BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020290
(328 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84K34|SIL10_ARATH E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana
GN=At5g37930 PE=2 SV=1
Length = 349
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 142/243 (58%), Gaps = 3/243 (1%)
Query: 87 VTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEK 146
VTL DP+VLDCP+C EPL IP++QC NGH+ C CC + N+CPSC LP G+ R AMEK
Sbjct: 103 VTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEK 162
Query: 147 VIESIQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNFVGSFHQIYQHFRGV 206
VIE+ +V+C NA YGCKE SY ++ H + C +TPCSCP+ C++ G + + H R
Sbjct: 163 VIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAE 222
Query: 207 HKHAAEEFVYDKVLRITLSVHHDLIILQEEKNGDLFILNNSTEPDGYRISVNCIAPSCKG 266
HK FV++ L I+L ++ ILQEE +G + ++ +SV+CIAP G
Sbjct: 223 HKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPG 282
Query: 267 -GVVYSIVAK-SGGAVYEFNSCTKSIQNWDENNPPSVASLLVPSDFFGSYGQLHLGVRIQ 324
G + +AK + ++ + K+IQ N P +L+PS F L+L + I
Sbjct: 283 VGRLSCRLAKITVDSLLKQGFMVKNIQKV-TNEHPEDGFMLIPSYLFSGNDNLNLQIWIG 341
Query: 325 HPR 327
H R
Sbjct: 342 HGR 344
>sp|Q9FKD9|SINL6_ARATH Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis
thaliana GN=At5g37870 PE=3 SV=1
Length = 281
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 112/180 (62%), Gaps = 2/180 (1%)
Query: 86 TVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAME 145
+ L D ++LDCP+CY+ L IPV+QCGNGH+ C CC L NKCP+C LP GH R AME
Sbjct: 34 SAMLTDLDILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAME 93
Query: 146 KVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNFVGSFHQIYQHFRG 205
+V+ES+ V C AD GC + + Y + H + C+++PCSCP+ CN+ GS+ +Y+H+
Sbjct: 94 RVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDL 153
Query: 206 VHKHAAEEFVYDKVLRIT--LSVHHDLIILQEEKNGDLFILNNSTEPDGYRISVNCIAPS 263
H + + ++ V I + + ++I + + LF++ EP G +SV+CIAPS
Sbjct: 154 THSTGSTAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPS 213
>sp|Q9FKD7|SINL7_ARATH E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana
GN=At5g37890 PE=2 SV=1
Length = 286
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 107/180 (59%), Gaps = 2/180 (1%)
Query: 86 TVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAME 145
+ L D E+LDCP+CYE IP++QC NGH+ C CC L NKCP+C P GH+R AME
Sbjct: 40 STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAME 99
Query: 146 KVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNFVGSFHQIYQHFRG 205
V+ESI + C NA GCK+ +SY ++ H + C ++ C+CP CN+ S+ +Y H+R
Sbjct: 100 SVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRI 159
Query: 206 VHKHAAE--EFVYDKVLRITLSVHHDLIILQEEKNGDLFILNNSTEPDGYRISVNCIAPS 263
H + F+ D L + +++ ++I E LF + EP G ++V+CIAPS
Sbjct: 160 THMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPS 219
>sp|Q9C9M0|SINL4_ARATH E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana
GN=At1g66650 PE=2 SV=1
Length = 329
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 133/259 (51%), Gaps = 21/259 (8%)
Query: 14 GGGASSSRFPKRRRSSRRDLDESEFFEEEEVPTVERQAPEQETRATDSGGGGGGGKGNRT 73
GGG S KR+R + +D+ EEEE +T +
Sbjct: 10 GGGKSHRSSTKRQRRTSVSVDDPSPGEEEE-----------KTLVVLTDDSDSEEDDKPL 58
Query: 74 GDLL----KHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKC 129
GD+L K + P +VTL + VL+CP C++PL P++QC NGH+ C CC L +C
Sbjct: 59 GDVLRTCRKRRVSSPKSVTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRC 118
Query: 130 PSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYD-HGRACHYTPCSCPLA 188
C+LP G R AMEKVI++ V+C NA YGCK+ +Y + H + C + PCSCP+
Sbjct: 119 SFCKLPIGDVRCRAMEKVIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIK 178
Query: 189 ACNFVGSFHQIYQHFRGVHKHA---AEEFVYDK--VLRITLSVHHDLIILQEEKNGDLFI 243
CN++G + + HFR HK + FV+D+ + + L ++I EEK G+LF+
Sbjct: 179 DCNYIGFYKDLINHFRATHKVSPGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFV 238
Query: 244 LNNSTEPDGYRISVNCIAP 262
+ G +V+ IAP
Sbjct: 239 VQGFIGSHGVYATVSHIAP 257
>sp|Q9C6H3|SINL2_ARATH E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana
GN=At1g66620 PE=2 SV=1
Length = 313
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 135/289 (46%), Gaps = 21/289 (7%)
Query: 46 TVERQAPEQETRATDSGGGGGGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLN 105
+ R+ ++ + +S GGG R+G TL + ++LDCP+C L
Sbjct: 6 STSRRKRQRVPSSVESVENGGGDAVARSG-------------TLFELDLLDCPICCHALT 52
Query: 106 IPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEK 165
P++QC NGH+ C CC L NKCPSC LP G+ RS ME+V+E++ V C N +GC EK
Sbjct: 53 SPIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEK 112
Query: 166 MSYSEKYDHGRACHYTPCSCPLAACNFVGSFHQIYQHFRGVHKHAAEEFVYDKVLRITLS 225
SY ++ H + C + C CP CN+ G + +Y HF H + L
