BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020294
(328 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LEW8|FN3KR_ARATH Protein-ribulosamine 3-kinase, chloroplastic OS=Arabidopsis
thaliana GN=At3g61080 PE=1 SV=2
Length = 326
Score = 534 bits (1375), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/307 (82%), Positives = 276/307 (89%), Gaps = 1/307 (0%)
Query: 23 SFSKRRTF-AMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 81
+FS R F AMAA+S+DPIREWIL+EGKAT ITKI VGGGCINLAS Y TDAGSFFVKT
Sbjct: 20 NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79
Query: 82 NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 141
NRSIGP+MFEGEALGL AMYETRTIR P P K G LPTGGSYIIMEFI+FG SRGNQ+
Sbjct: 80 NRSIGPAMFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYIIMEFIDFGGSRGNQAEL 139
Query: 142 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 201
G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct: 140 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 199
Query: 202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 261
S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+
Sbjct: 200 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPACYYGHNEAD 259
Query: 262 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 321
FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDD
Sbjct: 260 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 319
Query: 322 YLRMLKV 328
YLRMLK
Sbjct: 320 YLRMLKA 326
>sp|A2XBT1|FN3KR_ORYSI Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp.
indica GN=OsI_09747 PE=3 SV=1
Length = 342
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/301 (77%), Positives = 264/301 (87%)
Query: 28 RTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP 87
R MAAL +DPIR+WIL+EGKAT IT + +GGGCIN A Y TDAGSFFVKTN IGP
Sbjct: 42 RLSIMAALGEDPIRQWILTEGKATKITGVSSIGGGCINSAQCYKTDAGSFFVKTNGRIGP 101
Query: 88 SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAE 147
SMFEGEALGL AMY+T +IR P P+KVG+LPTGGS+IIMEFIEFG SRG+QS G+KLAE
Sbjct: 102 SMFEGEALGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALGRKLAE 161
Query: 148 MHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 207
MHKA KS KG+GF VDNTIGSTPQIN WT++WIEFY++HRLG+QL+L ++GDS IY +
Sbjct: 162 MHKAAKSDKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDSAIYDK 221
Query: 208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 267
G RL++N+ PLFEG +EPCLLHGDLWSGNISSD +GEPVILDPACYYGHNEAEFGMSWC
Sbjct: 222 GQRLIENMHPLFEGAVMEPCLLHGDLWSGNISSDTDGEPVILDPACYYGHNEAEFGMSWC 281
Query: 268 AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK 327
AGFGG FY+SYFEVMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRMLK
Sbjct: 282 AGFGGEFYSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLK 341
Query: 328 V 328
Sbjct: 342 A 342
>sp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os03g0117800 PE=2 SV=1
Length = 342
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/301 (77%), Positives = 263/301 (87%)
Query: 28 RTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP 87
R MAAL +DPIR+WIL+EGKAT IT + +GGGCIN A Y TDA SFFVKTN IGP
Sbjct: 42 RLSIMAALGEDPIRQWILTEGKATKITGVSSIGGGCINSAQCYKTDASSFFVKTNGRIGP 101
Query: 88 SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAE 147
SMFEGEALGL AMY+T +IR P P+KVG+LPTGGS+IIMEFIEFG SRG+QS G+KLAE
Sbjct: 102 SMFEGEALGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALGRKLAE 161
