Query 020286
Match_columns 328
No_of_seqs 245 out of 2060
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 08:31:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020286.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020286hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2557 Uncharacterized conser 100.0 1.5E-37 3.2E-42 272.9 13.3 313 1-324 1-319 (427)
2 smart00584 TLDc domain in TBC 99.9 2E-27 4.3E-32 197.3 12.5 111 216-326 1-113 (165)
3 KOG2372 Oxidation resistance p 99.9 3.9E-27 8.4E-32 195.7 10.3 117 212-328 72-192 (241)
4 KOG0034 Ca2+/calmodulin-depend 99.9 9.3E-23 2E-27 170.2 16.1 175 1-189 1-185 (187)
5 KOG0044 Ca2+ sensor (EF-Hand s 99.9 8.4E-23 1.8E-27 170.5 14.9 178 1-191 1-187 (193)
6 COG5126 FRQ1 Ca2+-binding prot 99.8 8.3E-20 1.8E-24 147.4 15.9 143 16-181 10-158 (160)
7 COG5142 OXR1 Oxidation resista 99.8 2.2E-20 4.8E-25 148.4 5.8 115 214-328 32-162 (212)
8 KOG0038 Ca2+-binding kinase in 99.8 1E-18 2.2E-23 135.5 12.4 172 1-186 1-184 (189)
9 PF07534 TLD: TLD; InterPro: 99.8 1.4E-19 3.1E-24 146.1 8.0 83 241-324 1-84 (139)
10 KOG4636 Uncharacterized conser 99.8 4.7E-17 1E-21 144.1 17.8 210 111-326 142-383 (483)
11 PTZ00183 centrin; Provisional 99.6 2.4E-14 5.3E-19 117.8 17.1 142 19-182 10-157 (158)
12 KOG0027 Calmodulin and related 99.6 3.3E-14 7.1E-19 116.5 14.6 138 20-179 2-149 (151)
13 PTZ00184 calmodulin; Provision 99.6 1.3E-13 2.8E-18 112.2 15.5 138 19-178 4-147 (149)
14 KOG0031 Myosin regulatory ligh 99.5 1.8E-12 3.9E-17 102.0 13.4 138 19-178 25-164 (171)
15 KOG0028 Ca2+-binding protein ( 99.4 7.9E-12 1.7E-16 99.1 14.2 143 17-181 24-172 (172)
16 KOG2801 Probable Rab-GAPs [Int 99.3 3.7E-13 8E-18 116.9 -2.1 98 215-313 341-445 (559)
17 KOG0036 Predicted mitochondria 99.2 2.8E-10 6E-15 103.2 14.0 137 19-182 7-149 (463)
18 KOG0030 Myosin essential light 99.1 1.7E-09 3.6E-14 84.0 12.0 138 19-178 4-150 (152)
19 KOG0037 Ca2+-binding protein, 99.1 4.8E-09 1E-13 87.9 14.2 139 24-190 55-199 (221)
20 PLN02964 phosphatidylserine de 99.0 1.3E-09 2.8E-14 106.9 11.5 103 18-125 135-243 (644)
21 KOG2562 Protein phosphatase 2 98.9 8.7E-09 1.9E-13 95.0 11.7 158 15-186 267-430 (493)
22 COG5126 FRQ1 Ca2+-binding prot 98.7 1.5E-07 3.3E-12 76.4 9.9 83 42-125 68-156 (160)
23 PF13499 EF-hand_7: EF-hand do 98.7 2.4E-08 5.2E-13 69.5 4.2 66 98-177 1-66 (66)
24 PTZ00183 centrin; Provisional 98.6 5.2E-07 1.1E-11 73.9 9.7 95 27-125 54-154 (158)
25 PF13499 EF-hand_7: EF-hand do 98.5 2.4E-07 5.2E-12 64.4 5.8 61 62-123 2-66 (66)
26 KOG0044 Ca2+ sensor (EF-Hand s 98.5 6.3E-07 1.4E-11 75.3 8.8 96 26-125 64-175 (193)
27 KOG4666 Predicted phosphate ac 98.5 2.7E-07 5.9E-12 81.5 6.8 152 20-193 220-373 (412)
28 KOG4223 Reticulocalbin, calume 98.5 1.2E-06 2.5E-11 77.9 10.8 131 22-174 159-300 (325)
29 PTZ00184 calmodulin; Provision 98.5 1.3E-06 2.8E-11 70.6 10.5 94 27-124 48-147 (149)
30 KOG0027 Calmodulin and related 98.5 1.8E-06 4E-11 70.5 11.1 105 61-179 9-113 (151)
31 smart00027 EH Eps15 homology d 98.3 3.2E-06 6.9E-11 63.5 7.7 65 20-88 4-71 (96)
32 KOG0037 Ca2+-binding protein, 98.3 1.5E-05 3.1E-10 67.2 11.8 130 19-178 90-219 (221)
33 cd05022 S-100A13 S-100A13: S-1 98.3 3.5E-06 7.6E-11 62.1 7.2 65 98-179 9-75 (89)
34 cd05027 S-100B S-100B: S-100B 98.2 1.1E-05 2.4E-10 59.4 8.6 69 98-179 9-79 (88)
35 cd05026 S-100Z S-100Z: S-100Z 98.2 1.3E-05 2.8E-10 59.8 8.6 69 98-179 11-81 (93)
36 cd05022 S-100A13 S-100A13: S-1 98.2 7.4E-06 1.6E-10 60.4 6.9 64 23-90 5-76 (89)
37 KOG0034 Ca2+/calmodulin-depend 98.2 1.1E-05 2.4E-10 67.8 8.6 103 19-125 50-175 (187)
38 cd00051 EFh EF-hand, calcium b 98.1 1.4E-05 3.1E-10 53.7 6.9 61 62-123 2-62 (63)
39 cd05026 S-100Z S-100Z: S-100Z 98.1 1.3E-05 2.9E-10 59.7 7.0 64 23-90 7-82 (93)
40 cd05025 S-100A1 S-100A1: S-100 98.1 3.5E-05 7.5E-10 57.4 8.8 71 96-179 8-80 (92)
41 cd00213 S-100 S-100: S-100 dom 98.1 1.9E-05 4.2E-10 58.1 7.3 65 22-90 4-80 (88)
42 cd05029 S-100A6 S-100A6: S-100 98.0 3.4E-05 7.3E-10 56.9 8.0 67 98-179 11-79 (88)
43 cd05031 S-100A10_like S-100A10 98.0 4.3E-05 9.4E-10 57.1 8.5 72 96-180 7-80 (94)
44 KOG0377 Protein serine/threoni 98.0 6.8E-05 1.5E-09 69.2 11.1 132 27-179 465-615 (631)
45 cd05025 S-100A1 S-100A1: S-100 98.0 2.4E-05 5.1E-10 58.2 6.8 60 25-88 8-79 (92)
46 PF13833 EF-hand_8: EF-hand do 98.0 2.5E-05 5.5E-10 51.8 6.1 51 75-125 2-53 (54)
47 cd05023 S-100A11 S-100A11: S-1 98.0 3E-05 6.4E-10 57.3 6.6 66 22-90 5-81 (89)
48 cd00213 S-100 S-100: S-100 dom 97.9 7.5E-05 1.6E-09 55.0 8.7 70 97-179 8-79 (88)
49 cd00052 EH Eps15 homology doma 97.9 3.3E-05 7.2E-10 53.4 6.4 60 64-126 3-62 (67)
50 cd05027 S-100B S-100B: S-100B 97.9 6.6E-05 1.4E-09 55.3 8.1 60 25-88 7-78 (88)
51 cd00052 EH Eps15 homology doma 97.9 6.5E-05 1.4E-09 51.9 7.5 58 29-90 2-62 (67)
52 KOG2643 Ca2+ binding protein, 97.9 1.8E-05 3.9E-10 72.9 5.7 147 27-179 141-314 (489)
53 cd05029 S-100A6 S-100A6: S-100 97.9 7E-05 1.5E-09 55.2 7.6 67 22-90 6-80 (88)
54 PLN02964 phosphatidylserine de 97.9 9.5E-05 2.1E-09 73.2 10.7 112 45-179 120-243 (644)
55 smart00027 EH Eps15 homology d 97.9 0.00011 2.4E-09 55.1 8.5 67 61-130 11-77 (96)
56 cd00252 SPARC_EC SPARC_EC; ext 97.9 6.4E-05 1.4E-09 58.2 7.3 59 60-123 48-106 (116)
57 cd05023 S-100A11 S-100A11: S-1 97.9 0.00013 2.8E-09 53.9 8.6 70 97-179 9-80 (89)
58 cd05031 S-100A10_like S-100A10 97.8 6.3E-05 1.4E-09 56.2 6.8 59 25-87 7-77 (94)
59 KOG4223 Reticulocalbin, calume 97.8 0.00019 4.1E-09 64.0 10.8 137 24-181 75-230 (325)
60 PF00036 EF-hand_1: EF hand; 97.8 1.8E-05 3.8E-10 45.3 2.7 27 99-125 2-28 (29)
61 cd00051 EFh EF-hand, calcium b 97.8 9.7E-05 2.1E-09 49.5 6.7 61 99-177 2-62 (63)
62 KOG0036 Predicted mitochondria 97.8 0.00013 2.7E-09 67.1 8.6 96 25-124 50-145 (463)
63 KOG0028 Ca2+-binding protein ( 97.7 0.00032 6.9E-09 56.3 9.3 93 29-125 72-170 (172)
64 cd00252 SPARC_EC SPARC_EC; ext 97.7 0.00014 3E-09 56.4 7.1 65 19-87 41-106 (116)
65 cd05024 S-100A10 S-100A10: A s 97.7 0.00024 5.2E-09 52.2 7.7 64 22-90 4-77 (91)
66 cd05030 calgranulins Calgranul 97.7 0.00022 4.8E-09 52.5 7.5 67 22-90 4-80 (88)
67 KOG2643 Ca2+ binding protein, 97.5 0.0011 2.5E-08 61.4 10.9 127 29-179 236-384 (489)
68 PF13405 EF-hand_6: EF-hand do 97.5 0.00011 2.4E-09 42.7 2.8 27 98-124 1-27 (31)
69 PF00036 EF-hand_1: EF hand; 97.5 0.00023 5E-09 40.7 3.8 27 62-89 2-28 (29)
70 KOG4347 GTPase-activating prot 97.4 0.00053 1.1E-08 66.5 8.1 102 16-119 494-612 (671)
71 PF14658 EF-hand_9: EF-hand do 97.4 0.00061 1.3E-08 46.7 5.8 61 64-125 2-64 (66)
72 KOG0041 Predicted Ca2+-binding 97.3 0.0014 3.1E-08 54.6 8.7 99 19-121 92-199 (244)
73 PF12763 EF-hand_4: Cytoskelet 97.3 0.00022 4.8E-09 54.1 3.8 67 19-90 3-72 (104)
74 PF14658 EF-hand_9: EF-hand do 97.3 0.0009 2E-08 45.9 6.3 63 101-179 2-64 (66)
75 PF13833 EF-hand_8: EF-hand do 97.3 0.00074 1.6E-08 44.6 5.3 52 110-179 1-53 (54)
76 PF13202 EF-hand_5: EF hand; P 97.3 0.00031 6.7E-09 38.6 2.7 23 100-122 2-24 (25)
77 KOG0751 Mitochondrial aspartat 97.2 0.0035 7.6E-08 59.0 10.2 100 20-125 30-136 (694)
78 cd05030 calgranulins Calgranul 97.1 0.0024 5.3E-08 46.9 7.0 67 62-128 10-82 (88)
79 PF09069 EF-hand_3: EF-hand; 97.0 0.0046 1E-07 45.3 7.8 82 96-188 2-84 (90)
80 PRK12309 transaldolase/EF-hand 97.0 0.0033 7.1E-08 59.1 8.4 56 59-128 333-388 (391)
81 KOG0040 Ca2+-binding actin-bun 96.9 0.018 3.9E-07 60.9 13.4 101 18-123 2245-2359(2399)
82 KOG0030 Myosin essential light 96.8 0.015 3.3E-07 45.7 9.6 104 60-179 11-116 (152)
83 cd05024 S-100A10 S-100A10: A s 96.7 0.018 3.8E-07 42.4 8.9 67 99-179 10-76 (91)
84 KOG0031 Myosin regulatory ligh 96.7 0.03 6.5E-07 44.9 10.4 95 63-179 35-129 (171)
85 KOG4065 Uncharacterized conser 96.4 0.017 3.6E-07 43.9 7.1 77 95-175 65-141 (144)
86 PF13202 EF-hand_5: EF hand; P 96.4 0.0061 1.3E-07 33.4 3.4 23 63-86 2-24 (25)
87 PF08414 NADPH_Ox: Respiratory 96.3 0.011 2.4E-07 43.6 5.5 66 24-94 28-97 (100)
88 PF14788 EF-hand_10: EF hand; 96.2 0.023 5E-07 36.7 5.8 48 78-125 2-49 (51)
89 KOG0038 Ca2+-binding kinase in 96.2 0.019 4.2E-07 45.4 6.4 83 42-125 84-177 (189)
90 KOG0377 Protein serine/threoni 96.1 0.016 3.4E-07 54.0 6.6 65 61-126 548-616 (631)
91 PRK12309 transaldolase/EF-hand 95.9 0.016 3.5E-07 54.5 6.1 54 26-91 334-387 (391)
92 KOG4251 Calcium binding protei 95.9 0.052 1.1E-06 46.8 8.4 124 43-185 213-353 (362)
93 KOG0046 Ca2+-binding actin-bun 95.9 0.018 4E-07 54.7 6.0 67 17-88 10-84 (627)
94 KOG0041 Predicted Ca2+-binding 95.8 0.042 9E-07 46.0 7.0 67 61-128 100-166 (244)
95 PF13405 EF-hand_6: EF-hand do 95.7 0.02 4.3E-07 33.0 3.7 26 62-88 2-27 (31)
96 KOG0169 Phosphoinositide-speci 95.4 0.23 5E-06 49.7 11.9 141 19-179 129-274 (746)
97 smart00054 EFh EF-hand, calciu 95.2 0.032 6.9E-07 30.3 3.4 27 99-125 2-28 (29)
98 KOG4251 Calcium binding protei 95.1 0.12 2.5E-06 44.7 7.7 61 24-88 99-167 (362)
99 PF10591 SPARC_Ca_bdg: Secrete 94.9 0.032 7E-07 43.0 3.8 59 59-120 53-111 (113)
100 PF14788 EF-hand_10: EF hand; 94.7 0.059 1.3E-06 34.9 3.8 44 46-90 2-50 (51)
101 KOG2562 Protein phosphatase 2 94.4 0.27 5.7E-06 46.5 8.8 143 27-190 175-359 (493)
102 PF10591 SPARC_Ca_bdg: Secrete 93.8 0.03 6.5E-07 43.2 1.3 63 19-85 47-112 (113)
103 PF12763 EF-hand_4: Cytoskelet 93.6 0.38 8.2E-06 36.5 6.9 63 62-128 12-74 (104)
104 smart00054 EFh EF-hand, calciu 92.7 0.22 4.7E-06 26.8 3.5 26 62-88 2-27 (29)
105 KOG0751 Mitochondrial aspartat 92.5 0.86 1.9E-05 43.5 9.0 85 30-125 112-207 (694)
106 KOG3866 DNA-binding protein of 91.8 0.16 3.6E-06 45.3 3.2 75 101-179 248-324 (442)
107 KOG0039 Ferric reductase, NADH 88.9 1.2 2.5E-05 45.2 6.9 93 75-184 2-94 (646)
108 KOG0040 Ca2+-binding actin-bun 88.4 0.78 1.7E-05 49.3 5.3 62 63-125 2256-2324(2399)
109 KOG4286 Dystrophin-like protei 87.2 2.9 6.4E-05 42.0 8.1 117 62-190 472-591 (966)
110 PF09279 EF-hand_like: Phospho 87.1 1.2 2.6E-05 31.9 4.3 67 99-179 2-69 (83)
111 KOG1955 Ral-GTPase effector RA 85.5 1.9 4.2E-05 41.1 5.8 69 19-91 224-295 (737)
112 KOG1265 Phospholipase C [Lipid 84.8 21 0.00047 37.0 12.8 126 42-179 161-299 (1189)
113 KOG0046 Ca2+-binding actin-bun 84.0 3.3 7.1E-05 40.0 6.6 66 98-179 20-85 (627)
114 KOG4578 Uncharacterized conser 82.7 1.1 2.4E-05 40.6 2.8 64 61-125 334-398 (421)
115 KOG0042 Glycerol-3-phosphate d 80.4 2.9 6.2E-05 40.9 4.8 74 19-96 586-664 (680)
116 KOG1707 Predicted Ras related/ 79.9 13 0.00027 36.8 9.0 107 17-126 186-344 (625)
117 PF09279 EF-hand_like: Phospho 79.8 4.6 0.0001 28.8 4.9 62 62-125 2-69 (83)
118 KOG4666 Predicted phosphate ac 79.2 4.6 0.0001 36.7 5.4 95 26-125 259-359 (412)
119 KOG4578 Uncharacterized conser 78.7 1.4 3.1E-05 39.9 2.1 69 96-181 332-400 (421)
120 PF05517 p25-alpha: p25-alpha 77.2 6.2 0.00014 32.1 5.4 28 61-89 42-69 (154)
121 KOG0035 Ca2+-binding actin-bun 75.5 20 0.00043 37.3 9.4 99 19-121 740-848 (890)
122 KOG0169 Phosphoinositide-speci 74.3 17 0.00037 36.9 8.4 66 59-125 135-200 (746)
123 PLN02952 phosphoinositide phos 74.0 23 0.00051 35.4 9.3 93 75-179 14-110 (599)
124 KOG4065 Uncharacterized conser 73.3 7.6 0.00017 29.7 4.5 57 64-121 71-141 (144)
125 KOG1029 Endocytic adaptor prot 73.0 9.6 0.00021 38.7 6.3 67 19-90 9-78 (1118)
126 PF12174 RST: RCD1-SRO-TAF4 (R 72.8 12 0.00026 26.1 5.1 51 75-128 6-56 (70)
127 TIGR01848 PHA_reg_PhaR polyhyd 72.2 7.9 0.00017 29.2 4.3 69 104-180 10-78 (107)
128 KOG3555 Ca2+-binding proteogly 72.2 11 0.00023 34.7 5.9 96 20-123 201-308 (434)
129 PF09068 EF-hand_2: EF hand; 71.3 13 0.00029 29.1 5.7 95 16-125 31-125 (127)
130 KOG3555 Ca2+-binding proteogly 71.1 7.1 0.00015 35.8 4.5 62 96-179 249-310 (434)
131 KOG4301 Beta-dystrobrevin [Cyt 70.0 13 0.00028 34.0 5.9 106 62-181 112-217 (434)
132 cd07313 terB_like_2 tellurium 67.0 24 0.00052 26.1 6.2 78 43-123 13-98 (104)
133 KOG1707 Predicted Ras related/ 63.3 13 0.00028 36.8 4.9 90 16-109 305-398 (625)
134 PF07879 PHB_acc_N: PHB/PHA ac 63.2 6.3 0.00014 26.7 2.0 47 104-152 10-56 (64)
135 PF08726 EFhand_Ca_insen: Ca2+ 60.3 11 0.00023 26.3 2.8 54 26-85 6-65 (69)
136 KOG2243 Ca2+ release channel ( 58.4 43 0.00093 36.7 7.8 59 102-179 4062-4120(5019)
137 KOG0493 Transcription factor E 58.3 19 0.00042 31.6 4.6 49 12-68 245-296 (342)
138 PF08726 EFhand_Ca_insen: Ca2+ 55.6 11 0.00025 26.1 2.3 28 95-123 4-31 (69)
139 PF14513 DAG_kinase_N: Diacylg 48.9 40 0.00088 26.9 4.8 36 75-110 46-82 (138)
140 KOG1029 Endocytic adaptor prot 48.2 22 0.00047 36.3 3.8 65 22-90 191-258 (1118)
141 PF01023 S_100: S-100/ICaBP ty 47.9 42 0.00091 20.9 3.8 34 23-57 3-36 (44)
142 PF00404 Dockerin_1: Dockerin 46.5 25 0.00054 18.2 2.2 17 107-123 1-17 (21)
143 PF06163 DUF977: Bacterial pro 46.5 84 0.0018 24.6 6.0 51 18-72 3-53 (127)
144 PF00046 Homeobox: Homeobox do 46.4 76 0.0016 20.4 5.3 42 18-67 5-49 (57)
145 PF13171 DUF4004: Protein of u 46.2 1.7E+02 0.0038 24.8 8.3 89 17-129 44-148 (199)
146 PF05042 Caleosin: Caleosin re 44.2 86 0.0019 26.0 6.1 61 63-125 99-166 (174)
147 cd07316 terB_like_DjlA N-termi 37.9 1.6E+02 0.0035 21.5 7.3 58 62-122 38-98 (106)
148 PF04783 DUF630: Protein of un 37.5 35 0.00076 23.0 2.4 17 1-17 1-17 (60)
149 PF05517 p25-alpha: p25-alpha 37.0 2.3E+02 0.0049 23.0 7.9 66 63-129 2-73 (154)
150 TIGR01565 homeo_ZF_HD homeobox 36.2 56 0.0012 21.8 3.2 42 17-59 5-46 (58)
151 smart00549 TAFH TAF homology. 35.4 1.8E+02 0.0039 21.4 5.9 49 117-179 3-51 (92)
152 PF05042 Caleosin: Caleosin re 35.3 65 0.0014 26.7 4.1 30 96-125 95-124 (174)
153 PF09107 SelB-wing_3: Elongati 34.9 65 0.0014 20.7 3.3 31 43-73 8-38 (50)
154 PF09069 EF-hand_3: EF-hand; 32.7 2E+02 0.0043 21.1 6.5 56 26-88 3-74 (90)
155 TIGR02675 tape_meas_nterm tape 32.2 87 0.0019 21.9 3.9 46 19-69 9-54 (75)
156 cd08330 CARD_ASC_NALP1 Caspase 31.4 85 0.0018 22.4 3.8 54 110-186 26-80 (82)
157 KOG0488 Transcription factor B 30.1 1.2E+02 0.0027 27.7 5.5 47 14-68 173-222 (309)
158 PF00325 Crp: Bacterial regula 29.7 71 0.0015 18.5 2.5 27 46-72 3-29 (32)
159 cd08327 CARD_RAIDD Caspase act 29.5 1.2E+02 0.0026 22.4 4.4 57 110-189 32-88 (94)
160 PLN02952 phosphoinositide phos 28.2 3.3E+02 0.0071 27.5 8.5 80 43-124 14-109 (599)
161 KOG4629 Predicted mechanosensi 26.1 1.3E+02 0.0028 31.0 5.3 62 60-129 404-465 (714)
162 PF13720 Acetyltransf_11: Udp 24.6 2E+02 0.0044 20.5 4.8 47 19-71 27-76 (83)
163 KOG4004 Matricellular protein 23.1 37 0.00081 28.7 0.8 46 75-122 202-247 (259)
164 KOG0842 Transcription factor t 22.8 77 0.0017 28.9 2.8 42 19-68 159-203 (307)
165 KOG4347 GTPase-activating prot 21.9 1.3E+02 0.0028 30.3 4.3 51 78-128 535-586 (671)
166 PF07531 TAFH: NHR1 homology t 21.1 3.6E+02 0.0077 20.1 6.3 48 118-179 5-52 (96)
No 1
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=100.00 E-value=1.5e-37 Score=272.91 Aligned_cols=313 Identities=50% Similarity=0.826 Sum_probs=237.1
Q ss_pred CCCCCCCCCccchhhccCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc------hhHHHHHHHHhccCCC
Q 020286 1 MGNSQPPPANPRFVSASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQKRN 74 (328)
Q Consensus 1 MG~~~S~~~~~~l~~~~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~------~~~~~~lf~~~d~~~~ 74 (328)
|||+.|++..-+ ..+.++...|-+..+..... .....+.+.+..++... ....++.|........
T Consensus 1 mgn~n~kr~~~~------~~naE~~~~l~~~kk~~~~g---a~~k~t~dq~v~~~~~~~~~~l~e~~~q~~f~~vk~~~q 71 (427)
T KOG2557|consen 1 MGNSNSKRVDHR------FINAETQKKLDDLKKLFVSG---ASNKQTNDQYVSYPVFQEYFGLSESLGQRMFDMVKQRRQ 71 (427)
T ss_pred CCCccccccccc------ccCHHHHHHHHHHhhccccc---cchhhhhhhhhhcccccchhhhhhhccceEeeeccCccC
Confidence 899988873321 23344433333333332111 12456677777665442 3344566665544332
Q ss_pred CCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhc
Q 020286 75 DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAA 154 (328)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 154 (328)
+..+.++.+....+...+++.+++.+.++...|.+++|....+++.+.+..++...+..+.+......-..+...+....
T Consensus 72 ~~~~~l~k~~~~~~~~~~gt~dq~a~mL~~~~~~sgn~~~~~~q~eQ~~~~vlks~~~~ess~~es~~~~~~d~af~~~~ 151 (427)
T KOG2557|consen 72 DDKMTLEKLVIAKATYEKGTDDQIAEMLYQTLDVNGNGVLSRSQLEQFLVVVLKSVFSTESSDAESSDYKKMDDAFLNAA 151 (427)
T ss_pred CccchHHHHhhHHhhhccCcccHHHHHHHHHHhhccccccchhHHHHHHHHHhhheeeecccchhhhhhhhhhccccchh
Confidence 66899999999888888899999999999999999999999999999999998887765544433222223333332222
Q ss_pred cccccCcCCCCCCCCHHHHHHHHHhcchhHHhhcccccCCCCCCCCCCCCcccCCCCCccCcccCCHHHHHHHHhcCCCC
Q 020286 155 TFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLLTPPDPGRPGCQVPRLLCSENVHSSMLLLRKEYAWHIGGALSPH 234 (328)
Q Consensus 155 ~~~~~~~~~~dg~Is~~ef~~~~~~~p~~~~~l~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~il~~~~~~~l~~~lp~~ 234 (328)
.+.+.+. .-.+...+|.|..|+-..|.+.+++.+.|.++....+...+|.|..++..++.-.++..++++.|..+||..
T Consensus 152 ~~~ke~e-~t~p~~~le~~~s~~p~f~~i~r~~fs~L~~~~g~sk~pil~~l~~~~~~sh~~~~i~~~~~l~in~~lp~~ 230 (427)
T KOG2557|consen 152 TFSKEDE-GTEPGMSLEDFRSWCPFFPTIRKFLFSLLMPPSGVSKGPILPHLLYEDSVSHDRLLIKKEYALHINGALPHH 230 (427)
T ss_pred hhccccc-cCCCchhHHHHhhhchHHHHHHHHHHHHhccccCCccCccccccccccccccccceeecchhheecccCCcc
Confidence 2222211 022345667777777667788888888888877776777778787777777777888899999999999999
Q ss_pred cCCCcEEeeecCcccccHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCcccCCCeecCCceEEEEEcCCceEeccCC
Q 020286 235 ELEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYGDMKSFLFQLYPKLAIYRPTG 314 (328)
Q Consensus 235 ~~~~~~lly~~~~~G~s~~~~~~~~~~~~~p~~~~i~~~~~~ifG~~~~~~w~~~~~~~g~~~~flf~l~p~~~~~~~~~ 314 (328)
...+|++||+++.||-|+++|..++.+. |||++||++.+|+|||+|++++|...+.|+||.+||||+|+|+..||++||
T Consensus 231 ~r~~wr~lysss~~gqsfSt~l~~~~~~-gp~v~vI~d~d~~vFGgyASq~we~~pQF~Gd~~~fLfqL~Pkma~y~aTg 309 (427)
T KOG2557|consen 231 ERVEWKLLYSSSVHGQSFSTFLGHTSGM-GPSVLIIKDTEGYVFGGYASQPWERYPQFYGDMKSFLFQLNPKMAIYRATG 309 (427)
T ss_pred hhhceeeeeeecccccchhhhhhhccCC-CCeEEEEEcCCCceecccccCcccccCccCCccceeeeeecchheeecccC
Confidence 9999999999999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEecC
Q 020286 315 ANSNLQWVYV 324 (328)
Q Consensus 315 ~n~~~~~~~~ 324 (328)
.|+||||.|-
T Consensus 310 yn~~yqylN~ 319 (427)
T KOG2557|consen 310 YNTNYQYLNF 319 (427)
T ss_pred CccceEEecc
Confidence 9999999884
No 2
>smart00584 TLDc domain in TBC and LysM domain containing proteins.