Sbjct: 113 FSYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYDTWNQIGCGNFAGAWLR 172
Query: 226 VHHDLIILQEEKNGDLFILNNSTEPDGYRISVNCIAPSCKGGV------VYSIVAKSGGA 279
+ +++LQ + G L + E G ++VNCIAP C GV + + G +
Sbjct: 173 ISEKILVLQYGQ-GPLIAVQCFKETQGMYVTVNCIAP-CAPGVGELSFELSYKMPMGGNS 230
Query: 280 VYEFNSCTKSIQNWDENNPPSVASLLVPSDFFGSYGQLHLGVRIQHPRK 328
F S + P +LVP F G + L + + I+ +K
Sbjct: 231 TMMFKSEEMNRIQKVSFQTPEKDFMLVPYYFLGDFSTLKMEICIRKLKK 279
>sp|Q9C6H2|SINL3_ARATH E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana
GN=At1g66630 PE=2 SV=1
Length = 303
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 20/247 (8%)
Query: 46 TVERQAPEQETRATDSGGGGGGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLN 105
+++R ++ + GG G + R+ LL + ++LDCP+CY L
Sbjct: 11 SLDRPKRQRPVSMENVGGTASGSEVARSATLL-------------ELDLLDCPICYHKLG 57
Query: 106 IPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEK 165
P+YQC NGH+ C CC + KCP C L G RS +EK++E++ V+C NA YGC EK
Sbjct: 58 APIYQCDNGHIACSSCCKKVKYKCPYCSLRIGFFRSRILEKIVEAVVVSCPNAKYGCTEK 117
Query: 166 MSYSEKYD--HGRACHYTPCSCPLAACNFVGSFHQIYQHFRGVHKHAAEEFV---YDKVL 220
+ Y + + H R C +T C CP C + G + +Y+H+ HK F Y+
Sbjct: 118 IPYDNESESAHERVCEFTLCYCPEPECKYTGVYTDLYRHYHAEHKTDHSWFKCGEYNNAW 177
Query: 221 RITLSVHHDLIILQEEKNGDLFILNNSTEPDGYRISVNCIAPSCKGGVVYS--IVAKSGG 278
++LQE ++G L ++ S E G ++VNCIAP G +S ++ ++G
Sbjct: 178 LHVTGEKLSFLVLQEYEDGPLVVVQCSMESHGICVTVNCIAPCAPGVGEFSCHLIYRNGS 237
Query: 279 AVYEFNS 285
F S
Sbjct: 238 EKITFES 244
>sp|Q9FM14|SIL11_ARATH E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana
GN=At5g62800 PE=2 SV=2
Length = 314
Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 111/191 (58%), Gaps = 7/191 (3%)
Query: 78 KHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPS--CRLP 135
+ N + L D +VLDCPVC+EPL IP +QC +GH+VC+ C + NKCP C LP
Sbjct: 24 QRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLP 83
Query: 136 NGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNFVGS 195
G+ R AME+V+ES V C+N ++GC + +SY + H + C+Y+ CSCP CN+ GS
Sbjct: 84 IGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGS 143
Query: 196 FHQIYQHFRGVHKH----AAEEFVYDKVLRITLSVHHDLIILQEEKNGDLFILNNSTEPD 251
++ IY HF H + + ++ Y V + +++ + +L E + LF++ E
Sbjct: 144 YNIIYGHFMRRHLYNSTIVSSKWGYSTV-DVLINIKEKVSVLWESRQKLLFVVQCFKERH 202
Query: 252 GYRISVNCIAP 262
G ++V IAP
Sbjct: 203 GVYVTVRRIAP 213
>sp|Q9FKD5|SINL9_ARATH Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis
thaliana GN=At5g37910 PE=3 SV=1
Length = 276
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 121/253 (47%), Gaps = 22/253 (8%)
Query: 56 TRATDSGGGGGGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGH 115
+ A S G GG R + L D ++LDCP+C E L P++QC NGH
Sbjct: 7 SEALISQGDGGERVAKRQRS----------AIVLLDLDILDCPICCEALTSPIFQCDNGH 56
Query: 116 VVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYDHG 175
+ C CC L NKCP+C LP GHSRS AME V+ESI + C N +GC + Y ++ H
Sbjct: 57 LACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAHE 116
Query: 176 RACHYTPCSCPLAACNFVGSFHQIYQHFRGVHK----HAAEEFVYDKVLRITLSVHHDLI 231
+ C ++ CSCP + C++ GS+ +Y H++ H + F ++ + ++
Sbjct: 117 KECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHSTNIFWNIKRFRCANFFTTSMLISDKIL 176
Query: 232 ILQEEKNGDLFILNNSTEPDGYRISVNCIAPSCK--GGVVYSIVAKSGGAVYEFNS---- 285
I + + L + EP G ++V+ IAPS G Y + G + S
Sbjct: 177 IKRVHEKKLLLAVQCFREPCGVYVTVSFIAPSAPEVGEFSYQLSYNVDGHTVTYESPEVK 236
Query: 286 --CTKSIQNWDEN 296
C SI+ EN
Sbjct: 237 RVCKVSIETPQEN 249
>sp|Q7XA77|SINL5_ARATH E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana
GN=At1g66660 PE=2 SV=2
Length = 328
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 87 VTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEK 146
V L +VLDCP C EPL P+YQC NGH+ C CC L KC CR G R AMEK
Sbjct: 76 VKLQSSDVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEK 135
Query: 147 VIESIQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNFVGSFHQIYQHFRGV 206
VIE+ V C NA +GCKE +Y + H + C + CSCP++ CN+V S+ + H
Sbjct: 136 VIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPVSNCNYVSSYSNLKSHACST 195
Query: 207 HKHAAE-----EFVYDKVLRITLSV-HHDLIILQEEKNGDLFILNNSTEPDGYRISVNCI 260
E + V D+ +++ ++ +EEK GDL ++ +G ++VN I
Sbjct: 196 AHVWGEDDIHFQLVIDRPRIFNMNLGRKKTVVFKEEKEGDLIVVQAFKGLEGVYVTVNRI 255
Query: 261 A 261
A
Sbjct: 256 A 256
>sp|Q9FKD6|SINL8_ARATH E3 ubiquitin-protein ligase SINA-like 8 OS=Arabidopsis thaliana
GN=At5g37900 PE=1 SV=2
Length = 263
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 86 TVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAME 145
+ TL D ++LDCP+C E L P++QC NGH+ C CC L NKCP+C ME
Sbjct: 24 SATLLDLDILDCPICCEGLTCPIFQCENGHLACSSCCPKLRNKCPAC----------PME 73
Query: 146 KVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNFVGSFHQIYQHFRG 205
++ESI V C N +GC E Y +K H C ++ CSCP C + G + +Y H++
Sbjct: 74 NILESILVTCPNDMFGCTESFLYGKKSTHEEECIFSLCSCPSLDCEYSGRYEDLYDHYKL 133
Query: 206 VH----KHAAEEFVYDKVLRITLSVHHDLIILQEEKNGDLFILNNSTEPDGYRISVNCIA 261
H F + + + + I + + LF + E G ++V+CIA
Sbjct: 134 THISNSYWTTNCFRSSIPYKAPMLISDKIQITRVYEKKILFAVQCFRESCGVYVTVSCIA 193
Query: 262 PS 263
PS
Sbjct: 194 PS 195
>sp|P21461|SINA_DROME E3 ubiquitin-protein ligase sina OS=Drosophila melanogaster GN=sina
PE=1 SV=2
Length = 314
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 33/192 (17%)
Query: 66 GGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDL 125
GGG + DL F +CPVC++ + P+ QC +GH+VC C L
Sbjct: 57 GGGDAGMSADLTSLF---------------ECPVCFDYVLPPILQCSSGHLVCVSCRSKL 101
Query: 126 MNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP--C 183
CP+CR P + R+ AMEKV +++ C+++ YGC + Y+EK +H C P C
Sbjct: 102 -TCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLC 160
Query: 184 SCPLAACNFVGSFHQIYQHFRGVHKHAA----EEFVY-----------DKVLRITLSVHH 228
CP A+C + G + QH HK E+ V+ D V+ + HH
Sbjct: 161 PCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHH 220
Query: 229 DLIILQEEKNGD 240
+++L++++ D
Sbjct: 221 FMLVLEKQEKYD 232
>sp|P61093|SINA_DROER E3 ubiquitin-protein ligase sina OS=Drosophila erecta GN=sina PE=3
SV=1
Length = 314
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 33/192 (17%)
Query: 66 GGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDL 125
GGG + DL F +CPVC++ + P+ QC +GH+VC C L
Sbjct: 57 GGGDAGMSADLTSLF---------------ECPVCFDYVLPPILQCSSGHLVCVSCRSKL 101
Query: 126 MNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP--C 183
CP+CR P + R+ AMEKV +++ C+++ YGC + Y+EK +H C P C
Sbjct: 102 -TCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLC 160
Query: 184 SCPLAACNFVGSFHQIYQHFRGVHKHAA----EEFVY-----------DKVLRITLSVHH 228
CP A+C + G + QH HK E+ V+ D V+ + HH
Sbjct: 161 PCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHH 220
Query: 229 DLIILQEEKNGD 240
+++L++++ D
Sbjct: 221 FMLVLEKQEKYD 232
>sp|Q84JL3|SINA3_ARATH E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana
GN=SINAT3 PE=2 SV=1
Length = 326
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 82 NGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRS 141
+G + T + E+L+CPVC + P++QC NGH +C C + N+CP+CR G R
Sbjct: 48 SGLLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRC 107
Query: 142 TAMEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAA--CNFVGSFHQI 199
A+EKV ES+++ C++ GC E Y K H C++ P SCP A C+ G +
Sbjct: 108 LALEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFL 167
Query: 200 YQHFRGVHK 208
H R HK
Sbjct: 168 VAHLRDDHK 176
>sp|Q9STN8|SINA4_ARATH E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana
GN=SINAT4 PE=2 SV=1
Length = 327
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 93 EVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQ 152
E+L+CPVC + P++QC NGH +C C + N+CP+CR G R A+EKV ES++
Sbjct: 60 ELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLE 119
Query: 153 VACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAA--CNFVGSFHQIYQHFRGVHK-- 208
+ C+ + GC E Y K H C++ P SCP A C VG + H R HK
Sbjct: 120 LPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVD 179
Query: 209 -HAAEEF 214
HA F
Sbjct: 180 MHAGSTF 186
>sp|Q8I147|SINA_DROWI E3 ubiquitin-protein ligase sina OS=Drosophila willistoni GN=sina
PE=3 SV=1
Length = 331
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQV 153
+ +CPVC++ + P+ QC +GH+VC C L CP+CR P + R+ AMEKV +++
Sbjct: 87 LFECPVCFDYVLPPILQCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVASNVKF 145
Query: 154 ACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQHFRGVHKHAA 211
C+++ YGC + Y+EK +H C P C CP A+C + G + QH HK
Sbjct: 146 PCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSIT 205
Query: 212 ----EEFVY-----------DKVLRITLSVHHDLIILQEEKNGD 240
E+ V+ D V+ + HH +++L++++ D
Sbjct: 206 TLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYD 249
>sp|P29304|SINA_DROVI E3 ubiquitin-protein ligase sina OS=Drosophila virilis GN=sina PE=3
SV=1
Length = 314
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 33/192 (17%)
Query: 66 GGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDL 125
GGG + DL F +CPVC++ + P+ QC +GH+VC C L
Sbjct: 57 GGGDAGMSADLTSLF---------------ECPVCFDYVLPPILQCSSGHLVCVSCRSKL 101
Query: 126 MNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP--C 183
CP+CR P + R+ AME+V +++ C+++ YGC + Y+EK +H C P C
Sbjct: 102 -TCCPTCRGPLANIRNLAMEEVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLC 160
Query: 184 SCPLAACNFVGSFHQIYQHFRGVHKHAA----EEFVY-----------DKVLRITLSVHH 228
CP A+C + G + QH HK E+ V+ D V+ + HH
Sbjct: 161 PCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHH 220
Query: 229 DLIILQEEKNGD 240
+++L++++ D
Sbjct: 221 FMLVLEKQEKYD 232