Query: 148 MHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 207
MHKA KS KG+GF VDNTIGSTPQIN WT++WIEFY++HRLG+QL+L ++GDS IY +
Sbjct: 162 MHKAAKSDKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDSAIYDK 221
Query: 208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 267
G RL++N+ PLFEG +EPCLLHGDLWSGNISSD NGEPVILDPACYYGHNEAEFGMSWC
Sbjct: 222 GQRLIENMHPLFEGAVMEPCLLHGDLWSGNISSDTNGEPVILDPACYYGHNEAEFGMSWC 281
Query: 268 AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK 327
AGFGG FY+SYFEVMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRMLK
Sbjct: 282 AGFGGEFYSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLK 341
Query: 328 V 328
Sbjct: 342 A 342
>sp|Q8K274|KT3K_MOUSE Ketosamine-3-kinase OS=Mus musculus GN=Fn3krp PE=2 SV=2
Length = 309
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 161/285 (56%), Gaps = 26/285 (9%)
Query: 60 GGGCINLASRYGTDAGSFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
GGGCI+ Y TD G FVK N ++ MFEGE L A+ +T T++ P+P KV P
Sbjct: 21 GGGCISQGQSYDTDKGRVFVKVNSKAEARRMFEGEMASLTAILKTGTVKVPKPIKVVDAP 80
Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSSKG--------- 157
GGS ++ME ++ + + G +LA++H +AG KG
Sbjct: 81 GGGSMLVMEHLDMRYLSSHATKLGTQLADLHLENKRLGERLLKEAGTVGKGGEQAERQYV 140
Query: 158 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 215
FGFDV G PQ+N W NW+EFYA R+ Q+ + + GD + L +
Sbjct: 141 DQFGFDVVTCCGYLPQVNDWQKNWVEFYARQRIQPQMDMVEKKSGDREALELWSALQLKI 200
Query: 216 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSF 274
LF + + P LLHGDLW GN++ D +G P+I DPA +YGH+E E ++ GF SF
Sbjct: 201 PDLFRDLEIVPALLHGDLWGGNVAEDSSG-PIIFDPASFYGHSEYELAIAGMFGGFSSSF 259
Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSII 319
Y++Y +PK PGFEKR LY L+HYLNH+N FGSGYR S+L+I+
Sbjct: 260 YSAYHSKIPKTPGFEKRLQLYQLFHYLNHWNHFGSGYRGSSLNIM 304
>sp|Q9HA64|KT3K_HUMAN Ketosamine-3-kinase OS=Homo sapiens GN=FN3KRP PE=1 SV=2
Length = 309
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 163/290 (56%), Gaps = 26/290 (8%)
Query: 60 GGGCINLASRYGTDAGSFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
GGGCI+ Y TD G FVK N ++ MFEGE L A+ +T T++ P+P KV P
Sbjct: 21 GGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLTAILKTNTVKVPKPIKVLDAP 80
Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSSKG--------- 157
GGS ++ME ++ + + G +LA++H +AG +G
Sbjct: 81 GGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFV 140
Query: 158 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 215
FGFDV G PQ+N W +W+ FYA R+ Q+ + + GD Q L +
Sbjct: 141 ARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMVEKESGDREALQLWSALQLKI 200
Query: 216 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSF 274
LF + + P LLHGDLW GN++ D +G PVI DPA +YGH+E E ++ GF SF
Sbjct: 201 PDLFRDLEIIPALLHGDLWGGNVAEDSSG-PVIFDPASFYGHSEYELAIAGMFGGFSSSF 259
Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324
Y++Y +PK PGFEKR LY L+HYLNH+N FGSGYR S+L+I+ + ++
Sbjct: 260 YSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSSLNIMRNLVK 309
>sp|P74594|Y1563_SYNY3 Uncharacterized protein slr1563 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1563 PE=3 SV=1
Length = 295
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 174/288 (60%), Gaps = 19/288 (6%)
Query: 46 SEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRT 105
+ G+ I + V GGCIN +FVK N++ MF+ EALGL AM T+T
