Query 020294
Match_columns 328
No_of_seqs 143 out of 1502
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 08:35:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020294.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020294hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03881 Fructosamin_kin: Fruc 100.0 9.8E-54 2.1E-58 385.7 22.3 283 37-324 2-287 (288)
2 COG3001 Uncharacterized protei 100.0 4.5E-52 9.7E-57 351.3 25.2 281 37-324 2-285 (286)
3 KOG3021 Predicted kinase [Gene 100.0 2.1E-52 4.5E-57 349.2 22.3 288 41-328 2-313 (313)
4 PRK10593 hypothetical protein; 100.0 9.3E-41 2E-45 304.9 25.5 277 38-327 2-297 (297)
5 PRK05231 homoserine kinase; Pr 100.0 1.4E-30 3.1E-35 240.6 22.8 245 29-294 1-267 (319)
6 TIGR00938 thrB_alt homoserine 100.0 3.3E-29 7.1E-34 230.4 24.5 246 29-295 1-268 (307)
7 cd05153 HomoserineK_II Homoser 100.0 2.5E-27 5.4E-32 216.7 23.5 236 38-297 2-258 (296)
8 COG2334 Putative homoserine ki 99.9 2.4E-26 5.2E-31 210.8 21.2 242 27-290 3-272 (331)
9 TIGR02721 ycfN_thiK thiamine k 99.9 8.8E-24 1.9E-28 189.4 22.8 231 56-322 1-255 (256)
10 PRK11768 serine/threonine prot 99.9 1.7E-23 3.7E-28 193.7 21.8 248 32-302 8-277 (325)
11 cd05150 APH Aminoglycoside 3'- 99.9 1.7E-22 3.8E-27 179.6 19.9 218 56-300 3-242 (244)
12 TIGR02172 Fb_sc_TIGR02172 Fibr 99.9 1.1E-22 2.4E-27 178.7 17.8 190 54-280 4-212 (226)
13 PLN02876 acyl-CoA dehydrogenas 99.9 3.1E-22 6.7E-27 206.0 23.6 255 34-305 17-331 (822)
14 cd05155 APH_ChoK_like_1 Unchar 99.9 3.5E-22 7.5E-27 176.8 18.8 215 56-295 2-233 (235)
15 PF01636 APH: Phosphotransfera 99.9 1.5E-22 3.3E-27 177.6 13.5 220 55-295 1-239 (239)
16 PRK09550 mtnK methylthioribose 99.9 3.1E-21 6.8E-26 181.1 22.8 224 29-265 1-262 (401)
17 COG3173 Predicted aminoglycosi 99.9 1.6E-21 3.5E-26 177.1 20.2 233 34-285 7-273 (321)
18 PLN02756 S-methyl-5-thioribose 99.9 3E-21 6.5E-26 180.3 21.2 214 31-265 5-269 (418)
19 TIGR02906 spore_CotS spore coa 99.9 1.7E-20 3.7E-25 172.7 25.4 223 64-298 9-269 (313)
20 cd05152 MPH2' Macrolide 2'-Pho 99.9 5.8E-21 1.3E-25 172.6 21.7 212 47-283 7-247 (276)
21 cd05154 ACAD10_11_like Acyl-Co 99.9 1.3E-20 2.7E-25 164.4 18.4 191 55-265 2-216 (223)
22 cd05157 ETNK_euk Ethanolamine 99.9 3.2E-20 6.9E-25 164.0 17.4 194 55-265 2-211 (235)
23 TIGR02904 spore_ysxE spore coa 99.8 5.7E-20 1.2E-24 169.2 17.7 238 41-293 2-273 (309)
24 PRK06149 hypothetical protein; 99.8 2.6E-19 5.6E-24 186.9 23.5 236 35-293 17-290 (972)
25 PRK06148 hypothetical protein; 99.8 3.6E-19 7.7E-24 186.0 23.3 237 35-295 11-285 (1013)
26 cd05156 ChoK_euk Choline Kinas 99.8 2.1E-19 4.6E-24 164.8 18.7 196 55-265 2-223 (302)
