BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020288
(328 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 176/315 (55%), Gaps = 54/315 (17%)
Query: 32 HQLPPIPSAP----HHVVGVGGAPGGAGSIRPGSMADRARLAKIPHTEVPLKCPRCDSTN 87
HQLPP+ + P HHV G P G GSMA+RAR A IP PLKCPRCDS+N
Sbjct: 31 HQLPPLQANPNPNHHHVATSAGLPSRMG----GSMAERARQANIPPLAGPLKCPRCDSSN 86
Query: 88 TKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSKSSSSSSKSPANNT 147
TKFCY+NNY+L+QPRHFCK CRRYWT+GGALRNVPVGGGCRRN K + + S +++
Sbjct: 87 TKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNGNLKSSSSSSK 146
Query: 148 EKLQQMGNSNSTSSLPPEIIGHLQQQCNTPHQIPLMPSLHNLSQYNMGSIGLNFG---GI 204
+ N+ S SS Q T HQ P P+L+NL+Q +G IGLN G
Sbjct: 147 QSSSV--NAQSPSS----------GQLRTNHQFPFSPTLYNLTQ--LGGIGLNLAATNGN 192
Query: 205 GASSGVGSSHSTDHVGFQIGSNSSM--------------SSSAILSAGGGVQQFTFFEPP 250
+ +GSS +GF G N+S + + ++++ G + F F+ P
Sbjct: 193 NQAHQIGSSLMMSDLGFLHGRNTSTPMTGNIHENNNNNNNENNLMASVGSLSPFALFD-P 251
Query: 251 NTGLYSFQAE-------GIEAPSSLVVASNPRVSEQAPAKMEDHHQELNLSRPFFGIS-- 301
TGLY+FQ + GI S+ +V S RV + P KME+ NLSRP G++
Sbjct: 252 TTGLYAFQNDGNIGNNVGISGSSTSMVDS--RVYQTPPVKMEEQPNLANLSRPVSGLTSP 309
Query: 302 --ENNQY-WSGNNWT 313
+ NQY W G++++
Sbjct: 310 GNQTNQYFWPGSDFS 324
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 190/338 (56%), Gaps = 44/338 (13%)
Query: 1 MVFSSVPVYLDPP-NW-----------HHQ-QPNHQQGAGSEN--PHQLPPIPSAPHHVV 45
MVFSSV +LDPP NW HHQ Q N +G H P P+ HH V
Sbjct: 1 MVFSSVSSFLDPPINWPQSANPNNHPHHHQLQENGSLVSGHHQVLSHHFPQNPNPNHHHV 60
Query: 46 GVGGAPGGAGSIRPGSMADRARLAKIPHT-EVPLKCPRCDSTNTKFCYFNNYSLSQPRHF 104
A S G A+RARLAK E LKCPRCDS NTKFCYFNNY+L+QPRHF
Sbjct: 61 ETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHF 120
Query: 105 CKACRRYWTRGGALRNVPVGGGCRRNKKSKSSSSSSKSPANNTEKLQQMGNSNSTSSLPP 164
CKACRRYWTRGGALRNVPVGGGCRRNKK KS +S S S + N + + N+TS P
Sbjct: 121 CKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMV---NATS---P 174
Query: 165 EIIGHLQQQCNTPHQIPLMPSLHNLSQYNMGSIGLNFGGIGASSGVG---SSHSTDHVGF 221
++Q Q N+ Q P +P+L NL+Q +G IGLN I ++G SS + +GF
Sbjct: 175 TNTSNVQLQTNS--QFPFLPTLQNLTQ--LGGIGLNLAAINGNNGGNGNTSSSFLNDLGF 230
Query: 222 QIGSNSS------MSSSAILSAGGGVQQFTFFEPPNTGLYSFQAEGIEAPSSLVVASNPR 275
G N+S + + ++++ G F F+ GLY+F E SS+ R
Sbjct: 231 FHGGNTSGPVMGNNNENNLMTSLGSSSHFALFD-RTMGLYNFPNEVNMGLSSIGAT---R 286
Query: 276 VSEQAPAKMEDHHQELNLSRPFFGIS----ENNQYWSG 309
VS+ A KMED+H N+SRP G++ ++NQYW+G
Sbjct: 287 VSQTAQVKMEDNHLG-NISRPVSGLTSPGNQSNQYWTG 323
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 174/352 (49%), Gaps = 56/352 (15%)
Query: 1 MVFSSVPV-YLDPPNWHHQQPNHQQG--AGSENPHQ-LPPIPSAPHHVVGVGGAPGGAGS 56
MVFSS+PV D NW Q HQ +NP+ L + S P V G+
Sbjct: 1 MVFSSLPVNQFDSQNWQQQGNQHQLECVTTDQNPNNYLRQLSSPPTSQVA------GSSQ 54
Query: 57 IRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGG 116
R SM +RAR+AK+P E L CPRCDSTNTKFCYFNNYSL+QPRHFCK CRRYWTRGG
Sbjct: 55 ARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 114
Query: 117 ALRNVPVGGGCRRNKKSKSSSSSSKSPANNTEKLQQMGNSNSTSSLPPEIIGHLQQ-QCN 175
+LRNVPVGGG RRNK+SKS S S+ + + S + S P + + Q + N
Sbjct: 115 SLRNVPVGGGFRRNKRSKSRSKSTVVVSTDNTTSTSSLTSRPSYSNPSKFHSYGQIPEFN 174
Query: 176 TPHQIPLMPSLHNLSQYNMGSIGLNFGGIGASSGVGSSHSTDHVGFQIGSNSSMSSS-AI 234
+ +P++P L +L YN + GL+FGG S+ + S MSSS I
Sbjct: 175 S--NLPILPPLQSLGDYNSSNTGLDFGGTQISNMI----------------SGMSSSGGI 216
Query: 235 LSA-----GGGVQQFTF------FEPPNTGLYSFQAEGIEAPSSLVVASNPRVSEQAPAK 283
L A QQF F + LY G+ A + N + E +
Sbjct: 217 LDAWRIPPSQQAQQFPFLINTTGLVQSSNALYPLLEGGVSATQT----RNVKAEENDQDR 272
Query: 284 MEDHHQELNLSRPFFG-----ISENNQY--WSGN-NWTDLSALNNSTSTNHL 327
D NLSR F G N +Y W GN +WT ++ N ST HL
Sbjct: 273 GRDGDGVNNLSRNFLGNININSGRNEEYTSWGGNSSWTGFTSNN---STGHL 321
