-+=+.++|.....++ .+.+-||+|.|++-... .| |.-.|+.+..
T Consensus 40 l~~qa~ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA 119 (237)
T COG3700 40 LAEQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVA 119 (237)
T ss_pred HhhhCCeeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHH
Confidence 3445565555678998888664 47788899999985210 01 1234777777
Q ss_pred HHHHHHHhc-C-CEEEEcCCChhhHHhh
Q 020285 96 RAVRQLAKY-F-PTAIVTGRCRDKVYDF 121 (328)
Q Consensus 96 ~aL~~L~~~-~-~v~I~SGR~~~~v~~~ 121 (328)
.-|-.+.+. + .++++|||+..++...
T Consensus 120 ~qLI~MHq~RGD~i~FvTGRt~gk~d~v 147 (237)
T COG3700 120 RQLIDMHQRRGDAIYFVTGRTPGKTDTV 147 (237)
T ss_pred HHHHHHHHhcCCeEEEEecCCCCccccc
Confidence 666667665 5 8999999999876543
No 195
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=86.08 E-value=0.48 Score=41.78 Aligned_cols=28 Identities=32% Similarity=0.363 Sum_probs=18.7
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 104 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 104 (328)
++++||+||||+.. . +...++++++.+.
T Consensus 2 k~iiFD~DGTL~ds-----~----~~~~~~~~~~~~~ 29 (220)
T TIGR03351 2 SLVVLDMAGTTVDE-----D----GLVYRALRQAVTA 29 (220)
T ss_pred cEEEEecCCCeecc-----C----chHHHHHHHHHHH
Confidence 56889999999983 1 2345555555544
No 196
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=84.50 E-value=0.91 Score=41.11 Aligned_cols=14 Identities=21% Similarity=0.351 Sum_probs=12.4
Q ss_pred CEEEEEecCCcccC
Q 020285 67 QIVMFLDYDGTLSP 80 (328)
Q Consensus 67 ~~li~~D~DGTL~~ 80 (328)
-+.|+||+||||+.
T Consensus 2 ~k~viFD~DGTLiD 15 (253)
T TIGR01422 2 IEAVIFDWAGTTVD 15 (253)
T ss_pred ceEEEEeCCCCeec
Confidence 36799999999998
No 197
>PHA02597 30.2 hypothetical protein; Provisional
Probab=84.45 E-value=0.49 Score=41.03 Aligned_cols=60 Identities=15% Similarity=0.078 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCC--CCccceEEeCChhHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--KKTSASYSLREPDEV 306 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~--~~t~A~~~l~~~~~V 306 (328)
|-..+..+++.+| ++ .+++|||+.+|+.+=+.+- .|+ .|.+..+. ......|.+.+..++
T Consensus 132 kp~~~~~a~~~~~--~~---~~v~vgDs~~di~aA~~a~---~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~ 194 (197)
T PHA02597 132 KEKLFIKAKEKYG--DR---VVCFVDDLAHNLDAAHEAL---SQLPVIHMLRGERDHIPKLAHRVKSWNDI 194 (197)
T ss_pred cHHHHHHHHHHhC--CC---cEEEeCCCHHHHHHHHHHH---cCCcEEEecchhhccccchhhhhccHHHH
Confidence 5678999999999 33 6999999999966555430 033 44454332 122444666666554
No 198
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=84.43 E-value=0.61 Score=40.97 Aligned_cols=50 Identities=10% Similarity=-0.027 Sum_probs=26.9
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeC---CcCCHHHHHHHHh-C-C--CceEEEEcCCC
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGD---DTTDEDAFKILRK-R-E--QGFGILVSKFP 291 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD---~~nD~~Mf~~~~~-~-~--~g~~v~v~n~~ 291 (328)
..++.+++.+++... .+.+++.+| ...|-++|+.+-. . + ..-.+.||.+.
T Consensus 124 ~~~~~~l~~~~l~~~-fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~ 180 (224)
T TIGR02254 124 ETQYKRLRKSGLFPF-FDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSL 180 (224)
T ss_pred HHHHHHHHHCCcHhh-cCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCc
Confidence 345667788887642 224555444 2367666665433 2 1 12257777654
No 199
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=84.36 E-value=0.57 Score=41.47 Aligned_cols=16 Identities=25% Similarity=0.414 Sum_probs=13.6
Q ss_pred CCCEEEEEecCCcccC
Q 020285 65 GKQIVMFLDYDGTLSP 80 (328)
Q Consensus 65 ~k~~li~~D~DGTL~~ 80 (328)
++-+.|+||+||||++
T Consensus 5 ~~~k~iiFD~DGTL~d 20 (222)
T PRK10826 5 RQILAAIFDMDGLLID 20 (222)
T ss_pred ccCcEEEEcCCCCCCc
Confidence 3457899999999998
No 200
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=83.99 E-value=0.48 Score=42.41 Aligned_cols=49 Identities=14% Similarity=0.110 Sum_probs=26.0
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCC----cCCHHHHHHHHhC-C--CceEEEEcCCC
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDD----TTDEDAFKILRKR-E--QGFGILVSKFP 291 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~----~nD~~Mf~~~~~~-~--~g~~v~v~n~~ 291 (328)
.-++.+++.+|+... ...+..||+ .-|-++|..+-+. | ..-.+.+|.+.
T Consensus 123 ~~~~~~l~~~~l~~~--f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~ 178 (229)
T PRK13226 123 YLARLILPQLGWEQR--CAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDE 178 (229)
T ss_pred HHHHHHHHHcCchhc--ccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCH
Confidence 344667788887643 123444443 2466666665431 1 12257777764
No 201
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=83.87 E-value=0.64 Score=43.29 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.9
Q ss_pred CCEEEEEecCCcccC
Q 020285 66 KQIVMFLDYDGTLSP 80 (328)
Q Consensus 66 k~~li~~D~DGTL~~ 80 (328)
+-++|+||+||||+.
T Consensus 39 ~~k~VIFDlDGTLvD 53 (286)
T PLN02779 39 LPEALLFDCDGVLVE 53 (286)
T ss_pred CCcEEEEeCceeEEc
Confidence 346799999999998
No 202
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=83.82 E-value=0.71 Score=40.77 Aligned_cols=41 Identities=7% Similarity=0.058 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEE
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGIL 286 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~ 286 (328)
-+......+++.+|++++ .+++|||+.+|+.+=+.+ |+.++
T Consensus 143 P~p~~~~~a~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~i 183 (221)
T PRK10563 143 PDPALMFHAAEAMNVNVE---NCILVDDSSAGAQSGIAA-----GMEVF 183 (221)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC-----CCEEE
Confidence 357889999999999876 799999999998776665 66543
No 203
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=83.79 E-value=0.99 Score=40.04 Aligned_cols=16 Identities=38% Similarity=0.698 Sum_probs=13.4
Q ss_pred CCEEEEEecCCcccCC
Q 020285 66 KQIVMFLDYDGTLSPI 81 (328)
Q Consensus 66 k~~li~~D~DGTL~~~ 81 (328)
-+++.+||+||||+..
T Consensus 4 ~~~la~FDfDgTLt~~ 19 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQ 19 (210)
T ss_pred cCcEEEEcCCCCCccC
Confidence 4677889999999983
No 204
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=83.66 E-value=0.89 Score=38.65 Aligned_cols=36 Identities=19% Similarity=0.103 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
-+-...+..++.++++++ .+++|||+.+|+.+=+.+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~v~vgD~~~di~aA~~a 177 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPS---ECIGIEDAQAGIEAIKAA 177 (185)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEecCHHHHHHHHHc
Confidence 356778899999999876 899999999998777665
No 205
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=83.42 E-value=0.53 Score=38.90 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 275 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~ 275 (328)
.+...+..+++.+|+++ .+++|||+.+|+.+=+.
T Consensus 119 p~~~~~~~~~~~~~~~~----~~l~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP----EVLHVGDNLNDIEGARN 152 (154)
T ss_pred cCHHHHHHHHHHcCCCC----CEEEEeCCHHHHHHHHH
Confidence 35788999999999875 49999999999776544
No 206
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=83.21 E-value=0.5 Score=41.23 Aligned_cols=48 Identities=17% Similarity=0.114 Sum_probs=25.3
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCC----cCCHHHHHHHHhC-C--CceEEEEcCCC
Q 020285 242 ALEFLLECLGFADCSNVFPVYIGDD----TTDEDAFKILRKR-E--QGFGILVSKFP 291 (328)
Q Consensus 242 al~~Ll~~lg~~~~~~~~~i~~GD~----~nD~~Mf~~~~~~-~--~g~~v~v~n~~ 291 (328)
.++.+++.+|+... .+.+ +.+|+ ..+-++|+.+-+. + ..-.+.||+..
T Consensus 104 ~~~~~l~~~~l~~~-f~~i-~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~ 158 (205)
T TIGR01454 104 RARSLLEALGLLPL-FDHV-IGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAV 158 (205)
T ss_pred HHHHHHHHcCChhh-eeeE-EecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCH
Confidence 46677888888642 1133 33333 2367777765332 1 11256777764
No 207
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=83.14 E-value=0.71 Score=39.81 Aligned_cols=14 Identities=36% Similarity=0.634 Sum_probs=12.5
Q ss_pred CEEEEEecCCcccC
Q 020285 67 QIVMFLDYDGTLSP 80 (328)
Q Consensus 67 ~~li~~D~DGTL~~ 80 (328)
.++++||+||||+.
T Consensus 4 ~k~viFD~DGTLid 17 (201)
T TIGR01491 4 IKLIIFDLDGTLTD 17 (201)
T ss_pred ceEEEEeCCCCCcC
Confidence 46799999999998
No 208
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=83.12 E-value=1.7 Score=35.02 Aligned_cols=36 Identities=31% Similarity=0.232 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHc-CCCCCCCceEEEEeC-CcCCHHHHHHH
Q 020285 238 DKGKALEFLLECL-GFADCSNVFPVYIGD-DTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~l-g~~~~~~~~~i~~GD-~~nD~~Mf~~~ 276 (328)
.|..+++++++.+ +++++ ++++||| ..+|+.+-+.+
T Consensus 86 P~~~~~~~~~~~~~~~~~~---~~v~IGD~~~~Di~~A~~~ 123 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPE---ESVYVGDQDLTDLQAAKRA 123 (132)
T ss_pred CChHHHHHHHHHcCCCChh---heEEEcCCCcccHHHHHHC
Confidence 4678999999999 59887 8999999 79998877765
No 209
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=82.99 E-value=2.5 Score=37.19 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=29.1
Q ss_pred cccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhh
Q 020285 87 RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 121 (328)
Q Consensus 87 ~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~ 121 (328)
...++|..++.+.+|++.+ +|+++||-=+..+...
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~V 121 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPV 121 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHH
Confidence 3468999999999999995 9999999877766554
No 210
>PLN02940 riboflavin kinase
Probab=82.87 E-value=1.9 Score=41.89 Aligned_cols=61 Identities=20% Similarity=0.080 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCCC----CccceEEeCChhHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK----KTSASYSLREPDEV 306 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~~----~t~A~~~l~~~~~V 306 (328)
-+...+..+++.+|++++ ++++|||+.+|+.+=+.+ |+ .|.|..... ...|++++.+..++
T Consensus 151 P~p~~~~~a~~~lgv~p~---~~l~VGDs~~Di~aA~~a-----Gi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 151 PSPDIFLEAAKRLNVEPS---NCLVIEDSLPGVMAGKAA-----GMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CCHHHHHHHHHHcCCChh---HEEEEeCCHHHHHHHHHc-----CCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 356788999999999887 899999999998776665 54 455654321 24577888887764
No 211
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=82.74 E-value=0.77 Score=40.85 Aligned_cols=49 Identities=33% Similarity=0.552 Sum_probs=28.1
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEe-CCc-C---CHHH-HHHHHhCCCc--eEEEEcCCC
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIG-DDT-T---DEDA-FKILRKREQG--FGILVSKFP 291 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~G-D~~-n---D~~M-f~~~~~~~~g--~~v~v~n~~ 291 (328)
...++.+++.+|+..- +...+| |+. . |-.+ +..+...+.. -.+.||.+.
T Consensus 116 ~~~~~~~l~~~gl~~~---F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~ 172 (220)
T COG0546 116 ERELDILLKALGLADY---FDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSL 172 (220)
T ss_pred HHHHHHHHHHhCCccc---cceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCH
Confidence 3557888999999865 555555 532 1 3344 4444443322 237778764
No 212
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=82.63 E-value=0.94 Score=38.48 Aligned_cols=35 Identities=31% Similarity=0.155 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
|-..+..+++.++++++ ++++|||+.+|+++-+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~---e~l~IGD~~~Di~~A~~a 139 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKA---RSYVIGDRETDMQLAENL 139 (161)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHC
Confidence 56778899999998876 899999999999887776
No 213
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=82.55 E-value=0.6 Score=41.72 Aligned_cols=13 Identities=46% Similarity=0.598 Sum_probs=11.9
Q ss_pred EEEEEecCCcccC
Q 020285 68 IVMFLDYDGTLSP 80 (328)
Q Consensus 68 ~li~~D~DGTL~~ 80 (328)
++++||+||||+.
T Consensus 11 k~vIFDlDGTL~d 23 (224)
T PRK14988 11 DTVLLDMDGTLLD 23 (224)
T ss_pred CEEEEcCCCCccc
Confidence 5799999999998
No 214
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=82.49 E-value=0.58 Score=43.35 Aligned_cols=14 Identities=36% Similarity=0.667 Sum_probs=12.2
Q ss_pred CEEEEEecCCcccC
Q 020285 67 QIVMFLDYDGTLSP 80 (328)
Q Consensus 67 ~~li~~D~DGTL~~ 80 (328)
.+.++||+||||++
T Consensus 62 ~k~vIFDlDGTLiD 75 (273)
T PRK13225 62 LQAIIFDFDGTLVD 75 (273)
T ss_pred cCEEEECCcCcccc
Confidence 45789999999998
No 215
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=82.37 E-value=0.97 Score=38.20 Aligned_cols=30 Identities=10% Similarity=0.120 Sum_probs=25.1
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHH
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDA 272 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~M 272 (328)
-.....+++.+|++++ ++++|||+..|+.+
T Consensus 142 p~~f~~~~~~~~~~p~---~~l~vgD~~~Di~~ 171 (175)
T TIGR01493 142 PVVYELVFDTVGLPPD---RVLMVAAHQWDLIG 171 (175)
T ss_pred HHHHHHHHHHHCCCHH---HeEeEecChhhHHH
Confidence 4556888899999877 89999999999764
No 216
>PRK10444 UMP phosphatase; Provisional
Probab=82.17 E-value=3.8 Score=37.33 Aligned_cols=61 Identities=20% Similarity=0.067 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCc-CCHHHHHHHHhCCCce-EEEEcCCCC--------CccceEEeCChhHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKFPK--------KTSASYSLREPDEV 306 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~-nD~~Mf~~~~~~~~g~-~v~v~n~~~--------~t~A~~~l~~~~~V 306 (328)
-+...++.+++.++++.+ .+++|||+. +|+.+=+.+ |+ ++.|..+.- +...+|++++..++
T Consensus 175 P~~~~~~~~~~~~~~~~~---~~v~IGD~~~tDi~~A~~~-----G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSE---ETVIVGDNLRTDILAGFQA-----GLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEECCCcHHHHHHHHHc-----CCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 356678889999998876 799999996 898877766 43 667754421 13467888877664
No 217
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=82.01 E-value=0.73 Score=42.55 Aligned_cols=28 Identities=25% Similarity=0.310 Sum_probs=19.4
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 104 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 104 (328)
++++||+||||++. . +....++.++.+.
T Consensus 14 k~viFDlDGTL~Ds-----~----~~~~~a~~~~~~~ 41 (272)
T PRK13223 14 RLVMFDLDGTLVDS-----V----PDLAAAVDRMLLE 41 (272)
T ss_pred CEEEEcCCCccccC-----H----HHHHHHHHHHHHH
Confidence 47999999999983 1 2355666665554
No 218
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=81.94 E-value=1.8 Score=40.00 Aligned_cols=43 Identities=21% Similarity=0.151 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHHHhCCCce-EEEEcCC
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGF-GILVSKF 290 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~~~~~~g~-~v~v~n~ 290 (328)
...+..+++.+|++++ ++++|||+ .+|+.+=+.+ |+ +|.|..+
T Consensus 205 p~~~~~~~~~~~~~~~---~~lmIGD~~~tDI~~A~~a-----Gi~si~V~~G 249 (279)
T TIGR01452 205 PYMFECITENFSIDPA---RTLMVGDRLETDILFGHRC-----GMTTVLVLSG 249 (279)
T ss_pred HHHHHHHHHHhCCChh---hEEEECCChHHHHHHHHHc-----CCcEEEECCC
Confidence 4467888899998877 89999999 5998876655 44 5666543
No 219
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=81.86 E-value=3.5 Score=36.98 Aligned_cols=82 Identities=23% Similarity=0.298 Sum_probs=51.7
Q ss_pred EEEEcCCCCCHHHHHHHHHHHc---CCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEc--CCC---------CCc
Q 020285 229 MEIRPKIEWDKGKALEFLLECL---GFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS--KFP---------KKT 294 (328)
Q Consensus 229 lEI~p~~~~~KG~al~~Ll~~l---g~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~--n~~---------~~t 294 (328)
-...|+ +.-||..+.++.... |+.. +.++|+||+-||.--...+++ .-++|. +-+ -+-
T Consensus 155 C~~CPs-NmCKg~Vl~~~~~s~~~~gv~y---er~iYvGDG~nD~CP~l~Lr~----~D~ampRkgfpl~k~~~~~p~~~ 226 (256)
T KOG3120|consen 155 CNLCPS-NMCKGLVLDELVASQLKDGVRY---ERLIYVGDGANDFCPVLRLRA----CDVAMPRKGFPLWKLISANPMLL 226 (256)
T ss_pred cCcCch-hhhhhHHHHHHHHHHhhcCCce---eeEEEEcCCCCCcCcchhccc----CceecccCCCchHhhhhcCccee
Confidence 345788 889999999998776 4433 379999999999865555543 223332 111 112
Q ss_pred cceEEe-CChhHHHHHHHHHHHhhh
Q 020285 295 SASYSL-REPDEVMDFLQKLVRWKR 318 (328)
Q Consensus 295 ~A~~~l-~~~~~V~~~L~~l~~~~~ 318 (328)
.|.-.. .+-.++...|..++..-+
T Consensus 227 kasV~~W~sg~d~~~~L~~lik~~~ 251 (256)
T KOG3120|consen 227 KASVLEWSSGEDLERILQQLIKTIQ 251 (256)
T ss_pred eeeEEecccHHHHHHHHHHHHHHhh
Confidence 343332 466777787777765443
No 220
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=81.80 E-value=1.3 Score=40.55 Aligned_cols=15 Identities=20% Similarity=0.368 Sum_probs=12.9
Q ss_pred CEEEEEecCCcccCC
Q 020285 67 QIVMFLDYDGTLSPI 81 (328)
Q Consensus 67 ~~li~~D~DGTL~~~ 81 (328)
-+.++||+||||+..