27 PRK12396 5-methylribose kinase 99.8 1.9E-19 4.1E-24 167.4 16.0 218 28-266 3-267 (409)
28 cd05151 ChoK Choline Kinase (C 99.8 4.5E-19 9.9E-24 148.4 15.7 159 55-282 2-168 (170)
29 PLN02236 choline kinase 99.8 4.1E-17 8.9E-22 152.1 23.7 199 37-265 16-241 (344)
30 PLN02421 phosphotransferase, a 99.8 1E-16 2.2E-21 148.7 22.1 200 52-281 15-253 (330)
31 TIGR01767 MTRK 5-methylthiorib 99.8 1.9E-17 4.2E-22 152.3 16.9 195 58-266 2-232 (370)
32 PTZ00296 choline kinase; Provi 99.7 9.9E-15 2.1E-19 139.7 23.0 206 34-265 83-323 (442)
33 PTZ00384 choline kinase; Provi 99.6 9.8E-14 2.1E-18 130.7 21.7 203 37-265 31-266 (383)
34 PRK10271 thiK thiamine kinase; 99.6 3.5E-14 7.5E-19 119.7 15.4 170 124-322 1-184 (188)
35 TIGR02905 spore_yutH spore coa 99.6 1.8E-13 3.9E-18 126.2 20.2 221 43-287 4-258 (313)
36 PF07914 DUF1679: Protein of u 99.6 5.8E-14 1.3E-18 133.3 17.3 258 33-300 11-364 (414)
37 COG3231 Aph Aminoglycoside pho 99.6 5.7E-14 1.2E-18 119.5 15.0 214 56-298 23-262 (266)
38 cd05120 APH_ChoK_like Aminogly 99.6 9E-14 2E-18 112.8 13.8 145 56-266 3-149 (155)
39 PF04655 APH_6_hur: Aminoglyco 99.5 5.4E-12 1.2E-16 112.0 17.6 215 57-302 8-244 (253)
40 PF02958 EcKinase: Ecdysteroid 99.4 1.3E-12 2.7E-17 119.5 12.6 205 60-267 2-262 (294)
41 PF01633 Choline_kinase: Choli 99.4 4E-13 8.6E-18 116.9 6.3 187 75-283 3-207 (211)
42 COG4857 Predicted kinase [Gene 99.4 3.5E-11 7.6E-16 105.6 15.5 202 48-265 27-267 (408)
43 COG0510 ycfN Thiamine kinase a 99.3 5E-10 1.1E-14 100.8 19.0 198 55-285 10-218 (269)
44 TIGR03724 arch_bud32 Kae1-asso 99.3 1.1E-10 2.3E-15 100.3 13.0 134 59-264 2-147 (199)
45 PRK14879 serine/threonine prot 99.2 1E-10 2.3E-15 101.2 12.7 139 57-264 2-152 (211)
46 COG3178 Predicted phosphotrans 99.2 2.2E-10 4.8E-15 101.4 13.0 194 89-300 66-286 (351)
47 PRK10359 lipopolysaccharide co 99.2 6.5E-10 1.4E-14 97.2 13.7 90 42-133 23-129 (232)
48 KOG4720 Ethanolamine kinase [L 99.1 3.4E-09 7.3E-14 93.9 16.0 220 40-282 68-321 (391)
49 COG3642 Mn2+-dependent serine/ 99.1 1.1E-09 2.3E-14 91.4 12.1 154 58-283 3-181 (204)
50 PRK01723 3-deoxy-D-manno-octul 99.1 4.6E-09 1E-13 93.1 16.3 71 61-132 42-131 (239)
51 COG0478 RIO-like serine/threon 99.1 6.4E-10 1.4E-14 97.9 9.6 136 57-263 97-260 (304)
52 PRK15123 lipopolysaccharide co 98.9 1.5E-08 3.2E-13 91.1 12.9 66 66-132 37-120 (268)
53 PRK09902 hypothetical protein; 98.9 1E-07 2.2E-12 82.0 16.3 180 37-279 7-214 (216)
54 PRK09605 bifunctional UGMP fam 98.9 8.6E-09 1.9E-13 102.0 11.0 159 56-288 338-521 (535)
55 TIGR01982 UbiB 2-polyprenylphe 98.9 1.6E-08 3.5E-13 97.3 12.5 96 35-134 96-245 (437)
56 cd05145 RIO1_like RIO kinase f 98.9 4.3E-08 9.4E-13 83.7 13.1 71 57-133 3-103 (190)