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 157 bits (398), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 92/145 (63%), Gaps = 11/145 (7%)
Query: 1 MVFSSVPVYLDPPNWHHQQP---NHQ-QGAGSENPHQLPPIPSAPHHVVGVGGA------ 50
MVFSS+ YLD NW P NH GA + H L P
Sbjct: 1 MVFSSIQAYLDSSNWQQAPPSNYNHDGTGASANGGHVLRPQLQPQQQPQQQPHPNGSGGG 60
Query: 51 -PGGAGSIRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACR 109
GG GSIR GSM DRAR A + E LKCPRC+STNTKFCYFNNYSL+QPRHFCK CR
Sbjct: 61 GGGGGGSIRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCR 120
Query: 110 RYWTRGGALRNVPVGGGCRRNKKSK 134
RYWTRGGALRNVPVGGGCRRN+++K
Sbjct: 121 RYWTRGGALRNVPVGGGCRRNRRTK 145
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 71/76 (93%)
Query: 57 IRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGG 116
IRPGSMA+RARLA IP E LKCPRCDSTNTKFCYFNNYSL+QPRHFCKACRRYWTRGG
Sbjct: 74 IRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGG 133
Query: 117 ALRNVPVGGGCRRNKK 132
ALR+VPVGGGCRRNK+
Sbjct: 134 ALRSVPVGGGCRRNKR 149
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 62/66 (93%)
Query: 75 EVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSK 134
E+ L+CPRCDSTNTKFCY+NNYSL+QPR+FCK+CRRYWT+GG LRN+PVGGGCR+NK+S
Sbjct: 52 ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111
Query: 135 SSSSSS 140
SS++ S
Sbjct: 112 SSAARS 117
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 13/104 (12%)
Query: 36 PIPSAPHHVVGVGGAPGGAGSIRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNN 95
P+P H + G S + + + + LKCPRC+S NTKFCY+NN
Sbjct: 12 PVPKPDHRISGT-------------SQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNN 58
Query: 96 YSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSKSSSSS 139
YSLSQPRHFCK+CRRYWTRGGALRNVP+GGGCR+ KKS +SS
Sbjct: 59 YSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPNSS 102
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
Query: 65 RARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVG 124
RA I + LKCPRC+S NTKFCY+NNY+LSQPRHFCK CRRYWT+GG LRNVPVG
Sbjct: 38 RAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVG 97
Query: 125 GGCRRNKKSKS----SSSSSKSPANNTE 148
GGCR+ K+SK+ SSSS+ P +
Sbjct: 98 GGCRKAKRSKTKQVPSSSSADKPTTTQD 125
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 56/64 (87%), Gaps = 2/64 (3%)
Query: 70 KIPHTEVP--LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGC 127
+ P ++P LKCPRCDS NTKFCY+NNYS+SQPR+FCKACRRYWT GG LRNVP+GGGC
Sbjct: 50 RKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGC 109
Query: 128 RRNK 131
R+NK
Sbjct: 110 RKNK 113
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 19/159 (11%)
Query: 80 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSKSSSSS 139
CPRC+S NTKFCY+NNYSLSQPR+FCK+CRRYWT+GG LRNVPVGGGCRRNK+S SS+ S
Sbjct: 50 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSSAFS 109
Query: 140 SKSPAN----NTEKLQQMGNSNSTSSLPPEIIGHLQQQCNTPHQIPLMPSLHNLSQYNMG 195
+ +T+ LQ + + +PP G+ H I L + L ++++
Sbjct: 110 KNNNNKSINFHTDPLQ----NPLITGMPPSSFGY-------DHSIDLNLAFATLQKHHLS 158
Query: 196 SIGL--NFGGIGASSGVGSSHSTDHVGFQIGSNSSMSSS 232
S +FG G S G +ST+ VG G N + ++S
Sbjct: 159 SQATTPSFGFGGDLSIYG--NSTNDVGIFGGQNGTYNNS 195
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 53/57 (92%)
Query: 78 LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSK 134
LKCPRCDS+NTKFCY+NNYSLSQPRHFCKAC+RYWTRGG LRNVPVGG R+NK+ K
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVK 83
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 60/68 (88%)
Query: 75 EVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSK 134
E L+CPRCDSTNTKFCY+NNYSLSQPR+FCK+CRRYWT+GG LRN+P+GG R++K+S