T Consensus 4 ~k~vIFDlDGTLiDs 18 (267)
T PRK13478 4 IQAVIFDWAGTTVDF 18 (267)
T ss_pred eEEEEEcCCCCeecC
Confidence 468999999999983
No 221
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=81.70 E-value=2.2 Score=35.11 Aligned_cols=48 Identities=8% Similarity=0.099 Sum_probs=40.5
Q ss_pred EEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhhC
Q 020285 70 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 70 i~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~ 123 (328)
.+.++++|+.. ...+=+++.+.|++|.+...++|+||-....+.+...
T Consensus 17 ~~~~v~~tiat------gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT------GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc------CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHH
Confidence 35689999997 3567789999999999999999999999998887653
No 222
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=81.54 E-value=0.97 Score=39.88 Aligned_cols=49 Identities=16% Similarity=0.085 Sum_probs=26.6
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCCc----CCHHHHHHHHhC-CC--ceEEEEcCCC
Q 020285 242 ALEFLLECLGFADCSNVFPVYIGDDT----TDEDAFKILRKR-EQ--GFGILVSKFP 291 (328)
Q Consensus 242 al~~Ll~~lg~~~~~~~~~i~~GD~~----nD~~Mf~~~~~~-~~--g~~v~v~n~~ 291 (328)
.++.+++.+|+... .+..++.|++. .+-++|..+-+. +- .-.+.++..+
T Consensus 114 ~~~~~l~~~~l~~~-F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~ 169 (221)
T PRK10563 114 KMQHSLGKTGMLHY-FPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSS 169 (221)
T ss_pred HHHHHHHhcChHHh-CcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcH
Confidence 46777888888643 11245555432 466666554432 10 1256777764
No 223
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=81.46 E-value=8.1 Score=35.96 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=47.2
Q ss_pred HHHHhhhhCCCCcchHHHHHHhhcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHH
Q 020285 41 EKRAWIIRHPSALDMFHEITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY 119 (328)
Q Consensus 41 ~~~~w~~~~~~al~~~~~~~~~~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~ 119 (328)
-...|....-+.+.+. +.-...-..+-+|+||+|.||.....+ ..-..|...+.|.+|.+.+ .+++=|--+.+-+.
T Consensus 97 ~L~EW~v~~~~ev~~l-~~~~~~~~~phVIVfDlD~TLItd~~~--v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~ 173 (297)
T PF05152_consen 97 FLKEWYVQDYSEVYQL-KEESLVWEPPHVIVFDLDSTLITDEGD--VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVR 173 (297)
T ss_pred HHHHHhcCChhhhhhh-hhhhccCCCCcEEEEECCCcccccCCc--cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHH
Confidence 3567776633322221 111223456678999999999984321 1224567789999999996 55555665665555
Q ss_pred hh
Q 020285 120 DF 121 (328)
Q Consensus 120 ~~ 121 (328)
.-
T Consensus 174 ~s 175 (297)
T PF05152_consen 174 HS 175 (297)
T ss_pred HH
Confidence 43
No 224
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=80.14 E-value=1.4 Score=36.47 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
-|...++.+++.+|++++ ++++|||+..|+.+=+.+
T Consensus 102 P~~~~~~~~~~~~~~~~~---e~i~IGDs~~Di~~A~~~ 137 (147)
T TIGR01656 102 PKPGLILEALKRLGVDAS---RSLVVGDRLRDLQAARNA 137 (147)
T ss_pred CCHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHC
Confidence 467789999999999876 799999998886665554
No 225
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=80.12 E-value=1.9 Score=39.65 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCCc----CCHHHHHHHHhC-C--CceEEEEcCCC
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDDT----TDEDAFKILRKR-E--QGFGILVSKFP 291 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~~----nD~~Mf~~~~~~-~--~g~~v~v~n~~ 291 (328)
.-++.+++.+|+..- ...++.||+. -|-++|..+-+. + ..-.+.|+.+.
T Consensus 137 ~~~~~~l~~~gl~~~--Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~ 192 (260)
T PLN03243 137 RYLERAIEAVGMEGF--FSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSN 192 (260)
T ss_pred HHHHHHHHHcCCHhh--CcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCH
Confidence 456777888887642 1344555543 366776665432 1 12367777764
No 226
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=79.80 E-value=0.95 Score=39.83 Aligned_cols=14 Identities=36% Similarity=0.427 Sum_probs=12.3
Q ss_pred CEEEEEecCCcccC
Q 020285 67 QIVMFLDYDGTLSP 80 (328)
Q Consensus 67 ~~li~~D~DGTL~~ 80 (328)
-++++||+||||+.
T Consensus 6 ~~~iiFD~DGTL~d 19 (226)
T PRK13222 6 IRAVAFDLDGTLVD 19 (226)
T ss_pred CcEEEEcCCccccc
Confidence 45799999999997
No 227
>PLN02811 hydrolase
Probab=79.60 E-value=2.7 Score=37.14 Aligned_cols=59 Identities=12% Similarity=-0.013 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHcC---CCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCCC----CccceEEeCChhH
Q 020285 239 KGKALEFLLECLG---FADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK----KTSASYSLREPDE 305 (328)
Q Consensus 239 KG~al~~Ll~~lg---~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~~----~t~A~~~l~~~~~ 305 (328)
+-......++.++ ++++ ++++|||+..|+.+=+.+ |+ .|.|..... ...+++++.+..+
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~---~~v~IgDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~d~vi~~~~e 205 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPG---KVLVFEDAPSGVEAAKNA-----GMSVVMVPDPRLDKSYCKGADQVLSSLLD 205 (220)
T ss_pred CcHHHHHHHHHhCCCCCCcc---ceEEEeccHhhHHHHHHC-----CCeEEEEeCCCCcHhhhhchhhHhcCHhh
Confidence 4557788888886 8776 899999999998776665 44 556644321 1245566666654
No 228
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=79.42 E-value=5.4 Score=39.77 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=48.5
Q ss_pred HHHHHhh-cCCCEEEEEecCCcccCCC--CC-CC--------cccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhhC
Q 020285 57 HEITEAS-KGKQIVMFLDYDGTLSPIV--EN-PD--------RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 57 ~~~~~~~-~~k~~li~~D~DGTL~~~~--~~-p~--------~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~~ 123 (328)
..++.+. ...++++++|+|+||..-+ ++ -+ .+..-.+..+.|+.|.+++ -++|||=.....+.+.+.
T Consensus 211 ~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 211 ASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred HHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence 3455555 4467889999999999742 11 01 1123345677788888885 889999999999998764
Q ss_pred -cccc
Q 020285 124 -LAEL 127 (328)
Q Consensus 124 -~~~~ 127 (328)
.|.+
T Consensus 291 khp~M 295 (574)
T COG3882 291 KHPDM 295 (574)
T ss_pred hCCCe
Confidence 4443
No 229
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=79.32 E-value=5.6 Score=34.87 Aligned_cols=64 Identities=23% Similarity=0.459 Sum_probs=44.4
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHHHhCCCce-EEEEcCCCCC-----ccceEEeCChhHHHHHHHH
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGF-GILVSKFPKK-----TSASYSLREPDEVMDFLQK 312 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~~~~~~g~-~v~v~n~~~~-----t~A~~~l~~~~~V~~~L~~ 312 (328)
..-+.+++.+|++++ ++++|||+ .||+..-+.+ |+ +|.+...... ....+.+.+-.++...+..
T Consensus 158 ~~f~~~~~~~g~~p~---~~l~VgD~~~~di~gA~~~-----G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 158 EIFEYALEKLGVPPE---EALFVGDSLENDILGARAL-----GMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred HHHHHHHHHcCCCcc---eEEEECCChhhhhHHHHhc-----CcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 567899999999977 89999997 5785555554 44 5555543321 4566777777777776653
No 230
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=78.84 E-value=2.6 Score=36.57 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
+....+.+++.+|++++ ++++|||+..|+.+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~p~---~~l~vgD~~~di~aA~~a 177 (199)
T PRK09456 143 EARIYQHVLQAEGFSAA---DAVFFDDNADNIEAANAL 177 (199)
T ss_pred CHHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHc
Confidence 56778899999999887 899999998885554444
No 231
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=78.53 E-value=1.7 Score=36.90 Aligned_cols=27 Identities=22% Similarity=0.287 Sum_probs=18.6
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 104 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 104 (328)
+++||+||||+.. .+-...+++++.+.
T Consensus 1 ~iiFD~DGTL~ds---------~~~~~~~~~~~~~~ 27 (185)
T TIGR01990 1 AVIFDLDGVITDT---------AEYHYLAWKALADE 27 (185)
T ss_pred CeEEcCCCccccC---------hHHHHHHHHHHHHH
Confidence 3789999999983 13445666666655
No 232
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=78.50 E-value=2.9 Score=33.86 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHcC--CCCCCCceEEEEeCCcCCHHHHHH
Q 020285 238 DKGKALEFLLECLG--FADCSNVFPVYIGDDTTDEDAFKI 275 (328)
Q Consensus 238 ~KG~al~~Ll~~lg--~~~~~~~~~i~~GD~~nD~~Mf~~ 275 (328)
.|...+..+++.+| +.++ .+++|||+..|.+-++.
T Consensus 90 pkp~~~~~a~~~lg~~~~p~---~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPK---SILFVDDRPDNNEEVDY 126 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcc---eEEEECCCHhHHHHHHh
Confidence 57889999999999 8887 89999999998665543
No 233
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=77.79 E-value=2.1 Score=36.36 Aligned_cols=28 Identities=21% Similarity=0.280 Sum_probs=18.8
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 104 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 104 (328)
++++||+||||+... +....+++++.+.
T Consensus 2 ~~iiFD~DGTL~ds~---------~~~~~~~~~~~~~ 29 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA---------PLHAQAWKHLADK 29 (185)
T ss_pred CeEEEcCCCcccCCh---------HHHHHHHHHHHHH
Confidence 568999999999831 2344555555554
No 234
>PRK09449 dUMP phosphatase; Provisional
Probab=77.74 E-value=1.2 Score=39.31 Aligned_cols=49 Identities=16% Similarity=0.112 Sum_probs=26.4
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCC----cCCHHHHHHHHh-CCC---ceEEEEcCCC
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDD----TTDEDAFKILRK-REQ---GFGILVSKFP 291 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~----~nD~~Mf~~~~~-~~~---g~~v~v~n~~ 291 (328)
..++..++.+|+... . ..++.+++ .-|-++|..+-+ .+. .-.+.||...
T Consensus 122 ~~~~~~l~~~~l~~~-f-d~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~ 178 (224)
T PRK09449 122 ELQQVRLERTGLRDY-F-DLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNL 178 (224)
T ss_pred HHHHHHHHhCChHHH-c-CEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCc
Confidence 345667788887532 1 24445554 357777776443 221 1356666654
No 235
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=76.99 E-value=5.7 Score=35.65 Aligned_cols=15 Identities=27% Similarity=0.337 Sum_probs=12.9
Q ss_pred CCEEEEEecCCcccC
Q 020285 66 KQIVMFLDYDGTLSP 80 (328)
Q Consensus 66 k~~li~~D~DGTL~~ 80 (328)
+-++|+||+||||+.
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 346899999999998
No 236
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=76.77 E-value=5.7 Score=37.50 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
.|...+..+++.+|+..+ .+++|||+..|..+-+..
T Consensus 87 pk~~~i~~~~~~l~i~~~---~~vfidD~~~d~~~~~~~ 122 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTD---SFLFIDDNPAERANVKIT 122 (320)
T ss_pred chHHHHHHHHHHhCCCcC---cEEEECCCHHHHHHHHHH
Confidence 799999999999999887 799999999998877663
No 237
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=76.42 E-value=2.7 Score=37.59 Aligned_cols=56 Identities=18% Similarity=0.212 Sum_probs=38.7
Q ss_pred HHHHHHHHHHcCCC-CCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeCC
Q 020285 240 GKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLRE 302 (328)
Q Consensus 240 G~al~~Ll~~lg~~-~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~~ 302 (328)
-.|.++..+..|+. +. .+++|-||.+-+..=+.+ | -.++.|+.+.....++|.+.+
T Consensus 163 ~~afE~a~k~agi~~p~---~t~FfDDS~~NI~~ak~v---G-l~tvlv~~~~~~~~~d~~l~~ 219 (244)
T KOG3109|consen 163 EEAFEKAMKVAGIDSPR---NTYFFDDSERNIQTAKEV---G-LKTVLVGREHKIKGVDYALEQ 219 (244)
T ss_pred HHHHHHHHHHhCCCCcC---ceEEEcCchhhHHHHHhc---c-ceeEEEEeeecccchHHHHHH
Confidence 46789999999998 44 799999998876554444 2 247777765554455555543
No 238
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=76.38 E-value=1.4 Score=38.13 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
+....+.+++.+|++++ .+++|||+.+|+.+-+.+
T Consensus 150 ~~~~~~~~~~~~~~~p~---~~~~vgD~~~Di~~A~~~ 184 (198)
T TIGR01428 150 APQVYQLALEALGVPPD---EVLFVASNPWDLGGAKKF 184 (198)
T ss_pred CHHHHHHHHHHhCCChh---hEEEEeCCHHHHHHHHHC
Confidence 35678999999999887 799999999998776665
No 239
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=76.00 E-value=1.4 Score=43.90 Aligned_cols=29 Identities=21% Similarity=0.340 Sum_probs=19.0
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHH
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQL 101 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L 101 (328)
+.++||+||||+.. ...+.....++++++
T Consensus 242 k~vIFDlDGTLiDs-----~~~~~~a~~~~~~~~ 270 (459)
T PRK06698 242 QALIFDMDGTLFQT-----DKILELSLDDTFDHL 270 (459)
T ss_pred hheeEccCCceecc-----hhHHHHHHHHHHHHH
Confidence 67899999999983 233444445555544
No 240
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=75.95 E-value=1.6 Score=38.96 Aligned_cols=33 Identities=21% Similarity=0.080 Sum_probs=27.4
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
..-..-++.+|++++ .|++|.|+.+.+.+-+.+
T Consensus 146 d~yL~Aa~~Lgv~P~---~CvviEDs~~Gi~Aa~aA 178 (221)
T COG0637 146 DIYLLAAERLGVDPE---ECVVVEDSPAGIQAAKAA 178 (221)
T ss_pred HHHHHHHHHcCCChH---HeEEEecchhHHHHHHHC
Confidence 445666778899887 899999999999888876
No 241
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=75.79 E-value=4.1 Score=38.50 Aligned_cols=42 Identities=21% Similarity=0.179 Sum_probs=32.5
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-----CCEEEEc
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-----FPTAIVT 111 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-----~~v~I~S 111 (328)
..+..-|+||+||.|..- ..+-++..+||+.|.++ +|+++.|
T Consensus 32 s~~~fgfafDIDGVL~RG------~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 32 SPPTFGFAFDIDGVLFRG------HRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CCCceeEEEecccEEEec------CCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 445677999999999982 34667889999999876 3777776
No 242
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=74.97 E-value=8.5 Score=32.72 Aligned_cols=45 Identities=24% Similarity=0.173 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCc-CCHHHHHHHHhCCCce-EEEEcCC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKF 290 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~-nD~~Mf~~~~~~~~g~-~v~v~n~ 290 (328)
-+...+..+++.++++++ .+++|||+. +|+.+=+.+ |+ +|.|..+
T Consensus 92 P~p~~~~~~l~~~~~~~~---~~l~IGDs~~~Di~aA~~a-----Gi~~i~v~~g 138 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSE---QVAVVGDRLFTDVMGGNRN-----GSYTILVEPL 138 (170)
T ss_pred CChHHHHHHHHHcCCCHH---HEEEECCcchHHHHHHHHc-----CCeEEEEccC
Confidence 356789999999999876 799999997 797766655 44 5666543
No 243
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=74.48 E-value=12 Score=34.18 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=28.6
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHH
Q 020285 236 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDED 271 (328)
Q Consensus 236 ~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~ 271 (328)
|.+||.++..+++..|..++ .+|+|-|+.-.+.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk---~IIfIDD~~~nl~ 192 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPK---KIIFIDDNKENLK 192 (252)
T ss_pred CCccHHHHHHHHHHcCCCCC---eEEEEeCCHHHHH
Confidence 78999999999999999987 7999999854443
No 244
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=74.03 E-value=1.8 Score=37.77 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
......+++.+|++++ .+++|||...|+.+=+.+
T Consensus 155 p~~~~~~~~~~g~~~~---~~l~i~D~~~di~aA~~a 188 (211)
T TIGR02247 155 PRIYQLMLERLGVAPE---ECVFLDDLGSNLKPAAAL 188 (211)
T ss_pred HHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHc
Confidence 5578899999999886 799999999998776665
No 245
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=73.42 E-value=2.7 Score=34.61 Aligned_cols=36 Identities=28% Similarity=0.297 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
.+..+.+.+++.+|++++ .+++|||+..|+.+-+.+
T Consensus 134 p~~~~~~~~~~~~~~~p~---~~~~vgD~~~d~~~A~~~ 169 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPE---EILFVGDSPSDVEAAKEA 169 (176)
T ss_dssp TSHHHHHHHHHHHTSSGG---GEEEEESSHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCcc---eEEEEeCCHHHHHHHHHc
Confidence 456889999999999886 899999999998777765
No 246
>PRK08238 hypothetical protein; Validated
Probab=73.34 E-value=2.9 Score=41.95 Aligned_cols=41 Identities=27% Similarity=0.296 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP 291 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~ 291 (328)
.|... +.+.++- + .++++||+.+|++|++.+ |.+++|+..+
T Consensus 128 ~K~~~---l~~~l~~--~---~~~yvGDS~~Dlp~~~~A-----~~av~Vn~~~ 168 (479)
T PRK08238 128 AKAAA---LVEAFGE--R---GFDYAGNSAADLPVWAAA-----RRAIVVGASP 168 (479)
T ss_pred hHHHH---HHHHhCc--c---CeeEecCCHHHHHHHHhC-----CCeEEECCCH
Confidence 46544 4455552 2 478899999999999998 6789988664
No 247
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=72.63 E-value=4 Score=35.24 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=20.9
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCC----cCCHHHHHHHHh
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDD----TTDEDAFKILRK 278 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~----~nD~~Mf~~~~~ 278 (328)
..++.+++.+|+... . ..++.+|+ .-|-++|+.+-+
T Consensus 120 ~~~~~~l~~~gl~~~-f-d~i~~s~~~~~~KP~~~~~~~~~~ 159 (198)
T TIGR01428 120 AMLKSLVKHAGLDDP-F-DAVLSADAVRAYKPAPQVYQLALE 159 (198)
T ss_pred HHHHHHHHHCCChhh-h-heeEehhhcCCCCCCHHHHHHHHH
Confidence 346677788887532 1 23344333 357888877643
No 248
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=71.67 E-value=2.7 Score=46.32 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
-|+.-++-+.+..+. .+++|||+-||..|.+.+
T Consensus 781 QKA~Vv~lVk~~~~~------~TLAIGDGANDVsMIQ~A 813 (1151)
T KOG0206|consen 781 QKALVVKLVKKGLKA------VTLAIGDGANDVSMIQEA 813 (1151)
T ss_pred HHHHHHHHHHhcCCc------eEEEeeCCCccchheeeC
Confidence 688888888555443 699999999999999987
No 249
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=71.49 E-value=3.1 Score=36.02 Aligned_cols=36 Identities=11% Similarity=0.014 Sum_probs=20.6
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCC---cCCHHHHHHHH
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIGDD---TTDEDAFKILR 277 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~GD~---~nD~~Mf~~~~ 277 (328)
...++.+++.+|+... . ..++.+|+ .-+-++|..+-
T Consensus 133 ~~~~~~~l~~~gl~~~-f-~~~~~~~~~~~KP~p~~~~~~~ 171 (197)
T TIGR01548 133 RKDAAKFLTTHGLEIL-F-PVQIWMEDCPPKPNPEPLILAA 171 (197)
T ss_pred HHHHHHHHHHcCchhh-C-CEEEeecCCCCCcCHHHHHHHH
Confidence 3456788899988743 1 23444444 24566655543
No 250
>PLN02940 riboflavin kinase
Probab=71.43 E-value=2.2 Score=41.50 Aligned_cols=14 Identities=43% Similarity=0.496 Sum_probs=12.3
Q ss_pred CEEEEEecCCcccC
Q 020285 67 QIVMFLDYDGTLSP 80 (328)
Q Consensus 67 ~~li~~D~DGTL~~ 80 (328)
-++++||+||||+.