Sbjct: 19 TTGQPFRIQERRSVSGGCINQGYCLVDGEQKYFVKLNQAQQWQMFQAEALGLEAMAATQT 78
Query: 106 IRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF---GKKLAEMHKAGKSSKGFGFDV 162
IR PRP G+ G SY+++E++EFG RGN + G+ LA +H+AG S++ FG+
Sbjct: 79 IRVPRPICHGS-SAGHSYLVLEWLEFG--RGNHDSWYRMGQNLAALHQAGGSAQ-FGWQT 134
Query: 163 DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD----STIYQRGHRLMKNLAPL 218
DNTIG+TPQ N WT +W +F+AEHRLGYQL LA + G+ + + + +L+ + P
Sbjct: 135 DNTIGATPQPNPWTDSWADFFAEHRLGYQLALARRRAGNFPDPAVVVPKVKQLLGDRQP- 193
Query: 219 FEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNS 277
P L+HGDLWSGN + GEPVILDPA YYG E + M+ GF +FY
Sbjct: 194 ------TPALVHGDLWSGNGAILTTGEPVILDPATYYGDGEVDLAMTELFGGFPAAFYQG 247
Query: 278 YFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM 325
Y + P +PG+++R+ LY LYH LNH+NLFG GY+ A ++ LR+
Sbjct: 248 YHSISPAEPGYQQRKILYNLYHILNHFNLFGGGYQQQAQQMLKQCLRI 295
>sp|Q9ER35|FN3K_MOUSE Fructosamine-3-kinase OS=Mus musculus GN=Fn3k PE=2 SV=1
Length = 309
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 157/290 (54%), Gaps = 26/290 (8%)
Query: 60 GGGCINLASRYGTDAGSFFVKTNR-SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
GGGCI+ Y TD+G FVK NR + MFEGE L A+ T +R P+P KV LP
Sbjct: 21 GGGCISEGYAYYTDSGPVFVKVNRRTQARQMFEGEMASLEALRNTGLVRVPKPMKVIDLP 80
Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH----------KAGKSSKG----------- 157
GG+ +ME ++ S S G+++A++H K +++ G
Sbjct: 81 GGGAVFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREKSKTRQNTVGCGAEGAEPQGV 140
Query: 158 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 215
FGF G PQ+N+W +W F+ HRL QL L Y D + RL +
Sbjct: 141 TKFGFHTVTCCGFIPQVNEWQEDWPTFFTRHRLQAQLDLIEKDYADRETQELWSRLQVKI 200
Query: 216 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSF 274
LF G+ + P LLHGDLWSGN++ D G PVI DPA +YGH+E E + S GF SF
Sbjct: 201 PDLFAGIEIVPALLHGDLWSGNVAEDDQG-PVIYDPASFYGHSEFELAIASMFGGFPRSF 259
Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324
+ +Y +PK PGF+KR LY L++YLNH+N FG YRS +L ++ LR
Sbjct: 260 FTAYHRKIPKAPGFDKRLLLYQLFNYLNHWNHFGREYRSPSLGVMRKLLR 309
>sp|Q9H479|FN3K_HUMAN Fructosamine-3-kinase OS=Homo sapiens GN=FN3K PE=1 SV=1
Length = 309
Score = 208 bits (530), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 155/290 (53%), Gaps = 26/290 (8%)
Query: 60 GGGCINLASRYGTDAGSFFVKTNR-SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
G GCI+ Y TDAG FVK NR + MFEGE L A+ T +R PRP KV LP
Sbjct: 21 GAGCISEGRAYDTDAGPVFVKVNRRTQARQMFEGEVASLEALRSTGLVRVPRPMKVIDLP 80
Query: 119 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH---------------KAGKSSKG------ 157
GG+ +ME ++ S S G+++A++H G+ +G
Sbjct: 81 GGGAAFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREKLKEEENTVGRRGEGAEPQYV 140
Query: 158 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 215
FGF G PQ+N+W +W F+A HRL QL L Y D + RL +
Sbjct: 141 DKFGFHTVTCCGFIPQVNEWQDDWPTFFARHRLQAQLDLIEKDYADREARELWSRLQVKI 200
Query: 216 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSF 274
LF G+ + P LLHGDLWSGN++ D G P+I DPA +YGH+E E ++ GF SF
Sbjct: 201 PDLFCGLEIVPALLHGDLWSGNVAEDDVG-PIIYDPASFYGHSEFELAIALMFGGFPRSF 259
Query: 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324
+ +Y +PK PGF++R LY L++YLNH+N FG YRS +L + L+
Sbjct: 260 FTAYHRKIPKAPGFDQRLLLYQLFNYLNHWNHFGREYRSPSLGTMRRLLK 309
>sp|Q9KRU5|Y1539_VIBCH Uncharacterized protein VC_1539 OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=VC_1539