57 PF01163 RIO1: RIO1 family; I 98.8 1.4E-08 2.9E-13 86.5 8.7 38 90-133 55-94 (188)
58 cd05146 RIO3_euk RIO kinase fa 98.8 3.1E-08 6.8E-13 84.7 10.8 37 91-133 74-110 (197)
59 cd05147 RIO1_euk RIO kinase fa 98.8 5.7E-08 1.2E-12 83.1 11.1 71 57-133 3-103 (190)
60 KOG3087 Serine/threonine prote 98.7 3.8E-07 8.3E-12 76.1 13.5 75 55-133 11-96 (229)
61 COG1718 RIO1 Serine/threonine 98.7 2.9E-07 6.2E-12 80.5 12.5 136 58-259 55-220 (268)
62 cd05144 RIO2_C RIO kinase fami 98.7 3.2E-07 6.9E-12 78.8 12.5 73 56-134 20-118 (198)
63 smart00090 RIO RIO-like kinase 98.7 3.2E-07 6.9E-12 81.2 12.6 90 36-134 16-135 (237)
64 smart00587 CHK ZnF_C4 abd HLH 98.7 7.7E-08 1.7E-12 82.7 7.7 58 224-281 118-189 (196)
65 PF06293 Kdo: Lipopolysacchari 98.6 2.1E-07 4.5E-12 80.6 10.3 45 87-132 55-102 (206)
66 TIGR02457 TreS_Cterm trehalose 98.6 1.8E-07 3.8E-12 91.3 10.5 195 55-265 169-428 (528)
67 PRK04750 ubiB putative ubiquin 98.6 1.9E-07 4.1E-12 91.5 10.0 97 35-134 98-248 (537)
68 KOG2686 Choline kinase [Cell w 98.6 6.8E-07 1.5E-11 81.9 12.2 184 52-265 41-253 (366)
69 cd05119 RIO RIO kinase family, 98.5 1.1E-06 2.5E-11 74.3 12.0 71 57-133 3-101 (187)
70 PRK12274 serine/threonine prot 98.5 1.2E-06 2.6E-11 75.5 11.8 71 56-133 7-84 (218)
71 COG0661 AarF Predicted unusual 98.5 7.8E-07 1.7E-11 86.7 11.3 96 35-134 104-253 (517)
72 KOG2268 Serine/threonine prote 98.5 1.6E-07 3.4E-12 84.9 5.1 131 59-261 100-258 (465)
73 PF06176 WaaY: Lipopolysacchar 98.5 3.1E-06 6.7E-11 73.2 12.3 94 39-134 20-130 (229)
74 cd00180 PKc Catalytic domain o 98.4 4.4E-06 9.6E-11 70.5 11.8 71 59-133 1-77 (215)
75 KOG0605 NDR and related serine 98.4 2.5E-06 5.4E-11 81.2 10.8 138 53-254 143-288 (550)
76 KOG0592 3-phosphoinositide-dep 98.3 3.7E-06 8E-11 80.2 10.2 133 57-252 79-219 (604)
77 PRK14705 glycogen branching en 98.3 2.9E-05 6.4E-10 82.3 17.3 251 56-324 149-471 (1224)
78 COG2187 Uncharacterized protei 98.2 4.1E-06 8.9E-11 74.2 8.0 99 207-307 188-300 (337)
79 PRK09188 serine/threonine prot 98.2 1.5E-05 3.2E-10 74.9 11.6 72 56-134 23-105 (365)
80 cd05598 STKc_LATS Catalytic do 98.2 1.6E-05 3.4E-10 75.1 11.8 76 55-134 5-88 (376)
81 KOG0608 Warts/lats-like serine 98.2 5.6E-06 1.2E-10 80.4 7.9 142 51-256 629-778 (1034)
82 cd05628 STKc_NDR1 Catalytic do 98.2 1.6E-05 3.4E-10 74.8 10.7 76 55-134 5-88 (363)
83 cd05627 STKc_NDR2 Catalytic do 98.1 2.3E-05 5E-10 73.5 11.1 77 54-134 4-88 (360)
84 cd05587 STKc_cPKC Catalytic do 98.1 3.1E-05 6.7E-10 71.5 11.1 76 56-134 5-88 (324)
85 cd05614 STKc_MSK2_N N-terminal 98.1 3.2E-05 7E-10 71.5 11.1 76 56-134 5-92 (332)