>sp|Q9M2P4|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana
GN=SINAT2 PE=2 SV=1
Length = 308
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 57 RATDSGGGGGGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHV 116
+ T G G G G H NNG E+L+CPVC + P++QC NGH
Sbjct: 34 KPTKPGSAGIGKYG-------IHSNNGVY-------ELLECPVCTNLMYPPIHQCPNGHT 79
Query: 117 VCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYDHGR 176
+C C + N CP+CR G+ R A+EKV ES++V C + GC + Y K H +
Sbjct: 80 LCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQ 139
Query: 177 ACHYTPCSCPLAA--CNFVGSFHQIYQHFRGVHK 208
C + P +CP A C+ G + H + HK
Sbjct: 140 HCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHK 173
>sp|P93748|SINA1_ARATH Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana
GN=SINAT1 PE=3 SV=1
Length = 305
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 93 EVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQ 152
E+L+CPVC + P++QC NGH +C C + N CP+CR G+ R A+EKV ES++
Sbjct: 53 ELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLE 112
Query: 153 VACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAA--CNFVGSFHQIYQHFRGVHK 208
V C + GC++ Y K H + C + SCP A C+ G + H + HK
Sbjct: 113 VPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHK 170
>sp|Q8IUQ4|SIAH1_HUMAN E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1
SV=2
Length = 282
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 85 VTVTLND-PEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTA 143
T + ND + +CPVC++ + P+ QC +GH+VC C L CP+CR P G R+ A
Sbjct: 28 TTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLA 86
Query: 144 MEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQ 201
MEKV S+ C+ A GC+ + ++EK DH C + P C CP A+C + GS +
Sbjct: 87 MEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMP 146
Query: 202 HFRGVHKHAA----EEFVY-----------DKVLRITLSVHHDLIILQEEKNGD 240
H HK E+ V+ D V+ + H +++L++++ D
Sbjct: 147 HLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYD 200
>sp|Q8S3N1|SINA5_ARATH E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana
GN=SINAT5 PE=1 SV=2
Length = 309
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 93 EVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQ 152
E+L+CPVC + P++QC NGH +C C + N+CP+CR G R A+EKV ES++
Sbjct: 42 ELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLE 101
Query: 153 VACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAA--CNFVGSFHQIYQHFRGVHK 208
+ C+ + GC Y K H C++ P SCP A C VG + H R HK
Sbjct: 102 LPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHK 159
>sp|Q920M9|SIAH1_RAT E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1
PE=1 SV=2
Length = 282
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 85 VTVTLND-PEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTA 143
T + ND + +CPVC++ + P+ QC +GH+VC C L CP+CR P G R+ A
Sbjct: 28 TTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLA 86
Query: 144 MEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQ 201
MEKV S+ C+ A GC+ + ++EK +H C + P C CP A+C + GS +
Sbjct: 87 MEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMP 146
Query: 202 HFRGVHKHAA----EEFVY-----------DKVLRITLSVHHDLIILQEEKNGD 240
H HK E+ V+ D V+ + H +++L++++ D
Sbjct: 147 HLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYD 200
>sp|P61092|SIA1A_MOUSE E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1
SV=1
Length = 282
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 85 VTVTLND-PEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTA 143
T + ND + +CPVC++ + P+ QC +GH+VC C L CP+CR P G R+ A
Sbjct: 28 TTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLA 86
Query: 144 MEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQ 201
MEKV S+ C+ A GC+ + ++EK +H C + P C CP A+C + GS +
Sbjct: 87 MEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMP 146
Query: 202 HFRGVHKHAA----EEFVY-----------DKVLRITLSVHHDLIILQEEKNGD 240
H HK E+ V+ D V+ + H +++L++++ D
Sbjct: 147 HLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYD 200
>sp|Q8T3Y0|SINAL_DROME Probable E3 ubiquitin-protein ligase sinah OS=Drosophila
melanogaster GN=sinah PE=1 SV=2
Length = 351
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 40 EEEEVPTVERQAPEQETRATDSGGGGGGGKGNRTGDLLKH---FNNGPVTVTLNDPE--- 93
E V V+RQ+P D+ G R + GP+ T +
Sbjct: 47 ETTHVVVVKRQSP-------DAAAAGELVPSRRKDSVAVQSGIVATGPLDTTRSGARDDF 99
Query: 94 ---VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIES 150
+L+CPVC+ + P+ QC GH++C C L CP CR+ + RS AMEKV
Sbjct: 100 LMALLECPVCFGYIMPPIMQCPRGHLICSTCRSKL-TICPVCRVFMTNIRSLAMEKVASK 158
Query: 151 IQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLA--ACNFVGSFHQIYQHFRGVHK 208
+ C+++ +GC+ ++SY+EK H C P CP C++ G +YQH H+
Sbjct: 159 LIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHE 218