Probab=99.95 E-value=2e-27 Score=197.30 Aligned_cols=111 Identities=36% Similarity=0.560 Sum_probs=104.3
Q ss_pred cccCCHHHHHHHHhcCCCCc-CCCcEEeeecCcccccHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCcccCCCeec
Q 020286 216 MLLLRKEYAWHIGGALSPHE-LEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYG 294 (328)
Q Consensus 216 ~~il~~~~~~~l~~~lp~~~-~~~~~lly~~~~~G~s~~~~~~~~~~~~~p~~~~i~~~~~~ifG~~~~~~w~~~~~~~g 294 (328)
+.||++++++.|+.+||... ..+|+|||++++||+|+++|+++|.++++|||+||++.++.|||||++++|+.+..|||
T Consensus 1 ~~iL~~~~~~~l~~~lP~~~~~~~~~llyss~~~G~s~~~~~~~~~~~~~P~lliik~~~~~ifGaf~~~~w~~~~~~~G 80 (165)
T smart00584 1 SSILSEEILALINSHLPTRAEGYPWTLLYSSSQHGYSLNTLYRKVEGYRPPTLLIIKDTDGEVFGAYASQAWRVSDHFYG 80 (165)
T ss_pred CccCCHHHHHHHHHhCCHhHhCCCeEEEEEcCcCCccHHHHHHHhcccCCCEEEEEEeCCCCEEEEEcCCCCccCCcEEC
Confidence 35899999999999999985 56799999999999999999999999878999999999999999999999999899999
Q ss_pred CCceEEEEEcCCceEeccCCCCC-cEEEecCCC
Q 020286 295 DMKSFLFQLYPKLAIYRPTGANS-NLQWVYVYL 326 (328)
Q Consensus 295 ~~~~flf~l~p~~~~~~~~~~n~-~~~~~~~~~ 326 (328)
+++||||++.|.+++|+|++.|+ +|++|+..-
T Consensus 81 ~~~sFLF~l~p~~~~y~~~~~n~~~~~~~~~~~ 113 (165)
T smart00584 81 TGESFLFQLNPKFVVYDWTGKNKYYYINGTPDS 113 (165)
T ss_pred CCCeEEEEEcCCceEEcccccCcEEEEecCCCe
Confidence 99999999999999999999997 999987653
No 3
>KOG2372 consensus Oxidation resistance protein [Replication, recombination and repair]
Probab=99.94 E-value=3.9e-27 Score=195.71 Aligned_cols=117 Identities=26% Similarity=0.560 Sum_probs=110.8
Q ss_pred CccCcccCCHHHHHHHHhcCCCCc-CC-CcEEeeecCcccccHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCcccC
Q 020286 212 VHSSMLLLRKEYAWHIGGALSPHE-LE-EWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERH 289 (328)
Q Consensus 212 ~~~~~~il~~~~~~~l~~~lp~~~-~~-~~~lly~~~~~G~s~~~~~~~~~~~~~p~~~~i~~~~~~ifG~~~~~~w~~~ 289 (328)
....+.||+++++..|..+||.+. .. +|+|+|++.+||+|+++||+++..-..|.++|||+.+|.|||||.+.+.+++
T Consensus 72 ~~~~~~ll~~~~~~~l~e~lp~R~q~~~pW~liyst~~hG~Sl~TlY~~~~~~~~p~lLvird~dg~vFGa~~~~~i~p~ 151 (241)
T KOG2372|consen 72 LRYKSQLLTPEMIRQLREHLPPRVQGYTPWRLIYSTEKHGFSLRTLYRSMAELDEPVLLVIRDTDGDVFGAFVSDAIRPN 151 (241)
T ss_pred cccccccCCHHHHHHHHhhCCcceeeecchhhhcccccccccHHHHHHhhhcccCcEEEEEEcCCCCEeeEeeccceecc
Confidence 335788999999999999999996 44 9999999999999999999999999899999999999999999999999999
Q ss_pred CCeecCCceEEEEEcC--CceEeccCCCCCcEEEecCCCCC
Q 020286 290 GDFYGDMKSFLFQLYP--KLAIYRPTGANSNLQWVYVYLFS 328 (328)
Q Consensus 290 ~~~~g~~~~flf~l~p--~~~~~~~~~~n~~~~~~~~~~~~ 328 (328)
++|||++++|||++.| .+++|+|||.|++|+||+..++|
T Consensus 152 dhyyGtgetFLft~~~~~e~~vy~~TG~n~f~i~c~~dfLa 192 (241)
T KOG2372|consen 152 DHYYGTGETFLFTFFPGREFKVYRWTGDNSFFIYCDKDFLA 192 (241)
T ss_pred CCcCCCCCeEEEEecCCCceeEeeecCCcceEEEechhHhh
Confidence 9999999999999999 89999999999999999988775
No 4
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.90 E-value=9.3e-23 Score=170.18 Aligned_cols=175 Identities=20% Similarity=0.359 Sum_probs=140.6
Q ss_pred CCCCCCCCCc---cchhhccCC----CCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc-hhHHHHHHHHhccC
Q 020286 1 MGNSQPPPAN---PRFVSASRS----FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-GALGERMFNLVTQK 72 (328)
Q Consensus 1 MG~~~S~~~~---~~l~~~~~~----fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-~~~~~~lf~~~d~~ 72 (328)
||+..|+... .+-....+. |+.+||.+|+.+|.+++.+. ++|.+++++|..++... ++++++|++.++.+
T Consensus 1 Mg~~~s~~~~~~~~~~~~~~~~~~~~fs~~EI~~L~~rF~kl~~~~--~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~ 78 (187)
T KOG0034|consen 1 MGNLSSTLLSDEDLEELQMYTGDPTQFSANEIERLYERFKKLDRNN--GDGYLTKEEFLSIPELALNPLADRIIDRFDTD 78 (187)
T ss_pred CCcccccccchhhhHHHHhccCCCcccCHHHHHHHHHHHHHhcccc--ccCccCHHHHHHHHHHhcCcHHHHHHHHHhcc
Confidence 9999998632 222344445 99999999999999999863 67999999999998665 99999999999998
Q ss_pred CCCCc-eeHHHHHHHHHhhc-CCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHH
Q 020286 73 RNDHK-LTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVF 150 (328)
Q Consensus 73 ~~~g~-I~f~eF~~~l~~~~-~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l 150 (328)
+ ++. |+|++|+.+++.+. +...++|++++|++||.+++|+|+++|+.+++..+++.- ...+++.++.+
T Consensus 79 ~-~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~---------~~~~~e~~~~i 148 (187)
T KOG0034|consen 79 G-NGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGEN---------DDMSDEQLEDI 148 (187)
T ss_pred C-CCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccC---------CcchHHHHHHH
Confidence 8 776 99999999999998 445566999999999999999999999999999987741 11133444444
Q ss_pred HHhccccccCcCCCCCCCCHHHHHHHHHhcchhHHhhcc
Q 020286 151 LNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGG 189 (328)
Q Consensus 151 ~~~~~~~~~~~~~~dg~Is~~ef~~~~~~~p~~~~~l~~ 189 (328)
.+. .+.+.|. ++||.|+++||.+.+.+.|.+.+.+..
T Consensus 149 ~d~-t~~e~D~-d~DG~IsfeEf~~~v~~~P~~~~~m~~ 185 (187)
T KOG0034|consen 149 VDK-TFEEADT-DGDGKISFEEFCKVVEKQPDLLEKMTI 185 (187)
T ss_pred HHH-HHHHhCC-CCCCcCcHHHHHHHHHcCccHHHHcCC
Confidence 443 2333455 499999999999999999999988754
No 5
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.90 E-value=8.4e-23 Score=170.45 Aligned_cols=178 Identities=18% Similarity=0.339 Sum_probs=151.1
Q ss_pred CCCC-CCCCCccch--hhccCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC------chhHHHHHHHHhcc
Q 020286 1 MGNS-QPPPANPRF--VSASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------KGALGERMFNLVTQ 71 (328)
Q Consensus 1 MG~~-~S~~~~~~l--~~~~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~------~~~~~~~lf~~~d~ 71 (328)
||.. .++.+.+.+ +...|.|+++|++.+++.|..-++ +|.++.++|..++.. +..+++.+|+.+|.
T Consensus 1 m~~~~~~~~~~~~~e~l~~~t~f~~~ei~~~Yr~Fk~~cP-----~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~ 75 (193)
T KOG0044|consen 1 MGKKSNSKLQPESLEQLVQQTKFSKKEIQQWYRGFKNECP-----SGRLTLEEFREIYASFFPDGDASKYAELVFRTFDK 75 (193)
T ss_pred CCccccccCCcHHHHHHHHhcCCCHHHHHHHHHHhcccCC-----CCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcc
Confidence 6776 566654433 345669999999999999999554 799999999987554 25689999999999
Q ss_pred CCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHH
Q 020286 72 KRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFL 151 (328)
Q Consensus 72 ~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 151 (328)
++ +|.|+|.||+++++..++++.+++++.+|++||.|++|+|+++|+..++.+++.+......+ .....+++.++.++
T Consensus 76 ~~-dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~-~~~~~~~~~v~~if 153 (193)
T KOG0044|consen 76 NK-DGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALP-EDEETPEERVDKIF 153 (193)
T ss_pred cC-CCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCC-cccccHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999999886543333 34567789999999
Q ss_pred HhccccccCcCCCCCCCCHHHHHHHHHhcchhHHhhcccc
Q 020286 152 NAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLL 191 (328)
Q Consensus 152 ~~~~~~~~~~~~~dg~Is~~ef~~~~~~~p~~~~~l~~~l 191 (328)
+++ +.+ +||.||++||+..+...|.+.+.++...
T Consensus 154 ~k~--D~n----~Dg~lT~eef~~~~~~d~~i~~~l~~~~ 187 (193)
T KOG0044|consen 154 SKM--DKN----KDGKLTLEEFIEGCKADPSILRALEQDP 187 (193)
T ss_pred HHc--CCC----CCCcccHHHHHHHhhhCHHHHHHhhhcc
Confidence 987 433 8999999999999999999988887653
No 6
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.84 E-value=8.3e-20 Score=147.41 Aligned_cols=143 Identities=16% Similarity=0.348 Sum_probs=126.9
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhh---cC--chhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 16 ASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYF---GL--KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 16 ~~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~---~~--~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
.-+.|+++|+++++++|..+|.+ ++|.|++.+|..++ |. +..++.+++..++. + .+.|+|.+|+.+++..
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d---~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~-~~~idf~~Fl~~ms~~ 84 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRD---SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-G-NETVDFPEFLTVMSVK 84 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcC---CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-C-CCccCHHHHHHHHHHH
Confidence 34589999999999999999998 79999999999886 43 27789999999998 6 8999999999999988
Q ss_pred c-CCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCC
Q 020286 91 E-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMS 169 (328)
Q Consensus 91 ~-~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is 169 (328)
. +...+++++.+|++||.|++|+|+..||+.+++. .|+...++.++.++..+ +. +++|.|+
T Consensus 85 ~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~------------lge~~~deev~~ll~~~--d~----d~dG~i~ 146 (160)
T COG5126 85 LKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKS------------LGERLSDEEVEKLLKEY--DE----DGDGEID 146 (160)
T ss_pred hccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHh------------hcccCCHHHHHHHHHhc--CC----CCCceEe
Confidence 7 6777999999999999999999999999999986 57888899999999975 33 3899999
Q ss_pred HHHHHHHHHhcc
Q 020286 170 FEDFRSWCTLIP 181 (328)
Q Consensus 170 ~~ef~~~~~~~p 181 (328)
+++|...+...|
T Consensus 147 ~~eF~~~~~~~~ 158 (160)
T COG5126 147 YEEFKKLIKDSP 158 (160)
T ss_pred HHHHHHHHhccC
Confidence 999999887765
No 7
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair]
Probab=99.81 E-value=2.2e-20 Score=148.36 Aligned_cols=115 Identities=26% Similarity=0.454 Sum_probs=106.9
Q ss_pred cCcccCCHHHHHHHHhcCCCCc--CCCcEEeeecCcccccHHHHHHhhcCCCCC-----EEEEEEcCCCcEEEEeeCCCc
Q 020286 214 SSMLLLRKEYAWHIGGALSPHE--LEEWKLLYHSAMNGLSFNTFLGSISNDEGS-----AVLIIKDKEGHIYGGYASQPW 286 (328)
Q Consensus 214 ~~~~il~~~~~~~l~~~lp~~~--~~~~~lly~~~~~G~s~~~~~~~~~~~~~p-----~~~~i~~~~~~ifG~~~~~~w 286 (328)
-...||+++++..|...||.++ ...|+||||..+||+|+++|+..|..-+.| +|++|||++|.|||||.++..
T Consensus 32 ~K~~llt~e~~~~ire~lp~Ry~~~t~W~llySl~~~G~Sl~t~y~~~~~~~~~frrvg~VLa~rd~dgd~FGaf~~d~~ 111 (212)
T COG5142 32 YKASLLTEEIVTRIRESLPDRYKYSTSWRLLYSLFENGFSLRTFYESFGENEWPFRRVGFVLACRDKDGDLFGAFFEDRI 111 (212)
T ss_pred hhcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcchhHHHHHHHhCcccCcccCceEEEEEEcCCCCEeeeechhhe
Confidence 3567999999999999999996 699999999999999999999999977667 999999999999999999999
Q ss_pred ccCCCeecCCceEEEEE--cC-------CceEeccCCCCCcEEEecCCCCC
Q 020286 287 ERHGDFYGDMKSFLFQL--YP-------KLAIYRPTGANSNLQWVYVYLFS 328 (328)
Q Consensus 287 ~~~~~~~g~~~~flf~l--~p-------~~~~~~~~~~n~~~~~~~~~~~~ 328 (328)
++..+|||++++|||++ -| ++.+|+.+|.+..-+||...|+|
T Consensus 112 ~pa~hy~G~~e~FLwk~~~~p~~~~~~k~~~~yp~~g~~~f~iYCt~~Fla 162 (212)
T COG5142 112 RPARHYYGRDEMFLWKAARRPADRLADKEVAVYPISGGKGFGIYCTPDFLA 162 (212)
T ss_pred eccCCCCCCccEEEEeeccCCccccCcceeEEeEeecCCceEEEEchHHhh
Confidence 99999999999999999 33 68899999999999999988775
No 8
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.80 E-value=1e-18 Score=135.46 Aligned_cols=172 Identities=17% Similarity=0.286 Sum_probs=141.3
Q ss_pred CCCCCCCCCccch--hhccCCCCHHHHHHHHHHHHHHhhccCCC--------CCCCCHHHHHhhhcCc-hhHHHHHHHHh
Q 020286 1 MGNSQPPPANPRF--VSASRSFAQHELEDLKSLFKSLAAQSQSN--------GRYISPSIFQAYFGLK-GALGERMFNLV 69 (328)
Q Consensus 1 MG~~~S~~~~~~l--~~~~~~fs~~ei~~l~~~F~~l~~~~~~~--------~g~i~~~~f~~~~~~~-~~~~~~lf~~~ 69 (328)
|||++....+++| .+.+|.|+.++|-+|++.|..+.++...- .-.++.+.+.++..+. +|+-+||...|
T Consensus 1 MGNK~~vFT~eqLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMPELkenpfk~ri~e~F 80 (189)
T KOG0038|consen 1 MGNKQTVFTEEQLDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMPELKENPFKRRICEVF 80 (189)
T ss_pred CCCccceeeHHHHhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhChhhhcChHHHHHHHHh
Confidence 9999999999988 48899999999999999999998763221 2256677777777765 89999999999
Q ss_pred ccCCCCCceeHHHHHHHHHhhcCC-CHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHH
Q 020286 70 TQKRNDHKLTFEDLVVAKATYEKG-TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVD 148 (328)
Q Consensus 70 d~~~~~g~I~f~eF~~~l~~~~~~-~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 148 (328)
..++ .|.++|++|+.+++.++.. ..+-|+.++|++||-|+|+.|..++|...++.+... +.+...++.+++
T Consensus 81 SeDG-~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~-------eLs~eEv~~i~e 152 (189)
T KOG0038|consen 81 SEDG-RGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRD-------ELSDEEVELICE 152 (189)
T ss_pred ccCC-CCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhc-------cCCHHHHHHHHH
Confidence 9999 9999999999999999954 446799999999999999999999999999886553 222333445566
Q ss_pred HHHHhccccccCcCCCCCCCCHHHHHHHHHhcchhHHh
Q 020286 149 VFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKF 186 (328)
Q Consensus 149 ~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~~p~~~~~ 186 (328)
.++.++ |. ++||++++.+|++.+.+.|.++.-
T Consensus 153 kvieEA-----D~-DgDgkl~~~eFe~~i~raPDFlsT 184 (189)
T KOG0038|consen 153 KVIEEA-----DL-DGDGKLSFAEFEHVILRAPDFLST 184 (189)
T ss_pred HHHHHh-----cC-CCCCcccHHHHHHHHHhCcchHhh
Confidence 666654 44 599999999999999999987643
No 9
>PF07534 TLD: TLD; InterPro: IPR006571 TLDc is a domain of unknown function, restricted to eukaryotes, and commonly found in TBC (IPR000195 from INTERPRO) and LysM (IPR002482 from INTERPRO) domain containing proteins [].; PDB: 4ACJ_A.
Probab=99.80 E-value=1.4e-19 Score=146.13 Aligned_cols=83 Identities=43% Similarity=0.827 Sum_probs=58.0
Q ss_pred EeeecCcccccHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCcccCC-CeecCCceEEEEEcCCceEeccCCCCCcE
Q 020286 241 LLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHG-DFYGDMKSFLFQLYPKLAIYRPTGANSNL 319 (328)
Q Consensus 241 lly~~~~~G~s~~~~~~~~~~~~~p~~~~i~~~~~~ifG~~~~~~w~~~~-~~~g~~~~flf~l~p~~~~~~~~~~n~~~ 319 (328)
|||++++||+|+++|+++|.+. +|+++|+++.+|.|||||++.+|+.+. .|+|++++|||+|.|.+++|+|++.|..|
T Consensus 1 Lly~s~~dG~s~~~f~~~~~~~-~~~l~iv~t~~g~iFG~y~~~~~~~~~~~~~~~~~~FlF~l~~~~~~~~~~~~~~~~ 79 (139)
T PF07534_consen 1 LLYSSSRDGFSFNTFHSKCDGK-GPTLLIVKTSDGQIFGAYTSQPWKSSNKGYFGDSESFLFSLEPKFKIFKWTGKNQNY 79 (139)
T ss_dssp EEEEHHHH-S-HHHHHHHHTT--S-EEEEEEETTS-EEEEEESS-----SS--B--TT-EEEE-SSS-EEEE--SS----
T ss_pred CcCccchhCcCHHHHHHhcCCC-CCEEEEEECCCCcEEEEEeCCcccccCccccCCCCeEEEEeccccceeeccccccee
Confidence 7999999999999999999976 999999999999999999999999655 49999999999999999999999999999
Q ss_pred EEecC
Q 020286 320 QWVYV 324 (328)
Q Consensus 320 ~~~~~ 324 (328)
++++.
T Consensus 80 ~~~~~ 84 (139)
T PF07534_consen 80 INCNN 84 (139)
T ss_dssp EEEET
T ss_pred eeccC
Confidence 99987
No 10
>KOG4636 consensus Uncharacterized conserved protein with TLDc domain [Function unknown]
Probab=99.76 E-value=4.7e-17 Score=144.10 Aligned_cols=210 Identities=16% Similarity=0.234 Sum_probs=145.8
Q ss_pred CCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCC-------------HHHHHHHH
Q 020286 111 DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMS-------------FEDFRSWC 177 (328)
Q Consensus 111 ~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is-------------~~ef~~~~ 177 (328)
++.+...|+..++..|..+.+.-+....+++........+.+.....++.. .-+.|. .-.|..|.
T Consensus 142 k~~~~vsev~~fL~vC~t~a~~gra~~~~c~fi~~~~~~~t~~~~~c~dS~--Sgnsi~rW~~~n~~~l~l~vgKfltwa 219 (483)
T KOG4636|consen 142 KILQPVSEVHHFLKVCSTSAGAGRAIQGDCQFIKILVEEMTDGKTGCEDSQ--SGNSIIRWRRENCEKLTLAVGKFLTWA 219 (483)
T ss_pred EEeechhHHHHHHHHHHhhhcCCchhhcCCcHHHHHHHHHhcccccccccc--cCCceeeehhhhhHHHHHHHHHHHHHH
Confidence 366788999999999998887766666677778878877777643332211 111121 11233333
Q ss_pred Hh-cchhHHhhcccccCCCCC-----CCCCCCCcccCCCCCccCcccCCHHHHHHHHhcCCCCc-------------CCC
Q 020286 178 TL-IPSARKFLGGLLTPPDPG-----RPGCQVPRLLCSENVHSSMLLLRKEYAWHIGGALSPHE-------------LEE 238 (328)
Q Consensus 178 ~~-~p~~~~~l~~~l~~~~~~-----~~~~~~p~l~~~~~~~~~~~il~~~~~~~l~~~lp~~~-------------~~~ 238 (328)
.. .|-+.+..+++.....+. ..|+ -...+..+.-.+...|++-..+|.|+..+|+.+ ..+
T Consensus 220 LmTvpcltEcqn~~c~~~lqt~~~aednPs-stavD~S~skTsed~L~plgqaW~l~~slp~~ys~eil~~pp~tsGesh 298 (483)
T KOG4636|consen 220 LMTVPCLTECQNRVCSAVLQTKIIAEDNPS-STAVDYSSSKTSEDILSPLGQAWYLQSSLPAVYSPEILAKPPETSGESH 298 (483)
T ss_pred hhccchhhhhhhhhhcceecceeecccCCC-ccccccccccccchhhhhHHHHHHHhccCCcccCchhccCCCCCCCCCc
Confidence 32 455555555554322111 1111 111222222222344566679999999998874 479
Q ss_pred cEEeeecCcccccHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCcccCCCeecCCceEEEEEcCCceEeccCCCCCc
Q 020286 239 WKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYGDMKSFLFQLYPKLAIYRPTGANSN 318 (328)
Q Consensus 239 ~~lly~~~~~G~s~~~~~~~~~~~~~p~~~~i~~~~~~ifG~~~~~~w~~~~~~~g~~~~flf~l~p~~~~~~~~~~n~~ 318 (328)
|+|||.|..||.+.++|+.+|.+|+|||++|++++++.+...-++++|+.++.+||...+.+|++.|+++++..+ .|
T Consensus 299 wtlLY~S~~HG~g~NRf~~~V~gYrgPtlvi~~tkder~~viA~~qew~e~~~~fgG~~~~~f~i~P~f~~~~~s---~N 375 (483)
T KOG4636|consen 299 WTLLYTSLQHGIGTNRFETLVFGYRGPTLVIFRTKDERVVVIAADQEWRESGNRFGGTFTSFFEIVPNFRRIDGS---AN 375 (483)
T ss_pred eeecchhhhhccchhhHHHHhccccCCeEEEEEecCCcEEEEeechhhhhhccccccccceeEEeecceEEecCC---Cc
Confidence 999999999999999999999999999999999999999999999999987766666666679999999988755 78
Q ss_pred EEEecCCC
Q 020286 319 LQWVYVYL 326 (328)
Q Consensus 319 ~~~~~~~~ 326 (328)
++|||+.+
T Consensus 376 ~~Y~nl~~ 383 (483)
T KOG4636|consen 376 SIYCNLKL 383 (483)
T ss_pred eEEEeccc
Confidence 99999764
No 11
>PTZ00183 centrin; Provisional
Probab=99.63 E-value=2.4e-14 Score=117.81 Aligned_cols=142 Identities=15% Similarity=0.242 Sum_probs=119.1
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhc---C--chhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc-C
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG---L--KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYE-K 92 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~---~--~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~ 92 (328)
.+++.++.++.+.|..+|.+ ++|.|+.++|..++. . ....+..+|..+|.++ +|.|+|++|+.++.... .
T Consensus 10 ~~~~~~~~~~~~~F~~~D~~---~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~-~g~i~~~eF~~~~~~~~~~ 85 (158)
T PTZ00183 10 GLTEDQKKEIREAFDLFDTD---GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDG-SGKIDFEEFLDIMTKKLGE 85 (158)
T ss_pred CCCHHHHHHHHHHHHHhCCC---CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC-CCcEeHHHHHHHHHHHhcC
Confidence 79999999999999999987 799999999987755 2 2567899999999998 99999999999887654 4
Q ss_pred CCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHH
Q 020286 93 GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFED 172 (328)
Q Consensus 93 ~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~e 172 (328)
...++.++.+|+.+|.+++|.|+.+|+..++..+ +.......+..++... +.+ ++|.|++++
T Consensus 86 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~------------~~~l~~~~~~~~~~~~--d~~----~~g~i~~~e 147 (158)
T PTZ00183 86 RDPREEILKAFRLFDDDKTGKISLKNLKRVAKEL------------GETITDEELQEMIDEA--DRN----GDGEISEEE 147 (158)
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh------------CCCCCHHHHHHHHHHh--CCC----CCCcCcHHH
Confidence 4456789999999999999999999999988762 3455667788888754 332 789999999
Q ss_pred HHHHHHhcch
Q 020286 173 FRSWCTLIPS 182 (328)
Q Consensus 173 f~~~~~~~p~ 182 (328)
|...+...|.
T Consensus 148 f~~~~~~~~~ 157 (158)
T PTZ00183 148 FYRIMKKTNL 157 (158)
T ss_pred HHHHHhcccC
Confidence 9999988874
No 12
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.60 E-value=3.3e-14 Score=116.46 Aligned_cols=138 Identities=15% Similarity=0.249 Sum_probs=116.5
Q ss_pred CCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc-----hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCC-
Q 020286 20 FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG- 93 (328)
Q Consensus 20 fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~- 93 (328)
++..++..++++|..+|++ ++|.|+.+++..++... ...+..+++.+|.++ +|.|+|++|+.++......
T Consensus 2 ~~~~~~~el~~~F~~fD~d---~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg-~g~I~~~eF~~l~~~~~~~~ 77 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKD---GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDG-DGTIDFEEFLDLMEKLGEEK 77 (151)
T ss_pred CCHHHHHHHHHHHHHHCCC---CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCC-CCeEcHHHHHHHHHhhhccc
Confidence 5788999999999999998 78999999999886552 557889999999999 9999999999998866532
Q ss_pred C----HHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCC
Q 020286 94 T----KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMS 169 (328)
Q Consensus 94 ~----~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is 169 (328)
. ..+.++.+|++||.|++|+|+.+||+.++.. .|.....+.++.+++.+ +. ++||.|+
T Consensus 78 ~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~------------lg~~~~~~e~~~mi~~~-----d~-d~dg~i~ 139 (151)
T KOG0027|consen 78 TDEEASSEELKEAFRVFDKDGDGFISASELKKVLTS------------LGEKLTDEECKEMIREV-----DV-DGDGKVN 139 (151)
T ss_pred ccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHH------------hCCcCCHHHHHHHHHhc-----CC-CCCCeEe
Confidence 2 2458999999999999999999999999988 35666688888888875 22 3899999
Q ss_pred HHHHHHHHHh
Q 020286 170 FEDFRSWCTL 179 (328)
Q Consensus 170 ~~ef~~~~~~ 179 (328)
|++|...+..
T Consensus 140 f~ef~~~m~~ 149 (151)
T KOG0027|consen 140 FEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHhc
Confidence 9999988754
No 13
>PTZ00184 calmodulin; Provisional
Probab=99.57 E-value=1.3e-13 Score=112.17 Aligned_cols=138 Identities=14% Similarity=0.285 Sum_probs=114.8
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhc---C--chhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc-C
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG---L--KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYE-K 92 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~---~--~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~ 92 (328)
.+++++++.+++.|..+|.+ ++|.|+.++|..++. . ....+.++|+.+|.++ +|.|+|++|+.++.... .
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~---~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~g~i~~~ef~~~l~~~~~~ 79 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKD---GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG-NGTIDFPEFLTLMARKMKD 79 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCC---CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCC-CCcCcHHHHHHHHHHhccC
Confidence 58999999999999999987 789999999997653 2 2567899999999998 99999999999987665 3
Q ss_pred CCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHH
Q 020286 93 GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFED 172 (328)
Q Consensus 93 ~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~e 172 (328)
...++.++.+|+.+|.+++|.|+.+|+..++..+ +.......+..++..+ +. +++|.|+++|
T Consensus 80 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~------------~~~~~~~~~~~~~~~~--d~----~~~g~i~~~e 141 (149)
T PTZ00184 80 TDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNL------------GEKLTDEEVDEMIREA--DV----DGDGQINYEE 141 (149)
T ss_pred CcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH------------CCCCCHHHHHHHHHhc--CC----CCCCcCcHHH
Confidence 4557789999999999999999999999988762 3345567788888764 33 3789999999
Q ss_pred HHHHHH
Q 020286 173 FRSWCT 178 (328)
Q Consensus 173 f~~~~~ 178 (328)
|...+.