86 cd05626 STKc_LATS2 Catalytic d 98.1 1.5E-05 3.2E-10 75.5 8.9 76 54-133 4-87 (381)
87 KOG1235 Predicted unusual prot 98.1 3.9E-05 8.5E-10 74.8 11.4 95 36-134 141-289 (538)
88 PLN00034 mitogen-activated pro 98.0 2.5E-05 5.5E-10 73.0 9.8 77 54-134 77-159 (353)
89 cd05600 STKc_Sid2p_Dbf2p Catal 98.0 3.8E-05 8.2E-10 71.2 10.9 75 56-134 6-88 (333)
90 cd05599 STKc_NDR_like Catalyti 98.0 3.3E-05 7.1E-10 72.5 10.6 74 56-133 6-87 (364)
91 cd05084 PTKc_Fes Catalytic dom 98.0 5.3E-05 1.1E-09 66.9 11.3 73 58-134 2-80 (252)
92 cd05625 STKc_LATS1 Catalytic d 98.0 4.4E-05 9.5E-10 72.2 11.3 77 54-134 4-88 (382)
93 COG3570 StrB Streptomycin 6-ki 98.0 0.00011 2.5E-09 62.4 12.2 169 63-267 24-202 (274)
94 cd05102 PTKc_VEGFR3 Catalytic 98.0 2.9E-05 6.2E-10 72.1 9.8 77 56-134 12-99 (338)
95 KOG1187 Serine/threonine prote 98.0 6.9E-05 1.5E-09 70.5 12.3 142 58-258 82-229 (361)
96 cd05629 STKc_NDR_like_fungal C 98.0 4.4E-05 9.6E-10 72.1 11.0 75 56-134 6-88 (377)
97 cd05591 STKc_nPKC_epsilon Cata 98.0 4.9E-05 1.1E-09 70.1 10.9 74 58-134 2-83 (321)
98 cd05085 PTKc_Fer Catalytic dom 98.0 7.3E-05 1.6E-09 65.8 11.5 73 58-134 2-79 (250)
99 PTZ00263 protein kinase A cata 98.0 6E-05 1.3E-09 69.8 11.3 76 55-134 22-105 (329)
100 KOG1989 ARK protein kinase fam 98.0 7.3E-05 1.6E-09 75.0 12.3 174 52-285 38-236 (738)
101 KOG0610 Putative serine/threon 98.0 5E-05 1.1E-09 70.4 10.4 139 52-252 78-224 (459)
102 cd05071 PTKc_Src Catalytic dom 98.0 0.00014 3E-09 64.8 13.1 74 56-134 11-87 (262)
103 cd05582 STKc_RSK_N N-terminal 98.0 4.6E-05 1E-09 70.1 10.3 73 57-133 2-84 (318)
104 cd05589 STKc_PKN Catalytic dom 98.0 6.2E-05 1.3E-09 69.5 11.1 78 56-134 4-89 (324)
105 cd05082 PTKc_Csk Catalytic dom 98.0 0.00013 2.7E-09 64.7 12.7 76 56-134 11-87 (256)
106 cd05590 STKc_nPKC_eta Catalyti 98.0 4.7E-05 1E-09 70.3 10.2 73 58-133 2-82 (320)
107 cd05601 STKc_CRIK Catalytic do 98.0 5.4E-05 1.2E-09 70.0 10.6 75 56-134 6-88 (330)
108 cd05573 STKc_ROCK_NDR_like Cat 98.0 2.2E-05 4.7E-10 73.1 7.9 75 56-134 6-88 (350)
109 cd05069 PTKc_Yes Catalytic dom 98.0 0.00013 2.9E-09 64.7 12.6 74 56-134 11-87 (260)
110 cd05571 STKc_PKB Catalytic dom 98.0 5.7E-05 1.2E-09 69.7 10.5 73 58-134 2-82 (323)
111 cd05597 STKc_DMPK_like Catalyt 98.0 6.8E-05 1.5E-09 69.5 11.0 75 56-134 6-88 (331)
112 cd05593 STKc_PKB_gamma Catalyt 98.0 6.4E-05 1.4E-09 69.6 10.7 73 58-134 2-82 (328)
113 cd05584 STKc_p70S6K Catalytic 98.0 5E-05 1.1E-09 70.1 10.0 74 56-133 1-86 (323)
114 cd05594 STKc_PKB_alpha Catalyt 97.9 0.00018 3.9E-09 66.5 13.4 72 58-133 2-81 (325)
115 cd05595 STKc_PKB_beta Catalyti 97.9 5.9E-05 1.3E-09 69.7 10.1 73 58-134 2-82 (323)