Query: 209 HA 210
+
Sbjct: 219 NV 220
>sp|Q7ZVG6|SIAH1_DANRE E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2
Length = 282
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQV 153
+ +CPVC++ + P+ QC +GH+VC C L CP+CR P G R+ AMEKV S+
Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLF 96
Query: 154 ACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQHFRGVHKHAA 211
C+ A GC+ + +++K +H C + P C CP A+C + GS + H HK
Sbjct: 97 PCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLLHQHKSIT 156
Query: 212 ----EEFVY-----------DKVLRITLSVHHDLIILQEEKNGD 240
E+ V+ D V+ + H +++L++++ D
Sbjct: 157 TLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYD 200
>sp|Q86MW9|SINA_SCHMA E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA
PE=1 SV=1
Length = 371
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 64 GGGGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCC 123
G + ++L H + ++ L + +CPVC + P+ QC +GH+VC C
Sbjct: 95 GSMSSASDTVCNILPHNTSDSSSIDL--ASLFECPVCMDYALPPIMQCQSGHIVCASCRS 152
Query: 124 DLMNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP- 182
L + CP+CR + R+ AMEK+ S+ C+ + GC E Y+ K +H AC Y P
Sbjct: 153 KL-SSCPTCRGNLDNIRNLAMEKLASSVLFPCKYSTSGCPETFHYTSKSEHEAACEYRPY 211
Query: 183 -CSCPLAACNFVGSFHQIYQHFRGVHKHAA------EEFVYDKVLRITLSVHHDLIILQ 234
C CP A+C ++G Q+ H VH H + E+ V+ I+L D +++Q
Sbjct: 212 DCPCPGASCKWLGELEQVMPHL--VHHHKSITTLQGEDIVF-LATDISLPGAVDWVMMQ 267
>sp|A8X679|SIAH1_CAEBR E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis briggsae
GN=siah-1 PE=3 SV=2
Length = 434
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKVIESIQV 153
V +CPVC E + P QC +GH+VC C L CP+CR P R+ +EK+ +++
Sbjct: 168 VFECPVCLEYMLPPYMQCPSGHLVCSNCRPKL-QCCPTCRGPTPSVRNLGLEKIANTVRF 226
Query: 154 ACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQHFRGVHKHAA 211
C+ ++ GC + +K DH C Y P C CP A+C + G+ + H + VHK
Sbjct: 227 PCKFSNSGCPLNFHHIDKMDHEELCEYRPYSCPCPGASCKWQGALADVMDHLKKVHKSIT 286
Query: 212 ----EEFVYDKVLRITLSVHHDLIILQ 234
E+ V+ I L D +++Q
Sbjct: 287 TLQGEDIVF-LATDINLPGAVDWVMMQ 312
>sp|Q965X6|SIAH1_CAEEL E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis elegans
GN=siah-1 PE=1 SV=3
Length = 419
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 23/177 (12%)
Query: 64 GGGGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCC 123
GGGG + + ++L V +CPVC E + P QC +GH+VC C
Sbjct: 138 GGGGATDDSSAEILS---------------VFECPVCLEYMLPPYMQCSSGHLVCSNCRP 182
Query: 124 DLMNKCPSCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP- 182
L CP+CR P R+ +EK+ +++ C+ + GC +++K +H C + P
Sbjct: 183 KL-QCCPTCRGPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRPY 241
Query: 183 -CSCPLAACNFVGSFHQIYQHFRGVHKHAA----EEFVYDKVLRITLSVHHDLIILQ 234
C CP A+C + G + +H + +HK E+ V+ I L D +++Q
Sbjct: 242 CCPCPGASCKWQGGLSDVMEHLKKIHKSITTLQGEDIVF-LATDINLPGAVDWVMMQ 297
>sp|Q7SYL3|SIAH2_DANRE E3 ubiquitin-protein ligase Siah2 OS=Danio rerio GN=siah2l PE=2
SV=2
Length = 331
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHS-RSTAMEKVIESIQ 152
+ +CPVC++ + P+ QC GH+VC++C L + CP+CR P S R+ AMEKV ++
Sbjct: 86 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKL-SCCPTCRGPLTPSIRNLAMEKVASTLP 144
Query: 153 VACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQHFRGVHKHA 210
C+ + GC + +SEK +H C + P C CP A+C + GS ++ H HK
Sbjct: 145 FPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHLMHAHKSI 204
Query: 211 A----EEFVY-----------DKVLRITLSVHHDLIILQEEKN 238
E+ V+ D V+ + HH +++L++++
Sbjct: 205 TTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK 247
>sp|Q06985|SIA1B_MOUSE E3 ubiquitin-protein ligase SIAH1B OS=Mus musculus GN=Siah1b PE=2
SV=2
Length = 282
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 85 VTVTLND-PEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTA 143
T + ND + +CPVC++ + P+ QC +GH+VC C L CP+CR P G R+ A
Sbjct: 28 TTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLA 86
Query: 144 MEKVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQ 201
+EKV S+ C+ + GC+ + +++K +H C + P C CP A+C + GS +
Sbjct: 87 VEKVANSVLFPCKYSASGCEITLPHTKKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMP 146
Query: 202 HFRGVHKHAA----EEFVY-----------DKVLRITLSVHHDLIILQEEKNGD 240
H HK E+ V+ D V+ + H +++L++++ D
Sbjct: 147 HLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYD 200
>sp|Q9I8X5|SIAH2_XENLA E3 ubiquitin-protein ligase siah2 OS=Xenopus laevis GN=siah2 PE=2
SV=1
Length = 313
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 19/162 (11%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHS-RSTAMEKVIESIQ 152
+ +CPVC++ + P+ QC GH+VC++C ++ CP+CR S R+ AMEKV ++
Sbjct: 66 LFECPVCFDYVLPPILQCQAGHLVCNQCR-QKLSCCPTCRASLTPSIRNLAMEKVASAVL 124
Query: 153 VACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQHFRGVHKHA 210