T Consensus 142 f~~~~~ 147 (149)
T PTZ00184 142 FVKMMM 147 (149)
T ss_pred HHHHHh
Confidence 988764
No 14
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.46 E-value=1.8e-12 Score=101.99 Aligned_cols=138 Identities=12% Similarity=0.235 Sum_probs=112.3
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc-hhHHHHHHHHhccCCCCCceeHHHHHHHHHh-hcCCCHH
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-GALGERMFNLVTQKRNDHKLTFEDLVVAKAT-YEKGTKD 96 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~-~~~~~~~ 96 (328)
.|++.||++++++|..+|.+ ++|.|++++++..+... ....+.-.+.+-... .|.|+|.-|+.++.. ++..+++
T Consensus 25 mf~q~QIqEfKEAF~~mDqn---rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea-~gPINft~FLTmfGekL~gtdpe 100 (171)
T KOG0031|consen 25 MFDQSQIQEFKEAFNLMDQN---RDGFIDKEDLRDMLASLGKIASDEELDAMMKEA-PGPINFTVFLTMFGEKLNGTDPE 100 (171)
T ss_pred HhhHHHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC-CCCeeHHHHHHHHHHHhcCCCHH
Confidence 48999999999999999998 89999999999886552 112222333333334 889999999998854 4466678
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHH
Q 020286 97 EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSW 176 (328)
Q Consensus 97 ~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~ 176 (328)
+-+..+|+.||.+++|.|..+.|+++|.. .|+....+.|+++++.... +..|.+.|..|...
T Consensus 101 ~~I~~AF~~FD~~~~G~I~~d~lre~Ltt------------~gDr~~~eEV~~m~r~~p~------d~~G~~dy~~~~~~ 162 (171)
T KOG0031|consen 101 EVILNAFKTFDDEGSGKIDEDYLRELLTT------------MGDRFTDEEVDEMYREAPI------DKKGNFDYKAFTYI 162 (171)
T ss_pred HHHHHHHHhcCccCCCccCHHHHHHHHHH------------hcccCCHHHHHHHHHhCCc------ccCCceeHHHHHHH
Confidence 88999999999999999999999999988 4788899999999998633 24689999999988
Q ss_pred HH
Q 020286 177 CT 178 (328)
Q Consensus 177 ~~ 178 (328)
+.
T Consensus 163 it 164 (171)
T KOG0031|consen 163 IT 164 (171)
T ss_pred HH
Confidence 86
No 15
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=7.9e-12 Score=99.12 Aligned_cols=143 Identities=15% Similarity=0.229 Sum_probs=119.4
Q ss_pred cCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhh---hcC--chhHHHHHHHHhccCCCCCceeHHHHHHHHHhh-
Q 020286 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAY---FGL--KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY- 90 (328)
Q Consensus 17 ~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~---~~~--~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~- 90 (328)
...+++++-+.++..|..++.+ .+|.|+.++|... +|- +...+.++..-+|+++ .|.|+|++|+..++..
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~---~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~-~g~i~fe~f~~~mt~k~ 99 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPD---MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEG-SGKITFEDFRRVMTVKL 99 (172)
T ss_pred CccccHHHHhhHHHHHHhhccC---CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhcc-CceechHHHHHHHHHHH
Confidence 3368899999999999999987 7899999999533 333 3667889999999998 9999999999998654
Q ss_pred cCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCH
Q 020286 91 EKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSF 170 (328)
Q Consensus 91 ~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~ 170 (328)
...+..+.++.+|+++|.|++|.|+..+|+.+... .|+..+...+.+++.++ +. +++|.|+-
T Consensus 100 ~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvake------------LgenltD~El~eMIeEA-----d~-d~dgevne 161 (172)
T KOG0028|consen 100 GERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKE------------LGENLTDEELMEMIEEA-----DR-DGDGEVNE 161 (172)
T ss_pred hccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHH------------hCccccHHHHHHHHHHh-----cc-cccccccH
Confidence 45557788999999999999999999999999988 47777888888888875 33 38999999
Q ss_pred HHHHHHHHhcc
Q 020286 171 EDFRSWCTLIP 181 (328)
Q Consensus 171 ~ef~~~~~~~p 181 (328)
++|...+.+.|
T Consensus 162 eEF~~imk~t~ 172 (172)
T KOG0028|consen 162 EEFIRIMKKTS 172 (172)
T ss_pred HHHHHHHhcCC
Confidence 99999887643
No 16
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.26 E-value=3.7e-13 Score=116.86 Aligned_cols=98 Identities=22% Similarity=0.352 Sum_probs=89.5
Q ss_pred CcccCCHHHHHHHHhcCCCCc-CCCcEEeeecCcccccHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCcccC----
Q 020286 215 SMLLLRKEYAWHIGGALSPHE-LEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERH---- 289 (328)
Q Consensus 215 ~~~il~~~~~~~l~~~lp~~~-~~~~~lly~~~~~G~s~~~~~~~~~~~~~p~~~~i~~~~~~ifG~~~~~~w~~~---- 289 (328)
.|.|++-..+.-||++.|.+. ..+.-|||++-.||+|+.+|+-.|++. .||+++|++....|-|||.+..|...
T Consensus 341 rseivsvremrdiwswvperfalcqplllfsslqhgyslarfyfqcegh-eptllliktmqkevcgaylstdwsernkfg 419 (559)
T KOG2801|consen 341 RSEIVSVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGH-EPTLLLIKTMQKEVCGAYLSTDWSERNKFG 419 (559)
T ss_pred hhhhhhHHHHhhHHHhhhHHHhhhhHHHHHHHhhcchhhhhheeeccCC-CCeeehHHHHHHHHhhHhcccchhhhcccC
Confidence 567888888899999999985 678889999999999999999999998 99999999999999999999999842
Q ss_pred --CCeecCCceEEEEEcCCceEeccC
Q 020286 290 --GDFYGDMKSFLFQLYPKLAIYRPT 313 (328)
Q Consensus 290 --~~~~g~~~~flf~l~p~~~~~~~~ 313 (328)
-.|||+++||+|.|.|..+-|.|.
T Consensus 420 gklgffgtgecfvfrlqpevqryewv 445 (559)
T KOG2801|consen 420 GKLGFFGTGECFVFRLQPEVQRYEWV 445 (559)
T ss_pred ceecccccccEEEEEechhhheeeEE
Confidence 369999999999999999988886
No 17
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.21 E-value=2.8e-10 Score=103.23 Aligned_cols=137 Identities=15% Similarity=0.263 Sum_probs=116.7
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhh---cCc---hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcC
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYF---GLK---GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEK 92 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~---~~~---~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~ 92 (328)
..+++.-.+++..|+.+|.+ ++|.++..++.+.+ +.+ ...++.+|..+|.++ +|.+||+||..++.
T Consensus 7 ~~~~er~~r~~~lf~~lD~~---~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~-dg~vDy~eF~~Y~~---- 78 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSK---NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANR-DGRVDYSEFKRYLD---- 78 (463)
T ss_pred CCcHHHHHHHHHHHHHhccC---CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCc-CCcccHHHHHHHHH----
Confidence 34566667899999999987 89999999998553 333 457899999999999 99999999999987
Q ss_pred CCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHH
Q 020286 93 GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFED 172 (328)
Q Consensus 93 ~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~e 172 (328)
..|.++..+|..+|.++||.|..+|+.+.++. .+.....+.++.++..+ ++ ++.+.|+++|
T Consensus 79 -~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~------------~gi~l~de~~~k~~e~~--d~----~g~~~I~~~e 139 (463)
T KOG0036|consen 79 -NKELELYRIFQSIDLEHDGKIDPNEIWRYLKD------------LGIQLSDEKAAKFFEHM--DK----DGKATIDLEE 139 (463)
T ss_pred -HhHHHHHHHHhhhccccCCccCHHHHHHHHHH------------hCCccCHHHHHHHHHHh--cc----CCCeeeccHH
Confidence 56888999999999999999999999999987 36677788899988876 33 3788999999
Q ss_pred HHHHHHhcch
Q 020286 173 FRSWCTLIPS 182 (328)
Q Consensus 173 f~~~~~~~p~ 182 (328)
|.+++.-+|.
T Consensus 140 ~rd~~ll~p~ 149 (463)
T KOG0036|consen 140 WRDHLLLYPE 149 (463)
T ss_pred HHhhhhcCCh
Confidence 9999998883
No 18
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.11 E-value=1.7e-09 Score=83.98 Aligned_cols=138 Identities=18% Similarity=0.247 Sum_probs=108.7
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC---c--hhHHHHHHHHhccCC-CCCceeHHHHHHHHHhhcC
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---K--GALGERMFNLVTQKR-NDHKLTFEDLVVAKATYEK 92 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~---~--~~~~~~lf~~~d~~~-~~g~I~f~eF~~~l~~~~~ 92 (328)
.|+++++.+++++|..+|.. ++|+|+..+...+++. + +..+.+......++. +-.+|+|++|+-++..+.+
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~---gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vak 80 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRT---GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAK 80 (152)
T ss_pred ccCcchHHHHHHHHHHHhcc---CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHh
Confidence 57888999999999999987 8899999988876554 3 445666666665541 1478999999999998874
Q ss_pred CC---HHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCC
Q 020286 93 GT---KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMS 169 (328)
Q Consensus 93 ~~---~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is 169 (328)
.. .-+..-.-++.||++++|.|...||+.++.. .|+...+.+++.+++.. . +.+|.|.
T Consensus 81 nk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLtt------------lGekl~eeEVe~Llag~----e---D~nG~i~ 141 (152)
T KOG0030|consen 81 NKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTT------------LGEKLTEEEVEELLAGQ----E---DSNGCIN 141 (152)
T ss_pred ccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHH------------HHhhccHHHHHHHHccc----c---ccCCcCc
Confidence 32 2334445789999999999999999999988 36778889999998863 2 3679999
Q ss_pred HHHHHHHHH
Q 020286 170 FEDFRSWCT 178 (328)
Q Consensus 170 ~~ef~~~~~ 178 (328)
|+.|.+.+.
T Consensus 142 YE~fVk~i~ 150 (152)
T KOG0030|consen 142 YEAFVKHIM 150 (152)
T ss_pred HHHHHHHHh
Confidence 999988764
No 19
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.07 E-value=4.8e-09 Score=87.89 Aligned_cols=139 Identities=12% Similarity=0.209 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc------hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHH
Q 020286 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDE 97 (328)
Q Consensus 24 ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~ 97 (328)
.-..+...|...|++ +.|.|+-+++.+.+... ....+.+...||.+. +|+|+|+||......+ .
T Consensus 55 ~~~~~~~~f~~vD~d---~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~-~G~i~f~EF~~Lw~~i------~ 124 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRD---RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDN-SGTIGFKEFKALWKYI------N 124 (221)
T ss_pred ccHHHHHHHHhhCcc---ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCC-CCccCHHHHHHHHHHH------H
Confidence 456889999999998 78999999999997741 456788889999999 9999999999987633 4
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHH
Q 020286 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (328)
Q Consensus 98 ~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~ 177 (328)
..+.+|+-||.|++|.|+..||++.+.. .|-..+.+..+.++++- ++. ..+.|.+++|+..|
T Consensus 125 ~Wr~vF~~~D~D~SG~I~~sEL~~Al~~------------~Gy~Lspq~~~~lv~ky--d~~----~~g~i~FD~FI~cc 186 (221)
T KOG0037|consen 125 QWRNVFRTYDRDRSGTIDSSELRQALTQ------------LGYRLSPQFYNLLVRKY--DRF----GGGRIDFDDFIQCC 186 (221)
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHH------------cCcCCCHHHHHHHHHHh--ccc----cCCceeHHHHHHHH
Confidence 6889999999999999999999999988 47778888888888853 322 47899999999999
Q ss_pred HhcchhHHhhccc
Q 020286 178 TLIPSARKFLGGL 190 (328)
Q Consensus 178 ~~~p~~~~~l~~~ 190 (328)
..-+.+.+.+...
T Consensus 187 v~L~~lt~~Fr~~ 199 (221)
T KOG0037|consen 187 VVLQRLTEAFRRR 199 (221)
T ss_pred HHHHHHHHHHHHh
Confidence 8866665555443
No 20
>PLN02964 phosphatidylserine decarboxylase
Probab=99.05 E-value=1.3e-09 Score=106.90 Aligned_cols=103 Identities=17% Similarity=0.255 Sum_probs=88.8
Q ss_pred CCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhc--Cc----hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc
Q 020286 18 RSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG--LK----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE 91 (328)
Q Consensus 18 ~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~--~~----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~ 91 (328)
+.|+.+|++++++.|+.+|++ ++|.+ ...+...++ .+ ..+++++|+.+|.++ +|.|+|+||+.++..+.
T Consensus 135 t~f~~kqi~elkeaF~lfD~d---gdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~~D~Dg-dG~IdfdEFl~lL~~lg 209 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPS---SSNKV-VGSIFVSCSIEDPVETERSFARRILAIVDYDE-DGQLSFSEFSDLIKAFG 209 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCC---CCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCC-CCeEcHHHHHHHHHHhc
Confidence 579999999999999999998 77887 555555555 23 235899999999999 99999999999998876
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 92 KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 92 ~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
....++.++.+|+.||.|++|.|+.+||..++..
T Consensus 210 ~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 210 NLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 6667888999999999999999999999999877
No 21
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.94 E-value=8.7e-09 Score=94.97 Aligned_cols=158 Identities=16% Similarity=0.247 Sum_probs=122.6
Q ss_pred hccCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc--hhHHHHHHHHhc----cCCCCCceeHHHHHHHHH
Q 020286 15 SASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--GALGERMFNLVT----QKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 15 ~~~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~--~~~~~~lf~~~d----~~~~~g~I~f~eF~~~l~ 88 (328)
+....||-+....++-.|..+|++ .+|.|+++++..+-... ..+++|||...- ... +|++||++|+-++-
T Consensus 267 q~~~~FS~e~f~viy~kFweLD~D---hd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~~~~~~-eGrmdykdFv~Fil 342 (493)
T KOG2562|consen 267 QVTRYFSYEHFYVIYCKFWELDTD---HDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRGFTVKV-EGRMDYKDFVDFIL 342 (493)
T ss_pred hhhhheeHHHHHHHHHHHhhhccc---cccccCHHHHHHHhccchhhHHHHHHHhhccccceeee-cCcccHHHHHHHHH
Confidence 344468999999999999999998 79999999999886654 788999999332 233 88999999999988
Q ss_pred hhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCC
Q 020286 89 TYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSM 168 (328)
Q Consensus 89 ~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~I 168 (328)
.........-+++.|+++|.+++|.|+.+|++-+.+..++.+-.+. ......++.+.++++-+.. . ..+.|
T Consensus 343 A~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~---~e~l~fed~l~qi~DMvkP--~----~~~kI 413 (493)
T KOG2562|consen 343 AEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMG---QEALPFEDALCQIRDMVKP--E----DENKI 413 (493)
T ss_pred HhccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcC---CCcccHHHHHHHHHHHhCc--c----CCCce
Confidence 8876666778999999999999999999999999988777642221 2344558888888886522 2 46899
Q ss_pred CHHHHHHHHHhcchhHHh
Q 020286 169 SFEDFRSWCTLIPSARKF 186 (328)
Q Consensus 169 s~~ef~~~~~~~p~~~~~ 186 (328)
|+.+|.. ....-.+..+
T Consensus 414 tLqDlk~-skl~~~v~n~ 430 (493)
T KOG2562|consen 414 TLQDLKG-SKLAGTVFNI 430 (493)
T ss_pred eHHHHhh-ccccchhhhh
Confidence 9999987 4433433333
No 22
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.69 E-value=1.5e-07 Score=76.38 Aligned_cols=83 Identities=14% Similarity=0.206 Sum_probs=74.1
Q ss_pred CCCCCCHHHHHhhhcCc------hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccC
Q 020286 42 NGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLG 115 (328)
Q Consensus 42 ~~g~i~~~~f~~~~~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is 115 (328)
+++.|+..+|..+++.. ..-+.+.|+.||.++ +|+|+..++..++..+.....++.+..+++.+|.|++|.|+
T Consensus 68 ~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~-dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~ 146 (160)
T COG5126 68 GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDH-DGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEID 146 (160)
T ss_pred CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCC-CceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEe
Confidence 36899999999988763 456889999999999 99999999999999888777788899999999999999999
Q ss_pred HHHHHHHHHH
Q 020286 116 RSDLESVVIA 125 (328)
Q Consensus 116 ~~El~~~l~~ 125 (328)
++++.+++..
T Consensus 147 ~~eF~~~~~~ 156 (160)
T COG5126 147 YEEFKKLIKD 156 (160)
T ss_pred HHHHHHHHhc
Confidence 9999987754
No 23
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.67 E-value=2.4e-08 Score=69.51 Aligned_cols=66 Identities=12% Similarity=0.310 Sum_probs=50.8
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHH
Q 020286 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (328)
Q Consensus 98 ~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~ 177 (328)
+++.+|+.+|.|++|+|+.+||..++..+... .....++..++.+++.+ |. +++|.|+++||..++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-----D~-d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRD--------MSDEESDEMIDQIFREF-----DT-DGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--------STHHHHHHHHHHHHHHH-----TT-TSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhccc--------ccHHHHHHHHHHHHHHh-----CC-CCcCCCcHHHHhccC
Confidence 57889999999999999999999999885332 11233455666667754 34 389999999999875
No 24
>PTZ00183 centrin; Provisional
Probab=98.55 E-value=5.2e-07 Score=73.89 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=78.1
Q ss_pred HHHHHHHHHhhccCCCCCCCCHHHHHhhhcC------chhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHH
Q 020286 27 DLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEE 100 (328)
Q Consensus 27 ~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~ 100 (328)
.+...|..++.+ ++|.|+.++|...+.. ....++.+|+.+|.++ +|.|+.++|..++..+...-.++.++
T Consensus 54 ~~~~l~~~~d~~---~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~e~~~~l~~~~~~l~~~~~~ 129 (158)
T PTZ00183 54 EIKQMIADVDKD---GSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDK-TGKISLKNLKRVAKELGETITDEELQ 129 (158)
T ss_pred HHHHHHHHhCCC---CCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCC-CCcCcHHHHHHHHHHhCCCCCHHHHH
Confidence 355666667666 7899999999876432 1446789999999999 99999999999998765555677899
Q ss_pred HHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 101 FIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 101 ~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
.+|..+|.+++|.|+.+|+..++..
T Consensus 130 ~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 130 EMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 9999999999999999999888754
No 25
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.52 E-value=2.4e-07 Score=64.40 Aligned_cols=61 Identities=18% Similarity=0.290 Sum_probs=44.8
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHHhhcCC----CHHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKG----TKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~----~~~~~l~~~F~l~D~d~~G~Is~~El~~~l 123 (328)
++++|+.+|.++ +|.|+.+||..++..+... ..++.+..+|+.+|.|++|.|+.+|+..++
T Consensus 2 l~~~F~~~D~d~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDG-DGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTS-SSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCc-cCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 457788888888 8888888888887766522 234566677888888888888888887653
No 26
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.50 E-value=6.3e-07 Score=75.33 Aligned_cols=96 Identities=20% Similarity=0.206 Sum_probs=78.1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc-----hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc--CC-----
Q 020286 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE--KG----- 93 (328)
Q Consensus 26 ~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~--~~----- 93 (328)
.....+|..+|++ ++|.|+.++|...+... ..-+...|+.+|.++ +|.|+.+|++.++..+. .+
T Consensus 64 ~y~~~vF~~fD~~---~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dg-dG~It~~Eml~iv~~i~~m~~~~~~~ 139 (193)
T KOG0044|consen 64 KYAELVFRTFDKN---KDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDG-DGYITKEEMLKIVQAIYQMTGSKALP 139 (193)
T ss_pred HHHHHHHHHhccc---CCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCC-CceEcHHHHHHHHHHHHHHcccccCC
Confidence 3456777888887 89999999988776542 455677899999999 99999999999876543 11
Q ss_pred ----CHHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 94 ----TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 94 ----~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
+.++....+|+.+|.|+||.||.+|+.....+
T Consensus 140 ~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 140 EDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred cccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 25788999999999999999999999887755
No 27
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.50 E-value=2.7e-07 Score=81.47 Aligned_cols=152 Identities=15% Similarity=0.177 Sum_probs=112.6
Q ss_pred CCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc-hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcC-CCHHH
Q 020286 20 FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEK-GTKDE 97 (328)
Q Consensus 20 fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~-~~~~~ 97 (328)
+...-+.+=...+...+.. ++++.|.-.+|...++.+ ....+.+|..||+++ +|.+||.|.+..++.+|+ ....+
T Consensus 220 L~~~gl~k~ld~y~~var~--~kg~~igi~efa~~l~vpvsd~l~~~f~LFde~~-tg~~D~re~v~~lavlc~p~~t~~ 296 (412)
T KOG4666|consen 220 LPLVGLIKKLDGYVYVARE--AKGPDIGIVEFAVNLRVPVSDKLAPTFMLFDEGT-TGNGDYRETVKTLAVLCGPPVTPV 296 (412)
T ss_pred CChHHHHHHHhhHHHHHHh--ccCCCcceeEeeeeeecchhhhhhhhhheecCCC-CCcccHHHHhhhheeeeCCCCcHH
Confidence 4444444333444443332 256788888898888887 677889999999999 999999999999999984 45588
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHH
Q 020286 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (328)
Q Consensus 98 ~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~ 177 (328)
.++.+|++|+.+.||.++..+|.-++...++. ... .+-.++.++ ++. .+++|++++|..+.
T Consensus 297 iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv---------~~l----~v~~lf~~i--~q~----d~~ki~~~~f~~fa 357 (412)
T KOG4666|consen 297 IIQYAFKRFSVAEDGISGEHILSLILQVVLGV---------EVL----RVPVLFPSI--EQK----DDPKIYASNFRKFA 357 (412)
T ss_pred HHHHHHHhcccccccccchHHHHHHHHHhcCc---------cee----eccccchhh--hcc----cCcceeHHHHHHHH
Confidence 99999999999999999999999888876553 111 223334443 222 56899999999999
Q ss_pred HhcchhHHhhcccccC
Q 020286 178 TLIPSARKFLGGLLTP 193 (328)
Q Consensus 178 ~~~p~~~~~l~~~l~~ 193 (328)
...|.+......+|-+
T Consensus 358 ~~~p~~a~~~~~yld~ 373 (412)
T KOG4666|consen 358 ATEPNLALSELGYLDK 373 (412)
T ss_pred HhCchhhhhhhccccc
Confidence 9999887665555543
No 28
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.50 E-value=1.2e-06 Score=77.85 Aligned_cols=131 Identities=15% Similarity=0.226 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc------hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCH
Q 020286 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTK 95 (328)
Q Consensus 22 ~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~ 95 (328)
.+.+.+=.+.|+..|.+ ++|.+++++|..++--. ...++.-..-+|+|+ +|.|+++||+.-+........
T Consensus 159 ~km~~rDe~rFk~AD~d---~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~-DG~I~~eEfigd~~~~~~~~~ 234 (325)
T KOG4223|consen 159 KKMIARDEERFKAADQD---GDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNG-DGKISLEEFIGDLYSHEGNEE 234 (325)
T ss_pred HHHHHHHHHHHhhcccC---CCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCC-CCceeHHHHHhHHhhccCCCC
Confidence 44566678889998887 89999999999986531 334566777789999 999999999997654443211
Q ss_pred -----HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCH
Q 020286 96 -----DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSF 170 (328)
Q Consensus 96 -----~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~ 170 (328)
...-...+.-.|+|+||+++.+|++..|.- .+....+..+.-++.++ |. ++||++|+
T Consensus 235 epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P------------~~~d~A~~EA~hL~~ea-----D~-dkD~kLs~ 296 (325)
T KOG4223|consen 235 EPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILP------------SEQDHAKAEARHLLHEA-----DE-DKDGKLSK 296 (325)
T ss_pred CcccccccHHHHHHHhhcCCCCccCHHHHhcccCC------------CCccHHHHHHHHHhhhh-----cc-CccccccH
Confidence 112235788889999999999999966532 23344456677777664 33 38999999
Q ss_pred HHHH
Q 020286 171 EDFR 174 (328)
Q Consensus 171 ~ef~ 174 (328)
+|..
T Consensus 297 eEIl 300 (325)
T KOG4223|consen 297 EEIL 300 (325)
T ss_pred HHHh
Confidence 9974
No 29
>PTZ00184 calmodulin; Provisional
Probab=98.49 E-value=1.3e-06 Score=70.60 Aligned_cols=94 Identities=13% Similarity=0.202 Sum_probs=77.3
Q ss_pred HHHHHHHHHhhccCCCCCCCCHHHHHhhhcC------chhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHH
Q 020286 27 DLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEE 100 (328)
Q Consensus 27 ~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~ 100 (328)
.+.+.|..++.+ ++|.|+.++|..++.. ....+..+|+.+|.++ +|.|+.++|..++..+.....++.++
T Consensus 48 ~~~~~~~~~d~~---~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~ 123 (149)
T PTZ00184 48 ELQDMINEVDAD---GNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDG-NGFISAAELRHVMTNLGEKLTDEEVD 123 (149)
T ss_pred HHHHHHHhcCcC---CCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCC-CCeEeHHHHHHHHHHHCCCCCHHHHH
Confidence 456667777665 6899999999987652 1346789999999999 99999999999998765555577788
Q ss_pred HHHHHhcCCCCCccCHHHHHHHHH
Q 020286 101 FIYQLLDVNDDGVLGRSDLESVVI 124 (328)
Q Consensus 101 ~~F~l~D~d~~G~Is~~El~~~l~ 124 (328)
.+|..+|.+++|.|+.+|+..++.
T Consensus 124 ~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 124 EMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHhcCCCCCCcCcHHHHHHHHh
Confidence 899999999999999999987763
No 30
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.48 E-value=1.8e-06 Score=70.51 Aligned_cols=105 Identities=14% Similarity=0.210 Sum_probs=85.0
Q ss_pred HHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCC
Q 020286 61 LGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGS 140 (328)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~ 140 (328)
....+|+.+|+++ +|.|+-.++-.++..+.....++.+..+++-+|.+++|.|+.+|+..++....... ...
T Consensus 9 el~~~F~~fD~d~-~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~-------~~~ 80 (151)
T KOG0027|consen 9 ELKEAFQLFDKDG-DGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEK-------TDE 80 (151)
T ss_pred HHHHHHHHHCCCC-CCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccc-------ccc
Confidence 4678999999999 99999999999999999888899999999999999999999999999998754321 001
Q ss_pred CChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 141 NSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 141 ~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
......+.+.|+. |+.+ ++|.||.+|+...+..
T Consensus 81 ~~~~~el~eaF~~--fD~d----~~G~Is~~el~~~l~~ 113 (151)
T KOG0027|consen 81 EASSEELKEAFRV--FDKD----GDGFISASELKKVLTS 113 (151)
T ss_pred cccHHHHHHHHHH--HccC----CCCcCcHHHHHHHHHH
Confidence 1233456666773 4443 8999999999999986
No 31
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.31 E-value=3.2e-06 Score=63.52 Aligned_cols=65 Identities=14% Similarity=0.242 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC---chhHHHHHHHHhccCCCCCceeHHHHHHHHH
Q 020286 20 FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---KGALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 20 fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~---~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (328)
++++|+..+.+.|..+|++ ++|.|+.+++..++.. +...+++++..+|.++ +|.|+|+||+.++.
T Consensus 4 ls~~~~~~l~~~F~~~D~d---~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~-~g~I~~~eF~~~~~ 71 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKN---QDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDN-DGELDKDEFALAMH 71 (96)
T ss_pred CCHHHHHHHHHHHHHhCCC---CCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence 4556666666666666654 4556666666555422 2334445555555544 55555555554443
No 32
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.28 E-value=1.5e-05 Score=67.23 Aligned_cols=130 Identities=13% Similarity=0.189 Sum_probs=99.3
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCchhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHH
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEI 98 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~ 98 (328)
.|+.+-+..+-.+|+. + ++|.|..+||+.++..-. -.+.+|+.+|+|+ +|.|+..|+..++..+.-.-..+.