T Consensus 11 ik~VIFDlDGTLvD 24 (382)
T PLN02940 11 VSHVILDLDGTLLN 24 (382)
T ss_pred CCEEEECCcCcCCc
Confidence 46689999999998
No 251
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=70.76 E-value=8 Score=33.65 Aligned_cols=48 Identities=8% Similarity=0.255 Sum_probs=26.0
Q ss_pred cCCHHHHHHHHhC-C--CceEEEEcCCCCC----ccc---eEEeCChhHHHHHHHHHH
Q 020285 267 TTDEDAFKILRKR-E--QGFGILVSKFPKK----TSA---SYSLREPDEVMDFLQKLV 314 (328)
Q Consensus 267 ~nD~~Mf~~~~~~-~--~g~~v~v~n~~~~----t~A---~~~l~~~~~V~~~L~~l~ 314 (328)
.-|-++|..+-+. + ..-.+.|++.... ..| ...+.++++...-|.+++
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~~~l~~~~ 209 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDEEQAIHDLEKAT 209 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHHHHHHHHh
Confidence 4677788775432 1 1125666665421 111 223467777777777764
No 252
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=70.73 E-value=6.7 Score=32.93 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=28.9
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
....+.+++.+|++++ .+++|||+..|+.+=+.+
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~vgD~~~di~aA~~~ 176 (183)
T TIGR01509 143 PDIYLLALKKLGLKPE---ECLFVDDSPAGIEAAKAA 176 (183)
T ss_pred HHHHHHHHHHcCCCcc---eEEEEcCCHHHHHHHHHc
Confidence 5678899999999876 899999999997776665
No 253
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=70.59 E-value=1.9 Score=36.31 Aligned_cols=11 Identities=36% Similarity=0.751 Sum_probs=10.3
Q ss_pred EEEecCCcccC
Q 020285 70 MFLDYDGTLSP 80 (328)
Q Consensus 70 i~~D~DGTL~~ 80 (328)
++||+||||++
T Consensus 2 vlFDlDgtLv~ 12 (183)
T TIGR01509 2 ILFDLDGVLVD 12 (183)
T ss_pred eeeccCCceec
Confidence 78999999998
No 254
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=70.51 E-value=4.5 Score=34.40 Aligned_cols=15 Identities=27% Similarity=0.468 Sum_probs=12.8
Q ss_pred CCEEEEEecCCcccC
Q 020285 66 KQIVMFLDYDGTLSP 80 (328)
Q Consensus 66 k~~li~~D~DGTL~~ 80 (328)
+-++++||+||||+.
T Consensus 4 ~~~~viFD~DGTLiD 18 (188)
T PRK10725 4 RYAGLIFDMDGTILD 18 (188)
T ss_pred cceEEEEcCCCcCcc
Confidence 346789999999998
No 255
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=69.96 E-value=4.7 Score=33.13 Aligned_cols=27 Identities=30% Similarity=0.391 Sum_probs=17.7
Q ss_pred EEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc
Q 020285 69 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 104 (328)
Q Consensus 69 li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 104 (328)
+++||+||||++. . +-...+++++.+.
T Consensus 1 ~iifD~DGTL~d~-----~----~~~~~~~~~~~~~ 27 (154)
T TIGR01549 1 AILFDIDGTLVDS-----S----FAIRRAFEETLEE 27 (154)
T ss_pred CeEecCCCccccc-----H----HHHHHHHHHHHHH
Confidence 3789999999982 1 2345555555554
No 256
>PHA02597 30.2 hypothetical protein; Provisional
Probab=69.90 E-value=6.7 Score=33.78 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=12.2
Q ss_pred EEEEEecCCcccCC
Q 020285 68 IVMFLDYDGTLSPI 81 (328)
Q Consensus 68 ~li~~D~DGTL~~~ 81 (328)
++++||+||||+.+
T Consensus 3 k~viFDlDGTLiD~ 16 (197)
T PHA02597 3 PTILTDVDGVLLSW 16 (197)
T ss_pred cEEEEecCCceEch
Confidence 56899999999984
No 257
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=69.73 E-value=2.9 Score=36.76 Aligned_cols=48 Identities=19% Similarity=0.099 Sum_probs=28.7
Q ss_pred HHHHHHHcCCCCCCCceEEEEeCC---cCCHHHHHHHHhCC---CceEEEEcCCC
Q 020285 243 LEFLLECLGFADCSNVFPVYIGDD---TTDEDAFKILRKRE---QGFGILVSKFP 291 (328)
Q Consensus 243 l~~Ll~~lg~~~~~~~~~i~~GD~---~nD~~Mf~~~~~~~---~g~~v~v~n~~ 291 (328)
....++.+|+... .+.++..++- --|-.+|+.+-+.- ..-.+.|++..
T Consensus 128 ~~~~l~~~gl~~~-Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~~ 181 (229)
T COG1011 128 QERKLRQLGLLDY-FDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSL 181 (229)
T ss_pred HHHHHHHcCChhh-hheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEECCCh
Confidence 4566677776542 3456666663 24999999886632 12356677654
No 258
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=68.68 E-value=3.2 Score=35.80 Aligned_cols=49 Identities=16% Similarity=0.172 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeC--CcCCHHHHHHHHhCC--CceEEEEcCC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGD--DTTDEDAFKILRKRE--QGFGILVSKF 290 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD--~~nD~~Mf~~~~~~~--~g~~v~v~n~ 290 (328)
+.-..+..+++.+|+.. ..++.+. ...+.-+++.++..+ .+.-+.||.+
T Consensus 152 D~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg 204 (215)
T PF00702_consen 152 DNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDG 204 (215)
T ss_dssp SEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESS
T ss_pred ccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEEEccC
Confidence 34455688888999953 3455555 566653344444432 2445666654
No 259
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=68.61 E-value=10 Score=34.00 Aligned_cols=46 Identities=28% Similarity=0.348 Sum_probs=32.0
Q ss_pred EEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcC--CHHHHHHHHhC
Q 020285 231 IRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTT--DEDAFKILRKR 279 (328)
Q Consensus 231 I~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~n--D~~Mf~~~~~~ 279 (328)
..|.+--..-.||++|.+++.-.. +-++||+|+.| |.+.|+.+++.
T Consensus 72 ~~~rg~~qRn~AL~~ir~~~~~~~---~GVVyFADDdN~Ysl~lF~emR~i 119 (223)
T cd00218 72 LKPRGVEQRNLALRWIREHLSAKL---DGVVYFADDDNTYDLELFEEMRKI 119 (223)
T ss_pred CCcccHHHHHHHHHHHHhccccCc---ceEEEEccCCCcccHHHHHHHhcc
Confidence 344422234578888888764223 27999999988 88889998874
No 260
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=65.63 E-value=6.9 Score=33.82 Aligned_cols=14 Identities=29% Similarity=0.375 Sum_probs=11.9
Q ss_pred EEEEEecCCcccCC
Q 020285 68 IVMFLDYDGTLSPI 81 (328)
Q Consensus 68 ~li~~D~DGTL~~~ 81 (328)
++++||+||||++.
T Consensus 1 k~viFDlDGTL~d~ 14 (203)
T TIGR02252 1 KLITFDAVGTLLAL 14 (203)
T ss_pred CeEEEecCCceeee
Confidence 36899999999983
No 261
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=65.22 E-value=7.8 Score=32.97 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=22.3
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCC-------cCCHHHHHHHHh
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDD-------TTDEDAFKILRK 278 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~-------~nD~~Mf~~~~~ 278 (328)
..+..+++.+|+... .+.+++..|- .-|-++|+.+-+
T Consensus 109 ~~~~~~l~~~gl~~~-fd~i~~~~~~~~~~~~~KP~p~~~~~~~~ 152 (184)
T TIGR01993 109 AHARRALNRLGIEDC-FDGIFCFDTANPDYLLPKPSPQAYEKALR 152 (184)
T ss_pred HHHHHHHHHcCcHhh-hCeEEEeecccCccCCCCCCHHHHHHHHH
Confidence 356778888888642 2345555443 237778877644
No 262
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=64.70 E-value=7.5 Score=39.24 Aligned_cols=40 Identities=30% Similarity=0.281 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 289 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n 289 (328)
.|-.+++ +.+|.+.. . ++.||+.+|.+||+.+ +.+++|..
T Consensus 176 ~Kv~rl~---~~~g~~~~---~-~aYgDS~sD~plL~~a-----~e~y~V~~ 215 (497)
T PLN02177 176 HKRDAVL---KEFGDALP---D-LGLGDRETDHDFMSIC-----KEGYMVPR 215 (497)
T ss_pred HHHHHHH---HHhCCCCc---e-EEEECCccHHHHHHhC-----CccEEeCC
Confidence 3666665 55564432 3 8999999999999998 66788876
No 263
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=64.08 E-value=3.9 Score=35.46 Aligned_cols=48 Identities=6% Similarity=0.220 Sum_probs=27.3
Q ss_pred cCCHHHHHHHHhC-C--CceEEEEcCCCCC-c---c---ceEEeCChhHHHHHHHHHH
Q 020285 267 TTDEDAFKILRKR-E--QGFGILVSKFPKK-T---S---ASYSLREPDEVMDFLQKLV 314 (328)
Q Consensus 267 ~nD~~Mf~~~~~~-~--~g~~v~v~n~~~~-t---~---A~~~l~~~~~V~~~L~~l~ 314 (328)
.-|-++|+.+-+. + ..-.+.|++.+.. . . ....+.++..+.+.|+.++
T Consensus 141 KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~~~~ 198 (199)
T PRK09456 141 KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFAKVL 198 (199)
T ss_pred CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHHhcc
Confidence 4688888775432 1 1235777766422 1 1 1234567777888877654
No 264
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=63.42 E-value=11 Score=33.55 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=24.9
Q ss_pred cCCCC-CHHHHHHHHHHHcCCCCCCCceEEEEeCCcC--CHHHHHHHHhC
Q 020285 233 PKIEW-DKGKALEFLLECLGFADCSNVFPVYIGDDTT--DEDAFKILRKR 279 (328)
Q Consensus 233 p~~~~-~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~n--D~~Mf~~~~~~ 279 (328)
|. |+ ..-.||++|........ +-++||+|+.| |++.|+.++..
T Consensus 56 ~r-g~~qRn~AL~~ir~~~~~~~---~GVVyFaDDdNtYdl~LF~emR~~ 101 (207)
T PF03360_consen 56 PR-GVHQRNAALRWIRNNANHRL---DGVVYFADDDNTYDLRLFDEMRKT 101 (207)
T ss_dssp -T-SHHHHHHHHHHHHSTTTSSS----EEEEE--TTSEE-HHHHHHHCT-
T ss_pred cc-cHHHHHHHHHHHHhcccCCC---CcEEEECCCCCeeeHHHHHHHHhh
Confidence 44 44 34456777763322233 37999999988 99999998764
No 265
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=62.81 E-value=8.3 Score=35.01 Aligned_cols=43 Identities=30% Similarity=0.244 Sum_probs=33.1
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHHHhCCCceEEEEcCCC
Q 020285 242 ALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGFGILVSKFP 291 (328)
Q Consensus 242 al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~~~~~~g~~v~v~n~~ 291 (328)
--+..++.++..++ +++.+||+ .||...=+.+ | -.++.|.|+.
T Consensus 173 If~~al~~l~v~Pe---e~vhIgD~l~nD~~gA~~~---G-~~ailv~~~~ 216 (237)
T KOG3085|consen 173 IFQLALERLGVKPE---ECVHIGDLLENDYEGARNL---G-WHAILVDNSI 216 (237)
T ss_pred HHHHHHHHhCCChH---HeEEecCccccccHhHHHc---C-CEEEEEcccc
Confidence 45778899999987 89999997 6997665555 2 3588888754
No 266
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=62.42 E-value=25 Score=33.22 Aligned_cols=48 Identities=13% Similarity=0.067 Sum_probs=33.8
Q ss_pred eEEEEeCCc-CCHHHHHHHHhCCCceEEEEcCCC--CC-----ccceEEeCChhHHHHHH
Q 020285 259 FPVYIGDDT-TDEDAFKILRKREQGFGILVSKFP--KK-----TSASYSLREPDEVMDFL 310 (328)
Q Consensus 259 ~~i~~GD~~-nD~~Mf~~~~~~~~g~~v~v~n~~--~~-----t~A~~~l~~~~~V~~~L 310 (328)
.+++|||+. +|+.+=+.+ | -.+|+|..+. .+ -.++|++++..++..+|
T Consensus 265 ~~~mIGD~~~tDI~ga~~~---G-~~silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 265 ALYMVGDNPASDIIGAQNY---G-WFSCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred eEEEEcCChhhhhhhHHhC---C-ceEEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 799999996 998866655 1 3478887651 11 23678888888877765
No 267
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=62.00 E-value=6.9 Score=32.86 Aligned_cols=13 Identities=38% Similarity=0.560 Sum_probs=11.1
Q ss_pred EEEEecCCcccCC
Q 020285 69 VMFLDYDGTLSPI 81 (328)
Q Consensus 69 li~~D~DGTL~~~ 81 (328)
+|+||+||||+..
T Consensus 1 ~viFD~DGTL~D~ 13 (175)
T TIGR01493 1 AMVFDVYGTLVDV 13 (175)
T ss_pred CeEEecCCcCccc
Confidence 3789999999983
No 268
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=61.42 E-value=16 Score=35.14 Aligned_cols=36 Identities=22% Similarity=0.084 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
-|-..+..+++.+++.++ .+++|||+.+|+.+=+.+
T Consensus 105 P~p~~l~~a~~~l~v~~~---~svmIGDs~sDi~aAk~a 140 (354)
T PRK05446 105 PKTGLVEEYLAEGAIDLA---NSYVIGDRETDVQLAENM 140 (354)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHC
Confidence 456678888899998876 799999999997766655
No 269
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=60.99 E-value=4.9 Score=34.80 Aligned_cols=13 Identities=31% Similarity=0.608 Sum_probs=10.3
Q ss_pred EE-EEEecCCcccC
Q 020285 68 IV-MFLDYDGTLSP 80 (328)
Q Consensus 68 ~l-i~~D~DGTL~~ 80 (328)
++ |++|+||||++
T Consensus 2 ~i~I~iDiDgVLad 15 (191)
T PF06941_consen 2 KIRIAIDIDGVLAD 15 (191)
T ss_dssp -EEEEEESBTTTB-
T ss_pred CcEEEEECCCCCcc
Confidence 45 99999999998
No 270
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=60.76 E-value=4.5 Score=33.58 Aligned_cols=30 Identities=17% Similarity=-0.071 Sum_probs=24.1
Q ss_pred HHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHH
Q 020285 243 LEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 275 (328)
Q Consensus 243 l~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~ 275 (328)
....++.+|.+++ .+++|||+.+|..+...