Sbjct: 37 EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSS 96
Query: 135 SSSSSSKS 142
S++ S ++
Sbjct: 97 SATKSLRT 104
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 70 KIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 129
++P E LKCPRCDS NTKFCY+NNY+LSQPRHFCK CRRYWT+GGALRN+PVGGG R+
Sbjct: 26 ELPEQE-QLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 84
Query: 130 -NKKSKSSSSSSKSPANNTEK 149
NK+S SS SS+ EK
Sbjct: 85 SNKRSGSSPSSNLKNQTVAEK 105
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 57/63 (90%)
Query: 75 EVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSK 134
E+ CPRC S+NTKFCY+NNYSL+QPR+FCK CRRYWT+GG+LRNVPVGGGCR++++ K
Sbjct: 22 EITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPK 81
Query: 135 SSS 137
SSS
Sbjct: 82 SSS 84
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 62 MADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNV 121
+ D R + PH + P KCPRC+ST+TKFCY+NNYSLSQPR+FCK CRRYWT+GG LRN+
Sbjct: 58 LMDGGRRLRPPH-DHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNI 116
Query: 122 PVGGGCR 128
PVGGGCR
Sbjct: 117 PVGGGCR 123
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 51/61 (83%)
Query: 72 PHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNK 131
P T+ LKCPRCDS NTKFCY+NNYSLSQPRH+CK CRRYWTRGGALRNVP+GG R
Sbjct: 35 PATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTRNKN 94
Query: 132 K 132
K
Sbjct: 95 K 95
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 14/81 (17%)
Query: 71 IPHTEVPLK--------------CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGG 116
+P E+P K CPRC S+NTKFCY+NNYSLSQPR+FCK CRRYWT+GG
Sbjct: 17 LPEMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGG 76
Query: 117 ALRNVPVGGGCRRNKKSKSSS 137
+LRN+PVGGGCR+ +S+ +S
Sbjct: 77 SLRNIPVGGGCRKRSRSRQNS 97
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 78 LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 130
LKCPRCDS NTKFCY+NNY+LSQPRHFCK+CRRYWT+GGALRNVPVGGG R+N
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 78 LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSKSSS 137
+ CPRC+STNTKFCY+NNYSL+QPR+FCK CRRYWT GG+LRNVPVGG R+NK+S +
Sbjct: 74 VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPL 133
Query: 138 SSSKSP 143
+S +P
Sbjct: 134 ASPSNP 139
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 53/61 (86%)
Query: 72 PHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNK 131
P + + CPRC+STNTKFCY+NNYSL+QPR+FCK CRRYWT GG+LRN+PVGGG R+NK
Sbjct: 47 PEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNK 106
Query: 132 K 132
+
Sbjct: 107 R 107
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 69/96 (71%), Gaps = 12/96 (12%)
Query: 59 PGSMADRARLAKIPHTE-----VP------LKCPRCDSTNTKFCYFNNYSLSQPRHFCKA 107
P ++ R+ KIPH + +P L CPRC+STNTKFCY+NNY+ SQPRHFCK+
Sbjct: 2 PSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKS 61
Query: 108 CRRYWTRGGALRNVPVGGGCRR-NKKSKSSSSSSKS 142
CRRYWT GG LR++PVGG R+ +K+S++ SS++ +
Sbjct: 62 CRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATT 97
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 62 MADRARLAKIPHT--EVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALR 119
M D +L T + P CPRC+S+NTKFCY+NNYSL+QPR+ CK+CRRYWT GG+LR
Sbjct: 50 MDDEKKLMTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLR 109
Query: 120 NVPVGGGCRRNKK 132
NVPVGGG R+NKK
Sbjct: 110 NVPVGGGSRKNKK 122
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 56/79 (70%)
Query: 54 AGSIRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWT 113
+G R +M I + L CPRCDS+NTKFCY+NNY+ SQPRHFCKACRRYWT
Sbjct: 6 SGEPRRIAMKPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWT 65
Query: 114 RGGALRNVPVGGGCRRNKK 132
GG LR+VPVGGG R++ K