116 cd05588 STKc_aPKC Catalytic do 97.9 7.5E-05 1.6E-09 69.2 10.7 74 58-134 2-83 (329)
117 cd07871 STKc_PCTAIRE3 Catalyti 97.9 9.6E-05 2.1E-09 66.9 11.2 73 55-131 9-87 (288)
118 cd05612 STKc_PRKX_like Catalyt 97.9 6.3E-05 1.4E-09 68.3 10.0 75 56-134 6-88 (291)
119 cd05596 STKc_ROCK Catalytic do 97.9 8.7E-05 1.9E-09 70.0 11.2 77 54-134 46-130 (370)
120 cd05114 PTKc_Tec_Rlk Catalytic 97.9 0.00018 3.9E-09 63.7 12.7 77 54-134 7-86 (256)
121 cd05104 PTKc_Kit Catalytic dom 97.9 9.9E-05 2.1E-09 69.8 11.6 76 56-134 40-126 (375)
122 KOG2270 Serine/threonine prote 97.9 7.3E-05 1.6E-09 69.1 10.0 74 52-131 144-248 (520)
123 cd05622 STKc_ROCK1 Catalytic d 97.9 0.00015 3.2E-09 68.5 12.6 79 52-134 44-130 (371)
124 cd05621 STKc_ROCK2 Catalytic d 97.9 0.00016 3.4E-09 68.3 12.8 78 53-134 45-130 (370)
125 cd05616 STKc_cPKC_beta Catalyt 97.9 0.0001 2.2E-09 68.1 11.2 76 56-134 5-88 (323)
126 cd05067 PTKc_Lck_Blk Catalytic 97.9 0.00018 4E-09 63.8 12.5 74 56-134 11-87 (260)
127 cd05072 PTKc_Lyn Catalytic dom 97.9 0.00019 4.1E-09 63.7 12.6 79 52-134 7-88 (261)
128 PF00069 Pkinase: Protein kina 97.9 0.00014 3E-09 64.2 11.7 74 56-133 4-84 (260)
129 cd05034 PTKc_Src_like Catalyti 97.9 0.00022 4.9E-09 63.1 12.9 75 56-134 11-88 (261)
130 KOG0598 Ribosomal protein S6 k 97.9 5.6E-05 1.2E-09 69.1 8.8 136 54-253 28-171 (357)
131 cd05574 STKc_phototropin_like 97.9 0.00021 4.5E-09 65.5 12.9 74 56-133 6-87 (316)
132 smart00219 TyrKc Tyrosine kina 97.9 0.00027 5.9E-09 62.2 13.2 75 56-134 4-88 (258)
133 cd05620 STKc_nPKC_delta Cataly 97.9 0.00012 2.5E-09 67.5 11.1 74 58-134 2-83 (316)
134 cd05592 STKc_nPKC_theta_delta 97.9 0.00012 2.5E-09 67.5 11.0 74 58-134 2-83 (316)
135 PTZ00426 cAMP-dependent protei 97.9 8E-05 1.7E-09 69.5 10.0 76 55-134 34-118 (340)
136 cd06649 PKc_MEK2 Catalytic dom 97.9 0.00011 2.4E-09 68.0 10.9 78 53-134 7-90 (331)
137 cd05068 PTKc_Frk_like Catalyti 97.9 0.00025 5.4E-09 63.0 12.8 78 53-134 8-88 (261)
138 cd06644 STKc_STK10_LOK Catalyt 97.9 0.00033 7.1E-09 63.4 13.6 74 56-133 17-95 (292)
139 PRK13184 pknD serine/threonine 97.9 0.00029 6.2E-09 73.2 14.4 75 56-134 7-89 (932)
140 cd05615 STKc_cPKC_alpha Cataly 97.9 0.00012 2.7E-09 67.5 10.8 76 56-134 5-88 (323)
141 cd05070 PTKc_Fyn_Yrk Catalytic 97.9 0.0002 4.3E-09 63.6 11.7 74 56-134 11-87 (260)
142 cd05096 PTKc_DDR1 Catalytic do 97.9 0.00037 8E-09 63.5 13.8 75 56-134 10-106 (304)
143 cd05610 STKc_MASTL Catalytic d 97.9 0.00015 3.3E-09 73.8 12.2 75 56-134 9-91 (669)
144 cd05041 PTKc_Fes_like Catalyti 97.9 0.00029 6.2E-09 62.1 12.6 73 58-134 2-79 (251)
145 cd05585 STKc_YPK1_like Catalyt 97.9 0.0001 2.3E-09 67.6 10.1 72 59-134 1-80 (312)