T Consensus 104 ~~k~l~~l~~~p~---~~i~i~Ds~~~~~aa~~ 133 (148)
T smart00577 104 YVKDLSLLGRDLS---NVIIIDDSPDSWPFHPE 133 (148)
T ss_pred EeecHHHcCCChh---cEEEEECCHHHhhcCcc
Confidence 5666788888877 89999999999876543
No 271
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=60.64 E-value=8.3 Score=34.53 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
.+......+++.+|++++ ++++|||+..|+.+=+.+
T Consensus 153 P~p~~y~~i~~~lgv~p~---e~lfVgDs~~Di~AA~~A 188 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPR---EILFLSDIINELDAARKA 188 (220)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEEeCCHHHHHHHHHc
Confidence 356678999999999887 899999999887765554
No 272
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=60.48 E-value=6.2 Score=41.92 Aligned_cols=37 Identities=24% Similarity=0.298 Sum_probs=29.7
Q ss_pred eEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC---CCccceEEe
Q 020285 259 FPVYIGDDTTDEDAFKILRKREQGFGILVSKFP---KKTSASYSL 300 (328)
Q Consensus 259 ~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~---~~t~A~~~l 300 (328)
-+-+.||+.||-|+++.+ ..||+||=+. -+.+|+.+|
T Consensus 707 iVaVTGDGVNDsPALKKA-----DIGVAMGiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMIL 746 (1019)
T ss_pred EEEEeCCCcCCChhhccc-----ccceeeccccchHHHhhcceEE
Confidence 466889999999999998 6899997553 256788776
No 273
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=60.39 E-value=14 Score=38.23 Aligned_cols=79 Identities=13% Similarity=0.143 Sum_probs=47.7
Q ss_pred cCCCEEEEEecCCcccCCCCC----CC--cccCChHHHHHHHHHHhcC-CEEEEcCCChhhHH---hhh-CcccceEecC
Q 020285 64 KGKQIVMFLDYDGTLSPIVEN----PD--RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY---DFV-KLAELYYAGS 132 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~----p~--~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~---~~~-~~~~~~~i~~ 132 (328)
+-..++|+.|+|||++....- |- +.--...+...-.++.+++ +++.+|.|...... .++ .+...+.+--
T Consensus 527 kWn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LP 606 (738)
T KOG2116|consen 527 KWNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLP 606 (738)
T ss_pred ecCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCC
Confidence 445578999999999973100 00 0001223444555566675 89999999986543 344 2344456666
Q ss_pred CCceeeCCCC
Q 020285 133 HGMDIKGPTK 142 (328)
Q Consensus 133 nG~~i~~~~~ 142 (328)
.|=.|..|.+
T Consensus 607 dGPViLSPd~ 616 (738)
T KOG2116|consen 607 DGPVILSPDS 616 (738)
T ss_pred CCCEEeCCCc
Confidence 7777777765
No 274
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=59.85 E-value=17 Score=34.74 Aligned_cols=46 Identities=24% Similarity=0.367 Sum_probs=39.0
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcCCEEEEc
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVT 111 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~S 111 (328)
+++..||+=|+||.=.+-+.||-...|.+.-..|.++|. ..|++.|
T Consensus 5 ~~~nlLiVQDLDGVCmpLVkDPltR~ld~~Yv~A~~~l~--~~F~VLT 50 (389)
T TIGR02399 5 NTENLLIVQDLDGVCIPLVKDPLTRKLDSKYVFAVKNLE--KEFYVLT 50 (389)
T ss_pred CCCCeEEEecCCccchhhccCcccccCCHHHHHHHHHhc--CcEEEEe
Confidence 678899999999999999999988899999888888776 4555555
No 275
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.36 E-value=5.8 Score=28.28 Aligned_cols=28 Identities=29% Similarity=0.463 Sum_probs=23.7
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHH
Q 020285 241 KALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 275 (328)
Q Consensus 241 ~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~ 275 (328)
.-|+.|++.+| .+++|||-.-|++|++.
T Consensus 5 YDVqQlLK~~G-------~ivyfg~r~~~iemm~~ 32 (68)
T COG4483 5 YDVQQLLKKFG-------IIVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHHCC-------eeeecCCHHHHHHHHHH
Confidence 34788999988 49999999999999875
No 276
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=59.33 E-value=26 Score=31.60 Aligned_cols=18 Identities=22% Similarity=0.492 Sum_probs=15.6
Q ss_pred cCCCEEEEEecCCcccCC
Q 020285 64 KGKQIVMFLDYDGTLSPI 81 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~ 81 (328)
.+.++|++||+|-|+..-
T Consensus 10 ~~~ril~~FDFD~TIid~ 27 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQ 27 (256)
T ss_pred cCCcEEEEEecCceeecC
Confidence 458899999999999974
No 277
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=58.96 E-value=17 Score=37.27 Aligned_cols=57 Identities=12% Similarity=0.239 Sum_probs=44.5
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhCc
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVKL 124 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~~ 124 (328)
...+++++.||+++....- ...+-|++.++|++|++. .+++++||.+...+..+...
T Consensus 384 g~~~~~~~~~~~~~g~~~~--~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFAL--EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred CCEEEEEEECCEEEEEEEe--cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH
Confidence 4577888999998764311 125788999999999998 48999999999888877643
No 278
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=58.46 E-value=5.3 Score=36.18 Aligned_cols=14 Identities=29% Similarity=0.579 Sum_probs=12.2
Q ss_pred EEEEEecCCcccCC
Q 020285 68 IVMFLDYDGTLSPI 81 (328)
Q Consensus 68 ~li~~D~DGTL~~~ 81 (328)
+|++||+|+||+.-
T Consensus 1 ~LvvfDFD~TIvd~ 14 (234)
T PF06888_consen 1 ILVVFDFDHTIVDQ 14 (234)
T ss_pred CEEEEeCCCCccCC
Confidence 47899999999984
No 279
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=58.31 E-value=19 Score=31.07 Aligned_cols=23 Identities=9% Similarity=0.001 Sum_probs=18.3
Q ss_pred CCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 251 GFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 251 g~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
|++++ .+++|||+..|+..=+.+
T Consensus 127 gl~p~---e~l~VgDs~~di~aA~~a 149 (174)
T TIGR01685 127 VLKPA---QILFFDDRTDNVREVWGY 149 (174)
T ss_pred CCCHH---HeEEEcChhHhHHHHHHh
Confidence 57776 899999999997765544
No 280
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=57.34 E-value=32 Score=32.00 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=17.4
Q ss_pred hcCCCEEEEEecCCcccCCCCCCC
Q 020285 63 SKGKQIVMFLDYDGTLSPIVENPD 86 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~~~~p~ 86 (328)
.+..+.++++|.||-+...+.+|+
T Consensus 191 l~Ad~Li~lTDVdGVy~~dP~~~~ 214 (284)
T cd04256 191 LKADLLILLSDVDGLYDGPPGSDD 214 (284)
T ss_pred cCCCEEEEEeCCCeeecCCCCCCC
Confidence 366778889999999986443343
No 281
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=57.07 E-value=12 Score=34.65 Aligned_cols=36 Identities=8% Similarity=-0.092 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHcCCC-CCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~-~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
.....+...++.++.+ .+ .+++|||+.+|..+-+.+
T Consensus 252 p~p~~~~~~l~~~~~~~~~---~~~~vgD~~~d~~~a~~~ 288 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYD---VLLAVDDRDQVVDMWRRI 288 (300)
T ss_pred CcHHHHHHHHHHHhccCce---EEEEEcCcHHHHHHHHHh
Confidence 3444667777777773 34 799999999999998887
No 282
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=56.23 E-value=9.3 Score=33.38 Aligned_cols=15 Identities=47% Similarity=0.855 Sum_probs=13.3
Q ss_pred CCEEEEEecCCcccC
Q 020285 66 KQIVMFLDYDGTLSP 80 (328)
Q Consensus 66 k~~li~~D~DGTL~~ 80 (328)
++.++|+|+|||++-
T Consensus 2 kk~vi~sDFDGTITl 16 (220)
T COG4359 2 KKPVIFSDFDGTITL 16 (220)
T ss_pred CceEEEecCCCceEe
Confidence 577899999999986
No 283
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=53.75 E-value=11 Score=32.39 Aligned_cols=43 Identities=26% Similarity=0.161 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHHHhCCCceEEEEcC
Q 020285 240 GKALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGFGILVSK 289 (328)
Q Consensus 240 G~al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~~~~~~g~~v~v~n 289 (328)
+.|+++.++.++++.+ +++.+||. .||+=.=..+ | =++|.|..
T Consensus 96 ~~~fr~Al~~m~l~~~---~vvmVGDqL~TDVlggnr~---G-~~tIlV~P 139 (175)
T COG2179 96 GRAFRRALKEMNLPPE---EVVMVGDQLFTDVLGGNRA---G-MRTILVEP 139 (175)
T ss_pred HHHHHHHHHHcCCChh---HEEEEcchhhhhhhccccc---C-cEEEEEEE
Confidence 7889999999999988 89999998 5775322111 1 25788864
No 284
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=53.49 E-value=6.8 Score=43.35 Aligned_cols=60 Identities=17% Similarity=0.124 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCce-EEEEcCCCC-----CccceEEeCChhHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK-----KTSASYSLREPDEV 306 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~-~v~v~n~~~-----~t~A~~~l~~~~~V 306 (328)
+......+++.+|++++ ++++|||+.+|+.+=+.+ |+ .|.|..... ...|++++++..++
T Consensus 220 ~Pe~~~~a~~~lgv~p~---e~v~IgDs~~Di~AA~~a-----Gm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKILGVPTS---ECVVIEDALAGVQAARAA-----GMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHcCcCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 46778899999999887 799999999997766665 44 556654421 24677899988875
No 285
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=53.21 E-value=20 Score=39.82 Aligned_cols=15 Identities=33% Similarity=0.547 Sum_probs=13.0
Q ss_pred CCEEEEEecCCcccC
Q 020285 66 KQIVMFLDYDGTLSP 80 (328)
Q Consensus 66 k~~li~~D~DGTL~~ 80 (328)
+-+.++||+||||+.
T Consensus 74 ~ikaVIFDlDGTLiD 88 (1057)
T PLN02919 74 KVSAVLFDMDGVLCN 88 (1057)
T ss_pred CCCEEEECCCCCeEe
Confidence 446799999999998
No 286
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=50.97 E-value=36 Score=31.94 Aligned_cols=46 Identities=17% Similarity=0.069 Sum_probs=34.6
Q ss_pred EEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhh
Q 020285 70 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 121 (328)
Q Consensus 70 i~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~ 121 (328)
++||-||.|..-. ..-|.+.+++..|++.+ .+.++|--+....+++
T Consensus 25 fifDcDGVlW~g~------~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y 71 (306)
T KOG2882|consen 25 FIFDCDGVLWLGE------KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQY 71 (306)
T ss_pred EEEcCCcceeecC------CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHH
Confidence 8889999999831 24467888999998887 6888877666555544
No 287
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=50.13 E-value=29 Score=33.12 Aligned_cols=44 Identities=27% Similarity=0.400 Sum_probs=36.5
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcCCEEEEc
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVT 111 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~S 111 (328)
+..||+=|+||.=.+-+.||-...|.+.-..|.++|. ..|++.|
T Consensus 1 enlLivQDLDGVCm~LVkDPltR~ld~~Yv~A~~~l~--~~F~VLT 44 (381)
T PF09506_consen 1 ENLLIVQDLDGVCMPLVKDPLTRRLDPDYVRAARQLE--GHFYVLT 44 (381)
T ss_pred CCeeEEecCCccchhhccCccccccCHHHHHHHHHhc--CcEEEEe
Confidence 3578999999999999999988899998888888776 4555555
No 288
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=49.74 E-value=19 Score=29.78 Aligned_cols=60 Identities=23% Similarity=0.323 Sum_probs=38.3
Q ss_pred EEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCC--hhhHHhhhCcccceEecCCCceeeCCCC
Q 020285 70 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRC--RDKVYDFVKLAELYYAGSHGMDIKGPTK 142 (328)
Q Consensus 70 i~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~--~~~v~~~~~~~~~~~i~~nG~~i~~~~~ 142 (328)
-++|+||.|+.-.. ...++ .-+.++.+.+.+ |++|+|=-. .+.++++ ...-|+.+|.|..
T Consensus 46 AildL~G~~l~l~S---~R~~~--~~evi~~I~~~G~PviVAtDV~p~P~~V~Ki--------a~~f~A~ly~P~~ 108 (138)
T PF04312_consen 46 AILDLDGELLDLKS---SRNMS--RSEVIEWISEYGKPVIVATDVSPPPETVKKI--------ARSFNAVLYTPER 108 (138)
T ss_pred EEEecCCcEEEEEe---ecCCC--HHHHHHHHHHcCCEEEEEecCCCCcHHHHHH--------HHHhCCcccCCCC
Confidence 47899999997432 22233 457788888886 899998543 2344443 3334666777764
No 289
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=47.81 E-value=26 Score=37.52 Aligned_cols=53 Identities=21% Similarity=0.171 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC---CCccceEEeC
Q 020285 237 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP---KKTSASYSLR 301 (328)
Q Consensus 237 ~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~---~~t~A~~~l~ 301 (328)
.||-.-++-|.+. .+ -+.+-||+.||-|+|+.+ ..|.+||=+. .+++++.++-
T Consensus 725 ~DK~lLVk~L~~~----g~---VVAVTGDGTNDaPALkeA-----DVGlAMGIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 725 NDKHLLVKGLIKQ----GE---VVAVTGDGTNDAPALKEA-----DVGLAMGIAGTEVAKEASDIIIL 780 (1034)
T ss_pred chHHHHHHHHHhc----Cc---EEEEecCCCCCchhhhhc-----ccchhccccchhhhhhhCCeEEE
Confidence 3888888888732 11 567889999999999998 5788887653 3577888763
No 290
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=47.67 E-value=18 Score=30.67 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=26.0
Q ss_pred HHHHHHHHHHcC--CCCCCCceEEEEeCCc--------CCHHHHHHH
Q 020285 240 GKALEFLLECLG--FADCSNVFPVYIGDDT--------TDEDAFKIL 276 (328)
Q Consensus 240 G~al~~Ll~~lg--~~~~~~~~~i~~GD~~--------nD~~Mf~~~ 276 (328)
...+..+++.+| ++++ ++++|||+. +|+.+=+.+
T Consensus 111 p~~~~~~~~~~~~~~~~~---~~v~VGD~~~~~~~~~~~Di~aA~~a 154 (166)
T TIGR01664 111 TGMWEYLQSQYNSPIKMT---RSFYVGDAAGRKLDFSDADIKFAKNL 154 (166)
T ss_pred cHHHHHHHHHcCCCCCch---hcEEEECCCCCCCCCchhHHHHHHHC
Confidence 567889999998 7776 799999986 476554443
No 291
>TIGR00071 hisT_truA pseudouridylate synthase I. universal so far, single copy in all prokaryotes, 3 in yeast. Trusted cutoff for orthology is about 100 based on 1 match only in complete prokaryote with length 200.
Probab=47.64 E-value=23 Score=31.86 Aligned_cols=56 Identities=21% Similarity=0.361 Sum_probs=41.1
Q ss_pred CEEEEEecCCccc-CCCCCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 020285 67 QIVMFLDYDGTLS-PIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 67 ~~li~~D~DGTL~-~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 122 (328)
+..+.+=||||=. .+...|+...+..+..++|.++.....-++.+||.-..|-..-
T Consensus 2 ~~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~~ 58 (227)
T TIGR00071 2 KIALKIAYDGSNYHGWQRQPNKRTVQGELEKALEAIGKKKITIMSAGRTDKGVHAMG 58 (227)
T ss_pred eEEEEEEEcCCCeeEEeECcCCCCHHHHHHHHHHHHhCCCeeEEeeccCcCCccccc
Confidence 4568889999955 4554566667888888888888765445788999988776543
No 292
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=46.85 E-value=26 Score=32.04 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=21.5
Q ss_pred chHHHHHHhh-c-CCCEEEEEecCCcccCCC
Q 020285 54 DMFHEITEAS-K-GKQIVMFLDYDGTLSPIV 82 (328)
Q Consensus 54 ~~~~~~~~~~-~-~k~~li~~D~DGTL~~~~ 82 (328)
.+|+.+.++. + .+..+++||+|-||+...
T Consensus 5 ~s~~eV~~~~~~~~~~tLvvfDiDdTLi~~~ 35 (252)
T PF11019_consen 5 YSFHEVQDYLENADQDTLVVFDIDDTLITPK 35 (252)
T ss_pred cCHHHHHHHHHcCCCCeEEEEEcchhhhcCc
Confidence 4577775555 2 278999999999999753
No 293
>COG4996 Predicted phosphatase [General function prediction only]
Probab=46.28 E-value=42 Score=27.74 Aligned_cols=54 Identities=13% Similarity=0.081 Sum_probs=34.6
Q ss_pred EEEEecCCcccCCCCC-----CC--------------cccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhh
Q 020285 69 VMFLDYDGTLSPIVEN-----PD--------------RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 69 li~~D~DGTL~~~~~~-----p~--------------~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~ 122 (328)
+|+||.||||..+-+= |- .-.+-+.+++.++.+++.+ .+..+|=.-..+..+.+
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aL 75 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKAL 75 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHH
Confidence 6899999999975210 10 1124567788888777775 55666766666655544
No 294
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=45.68 E-value=28 Score=31.19 Aligned_cols=35 Identities=23% Similarity=0.062 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHcCCCCCCCceE-EEEeCCc-CCHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFP-VYIGDDT-TDEDAFKIL 276 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~-i~~GD~~-nD~~Mf~~~ 276 (328)
+-.-++.+++.++++.+ .+ ++|||+. +|+.+=+.+
T Consensus 190 ~~~~~~~~~~~~~~~~~---~~~~~IGD~~~~Di~~A~~~ 226 (236)
T TIGR01460 190 SPAIYRAALNLLQARPE---RRDVMVGDNLRTDILGAKNA 226 (236)
T ss_pred CHHHHHHHHHHhCCCCc---cceEEECCCcHHHHHHHHHC
Confidence 55677889999998765 45 9999997 898865554
No 295
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=44.33 E-value=45 Score=31.54 Aligned_cols=44 Identities=25% Similarity=0.409 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHc-CCCCCCCceEEEEeCCcC--CHHHHHHHHhCCCceEE
Q 020285 239 KGKALEFLLECL-GFADCSNVFPVYIGDDTT--DEDAFKILRKREQGFGI 285 (328)
Q Consensus 239 KG~al~~Ll~~l-g~~~~~~~~~i~~GD~~n--D~~Mf~~~~~~~~g~~v 285 (328)
.-.|+++|..+. +. +..+-++||+||.| |++.|+-++... .+|+
T Consensus 164 Rn~aL~~ir~~~~~~--~~~~GVVyFADDdN~YdleLF~eiR~v~-~~gv 210 (330)
T KOG1476|consen 164 RNMALRWIRSRILRH--HKLEGVVYFADDDNTYDLELFEEIRNVK-KFGV 210 (330)
T ss_pred HHHHHHHHHHhcccc--cccceEEEEccCCcchhHHHHHHHhccc-eeee
Confidence 456777777443 22 12237999999988 888899887653 3443
No 296
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=44.27 E-value=15 Score=37.07 Aligned_cols=15 Identities=33% Similarity=0.288 Sum_probs=12.4
Q ss_pred CEEEEEecCCcccCC
Q 020285 67 QIVMFLDYDGTLSPI 81 (328)
Q Consensus 67 ~~li~~D~DGTL~~~ 81 (328)
...++||+||||+..