T Consensus 90 ~Fs~~TcrlmI~mfd~---~---~~G~i~f~EF~~Lw~~i~-~Wr~vF~~~D~D~-SG~I~~sEL~~Al~~~Gy~Lspq~ 161 (221)
T KOG0037|consen 90 PFSIETCRLMISMFDR---D---NSGTIGFKEFKALWKYIN-QWRNVFRTYDRDR-SGTIDSSELRQALTQLGYRLSPQF 161 (221)
T ss_pred CCCHHHHHHHHHHhcC---C---CCCccCHHHHHHHHHHHH-HHHHHHHhcccCC-CCcccHHHHHHHHHHcCcCCCHHH
Confidence 4777777666666655 3 679999999999987543 3678999999999 999999999999999987777889
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHH
Q 020286 99 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCT 178 (328)
Q Consensus 99 l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~ 178 (328)
.+.+++.||..++|.|..+++.+.+..+-.+ . +.+++. |.. . ++.-.|++++|.....
T Consensus 162 ~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~l-----------------t-~~Fr~~--D~~-q-~G~i~~~y~dfl~~t~ 219 (221)
T KOG0037|consen 162 YNLLVRKYDRFGGGRIDFDDFIQCCVVLQRL-----------------T-EAFRRR--DTA-Q-QGSITISYDDFLQMTM 219 (221)
T ss_pred HHHHHHHhccccCCceeHHHHHHHHHHHHHH-----------------H-HHHHHh--ccc-c-ceeEEEeHHHHHHHhh
Confidence 9999999998889999999998877554322 2 224432 222 1 2455689999977653
No 33
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.28 E-value=3.5e-06 Score=62.12 Aligned_cols=65 Identities=12% Similarity=0.132 Sum_probs=51.4
Q ss_pred HHHHHHHHhcC-CCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChH-HHHHHHHHhccccccCcCCCCCCCCHHHHHH
Q 020286 98 IEEFIYQLLDV-NDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQ-DIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (328)
Q Consensus 98 ~l~~~F~l~D~-d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~ 175 (328)
.+..+|..||. +++|+|+.+||+.+++.-++. .... ..+++++..+ |. ++||.|+|+||..
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-----------~ls~~~~v~~mi~~~-----D~-d~DG~I~F~EF~~ 71 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-----------LLKDVEGLEEKMKNL-----DV-NQDSKLSFEEFWE 71 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-----------hccCHHHHHHHHHHh-----CC-CCCCCCcHHHHHH
Confidence 47779999999 999999999999999883332 1222 5688888765 33 3899999999999
Q ss_pred HHHh
Q 020286 176 WCTL 179 (328)
Q Consensus 176 ~~~~ 179 (328)
++..
T Consensus 72 l~~~ 75 (89)
T cd05022 72 LIGE 75 (89)
T ss_pred HHHH
Confidence 8876
No 34
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.20 E-value=1.1e-05 Score=59.43 Aligned_cols=69 Identities=14% Similarity=0.279 Sum_probs=53.9
Q ss_pred HHHHHHHHhc-CCCCC-ccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHH
Q 020286 98 IEEFIYQLLD-VNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (328)
Q Consensus 98 ~l~~~F~l~D-~d~~G-~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~ 175 (328)
.++.+|+.|| .+++| .|+.+||+.+++.-+... .+....++.++++++.+ + . +++|.|+|++|..
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~-------lg~~~~~~~v~~~i~~~--D---~-n~dG~v~f~eF~~ 75 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHF-------LEEIKEQEVVDKVMETL--D---S-DGDGECDFQEFMA 75 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHH-------hcCCCCHHHHHHHHHHh--C---C-CCCCcCcHHHHHH
Confidence 4778999998 79999 599999999998744332 13445667799988876 3 3 3899999999998
Q ss_pred HHHh
Q 020286 176 WCTL 179 (328)
Q Consensus 176 ~~~~ 179 (328)
++..
T Consensus 76 li~~ 79 (88)
T cd05027 76 FVAM 79 (88)
T ss_pred HHHH
Confidence 8865
No 35
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.18 E-value=1.3e-05 Score=59.82 Aligned_cols=69 Identities=16% Similarity=0.262 Sum_probs=52.0
Q ss_pred HHHHHHHHhc-CCCCC-ccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHH
Q 020286 98 IEEFIYQLLD-VNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (328)
Q Consensus 98 ~l~~~F~l~D-~d~~G-~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~ 175 (328)
.+..+|..|| .|++| .|+.+||+.++.......+ +....+..++++++.+ + . +++|.|+++||..
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~-------~~~~~~~~v~~i~~el--D---~-n~dG~Idf~EF~~ 77 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFL-------SSQKDPMLVDKIMNDL--D---S-NKDNEVDFNEFVV 77 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhc-------ccccCHHHHHHHHHHh--C---C-CCCCCCCHHHHHH
Confidence 4666899999 78998 5999999999977443211 1233556788888876 3 3 3899999999999
Q ss_pred HHHh
Q 020286 176 WCTL 179 (328)
Q Consensus 176 ~~~~ 179 (328)
++..
T Consensus 78 l~~~ 81 (93)
T cd05026 78 LVAA 81 (93)
T ss_pred HHHH
Confidence 8876
No 36
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.16 E-value=7.4e-06 Score=60.38 Aligned_cols=64 Identities=20% Similarity=0.223 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHhhhcC--c----h-hHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 23 HELEDLKSLFKSLAA-QSQSNGRYISPSIFQAYFGL--K----G-ALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 23 ~ei~~l~~~F~~l~~-~~~~~~g~i~~~~f~~~~~~--~----~-~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
+-+..|.+.|..+|+ + ++|.|+.++|+.++.. + . ..++.+++.+|.++ +|.|+|+||+.++..+
T Consensus 5 ~ai~~l~~~F~~fd~~~---~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~-DG~I~F~EF~~l~~~l 76 (89)
T cd05022 5 KAIETLVSNFHKASVKG---GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQ-DSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHhCCC---CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCC-CCCCcHHHHHHHHHHH
Confidence 345666777777766 4 5667777777665543 1 2 45666666666666 7777777776665433
No 37
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.15 E-value=1.1e-05 Score=67.77 Aligned_cols=103 Identities=12% Similarity=0.142 Sum_probs=78.5
Q ss_pred CCCHHHHHHH---------HHHHHHHhhccCCCCCC-CCHHHHHhhhcCc------hhHHHHHHHHhccCCCCCceeHHH
Q 020286 19 SFAQHELEDL---------KSLFKSLAAQSQSNGRY-ISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFED 82 (328)
Q Consensus 19 ~fs~~ei~~l---------~~~F~~l~~~~~~~~g~-i~~~~f~~~~~~~------~~~~~~lf~~~d~~~~~g~I~f~e 82 (328)
.++.+|...+ .+.++.++.. ++|. |+.++|...+..- ..-++-.|+.+|.++ +|.|+.+|
T Consensus 50 ~lt~eef~~i~~~~~Np~~~rI~~~f~~~---~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~-~G~I~ree 125 (187)
T KOG0034|consen 50 YLTKEEFLSIPELALNPLADRIIDRFDTD---GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDG-DGFISREE 125 (187)
T ss_pred ccCHHHHHHHHHHhcCcHHHHHHHHHhcc---CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCC-CCcCcHHH
Confidence 4566666544 3344444443 4555 9999999887662 225677899999999 99999999
Q ss_pred HHHHHHhhcCC-CH------HHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 83 LVVAKATYEKG-TK------DEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 83 F~~~l~~~~~~-~~------~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
+..++..+... .. ++.+...|..+|.|+||+|+.+|+..++..
T Consensus 126 l~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 126 LKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 99999877642 22 457788999999999999999999998865
No 38
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.10 E-value=1.4e-05 Score=53.69 Aligned_cols=61 Identities=16% Similarity=0.279 Sum_probs=51.2
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l 123 (328)
+.++|+.+|.++ +|.|++++|..++..+.....++.+..+|+.+|.+++|.|+.+|+..++
T Consensus 2 ~~~~f~~~d~~~-~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDG-DGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCC-CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 457888889888 8999999999998877766667778889999999999999999987654
No 39
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.08 E-value=1.3e-05 Score=59.70 Aligned_cols=64 Identities=17% Similarity=0.361 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHh-hccCCCCC-CCCHHHHHhhhcC----------chhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 23 HELEDLKSLFKSLA-AQSQSNGR-YISPSIFQAYFGL----------KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 23 ~ei~~l~~~F~~l~-~~~~~~~g-~i~~~~f~~~~~~----------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
.-+..+.+.|..+| ++ ++| .|+.++|+.++.. ....++.+++.+|.++ +|.|+|+||+.++..+
T Consensus 7 ~a~~~~~~~F~~~dd~d---gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~-dG~Idf~EF~~l~~~l 82 (93)
T cd05026 7 GAMDTLIRIFHNYSGKE---GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNK-DNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHccC---CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHH
Confidence 44677888888887 33 455 4888888877632 1335777888888877 8888888887776544
No 40
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.06 E-value=3.5e-05 Score=57.35 Aligned_cols=71 Identities=14% Similarity=0.263 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhc-CCCCCc-cCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHH
Q 020286 96 DEIEEFIYQLLD-VNDDGV-LGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 173 (328)
Q Consensus 96 ~~~l~~~F~l~D-~d~~G~-Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef 173 (328)
.+.++.+|.+|| .+++|+ |+.+||+.+++..++..+ +...++..++++++.+ +. +++|.|++++|
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~-------~~~~s~~~v~~i~~~~--D~----d~~G~I~f~eF 74 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFL-------DAQKDADAVDKIMKEL--DE----NGDGEVDFQEF 74 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHc-------cCCCCHHHHHHHHHHH--CC----CCCCcCcHHHH
Confidence 456888999997 999995 999999999976333211 1233566788888865 33 37899999999
Q ss_pred HHHHHh
Q 020286 174 RSWCTL 179 (328)
Q Consensus 174 ~~~~~~ 179 (328)
..++..
T Consensus 75 ~~l~~~ 80 (92)
T cd05025 75 VVLVAA 80 (92)
T ss_pred HHHHHH
Confidence 988875
No 41
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.05 E-value=1.9e-05 Score=58.15 Aligned_cols=65 Identities=11% Similarity=0.272 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHhh--ccCCCCCCCCHHHHHhhhcC----------chhHHHHHHHHhccCCCCCceeHHHHHHHHHh
Q 020286 22 QHELEDLKSLFKSLAA--QSQSNGRYISPSIFQAYFGL----------KGALGERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (328)
Q Consensus 22 ~~ei~~l~~~F~~l~~--~~~~~~g~i~~~~f~~~~~~----------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (328)
++++..+++.|..+|+ + ++|.|+.++|..++.. ....+.+++..+|.++ +|.|+|++|+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~---~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~-~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEG---DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNK-DGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccC---CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCC-CCcCcHHHHHHHHHH
Confidence 4677778888888877 5 6778888888776532 1355777777777777 777888888776654
Q ss_pred h
Q 020286 90 Y 90 (328)
Q Consensus 90 ~ 90 (328)
.
T Consensus 80 ~ 80 (88)
T cd00213 80 L 80 (88)
T ss_pred H
Confidence 3
No 42
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.02 E-value=3.4e-05 Score=56.87 Aligned_cols=67 Identities=10% Similarity=0.281 Sum_probs=52.2
Q ss_pred HHHHHHHHhcC-CC-CCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHH
Q 020286 98 IEEFIYQLLDV-ND-DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (328)
Q Consensus 98 ~l~~~F~l~D~-d~-~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~ 175 (328)
.+-.+|..||. ++ +|+|+.+||+.++..... .+...+++.++++++.+ |. +++|.|+|+||..
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~---------lg~k~t~~ev~~m~~~~-----D~-d~dG~Idf~EFv~ 75 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELT---------IGSKLQDAEIAKLMEDL-----DR-NKDQEVNFQEYVT 75 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHh---------cCCCCCHHHHHHHHHHh-----cC-CCCCCCcHHHHHH
Confidence 35568999997 66 899999999999965222 24556778899988875 33 3889999999998
Q ss_pred HHHh
Q 020286 176 WCTL 179 (328)
Q Consensus 176 ~~~~ 179 (328)
++.+
T Consensus 76 lm~~ 79 (88)
T cd05029 76 FLGA 79 (88)
T ss_pred HHHH
Confidence 8876
No 43
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.01 E-value=4.3e-05 Score=57.07 Aligned_cols=72 Identities=15% Similarity=0.214 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhcC-CC-CCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHH
Q 020286 96 DEIEEFIYQLLDV-ND-DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 173 (328)
Q Consensus 96 ~~~l~~~F~l~D~-d~-~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef 173 (328)
...+..+|..||. |+ +|.|+.+||+.+++..+... .+...++..++.++..+ +. +++|.|++++|
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~-------lg~~~s~~ei~~~~~~~--D~----~~dg~I~f~eF 73 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEF-------LKNQKDPMAVDKIMKDL--DQ----NRDGKVNFEEF 73 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHH-------hhccccHHHHHHHHHHh--CC----CCCCcCcHHHH
Confidence 3468889999997 87 69999999999998643321 12344566788888865 32 38899999999
Q ss_pred HHHHHhc
Q 020286 174 RSWCTLI 180 (328)
Q Consensus 174 ~~~~~~~ 180 (328)
...+...
T Consensus 74 ~~l~~~~ 80 (94)
T cd05031 74 VSLVAGL 80 (94)
T ss_pred HHHHHHH
Confidence 9888753
No 44
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.00 E-value=6.8e-05 Score=69.18 Aligned_cols=132 Identities=13% Similarity=0.176 Sum_probs=90.3
Q ss_pred HHHHHHHHHhhccCCCCCCCCHHHHHhhhcC------c-hhHHHHHHHHhccCCCCCceeHHHHHHHHHhh--cCC----
Q 020286 27 DLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------K-GALGERMFNLVTQKRNDHKLTFEDLVVAKATY--EKG---- 93 (328)
Q Consensus 27 ~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~------~-~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~--~~~---- 93 (328)
.|.+.|+.+|.. ..|.|+...+..++.. | ..+..++-.. .. +|.|.|.+-+..+..- ...
T Consensus 465 dL~~eF~~~D~~---ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~---s~-d~~v~Y~~~~~~l~~e~~~~ea~~s 537 (631)
T KOG0377|consen 465 DLEDEFRKYDPK---KSGKLSISHWAKCMENITGLNLPWRLLRPKLANG---SD-DGKVEYKSTLDNLDTEVILEEAGSS 537 (631)
T ss_pred HHHHHHHhcChh---hcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCC---Cc-CcceehHhHHHHhhhhhHHHHHHhH
Confidence 567788888876 7899999999876443 2 2223333222 22 6677777766644311 100
Q ss_pred ------CHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCC
Q 020286 94 ------TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKS 167 (328)
Q Consensus 94 ------~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~ 167 (328)
.....++.+|..+|.|++|.|+.+|++..++.+..- .......+.+.++...| |. ++||.
T Consensus 538 lvetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh--------~~~~i~~~~i~~la~~m-----D~-NkDG~ 603 (631)
T KOG0377|consen 538 LVETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSH--------MNGAISDDEILELARSM-----DL-NKDGK 603 (631)
T ss_pred HHHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhh--------cCCCcCHHHHHHHHHhh-----cc-CCCCc
Confidence 013457889999999999999999999998875443 23455677888888876 22 38999
Q ss_pred CCHHHHHHHHHh
Q 020286 168 MSFEDFRSWCTL 179 (328)
Q Consensus 168 Is~~ef~~~~~~ 179 (328)
|++.||.....-
T Consensus 604 IDlNEfLeAFrl 615 (631)
T KOG0377|consen 604 IDLNEFLEAFRL 615 (631)
T ss_pred ccHHHHHHHHhh
Confidence 999999877654
No 45
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.99 E-value=2.4e-05 Score=58.24 Aligned_cols=60 Identities=15% Similarity=0.329 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHh-hccCCCCC-CCCHHHHHhhhcC----------chhHHHHHHHHhccCCCCCceeHHHHHHHHH
Q 020286 25 LEDLKSLFKSLA-AQSQSNGR-YISPSIFQAYFGL----------KGALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 25 i~~l~~~F~~l~-~~~~~~~g-~i~~~~f~~~~~~----------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (328)
+..+.+.|..+| .+ ++| .|+.++|..++.. ....++.+++.+|.++ +|.|+|++|+.++.
T Consensus 8 ~~~l~~~F~~fDd~d---g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~-~G~I~f~eF~~l~~ 79 (92)
T cd05025 8 METLINVFHAHSGKE---GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENG-DGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHHhccc---CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCC-CCcCcHHHHHHHHH
Confidence 345555555554 44 455 3666665555431 1233555555555555 55555555555444
No 46
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.98 E-value=2.5e-05 Score=51.79 Aligned_cols=51 Identities=20% Similarity=0.274 Sum_probs=42.5
Q ss_pred CCceeHHHHHHHHHhhcCC-CHHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 75 DHKLTFEDLVVAKATYEKG-TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~-~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
+|.|+.++|..++..+... ..++.++.+|..+|.+++|.|+.+|+..++..
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 6899999999999666544 45666999999999999999999999988753
No 47
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.95 E-value=3e-05 Score=57.28 Aligned_cols=66 Identities=17% Similarity=0.331 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHhhccCCCC-CCCCHHHHHhhhcCc----------hhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 22 QHELEDLKSLFKSLAAQSQSNG-RYISPSIFQAYFGLK----------GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 22 ~~ei~~l~~~F~~l~~~~~~~~-g~i~~~~f~~~~~~~----------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
++.+..|...|..++... ++ +.|++++|+.+++.. +..++.+++.+|.++ +|.|+|+||+.++..+
T Consensus 5 e~~i~~l~~~F~~y~~~d--g~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~-DG~I~f~EF~~l~~~l 81 (89)
T cd05023 5 ERCIESLIAVFQKYAGKD--GDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNS-DGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHHhccC--CCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCC-CCcCcHHHHHHHHHHH
Confidence 455788888898854321 33 489999998876542 345778888888887 8888888888776544
No 48
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.94 E-value=7.5e-05 Score=54.97 Aligned_cols=70 Identities=13% Similarity=0.207 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcC--CCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHH
Q 020286 97 EIEEFIYQLLDV--NDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 174 (328)
Q Consensus 97 ~~l~~~F~l~D~--d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~ 174 (328)
+.++.+|..||. +++|.|+.+|+..+++..++.. .+....+..++.++... +. +++|.|++++|.
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~-------~~~~~~~~ei~~i~~~~--d~----~~~g~I~f~eF~ 74 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNF-------LKNQKDPEAVDKIMKDL--DV----NKDGKVDFQEFL 74 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhh-------ccCCCCHHHHHHHHHHh--cc----CCCCcCcHHHHH
Confidence 457889999999 8999999999999997633321 11223566788888864 32 378999999999
Q ss_pred HHHHh
Q 020286 175 SWCTL 179 (328)
Q Consensus 175 ~~~~~ 179 (328)
.++..
T Consensus 75 ~~~~~ 79 (88)
T cd00213 75 VLIGK 79 (88)
T ss_pred HHHHH
Confidence 98875
No 49
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.94 E-value=3.3e-05 Score=53.44 Aligned_cols=60 Identities=13% Similarity=0.222 Sum_probs=35.4
Q ss_pred HHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020286 64 RMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 126 (328)
Q Consensus 64 ~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~ 126 (328)
++|+.+|.++ +|.|+.+|+..++.... ..++.++.+|+.+|.+++|.|+.+|+..++..+
T Consensus 3 ~~F~~~D~~~-~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 3 QIFRSLDPDG-DGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred HHHHHhCCCC-CCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4566666666 66666666666654432 234445666666666666666666666655443
No 50
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=97.93 E-value=6.6e-05 Score=55.29 Aligned_cols=60 Identities=10% Similarity=0.231 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHh-hccCCCCC-CCCHHHHHhhhcC-----c-----hhHHHHHHHHhccCCCCCceeHHHHHHHHH
Q 020286 25 LEDLKSLFKSLA-AQSQSNGR-YISPSIFQAYFGL-----K-----GALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 25 i~~l~~~F~~l~-~~~~~~~g-~i~~~~f~~~~~~-----~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (328)
+..|.++|..+| ++ ++| .|+.++|+.++.. . ...++++++.+|.++ +|.|+|++|+.++.
T Consensus 7 ~~~l~~aF~~fD~~d---gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~-dG~v~f~eF~~li~ 78 (88)
T cd05027 7 MVALIDVFHQYSGRE---GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDG-DGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHHhcccC---CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCC-CCcCcHHHHHHHHH
Confidence 444555555554 23 344 3555555544332 0 122444454445444 45555555544443
No 51
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.91 E-value=6.5e-05 Score=51.93 Aligned_cols=58 Identities=22% Similarity=0.405 Sum_probs=50.0
Q ss_pred HHHHHHHhhccCCCCCCCCHHHHHhhh---cCchhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 29 KSLFKSLAAQSQSNGRYISPSIFQAYF---GLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 29 ~~~F~~l~~~~~~~~g~i~~~~f~~~~---~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
++.|..+|++ ++|.|+.+++..++ +.+...++++++.++.++ +|.|+|+||+.++..+
T Consensus 2 ~~~F~~~D~~---~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~-~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPD---GDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDK-DGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCC---CCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCC-CCcCCHHHHHHHHHHH
Confidence 5689999887 78999999999876 445677899999999998 9999999999988654
No 52
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.90 E-value=1.8e-05 Score=72.91 Aligned_cols=147 Identities=17% Similarity=0.265 Sum_probs=88.0
Q ss_pred HHHHHHHHHhhccCCCCC--CCCHHHHHhh--hcCc--hhHHHHHHHHhccCC------------------CCCceeHHH
Q 020286 27 DLKSLFKSLAAQSQSNGR--YISPSIFQAY--FGLK--GALGERMFNLVTQKR------------------NDHKLTFED 82 (328)
Q Consensus 27 ~l~~~F~~l~~~~~~~~g--~i~~~~f~~~--~~~~--~~~~~~lf~~~d~~~------------------~~g~I~f~e 82 (328)
++.+.|..+--...++.+ .+++++|..- ++.+ ..++.+-++.++... .+|.|+|.|
T Consensus 141 kiFryFAtvk~~~~~~~~evyMTP~DFlrSi~p~~~qpe~~gld~~k~~~~~~~~~~~~~~~~~siF~~lg~~GLIsfSd 220 (489)
T KOG2643|consen 141 KIFRYFATVKYKNDSGKGEVYMTPEDFLRSITPGAKQPERLGLDKLKDIDEKLKKELPKFSDGDSIFYKLGESGLISFSD 220 (489)
T ss_pred HHHHHhheeeeeccCCCceEEeCHHHHHHhcCCCCCCchhhhhHHHhhhchhccccCccCCCCCeeEEEcCCCCeeeHHH
Confidence 445555554321112233 7889999864 3333 233333334332111 178999999
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHH-hcc--hhcccCCCChHHHHHHHHHhcccccc
Q 020286 83 LVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEII-FSM--EISERGSNSHQDIVDVFLNAATFSKN 159 (328)
Q Consensus 83 F~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~-~~~--~~~~~~~~~~~~~i~~l~~~~~~~~~ 159 (328)
|+-.+..++ .++...+.+|++||.|+||.|+.+|+..+...+..-. +.. ++.-.......-.++.-+....|-..
T Consensus 221 YiFLlTlLS--~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~r 298 (489)
T KOG2643|consen 221 YIFLLTLLS--IPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKR 298 (489)
T ss_pred HHHHHHHHc--cCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccC
Confidence 999888776 3456688999999999999999999988775543221 110 11111112222233433444455433
Q ss_pred CcCCCCCCCCHHHHHHHHHh
Q 020286 160 GERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 160 ~~~~~dg~Is~~ef~~~~~~ 179 (328)
+++++++++|..+...
T Consensus 299 ----g~~kLs~deF~~F~e~ 314 (489)
T KOG2643|consen 299 ----GNGKLSIDEFLKFQEN 314 (489)
T ss_pred ----CCccccHHHHHHHHHH
Confidence 7889999999998876
No 53
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.89 E-value=7e-05 Score=55.18 Aligned_cols=67 Identities=12% Similarity=0.253 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhc------Cc--hhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG------LK--GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 22 ~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~------~~--~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
++.+..|-..|.+++.+. .++|.|+.++|..++. .+ ...++++++.+|.++ +|.|+|+||+.++..+
T Consensus 6 e~~~~~~i~~F~~y~~~~-~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~-dG~Idf~EFv~lm~~l 80 (88)
T cd05029 6 DQAIGLLVAIFHKYSGRE-GDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNK-DQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHccC-CCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCC-CCCCcHHHHHHHHHHH
Confidence 445677788888887631 1367888888887763 22 456778888888887 8888888887766543
No 54
>PLN02964 phosphatidylserine decarboxylase
Probab=97.88 E-value=9.5e-05 Score=73.18 Aligned_cols=112 Identities=17% Similarity=0.276 Sum_probs=77.4
Q ss_pred CCCHHHHHhhhcC--c------hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc--CCCHHH--HHHHHHHHhcCCCCC
Q 020286 45 YISPSIFQAYFGL--K------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE--KGTKDE--IEEFIYQLLDVNDDG 112 (328)
Q Consensus 45 ~i~~~~f~~~~~~--~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~--~~~~~~--~l~~~F~l~D~d~~G 112 (328)
.++++++...... . .....+.|+.+|.++ +|.+ +-.++..+. ..+.++ .++.+|+.+|.|++|
T Consensus 120 ~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dg-dG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG 194 (644)
T PLN02964 120 RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSS-SNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDG 194 (644)
T ss_pred CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCC-CCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCC
Confidence 4555555544333 1 223567799999999 9987 333333333 222233 288999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 113 VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 113 ~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
.|+.+|+..++..+ +....++.+.++|+.. |.+ ++|.|+++||...+..
T Consensus 195 ~IdfdEFl~lL~~l------------g~~~seEEL~eaFk~f--DkD----gdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 195 QLSFSEFSDLIKAF------------GNLVAANKKEELFKAA--DLN----GDGVVTIDELAALLAL 243 (644)
T ss_pred eEcHHHHHHHHHHh------------ccCCCHHHHHHHHHHh--CCC----CCCcCCHHHHHHHHHh
Confidence 99999999999752 2334566788888853 433 8899999999988776
No 55
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.86 E-value=0.00011 Score=55.10 Aligned_cols=67 Identities=16% Similarity=0.262 Sum_probs=57.7
Q ss_pred HHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHH
Q 020286 61 LGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEII 130 (328)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~ 130 (328)
...++|+.+|.++ +|.|+.+++..++... +..++.++.+|+.+|.+++|.|+.+|+..++..+....
T Consensus 11 ~l~~~F~~~D~d~-~G~Is~~el~~~l~~~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 77 (96)
T smart00027 11 KYEQIFRSLDKNQ-DGTVTGAQAKPILLKS--GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKL 77 (96)
T ss_pred HHHHHHHHhCCCC-CCeEeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHH
Confidence 4568999999999 9999999999998764 34466788999999999999999999999998876654
No 56
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.86 E-value=6.4e-05 Score=58.24 Aligned_cols=59 Identities=17% Similarity=0.240 Sum_probs=42.1
Q ss_pred hHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020286 60 ALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (328)
Q Consensus 60 ~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l 123 (328)
.-+...|..+|.++ +|.|+.+|+..+. ....+..+..+|+.+|.|+||.||.+|+...+
T Consensus 48 ~~l~w~F~~lD~d~-DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 48 DPVGWMFNQLDGNY-DGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHCCCC-CCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 34667777777777 7788888777654 22345666777778888888888888877766
No 57
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.86 E-value=0.00013 Score=53.85 Aligned_cols=70 Identities=14% Similarity=0.213 Sum_probs=52.0
Q ss_pred HHHHHHHHH-hcCCCCC-ccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHH
Q 020286 97 EIEEFIYQL-LDVNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 174 (328)
Q Consensus 97 ~~l~~~F~l-~D~d~~G-~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~ 174 (328)
..+..+|.. +|.+++| .|+.+||+.++...+.... +....+..+++++..+ + . ++||.|+++||.
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~-------~~~~~~~~~~~ll~~~--D---~-d~DG~I~f~EF~ 75 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFT-------KNQKDPGVLDRMMKKL--D---L-NSDGQLDFQEFL 75 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhh-------cCCCCHHHHHHHHHHc--C---C-CCCCcCcHHHHH
Confidence 356778988 6787876 9999999999988544322 1233456788888865 3 3 389999999999
Q ss_pred HHHHh
Q 020286 175 SWCTL 179 (328)
Q Consensus 175 ~~~~~ 179 (328)
.++..