146 cd05049 PTKc_Trk Catalytic dom 97.9 8.7E-05 1.9E-09 66.5 9.4 75 56-134 10-95 (280)
147 cd06656 STKc_PAK3 Catalytic do 97.9 0.00036 7.9E-09 63.5 13.6 77 53-133 21-102 (297)
148 PTZ00267 NIMA-related protein 97.9 0.00024 5.2E-09 69.5 13.1 75 56-134 72-152 (478)
149 cd06638 STKc_myosinIIIA Cataly 97.9 0.0003 6.5E-09 63.3 12.8 78 55-134 22-107 (286)
150 cd07869 STKc_PFTAIRE1 Catalyti 97.8 0.00024 5.3E-09 64.7 12.2 74 55-132 9-88 (303)
151 cd05617 STKc_aPKC_zeta Catalyt 97.8 5.5E-05 1.2E-09 70.0 7.9 74 58-134 2-83 (327)
152 cd07872 STKc_PCTAIRE2 Catalyti 97.8 0.00022 4.7E-09 65.3 11.8 74 54-131 9-88 (309)
153 cd05083 PTKc_Chk Catalytic dom 97.8 0.00016 3.4E-09 64.0 10.5 74 56-134 11-85 (254)
154 KOG0595 Serine/threonine-prote 97.8 0.00021 4.7E-09 66.2 11.3 73 58-134 17-96 (429)
155 cd05608 STKc_GRK1 Catalytic do 97.8 0.00019 4E-09 64.8 10.8 72 59-134 1-80 (280)
156 cd05618 STKc_aPKC_iota Catalyt 97.8 6.6E-05 1.4E-09 69.6 8.1 74 58-134 2-83 (329)
157 cd05073 PTKc_Hck Catalytic dom 97.8 0.00042 9.1E-09 61.5 13.0 78 52-134 7-87 (260)
158 cd05079 PTKc_Jak1_rpt2 Catalyt 97.8 0.00023 5.1E-09 64.1 11.4 78 54-134 7-95 (284)
159 cd05624 STKc_MRCK_beta Catalyt 97.8 0.00011 2.5E-09 68.0 9.5 75 56-134 6-88 (331)
160 KOG4250 TANK binding protein k 97.8 6.4E-05 1.4E-09 74.0 7.7 78 54-134 16-104 (732)
161 cd05059 PTKc_Tec_like Catalyti 97.8 0.0002 4.4E-09 63.4 10.5 76 55-134 8-86 (256)
162 cd05623 STKc_MRCK_alpha Cataly 97.8 0.0002 4.3E-09 66.4 10.8 76 55-134 5-88 (332)
163 cd05631 STKc_GRK4 Catalytic do 97.8 0.00036 7.7E-09 63.1 12.2 76 55-134 4-87 (285)
164 cd05570 STKc_PKC Catalytic dom 97.8 0.00018 3.9E-09 66.2 10.3 74 58-134 2-83 (318)
165 cd06650 PKc_MEK1 Catalytic dom 97.8 0.00038 8.3E-09 64.6 12.6 76 55-134 9-90 (333)
166 cd05580 STKc_PKA Catalytic dom 97.8 0.00031 6.8E-09 63.5 11.6 75 56-134 6-88 (290)
167 PRK10345 hypothetical protein; 97.8 0.00022 4.7E-09 61.9 10.0 75 53-128 4-86 (210)
168 cd00192 PTKc Catalytic domain 97.8 0.0004 8.7E-09 61.1 11.9 73 58-134 2-83 (262)
169 cd05613 STKc_MSK1_N N-terminal 97.8 0.00034 7.4E-09 63.2 11.6 76 56-134 5-92 (290)
170 cd05603 STKc_SGK2 Catalytic do 97.8 0.00033 7.2E-09 64.5 11.7 27 226-252 115-141 (321)
171 cd05602 STKc_SGK1 Catalytic do 97.8 0.00026 5.7E-09 65.3 11.1 27 226-252 115-141 (325)
172 cd05088 PTKc_Tie2 Catalytic do 97.8 0.00051 1.1E-08 62.7 12.8 76 56-134 12-95 (303)
173 cd08219 STKc_Nek3 Catalytic do 97.7 0.00063 1.4E-08 60.1 13.0 74 56-133 5-84 (255)
174 cd05586 STKc_Sck1_like Catalyt 97.7 0.00028 6E-09 65.3 11.0 27 226-252 115-141 (330)
175 cd05039 PTKc_Csk_like Catalyti 97.7 0.00051 1.1E-08 60.7 12.2 75 56-134 11-87 (256)