T Consensus 22 ~~~~~FDfDGTLt~~ 36 (497)
T PLN02177 22 NQTVAADLDGTLLIS 36 (497)
T ss_pred ccEEEEecCCcccCC
Confidence 345899999999983
No 297
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=44.23 E-value=7.6 Score=27.54 Aligned_cols=27 Identities=30% Similarity=0.550 Sum_probs=17.1
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHH
Q 020285 242 ALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 275 (328)
Q Consensus 242 al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~ 275 (328)
=|+.|++++|+ +||+||-.-|++|++.
T Consensus 6 DVqQLLK~fG~-------~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 6 DVQQLLKKFGI-------IIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHHTTS------------S-HHHHHHHHHH
T ss_pred HHHHHHHHCCE-------EEEeCChHHHHHHHHH
Confidence 36788888874 8999999999999754
No 298
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=44.12 E-value=9.4 Score=38.50 Aligned_cols=65 Identities=22% Similarity=0.293 Sum_probs=42.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEE-eC-Chh
Q 020285 229 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYS-LR-EPD 304 (328)
Q Consensus 229 lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~-l~-~~~ 304 (328)
-|..|. +|-..++.-... .. .+...||+.||-|++..+ ..|++|.++.. +++|+.+ ++ +|.
T Consensus 491 AeatPE---dK~~~I~~eQ~~----gr---lVAMtGDGTNDAPALAqA-----dVg~AMNsGTqAAkEAaNMVDLDS~PT 555 (681)
T COG2216 491 AEATPE---DKLALIRQEQAE----GR---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMVDLDSNPT 555 (681)
T ss_pred hcCChH---HHHHHHHHHHhc----Cc---EEEEcCCCCCcchhhhhc-----chhhhhccccHHHHHhhcccccCCCcc
Confidence 345555 566655554332 22 688999999999999887 68999988753 4556654 33 555
Q ss_pred HHHH
Q 020285 305 EVMD 308 (328)
Q Consensus 305 ~V~~ 308 (328)
-+++
T Consensus 556 Klie 559 (681)
T COG2216 556 KLIE 559 (681)
T ss_pred ceeh
Confidence 4433
No 299
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit.
Probab=43.86 E-value=76 Score=28.77 Aligned_cols=62 Identities=15% Similarity=0.092 Sum_probs=36.9
Q ss_pred hHHHHHHhhcCCCEEEEEec-CCcccCC----CC-CCCcccCChHHHHHHHHHHhcC-CEEEEcCCChh
Q 020285 55 MFHEITEASKGKQIVMFLDY-DGTLSPI----VE-NPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRD 116 (328)
Q Consensus 55 ~~~~~~~~~~~k~~li~~D~-DGTL~~~----~~-~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~ 116 (328)
.+.++...+-+.++++.+|+ +|.+.+. +. +.-.........+.++++.+.+ ..+++|+++..
T Consensus 112 ~~~~~~~~~~~~~iv~slD~~~g~~~~~~~~~v~i~gw~~~~~~~~~~~~~~l~~~G~~~iivt~i~~~ 180 (254)
T TIGR00735 112 LIYELADRFGSQCIVVAIDAKRVYVNSYCWYEVYIYGGRESTGLDAVEWAKEVEKLGAGEILLTSMDKD 180 (254)
T ss_pred HHHHHHHHcCCCCEEEEEEeccCCCCCCccEEEEEeCCcccCCCCHHHHHHHHHHcCCCEEEEeCcCcc
Confidence 45566666644677888895 5654320 00 0001123445677888888774 88888998874
No 300
>PTZ00489 glutamate 5-kinase; Provisional
Probab=43.57 E-value=89 Score=28.78 Aligned_cols=18 Identities=28% Similarity=0.423 Sum_probs=14.7
Q ss_pred cCCCEEEEEecCCcccCC
Q 020285 64 KGKQIVMFLDYDGTLSPI 81 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~ 81 (328)
+....++++|.||-+...
T Consensus 161 ~Ad~LiilTDVdGVy~~d 178 (264)
T PTZ00489 161 KADLLVILSDIDGYYTEN 178 (264)
T ss_pred CCCEEEEeeccCeeEcCC
Confidence 667788899999999753
No 301
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=43.52 E-value=72 Score=27.70 Aligned_cols=78 Identities=18% Similarity=0.101 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhhCC----CeEEEe-cC-eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 203 WNDLAQKVKEVVNEYP----QLNWRQ-GR-MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 203 ~~~~~~~v~~~l~~~~----~l~~~~-g~-~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
.....+.+.+.|+... ++.+.. .+ ...+.|-+ |.--++..++.++++.. ..++|||..+|+..=..+
T Consensus 69 f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP----~~gm~~~~~~~~~iD~~---~s~~VGD~~~Dlq~a~n~ 141 (181)
T COG0241 69 FDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKP----KPGMLLSALKEYNIDLS---RSYVVGDRLTDLQAAENA 141 (181)
T ss_pred HHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCC----ChHHHHHHHHHhCCCcc---ceEEecCcHHHHHHHHHC
Confidence 3444455666666542 222221 11 12444544 44456777778888876 799999999997655444
Q ss_pred HhCCCceEEEEcCCC
Q 020285 277 RKREQGFGILVSKFP 291 (328)
Q Consensus 277 ~~~~~g~~v~v~n~~ 291 (328)
+-. ++.+.+..
T Consensus 142 ---gi~-~~~~~~~~ 152 (181)
T COG0241 142 ---GIK-GVLVLTGI 152 (181)
T ss_pred ---CCC-ceEEEcCc
Confidence 333 66665543
No 302
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=43.07 E-value=22 Score=34.58 Aligned_cols=48 Identities=21% Similarity=0.273 Sum_probs=31.9
Q ss_pred cCCCEEEEEecCCcccCCCC------CCCc-ccCChHHHHHHHHHHhcC-CEEEEc
Q 020285 64 KGKQIVMFLDYDGTLSPIVE------NPDR-AFMSGKMRRAVRQLAKYF-PTAIVT 111 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~------~p~~-~~is~~~~~aL~~L~~~~-~v~I~S 111 (328)
++..+++.|||||||..... .|.+ ..+.++.-.-|+.|.+.+ .++|-|
T Consensus 72 ~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~ift 127 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFT 127 (422)
T ss_pred CCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEe
Confidence 66778899999999997422 1222 235556666778887774 566654
No 303
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=40.63 E-value=62 Score=28.82 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=36.9
Q ss_pred hhcCCCEEEEEecCCcccCCCC-CCCccc---CC-hHHH---------HHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 62 ASKGKQIVMFLDYDGTLSPIVE-NPDRAF---MS-GKMR---------RAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~~~-~p~~~~---is-~~~~---------~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
..+.++.++++|.||-+...+. .|+... ++ +++. .+++.+.+. .+++|+.|+....+.+++
T Consensus 144 ~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l 219 (229)
T cd04239 144 EIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGLKVMDATALTLCRRNKIPIIVFNGLKPGNLLRAL 219 (229)
T ss_pred HcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhcCCccHHHHHHHHHCCCeEEEECCCChhHHHHHH
Confidence 3466778889999999975321 122221 22 1221 233334444 489999999888887766
No 304
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=40.25 E-value=22 Score=37.96 Aligned_cols=28 Identities=29% Similarity=0.414 Sum_probs=23.2
Q ss_pred eEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC
Q 020285 259 FPVYIGDDTTDEDAFKILRKREQGFGILVSKFP 291 (328)
Q Consensus 259 ~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~ 291 (328)
.++..||+.||..+++.+ ..||+.=|++
T Consensus 808 ~TLMCGDGTNDVGALK~A-----hVGVALL~~~ 835 (1160)
T KOG0209|consen 808 VTLMCGDGTNDVGALKQA-----HVGVALLNNP 835 (1160)
T ss_pred EEEEecCCCcchhhhhhc-----ccceehhcCC
Confidence 589999999999999998 5777765554
No 305
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=39.33 E-value=26 Score=38.02 Aligned_cols=71 Identities=25% Similarity=0.392 Sum_probs=46.9
Q ss_pred cCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCCCccceEEeC--C
Q 020285 225 GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLR--E 302 (328)
Q Consensus 225 g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~~t~A~~~l~--~ 302 (328)
|.-+--..|- .|..-++.+. .+|+ .+-+.||+-||=.+++++ ..||..+.+...-+|.|.-. +
T Consensus 830 ~~VfARMsP~---qK~~Lie~lQ-kl~y------~VgfCGDGANDCgALKaA-----dvGISLSeaEASvAApFTSk~~~ 894 (1140)
T KOG0208|consen 830 GTVFARMSPD---QKAELIEALQ-KLGY------KVGFCGDGANDCGALKAA-----DVGISLSEAEASVAAPFTSKTPS 894 (1140)
T ss_pred CeEEeecCch---hHHHHHHHHH-hcCc------EEEecCCCcchhhhhhhc-----ccCcchhhhhHhhcCccccCCCc
Confidence 3334445565 5777666654 4555 488999999999999998 56888877654456666543 4
Q ss_pred hhHHHHHH
Q 020285 303 PDEVMDFL 310 (328)
Q Consensus 303 ~~~V~~~L 310 (328)
-..|...|
T Consensus 895 I~cVp~vI 902 (1140)
T KOG0208|consen 895 ISCVPDVI 902 (1140)
T ss_pred hhhHhHHH
Confidence 44555544
No 306
>PLN02458 transferase, transferring glycosyl groups
Probab=39.02 E-value=50 Score=31.43 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCcC--CHHHHHHHHhC
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDDTT--DEDAFKILRKR 279 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~~n--D~~Mf~~~~~~ 279 (328)
.-.||++|.+.. + + -++||+|+.| |++.|+.++..
T Consensus 190 RN~AL~~IR~h~-l--~---GVVyFADDdNtYsl~LFeEmR~i 226 (346)
T PLN02458 190 RNLALRHIEHHK-L--S---GIVHFAGLSNVYDLDFFDEIRDI 226 (346)
T ss_pred HHHHHHHHHhcC-c--C---ceEEEccCCCcccHHHHHHHhcC
Confidence 457888887653 2 2 6999999988 88889998764
No 307
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=38.18 E-value=29 Score=28.26 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=28.3
Q ss_pred cCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 89 FMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
.+.+.+.+.|++|+++ .+++|+|+.+...+...+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l 111 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVL 111 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccc
Confidence 4567899999999977 699999999988776654
No 308
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=37.71 E-value=18 Score=35.68 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=14.3
Q ss_pred cCCCEEEEEecCCcccC
Q 020285 64 KGKQIVMFLDYDGTLSP 80 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~ 80 (328)
+..++++++|+|||++.
T Consensus 372 r~n~kiVVsDiDGTITk 388 (580)
T COG5083 372 RNNKKIVVSDIDGTITK 388 (580)
T ss_pred eCCCcEEEEecCCcEEe
Confidence 45567899999999997
No 309
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=37.57 E-value=81 Score=33.44 Aligned_cols=59 Identities=22% Similarity=0.284 Sum_probs=37.2
Q ss_pred hcCCCEEEEEecCCcccCCCCCCCcc-------------------------cCChHHHHHHHHHHhc-CCEEEEcCCChh
Q 020285 63 SKGKQIVMFLDYDGTLSPIVENPDRA-------------------------FMSGKMRRAVRQLAKY-FPTAIVTGRCRD 116 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~~~~p~~~-------------------------~is~~~~~aL~~L~~~-~~v~I~SGR~~~ 116 (328)
.+....++++|.||-+.....+|+.. -|-++...+. .+.+. .+++|++|+...
T Consensus 180 l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~aa~-~a~~~gi~v~I~~g~~~~ 258 (715)
T TIGR01092 180 LKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVKAAV-WAAYGGTPVIIASGTAPK 258 (715)
T ss_pred cCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHHHHH-HHHHCCCeEEEeCCCCcc
Confidence 36677888999999987643222211 1323333333 33344 589999999888
Q ss_pred hHHhhh
Q 020285 117 KVYDFV 122 (328)
Q Consensus 117 ~v~~~~ 122 (328)
.+.+++
T Consensus 259 ~l~~~l 264 (715)
T TIGR01092 259 NITKVV 264 (715)
T ss_pred hHHHHh
Confidence 888876
No 310
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=37.07 E-value=29 Score=31.44 Aligned_cols=17 Identities=24% Similarity=0.389 Sum_probs=15.1
Q ss_pred EEEEeCCcCCHHHHHHH
Q 020285 260 PVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 260 ~i~~GD~~nD~~Mf~~~ 276 (328)
+++|||+.+|+.+.+.+
T Consensus 187 ~I~IGDs~~Di~aA~~A 203 (237)
T PRK11009 187 RIFYGDSDNDITAAREA 203 (237)
T ss_pred eEEEcCCHHHHHHHHHc
Confidence 88999999999887776
No 311
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=36.81 E-value=1.1e+02 Score=27.97 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=15.4
Q ss_pred hcCCCEEEEEecCCcccCC
Q 020285 63 SKGKQIVMFLDYDGTLSPI 81 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~ 81 (328)
.+....++++|.||-+...
T Consensus 167 l~Ad~liilTDVdGVy~~d 185 (266)
T PRK12314 167 VKADLLIILSDIDGLYDKN 185 (266)
T ss_pred hCCCEEEEEeCCCcccCCC
Confidence 3667788899999999764
No 312
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=36.67 E-value=27 Score=29.47 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh---CcccceEecC
Q 020285 92 GKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV---KLAELYYAGS 132 (328)
Q Consensus 92 ~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~---~~~~~~~i~~ 132 (328)
+++.+.|+.+++. .+++|+||-+...+..+. +++...++|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~ 136 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGN 136 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEE
Confidence 5666899998777 599999999998888875 5554334443
No 313
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=36.45 E-value=1.3e+02 Score=23.40 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHHHh
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRK 278 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~~~ 278 (328)
.|-..|+.+++.+.-. ..|.|||| .-|.+....+.+
T Consensus 50 ~K~~~i~~i~~~fP~~-----kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 50 HKRDNIERILRDFPER-----KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHHCCCC-----cEEEEeeCCCcCHHHHHHHHH
Confidence 7999999999987433 58999996 789988777644
No 314
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=36.38 E-value=89 Score=25.67 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=37.6
Q ss_pred EEEEEecCCcccCCCCCCC----cccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHh
Q 020285 68 IVMFLDYDGTLSPIVENPD----RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYD 120 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~----~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~ 120 (328)
+++.+|+|+|+.|...++. .-.+-+..+..|..|.+.+ ..+++|--+...+..
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~ 76 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIAS 76 (144)
T ss_pred EEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHH
Confidence 6788999999998754432 1235567788999999995 777777666655443
No 315
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=35.97 E-value=4.3e+02 Score=26.38 Aligned_cols=113 Identities=12% Similarity=0.042 Sum_probs=55.7
Q ss_pred CCcEEEecCcEEEEEcCCC---ChhhHHHHHHHHHHHHhhCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCC
Q 020285 180 PGARVENNKFCISVHFRCV---DEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCS 256 (328)
Q Consensus 180 ~g~~ie~~~~~~~~~~r~~---~~~~~~~~~~~v~~~l~~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~ 256 (328)
+|.+-+.++-.+..+.+.+ .....+.+.+.+..+-..+|.+++.- +...-+ |-+=+.-|-..++..+-..+-
T Consensus 120 EGlFd~~~KkpLP~~p~~IGVITS~tgAairDIl~~~~rR~P~~~viv----~pt~VQ-G~~A~~eIv~aI~~an~~~~~ 194 (440)
T COG1570 120 EGLFDPERKKPLPFFPKKIGVITSPTGAALRDILHTLSRRFPSVEVIV----YPTLVQ-GEGAAEEIVEAIERANQRGDV 194 (440)
T ss_pred CCCcChhhcCCCCCCCCeEEEEcCCchHHHHHHHHHHHhhCCCCeEEE----Eecccc-CCCcHHHHHHHHHHhhccCCC
Confidence 5777666544443333332 12223445455555556788765321 122223 333333333334444333323
Q ss_pred CceEEEEeCC-------cCCHHHHHHHHhCCCceEE--EEcCCCCCccceEE
Q 020285 257 NVFPVYIGDD-------TTDEDAFKILRKREQGFGI--LVSKFPKKTSASYS 299 (328)
Q Consensus 257 ~~~~i~~GD~-------~nD~~Mf~~~~~~~~g~~v--~v~n~~~~t~A~~~ 299 (328)
|+.+++=|-+ .|||.+-+++-.. ..+| +||...+-|.++|+
T Consensus 195 DvlIVaRGGGSiEDLW~FNdE~vaRAi~~s--~iPvISAVGHEtD~tL~DfV 244 (440)
T COG1570 195 DVLIVARGGGSIEDLWAFNDEIVARAIAAS--RIPVISAVGHETDFTLADFV 244 (440)
T ss_pred CEEEEecCcchHHHHhccChHHHHHHHHhC--CCCeEeecccCCCccHHHhh
Confidence 3334443432 4999998888654 3444 66776665655554
No 316
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=35.92 E-value=62 Score=27.13 Aligned_cols=37 Identities=19% Similarity=0.093 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHH
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~ 276 (328)
-|-..++.|++.+.-. ...++++||+..+|..+++.+
T Consensus 102 ~K~~~l~~i~~~~~~~--~~~f~~~~gn~~~D~~~y~~~ 138 (157)
T smart00775 102 FKIACLRDIKSLFPPQ--GNPFYAGFGNRITDVISYSAV 138 (157)
T ss_pred HHHHHHHHHHHhcCCC--CCCEEEEeCCCchhHHHHHHc
Confidence 4888999999876422 122677899999999999987
No 317
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=35.51 E-value=47 Score=28.62 Aligned_cols=35 Identities=9% Similarity=0.054 Sum_probs=28.6
Q ss_pred cCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 89 FMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
.+-+.+.++|+.|+++ .+++|+|+.+...+..++.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~ 120 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLE 120 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 3556789999999988 5999999999887777653
No 318
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=35.37 E-value=1e+02 Score=29.23 Aligned_cols=70 Identities=24% Similarity=0.281 Sum_probs=42.5
Q ss_pred HHHHhhcCCCEEEEEe----cCCcccCCCCCCCcccCChHHHHHHHHHHhc-CC-----------EEEEcCCChhhHHhh
Q 020285 58 EITEASKGKQIVMFLD----YDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FP-----------TAIVTGRCRDKVYDF 121 (328)
Q Consensus 58 ~~~~~~~~k~~li~~D----~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~-----------v~I~SGR~~~~v~~~ 121 (328)
++.++.+.+.+++++| +||-+.| ++-|-+|+++ +- |.=.|||...+....