PE=3 SV=1
Length = 288
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 19/288 (6%)
Query: 45 LSE--GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYE 102
LSE GK H+ + V GG IN +FVKTN+ + F E L M E
Sbjct: 9 LSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEVENLRVMRE 68
Query: 103 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSV--FGKKLAEMHKAGKSSKGFGF 160
+ T++ P G T +Y+++ ++ + FG +LA +H+ G+ K FGF
Sbjct: 69 SNTVQVPEYILHGTSKTH-AYLVLNYLATKPLDDAERSYEFGVQLANLHRWGEQ-KEFGF 126
Query: 161 DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMK----NLA 216
D+DN IG+T Q N W W F+AE R+G+QL+L ++ + T ++K N +
Sbjct: 127 DIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQLMQEKGVNLTNINEFVEMVKTRLANHS 186
Query: 217 PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFY 275
P P LLHGDLW GN+++ NG P+ DPACY+G E + ++ W GF F+
Sbjct: 187 P-------RPSLLHGDLWFGNVANIVNG-PLCFDPACYWGDRECDIALAEWFGGFQPEFF 238
Query: 276 NSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 323
Y V P G+E+R+D+Y LYH LNHYN FG Y A +I+ L
Sbjct: 239 QGYESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKIL 286
>sp|Q87PM1|Y1481_VIBPA Uncharacterized protein VP1481 OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=VP1481 PE=3 SV=1
Length = 288
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 143/281 (50%), Gaps = 27/281 (9%)
Query: 52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRP 111
IT+ + GG I+ + +FVK N FE EA L + ET TI P
Sbjct: 18 QITEKVRLSGGDISESYMINDGEQRYFVKINDREFLHKFEVEAESLHLLRETSTIFVPEV 77
Query: 112 FKVGALPTGGSYIIMEFIEFG--SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST 169
VG ++II+ ++ N FG++LA++H+ G+ K FGFD DN +GST
Sbjct: 78 VLVGK-TKNNAFIILNYLPTKPLDDPENSFKFGQQLAQLHQWGEQ-KEFGFDTDNYLGST 135
Query: 170 PQINKWTSNWIEFYAEHRLGYQLKLA---------LDQYGDSTIYQRGHRLMKNLAPLFE 220
Q N+W W F+AE R+G+QL+L +D + D +L+ N P
Sbjct: 136 LQPNQWHKKWCMFFAEQRIGWQLQLLKEKGVTLVDIDDFIDVV-----KQLLANHTP--- 187
Query: 221 GVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYF 279
EP LLHGDLW+GN++ G P+ DPACY+G E + M+ GF FY Y
Sbjct: 188 ----EPSLLHGDLWNGNVALTAFG-PICFDPACYWGDRECDIAMTELFGGFQPEFYQGYE 242
Query: 280 EVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIID 320
VMP PG+ +R+D+Y LYH LNH NLFG Y A I+
Sbjct: 243 SVMPLLPGYHERKDIYNLYHILNHCNLFGGHYLEQAQLTIN 283
>sp|Q8D9N5|Y2562_VIBVU Uncharacterized protein VV1_2562 OS=Vibrio vulnificus (strain
CMCP6) GN=VV1_2562 PE=3 SV=1
Length = 288
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 136/274 (49%), Gaps = 9/274 (3%)
Query: 53 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF 112
I + + GG IN +FVK N S F+ EA L + +T ++ P
Sbjct: 19 IVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEAENLRLLRQTDSVTLPELV 78
Query: 113 KVGALPTGGSYIIMEFIEFG--SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP 170
+G + ++II+ F+ N FG++LA +H G+ K +G D DN +G+T
Sbjct: 79 LIGNTKSN-AFIILNFLPTKPLEDTENSYKFGQQLAYLHLWGEQ-KEYGCDQDNYLGATL 136
Query: 171 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLH 230
Q N W W F++E R+G+QL+L ++ + +++ +A N P L+H
Sbjct: 137 QPNAWHKKWSTFFSEQRIGWQLQLLKEK---GVTFGVIDEIVEVVARQLLNHNPRPSLIH 193
Query: 231 GDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFE 289
GDLW GN++ G P+ DPACY+G E + M+ GF FY Y ++ P G+
Sbjct: 194 GDLWHGNVALSAFG-PICYDPACYWGDRECDIAMTELFGGFNAEFYRGYEDIAPLPFGYT 252
Query: 290 KRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 323