176 cd05604 STKc_SGK3 Catalytic do 97.7 0.00041 9E-09 64.0 11.9 27 226-252 115-141 (325)
177 cd07848 STKc_CDKL5 Catalytic d 97.7 0.00048 1E-08 62.0 12.0 73 56-132 6-85 (287)
178 KOG0615 Serine/threonine prote 97.7 0.00042 9.1E-09 64.5 11.4 107 22-134 145-263 (475)
179 cd05113 PTKc_Btk_Bmx Catalytic 97.7 0.00046 9.9E-09 61.2 11.6 77 54-134 7-86 (256)
180 cd05038 PTKc_Jak_rpt2 Catalyti 97.7 0.00048 1.1E-08 61.7 11.9 78 54-134 7-95 (284)
181 cd06631 STKc_YSK4 Catalytic do 97.7 0.00021 4.4E-09 63.6 9.4 74 57-134 6-89 (265)
182 KOG0581 Mitogen-activated prot 97.7 0.00037 8.1E-09 63.9 10.8 137 52-253 80-225 (364)
183 cd05619 STKc_nPKC_theta Cataly 97.7 0.00016 3.4E-09 66.6 8.7 74 58-134 2-83 (316)
184 cd08215 STKc_Nek Catalytic dom 97.7 0.00072 1.6E-08 59.3 12.5 75 56-134 5-86 (258)
185 cd06641 STKc_MST3 Catalytic do 97.7 0.00061 1.3E-08 61.1 12.2 76 55-134 8-89 (277)
186 KOG0583 Serine/threonine prote 97.7 0.00052 1.1E-08 64.8 11.9 134 56-252 22-166 (370)
187 cd05052 PTKc_Abl Catalytic dom 97.7 0.00089 1.9E-08 59.5 13.0 78 53-134 8-89 (263)
188 cd05103 PTKc_VEGFR2 Catalytic 97.7 0.00066 1.4E-08 63.2 12.6 80 53-134 9-99 (343)
189 cd05607 STKc_GRK7 Catalytic do 97.7 0.00057 1.2E-08 61.5 11.8 72 59-134 1-80 (277)
190 cd08224 STKc_Nek6_Nek7 Catalyt 97.7 0.00069 1.5E-08 60.1 12.2 75 56-134 7-89 (267)
191 cd05583 STKc_MSK_N N-terminal 97.7 0.00038 8.3E-09 62.8 10.6 76 56-134 5-92 (288)
192 cd07873 STKc_PCTAIRE1 Catalyti 97.7 0.00052 1.1E-08 62.4 11.6 74 54-131 9-88 (301)
193 cd06614 STKc_PAK Catalytic dom 97.7 0.00054 1.2E-08 61.7 11.6 77 54-134 22-102 (286)
194 cd05122 PKc_STE Catalytic doma 97.7 0.0009 2E-08 58.4 12.7 74 56-133 5-83 (253)
195 cd06639 STKc_myosinIIIB Cataly 97.7 0.00058 1.2E-08 61.7 11.7 79 54-134 25-111 (291)
196 cd05609 STKc_MAST Catalytic do 97.7 0.00023 5E-09 65.0 9.1 75 56-134 6-88 (305)
197 cd07862 STKc_CDK6 Catalytic do 97.7 0.00061 1.3E-08 61.5 11.8 76 56-131 6-93 (290)
198 cd08529 STKc_FA2-like Catalyti 97.7 0.00073 1.6E-08 59.5 12.0 75 56-134 5-86 (256)
199 cd06615 PKc_MEK Catalytic doma 97.7 0.00081 1.8E-08 61.5 12.6 76 55-134 5-86 (308)
200 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.7 0.00069 1.5E-08 60.9 12.0 79 53-134 6-94 (284)
201 cd08228 STKc_Nek6 Catalytic do 97.7 0.00033 7.1E-09 62.3 9.7 75 56-134 7-89 (267)
202 KOG0192 Tyrosine kinase specif 97.7 0.00068 1.5E-08 63.7 12.1 73 59-134 49-127 (362)
203 KOG0596 Dual specificity; seri 97.6 8.3E-05 1.8E-09 71.4 6.0 72 54-128 364-441 (677)
204 cd05112 PTKc_Itk Catalytic dom 97.6 0.00097 2.1E-08 58.8 12.6 78 53-134 6-86 (256)