T Consensus 185 ~l~~a~k~r~klv~TDg~FSMDGdiaP--------------l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~v 250 (417)
T KOG1359|consen 185 CLISACKMRLKLVVTDGVFSMDGDIAP--------------LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGV 250 (417)
T ss_pred HHHHhhhheEEEEEecceeccCCCccc--------------HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCC
Confidence 4455557788888765 7777776 3455666665 32 223488988877665
Q ss_pred hCccc-------ceEecCCCceeeCCC
Q 020285 122 VKLAE-------LYYAGSHGMDIKGPT 141 (328)
Q Consensus 122 ~~~~~-------~~~i~~nG~~i~~~~ 141 (328)
++..+ -.+-|.+|.++-.|.
T Consensus 251 m~~vdiinsTLgKAlGga~GGyttgp~ 277 (417)
T KOG1359|consen 251 MGDVDIINSTLGKALGGASGGYTTGPK 277 (417)
T ss_pred CCcceehhhhhhhhhcCCCCCCccCCh
Confidence 54322 134557777766553
No 319
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=34.93 E-value=33 Score=34.61 Aligned_cols=23 Identities=22% Similarity=0.057 Sum_probs=16.3
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHH
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMR 95 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~ 95 (328)
.-+++|+||||+.. ....+.-++
T Consensus 9 ~~~~fD~DGTLlrs-----~ssFpyFml 31 (498)
T PLN02499 9 YSVVSELEGTLLKD-----ADPFSYFML 31 (498)
T ss_pred ceEEEecccceecC-----CCccHHHHH
Confidence 44889999999982 234556666
No 320
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=34.23 E-value=1e+02 Score=28.43 Aligned_cols=58 Identities=22% Similarity=0.186 Sum_probs=39.9
Q ss_pred CCCEEEEEecCCcccCCCCC---------------------CCcccCChHHHHHHHHHHhcC-------CEEEEcCCChh
Q 020285 65 GKQIVMFLDYDGTLSPIVEN---------------------PDRAFMSGKMRRAVRQLAKYF-------PTAIVTGRCRD 116 (328)
Q Consensus 65 ~k~~li~~D~DGTL~~~~~~---------------------p~~~~is~~~~~aL~~L~~~~-------~v~I~SGR~~~ 116 (328)
..+.=|+||-|++|...... |-..-+-...+..|.+|++.+ +++|+|.|+..
T Consensus 119 ~~qlRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~ap 198 (264)
T PF06189_consen 119 DDQLRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAP 198 (264)
T ss_pred CCceEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCc
Confidence 56677999999999984211 112223346677888887651 58999999998
Q ss_pred hHHhhh
Q 020285 117 KVYDFV 122 (328)
Q Consensus 117 ~v~~~~ 122 (328)
.-.+.+
T Consensus 199 ah~RvI 204 (264)
T PF06189_consen 199 AHERVI 204 (264)
T ss_pred hhHHHH
Confidence 766554
No 321
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=34.17 E-value=1e+02 Score=32.74 Aligned_cols=58 Identities=22% Similarity=0.391 Sum_probs=36.2
Q ss_pred cCCCEEEEEecCCcccCCCCCCCcc-------------------------cCChHHHHHHHHHHhc-CCEEEEcCCChhh
Q 020285 64 KGKQIVMFLDYDGTLSPIVENPDRA-------------------------FMSGKMRRAVRQLAKY-FPTAIVTGRCRDK 117 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~~~p~~~-------------------------~is~~~~~aL~~L~~~-~~v~I~SGR~~~~ 117 (328)
+....++++|.||-+.....+|+.. -|.++...+.. +.+. .+++|++|+....
T Consensus 189 ~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~~Kl~Aa~~-a~~~Gi~v~I~~g~~~~~ 267 (718)
T PLN02418 189 KADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMTAKVKAAVN-AASAGIPVVITSGYALDN 267 (718)
T ss_pred CCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCCcHHHHHHHHH-HHHCCCcEEEeCCCCcch
Confidence 6677888999999987643322211 12222233333 3334 5899999998888
Q ss_pred HHhhh
Q 020285 118 VYDFV 122 (328)
Q Consensus 118 v~~~~ 122 (328)
+.+++
T Consensus 268 l~~~l 272 (718)
T PLN02418 268 IRKVL 272 (718)
T ss_pred HHHHh
Confidence 88776
No 322
>PRK14558 pyrH uridylate kinase; Provisional
Probab=33.98 E-value=95 Score=27.68 Aligned_cols=60 Identities=13% Similarity=0.121 Sum_probs=36.5
Q ss_pred hcCCCEEEEEecCCcccCCCC-CCCccc---CC-hHHH---------HHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 63 SKGKQIVMFLDYDGTLSPIVE-NPDRAF---MS-GKMR---------RAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~~~-~p~~~~---is-~~~~---------~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
.+.+..++++|.||-....+. +|+... ++ .++. .+++-+.+. .++.|++|+....+..++
T Consensus 145 l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l 219 (231)
T PRK14558 145 MKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKMGLKVMDTEAFSICKKYGITILVINFFEPGNLLKAL 219 (231)
T ss_pred cCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHcCcccccHHHHHHHHHCCCCEEEEeCCCCCHHHHHH
Confidence 366788889999999986432 233222 22 1111 223323344 589999999877777765
No 323
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=33.91 E-value=1.8e+02 Score=25.53 Aligned_cols=54 Identities=11% Similarity=0.169 Sum_probs=41.0
Q ss_pred HHHHhhcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhhCc
Q 020285 58 EITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKL 124 (328)
Q Consensus 58 ~~~~~~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~~~ 124 (328)
++.........+|++.+.|. ++.+.++++.+.+.+ +++.+||.+...+.++++.
T Consensus 102 ql~~~~~~gDvli~iS~SG~-------------s~~v~~a~~~Ak~~G~~vI~IT~~~~s~l~~l~~~ 156 (196)
T PRK10886 102 QVRALGHAGDVLLAISTRGN-------------SRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGP 156 (196)
T ss_pred HHHHcCCCCCEEEEEeCCCC-------------CHHHHHHHHHHHHCCCEEEEEeCCCCChhhhcccc
Confidence 33334477788888877765 457888999888885 8999999998888887643
No 324
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=33.28 E-value=65 Score=29.16 Aligned_cols=20 Identities=15% Similarity=0.290 Sum_probs=16.0
Q ss_pred hhcCCCEEEEEecCCcccCC
Q 020285 62 ASKGKQIVMFLDYDGTLSPI 81 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~ 81 (328)
..+..+.++++|.||-+...
T Consensus 154 ~l~Ad~liilTDVdGvy~~d 173 (251)
T cd04242 154 LVNADLLILLSDVDGLYDKN 173 (251)
T ss_pred HcCCCEEEEecCcCEEEeCC
Confidence 34677888999999999764
No 325
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=33.20 E-value=1.2e+02 Score=27.81 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=16.4
Q ss_pred HhhcCCCEEEEEecCCcccCC
Q 020285 61 EASKGKQIVMFLDYDGTLSPI 81 (328)
Q Consensus 61 ~~~~~k~~li~~D~DGTL~~~ 81 (328)
...+..+.++++|.||-+...
T Consensus 179 ~~l~A~~li~ltdv~Gv~~~~ 199 (268)
T PRK14058 179 GALKAEALVLLSDVPGLLRDP 199 (268)
T ss_pred HHcCCCEEEEEeCChhhccCC
Confidence 344777888999999999753
No 326
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=33.15 E-value=27 Score=36.42 Aligned_cols=63 Identities=24% Similarity=0.304 Sum_probs=46.4
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCCC--CccceEEeCCh
Q 020285 226 RMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLREP 303 (328)
Q Consensus 226 ~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~~--~t~A~~~l~~~ 303 (328)
..|-+|-|. .|-.-++.|.++-. .+-..||+.||-+.++.+ ..||+|.++.+ ...++.++..|
T Consensus 563 dgfAgVfpe---hKy~iV~~Lq~r~h-------i~gmtgdgvndapaLKkA-----digiava~atdaar~asdiVltep 627 (942)
T KOG0205|consen 563 DGFAGVFPE---HKYEIVKILQERKH-------IVGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEP 627 (942)
T ss_pred cCccccCHH---HHHHHHHHHhhcCc-------eecccCCCcccchhhccc-----ccceeeccchhhhcccccEEEcCC
Confidence 345556666 57777777666421 466789999999999998 68999998865 46778887665
No 327
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=32.80 E-value=1.5e+02 Score=26.46 Aligned_cols=59 Identities=12% Similarity=0.074 Sum_probs=37.8
Q ss_pred chHHHHHHhhcCCCEEEEEecC------CcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCCh
Q 020285 54 DMFHEITEASKGKQIVMFLDYD------GTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCR 115 (328)
Q Consensus 54 ~~~~~~~~~~~~k~~li~~D~D------GTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~ 115 (328)
+.|.++...+.+.+..+.+|+- +++....- ...-..++.+.++.+.+. ...+++||+..
T Consensus 108 ~~~~~i~~~~~~~~i~~~ld~k~~~~~~~~v~~~~~---~~~~~~~~~~~~~~l~~~G~d~i~v~~i~~ 173 (243)
T cd04731 108 ELIREIAKRFGSQCVVVSIDAKRRGDGGYEVYTHGG---RKPTGLDAVEWAKEVEELGAGEILLTSMDR 173 (243)
T ss_pred HHHHHHHHHcCCCCEEEEEEeeecCCCceEEEEcCC---ceecCCCHHHHHHHHHHCCCCEEEEeccCC
Confidence 5567777777666788888853 55553211 011234566777888777 48899988876
No 328
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=32.58 E-value=1.2e+02 Score=28.17 Aligned_cols=19 Identities=16% Similarity=0.412 Sum_probs=15.7
Q ss_pred hhcCCCEEEEEecCCcccC
Q 020285 62 ASKGKQIVMFLDYDGTLSP 80 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~ 80 (328)
..+..+.++++|.||-+.+
T Consensus 192 ~l~Ad~li~lTdv~Gv~~~ 210 (284)
T CHL00202 192 KLNAEKLILLTDTPGILAD 210 (284)
T ss_pred HhCCCEEEEEeCChhhcCC
Confidence 4466788999999999975
No 329
>PRK14557 pyrH uridylate kinase; Provisional
Probab=31.40 E-value=1.6e+02 Score=26.84 Aligned_cols=60 Identities=12% Similarity=0.164 Sum_probs=35.6
Q ss_pred cCCCEEEE-EecCCcccCCCC-CCCcccCCh---------HH----HHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 64 KGKQIVMF-LDYDGTLSPIVE-NPDRAFMSG---------KM----RRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 64 ~~k~~li~-~D~DGTL~~~~~-~p~~~~is~---------~~----~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
+....+++ +|.||-....+. +|+...++. +. ..+++-..+. .+++|++|+....+..++.
T Consensus 153 ~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~~~~~~~~~~A~~~a~~~gi~v~I~ng~~~~~l~~~l~ 228 (247)
T PRK14557 153 NSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICL 228 (247)
T ss_pred CCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcccCHHHHHHHHHHHHHHCCCcEEEEeCCCChHHHHHHc
Confidence 55666667 499999886332 233222111 11 1222323333 4999999999999988774
No 330
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=31.19 E-value=62 Score=28.94 Aligned_cols=36 Identities=17% Similarity=-0.047 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHH
Q 020285 239 KGKALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKIL 276 (328)
Q Consensus 239 KG~al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~ 276 (328)
+...++.+++.++..+. ..+++|||+ .+|+.+=+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~--~~~~~vGD~~~~Di~~a~~~ 233 (242)
T TIGR01459 197 YPAIFHKALKECSNIPK--NRMLMVGDSFYTDILGANRL 233 (242)
T ss_pred CHHHHHHHHHHcCCCCc--ccEEEECCCcHHHHHHHHHC
Confidence 34567788888886532 169999999 6998766554
No 331
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=31.10 E-value=1.7e+02 Score=25.17 Aligned_cols=56 Identities=23% Similarity=0.209 Sum_probs=33.8
Q ss_pred eEEEEeCCcCCHHHHHHHHhC---CCceEEEEcCCCCCccceEEe--------CChhHHHHHHHHHHHhhhc
Q 020285 259 FPVYIGDDTTDEDAFKILRKR---EQGFGILVSKFPKKTSASYSL--------REPDEVMDFLQKLVRWKRD 319 (328)
Q Consensus 259 ~~i~~GD~~nD~~Mf~~~~~~---~~g~~v~v~n~~~~t~A~~~l--------~~~~~V~~~L~~l~~~~~~ 319 (328)
.++++|+ ||++|..++++. +.|+.++- ++ +..|..-| .+.++|.+.++.|-+..+.
T Consensus 67 niiviG~--~~~dm~~A~n~l~~~gGG~vvv~-~g--~v~a~lpLpi~GlmS~~~~eev~~~~~~l~~~~~~ 133 (171)
T PF13382_consen 67 NIIVIGT--NDEDMALAANRLIEMGGGIVVVD-DG--EVLAELPLPIAGLMSDLPAEEVARQLEELEEALRE 133 (171)
T ss_dssp -EEEEES--SHHHHHHHHHHHHHTTSEEEEEE-TT--EEEEEEE-TBTTTBBSS-HHHHHHHHHHHHHHHHT
T ss_pred CEEEEEC--CHHHHHHHHHHHHHhCCCEEEEE-CC--EEEEEEeccccceecCCCHHHHHHHHHHHHHHHHH
Confidence 7999998 688998887663 33444332 22 12333322 2568899998888876653
No 332
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=30.89 E-value=1.5e+02 Score=27.44 Aligned_cols=62 Identities=19% Similarity=0.294 Sum_probs=40.0
Q ss_pred HHHHhhcCCCEEEEEecCCcccCCCCC---------------CC---cccCChHHHHHHHHHHhcC-CEEEEcCCChhhH
Q 020285 58 EITEASKGKQIVMFLDYDGTLSPIVEN---------------PD---RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKV 118 (328)
Q Consensus 58 ~~~~~~~~k~~li~~D~DGTL~~~~~~---------------p~---~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v 118 (328)
+++.+.+..+.++++|.+|-|-...+. ++ ..-|-++.+.+++.+..-. ++.|++||....+
T Consensus 170 ~iA~aLkAekLi~ltdv~Gvl~~~~~~s~i~~~~~~~~~~li~~~~i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~l 249 (265)
T COG0548 170 ALAAALKAEKLILLTDVPGVLDDKGDPSLISELDAEEAEELIEQGIITGGMIPKVEAALEALESGVRRVHIISGRVPHSL 249 (265)
T ss_pred HHHHHcCCCeEEEEeCCcccccCCCCceeeccCCHHHHHHHHhcCCccCccHHHHHHHHHHHHhCCCeEEEecCCCcchH
Confidence 566666889999999999988875420 00 1224455566666665553 6777777777664
Q ss_pred H
Q 020285 119 Y 119 (328)
Q Consensus 119 ~ 119 (328)
.
T Consensus 250 l 250 (265)
T COG0548 250 L 250 (265)
T ss_pred H
Confidence 3
No 333
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=30.86 E-value=66 Score=27.47 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=28.9
Q ss_pred cCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 89 FMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
.+-+.+.+.|+.++++ .+++|+||.+...+..+.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~ 121 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLA 121 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH
Confidence 4678899999999888 499999999988887765
No 334
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=30.84 E-value=91 Score=27.95 Aligned_cols=47 Identities=19% Similarity=0.247 Sum_probs=31.1
Q ss_pred CEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcC--CChhhHHhhhC
Q 020285 67 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTG--RCRDKVYDFVK 123 (328)
Q Consensus 67 ~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SG--R~~~~v~~~~~ 123 (328)
+.+++.|+|||+.... .+.+.++++++.. .-++++| |+.+.+++++.
T Consensus 44 ~~l~ivDldga~~g~~----------~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 44 DKIHVVDLDGAFEGKP----------KNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CEEEEEECcchhcCCc----------chHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 4567899999997631 2467888888774 3345555 55566766653
No 335
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=30.71 E-value=45 Score=30.21 Aligned_cols=17 Identities=29% Similarity=0.257 Sum_probs=14.7
Q ss_pred EEEEeCCcCCHHHHHHH
Q 020285 260 PVYIGDDTTDEDAFKIL 276 (328)
Q Consensus 260 ~i~~GD~~nD~~Mf~~~ 276 (328)
++++||+.+|+.+-+.+
T Consensus 187 ~i~vGDs~~DI~aAk~A 203 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEA 203 (237)
T ss_pred eEEEeCCHHHHHHHHHC
Confidence 79999999999777665
No 336
>PRK00358 pyrH uridylate kinase; Provisional
Probab=30.67 E-value=1.2e+02 Score=26.82 Aligned_cols=62 Identities=13% Similarity=0.157 Sum_probs=37.6
Q ss_pred hhcCCCEEEEEecCCcccCCCC-CCCccc---CChH-H---------HHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 62 ASKGKQIVMFLDYDGTLSPIVE-NPDRAF---MSGK-M---------RRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~~~-~p~~~~---is~~-~---------~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
..+..+.++++|.||-....+. +|+... ++.+ + ..+++-+.+. .+++|++|+....+.+++.
T Consensus 146 ~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~~i~v~I~~g~~~~~l~~~l~ 222 (231)
T PRK00358 146 EIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEKGLKVMDATAISLARDNKIPIIVFNMNKPGNLKRVVK 222 (231)
T ss_pred HcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHcCCcchhHHHHHHHHHcCCcEEEECCCCchHHHHHHC
Confidence 3477788889999999975322 233222 2211 1 1223333344 4899999998888888763
No 337
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=30.16 E-value=29 Score=31.98 Aligned_cols=17 Identities=29% Similarity=0.296 Sum_probs=14.7
Q ss_pred cCCCEEEEEecCCcccC
Q 020285 64 KGKQIVMFLDYDGTLSP 80 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~ 80 (328)
..+|+.+++|+|.||..
T Consensus 86 ~~~kk~lVLDLDeTLvH 102 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVH 102 (262)
T ss_pred cCCCceEEEeCCCcccc
Confidence 55778899999999887
No 338
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=30.11 E-value=1.3e+02 Score=27.33 Aligned_cols=18 Identities=22% Similarity=0.475 Sum_probs=14.5
Q ss_pred hhcCCCEEEEEecCCccc
Q 020285 62 ASKGKQIVMFLDYDGTLS 79 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~ 79 (328)
+.+..+.++++|.||-+.