+R+++Y LYH LNH N FG Y A ID L
Sbjct: 253 QRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKIL 286
>sp|P46381|YNIA_ENTAK Uncharacterized protein EAE_16955 OS=Enterobacter aerogenes (strain
ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC
13534 / NCIMB 10102 / NCTC 10006) GN=EAE_16955 PE=3 SV=2
Length = 286
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 16/272 (5%)
Query: 59 VGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118
+ GG I+ A +FVK + +F EA L + +T+ P+ F VG+
Sbjct: 25 LPGGEIHAAWHLRFGGKDYFVKCDERELLPIFTAEADQLELLSRCKTVSVPQVFAVGS-D 83
Query: 119 TGGSYIIMEFIEFGS-SRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTS 177
S+++ME++ N + G+++A +H+ + FG D DN + +TPQ N W
Sbjct: 84 RDYSFLVMEYLPPRPLDAHNAFLLGQQIAHLHQWSDQPQ-FGLDFDNDLSTTPQPNAWQR 142
Query: 178 NWIEFYAEHRLGYQLKLALDQ---YGD-STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDL 233
W F+AE R+G+QL+LA ++ +GD I + + + + P +P LLHGDL
Sbjct: 143 RWSTFFAEQRIGWQLELAAEKGLHFGDIDNIVESVQQRLSSHQP-------QPSLLHGDL 195
Query: 234 WSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSFYNSYFEVMPKQPGFEKRR 292
WSGN + NG P I DPACY+G E + M Y+ Y V P GF +R+
Sbjct: 196 WSGNCALGPNG-PYIFDPACYWGDRECDLAMLPLHPEQPPQIYDGYQSVSPLPAGFLERQ 254
Query: 293 DLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324
+Y LY LN LFG + +A +D+ L+
Sbjct: 255 PIYQLYTLLNRAILFGGQHLVTAQKALDEALQ 286
>sp|P58065|YNIA_ECO57 Uncharacterized protein YniA OS=Escherichia coli O157:H7 GN=yniA
PE=3 SV=1
Length = 286
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 135/271 (49%), Gaps = 20/271 (7%)
Query: 61 GGCINLASRYGTDAGSFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT 119
GG ++ A FFVK + R + P F EA L + ++T+ P+ + VGA
Sbjct: 26 GGEVHAAWHLRYAGHDFFVKCDERELLPG-FTAEADQLELLSRSKTVTVPKVWAVGA-DR 83
Query: 120 GGSYIIMEFIEFGSSRGNQS-VFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN 178
S+++M+++ + + + G+++A +H+ + FG D DN++ +TPQ N W
Sbjct: 84 DYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQ-FGLDFDNSLSTTPQPNTWQRR 142
Query: 179 WIEFYAEHRLGYQLKLALDQ---YG--DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDL 233
W F+AE R+G+QL+LA ++ +G D+ + RL + +P LLHGDL
Sbjct: 143 WSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLASH--------QPQPSLLHGDL 194
Query: 234 WSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSFYNSYFEVMPKQPGFEKRR 292
WSGN + +G P I DPACY+G E + M Y+ Y V P F +R+
Sbjct: 195 WSGNCALGPDG-PYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQ 253
Query: 293 DLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 323
+Y LY LN LFG + A +D L
Sbjct: 254 PVYQLYTLLNRARLFGGQHLVIAQQSLDRLL 284
>sp|P77739|YNIA_ECOLI Uncharacterized protein YniA OS=Escherichia coli (strain K12)
GN=yniA PE=3 SV=1
Length = 286
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 61 GGCINLASRYGTDAGSFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT 119
GG ++ A FFVK + R + P F EA L + ++T+ P+ + VGA
Sbjct: 26 GGEVHAAWHLRYAGHDFFVKCDERELLPG-FTAEADQLELLSRSKTVTVPKVWAVGA-DR 83
Query: 120 GGSYIIMEFIEFGSSRGNQS-VFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN 178
S+++M+++ + + + G+++A +H+ + FG D DN + +TPQ N W
Sbjct: 84 DYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQ-FGLDFDNALSTTPQPNTWQRR 142
Query: 179 WIEFYAEHRLGYQLKLALDQ---YG--DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDL 233
W F+AE R+G+QL+LA ++ +G D+ + RL + +P LLHGDL