Sbjct: 66 HGGTLRDVPVGGGTRKSAK 84
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 50/60 (83%)
Query: 80 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSKSSSSS 139
CPRCDS NTKFC++NNYS SQPR+FCK CRRYWT GGALRN+PVGG CR+ K+ K SS
Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKRLKVDQSS 85
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 78 LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGG 125
L CPRC+STNTKFCY+NNYSL+QPR+FCK CRRYWT GG+LRNVPVGG
Sbjct: 80 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 48/58 (82%)
Query: 78 LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSKS 135
L CPRC S TKFCY+NNY+++QPRHFCKAC+RYWT GG +RNVPVG G R+NK S S
Sbjct: 110 LPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSS 167
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 47/56 (83%)
Query: 72 PHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGC 127
P + L CPRC+S NTKFCY+NNYSL+QPR+FCK CRRYWT GG+LRN+PVGGG
Sbjct: 43 PEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGV 98
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 49/55 (89%)
Query: 72 PHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGG 126
P+ PL CPRC+ST TKFCY+NNY+L+QPR++CK+CRRYWT+GG LR+VPVGGG
Sbjct: 23 PNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGG 77
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 70 KIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 129
K+ + L CPRC+S TKFCY+NNY+++QPRHFCK C+RYWT GG +RNVPVG G R+
Sbjct: 130 KLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRK 189
Query: 130 NK 131
NK
Sbjct: 190 NK 191
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%)
Query: 80 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 130
CPRC S +TKFCY+NNY+ SQPRHFCK CRRYWT+GG LRNVPVGGG R+
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKK 99
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Query: 63 ADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 122
+++ + K P +P CPRC+S TKFCY+NNY+++QPRHFCKAC+RYWT GG +R+VP
Sbjct: 41 SEKDKTLKKPTKILP--CPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVP 98
Query: 123 VGGGCRRNK 131
+G G R+NK
Sbjct: 99 IGAGRRKNK 107
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 64 DRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPV 123
+++ K P +P CPRC+S NTKFCY+NNY+++QPR+FC+ C+RYWT GG++RNVPV
Sbjct: 120 EKSTALKKPDKLIP--CPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPV 177
Query: 124 GGGCRRNK 131
G G R+NK
Sbjct: 178 GSGRRKNK 185
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Query: 70 KIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 129
K P +P CPRC S TKFCYFNNY+++QPRHFCK C+RYWT GGALRNVPVG G R+
Sbjct: 56 KRPDKIIP--CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 113
Query: 130 NK 131
+K
Sbjct: 114 SK 115
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 63 ADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 122
++ + ++ + L CPRC+S +TKFCY+NNY+++QPRHFC+ C+RYWT GG++R VP
Sbjct: 90 SEEEKTTELKKPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVP 149
Query: 123 VGGGCRRNK 131
VG G R+NK
Sbjct: 150 VGSGRRKNK 158
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 78 LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNK 131
+ CPRC S TKFCYFNNY+++QPRHFCK C RYWT GGALRNVPVG G R++K
Sbjct: 58 IACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSK 111
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 41/49 (83%)
Query: 80 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCR 128
C RCDS NTKFCY+NNYS QPR+FCK CRRYWT GGALRNVP+GG R
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSR 75
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%)