T Consensus 176 ~L~A~~li~~tdv~Gv~~ 193 (257)
T cd04251 176 ALKAERLILLTDVEGLYL 193 (257)
T ss_pred HcCCCEEEEEeCChhhee
Confidence 447788889999999775
No 339
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=29.91 E-value=62 Score=35.69 Aligned_cols=34 Identities=15% Similarity=0.036 Sum_probs=30.0
Q ss_pred cCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 89 FMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
.+-+++.++|+++++. .+++++|||+...+..+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia 602 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA 602 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 3678999999999999 599999999999988765
No 340
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=29.69 E-value=1.5e+02 Score=23.48 Aligned_cols=49 Identities=14% Similarity=0.249 Sum_probs=33.1
Q ss_pred HHHHhh-cCCCEEEEEec-CCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 58 EITEAS-KGKQIVMFLDY-DGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 58 ~~~~~~-~~k~~li~~D~-DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
+++... ..+..++++|+ =||..+. + .++... ..+.++||=+...+.+.+
T Consensus 49 ~~i~~~~~~~~viil~Dl~GGSp~n~---------------~-~~~~~~~~~~~visG~nlpmlle~~ 100 (122)
T cd00006 49 AALAELDSGEGVLILTDLFGGSPNNA---------------A-ARLSMEHPPVEVIAGVNLPMLLEAA 100 (122)
T ss_pred HHHHHhCCCCcEEEEEeCCCCCHHHH---------------H-HHHHhcCCCEEEEEccCHHHHHHHH
Confidence 333334 35778999999 7887651 1 223233 678899999999888765
No 341
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=29.62 E-value=3.4e+02 Score=26.70 Aligned_cols=41 Identities=15% Similarity=0.196 Sum_probs=25.9
Q ss_pred CCHHHHHHHHhCCCceEE--EEcCCCCCccceEE----eCChhHHHHHH
Q 020285 268 TDEDAFKILRKREQGFGI--LVSKFPKKTSASYS----LREPDEVMDFL 310 (328)
Q Consensus 268 nD~~Mf~~~~~~~~g~~v--~v~n~~~~t~A~~~----l~~~~~V~~~L 310 (328)
||+.+-+++-+. -.+| +||...+.|.++|+ ...|.++++++
T Consensus 212 n~e~v~~ai~~~--~~Pvis~IGHE~D~tl~D~vAd~ra~TPtaaae~~ 258 (438)
T PRK00286 212 NDEAVARAIAAS--RIPVISAVGHETDFTIADFVADLRAPTPTAAAELA 258 (438)
T ss_pred CcHHHHHHHHcC--CCCEEEeccCCCCccHHHHhhhccCCChHHHHHHh
Confidence 899988888654 3455 45555555655554 45677666644
No 342
>PRK14556 pyrH uridylate kinase; Provisional
Probab=28.09 E-value=1.3e+02 Score=27.62 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=39.0
Q ss_pred cCCCEEEEEecCCcccCCC-CCCCccc---CC------hHH----HHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 64 KGKQIVMFLDYDGTLSPIV-ENPDRAF---MS------GKM----RRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 64 ~~k~~li~~D~DGTL~~~~-~~p~~~~---is------~~~----~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
+....++++|.||-....+ .+|+... ++ ... ..+++.+.+. .+++|+.|+....+.+++.
T Consensus 164 ~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~~l~vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~ 238 (249)
T PRK14556 164 GADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSKELNVMDLGAFTQCRDFGIPIYVFDLTQPNALVDAVL 238 (249)
T ss_pred CCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhcccchHhHHHHHHHHHHHCCCcEEEECCCCchHHHHHHc
Confidence 6677888999999987532 2232111 11 111 2455555565 5999999999999988773
No 343
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=27.90 E-value=97 Score=28.70 Aligned_cols=41 Identities=32% Similarity=0.299 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCC-cCCHHHHHHHHhCCCce-EEEEcCC
Q 020285 242 ALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGF-GILVSKF 290 (328)
Q Consensus 242 al~~Ll~~lg~~~~~~~~~i~~GD~-~nD~~Mf~~~~~~~~g~-~v~v~n~ 290 (328)
..+..++.++...+ .++++||+ .||+.+=..+ |+ ++.|..+
T Consensus 195 i~~~al~~~~~~~~---~~~mVGD~~~TDI~~a~~~-----G~~t~LV~TG 237 (269)
T COG0647 195 IYEAALEKLGLDRS---EVLMVGDRLDTDILGAKAA-----GLDTLLVLTG 237 (269)
T ss_pred HHHHHHHHhCCCcc---cEEEEcCCchhhHHHHHHc-----CCCEEEEccC
Confidence 45788888988876 79999998 6898765554 54 6667554
No 344
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=27.89 E-value=1.7e+02 Score=26.87 Aligned_cols=19 Identities=16% Similarity=0.359 Sum_probs=15.2
Q ss_pred hhcCCCEEEEEecCCcccC
Q 020285 62 ASKGKQIVMFLDYDGTLSP 80 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~ 80 (328)
..+..+.++++|.||-+..
T Consensus 173 ~l~ad~li~~TdVdGVy~~ 191 (262)
T cd04255 173 VIGARNLIFVKDEDGLYTA 191 (262)
T ss_pred HhCCCEEEEEeccCeeECC
Confidence 3466788889999999974
No 345
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=27.13 E-value=38 Score=30.28 Aligned_cols=47 Identities=19% Similarity=0.233 Sum_probs=32.7
Q ss_pred EEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEc---CCChhhHHh
Q 020285 68 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVT---GRCRDKVYD 120 (328)
Q Consensus 68 ~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~S---GR~~~~v~~ 120 (328)
+-+.+|+-|||-. +. ...|...++|++|..+ ..|=++| +-+...+.+
T Consensus 8 ~gvLlDlSGtLh~-----e~-~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~ 58 (262)
T KOG3040|consen 8 KGVLLDLSGTLHI-----ED-AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHE 58 (262)
T ss_pred ceEEEeccceEec-----cc-ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHH
Confidence 4578899999987 22 3567889999999965 4665655 444444444
No 346
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=27.11 E-value=28 Score=29.94 Aligned_cols=11 Identities=36% Similarity=0.682 Sum_probs=10.2
Q ss_pred EEEecCCcccC
Q 020285 70 MFLDYDGTLSP 80 (328)
Q Consensus 70 i~~D~DGTL~~ 80 (328)
+.+|+|||++.
T Consensus 9 ~ciDIDGtit~ 19 (194)
T COG5663 9 CCIDIDGTITD 19 (194)
T ss_pred eeeccCCceec
Confidence 78899999997
No 347
>COG0101 TruA Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]
Probab=27.11 E-value=85 Score=29.03 Aligned_cols=55 Identities=22% Similarity=0.335 Sum_probs=40.3
Q ss_pred CEEEEEecCCcccC-CCCCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhh
Q 020285 67 QIVMFLDYDGTLSP-IVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDF 121 (328)
Q Consensus 67 ~~li~~D~DGTL~~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~ 121 (328)
+..+-+=||||-.. +...|+...+-.+..++|.++.....-++++||.-..|-..
T Consensus 3 ri~l~iaYdGt~f~G~Q~Qp~~~TVQ~~le~aL~~i~~~~~~i~~AGRTD~GVHA~ 58 (266)
T COG0101 3 RIALKIAYDGTRFHGWQRQPNVRTVQGELEKALSKIGGESVRVIGAGRTDAGVHAL 58 (266)
T ss_pred eEEEEEEEcCCceeeeccCCCCCCHHHHHHHHHHHhcCCcceeEEecCCCcCcccc
Confidence 56788899999874 33345556777788888887766545689999988776543
No 348
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=26.65 E-value=2.7e+02 Score=25.51 Aligned_cols=21 Identities=19% Similarity=0.302 Sum_probs=16.5
Q ss_pred hhcCCCEEEEEecCCcccCCC
Q 020285 62 ASKGKQIVMFLDYDGTLSPIV 82 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~~ 82 (328)
..+..+.++.+|.||-+....
T Consensus 159 ~l~pd~v~f~tdVdGVy~~~p 179 (252)
T COG1608 159 ELKPDRVIFLTDVDGVYDRDP 179 (252)
T ss_pred HhCCCEEEEEecCCceecCCC
Confidence 346788889999999988643
No 349
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=26.09 E-value=1.4e+02 Score=26.64 Aligned_cols=62 Identities=13% Similarity=0.065 Sum_probs=37.1
Q ss_pred hhcCCCEEEEEe-cCCcccCCCC-CCCcccCCh------------HH-HHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 62 ASKGKQIVMFLD-YDGTLSPIVE-NPDRAFMSG------------KM-RRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 62 ~~~~k~~li~~D-~DGTL~~~~~-~p~~~~is~------------~~-~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
..+....++++| .||-....+. .|+...++. .+ ..+++-+.+. .+++|++|+....+.+++.
T Consensus 147 ~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~~~~~~d~~~~~~a~~~~i~v~i~~g~~~~~l~~~l~ 224 (233)
T TIGR02075 147 EINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKKNLKVMDLTAFALARDNNLPIVVFNIDEPGALKKVIL 224 (233)
T ss_pred HcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhcCHHHHHHHHHHHHHHCCCeEEEEeCCCcchHHHHHC
Confidence 346777888999 9999876432 222111111 00 1223333333 4899999998888888773
No 350
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=26.03 E-value=1.9e+02 Score=25.98 Aligned_cols=18 Identities=22% Similarity=0.473 Sum_probs=14.9
Q ss_pred hcCCCEEEEEecCCcccC
Q 020285 63 SKGKQIVMFLDYDGTLSP 80 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~ 80 (328)
.+..+.++++|.||-+..
T Consensus 160 l~A~~li~ltdv~Gv~~~ 177 (252)
T cd04241 160 LKPERVIFLTDVDGVYDK 177 (252)
T ss_pred cCCCEEEEEeCCCeeECC
Confidence 366788899999999876
No 351
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=25.99 E-value=1.8e+02 Score=21.31 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=17.7
Q ss_pred HhhhhCCCCcchHHHHHHhhc-CCCEEEEEecCCc
Q 020285 44 AWIIRHPSALDMFHEITEASK-GKQIVMFLDYDGT 77 (328)
Q Consensus 44 ~w~~~~~~al~~~~~~~~~~~-~k~~li~~D~DGT 77 (328)
.|-......+..+.++..... ..-.++.++.|+.
T Consensus 29 ~~C~~C~~~~~~l~~~~~~~~~~~~~~~~v~~d~~ 63 (116)
T cd02966 29 SWCPPCRAEMPELEALAKEYKDDGVEVVGVNVDDD 63 (116)
T ss_pred ccChhHHHHhHHHHHHHHHhCCCCeEEEEEECCCC
Confidence 344334455555655555443 3345666666654
No 352
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=25.65 E-value=25 Score=28.86 Aligned_cols=70 Identities=20% Similarity=0.331 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHH-HHHHHhCCCceEEEEcCC------C------CC--ccceEEeCC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDA-FKILRKREQGFGILVSKF------P------KK--TSASYSLRE 302 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~M-f~~~~~~~~g~~v~v~n~------~------~~--t~A~~~l~~ 302 (328)
.||.-+..|..+..+... |.-++-|||.+--... |.+ ||.++.+.+ + ++ ..|.-++.+
T Consensus 56 ~k~a~iN~iRT~~li~~a-DvVVvrFGekYKQWNaAfDA------g~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et 128 (141)
T PF11071_consen 56 HKGAKINAIRTRTLIEKA-DVVVVRFGEKYKQWNAAFDA------GYAAALGKPLITLHPEELHHPLKEVDAAALAVAET 128 (141)
T ss_pred chhhhhhHHHHHHHHhhC-CEEEEEechHHHHHHHHhhH------HHHHHcCCCeEEecchhccccHHHHhHhhHhhhCC
Confidence 455556666656555543 3467889997632221 222 444444443 1 11 457778889
Q ss_pred hhHHHHHHHHHH
Q 020285 303 PDEVMDFLQKLV 314 (328)
Q Consensus 303 ~~~V~~~L~~l~ 314 (328)
|+.|.+.|+-++
T Consensus 129 ~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 129 PEQVVEILRYVL 140 (141)
T ss_pred HHHHHHHHHHHh
Confidence 999999887654
No 353
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=24.97 E-value=1.3e+02 Score=23.37 Aligned_cols=48 Identities=13% Similarity=0.308 Sum_probs=36.9
Q ss_pred hhcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhh
Q 020285 62 ASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~ 122 (328)
.......+|++.+.|. +.++.+.++.+++. .+++.+|+.+-..+.+..
T Consensus 50 ~~~~~d~vi~is~sg~-------------~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~a 98 (131)
T PF01380_consen 50 NLDPDDLVIIISYSGE-------------TRELIELLRFAKERGAPVILITSNSESPLARLA 98 (131)
T ss_dssp GCSTTEEEEEEESSST-------------THHHHHHHHHHHHTTSEEEEEESSTTSHHHHHS
T ss_pred cccccceeEeeecccc-------------chhhhhhhHHHHhcCCeEEEEeCCCCCchhhhC
Confidence 3455677788777663 35789999988887 489999999888888766
No 354
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=24.96 E-value=88 Score=28.07 Aligned_cols=45 Identities=33% Similarity=0.225 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCc-eEEEEcCC
Q 020285 238 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQG-FGILVSKF 290 (328)
Q Consensus 238 ~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g-~~v~v~n~ 290 (328)
||-.= +.-++.+|.+++ +++.||||.||-- .-+. ..| .||.|..+
T Consensus 183 ~~~fF-e~al~~~gv~p~---~aVMIGDD~~dDv-gGAq---~~GMrgilVkTG 228 (262)
T KOG3040|consen 183 SPFFF-ESALQALGVDPE---EAVMIGDDLNDDV-GGAQ---ACGMRGILVKTG 228 (262)
T ss_pred CHHHH-HHHHHhcCCChH---HheEEccccccch-hhHh---hhcceeEEeecc
Confidence 45443 445566788877 8999999998732 1111 124 37777654
No 355
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=24.79 E-value=2.6e+02 Score=24.64 Aligned_cols=60 Identities=18% Similarity=0.254 Sum_probs=33.9
Q ss_pred hcCCCEEEEEecCCcccCCCC-CCCccc---CChH-H------------------HHHHHHHHhc-CCEEEEcCCChhhH
Q 020285 63 SKGKQIVMFLDYDGTLSPIVE-NPDRAF---MSGK-M------------------RRAVRQLAKY-FPTAIVTGRCRDKV 118 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~~~-~p~~~~---is~~-~------------------~~aL~~L~~~-~~v~I~SGR~~~~v 118 (328)
.+....++++|.||-+...+. +|+... ++.+ + ..+++-+.+. .+++|+.|+....+
T Consensus 128 l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~g~~~~~d~~a~~~~~~~gi~~~I~~g~~p~~l 207 (221)
T cd04253 128 LGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKSSWKAGSNEPFDPLAAKIIERSGIKTIVVDGRDPENL 207 (221)
T ss_pred cCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCCCcCCCCCcchHHHHHHHHHHCCCeEEEECCCCccHH
Confidence 366778889999999976432 222221 2111 1 1122222333 37788888877777
Q ss_pred Hhhh
Q 020285 119 YDFV 122 (328)
Q Consensus 119 ~~~~ 122 (328)
.+++
T Consensus 208 ~~~l 211 (221)
T cd04253 208 ERAL 211 (221)
T ss_pred HHHH
Confidence 7766
No 356
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=24.22 E-value=2.4e+02 Score=23.84 Aligned_cols=48 Identities=19% Similarity=0.189 Sum_probs=35.0
Q ss_pred HHHHhhcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCCh
Q 020285 58 EITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCR 115 (328)
Q Consensus 58 ~~~~~~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~ 115 (328)
.|+++......++.+|+.|.-.. |+++-+.|.++...+ .++++=|-+.
T Consensus 59 ~il~~i~~~~~vi~Ld~~Gk~~s----------Se~fA~~l~~~~~~G~~i~f~IGG~~ 107 (155)
T COG1576 59 AILAAIPKGSYVVLLDIRGKALS----------SEEFADFLERLRDDGRDISFLIGGAD 107 (155)
T ss_pred HHHHhcCCCCeEEEEecCCCcCC----------hHHHHHHHHHHHhcCCeEEEEEeCcc
Confidence 45555555668999999998776 578888899888875 5666655544
No 357
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=23.88 E-value=2.5e+02 Score=27.05 Aligned_cols=59 Identities=24% Similarity=0.371 Sum_probs=34.5
Q ss_pred hcCCCEEEEEecCCcccCCC-CCCCcc---cC-----------------------ChHHHHHHHHHHhc-CCEEEEcCCC
Q 020285 63 SKGKQIVMFLDYDGTLSPIV-ENPDRA---FM-----------------------SGKMRRAVRQLAKY-FPTAIVTGRC 114 (328)
Q Consensus 63 ~~~k~~li~~D~DGTL~~~~-~~p~~~---~i-----------------------s~~~~~aL~~L~~~-~~v~I~SGR~ 114 (328)
.+....++++|.||-+...+ .+|+.. .+ .++.. +.+...+. .+++|++|+.
T Consensus 156 l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~~~gtGGM~~Kl~-Aa~~a~~~gi~v~I~~g~~ 234 (363)
T TIGR01027 156 VGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGSSVGTGGMRTKLQ-AADLATRAGVPVIIASGSK 234 (363)
T ss_pred cCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCcCcCcCCchHHHH-HHHHHHHCCCeEEEEeCCC
Confidence 36677888999999998543 223211 11 11111 22333333 4788888887
Q ss_pred hhhHHhhh
Q 020285 115 RDKVYDFV 122 (328)
Q Consensus 115 ~~~v~~~~ 122 (328)
...+.+++
T Consensus 235 ~~~l~~~l 242 (363)
T TIGR01027 235 PEKIADAL 242 (363)
T ss_pred ccHHHHHh
Confidence 77777766
No 358
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=23.85 E-value=1.4e+02 Score=27.97 Aligned_cols=68 Identities=18% Similarity=0.358 Sum_probs=51.7
Q ss_pred hCCCeEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCcCCHHHHHHHHhCCCceEEEEcCCC
Q 020285 216 EYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP 291 (328)
Q Consensus 216 ~~~~l~~~~g~~~lEI~p~~~~~KG~al~~Ll~~lg~~~~~~~~~i~~GD~~nD~~Mf~~~~~~~~g~~v~v~n~~ 291 (328)
.||++..+.+. -+.... +..+..=+..|++.+++.. .++++|=|+.=|.+++.+..+. ..|++|-|++
T Consensus 69 N~PGf~~t~~~--~~~~~~-n~er~~~~~~ll~~l~i~~----~~i~~gHSrGcenal~la~~~~-~~g~~lin~~ 136 (297)
T PF06342_consen 69 NYPGFGFTPGY--PDQQYT-NEERQNFVNALLDELGIKG----KLIFLGHSRGCENALQLAVTHP-LHGLVLINPP 136 (297)
T ss_pred CCCCCCCCCCC--cccccC-hHHHHHHHHHHHHHcCCCC----ceEEEEeccchHHHHHHHhcCc-cceEEEecCC
Confidence 45665555443 344455 6688899999999999995 5999999999999999886653 5677777764
No 359
>PRK14586 tRNA pseudouridine synthase ACD; Provisional
Probab=23.79 E-value=85 Score=28.49 Aligned_cols=55 Identities=20% Similarity=0.232 Sum_probs=39.5
Q ss_pred CEEEEEecCCcccC-CCCCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhh
Q 020285 67 QIVMFLDYDGTLSP-IVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDF 121 (328)
Q Consensus 67 ~~li~~D~DGTL~~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~ 121 (328)
+..+.+=||||=.. +...|+...+..+..++|.++.....-++.+||.-..|-..