T Consensus 76 ~l~~~ 80 (89)
T cd05023 76 NLIGG 80 (89)
T ss_pred HHHHH
Confidence 98876
No 58
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.84 E-value=6.3e-05 Score=56.19 Aligned_cols=59 Identities=20% Similarity=0.291 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhh-ccCCC-CCCCCHHHHHhhhcC----------chhHHHHHHHHhccCCCCCceeHHHHHHHH
Q 020286 25 LEDLKSLFKSLAA-QSQSN-GRYISPSIFQAYFGL----------KGALGERMFNLVTQKRNDHKLTFEDLVVAK 87 (328)
Q Consensus 25 i~~l~~~F~~l~~-~~~~~-~g~i~~~~f~~~~~~----------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l 87 (328)
+..+.+.|..+|. + + +|.|+.+++..++.. ....++.+++.+|.++ +|.|+|++|+.++
T Consensus 7 ~~~l~~~F~~~D~~d---g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~-dg~I~f~eF~~l~ 77 (94)
T cd05031 7 MESLILTFHRYAGKD---GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNR-DGKVNFEEFVSLV 77 (94)
T ss_pred HHHHHHHHHHHhccC---CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCC-CCcCcHHHHHHHH
Confidence 4455555555554 3 3 355666665554331 1234555555555555 5555555555444
No 59
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.84 E-value=0.00019 Score=64.03 Aligned_cols=137 Identities=13% Similarity=0.176 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc-----hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc------C
Q 020286 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE------K 92 (328)
Q Consensus 24 ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~------~ 92 (328)
...+|.+.+.++|.+ ++|.|+..++..-+... ..-+.+-+...|++. +|.|+|+++........ .
T Consensus 75 ~~~rl~~l~~~iD~~---~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~-Dg~i~~eey~~~~~~~~~~~~~~~ 150 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSD---SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNK-DGFITWEEYLPQTYGRVDLPDEFP 150 (325)
T ss_pred hHHHHHHHHhhhcCC---CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cceeeHHHhhhhhhhcccCccccc
Confidence 456889999999876 78999999998764432 334567778889998 99999999999776431 0
Q ss_pred C---CH-H----HHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCC
Q 020286 93 G---TK-D----EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSS 164 (328)
Q Consensus 93 ~---~~-~----~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~ 164 (328)
. .. . .+-+.-|+.-|.|++|.+|++|+..++.-- ..+....-.+.+-+..+ |. ++
T Consensus 151 d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPE-----------e~p~M~~iVi~Etl~d~-----Dk-n~ 213 (325)
T KOG4223|consen 151 DEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPE-----------EHPHMKDIVIAETLEDI-----DK-NG 213 (325)
T ss_pred cchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChh-----------hcchHHHHHHHHHHhhc-----cc-CC
Confidence 0 00 1 122346889999999999999999887431 11122222344434433 44 39
Q ss_pred CCCCCHHHHHHHHHhcc
Q 020286 165 NKSMSFEDFRSWCTLIP 181 (328)
Q Consensus 165 dg~Is~~ef~~~~~~~p 181 (328)
||.|+++||+.=+...+
T Consensus 214 DG~I~~eEfigd~~~~~ 230 (325)
T KOG4223|consen 214 DGKISLEEFIGDLYSHE 230 (325)
T ss_pred CCceeHHHHHhHHhhcc
Confidence 99999999987776644
No 60
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.82 E-value=1.8e-05 Score=45.31 Aligned_cols=27 Identities=11% Similarity=0.262 Sum_probs=19.0
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 99 EEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 99 l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
++.+|+.||.|++|+|+.+|+..+++.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 456777777777777777777776654
No 61
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.80 E-value=9.7e-05 Score=49.47 Aligned_cols=61 Identities=18% Similarity=0.442 Sum_probs=48.7
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHH
Q 020286 99 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (328)
Q Consensus 99 l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~ 177 (328)
+..+|..+|.+++|.|+.+|+..++... +.......+..++... +. +++|.|++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~------------~~~~~~~~~~~~~~~~--~~----~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSL------------GEGLSEEEIDEMIREV--DK----DGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh------------CCCCCHHHHHHHHHHh--CC----CCCCeEeHHHHHHHh
Confidence 5678999999999999999999998773 3455667777778764 32 378999999998875
No 62
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.76 E-value=0.00013 Score=67.09 Aligned_cols=96 Identities=17% Similarity=0.222 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCchhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHH
Q 020286 25 LEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQ 104 (328)
Q Consensus 25 i~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~ 104 (328)
.+.....|...|.+ .+|.++.++|..++...+...-++|+.+|.++ +|.|+..|.-..+..+.-.-.++++..+|+
T Consensus 50 ~~~~~~l~~~~d~~---~dg~vDy~eF~~Y~~~~E~~l~~~F~~iD~~h-dG~i~~~Ei~~~l~~~gi~l~de~~~k~~e 125 (463)
T KOG0036|consen 50 YEAAKMLFSAMDAN---RDGRVDYSEFKRYLDNKELELYRIFQSIDLEH-DGKIDPNEIWRYLKDLGIQLSDEKAAKFFE 125 (463)
T ss_pred hHHHHHHHHhcccC---cCCcccHHHHHHHHHHhHHHHHHHHhhhcccc-CCccCHHHHHHHHHHhCCccCHHHHHHHHH
Confidence 34566777888877 78999999999999988888889999999999 999999999999988876556777888999
Q ss_pred HhcCCCCCccCHHHHHHHHH
Q 020286 105 LLDVNDDGVLGRSDLESVVI 124 (328)
Q Consensus 105 l~D~d~~G~Is~~El~~~l~ 124 (328)
..|+++++.|+.+|.++.+.
T Consensus 126 ~~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 126 HMDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred HhccCCCeeeccHHHHhhhh
Confidence 99999999999999988663
No 63
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=97.72 E-value=0.00032 Score=56.29 Aligned_cols=93 Identities=13% Similarity=0.147 Sum_probs=76.2
Q ss_pred HHHHHHHhhccCCCCCCCCHHHHHhhhc----C--chhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHH
Q 020286 29 KSLFKSLAAQSQSNGRYISPSIFQAYFG----L--KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFI 102 (328)
Q Consensus 29 ~~~F~~l~~~~~~~~g~i~~~~f~~~~~----~--~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~ 102 (328)
.++-...++. +.|.|+.++|...+. . +..-+.+.|+.+|-++ +|.|++.+|..++-.+...-.++.++..
T Consensus 72 ~kll~d~dk~---~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~-~Gkis~~~lkrvakeLgenltD~El~eM 147 (172)
T KOG0028|consen 72 LKLLADVDKE---GSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDK-TGKISQRNLKRVAKELGENLTDEELMEM 147 (172)
T ss_pred HHHHHhhhhc---cCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccC-CCCcCHHHHHHHHHHhCccccHHHHHHH
Confidence 3344445554 679999999997633 3 2567889999999999 9999999999999888876667788889
Q ss_pred HHHhcCCCCCccCHHHHHHHHHH
Q 020286 103 YQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 103 F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
.+-.|.+++|-|+.+|+..+++.
T Consensus 148 IeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 148 IEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHhcccccccccHHHHHHHHhc
Confidence 99999999999999999887753
No 64
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.72 E-value=0.00014 Score=56.41 Aligned_cols=65 Identities=9% Similarity=0.085 Sum_probs=57.1
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhh-cCchhHHHHHHHHhccCCCCCceeHHHHHHHH
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYF-GLKGALGERMFNLVTQKRNDHKLTFEDLVVAK 87 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~-~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l 87 (328)
...+.....+.-.|..+|.+ ++|.|+.+++..+. ......+.++|+.+|.++ +|.||++||..++
T Consensus 41 ~~~~~~~~~l~w~F~~lD~d---~DG~Ls~~EL~~~~l~~~e~~~~~f~~~~D~n~-Dg~IS~~Ef~~cl 106 (116)
T cd00252 41 SLYPMCKDPVGWMFNQLDGN---YDGKLSHHELAPIRLDPNEHCIKPFFESCDLDK-DGSISLDEWCYCF 106 (116)
T ss_pred hhhHHHHHHHHHHHHHHCCC---CCCcCCHHHHHHHHccchHHHHHHHHHHHCCCC-CCCCCHHHHHHHH
Confidence 34677889999999999998 89999999999875 323678899999999999 9999999999987
No 65
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.70 E-value=0.00024 Score=52.16 Aligned_cols=64 Identities=17% Similarity=0.298 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC--------c--hhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL--------K--GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 22 ~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~--------~--~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
+.-+.-|-..|.+++. +.+.+++.+|+.++.. . +..++++++.+|.|+ ||.|+|.||+..+..+
T Consensus 4 E~ai~~lI~~FhkYaG----~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~-Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 4 EHSMEKMMLTFHKFAG----EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCR-DGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHHHHcC----CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCC-CCcCcHHHHHHHHHHH
Confidence 3457788899999985 4679999999987532 1 456899999999999 9999999999987654
No 66
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.68 E-value=0.00022 Score=52.54 Aligned_cols=67 Identities=15% Similarity=0.309 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC------c----hhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------K----GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 22 ~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~------~----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
++-+..+.+.|..++... ..+|.|+.++|..++.. + ...++.+|..+|.++ +|.|+|++|+.++..+
T Consensus 4 e~~i~~~~~~f~~y~~~~-~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~-dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 4 EKAIETIINVFHQYSVRK-GHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQ-DGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHHHhccC-CCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCC-CCcCcHHHHHHHHHHH
Confidence 345778888888887641 13578888888887752 1 345777888888777 7888888887776544
No 67
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.50 E-value=0.0011 Score=61.37 Aligned_cols=127 Identities=16% Similarity=0.348 Sum_probs=86.8
Q ss_pred HHHHHHHhhccCCCCCCCCHHHHHhhhcCc--------------------h-hHHHH-HHHHhccCCCCCceeHHHHHHH
Q 020286 29 KSLFKSLAAQSQSNGRYISPSIFQAYFGLK--------------------G-ALGER-MFNLVTQKRNDHKLTFEDLVVA 86 (328)
Q Consensus 29 ~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~--------------------~-~~~~~-lf~~~d~~~~~g~I~f~eF~~~ 86 (328)
.-+|+.+|.+ +||.|+++||..+..+. . ..-.. +--.|..++ ++++++++|+.+
T Consensus 236 ~IAFKMFD~d---gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg-~~kLs~deF~~F 311 (489)
T KOG2643|consen 236 RIAFKMFDLD---GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRG-NGKLSIDEFLKF 311 (489)
T ss_pred eeeeeeeecC---CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCC-CccccHHHHHHH
Confidence 4467777887 89999999998764220 0 01112 223456777 999999999999
Q ss_pred HHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCC
Q 020286 87 KATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNK 166 (328)
Q Consensus 87 l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg 166 (328)
+..+ +++.++.=|.-+|...+|.|+..++..++-..-.. ....-..+..++-.+ +.+ .+.
T Consensus 312 ~e~L----q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~---------n~~~k~~~lkrvk~k--f~~-----~~~ 371 (489)
T KOG2643|consen 312 QENL----QEEILELEFERFDKGDSGAISEVDFAELLLAYAGV---------NSKKKHKYLKRVKEK--FKD-----DGK 371 (489)
T ss_pred HHHH----HHHHHHHHHHHhCcccccccCHHHHHHHHHHHccc---------chHhHHHHHHHHHHh--ccC-----CCC
Confidence 9866 58889999999999999999999999988663221 111112233443332 211 245
Q ss_pred CCCHHHHHHHHHh
Q 020286 167 SMSFEDFRSWCTL 179 (328)
Q Consensus 167 ~Is~~ef~~~~~~ 179 (328)
.||++||.+++.-
T Consensus 372 gISl~Ef~~Ff~F 384 (489)
T KOG2643|consen 372 GISLQEFKAFFRF 384 (489)
T ss_pred CcCHHHHHHHHHH
Confidence 7999999988875
No 68
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.49 E-value=0.00011 Score=42.74 Aligned_cols=27 Identities=15% Similarity=0.362 Sum_probs=23.2
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020286 98 IEEFIYQLLDVNDDGVLGRSDLESVVI 124 (328)
Q Consensus 98 ~l~~~F~l~D~d~~G~Is~~El~~~l~ 124 (328)
+++.+|+.||.|++|.|+.+|+..+++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 367899999999999999999999887
No 69
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.45 E-value=0.00023 Score=40.66 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=23.9
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHHh
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (328)
++++|+.+|+++ +|.|+++||..++..
T Consensus 2 ~~~~F~~~D~d~-dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDG-DGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTS-SSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCC-CCcCCHHHHHHHHHh
Confidence 568999999999 999999999998764
No 70
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=97.42 E-value=0.00053 Score=66.47 Aligned_cols=102 Identities=28% Similarity=0.385 Sum_probs=79.0
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhccCCC--CC---------CCCHHHHHhhhcCc------hhHHHHHHHHhccCCCCCce
Q 020286 16 ASRSFAQHELEDLKSLFKSLAAQSQSN--GR---------YISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKL 78 (328)
Q Consensus 16 ~~~~fs~~ei~~l~~~F~~l~~~~~~~--~g---------~i~~~~f~~~~~~~------~~~~~~lf~~~d~~~~~g~I 78 (328)
..+.|+..++..|+++|..--.....+ .. .++...|...+... ..+++++|..+|.+. +|.+
T Consensus 494 ~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~-~g~L 572 (671)
T KOG4347|consen 494 QTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSM-TGLL 572 (671)
T ss_pred ccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhcccCC-ccee
Confidence 345799999999999997632110001 11 23344444445543 346899999999999 9999
Q ss_pred eHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHH
Q 020286 79 TFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDL 119 (328)
Q Consensus 79 ~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El 119 (328)
+|.+++.+++.++.+..-++++++|+++|.+++ ....+|+
T Consensus 573 tf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 573 TFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred EHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 999999999999999999999999999999999 8888888
No 71
>PF14658 EF-hand_9: EF-hand domain
Probab=97.37 E-value=0.00061 Score=46.68 Aligned_cols=61 Identities=10% Similarity=0.174 Sum_probs=55.3
Q ss_pred HHHHHhccCCCCCceeHHHHHHHHHhhcC-CCHHHHHHHHHHHhcCCCC-CccCHHHHHHHHHH
Q 020286 64 RMFNLVTQKRNDHKLTFEDLVVAKATYEK-GTKDEIEEFIYQLLDVNDD-GVLGRSDLESVVIA 125 (328)
Q Consensus 64 ~lf~~~d~~~~~g~I~f~eF~~~l~~~~~-~~~~~~l~~~F~l~D~d~~-G~Is~~El~~~l~~ 125 (328)
..|++||..+ .|.|.-..++.+|..+.. ...++.++.+.+.+|.++. |.|+.+.+..+++.
T Consensus 2 ~~F~~fD~~~-tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQK-TGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcC-CceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 4689999999 999999999999998885 7778999999999999998 99999999988865
No 72
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.35 E-value=0.0014 Score=54.55 Aligned_cols=99 Identities=21% Similarity=0.335 Sum_probs=72.9
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhh---cCc-h-hHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCC
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYF---GLK-G-ALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG 93 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~---~~~-~-~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~ 93 (328)
.|+.++|+.+...|..+|.+ .+|.|+..+++.++ |.| . .-...+....|.|. +|+|+|.+|+-++.....+
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~---rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~-dgklSfreflLIfrkaaag 167 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDED---RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDF-DGKLSFREFLLIFRKAAAG 167 (244)
T ss_pred HHHHHHHHHHHHHHHHhccc---ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhccc-ccchhHHHHHHHHHHHhcc
Confidence 68999999999999999998 89999999999885 444 2 33578888999999 9999999999876544322
Q ss_pred C--HHHHHHHHHHH--hcCCCCCccCHHHHHH
Q 020286 94 T--KDEIEEFIYQL--LDVNDDGVLGRSDLES 121 (328)
Q Consensus 94 ~--~~~~l~~~F~l--~D~d~~G~Is~~El~~ 121 (328)
. .++-+..+=++ .|....|+.....+-+
T Consensus 168 EL~~ds~~~~LAr~~eVDVskeGV~GAknFFe 199 (244)
T KOG0041|consen 168 ELQEDSGLLRLARLSEVDVSKEGVSGAKNFFE 199 (244)
T ss_pred ccccchHHHHHHHhcccchhhhhhhhHHHHHH
Confidence 1 13333444444 6766667766665543
No 73
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.34 E-value=0.00022 Score=54.08 Aligned_cols=67 Identities=22% Similarity=0.345 Sum_probs=53.1
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC---chhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~---~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
+++++|..+....|..++. .+|.|+-++...+|.. +...+..|++..|.++ +|.++++||+.++-.+
T Consensus 3 ~ls~~e~~~y~~~F~~l~~----~~g~isg~~a~~~f~~S~L~~~~L~~IW~LaD~~~-dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP----QDGKISGDQAREFFMKSGLPRDVLAQIWNLADIDN-DGKLDFEEFAIAMHLI 72 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS----STTEEEHHHHHHHHHHTTSSHHHHHHHHHHH-SSS-SSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC----CCCeEeHHHHHHHHHHcCCCHHHHHHHHhhhcCCC-CCcCCHHHHHHHHHHH
Confidence 4678899999999998876 4688998888877653 4678889999999998 9999999999887644
No 74
>PF14658 EF-hand_9: EF-hand domain
Probab=97.34 E-value=0.0009 Score=45.86 Aligned_cols=63 Identities=16% Similarity=0.241 Sum_probs=49.0
Q ss_pred HHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 101 FIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 101 ~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
.+|++||.++.|.|...+|..+++++.+ ....+..++.+.+.+ |+..+++.|+++.|...+..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~-----------~~p~e~~Lq~l~~el-----DP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTG-----------RSPEESELQDLINEL-----DPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcC-----------CCCcHHHHHHHHHHh-----CCCCCCceEeHHHHHHHHHH
Confidence 4799999999999999999999999633 134456788877765 44335699999999887653
No 75
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.27 E-value=0.00074 Score=44.59 Aligned_cols=52 Identities=19% Similarity=0.350 Sum_probs=40.8
Q ss_pred CCCccCHHHHHHHHHHHHHHHhcchhcccCCC-ChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 110 DDGVLGRSDLESVVIAMLEIIFSMEISERGSN-SHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 110 ~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
.+|.|+.+||+.++.. .|.. ..+..++.++..+ |.+ ++|.|+++||..++..
T Consensus 1 ~~G~i~~~~~~~~l~~------------~g~~~~s~~e~~~l~~~~--D~~----~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSK------------LGIKDLSEEEVDRLFREF--DTD----GDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHH------------TTSSSSCHHHHHHHHHHH--TTS----SSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHH------------hCCCCCCHHHHHHHHHhc--ccC----CCCCCCHHHHHHHHHh
Confidence 3799999999999944 2344 6777899999865 433 8999999999998763
No 76
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.26 E-value=0.00031 Score=38.63 Aligned_cols=23 Identities=17% Similarity=0.420 Sum_probs=16.7
Q ss_pred HHHHHHhcCCCCCccCHHHHHHH
Q 020286 100 EFIYQLLDVNDDGVLGRSDLESV 122 (328)
Q Consensus 100 ~~~F~l~D~d~~G~Is~~El~~~ 122 (328)
+.+|+.+|.|++|.|+.+|+.++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 45677777777777777777764
No 77
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.16 E-value=0.0035 Score=58.97 Aligned_cols=100 Identities=19% Similarity=0.326 Sum_probs=73.6
Q ss_pred CCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhh-hcC---c--hhHHHHHHH-HhccCCCCCceeHHHHHHHHHhhcC
Q 020286 20 FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAY-FGL---K--GALGERMFN-LVTQKRNDHKLTFEDLVVAKATYEK 92 (328)
Q Consensus 20 fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~-~~~---~--~~~~~~lf~-~~d~~~~~g~I~f~eF~~~l~~~~~ 92 (328)
=.++|+..+.-.|...+++ +...++.++|.+. ++. + ++...++.. .-|..+ ||.|+|+||..+=..+|
T Consensus 30 a~~~eLr~if~~~as~e~~---ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tK-Dglisf~eF~afe~~lC- 104 (694)
T KOG0751|consen 30 ADPKELRSIFLKYASIEKN---GESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTK-DGLISFQEFRAFESVLC- 104 (694)
T ss_pred CChHHHHHHHHHHhHHhhc---cccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcc-cccccHHHHHHHHhhcc-
Confidence 3455555555555555443 5668899999864 333 2 455555555 446667 99999999999888777
Q ss_pred CCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 93 GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 93 ~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
.++.+-..+|.+||+.++|.++.+++.+++..
T Consensus 105 -~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~ 136 (694)
T KOG0751|consen 105 -APDALFEVAFQLFDRLGNGEVSFEDVADIFGQ 136 (694)
T ss_pred -CchHHHHHHHHHhcccCCCceehHHHHHHHhc
Confidence 34677888999999999999999999998865
No 78
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.10 E-value=0.0024 Score=46.94 Aligned_cols=67 Identities=16% Similarity=0.172 Sum_probs=51.7
Q ss_pred HHHHHHHhccCC-CCCceeHHHHHHHHH-hhcCCC----HHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHH
Q 020286 62 GERMFNLVTQKR-NDHKLTFEDLVVAKA-TYEKGT----KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (328)
Q Consensus 62 ~~~lf~~~d~~~-~~g~I~f~eF~~~l~-~~~~~~----~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~ 128 (328)
+-.+|..++.+. +++.|+.+|+..++. .+.... .++.+..+|+.+|.+++|.|+++|+..++..+..
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 346777777553 278999999999996 332222 2778999999999999999999999998876543
No 79
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=97.04 E-value=0.0046 Score=45.33 Aligned_cols=82 Identities=15% Similarity=0.296 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcc-hhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHH
Q 020286 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSM-EISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 174 (328)
Q Consensus 96 ~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~ 174 (328)
++|.+++|+.+ .|++|.++...|..++..++..--.+ +.+.-|. ++..+...|... .....|+.++|.
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~--~e~sv~sCF~~~--------~~~~~I~~~~Fl 70 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGY--IEPSVRSCFQQV--------QLSPKITENQFL 70 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT----HHHHHHHHHHT--------TT-S-B-HHHHH
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccC--cHHHHHHHhccc--------CCCCccCHHHHH
Confidence 57999999999 57899999999999999987763211 1222222 555555555442 245689999999
Q ss_pred HHHHhcchhHHhhc
Q 020286 175 SWCTLIPSARKFLG 188 (328)
Q Consensus 175 ~~~~~~p~~~~~l~ 188 (328)
+|+...|..+-.|.
T Consensus 71 ~wl~~ePq~lVWLP 84 (90)
T PF09069_consen 71 DWLMSEPQSLVWLP 84 (90)
T ss_dssp HHHHT--TTTTHHH
T ss_pred HHHHhCCCeeeHHH
Confidence 99999997665544
No 80
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.98 E-value=0.0033 Score=59.13 Aligned_cols=56 Identities=21% Similarity=0.342 Sum_probs=48.8
Q ss_pred hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHH
Q 020286 59 GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (328)
Q Consensus 59 ~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~ 128 (328)
...+..+|+.+|.++ +|.|+.+||+. +..+|+.+|.|++|.|+.+|+..++...++
T Consensus 333 ~~~l~~aF~~~D~dg-dG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~~ 388 (391)
T PRK12309 333 THAAQEIFRLYDLDG-DGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGAALR 388 (391)
T ss_pred hHHHHHHHHHhCCCC-CCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 456789999999999 99999999952 467899999999999999999999987655
No 81
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.90 E-value=0.018 Score=60.86 Aligned_cols=101 Identities=16% Similarity=0.248 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC------------chhHHHHHHHHhccCCCCCceeHHHHHH
Q 020286 18 RSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------------KGALGERMFNLVTQKRNDHKLTFEDLVV 85 (328)
Q Consensus 18 ~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~------------~~~~~~~lf~~~d~~~~~g~I~f~eF~~ 85 (328)
+..|++++.++.-.|+.+|++ .+|.++.++|..|++. |.|..+++.+.+|-++ +|.|+..+|+.
T Consensus 2245 ~GVtEe~L~EFs~~fkhFDke---k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r-~G~Vsl~dY~a 2320 (2399)
T KOG0040|consen 2245 NGVTEEQLKEFSMMFKHFDKE---KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNR-DGYVSLQDYMA 2320 (2399)
T ss_pred CCCCHHHHHHHHHHHHHhchh---hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCC-cCcccHHHHHH
Confidence 468999999999999999998 7899999999988543 3567889999999999 99999999999
Q ss_pred HHHhhcC--CCHHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020286 86 AKATYEK--GTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (328)
Q Consensus 86 ~l~~~~~--~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l 123 (328)
+|..--. -...+.++-+|+.+|. +.-+|+.+++..-+
T Consensus 2321 fmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~l 2359 (2399)
T KOG0040|consen 2321 FMISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQNL 2359 (2399)
T ss_pred HHHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhcC
Confidence 8764321 1124478999999998 78899999886533
No 82
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=96.84 E-value=0.015 Score=45.70 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=79.8
Q ss_pred hHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC--CCCccCHHHHHHHHHHHHHHHhcchhcc
Q 020286 60 ALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVN--DDGVLGRSDLESVVIAMLEIIFSMEISE 137 (328)
Q Consensus 60 ~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d--~~G~Is~~El~~~l~~~~~~~~~~~~~~ 137 (328)
+..+.+|..||+.+ +++|++.+--.++..+...+.+..+..+..-++.+ +-..|+.+++.-++.++-..
T Consensus 11 ~e~ke~F~lfD~~g-D~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn-------- 81 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTG-DGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN-------- 81 (152)
T ss_pred HHHHHHHHHHhccC-cccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc--------
Confidence 34578999999998 99999999999999998777777777788887765 34678999988888776443
Q ss_pred cCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 138 RGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 138 ~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
......++.++- ++ .||+. ++|.|...++++.+..
T Consensus 82 k~q~t~edfveg-Lr--vFDke----g~G~i~~aeLRhvLtt 116 (152)
T KOG0030|consen 82 KDQGTYEDFVEG-LR--VFDKE----GNGTIMGAELRHVLTT 116 (152)
T ss_pred cccCcHHHHHHH-HH--hhccc----CCcceeHHHHHHHHHH
Confidence 234445556654 44 34444 8899999999999886
No 83
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.74 E-value=0.018 Score=42.40 Aligned_cols=67 Identities=13% Similarity=0.238 Sum_probs=50.0
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHH
Q 020286 99 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCT 178 (328)
Q Consensus 99 l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~ 178 (328)
+..+|..|. .+.+.+++.||+.+++.-+..... ....+..++.++..+ |.+ +||.|+|.||...+.
T Consensus 10 lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~-------~~~d~~~vd~im~~L--D~n----~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 10 MMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLK-------NQNDPMAVDKIMKDL--DDC----RDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHc-------CCCCHHHHHHHHHHh--CCC----CCCcCcHHHHHHHHH
Confidence 445677777 346789999999999876665433 233456788888876 333 899999999999887
Q ss_pred h
Q 020286 179 L 179 (328)
Q Consensus 179 ~ 179 (328)
.
T Consensus 76 ~ 76 (91)
T cd05024 76 G 76 (91)
T ss_pred H
Confidence 6
No 84
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=96.70 E-value=0.03 Score=44.88 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=67.3
Q ss_pred HHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCC
Q 020286 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNS 142 (328)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~ 142 (328)
..-|..+|+|+ +|.|+-+++..+++.+.+...++.+...++- ..|.|+.--+..++..-+. ...
T Consensus 35 KEAF~~mDqnr-DG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~-----------gtd 98 (171)
T KOG0031|consen 35 KEAFNLMDQNR-DGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLN-----------GTD 98 (171)
T ss_pred HHHHHHHhccC-CCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhc-----------CCC
Confidence 45778888888 8888888888888888776667777765543 6788887766655544322 344
Q ss_pred hHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 143 HQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 143 ~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
+++.|-..+. +||+. +.|.|.-+.++.|+..
T Consensus 99 pe~~I~~AF~--~FD~~----~~G~I~~d~lre~Ltt 129 (171)
T KOG0031|consen 99 PEEVILNAFK--TFDDE----GSGKIDEDYLRELLTT 129 (171)
T ss_pred HHHHHHHHHH--hcCcc----CCCccCHHHHHHHHHH
Confidence 4555555566 45544 7899999999999986
No 85
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.44 E-value=0.017 Score=43.86 Aligned_cols=77 Identities=9% Similarity=0.208 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHH
Q 020286 95 KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 174 (328)
Q Consensus 95 ~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~ 174 (328)
+++.---.|++.|.|+++.++--||...++..... ...+.+..+...+.+.+.+++.+ .+++|- ++||.|.|.||.
T Consensus 65 peqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~--h~~ghep~Pl~sE~Ele~~iD~v-L~DdDf-N~DG~IDYgEfl 140 (144)
T KOG4065|consen 65 PEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDA--HDSGHEPVPLSSEAELERLIDAV-LDDDDF-NGDGVIDYGEFL 140 (144)
T ss_pred HHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhh--hhcCCCCCCCCCHHHHHHHHHHH-hccccc-CCCceeeHHHHH
Confidence 33333337999999999999999999998876553 12334445566677788888774 334444 599999999996
Q ss_pred H
Q 020286 175 S 175 (328)
Q Consensus 175 ~ 175 (328)
.