Query: 80 CPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSKSSSSS 139
C RCDS NTKFCY+NNY QPR+FCK CRRYWT GGALRN+P+GG R + + S
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSRAKRARVNQPSV 86
Query: 140 SKSPANNTEK 149
++ + T++
Sbjct: 87 ARMVSVETQR 96
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 39/63 (61%)
Query: 77 PLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSKSS 136
P CPRC S T+F YFNN SQPR+ CK C R WT GG LRN+PV G C ++ K
Sbjct: 20 PRVCPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDKSNLPKID 79
Query: 137 SSS 139
SS
Sbjct: 80 QSS 82
>sp|P31423|GRM4_RAT Metabotropic glutamate receptor 4 OS=Rattus norvegicus GN=Grm4 PE=1
SV=1
Length = 912
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 35 PPIPSAPHHVVGVGGAPGGAGSIRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFN 94
PPI + P VVGV GA G + SI +A+ RL KIP P S N+++ +F+
Sbjct: 141 PPIITKPERVVGVIGASGSSVSI---MVANILRLFKIPQISYASTAPDL-SDNSRYDFFS 196
Query: 95 N 95
Sbjct: 197 R 197
>sp|Q68EF4|GRM4_MOUSE Metabotropic glutamate receptor 4 OS=Mus musculus GN=Grm4 PE=2 SV=2
Length = 912
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 35 PPIPSAPHHVVGVGGAPGGAGSIRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFN 94
PPI + P VVGV GA G + SI +A+ RL KIP P S N+++ +F+
Sbjct: 141 PPIITKPERVVGVIGASGSSVSI---MVANILRLFKIPQISYASTAPDL-SDNSRYDFFS 196
Query: 95 N 95
Sbjct: 197 R 197
>sp|Q1ZZH0|GRM4_MACFA Metabotropic glutamate receptor 4 OS=Macaca fascicularis GN=GRM4
PE=2 SV=1
Length = 912
Score = 35.0 bits (79), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 35 PPIPSAPHHVVGVGGAPGGAGSIRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFN 94
PPI + P VVGV GA G + SI +A+ RL KIP P S N+++ +F+
Sbjct: 141 PPIITKPERVVGVIGASGSSVSI---MVANILRLFKIPQISYASTAPDL-SDNSRYDFFS 196
Query: 95 N 95
Sbjct: 197 R 197
>sp|Q14833|GRM4_HUMAN Metabotropic glutamate receptor 4 OS=Homo sapiens GN=GRM4 PE=1 SV=1
Length = 912
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 35 PPIPSAPHHVVGVGGAPGGAGSIRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFN 94
PPI + P VVGV GA G + SI +A+ RL KIP P S N+++ +F+
Sbjct: 141 PPIITKPERVVGVIGASGSSVSI---MVANILRLFKIPQISYASTAPDL-SDNSRYDFFS 196
Query: 95 N 95
Sbjct: 197 R 197
>sp|Q1E702|ATG2_COCIM Autophagy-related protein 2 OS=Coccidioides immitis (strain RS)
GN=ATG2 PE=3 SV=1
Length = 2100
Score = 33.5 bits (75), Expect = 2.5, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 120 NVPVGGGCRRNKKSKSSSSSSKSPANNTEKLQQMGNSNSTSSLPPEI 166
N PVGGG R N+ ++S+ K+P TE+ S STS + P +
Sbjct: 449 NFPVGGGIRDNEPDSATSARGKTPDCQTEQ-----ESPSTSKICPAV 490
>sp|Q5RE34|RTEL1_PONAB Regulator of telomere elongation helicase 1 OS=Pongo abelii GN=RTEL1
PE=2 SV=1
Length = 1302
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 29/109 (26%)
Query: 17 HQQPNHQQGAGSEN--PHQLPPIPSAP----------HHVVG--VGGAPGG---AGSIRP 59
Q+P GAGSE+ P Q P P P + G GAPGG AG +
Sbjct: 1188 RQRPAGTVGAGSEDAGPSQSPGPPHGPAASEWGEPHGRDIAGQQAAGAPGGPLSAGCVCQ 1247
Query: 60 GSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKAC 108
G A+ VP +CP CD + C+ + S+ C AC
Sbjct: 1248 GCGAEDV---------VPFQCPACDFQRCQACWQRHLQASR---MCPAC 1284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,933,245
Number of Sequences: 539616
Number of extensions: 6126466
Number of successful extensions: 20790
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 19903
Number of HSP's gapped (non-prelim): 584
length of query: 328
length of database: 191,569,459
effective HSP length: 118
effective length of query: 210
effective length of database: 127,894,771
effective search space: 26857901910
effective search space used: 26857901910
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)