C+ A GC + ++EK +H C Y P C CP A+C + GS + QH HK
Sbjct: 125 FPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTHSHKSI 184
Query: 211 A----EEFVY-----------DKVLRITLSVHHDLIILQEEK 237
E+ V+ D V+ HH +++L++++
Sbjct: 185 TTLQGEDIVFLATDINLPGAVDWVMMQYCFNHHFMLVLEKQE 226
>sp|Q8R4T2|SIAH2_RAT E3 ubiquitin-protein ligase SIAH2 OS=Rattus norvegicus GN=Siah2
PE=1 SV=2
Length = 325
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 19/163 (11%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHS-RSTAMEKVIESIQ 152
+ +CPVC++ + P+ QC GH+VC++C ++ CP+CR S R+ AMEKV ++
Sbjct: 78 LFECPVCFDYVLPPILQCQAGHLVCNQCR-QKLSCCPTCRGALTPSIRNLAMEKVASAVL 136
Query: 153 VACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQHFRGVHKHA 210
C+ A GC + ++EK +H C Y P C CP A+C + GS + H HK
Sbjct: 137 FPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSI 196
Query: 211 A----EEFVY-----------DKVLRITLSVHHDLIILQEEKN 238
E+ V+ D V+ + HH +++L++++
Sbjct: 197 TTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK 239
>sp|Q06986|SIAH2_MOUSE E3 ubiquitin-protein ligase SIAH2 OS=Mus musculus GN=Siah2 PE=1
SV=2
Length = 325
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 19/163 (11%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHS-RSTAMEKVIESIQ 152
+ +CPVC++ + P+ QC GH+VC++C ++ CP+CR S R+ AMEKV ++
Sbjct: 78 LFECPVCFDYVLPPILQCQAGHLVCNQCR-QKLSCCPTCRGALTPSIRNLAMEKVASAVL 136
Query: 153 VACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQHFRGVHKHA 210
C+ A GC + ++EK +H C Y P C CP A+C + GS + H HK
Sbjct: 137 FPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSI 196
Query: 211 A----EEFVY-----------DKVLRITLSVHHDLIILQEEKN 238
E+ V+ D V+ + HH +++L++++
Sbjct: 197 TTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK 239
>sp|O43255|SIAH2_HUMAN E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1
SV=1
Length = 324
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 19/163 (11%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHS-RSTAMEKVIESIQ 152
+ +CPVC++ + P+ QC GH+VC++C ++ CP+CR S R+ AMEKV ++
Sbjct: 77 LFECPVCFDYVLPPILQCQAGHLVCNQCR-QKLSCCPTCRGALTPSIRNLAMEKVASAVL 135
Query: 153 VACENADYGCKEKMSYSEKYDHGRACHYTP--CSCPLAACNFVGSFHQIYQHFRGVHKHA 210
C+ A GC + ++EK +H C Y P C CP A+C + GS + H HK
Sbjct: 136 FPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSI 195
Query: 211 A----EEFVY-----------DKVLRITLSVHHDLIILQEEKN 238
E+ V+ D V+ + HH +++L++++
Sbjct: 196 TTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK 238
>sp|Q9C6H4|SINL1_ARATH E3 ubiquitin-protein ligase SINA-like 1 OS=Arabidopsis thaliana
GN=At1g66610 PE=2 SV=1
Length = 366
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 88 TLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKV 147
TL + ++LDCP+C L IP++QC GH+ C CC ++ NKCP C L G+ RS ME+V
Sbjct: 47 TLFELDLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIMERV 106
Query: 148 IESIQVAC 155
+E+ V C
Sbjct: 107 VEAFIVRC 114
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 88 TLNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNKCPSCRLPNGHSRSTAMEKV 147
TL+ ++LDCPVC + L I ++Q
Sbjct: 152 TLSQLDLLDCPVCSKALKISIFQ------------------------------------- 174
Query: 148 IESIQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNFVGSFHQIYQHFRGVH 207
+S+ +A GC E SY + H + C + C CP CN+ G + +Y H+ H
Sbjct: 175 -QSLFLA--KRQNGCTETFSYGNELVHEKKCSFALCYCPAPNCNYAGVYKDLYSHYAANH 231
Query: 208 KHAAEEFVYDKVLRITLSVHHDLIILQEEKNGDLFILNNSTE-PDGYRISVNCIAPSCK- 265
K F + + + ++LQ+ +G L +L E P G +VNCIAPS
Sbjct: 232 KKLWTRFSCGYSMHVCMDFESKSLVLQQYSDGPLVVLQCFKEPPQGLFWTVNCIAPSAPG 291
Query: 266 -GGVVYSIVAKSGGAVYEFNS 285
G Y + + G F S
Sbjct: 292 VGKFSYELSYSTAGNTLTFRS 312
>sp|Q557K0|Y3509_DICDI TNF receptor-associated factor family protein
DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum
GN=DDB_G0273433 PE=3 SV=1
Length = 450
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 29/151 (19%)
Query: 85 VTVTLNDPEVLDCPVCY--------EPLNIPVYQCGNGHVVCHRCC---CDLMNKCPSCR 133
+ V +D C +C+ E L+ V QC NGH+ CH C + +CPSC+
Sbjct: 14 IIVNSDDLTPFQCQICFNSVIDFKKETLSFDVLQCRNGHISCHECWNRQLSIKQECPSCK 73
Query: 134 ---LPNGHSRSTAMEKVIESIQVACENA-------------DYGCKEKMSYSEKYDHGRA 177
LP+ SR+ +E +++V C N + GC E + H +
Sbjct: 74 VKTLPSELSRNIFLENAFRALKVICPNKFKESKFQGEAVHCENGCPEILKVELLEHHLKE 133
Query: 178 CHYTPCSCPLAA--CNFVGSFHQIYQHFRGV 206
C Y CP + C ++ +QI H + V
Sbjct: 134 CQYQFIKCPNNSNKCKYIIRKNQIEHHNQSV 164
>sp|Q54FB9|Y0971_DICDI TNF receptor-associated factor family protein DDB_G0290971
OS=Dictyostelium discoideum GN=DDB_G0290971 PE=3 SV=1
Length = 445
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 34/140 (24%)
Query: 97 CPVCYEPL-----NIPVYQCGNGHVVCHRCCCD-LMNK--CPSCRLP----NGHSRSTAM 144
CP+C++ V+QC +GH+ C C D L+NK C CR P N SR+ +