T Consensus 141 K 141 (144)
T KOG4065|consen 141 K 141 (144)
T ss_pred h
Confidence 5
No 86
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.38 E-value=0.0061 Score=33.40 Aligned_cols=23 Identities=22% Similarity=0.397 Sum_probs=18.8
Q ss_pred HHHHHHhccCCCCCceeHHHHHHH
Q 020286 63 ERMFNLVTQKRNDHKLTFEDLVVA 86 (328)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~ 86 (328)
+++|+.+|.++ +|.|+++||..+
T Consensus 2 ~~~F~~~D~d~-DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDG-DGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTS-SSEEEHHHHHHH
T ss_pred HHHHHHHcCCC-CCcCCHHHHHHH
Confidence 56788888888 888888888764
No 87
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=96.31 E-value=0.011 Score=43.60 Aligned_cols=66 Identities=17% Similarity=0.317 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc--hhHHHHHHHHhccCCC--CCceeHHHHHHHHHhhcCCC
Q 020286 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--GALGERMFNLVTQKRN--DHKLTFEDLVVAKATYEKGT 94 (328)
Q Consensus 24 ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~--~~~~~~lf~~~d~~~~--~g~I~f~eF~~~l~~~~~~~ 94 (328)
.=..+.+.|+.+++ +|.|+++.|.+++|+. ..++..||+++.+.++ .+.|+-+|+..+...++..+
T Consensus 28 ~W~~VE~RFd~La~-----dG~L~rs~Fg~CIGM~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qisD~s 97 (100)
T PF08414_consen 28 GWKEVEKRFDKLAK-----DGLLPRSDFGECIGMKDSKEFAGELFDALARRRGIKGDSITKDELKEFWEQISDQS 97 (100)
T ss_dssp -HHHHHHHHHHH-B-----TTBEEGGGHHHHHT--S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH---
T ss_pred CHHHHHHHHHHhCc-----CCcccHHHHHHhcCCcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhhccC
Confidence 35788999999987 5999999999999997 7899999999976553 57899999998888776443
No 88
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.18 E-value=0.023 Score=36.75 Aligned_cols=48 Identities=17% Similarity=0.250 Sum_probs=28.8
Q ss_pred eeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 78 LTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 78 I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
++|.|....+..+--.-.++-+..+|+.+|..++|.+..+|+..+++.
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 566666666655544444666666777777777777777777766654
No 89
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=96.15 E-value=0.019 Score=45.44 Aligned_cols=83 Identities=19% Similarity=0.276 Sum_probs=63.1
Q ss_pred CCCCCCHHHHHhhhcCc------hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCC--HHH---HHHHHHHHhcCCC
Q 020286 42 NGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGT--KDE---IEEFIYQLLDVND 110 (328)
Q Consensus 42 ~~g~i~~~~f~~~~~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~--~~~---~l~~~F~l~D~d~ 110 (328)
+.|.++.++|..+|..- ..-+.--|+.+|-++ ++.|.-.+....+..++++. .++ .+..+.+--|.|+
T Consensus 84 G~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~-D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~Dg 162 (189)
T KOG0038|consen 84 GRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDG-DEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDG 162 (189)
T ss_pred CCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCC-CCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCC
Confidence 67999999999876652 222445667788888 99999999999999888542 232 3444566679999
Q ss_pred CCccCHHHHHHHHHH
Q 020286 111 DGVLGRSDLESVVIA 125 (328)
Q Consensus 111 ~G~Is~~El~~~l~~ 125 (328)
||.++..|+..++..
T Consensus 163 Dgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 163 DGKLSFAEFEHVILR 177 (189)
T ss_pred CCcccHHHHHHHHHh
Confidence 999999999988744
No 90
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=96.11 E-value=0.016 Score=54.04 Aligned_cols=65 Identities=15% Similarity=0.272 Sum_probs=53.5
Q ss_pred HHHHHHHHhccCCCCCceeHHHHHHHHHhhcC---C-CHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020286 61 LGERMFNLVTQKRNDHKLTFEDLVVAKATYEK---G-TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 126 (328)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~---~-~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~ 126 (328)
-.+.||+.+|.++ +|.|+.+||..+...+.. + -..+.+..+-+..|.|+||.|+..|+.+..+.+
T Consensus 548 ~LetiF~~iD~D~-SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 548 SLETIFNIIDADN-SGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred hHHHHHHHhccCC-CCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 4678999999999 999999999998877752 2 224556667789999999999999999887664
No 91
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=95.94 E-value=0.016 Score=54.55 Aligned_cols=54 Identities=13% Similarity=0.267 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCchhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc
Q 020286 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATYE 91 (328)
Q Consensus 26 ~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~ 91 (328)
..+...|..+|.+ ++|.|+.++|.. .+.+|+.+|.++ +|.|+++||..++....
T Consensus 334 ~~l~~aF~~~D~d---gdG~Is~~E~~~--------~~~~F~~~D~d~-DG~Is~eEf~~~~~~~~ 387 (391)
T PRK12309 334 HAAQEIFRLYDLD---GDGFITREEWLG--------SDAVFDALDLNH-DGKITPEEMRAGLGAAL 387 (391)
T ss_pred HHHHHHHHHhCCC---CCCcCcHHHHHH--------HHHHHHHhCCCC-CCCCcHHHHHHHHHHHH
Confidence 3567788888887 899999999952 578999999999 99999999999887543
No 92
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.91 E-value=0.052 Score=46.80 Aligned_cols=124 Identities=15% Similarity=0.228 Sum_probs=79.5
Q ss_pred CCCCCHHHHHhhhcCc------hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc---CC------CHHHHHHHHHHHhc
Q 020286 43 GRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE---KG------TKDEIEEFIYQLLD 107 (328)
Q Consensus 43 ~g~i~~~~f~~~~~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~---~~------~~~~~l~~~F~l~D 107 (328)
+=.++.++|..++--. ..++..|...+|+++ +..++-.+|+.....-. .+ -.+.+.+..=+++|
T Consensus 213 dlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdg-DkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElID 291 (362)
T KOG4251|consen 213 DLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDG-DKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELID 291 (362)
T ss_pred hhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCC-CeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhh
Confidence 3467778898876431 346788889999999 99999999998543221 11 11456666778899
Q ss_pred CCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHH--HHHHhcchhHH
Q 020286 108 VNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR--SWCTLIPSARK 185 (328)
Q Consensus 108 ~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~--~~~~~~p~~~~ 185 (328)
.|.||.+|.+||..++.-... ...-..++.++.- . +. +++.+++.++.. .|+..-..++.
T Consensus 292 sNhDGivTaeELe~y~dP~n~------------~~alne~~~~ma~---~--d~-n~~~~Ls~eell~r~~~~~rSsLls 353 (362)
T KOG4251|consen 292 SNHDGIVTAEELEDYVDPQNF------------RLALNEVNDIMAL---T--DA-NNDEKLSLEELLERDWLLARSSLLS 353 (362)
T ss_pred cCCccceeHHHHHhhcCchhh------------hhhHHHHHHHHhh---h--cc-CCCcccCHHHHHHHHhhhcccHHHH
Confidence 999999999999987533111 1111223333322 2 22 378899999984 45544444443
No 93
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=95.87 E-value=0.018 Score=54.73 Aligned_cols=67 Identities=21% Similarity=0.272 Sum_probs=56.3
Q ss_pred cCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc--------hhHHHHHHHHhccCCCCCceeHHHHHHHHH
Q 020286 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--------GALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 17 ~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~--------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (328)
.+.||++|+..+++.|.+++. ++|+++..++...|... ...++.+....+.+. +|.|+|++|+..+-
T Consensus 10 ~~~~tq~El~~l~~kF~~~d~----~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~-~g~v~fe~f~~~~~ 84 (627)
T KOG0046|consen 10 QSQLTQEELRELKEKFNKLDD----QKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDA-DGRVEFEEFVGIFL 84 (627)
T ss_pred cccccHHHHHHHHHHHHhhcC----CCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCc-CCccCHHHHHHHHH
Confidence 447999999999999999994 68999999999887652 445777888888888 99999999999543
No 94
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=95.76 E-value=0.042 Score=46.00 Aligned_cols=67 Identities=15% Similarity=0.089 Sum_probs=58.5
Q ss_pred HHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHH
Q 020286 61 LGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (328)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~ 128 (328)
....+|+.+|.+. ||.||+.|+..+|..+......-.++.+.+-.|.|.+|.|+..|+.-+......
T Consensus 100 ~~~~~Fk~yDe~r-DgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 100 DAESMFKQYDEDR-DGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred HHHHHHHHhcccc-cccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 4678999999999 999999999999998886666777888999999999999999999888776433
No 95
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=95.73 E-value=0.02 Score=33.02 Aligned_cols=26 Identities=19% Similarity=0.285 Sum_probs=20.5
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHH
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (328)
.+.+|+.+|.++ +|.|+++||..++.
T Consensus 2 l~~~F~~~D~d~-dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKDG-DGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TTS-SSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCC-CCcCcHHHHHHHHH
Confidence 457888888888 88888888888876
No 96
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=95.38 E-value=0.23 Score=49.65 Aligned_cols=141 Identities=13% Similarity=0.115 Sum_probs=103.4
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc-----hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCC
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG 93 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~ 93 (328)
......-..+...|+..|++ .+|.++..+-..++... ...+.++|+..+... ++++..++|..+....+..
T Consensus 129 ~~~~~~~~wi~~~~~~ad~~---~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~-~~k~~~~~~~~~~~~~~~r 204 (746)
T KOG0169|consen 129 RQRSRREHWIHSIFQEADKN---KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQ-TGKLEEEEFVKFRKELTKR 204 (746)
T ss_pred hhcchHHHHHHHHHHHHccc---cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhc-cceehHHHHHHHHHhhccC
Confidence 34555667888999999987 78999988877765542 456788888887777 9999999999988777654
Q ss_pred CHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHH
Q 020286 94 TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 173 (328)
Q Consensus 94 ~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef 173 (328)
. .+.++|..+-.+ .++++.++|..++...-+ ......+.+++|++.....+. ..+.+.++++.|
T Consensus 205 p---ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~----------e~~~~~~~ae~ii~~~e~~k~--~~~~~~l~ldgF 268 (746)
T KOG0169|consen 205 P---EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQG----------EDGATLDEAEEIIERYEPSKE--FRRHGLLSLDGF 268 (746)
T ss_pred c---hHHHHHHHHhCC-CCccCHHHHHHHHHHhcc----------cccccHHHHHHHHHHhhhhhh--ccccceecHHHH
Confidence 4 577788887654 889999999999988522 234455666776665322211 124567999999
Q ss_pred HHHHHh
Q 020286 174 RSWCTL 179 (328)
Q Consensus 174 ~~~~~~ 179 (328)
..++..
T Consensus 269 ~~yL~S 274 (746)
T KOG0169|consen 269 TRYLFS 274 (746)
T ss_pred HHHhcC
Confidence 999986
No 97
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.20 E-value=0.032 Score=30.34 Aligned_cols=27 Identities=19% Similarity=0.389 Sum_probs=20.4
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 99 EEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 99 l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
++.+|+.+|.+++|.|+.+|+..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456788888888888888888777654
No 98
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.08 E-value=0.12 Score=44.72 Aligned_cols=61 Identities=18% Similarity=0.227 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc--------hhHHHHHHHHhccCCCCCceeHHHHHHHHH
Q 020286 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--------GALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 24 ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~--------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (328)
-.+.|...|.+.|.+ .++.|+..++++-+... .....-.|++.|.++ +|.|+++||..-..
T Consensus 99 srrklmviFsKvDVN---tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdg-DGhvsWdEykvkFl 167 (362)
T KOG4251|consen 99 SRRKLMVIFSKVDVN---TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDG-DGHVSWDEYKVKFL 167 (362)
T ss_pred HHHHHHHHHhhcccC---ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCC-CCceehhhhhhHHH
Confidence 356788899998886 78999999998754432 223456788999999 99999999976443
No 99
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=94.94 E-value=0.032 Score=43.01 Aligned_cols=59 Identities=15% Similarity=0.186 Sum_probs=36.5
Q ss_pred hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHH
Q 020286 59 GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLE 120 (328)
Q Consensus 59 ~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~ 120 (328)
...+...|..+|.++ +|.|+..|+..+...+ ...+.-++..|+.+|.|+||.|+..|..
T Consensus 53 ~~~~~W~F~~LD~n~-d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 53 KRVVHWKFCQLDRNK-DGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWC 111 (113)
T ss_dssp HHHHHHHHHHH--T--SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred hhhhhhhHhhhcCCC-CCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHc
Confidence 456777788888887 8888888877654433 2334456677788888888888887754
No 100
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=94.66 E-value=0.059 Score=34.87 Aligned_cols=44 Identities=9% Similarity=0.131 Sum_probs=33.5
Q ss_pred CCHHHHHhhhcC-----chhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 46 ISPSIFQAYFGL-----KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 46 i~~~~f~~~~~~-----~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
++.++.+.++.. ....+..+|+.+|+.+ +|.++.+||..++..+
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~-~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQ-SGRLEGEEFEEFYKRL 50 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSS-SSEBEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccC-CCCccHHHHHHHHHHh
Confidence 455666666544 2678999999999999 9999999999987654
No 101
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=94.36 E-value=0.27 Score=46.47 Aligned_cols=143 Identities=17% Similarity=0.277 Sum_probs=86.3
Q ss_pred HHHHHHHHHhhccCCCCCCCCHHHHHhhhcC------------chh--------HHHHHHHHhccCCCCCceeHHHHHHH
Q 020286 27 DLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------------KGA--------LGERMFNLVTQKRNDHKLTFEDLVVA 86 (328)
Q Consensus 27 ~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~------------~~~--------~~~~lf~~~d~~~~~g~I~f~eF~~~ 86 (328)
.+.+.+..++.. +.+.+..++|..++.. .+. .+++||=.++..+ .|.|+..+.+..
T Consensus 175 ~~~~~v~~l~~~---~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~-tG~iti~el~~s 250 (493)
T KOG2562|consen 175 RLEQFVNLLIQA---GCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSR-TGRITIQELLRS 250 (493)
T ss_pred HHHHHHHHHhcc---CccceeccccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCcc-CCceeHHHHHHh
Confidence 334445555444 5677777777765432 111 2568888888888 999998887663
Q ss_pred -----HHhhcCCCH---------HHHHHHH---HHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHH
Q 020286 87 -----KATYEKGTK---------DEIEEFI---YQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDV 149 (328)
Q Consensus 87 -----l~~~~~~~~---------~~~l~~~---F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 149 (328)
+..+..... -+..+.+ |--+|.|+||.|+.++|...-... .+..+++.
T Consensus 251 nll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~t---------------lt~~ivdR 315 (493)
T KOG2562|consen 251 NLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHT---------------LTERIVDR 315 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhccc---------------hhhHHHHH
Confidence 222221111 1122223 455699999999999998866442 23457788
Q ss_pred HHHhccccccCcCCCCCCCCHHHHHHHHHh-----cchhHHhhccc
Q 020286 150 FLNAATFSKNGERSSNKSMSFEDFRSWCTL-----IPSARKFLGGL 190 (328)
Q Consensus 150 l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~-----~p~~~~~l~~~ 190 (328)
+|+++ .-.... -.+|.+++++|..++.. .|.-++++-.+
T Consensus 316 IFs~v-~r~~~~-~~eGrmdykdFv~FilA~e~k~t~~SleYwFrc 359 (493)
T KOG2562|consen 316 IFSQV-PRGFTV-KVEGRMDYKDFVDFILAEEDKDTPASLEYWFRC 359 (493)
T ss_pred HHhhc-ccccee-eecCcccHHHHHHHHHHhccCCCccchhhheee
Confidence 88732 111111 26788999999998874 35555554443
No 102
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=93.76 E-value=0.03 Score=43.18 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhc--Cc-hhHHHHHHHHhccCCCCCceeHHHHHH
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG--LK-GALGERMFNLVTQKRNDHKLTFEDLVV 85 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~--~~-~~~~~~lf~~~d~~~~~g~I~f~eF~~ 85 (328)
.........+.=.|..+|.+ ++|.|+..|+..+.. .+ ..=+..+++.+|.++ ++.|+..|+..
T Consensus 47 ~~~~~~~~~~~W~F~~LD~n---~d~~L~~~El~~l~~~l~~~e~C~~~F~~~CD~n~-d~~Is~~EW~~ 112 (113)
T PF10591_consen 47 SSYSECKRVVHWKFCQLDRN---KDGVLDRSELKPLRRPLMPPEHCARPFFRSCDVNK-DGKISLDEWCN 112 (113)
T ss_dssp HTGGGGHHHHHHHHHHH--T----SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH-TT--SSSEEHHHHHH
T ss_pred cchhhhhhhhhhhHhhhcCC---CCCccCHHHHHHHHHHHhhhHHHHHHHHHHcCCCC-CCCCCHHHHcc
Confidence 35556677888899999998 899999999998766 33 555899999999999 99999999875
No 103
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=93.55 E-value=0.38 Score=36.46 Aligned_cols=63 Identities=16% Similarity=0.265 Sum_probs=48.8
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHH
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~ 128 (328)
-..+|+.++. . +|.|+-++-..++.. .+-..+.+..++.+.|.|++|+++.+|+.-++.-+..
T Consensus 12 y~~~F~~l~~-~-~g~isg~~a~~~f~~--S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~ 74 (104)
T PF12763_consen 12 YDQIFQSLDP-Q-DGKISGDQAREFFMK--SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLINR 74 (104)
T ss_dssp HHHHHHCTSS-S-TTEEEHHHHHHHHHH--TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-C-CCeEeHHHHHHHHHH--cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHH
Confidence 3568888774 4 889999998876542 3445688999999999999999999999887776543
No 104
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.66 E-value=0.22 Score=26.77 Aligned_cols=26 Identities=23% Similarity=0.324 Sum_probs=19.6
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHH
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (328)
.+++|+.+|.++ +|.|++.+|..++.
T Consensus 2 ~~~~f~~~d~~~-~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDG-DGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCC-CCcEeHHHHHHHHH
Confidence 356788888877 78888888877664
No 105
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=92.52 E-value=0.86 Score=43.49 Aligned_cols=85 Identities=13% Similarity=0.218 Sum_probs=53.4
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHhhhcCc-----------hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHH
Q 020286 30 SLFKSLAAQSQSNGRYISPSIFQAYFGLK-----------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEI 98 (328)
Q Consensus 30 ~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-----------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~ 98 (328)
..|+.+|+. ++|.++.+++.++++.. .+++++.|.... ...++|.+|...+-.+ .+|.
T Consensus 112 ~aFqlFDr~---~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~----~r~~ny~~f~Q~lh~~----~~E~ 180 (694)
T KOG0751|consen 112 VAFQLFDRL---GNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIR----KRHLNYAEFTQFLHEF----QLEH 180 (694)
T ss_pred HHHHHhccc---CCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHH----HHhccHHHHHHHHHHH----HHHH
Confidence 345555554 45666666666665542 334455444322 2346666666665543 2555
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 99 EEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 99 l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
.+.+|+..|..++|.|+.=+++.++-.
T Consensus 181 ~~qafr~~d~~~ng~is~Ldfq~imvt 207 (694)
T KOG0751|consen 181 AEQAFREKDKAKNGFISVLDFQDIMVT 207 (694)
T ss_pred HHHHHHHhcccCCCeeeeechHhhhhh
Confidence 777999999999999999888887654
No 106
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=91.79 E-value=0.16 Score=45.28 Aligned_cols=75 Identities=19% Similarity=0.333 Sum_probs=49.1
Q ss_pred HHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHH--HhccccccCcCCCCCCCCHHHHHHHHH
Q 020286 101 FIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFL--NAATFSKNGERSSNKSMSFEDFRSWCT 178 (328)
Q Consensus 101 ~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~--~~~~~~~~~~~~~dg~Is~~ef~~~~~ 178 (328)
..|.++|.|+||+++..||..+...-+..+++-.+++. ....+.++.+ ++..+...|.+ .|..||+++|.+-..
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeD---DM~EmeEErlRMREHVMk~vDtN-qDRlvtleEFL~~t~ 323 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEED---DMKEMEEERLRMREHVMKQVDTN-QDRLVTLEEFLNDTD 323 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcch---HHHHHHHHHHHHHHHHHHhcccc-hhhhhhHHHHHhhhh
Confidence 47999999999999999999999877666555444332 2222222222 22233333443 788899999977665
Q ss_pred h
Q 020286 179 L 179 (328)
Q Consensus 179 ~ 179 (328)
+
T Consensus 324 ~ 324 (442)
T KOG3866|consen 324 N 324 (442)
T ss_pred h
Confidence 4
No 107
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.91 E-value=1.2 Score=45.19 Aligned_cols=93 Identities=12% Similarity=0.275 Sum_probs=65.7
Q ss_pred CCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhc
Q 020286 75 DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAA 154 (328)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 154 (328)
++ ++++||. +...+.+.+++..|.++|. .+|.++.+++..+++.+..... . ........+....++.
T Consensus 2 ~~-~~~~~~~-----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~-- 68 (646)
T KOG0039|consen 2 EG-ISFQELK-----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANW-L---SLIKKQTEEYAALIME-- 68 (646)
T ss_pred CC-cchhhhc-----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhh-h---hhhhhhhhHHHHHhhh--
Confidence 56 8999999 5677889999999999998 8999999999999988776522 1 1111222233333333
Q ss_pred cccccCcCCCCCCCCHHHHHHHHHhcchhH
Q 020286 155 TFSKNGERSSNKSMSFEDFRSWCTLIPSAR 184 (328)
Q Consensus 155 ~~~~~~~~~~dg~Is~~ef~~~~~~~p~~~ 184 (328)
+.+.. ..+.+..+++...+...|...
T Consensus 69 ---~~~~~-~~~y~~~~~~~~ll~~~~~~~ 94 (646)
T KOG0039|consen 69 ---ELDPD-HKGYITNEDLEILLLQIPTLL 94 (646)
T ss_pred ---hcccc-ccceeeecchhHHHHhchHHH
Confidence 33442 556899999998888877533
No 108
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=88.36 E-value=0.78 Score=49.33 Aligned_cols=62 Identities=21% Similarity=0.296 Sum_probs=51.7
Q ss_pred HHHHHHhccCCCCCceeHHHHHHHHHhhcCC--CHHH-----HHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYEKG--TKDE-----IEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~--~~~~-----~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
.-+|+.||++. +|++++.+|..++..+... ..++ .++....+.|++.+|+|+..|...++-.
T Consensus 2256 s~~fkhFDkek-~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~ 2324 (2399)
T KOG0040|consen 2256 SMMFKHFDKEK-NGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMIS 2324 (2399)
T ss_pred HHHHHHhchhh-ccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHh
Confidence 36899999999 9999999999998766522 2233 8999999999999999999999887744
No 109
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=87.23 E-value=2.9 Score=42.00 Aligned_cols=117 Identities=12% Similarity=0.202 Sum_probs=80.6
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHH---hcchhccc
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEII---FSMEISER 138 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~---~~~~~~~~ 138 (328)
...+++.||..+ +|.|..-+|...+..+|+...+++++++|++.-..+... ....|..++..+++.- +... .-
T Consensus 472 lN~llNvyD~~R-~g~irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~-~q~~l~lLL~dliqipr~lGE~a--Af 547 (966)
T KOG4286|consen 472 LNWLLNVYDTGR-TGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQC-DQRRLGLLLHDLIQIPRQLGEVA--AF 547 (966)
T ss_pred HHHHHHhcccCC-CcceEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhH-HHHHHHHHHHHHHHHHHHHhHHH--hh
Confidence 467889999999 999999999999999999999999999999997544433 3777777776654431 1100 01
Q ss_pred CCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHhcchhHHhhccc
Q 020286 139 GSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGL 190 (328)
Q Consensus 139 ~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~~p~~~~~l~~~ 190 (328)
|...++--+.. +|... .+.-.|++..|.+|+...|...-+|..+
T Consensus 548 GgsNvepsvrs-----CF~~v---~~~pei~~~~f~dw~~~epqsmVwL~vl 591 (966)
T KOG4286|consen 548 GGSNIEPSVRS-----CFQFV---NNKPEIEAALFLDWMRLEPQSMVWLPVL 591 (966)
T ss_pred cCCCCChHHHH-----HHHhc---CCCCcchHHHHHHHhccCcchhhHHHHH
Confidence 12222223333 33222 2456899999999999999766555444
No 110
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=87.06 E-value=1.2 Score=31.91 Aligned_cols=67 Identities=9% Similarity=0.189 Sum_probs=45.1
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCC-CChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHH
Q 020286 99 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGS-NSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (328)
Q Consensus 99 l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~ 177 (328)
++.+|..|.. +.+.||.++|...+... .+. ......+.+++.+. .........+.+|++.|..|+
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~e-----------Q~~~~~~~~~~~~li~~~--~~~~~~~~~~~lt~~gF~~fL 67 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREE-----------QGEPRLTDEQAKELIEKF--EPDERNRQKGQLTLEGFTRFL 67 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHT-----------SS-TTSSHHHHHHHHHHH--HHHHHHHCTTEEEHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHH-----------hccccCcHHHHHHHHHHH--ccchhhcccCCcCHHHHHHHH
Confidence 5678888865 78889999999998762 222 33466666766653 111100146889999999999
Q ss_pred Hh
Q 020286 178 TL 179 (328)
Q Consensus 178 ~~ 179 (328)
..
T Consensus 68 ~S 69 (83)
T PF09279_consen 68 FS 69 (83)
T ss_dssp HS
T ss_pred CC
Confidence 75
No 111
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.51 E-value=1.9 Score=41.14 Aligned_cols=69 Identities=17% Similarity=0.205 Sum_probs=59.1
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC---chhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYE 91 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~---~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~ 91 (328)
.+++++.++.-..|+.+-.+ ..|.|+=+.-+.+|.. +-+.+..|+++.|.++ ||-++..||..++-.+.
T Consensus 224 ~IT~EQReYYvnQFrtvQpD---p~gfisGsaAknFFtKSklpi~ELshIWeLsD~d~-DGALtL~EFcAAfHLVV 295 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPD---PHGFISGSAAKNFFTKSKLPIEELSHIWELSDVDR-DGALTLSEFCAAFHLVV 295 (737)
T ss_pred ccCHHHHHHHHhhhhcccCC---cccccccHHHHhhhhhccCchHHHHHHHhhcccCc-cccccHHHHHhhHhhee
Confidence 68999999999999999776 6899998777777765 3556889999999999 99999999999887664
No 112
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=84.79 E-value=21 Score=36.95 Aligned_cols=126 Identities=10% Similarity=0.036 Sum_probs=83.5
Q ss_pred CCCCCCHHHHHhhhcCchhHHHHHHHHhc---cCCC------CCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCC
Q 020286 42 NGRYISPSIFQAYFGLKGALGERMFNLVT---QKRN------DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDG 112 (328)
Q Consensus 42 ~~g~i~~~~f~~~~~~~~~~~~~lf~~~d---~~~~------~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G 112 (328)
..|+|....+.+.|....+- .++...+. ...+ -...+++.|..++..+|..+ .+..+|..+..+..-
T Consensus 161 ~~grip~knI~k~F~~~k~~-KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcpR~---eie~iF~ki~~~~kp 236 (1189)
T KOG1265|consen 161 FEGRIPVKNIIKTFSADKKE-KRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCPRP---EIEEIFRKISGKKKP 236 (1189)
T ss_pred ccccccHHHHHHHhhcCCch-hHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCCch---hHHHHHHHhccCCCc
Confidence 46788888888888875322 44444432 1111 23466777788888777544 577899999988889
Q ss_pred ccCHHHHHHHHHHHHHHHhcchhcc----cCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 113 VLGRSDLESVVIAMLEIIFSMEISE----RGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 113 ~Is~~El~~~l~~~~~~~~~~~~~~----~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
++|.++|.++++.- .+++. .-+....+.+..++.+.-. +..+-..|.++.+-|..++..