Sbjct: 143 WSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLASH--------QPQPSLLHGDL 194
Query: 234 WSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSFYNSYFEVMPKQPGFEKRR 292
WSGN + +G P I DPACY+G E + M Y+ Y V P F +R+
Sbjct: 195 WSGNCALGPDG-PYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQ 253
Query: 293 DLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 323
+Y LY LN LFG + A +D L
Sbjct: 254 PVYQLYTLLNRARLFGGQHLVIAQQSLDRLL 284
>sp|Q9CN56|Y587_PASMU Uncharacterized protein PM0587 OS=Pasteurella multocida (strain
Pm70) GN=PM0587 PE=3 SV=1
Length = 288
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 124/252 (49%), Gaps = 15/252 (5%)
Query: 78 FVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGN 137
F+K N SMF EA L + +T TI P + VG T S++++E + +
Sbjct: 44 FLKVNDKTFRSMFRAEADQLLLLAKTNTINVPNVYTVGCSHTH-SFLLLEALPLDKTNPV 102
Query: 138 QSV--FGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA 195
++ FG++LA++H K + +G D D +G Q N W NW F++E R+G+QL++
Sbjct: 103 DAMGKFGEQLAKLHLI-KGADNYGLDFDTWLGPEYQPNGWKENWATFFSEQRIGWQLQIC 161
Query: 196 LDQ---YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252
++ +GD + L+K +A L +P LLHG+LW N ++ K E DPA
Sbjct: 162 REKNLVFGDIEV------LVKKVAELLAKHKPQPALLHGNLWIENCATVKQ-EIFTYDPA 214
Query: 253 CYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGY 311
CY+G E + S F FY SY P G+ +R+ +Y LY+ LN + F Y
Sbjct: 215 CYWGDRECDLAFSELFEPFPRQFYESYDRTYPIDEGYPERKAIYQLYYLLNFSHRFNKHY 274
Query: 312 RSSALSIIDDYL 323
I D L
Sbjct: 275 VELTKKFIHDIL 286
>sp|P46382|YNIA_KLEPN Uncharacterized protein in tonB 3'region (Fragment) OS=Klebsiella
pneumoniae PE=3 SV=1
Length = 123
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 225 EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSFYNSYFEVMP 283
+P LLHGDLWSGN + +G P I DPACY+G E + M Y+ Y V P
Sbjct: 19 QPSLLHGDLWSGNCALGPDG-PYIFDPACYWGDRECDLAMLPMHPEQPPQIYDGYQSVSP 77
Query: 284 KQPGFEKRRDLYMLYHYLNHYNLFGSGYR-SSALSIIDDYL 323
GF R+ +Y LY LN LFG + ++A +DD L
Sbjct: 78 LPSGFLDRQPIYQLYTLLNRAILFGGQHLVTAAQQALDDVL 118
>sp|P41370|YIL2_STAAU Uncharacterized protein in ileS 3'region (Fragment)
OS=Staphylococcus aureus PE=4 SV=1
Length = 131
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRP 111
+I KI P+ GG +NL+ +F+K + + F+ E L + + + I P+
Sbjct: 13 NIQKIFPIAGGYVNLSFSVDASNKKYFLKLQPNTKSNFFDYELSSLKELTD-KNIPVPQI 71
Query: 112 FKVGALPTGGSYIIMEFIEFGSSRGNQ-SVFGKKLAEMHKAGKSSKGFGF 160
G L S++++EFIE G + GK +A MHK S FGF
Sbjct: 72 INKGEL-DNNSFLLLEFIENGHAYPESYRKLGKIVANMHKNINSLNLFGF 120
>sp|Q65KK1|MTNK_BACLD Methylthioribose kinase OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=mtnK PE=3 SV=1
Length = 398
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 222 VNVEPCLLHGDLWSGNISSDKNGEPVILDP 251
++ E L+HGDL +G+I + ++GE I+DP
Sbjct: 223 LSAEETLIHGDLHTGSIFAGEDGETKIIDP 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,309,497
Number of Sequences: 539616
Number of extensions: 5960696
Number of successful extensions: 10300
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 10231
Number of HSP's gapped (non-prelim): 36
length of query: 328
length of database: 191,569,459
effective HSP length: 118
effective length of query: 210
effective length of database: 127,894,771
effective search space: 26857901910
effective search space used: 26857901910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)