Sbjct: 23 CPICFDLYYSSSSKKEVFQCRDGHLACKSCWSDSLLNKKECMICRTPVNSMNELSRNRFI 82
Query: 145 EKVIESIQVACENADY----------------------GCKEKMSYSEKYDHGRACHYTP 182
E +V C N+ + GCKE ++ H C +
Sbjct: 83 ENEFLKKKVYCPNSFFFIENVNVDDSSMNEALIRDESNGCKEIITVEALEKHQVECQFRF 142
Query: 183 CSCPLAACNFVGSFHQIYQH 202
CP C+ + QI +H
Sbjct: 143 EKCPFTGCDKILRLKQIAEH 162
>sp|Q1ZXR0|Y8444_DICDI TNF receptor-associated factor family protein DDB_G0268444
OS=Dictyostelium discoideum GN=DDB_G0268444 PE=2 SV=1
Length = 502
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 93 EVLDCPVCYEPL-NIPVYQCGNGHVVCHRCCCDLMNKCPSCRL-------PNGHSRSTAM 144
E C +CYE + +YQC H C C + + K C + + SR+ +
Sbjct: 24 EKYSCSICYESVYKKEIYQCKEIHWFCKTCWAESLFKKKECMICRCIVKSISELSRNRFI 83
Query: 145 EKVIESIQVACENA-----------------DYGCKEKMSYSEKYDHGRACHYTPCSCPL 187
E+ +I+V C N+ + GCK+ ++ E H + C +T C
Sbjct: 84 EQDFLNIKVNCPNSFKYIDENKNNNNKIKDLENGCKDIITIGEIEKHLKQCKFTHIKCKF 143
Query: 188 AACNFVGSFHQIYQH 202
CN + +Q+ +H
Sbjct: 144 IGCNKIIRLNQVEKH 158
>sp|Q2TAD9|CYR1B_XENLA Cysteine and histidine-rich protein 1-B OS=Xenopus laevis
GN=cyhr1-b PE=2 SV=2
Length = 365
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 70/192 (36%), Gaps = 44/192 (22%)
Query: 48 ERQAPEQETRATDSGGGGG--------GGKGNRTGDLLKHFNNGPVTVTLNDP------- 92
ER+AP A+ S G G GG G LL ++GP L
Sbjct: 4 EREAPG--PLASSSAGLGAEVGQEEVPGGAGPARLLLLPSDSDGPPKKRLRSEAEPGSVR 61
Query: 93 ------EVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLM---------NKCPSCRLPNG 137
VL C VC + VYQC NGH++C C L+ CP+CR
Sbjct: 62 LEERLYSVLCCAVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEIS 121
Query: 138 HS---RSTAMEKVIESIQVAC----ENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAAC 190
S R+ A+EK I + C + E+ E D C Y CP
Sbjct: 122 KSLCCRNLAVEKAISELPSDCGFCLKQFPRSLLERHKKEECQDRVTQCKYKRIGCP---- 177
Query: 191 NFVGSFHQIYQH 202
+ G +H++ H
Sbjct: 178 -WQGPYHELTVH 188
>sp|Q6GNX1|CYR1A_XENLA Cysteine and histidine-rich protein 1-A OS=Xenopus laevis
GN=cyhr1-a PE=2 SV=2
Length = 365
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 70/192 (36%), Gaps = 44/192 (22%)
Query: 48 ERQAPEQETRATDSGGGGG--------GGKGNRTGDLLKHFNNGPVTVTLNDP------- 92
ER+AP A+ S G G GG G LL ++GP L
Sbjct: 4 EREAPG--PLASSSAGLGAEVGQEEVPGGAGPARLLLLPSDSDGPPKKRLRSEAEPGSVR 61
Query: 93 ------EVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLM---------NKCPSCRLPNG 137
VL C VC + VYQC NGH++C C L+ CP+CR
Sbjct: 62 LEERLYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEIS 121
Query: 138 HS---RSTAMEKVIESIQVAC----ENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAAC 190
S R+ A+EK + + C + E+ E D C Y CP
Sbjct: 122 KSLCCRNLAVEKAVSELPSDCGFCLKQFPRSLLERHKKEECQDRVTQCKYKRIGCP---- 177
Query: 191 NFVGSFHQIYQH 202
+ G +H++ H
Sbjct: 178 -WEGPYHELTVH 188
>sp|Q08CH8|CYHR1_DANRE Cysteine and histidine-rich protein 1 OS=Danio rerio GN=cyhr1 PE=2
SV=1
Length = 375
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 27/128 (21%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLM---------NKCPSCRLPNGHS---RS 141
VL C VC + VYQC NGH++C C L+ CP+CR S R+
Sbjct: 79 VLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLCCRN 138
Query: 142 TAMEKVIESIQVACENADYGCKE-------KMSYSEKYDHGRACHYTPCSCPLAACNFVG 194
A+EK + + C Y K+ + E D C Y CP + G
Sbjct: 139 LAVEKAVSELPSEC---SYCLKQFPRSGLDRHQTEECQDRVTQCKYKRIGCP-----WQG 190
Query: 195 SFHQIYQH 202
FH++ H
Sbjct: 191 PFHELSAH 198
>sp|Q9VZV5|CYHR1_DROME Cysteine and histidine-rich protein 1 homolog OS=Drosophila
melanogaster GN=CG32486 PE=2 SV=2
Length = 412
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 19/127 (14%)
Query: 94 VLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLM---------NKCPSCRL---PNGHSRS 141
L C VC + +YQC GH++C C L+ CP+CR+ + SR+
Sbjct: 110 ALCCAVCLDLPKTAMYQCQMGHLMCAACFTHLLADGRLRDQIATCPNCRVEISKSTASRN 169
Query: 142 TAMEKVIESIQVACENADYGCKEKMSYSEKYDHGR-ACHYTPCSCPL--AACNFVGSFHQ 198
A+EK + C+ C ++ Y H + C P C C + G +H+
Sbjct: 170 LAVEKAASELPSECQ----FCNKEFPYKSLERHEQHECQERPTKCKYHRIGCQWRGPYHE 225
Query: 199 IYQHFRG 205
+H R
Sbjct: 226 TNEHERN 232
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 32/142 (22%)
Query: 77 LKHFNNGPVTVTLND--------PEVLDCPVCYEPL----NIPVYQCGNGHVVCHRCCCD 124
+ N P+ T+ND E +CP+C E + QC GHV C C
Sbjct: 5 ISQLNITPIKFTINDLIVDPVSLSENFNCPICEECIMDVNKCEALQCKEGHVHCRLCWMK 64
Query: 125 LM---NKCPSCRL----PNGHSRSTAMEKVIESIQVACENA-------------DYGCKE 164
+ +C +CR + S++ ++K + ++ C N +GCKE
Sbjct: 65 SLESKKECMTCRTRVNSVDSLSKNIYLQKEFRNKKIFCPNLFRILNSGKIEIDEKFGCKE 124
Query: 165 KMSYSEKYDHGRACHYTPCSCP 186
+ E H + C + CP
Sbjct: 125 ILKVDELEGHIKECQFQFIECP 146
>sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus GN=RNF151 PE=2 SV=1
Length = 240
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 97 CPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNK---CPSCRLPNGHSRST---AMEKVIES 150