T Consensus 237 ylT~~ql~dfln~~------QrDpRLNeilfp~~~~~r~~~liekyEp--~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 237 YLTKEQLVDFLNKK------QRDPRLNEILFPPADPRRIQSLIEKYEP--NSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred cccHHHHHHHHhhh------ccCcchhhhhcCCCCHHHHHHHHHHcCC--chhhhhccccchhhhHHHhhC
Confidence 99999999999762 11111 1134445678888886522 222235789999999999987
No 113
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=84.03 E-value=3.3 Score=40.03 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=49.7
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHH
Q 020286 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (328)
Q Consensus 98 ~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~ 177 (328)
.++..|...| |++|+|+..|+..++...-.. .....++++++++... +. +.+|.|++|+|...+
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~---------~g~~~~eei~~~l~~~-----~~-~~~g~v~fe~f~~~~ 83 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLP---------LGYFVREEIKEILGEV-----GV-DADGRVEFEEFVGIF 83 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhccc---------ccchhHHHHHHHHhcc-----CC-CcCCccCHHHHHHHH
Confidence 4666899999 999999999999988773221 2344577888888764 22 378999999999866
Q ss_pred Hh
Q 020286 178 TL 179 (328)
Q Consensus 178 ~~ 179 (328)
..
T Consensus 84 ~~ 85 (627)
T KOG0046|consen 84 LN 85 (627)
T ss_pred Hh
Confidence 54
No 114
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=82.74 E-value=1.1 Score=40.57 Aligned_cols=64 Identities=11% Similarity=0.162 Sum_probs=52.6
Q ss_pred HHHHHHHHhccCCCCCceeHHHHHHHHHhhc-CCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 61 LGERMFNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
.+..-|..+|+|+ ++.|+..|+.-+-..+. ......-.+.+|+.+|.|+|-.|+.+|++..|..
T Consensus 334 vv~w~F~qLdkN~-nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 334 VVHWYFNQLDKNS-NNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeeeeeeecccc-cCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 4556788999999 99999999888777666 4445666888999999999999999999987754
No 115
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=80.36 E-value=2.9 Score=40.87 Aligned_cols=74 Identities=8% Similarity=0.092 Sum_probs=54.5
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC-----chhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCC
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL-----KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG 93 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~-----~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~ 93 (328)
.++++++...+..|..+|.+ +.+.++..+..+.++. +.....++.+..+.+. .|.+...||...++.+..+
T Consensus 586 ~~~~~~~~~~~~rf~~lD~~---k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~-~g~v~l~e~~q~~s~~~~g 661 (680)
T KOG0042|consen 586 KLTPEDFLRRKTRFAFLDAD---KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENL-NGFVELREFLQLMSAIKNG 661 (680)
T ss_pred ccCHHHHHHHHHHHHhhcch---HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-cceeeHHHHHHHHHHHhcC
Confidence 68899999999999999886 5677777776666554 2445566666667766 7888888988888777655
Q ss_pred CHH
Q 020286 94 TKD 96 (328)
Q Consensus 94 ~~~ 96 (328)
..+
T Consensus 662 ~~~ 664 (680)
T KOG0042|consen 662 CTE 664 (680)
T ss_pred ChH
Confidence 443
No 116
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=79.95 E-value=13 Score=36.79 Aligned_cols=107 Identities=17% Similarity=0.266 Sum_probs=69.8
Q ss_pred cCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHH----hhhcCc--hhHHHHHHHHhccCC--C--CCceeHHHHHHH
Q 020286 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQ----AYFGLK--GALGERMFNLVTQKR--N--DHKLTFEDLVVA 86 (328)
Q Consensus 17 ~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~----~~~~~~--~~~~~~lf~~~d~~~--~--~g~I~f~eF~~~ 86 (328)
...+.+.-+..|.+.|..-|.+ ++|.++-.++- .+|+.+ +.....+-...+..- | +..++...|+..
T Consensus 186 ~qelkp~~v~al~RIFki~D~d---~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL 262 (625)
T KOG1707|consen 186 EQELKPRCVKALKRIFKISDSD---NDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFL 262 (625)
T ss_pred cccccHHHHHHHHHHHhhhccc---cccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHH
Confidence 3367888899999999998887 78999977765 457765 222222222222111 0 445566666654
Q ss_pred HHhhc-CCC-----------------------------------------HHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020286 87 KATYE-KGT-----------------------------------------KDEIEEFIYQLLDVNDDGVLGRSDLESVVI 124 (328)
Q Consensus 87 l~~~~-~~~-----------------------------------------~~~~l~~~F~l~D~d~~G~Is~~El~~~l~ 124 (328)
...+. ++- --+.+..+|..||.|+||-++.+|+..+..
T Consensus 263 ~~lfiergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~ 342 (625)
T KOG1707|consen 263 NTLFIERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFS 342 (625)
T ss_pred HHHHHHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhh
Confidence 43332 110 023566789999999999999999999887
Q ss_pred HH
Q 020286 125 AM 126 (328)
Q Consensus 125 ~~ 126 (328)
.+
T Consensus 343 ~~ 344 (625)
T KOG1707|consen 343 TA 344 (625)
T ss_pred hC
Confidence 74
No 117
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=79.84 E-value=4.6 Score=28.82 Aligned_cols=62 Identities=13% Similarity=0.153 Sum_probs=36.2
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHHhhcCC--CHHHHHHHHHHHhcCC----CCCccCHHHHHHHHHH
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKG--TKDEIEEFIYQLLDVN----DDGVLGRSDLESVVIA 125 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~--~~~~~l~~~F~l~D~d----~~G~Is~~El~~~l~~ 125 (328)
++.||..+.. + .+.|+.++|..+|..--+. ...+.++.++..|..+ ..+.+|.+++...|.+
T Consensus 2 i~~if~~ys~-~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 2 IEEIFRKYSS-D-KEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHCT-T-SSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred HHHHHHHHhC-C-CCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 3556666654 3 6677777777776544322 2355555566666433 3566777777766643
No 118
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=79.18 E-value=4.6 Score=36.69 Aligned_cols=95 Identities=9% Similarity=0.016 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC----c--hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHH
Q 020286 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL----K--GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIE 99 (328)
Q Consensus 26 ~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~----~--~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l 99 (328)
..+...|..+|.. .+|.++..+-...+.. + ...++--|+.|+..- ||.+.-.+|...+.... +..+-.+
T Consensus 259 d~l~~~f~LFde~---~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~e-Dg~~ge~~ls~ilq~~l-gv~~l~v 333 (412)
T KOG4666|consen 259 DKLAPTFMLFDEG---TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAE-DGISGEHILSLILQVVL-GVEVLRV 333 (412)
T ss_pred hhhhhhhheecCC---CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhccccc-ccccchHHHHHHHHHhc-Ccceeec
Confidence 6777888888775 6788887665543322 2 567888999999888 88888888877665433 3334557
Q ss_pred HHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 100 EFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 100 ~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
-.+|..++...+|+|+.++++++...
T Consensus 334 ~~lf~~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 334 PVLFPSIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred cccchhhhcccCcceeHHHHHHHHHh
Confidence 77999999999999999999998755
No 119
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=78.71 E-value=1.4 Score=39.87 Aligned_cols=69 Identities=13% Similarity=0.293 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHH
Q 020286 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (328)
Q Consensus 96 ~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~ 175 (328)
+..++..|..+|.|.++.|.+.|.+-+=.-+... ..+++-...+++-. |. ++|..||++||..
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~-----------s~~rkC~rk~~~yC-----Dl-NkDKkISl~Ew~~ 394 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKK-----------SKPRKCSRKFFKYC-----DL-NKDKKISLDEWRG 394 (421)
T ss_pred hheeeeeeeeecccccCccchhhcchHHHHHHhh-----------ccHHHHhhhcchhc-----cc-CCCceecHHHHhh
Confidence 4478889999999999999999976544433221 23444555555433 44 3899999999999
Q ss_pred HHHhcc
Q 020286 176 WCTLIP 181 (328)
Q Consensus 176 ~~~~~p 181 (328)
.+...+
T Consensus 395 CL~~~~ 400 (421)
T KOG4578|consen 395 CLGVEK 400 (421)
T ss_pred hhcccc
Confidence 887654
No 120
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=77.16 E-value=6.2 Score=32.12 Aligned_cols=28 Identities=32% Similarity=0.377 Sum_probs=13.2
Q ss_pred HHHHHHHHhccCCCCCceeHHHHHHHHHh
Q 020286 61 LGERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (328)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (328)
.++-+|..+.... ...|+|++|+.+|..
T Consensus 42 dvDiiF~Kvk~k~-~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 42 DVDIIFSKVKAKG-ARKITFEQFLEALAE 69 (154)
T ss_dssp HHHHHHHHHT-SS--SEEEHHHHHHHHHH
T ss_pred HHHHHHHHhhcCC-CcccCHHHHHHHHHH
Confidence 3455555543333 344666666555543
No 121
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=75.53 E-value=20 Score=37.34 Aligned_cols=99 Identities=13% Similarity=0.051 Sum_probs=73.4
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc-------hhHHHHHHHHhccCCC--CCceeHHHHHHHHHh
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-------GALGERMFNLVTQKRN--DHKLTFEDLVVAKAT 89 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~-------~~~~~~lf~~~d~~~~--~g~I~f~eF~~~l~~ 89 (328)
..++..+.++...|...++. ..+.++.++|..++-.. ....+.+|..+.+... .|.++|.+|...+..
T Consensus 740 ~~sQ~v~~ElrAle~~~~~~---d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R 816 (890)
T KOG0035|consen 740 GTSQYVLDELRALENEQDKI---DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLER 816 (890)
T ss_pred chhHHHHHHHHHHHhHHHHh---hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhh
Confidence 56778888999999998876 67889999999885442 3356677777654422 478999999998864
Q ss_pred hc-CCCHHHHHHHHHHHhcCCCCCccCHHHHHH
Q 020286 90 YE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLES 121 (328)
Q Consensus 90 ~~-~~~~~~~l~~~F~l~D~d~~G~Is~~El~~ 121 (328)
-. ..+.+.++..+|+..=++.. +|..+||..
T Consensus 817 ~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 817 EYEDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hhhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 44 45667888888888865444 688888876
No 122
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=74.28 E-value=17 Score=36.88 Aligned_cols=66 Identities=8% Similarity=0.166 Sum_probs=55.3
Q ss_pred hhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 59 GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 59 ~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
..++..+|+..|++. +|.+++.+-..++..+.-.-.+.+++.+|+-.|..+++.+..+++.++-..
T Consensus 135 ~~wi~~~~~~ad~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~ 200 (746)
T KOG0169|consen 135 EHWIHSIFQEADKNK-NGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKE 200 (746)
T ss_pred HHHHHHHHHHHcccc-ccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHh
Confidence 346778889999999 999999999998877765556788999999998889999999998877654
No 123
>PLN02952 phosphoinositide phospholipase C
Probab=74.03 E-value=23 Score=35.44 Aligned_cols=93 Identities=6% Similarity=0.144 Sum_probs=56.7
Q ss_pred CCceeHHHHHHHHHhhcC--CCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHH
Q 020286 75 DHKLTFEDLVVAKATYEK--GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 152 (328)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~--~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 152 (328)
.|.++|++|.++...+.. ......+..+|..|-. +++.++.++|..++...-+. .....+.+..++.
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e----------~~~~~~~~~~i~~ 82 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDE----------LDCTLAEAQRIVE 82 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCC----------cCCCHHHHHHHHH
Confidence 568999999887776642 2245668888888865 34689999999988773111 1123333444433
Q ss_pred hccc--cccCcCCCCCCCCHHHHHHHHHh
Q 020286 153 AATF--SKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 153 ~~~~--~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
+..- ..... .+...++++.|..|+..
T Consensus 83 ~~~~~~~~~~~-~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 83 EVINRRHHVTR-YTRHGLNLDDFFHFLLY 110 (599)
T ss_pred HHHhhcccccc-ccccCcCHHHHHHHHcC
Confidence 2100 00000 12346999999999975
No 124
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.30 E-value=7.6 Score=29.75 Aligned_cols=57 Identities=19% Similarity=0.247 Sum_probs=41.2
Q ss_pred HHHHHhccCCCCCceeHHHHHHHHHhhcC----C------CHHHHHHH----HHHHhcCCCCCccCHHHHHH
Q 020286 64 RMFNLVTQKRNDHKLTFEDLVVAKATYEK----G------TKDEIEEF----IYQLLDVNDDGVLGRSDLES 121 (328)
Q Consensus 64 ~lf~~~d~~~~~g~I~f~eF~~~l~~~~~----~------~~~~~l~~----~F~l~D~d~~G~Is~~El~~ 121 (328)
..|+..|-++ ++.++=-|.+.++..... + ..+..+.. +.+--|.|+||+|++-|+.+
T Consensus 71 HYF~MHDldk-nn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 71 HYFSMHDLDK-NNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhhhhccCc-CCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 5677888888 999999999999887753 1 11333333 44445788999999999865
No 125
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=73.02 E-value=9.6 Score=38.71 Aligned_cols=67 Identities=15% Similarity=0.329 Sum_probs=56.0
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhh---cCchhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYF---GLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~---~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
..+.+|..+-.+.|..+-. ..|.|+-+.=..+| ++|.+.+..|+.+-|.|+ ||++|..||..++-.+
T Consensus 9 avT~~Er~K~~~qF~~Lkp----~~gfitg~qArnfflqS~LP~~VLaqIWALsDldk-DGrmdi~EfSIAmkLi 78 (1118)
T KOG1029|consen 9 AVTDEERQKHDAQFGQLKP----GQGFITGDQARNFFLQSGLPTPVLAQIWALSDLDK-DGRMDIREFSIAMKLI 78 (1118)
T ss_pred ccchHHHHHHHHHHhccCC----CCCccchHhhhhhHHhcCCChHHHHHHHHhhhcCc-cccchHHHHHHHHHHH
Confidence 4688999999999999876 57899988777664 345788899999999999 9999999999887544
No 126
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=72.76 E-value=12 Score=26.06 Aligned_cols=51 Identities=10% Similarity=0.103 Sum_probs=37.0
Q ss_pred CCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHH
Q 020286 75 DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (328)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~ 128 (328)
+..|+|...+.++......+. +..+...|+.=..+.|+++|+.+.++.+++
T Consensus 6 sp~~~F~~L~~~l~~~l~~~~---~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHLPPSK---MDLLQKHYEEFKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred CCcccHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 567888888888887765444 444444444446789999999999998766
No 127
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=72.19 E-value=7.9 Score=29.20 Aligned_cols=69 Identities=13% Similarity=0.182 Sum_probs=45.0
Q ss_pred HHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHhc
Q 020286 104 QLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLI 180 (328)
Q Consensus 104 ~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~~ 180 (328)
++||.+.+.+||.+++.+++.. +..+.+.+...|+..+..+.-+++-+. +. .+...++.+=+...+...
T Consensus 10 RLYDT~tS~YITLedi~~lV~~--g~~f~V~DakTgeDiT~~iL~QII~E~---E~---~g~~~lp~~~L~qlIr~y 78 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVRE--GREFQVVDSKSGDDLTRSILLQIIAEE---ES---GGEPVLSTDFLTQIIRFY 78 (107)
T ss_pred cccCCCccceeeHHHHHHHHHC--CCeEEEEECCCCchhHHHHHHHHHHHH---Hh---CCCCCCCHHHHHHHHHHh
Confidence 5789999999999999999876 222333344455666665555555442 11 255678888777777753
No 128
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=72.16 E-value=11 Score=34.66 Aligned_cols=96 Identities=19% Similarity=0.219 Sum_probs=65.1
Q ss_pred CCHHHHH----HHHHHHHHHhhccCCCCCCCCHHHHHhh---hcC----c-hhHHHHHHHHhccCCCCCceeHHHHHHHH
Q 020286 20 FAQHELE----DLKSLFKSLAAQSQSNGRYISPSIFQAY---FGL----K-GALGERMFNLVTQKRNDHKLTFEDLVVAK 87 (328)
Q Consensus 20 fs~~ei~----~l~~~F~~l~~~~~~~~g~i~~~~f~~~---~~~----~-~~~~~~lf~~~d~~~~~g~I~f~eF~~~l 87 (328)
=+..|+. +|++=|..+-.+ .++......+... |.. . ...+-.+|+.+|.+. ++.++-.|...+
T Consensus 201 Ct~qeL~~lg~RL~dWF~~lhe~---s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~-Dl~Ld~sEl~~I- 275 (434)
T KOG3555|consen 201 CTDQELRRLGNRLRDWFKALHED---SSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNY-DLLLDQSELRAI- 275 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhh---hhccCcchhhcccccccccccCcchhhhhhhhhhcccccc-ccccCHHHhhhh-
Confidence 5677765 556667766443 2222222222221 222 2 456789999999999 999999997654
Q ss_pred HhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020286 88 ATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (328)
Q Consensus 88 ~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l 123 (328)
.....|.-++-.|..+|...||.|+.+|--...
T Consensus 276 ---~ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF 308 (434)
T KOG3555|consen 276 ---ELDKNEACIKPFFNSCDTYKDGSISTNEWCYCF 308 (434)
T ss_pred ---hccCchhHHHHHHhhhcccccCccccchhhhhh
Confidence 234557889999999999999999999865543
No 129
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=71.32 E-value=13 Score=29.14 Aligned_cols=95 Identities=9% Similarity=0.180 Sum_probs=44.2
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCchhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCH
Q 020286 16 ASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTK 95 (328)
Q Consensus 16 ~~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~ 95 (328)
...++..-++..+.+.|+...-... ++..++..++..++. .+|....+.. ....+....- .....
T Consensus 31 k~~~l~lv~l~~v~~~f~~~~l~~~-~d~~l~v~~l~~~L~-------~iy~~l~~~~-p~~~~i~~~~------v~~a~ 95 (127)
T PF09068_consen 31 KRLCLDLVDLSNVIEAFREHGLNQS-NDSSLSVSQLETLLS-------SIYEFLNKRL-PTLHQIPSRP------VDLAV 95 (127)
T ss_dssp HHTTGGG--HHHHHHHHHHTT---T--TSEEEHHHHHHHHH-------HHHHHHHHHS-TTS--HH-----------HHH
T ss_pred HHHhheeeeHHHHHHHHHHcCCCcc-cCCCCCHHHHHHHHH-------HHHHHHHHHC-CCCCCCCchh------HHHHH
Confidence 3334555566666666666543211 123355544444433 4554444333 2222221000 00012
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 96 ~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
+--+.++..+||.+++|.|+.-.++..+..
T Consensus 96 ~L~ln~Ll~vyD~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 96 DLLLNWLLNVYDSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp HHHHHHHHHHH-TT--SEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeeehhHHHHHHHH
Confidence 345788999999999999999888876643
No 130
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=71.06 E-value=7.1 Score=35.76 Aligned_cols=62 Identities=18% Similarity=0.330 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHH
Q 020286 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (328)
Q Consensus 96 ~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~ 175 (328)
...+..+|..+|.|.||.++..||+.+-.. ..+.-|..+|+.. +.. .||.||-.||..
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl~~I~ld----------------knE~CikpFfnsC--D~~----kDg~iS~~EWC~ 306 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSELRAIELD----------------KNEACIKPFFNSC--DTY----KDGSISTNEWCY 306 (434)
T ss_pred hhhhhhhhhccccccccccCHHHhhhhhcc----------------CchhHHHHHHhhh--ccc----ccCccccchhhh
Confidence 456889999999999999999999976533 2345788888875 322 789999999988
Q ss_pred HHHh
Q 020286 176 WCTL 179 (328)
Q Consensus 176 ~~~~ 179 (328)
.+++
T Consensus 307 CF~k 310 (434)
T KOG3555|consen 307 CFQK 310 (434)
T ss_pred hhcc
Confidence 7776
No 131
>KOG4301 consensus Beta-dystrobrevin [Cytoskeleton]
Probab=70.02 E-value=13 Score=34.03 Aligned_cols=106 Identities=11% Similarity=0.150 Sum_probs=71.5
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCC
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSN 141 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~ 141 (328)
...+..++|..+ .|.++--.-..+++.+|.|...++++++|.+.. |++|.+..-...+++..++..- .-+.......
T Consensus 112 laflLaA~ds~~-~g~~~vfavkialatlc~gk~~dklryIfs~is-ds~gim~~i~~~~fl~evlslp-T~v~e~psfg 188 (434)
T KOG4301|consen 112 LAFLLAAEDSEG-QGKQQVFAVKIALATLCGGKIKDKLRYIFSLIS-DSRGIMQEIQRDQFLHEVLSLP-TAVFEGPSFG 188 (434)
T ss_pred HHHHHhhcCccC-CCCceeecchhhhhhhccchHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHcCC-chhhcCCCcc
Confidence 456667778888 888888888888999999999999999999986 4678877777777776654420 0000111222
Q ss_pred ChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHhcc
Q 020286 142 SHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIP 181 (328)
Q Consensus 142 ~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~~p 181 (328)
.++.-++. +|. .+.+++++.|.+-+...|
T Consensus 189 ~te~~a~~-----cf~------qqrKv~Ln~fldtl~sdp 217 (434)
T KOG4301|consen 189 YTELSARL-----CFL------QQRKVELNQFLDTLMSDP 217 (434)
T ss_pred hHHHHHHH-----HHH------HHHHHHHHHHHHHHhcCC
Confidence 23333332 332 346799999999888755
No 132
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=67.00 E-value=24 Score=26.14 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=47.9
Q ss_pred CCCCCHHHHHhh-------hcCchhHHHHHHHHhccCCCCCceeHHHHHHHHHhhc-CCCHHHHHHHHHHHhcCCCCCcc
Q 020286 43 GRYISPSIFQAY-------FGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVL 114 (328)
Q Consensus 43 ~g~i~~~~f~~~-------~~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~~~~~~~l~~~F~l~D~d~~G~I 114 (328)
||.++.+|...+ ++.+.....++...+.... ....++.+|...+...+ .......++.++.+-- .||.+
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA~--ADG~~ 89 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALE-EEAPDLYEFTSLIKEHFDYEERLELVEALWEVAY--ADGEL 89 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH--hcCCC
Confidence 456665554322 3344455667777776655 56788999988876544 2223445666677765 46788
Q ss_pred CHHHHHHHH
Q 020286 115 GRSDLESVV 123 (328)
Q Consensus 115 s~~El~~~l 123 (328)
+..|..-+-
T Consensus 90 ~~~E~~~l~ 98 (104)
T cd07313 90 DEYEEHLIR 98 (104)
T ss_pred CHHHHHHHH
Confidence 888866543
No 133
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=63.32 E-value=13 Score=36.77 Aligned_cols=90 Identities=13% Similarity=0.156 Sum_probs=62.7
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc--hhHHHHHHHHhc-cCCCCCceeHHHHHHHHHhhcC
Q 020286 16 ASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--GALGERMFNLVT-QKRNDHKLTFEDLVVAKATYEK 92 (328)
Q Consensus 16 ~~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~--~~~~~~lf~~~d-~~~~~g~I~f~eF~~~l~~~~~ 92 (328)
..+.+++.-++.+...|..+|.+ ++|.++.+++...|... .+++...+.--. .+. .|.+++..|+...+.++.
T Consensus 305 ~s~ELs~~~~~Fl~~~f~~~D~d---~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~t~~~~-~G~ltl~g~l~~WsL~Tl 380 (625)
T KOG1707|consen 305 QSVELSPKGYRFLVDVFEKFDRD---NDGALSPEELKDLFSTAPGSPWTSSPYKDSTVKNE-RGWLTLNGFLSQWSLMTL 380 (625)
T ss_pred cceeccHHHHHHHHHHHHhccCC---CCCCcCHHHHHHHhhhCCCCCCCCCcccccceecc-cceeehhhHHHHHHHHhh
Confidence 34578999999999999999998 89999999999988773 444433332211 123 789999999998877763
Q ss_pred CCH-HHHHHHHHHHhcCC
Q 020286 93 GTK-DEIEEFIYQLLDVN 109 (328)
Q Consensus 93 ~~~-~~~l~~~F~l~D~d 109 (328)
-+. ....+.+|--|..+
T Consensus 381 ld~~~t~~~L~Ylgf~~~ 398 (625)
T KOG1707|consen 381 LDPRRTLEYLAYLGFPTD 398 (625)
T ss_pred ccHHHHHHHHHhcCCccc
Confidence 333 23334445555544
No 134
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=63.20 E-value=6.3 Score=26.74 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=30.8
Q ss_pred HHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHH
Q 020286 104 QLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 152 (328)
Q Consensus 104 ~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 152 (328)
++||...+.+||.+++.+++..- ..+.+.....|+..+..+.-+++-
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~g--~~~~V~D~ktgeDiT~~iL~QIi~ 56 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVREG--EDFKVVDAKTGEDITRSILLQIIL 56 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHCC--CeEEEEECCCCcccHHHHHHHHHH
Confidence 57899999999999999998761 112333444555555555554443
No 135
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=60.27 E-value=11 Score=26.27 Aligned_cols=54 Identities=13% Similarity=0.216 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCchhHHHHHHHHhccCC------CCCceeHHHHHH
Q 020286 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKR------NDHKLTFEDLVV 85 (328)
Q Consensus 26 ~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~~~~~~~lf~~~d~~~------~~g~I~f~eF~~ 85 (328)
+++.+.|+.++. +.+.|+.+++.+.+.-. .++-+.+.+..-. ..+..||..|+.
T Consensus 6 eqv~~aFr~lA~----~KpyVT~~dLr~~l~pe--~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~ 65 (69)
T PF08726_consen 6 EQVEEAFRALAG----GKPYVTEEDLRRSLTPE--QAEYCISRMPPYEGPDGDAIPGAYDYESFTN 65 (69)
T ss_dssp HHHHHHHHHHCT----SSSCEEHHHHHHHS-CC--CHHHHHCCSEC--SSS----TTEEECHHHHC
T ss_pred HHHHHHHHHHHc----CCCcccHHHHHHHcCcH--HHHHHHHHCcccCCCCcCCCCCCcCHHHHHH
Confidence 567889999965 57999999999886632 2344444443221 147799998875
No 136
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=58.44 E-value=43 Score=36.74 Aligned_cols=59 Identities=19% Similarity=0.381 Sum_probs=42.1
Q ss_pred HHHHhcCCCCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 102 IYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 102 ~F~l~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
.|+-||.|+.|.|++.|+.+.++. ....++..++-+++.+ +. +.+...+|++|.+-...
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~-------------~k~ytqse~dfllsca---e~---dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEG-------------HKHYTQSEIDFLLSCA---EA---DENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhc-------------cccchhHHHHHHHHhh---cc---CccccccHHHHHHHhcC
Confidence 578889999999999999988765 1234566777777653 22 24567899998765543
No 137
>KOG0493 consensus Transcription factor Engrailed, contains HOX domain [General function prediction only]
Probab=58.25 E-value=19 Score=31.60 Aligned_cols=49 Identities=20% Similarity=0.325 Sum_probs=36.6
Q ss_pred chhhccCCCCHHHHHHHHHHHHHHhhccCCCCCCCC---HHHHHhhhcCchhHHHHHHHH
Q 020286 12 RFVSASRSFAQHELEDLKSLFKSLAAQSQSNGRYIS---PSIFQAYFGLKGALGERMFNL 68 (328)
Q Consensus 12 ~l~~~~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~---~~~f~~~~~~~~~~~~~lf~~ 68 (328)
+-+...|.|+.+++++|+..|+. +.+|+ ++++.+-++++...+.-+|+.
T Consensus 245 eeKRPRTAFtaeQL~RLK~EF~e--------nRYlTEqRRQ~La~ELgLNEsQIKIWFQN 296 (342)
T KOG0493|consen 245 EEKRPRTAFTAEQLQRLKAEFQE--------NRYLTEQRRQELAQELGLNESQIKIWFQN 296 (342)
T ss_pred hhcCccccccHHHHHHHHHHHhh--------hhhHHHHHHHHHHHHhCcCHHHhhHHhhh
Confidence 33455668999999999999988 46776 466777788877666666653
No 138
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=55.57 E-value=11 Score=26.09 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020286 95 KDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (328)
Q Consensus 95 ~~~~l~~~F~l~D~d~~G~Is~~El~~~l 123 (328)
..+.+..+|+.+ .++.++||.+||+..+
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l 31 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSL 31 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHc
Confidence 356788899999 7889999999999865
No 139
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=48.89 E-value=40 Score=26.87 Aligned_cols=36 Identities=8% Similarity=0.265 Sum_probs=24.7
Q ss_pred CCceeHHHHHHHHHhhc-CCCHHHHHHHHHHHhcCCC
Q 020286 75 DHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVND 110 (328)
Q Consensus 75 ~g~I~f~eF~~~l~~~~-~~~~~~~l~~~F~l~D~d~ 110 (328)
.+.|+|+.|..+|..++ ...+++..+.+|..|-...