T Consensus 3 ~~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~ 58 (245)
T PRK14586 3 RVAAVVSYDGSNFFGYQGQPDVRTVQGVFEDALERIFKQRIYTQAAGRTDTGVHAN 58 (245)
T ss_pred EEEEEEEEcCCceeeEEECCCCCCHHHHHHHHHHHHhCCCeeEEEecCCccCCCcc
Confidence 56688899999664 23345556788888888888865444577899988777654
No 360
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=23.72 E-value=2e+02 Score=30.55 Aligned_cols=55 Identities=18% Similarity=0.265 Sum_probs=42.2
Q ss_pred CCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhhh
Q 020285 66 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 66 k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~~ 122 (328)
.+-++++-.||.+...-.- ...+-++.+++|++|++.+ ++++.||=....++.+-
T Consensus 516 G~t~v~va~dg~~~g~i~~--~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA 571 (713)
T COG2217 516 GKTVVFVAVDGKLVGVIAL--ADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571 (713)
T ss_pred CCeEEEEEECCEEEEEEEE--eCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 4447889999977753211 1247789999999999995 89999999998877754
No 361
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=23.59 E-value=1.7e+02 Score=26.09 Aligned_cols=62 Identities=15% Similarity=0.169 Sum_probs=37.5
Q ss_pred hhcCCCEEEEEecCCcccCCCC-CCCcc---cCCh-HH---------HHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 62 ASKGKQIVMFLDYDGTLSPIVE-NPDRA---FMSG-KM---------RRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~~~-~p~~~---~is~-~~---------~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
..+.++.++++|.||-+..... .|+.. .++. ++ ..+++-+.+. .++.|++|+....+.+++.
T Consensus 146 ~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~~~~~~d~~a~~~a~~~gi~~~I~~g~~~~~l~~~l~ 222 (231)
T cd04254 146 EINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSKGLKVMDATAFTLCRDNNLPIVVFNINEPGNLLKAVK 222 (231)
T ss_pred HcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhcchhhhHHHHHHHHHHCCCeEEEEeCCCccHHHHHHC
Confidence 3466778889999999975332 22211 1221 00 1123333334 4899999999999988773
No 362
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=23.34 E-value=2.7e+02 Score=24.43 Aligned_cols=61 Identities=18% Similarity=0.255 Sum_probs=34.2
Q ss_pred hhcCCCEEEEEecCCcccCCCC-CCCcc---cCChH-------------------HHHHHHHHHhc-CCEEEEcCCChhh
Q 020285 62 ASKGKQIVMFLDYDGTLSPIVE-NPDRA---FMSGK-------------------MRRAVRQLAKY-FPTAIVTGRCRDK 117 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~~~-~p~~~---~is~~-------------------~~~aL~~L~~~-~~v~I~SGR~~~~ 117 (328)
..+....++++|.||-+...+. +|+.. .++.+ -..+++.+.+. .+++|++|+....
T Consensus 127 ~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~g~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~ 206 (221)
T TIGR02076 127 FSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSSSVKAGSNEVVDPLAAKIIERSKIRTIVVNGRDPEN 206 (221)
T ss_pred HcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCCCccCCCCceeHHHHHHHHHHCCCcEEEECCCCccH
Confidence 3466778889999999975321 22211 12111 11233333333 4788888887766
Q ss_pred HHhhh
Q 020285 118 VYDFV 122 (328)
Q Consensus 118 v~~~~ 122 (328)
+..++
T Consensus 207 l~~~l 211 (221)
T TIGR02076 207 LEKVL 211 (221)
T ss_pred HHHHH
Confidence 66654
No 363
>KOG4779 consensus Predicted membrane protein [Function unknown]
Probab=23.32 E-value=51 Score=23.96 Aligned_cols=24 Identities=21% Similarity=0.329 Sum_probs=18.9
Q ss_pred HHHHHHcCCCCCCCceEEEEeCCcCCH
Q 020285 244 EFLLECLGFADCSNVFPVYIGDDTTDE 270 (328)
Q Consensus 244 ~~Ll~~lg~~~~~~~~~i~~GD~~nD~ 270 (328)
+++++++|.+.+ +.+.|||+.+-+
T Consensus 25 eRFL~riGws~d---~~~gFG~~q~ti 48 (82)
T KOG4779|consen 25 ERFLKRIGWSTD---QGIGFGEDQPTI 48 (82)
T ss_pred HHHHHHhCcCcc---cCcccCCCCccH
Confidence 566778899876 788899987654
No 364
>PRK14024 phosphoribosyl isomerase A; Provisional
Probab=23.32 E-value=2.6e+02 Score=25.10 Aligned_cols=75 Identities=16% Similarity=0.157 Sum_probs=42.9
Q ss_pred HHHHHHhhcCCCEEEEEecC-CcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhh---------HHhhhCc
Q 020285 56 FHEITEASKGKQIVMFLDYD-GTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK---------VYDFVKL 124 (328)
Q Consensus 56 ~~~~~~~~~~k~~li~~D~D-GTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~---------v~~~~~~ 124 (328)
+.++...+ +++..+-+|+. |++....- + .-.....+.++++.+.+ .-+++|+|++.. +.++...
T Consensus 114 ~~~i~~~~-~~~i~vsld~~~~~v~~~Gw--~--~~~~~~~~~~~~l~~~G~~~iiv~~~~~~g~~~G~d~~~i~~i~~~ 188 (241)
T PRK14024 114 CARVIAEH-GDRVAVGLDVRGHTLAARGW--T--RDGGDLWEVLERLDSAGCSRYVVTDVTKDGTLTGPNLELLREVCAR 188 (241)
T ss_pred HHHHHHHh-hhhEEEEEEEeccEeccCCe--e--ecCccHHHHHHHHHhcCCCEEEEEeecCCCCccCCCHHHHHHHHhh
Confidence 45555555 34566677874 55544211 1 12235677788887774 788889998743 3333333
Q ss_pred ccceEecCCCc
Q 020285 125 AELYYAGSHGM 135 (328)
Q Consensus 125 ~~~~~i~~nG~ 135 (328)
..++++++.|.
T Consensus 189 ~~ipviasGGi 199 (241)
T PRK14024 189 TDAPVVASGGV 199 (241)
T ss_pred CCCCEEEeCCC
Confidence 34556665554
No 365
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=23.02 E-value=2.7e+02 Score=25.10 Aligned_cols=18 Identities=22% Similarity=0.425 Sum_probs=13.2
Q ss_pred hhcCCCEEEEEecCCcccC
Q 020285 62 ASKGKQIVMFLDYDGTLSP 80 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~ 80 (328)
+.+.+ .++++|.||-+..
T Consensus 167 ~l~A~-~i~ltdv~Gv~~~ 184 (252)
T cd04249 167 LLNAD-LVLLSDVSGVLDA 184 (252)
T ss_pred HcCCC-EEEEeCCcccCCC
Confidence 33555 6889999998864
No 366
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=22.55 E-value=1e+02 Score=29.55 Aligned_cols=44 Identities=23% Similarity=0.388 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhcCCEEEEcCCChhhHHhhhCcc--cceEecCCCce
Q 020285 93 KMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLA--ELYYAGSHGMD 136 (328)
Q Consensus 93 ~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~~~~--~~~~i~~nG~~ 136 (328)
-.+..+++|.+.+.=+++|.|.+..+.+++... +...+|.||..
T Consensus 15 fFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g~~ 60 (335)
T PF04007_consen 15 FFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHGDS 60 (335)
T ss_pred HHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCCCC
Confidence 357788999999888899999998888776432 34578888843
No 367
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=22.45 E-value=2.4e+02 Score=24.13 Aligned_cols=28 Identities=29% Similarity=0.163 Sum_probs=20.2
Q ss_pred eEEEEeCC-cCCHHHHHHHHhCCCceEEEEcCC
Q 020285 259 FPVYIGDD-TTDEDAFKILRKREQGFGILVSKF 290 (328)
Q Consensus 259 ~~i~~GD~-~nD~~Mf~~~~~~~~g~~v~v~n~ 290 (328)
+++++||- .||+=|=..+ ..|+|.+..+
T Consensus 138 eiavIGDrl~TDVl~gN~~----G~~tilv~~g 166 (168)
T PF09419_consen 138 EIAVIGDRLFTDVLMGNRM----GSYTILVTDG 166 (168)
T ss_pred hEEEEcchHHHHHHHhhcc----CceEEEEecC
Confidence 89999997 6887654443 1489988654
No 368
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=22.18 E-value=1.8e+02 Score=27.02 Aligned_cols=36 Identities=8% Similarity=0.209 Sum_probs=30.6
Q ss_pred ccCChHHHHHHHHHHhc-CCEEEEcCCChhhHHhhhC
Q 020285 88 AFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFVK 123 (328)
Q Consensus 88 ~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~v~~~~~ 123 (328)
..+.|...+.|..|.+. .+++|+||-....+...+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~ 156 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLR 156 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHH
Confidence 45677899999999888 5999999999988888764
No 369
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=22.05 E-value=1.9e+02 Score=26.78 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=34.0
Q ss_pred hhcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 020285 62 ASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 122 (328)
..+..+.++++|.||-+... ...++.-+.+.++++.+...+ +||....+++..+
T Consensus 192 ~L~a~klv~ltdv~GV~~~~-----~~~i~~i~~~e~~~l~~~~~~--~~ggM~~Kv~~a~ 245 (280)
T cd04237 192 ALKADKLIFLTDGPGLLDDD-----GELIRELTAQEAEALLETGAL--LTNDTARLLQAAI 245 (280)
T ss_pred HcCCCEEEEEeCCCcccCCC-----CCccccCCHHHHHHHHHcCCC--CCCCHHHHHHHHH
Confidence 34667888899999998631 122333223555555555443 4888888888765
No 370
>PRK12686 carbamate kinase; Reviewed
Probab=22.02 E-value=1.4e+02 Score=28.22 Aligned_cols=58 Identities=9% Similarity=0.107 Sum_probs=38.1
Q ss_pred hhcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcCCEEEEcCCChhhHHhhh
Q 020285 62 ASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~v~~~~ 122 (328)
..+..+.++++|.||-+.+.. +|+...++.=..+.++++.+... +.||....+++..+
T Consensus 222 ~L~Ad~LIiLTDVdGVy~~~~-~p~ak~I~~I~~~e~~~li~~g~--~~tGGM~pKveAA~ 279 (312)
T PRK12686 222 QIDADLLIILTGVENVFINFN-KPNQQKLDDITVAEAKQYIAEGQ--FAPGSMLPKVEAAI 279 (312)
T ss_pred HcCCCEEEEEeCchhhccCCC-CCCCeECCccCHHHHHHHhhCCC--ccCCCcHHHHHHHH
Confidence 336678888999999998643 34434444433444666655543 46899998887654
No 371
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=21.93 E-value=60 Score=32.35 Aligned_cols=24 Identities=21% Similarity=0.191 Sum_probs=17.3
Q ss_pred HHHHHhhcCCCEEEEEecCCcccC
Q 020285 57 HEITEASKGKQIVMFLDYDGTLSP 80 (328)
Q Consensus 57 ~~~~~~~~~k~~li~~D~DGTL~~ 80 (328)
+.....+......|++|+|+|..+
T Consensus 129 ~~~~~~~~~~~~~i~LDiD~T~~~ 152 (448)
T PF13701_consen 129 DLFLASYKKPPKEIVLDIDSTVDD 152 (448)
T ss_pred HHHHHHhccccceEEEeccccccc
Confidence 444455555567799999999876
No 372
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=21.81 E-value=2.4e+02 Score=27.28 Aligned_cols=20 Identities=15% Similarity=0.325 Sum_probs=15.8
Q ss_pred hhcCCCEEEEEecCCcccCC
Q 020285 62 ASKGKQIVMFLDYDGTLSPI 81 (328)
Q Consensus 62 ~~~~k~~li~~D~DGTL~~~ 81 (328)
..+....++++|.||-+...
T Consensus 163 ~l~Ad~LiilTDVdGVy~~d 182 (372)
T PRK05429 163 LVEADLLILLTDVDGLYTAD 182 (372)
T ss_pred HcCCCEEEEecCCCeeEcCC
Confidence 33667888899999999754
No 373
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=21.37 E-value=1.2e+02 Score=28.27 Aligned_cols=27 Identities=26% Similarity=0.224 Sum_probs=20.6
Q ss_pred HHHHHHHhcC--CEEEEcCCChhhHHhhh
Q 020285 96 RAVRQLAKYF--PTAIVTGRCRDKVYDFV 122 (328)
Q Consensus 96 ~aL~~L~~~~--~v~I~SGR~~~~v~~~~ 122 (328)
-+++++.+.+ .++|+|||+...+...+
T Consensus 40 YiVeEa~~aGIe~i~iVTgr~K~~IeDhF 68 (291)
T COG1210 40 YIVEEAVAAGIEEILIVTGRGKRAIEDHF 68 (291)
T ss_pred HHHHHHHHcCCCEEEEEecCCcchHHHhC
Confidence 3445566664 79999999999988765
No 374
>PRK13936 phosphoheptose isomerase; Provisional
Probab=21.14 E-value=4.3e+02 Score=22.84 Aligned_cols=49 Identities=14% Similarity=0.222 Sum_probs=37.0
Q ss_pred HHhhcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhh
Q 020285 60 TEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 121 (328)
Q Consensus 60 ~~~~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~ 121 (328)
......+..+|++-+.|. ++++.++++.+++.+ +++.+||.+-..+.++
T Consensus 106 a~~~~~~Dv~i~iS~sG~-------------t~~~~~~~~~ak~~g~~iI~IT~~~~s~l~~l 155 (197)
T PRK13936 106 RALGQPGDVLLAISTSGN-------------SANVIQAIQAAHEREMHVVALTGRDGGKMASL 155 (197)
T ss_pred HHhCCCCCEEEEEeCCCC-------------cHHHHHHHHHHHHCCCeEEEEECCCCChhhhh
Confidence 333467788888877774 457888999998885 8899999877766664
No 375
>PF14581 SseB_C: SseB protein C-terminal domain
Probab=20.92 E-value=2.1e+02 Score=22.04 Aligned_cols=76 Identities=17% Similarity=0.277 Sum_probs=42.3
Q ss_pred cchHHHHHhhhhCCCCcchHHHHHHh-hcCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-CCEEEEcCCC
Q 020285 37 SLLEEKRAWIIRHPSALDMFHEITEA-SKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRC 114 (328)
Q Consensus 37 ~~~~~~~~w~~~~~~al~~~~~~~~~-~~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~ 114 (328)
++.+..+.+..+|+....-|=..+.. -.....+|++|+|| . +...+-.++-.+.+..... -+|-+++-+.
T Consensus 19 ~l~~aL~~~~~~~~~V~~Ayl~~~~~~~~~~~~li~vd~~~---~-----~~~~~~~~i~~~~~~~~~~~~~vd~~~~~~ 90 (108)
T PF14581_consen 19 DLLAALSEYFKQHKNVRAAYLALMQDEDEQPSLLIGVDFDG---E-----DIEEIFQEIGRAARPYLPDGWPVDFVLLDD 90 (108)
T ss_pred HHHHHHHHHHhhCccHHHhHHHHhhccCCCceEEEEEeccC---h-----hHHHHHHHHHHHhhhcCCCCceEEEEEccC
Confidence 34466777777777766666555555 35567889999999 2 2222223333333333223 2577776665
Q ss_pred hhhHHh
Q 020285 115 RDKVYD 120 (328)
Q Consensus 115 ~~~v~~ 120 (328)
.+.+-+
T Consensus 91 ~~~~~~ 96 (108)
T PF14581_consen 91 EDPLAK 96 (108)
T ss_pred CCcHHH
Confidence 333443
No 376
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=20.31 E-value=1.4e+02 Score=28.22 Aligned_cols=33 Identities=15% Similarity=0.002 Sum_probs=24.6
Q ss_pred cCChHHHHHHHHHHhcC-CEEEEcCCChhhHHhh
Q 020285 89 FMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 121 (328)
Q Consensus 89 ~is~~~~~aL~~L~~~~-~v~I~SGR~~~~v~~~ 121 (328)
.+.|.+++.|+.|++.+ +++|+||.....+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l 214 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYL 214 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHH
Confidence 35667778888888884 8999999886554443
No 377
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=20.22 E-value=1.1e+02 Score=27.42 Aligned_cols=61 Identities=21% Similarity=0.325 Sum_probs=45.9
Q ss_pred CCCCcchH--HHHHHhh--cCCCEEEEEecCCcccCCCCCCCcccCChHHHHHHHHHHhc-C--CEEEEcCC
Q 020285 49 HPSALDMF--HEITEAS--KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-F--PTAIVTGR 113 (328)
Q Consensus 49 ~~~al~~~--~~~~~~~--~~k~~li~~D~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~--~v~I~SGR 113 (328)
|=.+|+.. ++|..++ .+...++=.--|||.+.. ++.++.+.+.+.+.+|.++ + .+.+|||.
T Consensus 31 e~G~LDgls~~eI~~~aP~~ge~vLvTrL~DG~~V~l----s~~~v~~~lq~~i~~le~~G~d~illlCTG~ 98 (221)
T PF07302_consen 31 EAGALDGLSREEIAALAPEPGEYVLVTRLRDGTQVVL----SKKKVEPRLQACIAQLEAQGYDVILLLCTGE 98 (221)
T ss_pred EeccCCCCCHHHHHHhCCCCCCceeEEEeCCCCEEEE----EHHHHHHHHHHHHHHHHHCCCCEEEEeccCC
Confidence 33566655 4665554 667788888889999885 4567889999999999888 3 47888998
Done!