C VC+ L PV + H+ C +C + + CP CR H + ++K+I
Sbjct: 20 CSVCHGVLKRPV-RLPCSHIFCKKCILRWLARQKTCPCCRKEVRHRKMVHVNKLQKIIGR 78
Query: 151 IQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNF 192
++V C NA+ GC+ + + H +C + CP C
Sbjct: 79 LEVKCRNAEAGCQVTCPLAHRKGHQDSCPFELMVCPNEGCML 120
>sp|Q7ZW16|RNF41_DANRE E3 ubiquitin-protein ligase NRDP1 OS=Danio rerio GN=rnf41 PE=2 SV=1
Length = 318
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 93 EVLDCPVCYEPLNIPVYQCGNGHVVCHRCCCDLMNK---CPSCR--LPNGHSRST--AME 145
E L CP+C L PV H C+ C + CP R + H R M
Sbjct: 14 EDLLCPICSGVLEEPVRAPHCEHAFCNACITQWFAQQQICPVDRTVVTLAHLRPVPRIMR 73
Query: 146 KVIESIQVACENADYGCKEKMSYSEKYDHGRACHYTP 182
++ +Q++C+NA +GC + + H + C + P
Sbjct: 74 NMLSKLQISCDNAGFGCTATLRLDQLQSHLKDCEHNP 110
>sp|Q55GA8|Y7744_DICDI TNF receptor-associated factor family protein DDB_G0267744
OS=Dictyostelium discoideum GN=DDB_G0267744 PE=3 SV=1
Length = 429
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 89 LNDPEVLDCPVCYEPLNIPVYQCGNGHVVCHRC---CCDLMNKCPSCRLP----NGHSRS 141
+ND + C +C L + +YQC GH C C +L +C +CR S++
Sbjct: 16 INDDFI--CVIC-SHLQVDIYQCVEGHFACKNCFLKMIELKKQCMTCRCEIKSIESLSKN 72
Query: 142 TAMEKVIESIQVACENA----------DYGCKEKMSYSEKYDHGRACHYTPCSCP 186
+EK + + + C N+ + CK+ ++ H + C +T CP
Sbjct: 73 RYLEKEVRKLNIYCPNSFSDLKNSIKDENACKDIITIEGLETHLKNCKFTLKECP 127
>sp|A7XUJ6|TRAF6_PIG TNF receptor-associated factor 6 OS=Sus scrofa GN=TRAF6 PE=2 SV=1
Length = 541
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 48/136 (35%), Gaps = 10/136 (7%)
Query: 58 ATDSGGGGGGGKGNRTGDLLKHFNNGPVTVTLNDPEVLDCPVCYEPLNIPVYQCGNGHVV 117
A D G G GN + ++ V +CP+C L V Q GH
Sbjct: 32 AKDDGVSGTASTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAV-QTPCGHRF 90
Query: 118 CHRCCC----DLMNKCP---SCRLPNGHSRSTAMEKVIESIQVACENADYGCKEKMSYSE 170
C C D +KCP L N ++ I S+ V C N GC KM
Sbjct: 91 CKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLTVKCPNV--GCLHKMELRH 148
Query: 171 KYDHGRACHYTPCSCP 186
DH C + +CP
Sbjct: 149 LEDHQAHCEFALMNCP 164
>sp|Q00940|PEX10_PICAN Peroxisome biogenesis factor 10 OS=Pichia angusta GN=PEX10 PE=3
SV=1
Length = 295
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 65 GGGGKGNRTGDLLKHFNNGPVTVT-LNDPEVL--------DCPVCYEPLNIPVYQCGN-G 114
G +GDL+ F + V L DP+VL C +C P+ P CG G
Sbjct: 204 GATKTVQDSGDLIYRFRDQTSDVIDLADPKVLPYLPEASRTCMLCLSPMKDP--SCGECG 261
Query: 115 HVVCHRCCCDLM---NKCPSCR 133
HV C +C D + +CP CR
Sbjct: 262 HVFCWKCVLDWVKERQECPLCR 283
>sp|Q9CQ29|RN151_MOUSE RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1
Length = 239
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 97 CPVCYEPLNIPVYQCGNGHVVCHRCCCDLM---NKCPSCRLPNGHSRST---AMEKVIES 150
C VC+ L P + H+ C +C + N CP CR + + K I
Sbjct: 20 CSVCHGVLKRPT-RLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEVNKLRKTIGR 78
Query: 151 IQVACENADYGCKEKMSYSEKYDHGRACHYTPCSCPLAACNF 192
+QV C+NA GC + + + +H +C + +CP C
Sbjct: 79 LQVKCKNAAAGCLDTHPLAHRKEHQDSCPFELMACPNEGCTV 120
>sp|Q86L54|Y2829_DICDI TNF receptor-associated factor family protein DDB_G0272829
OS=Dictyostelium discoideum GN=DDB_G0272829 PE=3 SV=1
Length = 530
Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 17/117 (14%)
Query: 103 PLNIPVYQCGNGHVVCHRC---CCDLMNKCPSCRLP----NGHSRSTAMEKVI-ESIQVA 154
P + QC NGH C C ++ ++CP+CR+ N S + + K I ESI++
Sbjct: 48 PNRMKALQCINGHCFCLTCWESILEIKSECPTCRIQIQSMNTLSNNLFIIKSISESIKIH 107
Query: 155 C--------ENADYGCKEKMSYSEKYDHGRACHYTPCSCPL-AACNFVGSFHQIYQH 202
C N GCKE ++ E H C + C + CN + F++ +H
Sbjct: 108 CPNYLNFDNSNNFNGCKEIITIDEIDRHESKCEFRFIKCSINNQCNEIIRFNERDKH 164
>sp|Q55A66|Y2098_DICDI TNF receptor-associated factor family protein DDB_G0272098
OS=Dictyostelium discoideum GN=DDB_G0272098 PE=3 SV=1
Length = 1084
Score = 39.3 bits (90), Expect = 0.045, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 25/114 (21%)
Query: 97 CPVC-------YEPLNIPVYQCGNGHVVCHRCC---CDLMNKCPSCRLPNGHSRSTAME- 145
CP C + P QC NGH C +C L C C++P + ++
Sbjct: 21 CPDCGELLINNFNPEKFKALQCKNGHTKCLQCWEQHLKLRKNCLQCKVPVSSIKDLSLNL 80
Query: 146 ---KVIESIQVACENADY-----------GCKEKMSYSEKYDHGRACHYTPCSC 185
+ I + +V C+N Y GCKE + E H + C T C
Sbjct: 81 YIAQKISANKVYCKNRYYETKNFTIDEENGCKEIIRVDEYEKHIKECPLTYTDC 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,161,597
Number of Sequences: 539616
Number of extensions: 6416996
Number of successful extensions: 30298
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 29800
Number of HSP's gapped (non-prelim): 508
length of query: 328
length of database: 191,569,459
effective HSP length: 118
effective length of query: 210
effective length of database: 127,894,771
effective search space: 26857901910
effective search space used: 26857901910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)