T Consensus 46 ~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 46 EEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp TTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred CCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 56899999999998887 3356888899999996544
No 140
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=48.20 E-value=22 Score=36.32 Aligned_cols=65 Identities=20% Similarity=0.305 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC---chhHHHHHHHHhccCCCCCceeHHHHHHHHHhh
Q 020286 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (328)
Q Consensus 22 ~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~---~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (328)
.....+...+|..+|+. ..|+++-..=...++. +...+..|+.+-|.|+ ||+++-+||+.++-.+
T Consensus 191 ~~~klKY~QlFNa~Dkt---rsG~Lsg~qaR~aL~qS~Lpq~~LA~IW~LsDvd~-DGkL~~dEfilam~li 258 (1118)
T KOG1029|consen 191 QHNKLKYRQLFNALDKT---RSGYLSGQQARSALGQSGLPQNQLAHIWTLSDVDG-DGKLSADEFILAMHLI 258 (1118)
T ss_pred chhhhHHHHHhhhcccc---cccccccHHHHHHHHhcCCchhhHhhheeeeccCC-CCcccHHHHHHHHHHH
Confidence 34455778999999987 7899987777776655 3456778999999999 9999999999876544
No 141
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=47.87 E-value=42 Score=20.91 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC
Q 020286 23 HELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL 57 (328)
Q Consensus 23 ~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~ 57 (328)
.-+..|-..|.+++.. ..+...+++.+|+.++..
T Consensus 3 ~ai~~iI~vFhkYa~~-~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 3 KAIETIIDVFHKYAGK-EGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHHHTS-SSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-CCCCCeEcHHHHHHHHHH
Confidence 4567788899998864 224568999999888654
No 142
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=46.54 E-value=25 Score=18.24 Aligned_cols=17 Identities=41% Similarity=0.552 Sum_probs=11.4
Q ss_pred cCCCCCccCHHHHHHHH
Q 020286 107 DVNDDGVLGRSDLESVV 123 (328)
Q Consensus 107 D~d~~G~Is~~El~~~l 123 (328)
|.|+||.|+.-++..+-
T Consensus 1 DvN~DG~vna~D~~~lk 17 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALLK 17 (21)
T ss_dssp -TTSSSSSSHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHH
Confidence 56788888877776543
No 143
>PF06163 DUF977: Bacterial protein of unknown function (DUF977); InterPro: IPR010382 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=46.46 E-value=84 Score=24.59 Aligned_cols=51 Identities=22% Similarity=0.228 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCchhHHHHHHHHhccC
Q 020286 18 RSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQK 72 (328)
Q Consensus 18 ~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~~~~~~~lf~~~d~~ 72 (328)
..||++|.++|...--.+... .|.++..++....|.....+.+.+..+-..
T Consensus 3 ~~~T~eer~eLk~rIvElVRe----~GRiTi~ql~~~TGasR~Tvk~~lreLVa~ 53 (127)
T PF06163_consen 3 RVFTPEEREELKARIVELVRE----HGRITIKQLVAKTGASRNTVKRYLRELVAR 53 (127)
T ss_pred CcCCHHHHHHHHHHHHHHHHH----cCCccHHHHHHHHCCCHHHHHHHHHHHHHc
Confidence 369999999999999998884 799999999999999877777888766443
No 144
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=46.40 E-value=76 Score=20.37 Aligned_cols=42 Identities=21% Similarity=0.353 Sum_probs=30.1
Q ss_pred CCCCHHHHHHHHHHHHHHhhccCCCCCCCCHH---HHHhhhcCchhHHHHHHH
Q 020286 18 RSFAQHELEDLKSLFKSLAAQSQSNGRYISPS---IFQAYFGLKGALGERMFN 67 (328)
Q Consensus 18 ~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~---~f~~~~~~~~~~~~~lf~ 67 (328)
+.|+++++..|...|.. +...+.+ ++..-++.+...+...|.
T Consensus 5 ~~~t~~q~~~L~~~f~~--------~~~p~~~~~~~la~~l~l~~~~V~~WF~ 49 (57)
T PF00046_consen 5 TRFTKEQLKVLEEYFQE--------NPYPSKEEREELAKELGLTERQVKNWFQ 49 (57)
T ss_dssp SSSSHHHHHHHHHHHHH--------SSSCHHHHHHHHHHHHTSSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH--------hccccccccccccccccccccccccCHH
Confidence 47999999999999997 2345544 445557777666666664
No 145
>PF13171 DUF4004: Protein of unknown function (DUF4004)
Probab=46.15 E-value=1.7e+02 Score=24.82 Aligned_cols=89 Identities=11% Similarity=0.217 Sum_probs=47.1
Q ss_pred cCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCc--h------------hHHHHHHHHhccC--CCCCceeH
Q 020286 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--G------------ALGERMFNLVTQK--RNDHKLTF 80 (328)
Q Consensus 17 ~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~--~------------~~~~~lf~~~d~~--~~~g~I~f 80 (328)
.|.|..++|-.=-+.-..+ ...++.++++.+|.-. + ...+.+.+.+... . ....+|
T Consensus 44 ETFFPrekIL~RIekI~~m-------Kd~~SLDELA~mfSp~~~~~~~~~~~l~~~~ivs~~~~~~f~~~~~~-~~~f~f 115 (199)
T PF13171_consen 44 ETFFPREKILERIEKIQKM-------KDDLSLDELAEMFSPNVSDVVFTEEELLKRNIVSQAVLELFMEQIGE-EEEFSF 115 (199)
T ss_pred cccCcHHHHHHHHHHHHHh-------cccCCHHHHHHHcCCCcccceecHHHHHHcCcccHHHHHHHHHHhCc-cccccH
Confidence 5677777764333333333 3458899999887532 0 0112222222111 1 334555
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH
Q 020286 81 EDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEI 129 (328)
Q Consensus 81 ~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~ 129 (328)
.+.+.++. +-+.-..|.|+.+|.+.++..+...
T Consensus 116 ~e~l~lyv----------------l~~ll~sg~is~eE~k~l~~~l~~~ 148 (199)
T PF13171_consen 116 EELLFLYV----------------LEKLLQSGEISLEEGKMLLQFLEEN 148 (199)
T ss_pred HHHHHHHH----------------HHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 55554332 1111256889999988887775444
No 146
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=44.22 E-value=86 Score=26.01 Aligned_cols=61 Identities=20% Similarity=0.267 Sum_probs=41.1
Q ss_pred HHHHHHhccCCCCCceeHHHHHHHHHhhc-CCCH----HHH--HHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYE-KGTK----DEI--EEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~~~~----~~~--l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
+.||..+++.+ .+.+++.|...++..-. ..+. ... ...+|.+. .+.+|.+.+|+++.+..-
T Consensus 99 e~iF~kya~~~-~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vYDG 166 (174)
T PF05042_consen 99 EEIFSKYAKTG-PDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVYDG 166 (174)
T ss_pred HHHHHHhCCCC-CCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhcch
Confidence 68888888776 78899999988876432 1111 222 33455554 457899999999887643
No 147
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=37.88 E-value=1.6e+02 Score=21.53 Aligned_cols=58 Identities=17% Similarity=0.303 Sum_probs=34.4
Q ss_pred HHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHH---HHHHHHHHhcCCCCCccCHHHHHHH
Q 020286 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDE---IEEFIYQLLDVNDDGVLGRSDLESV 122 (328)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~---~l~~~F~l~D~d~~G~Is~~El~~~ 122 (328)
..++...+.... ....++.+|...+...++.+++. .+..++.+-- .||.++..|-.-+
T Consensus 38 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~r~~~l~~l~~vA~--ADG~~~~~E~~~l 98 (106)
T cd07316 38 RREAIRLFNEGK-ESDFGLEEYARQFRRACGGRPELLLQLLEFLFQIAY--ADGELSEAERELL 98 (106)
T ss_pred HHHHHHHHHHhC-cCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--HcCCCCHHHHHHH
Confidence 344555544333 33478888888877655444443 4555555554 4688888886543
No 148
>PF04783 DUF630: Protein of unknown function (DUF630); InterPro: IPR006868 This region is sometimes found at the N terminus of putative plant bZIP proteins IPR006867 from INTERPRO. The function of this conserved region is not known.
Probab=37.54 E-value=35 Score=22.95 Aligned_cols=17 Identities=35% Similarity=0.305 Sum_probs=13.3
Q ss_pred CCCCCCCCCccchhhcc
Q 020286 1 MGNSQPPPANPRFVSAS 17 (328)
Q Consensus 1 MG~~~S~~~~~~l~~~~ 17 (328)
||+..||..+++.+..+
T Consensus 1 MGC~~SK~d~eeaV~~C 17 (60)
T PF04783_consen 1 MGCSQSKLDDEEAVSLC 17 (60)
T ss_pred CCCCcccccCcHHHHHH
Confidence 99999998777665544
No 149
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=36.99 E-value=2.3e+02 Score=22.95 Aligned_cols=66 Identities=9% Similarity=0.133 Sum_probs=45.6
Q ss_pred HHHHHHhc---cCCCCCceeHHHHHHHHHhhc---CCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH
Q 020286 63 ERMFNLVT---QKRNDHKLTFEDLVVAKATYE---KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEI 129 (328)
Q Consensus 63 ~~lf~~~d---~~~~~g~I~f~eF~~~l~~~~---~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~ 129 (328)
+++|..|. ... ...++=..|..++..+. ..-....+..+|..+-..+...|+.+++..+|..+...
T Consensus 2 ~~~F~~f~~fG~~~-~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~ 73 (154)
T PF05517_consen 2 EAVFKAFASFGKKN-GTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEK 73 (154)
T ss_dssp HHHHHHHHCSSTST-SSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCc-cccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHH
Confidence 45666663 223 56788888988886442 33456778899999876666779999999999876554
No 150
>TIGR01565 homeo_ZF_HD homeobox domain, ZF-HD class. This model represents a class of homoebox domain that differs substantially from the typical homoebox domain described in pfam model pfam00046. It is found in both C4 and C3 plants.
Probab=36.23 E-value=56 Score=21.81 Aligned_cols=42 Identities=14% Similarity=0.219 Sum_probs=27.2
Q ss_pred cCCCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCch
Q 020286 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKG 59 (328)
Q Consensus 17 ~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~~ 59 (328)
-|.||+++++.|.+.|....-..... ..-..++|+.-+|.+.
T Consensus 5 RT~Ft~~Q~~~Le~~fe~~~y~~~~~-~~~~r~~la~~lgl~~ 46 (58)
T TIGR01565 5 RTKFTAEQKEKMRDFAEKLGWKLKDK-RREEVREFCEEIGVTR 46 (58)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCCC-CHHHHHHHHHHhCCCH
Confidence 46899999999999999853210001 1224666777777653
No 151
>smart00549 TAFH TAF homology. Domain in Drosophila nervy, CBFA2T1, human TAF105, human TAF130, and Drosophila TAF110. Also known as nervy homology region 1 (NHR1).
Probab=35.45 E-value=1.8e+02 Score=21.38 Aligned_cols=49 Identities=12% Similarity=0.158 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 117 SDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 117 ~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
.-++.++..++...-+ .+.+.+.+.+..++..+ -++.|+.|||..-++.
T Consensus 3 ~K~k~FL~tLi~ls~~-----~~qpe~~~~Vr~LV~~L---------~~~~i~~EeF~~~Lq~ 51 (92)
T smart00549 3 SKCKRFLTTLIQLSND-----ISQPEVAERVRTLVLGL---------VNGTITAEEFTSRLQE 51 (92)
T ss_pred HHHHHHHHHHHHHhcC-----CCcchHHHHHHHHHHHH---------HhCCCCHHHHHHHHHH
Confidence 3456666666664211 22255666777777765 4589999999888876
No 152
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=35.32 E-value=65 Score=26.74 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020286 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (328)
Q Consensus 96 ~~~l~~~F~l~D~d~~G~Is~~El~~~l~~ 125 (328)
.++.+.+|+.|+..+.+.+|..|+..+++.
T Consensus 95 p~kFe~iF~kya~~~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 95 PQKFEEIFSKYAKTGPDALTLRELWRMLKG 124 (174)
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence 678999999999988899999999999876
No 153
>PF09107 SelB-wing_3: Elongation factor SelB, winged helix ; InterPro: IPR015191 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 3". The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; GO: 0003723 RNA binding, 0003746 translation elongation factor activity, 0005525 GTP binding, 0001514 selenocysteine incorporation, 0005737 cytoplasm; PDB: 2PJP_A 2UWM_A 1WSU_B 1LVA_A 2PLY_A.
Probab=34.89 E-value=65 Score=20.73 Aligned_cols=31 Identities=13% Similarity=0.264 Sum_probs=26.1
Q ss_pred CCCCCHHHHHhhhcCchhHHHHHHHHhccCC
Q 020286 43 GRYISPSIFQAYFGLKGALGERMFNLVTQKR 73 (328)
Q Consensus 43 ~g~i~~~~f~~~~~~~~~~~~~lf~~~d~~~ 73 (328)
+|.|+..+|.+.++.....+-.+.+.+|..+
T Consensus 8 ~~~itv~~~rd~lg~sRK~ai~lLE~lD~~g 38 (50)
T PF09107_consen 8 NGEITVAEFRDLLGLSRKYAIPLLEYLDREG 38 (50)
T ss_dssp TSSBEHHHHHHHHTS-HHHHHHHHHHHHHTT
T ss_pred CCcCcHHHHHHHHCccHHHHHHHHHHHhccC
Confidence 6899999999999998888888888888754
No 154
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=32.74 E-value=2e+02 Score=21.09 Aligned_cols=56 Identities=11% Similarity=0.081 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC----------c------hhHHHHHHHHhccCCCCCceeHHHHHHHHH
Q 020286 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL----------K------GALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (328)
Q Consensus 26 ~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~----------~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (328)
++++-.|..++. ++|.++...|..++.. . .+.++..|+... . ...|+-++|+..+.
T Consensus 3 dKyRylFslisd----~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~--~-~~~I~~~~Fl~wl~ 74 (90)
T PF09069_consen 3 DKYRYLFSLISD----SNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ--L-SPKITENQFLDWLM 74 (90)
T ss_dssp HHHHHHHHHHS-----TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT--T--S-B-HHHHHHHHH
T ss_pred HHHHHHHHHHcC----CCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC--C-CCccCHHHHHHHHH
Confidence 567778888865 5789999888766432 1 223444444431 2 44677777776653
No 155
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=32.15 E-value=87 Score=21.95 Aligned_cols=46 Identities=4% Similarity=-0.021 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcCchhHHHHHHHHh
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLV 69 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~~~~~~~~lf~~~ 69 (328)
..+.++...+-..|...-. .|++.-++|..++..-++..+.+=+.+
T Consensus 9 G~s~e~~~~~~~ql~Q~~~-----~Gkv~~ee~n~~~e~~p~~~~~lAk~~ 54 (75)
T TIGR02675 9 GASAEEADGALIQLSQMLA-----SGKLRGEEINSLLEALPGALQALAKAM 54 (75)
T ss_pred CCCHHHHHHHHHHHHHHHH-----cCcccHHHHHHHHHHhHHHHHHHHHHh
Confidence 6788999999999977654 589999999999865455555555554
No 156
>cd08330 CARD_ASC_NALP1 Caspase activation and recruitment domain found in Human ASC, NALP1, and similar proteins. Caspase activation and recruitment domain (CARD) similar to those found in human ASC (Apoptosis-associated speck-like protein containing a CARD) and NALP1 (CARD7, NLRP1). ASC, an adaptor molecule, and NALP1, a member of the Nod-like receptor (NLR) family, are involved in the assembly of the 'inflammasome', a multiprotein platform, which is responsible for caspase-1 activation and regulation of IL-1beta maturation. In general, CARDs are death domains (DDs) associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They se
Probab=31.36 E-value=85 Score=22.44 Aligned_cols=54 Identities=11% Similarity=0.037 Sum_probs=38.6
Q ss_pred CCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh-cchhHHh
Q 020286 110 DDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL-IPSARKF 186 (328)
Q Consensus 110 ~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~-~p~~~~~ 186 (328)
++|.||.++...+-.. ...++.+..+++-+ ...|..-++-|.+.+.. .|++.+-
T Consensus 26 ~~~Vit~e~~~~I~a~---------------~T~~~kar~Lld~l--------~~kG~~A~~~F~~~L~e~~p~L~~~ 80 (82)
T cd08330 26 GKKVITQEQYSEVRAE---------------KTNQEKMRKLFSFV--------RSWGASCKDIFYQILREEEPYLVED 80 (82)
T ss_pred HCCCCCHHHHHHHHcC---------------CCcHHHHHHHHHHH--------HccCHHHHHHHHHHHHHhChHHHhH
Confidence 4678888887765532 45567778877764 24578889999999985 7877654
No 157
>KOG0488 consensus Transcription factor BarH and related HOX domain proteins [General function prediction only]
Probab=30.14 E-value=1.2e+02 Score=27.74 Aligned_cols=47 Identities=26% Similarity=0.403 Sum_probs=35.9
Q ss_pred hhccCCCCHHHHHHHHHHHHHHhhccCCCCCCCC---HHHHHhhhcCchhHHHHHHHH
Q 020286 14 VSASRSFAQHELEDLKSLFKSLAAQSQSNGRYIS---PSIFQAYFGLKGALGERMFNL 68 (328)
Q Consensus 14 ~~~~~~fs~~ei~~l~~~F~~l~~~~~~~~g~i~---~~~f~~~~~~~~~~~~~lf~~ 68 (328)
+..-|.||..++.+|.+.|..- .+|+ +.++..-+++.+..+..+|+.
T Consensus 173 RksRTaFT~~Ql~~LEkrF~~Q--------KYLS~~DR~~LA~~LgLTdaQVKtWfQN 222 (309)
T KOG0488|consen 173 RKSRTAFSDHQLFELEKRFEKQ--------KYLSVADRIELAASLGLTDAQVKTWFQN 222 (309)
T ss_pred ccchhhhhHHHHHHHHHHHHHh--------hcccHHHHHHHHHHcCCchhhHHHHHhh
Confidence 3445589999999999999882 4555 456777888887777777764
No 158
>PF00325 Crp: Bacterial regulatory proteins, crp family; InterPro: IPR001808 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. This family groups together a range of proteins, including anr, crp, clp, cysR, fixK, flp, fnr, fnrN, hlyX and ntcA [, ]. Within this family, the HTH motif is situated towards the C terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2OZ6_A 1CGP_B 2GZW_C 1O3T_B 3ROU_A 2CGP_A 3RDI_A 1I5Z_A 3IYD_H 3FWE_B ....
Probab=29.69 E-value=71 Score=18.47 Aligned_cols=27 Identities=15% Similarity=0.343 Sum_probs=19.9
Q ss_pred CCHHHHHhhhcCchhHHHHHHHHhccC
Q 020286 46 ISPSIFQAYFGLKGALGERMFNLVTQK 72 (328)
Q Consensus 46 i~~~~f~~~~~~~~~~~~~lf~~~d~~ 72 (328)
++.+++.+++|.....+.|++..+.+.
T Consensus 3 mtr~diA~~lG~t~ETVSR~l~~l~~~ 29 (32)
T PF00325_consen 3 MTRQDIADYLGLTRETVSRILKKLERQ 29 (32)
T ss_dssp --HHHHHHHHTS-HHHHHHHHHHHHHT
T ss_pred cCHHHHHHHhCCcHHHHHHHHHHHHHc
Confidence 678899999999888888888877654
No 159
>cd08327 CARD_RAIDD Caspase activation and recruitment domain of RIP-associated ICH-1 homologous protein with a death domain. Caspase activation and recruitment domain (CARD) of RAIDD (RIP-associated ICH-1 homologous protein with a death domain), also known as CRADD (Caspase and RIP adaptor). RAIDD is an adaptor protein that together with the p53-inducible protein PIDD and caspase-2, forms the PIDDosome complex, which is required for caspase-2 activation and plays a role in mediating stress-induced apoptosis. RAIDD contains an N-terminal CARD, which interacts with the caspase-2 CARD, and a C-terminal Death domain (DD), which interacts with the DD of PIDD. In general, CARDs are DDs associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodime
Probab=29.53 E-value=1.2e+02 Score=22.36 Aligned_cols=57 Identities=19% Similarity=0.231 Sum_probs=41.6
Q ss_pred CCCccCHHHHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHhcchhHHhhcc
Q 020286 110 DDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGG 189 (328)
Q Consensus 110 ~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~~p~~~~~l~~ 189 (328)
++|.||.++...+-. .....+.+..+++-+ ..-|.--|+.|.+.+...|.+.+-|-.
T Consensus 32 ~~gIlT~~~~e~I~a---------------~~T~~~k~~~LLdiL--------p~RG~~AF~~F~~aL~e~~~l~~~l~~ 88 (94)
T cd08327 32 QEGILTESHVEEIES---------------QTTSRRKTMKLLDIL--------PSRGPKAFHAFLDSLEEFPWVRDKLLK 88 (94)
T ss_pred hCCCCCHHHHHHHHc---------------cCChHHHHHHHHHHH--------HhhChhHHHHHHHHHHHHHHHHHHHHH
Confidence 468899988776542 245566778878754 245788899999999888888766543
No 160
>PLN02952 phosphoinositide phospholipase C
Probab=28.22 E-value=3.3e+02 Score=27.53 Aligned_cols=80 Identities=8% Similarity=-0.038 Sum_probs=50.4
Q ss_pred CCCCCHHHHHhhhcC-------chhHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCC--CHHHHHHHHHHHh----c--
Q 020286 43 GRYISPSIFQAYFGL-------KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG--TKDEIEEFIYQLL----D-- 107 (328)
Q Consensus 43 ~g~i~~~~f~~~~~~-------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~--~~~~~l~~~F~l~----D-- 107 (328)
.|.++.++|..+... +.+.+..||..+..+ .+.++.++|..+|...-+. ...+.+..++..+ .
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~--~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVG--GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCC--CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 578888888755332 256788899888654 4589999999998766532 2233344343322 1
Q ss_pred -CCCCCccCHHHHHHHHH
Q 020286 108 -VNDDGVLGRSDLESVVI 124 (328)
Q Consensus 108 -~d~~G~Is~~El~~~l~ 124 (328)
..+.+.++.+.+...+.
T Consensus 92 ~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred ccccccCcCHHHHHHHHc
Confidence 11234478888887775
No 161
>KOG4629 consensus Predicted mechanosensitive ion channel [Cell wall/membrane/envelope biogenesis]
Probab=26.09 E-value=1.3e+02 Score=30.97 Aligned_cols=62 Identities=18% Similarity=0.282 Sum_probs=46.8
Q ss_pred hHHHHHHHHhccCCCCCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH
Q 020286 60 ALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEI 129 (328)
Q Consensus 60 ~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~~ 129 (328)
..+.++|+.....+ ...+..+.|...+. ++..+.+|.+++...++.|+++++++.+..++..
T Consensus 404 ~aA~~iF~nv~~p~-~~~i~ld~~~~f~~-------~E~a~~~~slfe~~~~~~Itrs~~~~~iv~~~~E 465 (714)
T KOG4629|consen 404 IAARKIFKNVAKPG-VILIDLDDLLRFMG-------DEEAERAFSLFEGASDENITRSSFKEWIVNIYRE 465 (714)
T ss_pred HHHHHHHhccCCCC-ccchhhhhhhhcCC-------HHHHHHHHHhhhhhcccCccHHHHHHHHHHHHHH
Confidence 45678888887766 66676666665543 6778889999988777779999999988776664
No 162
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=24.56 E-value=2e+02 Score=20.51 Aligned_cols=47 Identities=11% Similarity=0.239 Sum_probs=30.2
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHhhhcC---chhHHHHHHHHhcc
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---KGALGERMFNLVTQ 71 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~~~~f~~~~~~---~~~~~~~lf~~~d~ 71 (328)
.|+.+++..|+++|+.+-.. + .+.++-.+-+.. ..+.++.+.+.+..
T Consensus 27 Gfs~~~i~~l~~ayr~l~~~----~--~~~~~a~~~l~~~~~~~~~v~~~~~Fi~~ 76 (83)
T PF13720_consen 27 GFSKEEISALRRAYRILFRS----G--LTLEEALEELEEEYPDSPEVREIVDFIRN 76 (83)
T ss_dssp TS-HHHHHHHHHHHHHHHTS----S--S-HHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhC----C--CCHHHHHHHHHHhccCCHHHHHHHHHHHh
Confidence 79999999999999998663 2 454443332222 26677777776653
No 163
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=23.14 E-value=37 Score=28.73 Aligned_cols=46 Identities=13% Similarity=0.237 Sum_probs=32.7
Q ss_pred CCceeHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCccCHHHHHHH
Q 020286 75 DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESV 122 (328)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~~~~~~l~~~F~l~D~d~~G~Is~~El~~~ 122 (328)
+|.++-.|++-.-+.+. .-+.-....|+-+|.|+||+|+.+|-...
T Consensus 202 d~~~sh~el~pl~ap~i--pme~c~~~f~e~cd~~nd~~ial~ew~~c 247 (259)
T KOG4004|consen 202 DGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGC 247 (259)
T ss_pred cccccccccccccCCcc--cHHhhchhhhhcccCCCCCceeHHHhhcc
Confidence 77777777654322221 23666778999999999999999986543
No 164
>KOG0842 consensus Transcription factor tinman/NKX2-3, contains HOX domain [Transcription]
Probab=22.85 E-value=77 Score=28.92 Aligned_cols=42 Identities=21% Similarity=0.322 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCC---HHHHHhhhcCchhHHHHHHHH
Q 020286 19 SFAQHELEDLKSLFKSLAAQSQSNGRYIS---PSIFQAYFGLKGALGERMFNL 68 (328)
Q Consensus 19 ~fs~~ei~~l~~~F~~l~~~~~~~~g~i~---~~~f~~~~~~~~~~~~~lf~~ 68 (328)
-||+.|+.+|.++|+. ..+|+ ++++...+++....+.-+|+.
T Consensus 159 LFSqAQV~ELERRFrq--------QRYLSAPERE~LA~~LrLT~TQVKIWFQN 203 (307)
T KOG0842|consen 159 LFSQAQVYELERRFRQ--------QRYLSAPEREHLASSLRLTPTQVKIWFQN 203 (307)
T ss_pred ccchhHHHHHHHHHHh--------hhccccHhHHHHHHhcCCCchheeeeeec
Confidence 5999999999999987 35555 788999999886666666653
No 165
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=21.93 E-value=1.3e+02 Score=30.30 Aligned_cols=51 Identities=18% Similarity=0.177 Sum_probs=34.4
Q ss_pred eeHHHHHHHHHhhcC-CCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHH
Q 020286 78 LTFEDLVVAKATYEK-GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (328)
Q Consensus 78 I~f~eF~~~l~~~~~-~~~~~~l~~~F~l~D~d~~G~Is~~El~~~l~~~~~ 128 (328)
|+|..|......+.. ......++.+|.+.|.+.+|.|+..++..-+..+..
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~ 586 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKA 586 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHh
Confidence 444444444433331 122456788999999999999999999887766544
No 166
>PF07531 TAFH: NHR1 homology to TAF; InterPro: IPR003894 The TAF homology (TAFH) or Nervy homology region 1 (NHR1) domain is a domain of 95-100 amino acids present in eukaryotic proteins of the MTG/ETO family and whereof the core ~75-80 residues occur in TAF proteins. The transcription initiation TFIID complex is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs). The TAFH/NHR1 domain is named after fruit fly TATA-box-associated factor 110 (TAF110), human TAF105 and TAF130, and the fruit fly protein Nervy, which is a homologue of human MTG8/ETO [, ]. The human eight twenty-one (ETO or MTG8) and related myeloid transforming gene products MTGR1 and MTG16 as well as the Nervy protein contain the NHR1-4 domains. The NHR1/TAFH domain occurs in the N-terminal part of these proteins, while a MYND-type zinc finger forms the NHR4 domain []. The TAFH/NHR1 domain can be involved in protein-protein interactions, e.g in MTG8/ETO with HSP90 and Gfi-1 []. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2P6V_A 2KNH_A 2PP4_A 2H7B_A.
Probab=21.14 E-value=3.6e+02 Score=20.08 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhcchhcccCCCChHHHHHHHHHhccccccCcCCCCCCCCHHHHHHHHHh
Q 020286 118 DLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (328)
Q Consensus 118 El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~dg~Is~~ef~~~~~~ 179 (328)
-++.++..++...-+ ...+.+.+.+..++..+ -++.|+.|||..-++.
T Consensus 5 Kck~FL~tLi~las~-----~~spev~~~Vr~LV~~L---------~~~~i~~EeF~~~Lq~ 52 (96)
T PF07531_consen 5 KCKNFLNTLIQLASD-----KQSPEVGENVRELVQNL---------VDGKIEAEEFTSKLQE 52 (96)
T ss_dssp HHHHHHHHHHHHHCC-----SC-CCHHHHHHHHHHHH---------HTTSS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-----CCChHHHHHHHHHHHHH---------HcCCCCHHHHHHHHHH
Confidence 455666666554211 24566677788877765 4689999999888875
Done!