205 cd06611 STKc_SLK_like Catalyti 97.6 0.00063 1.4E-08 61.0 11.5 74 57-134 11-89 (280)
206 cd06654 STKc_PAK1 Catalytic do 97.6 0.0016 3.4E-08 59.2 14.2 79 52-134 21-104 (296)
207 cd05632 STKc_GRK5 Catalytic do 97.6 0.00077 1.7E-08 60.9 12.1 76 55-134 4-87 (285)
208 cd05575 STKc_SGK Catalytic dom 97.6 0.0005 1.1E-08 63.4 11.0 27 226-252 115-141 (323)
209 PHA03390 pk1 serine/threonine- 97.6 0.00094 2E-08 59.8 12.4 78 52-134 17-96 (267)
210 PHA03212 serine/threonine kina 97.6 0.00055 1.2E-08 65.2 11.4 70 55-131 96-167 (391)
211 cd06621 PKc_MAPKK_Pek1_like Ca 97.6 0.00082 1.8E-08 60.7 12.1 79 53-134 3-88 (287)
212 cd06613 STKc_MAP4K3_like Catal 97.6 0.0021 4.6E-08 56.7 14.5 77 54-134 6-87 (262)
213 cd05633 STKc_GRK3 Catalytic do 97.6 0.00071 1.5E-08 61.0 11.5 75 59-134 2-84 (279)
214 PHA03209 serine/threonine kina 97.6 0.00055 1.2E-08 64.2 11.2 71 54-131 69-141 (357)
215 cd05605 STKc_GRK4_like Catalyt 97.6 0.00075 1.6E-08 61.0 11.6 75 56-134 5-87 (285)
216 cd06629 STKc_MAPKKK_Bck1_like 97.6 0.0005 1.1E-08 61.3 10.3 75 56-134 6-95 (272)
217 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.6 0.00086 1.9E-08 60.3 11.8 78 54-134 7-95 (283)
218 cd07863 STKc_CDK4 Catalytic do 97.6 0.0012 2.6E-08 59.4 12.8 76 56-131 5-91 (288)
219 cd06633 STKc_TAO3 Catalytic do 97.6 0.0011 2.3E-08 60.9 12.6 93 36-132 6-106 (313)
220 cd06625 STKc_MEKK3_like Cataly 97.6 0.00089 1.9E-08 59.3 11.7 74 56-133 7-90 (263)
221 cd07861 STKc_CDK1_euk Catalyti 97.6 0.00096 2.1E-08 59.9 12.1 72 56-131 5-83 (285)
222 PHA03211 serine/threonine kina 97.6 0.00067 1.4E-08 66.0 11.6 69 56-131 174-244 (461)
223 cd05053 PTKc_FGFR Catalytic do 97.6 0.0013 2.9E-08 59.3 13.0 79 53-134 14-103 (293)
224 cd08217 STKc_Nek2 Catalytic do 97.6 0.00074 1.6E-08 59.6 11.1 76 56-134 5-88 (265)
225 cd07832 STKc_CCRK Catalytic do 97.6 0.00084 1.8E-08 60.2 11.5 73 56-133 5-84 (286)
226 cd05042 PTKc_Aatyk Catalytic d 97.6 0.00098 2.1E-08 59.4 11.7 73 58-134 2-82 (269)
227 cd06610 STKc_OSR1_SPAK Catalyt 97.6 0.0012 2.6E-08 58.5 12.1 75 56-134 6-86 (267)
228 cd05106 PTKc_CSF-1R Catalytic 97.6 0.00078 1.7E-08 63.7 11.5 79 53-134 40-129 (374)
229 cd06628 STKc_MAPKKK_Byr2_like 97.6 0.00097 2.1E-08 59.2 11.5 73 57-133 6-92 (267)
230 cd06917 STKc_NAK1_like Catalyt 97.6 0.00099 2.1E-08 59.6 11.6 78 56-134 6-89 (277)
231 cd08223 STKc_Nek4 Catalytic do 97.6 0.0015 3.3E-08 57.6 12.7 76 56-134 5-87 (257)
232 cd05148 PTKc_Srm_Brk Catalytic 97.6 0.001 2.2E-08 58.9 11.4 75 56-134 11-89 (261)
233 cd07876 STKc_JNK2 Catalytic do 97.6 0.00072 1.6E-08 63.3 11.0 75 55-132 25-111 (359)
234 KOG0594 Protein kinase PCTAIRE 97.6 0.00047 1E-08 62.8 9.2 148 54-260 14-175 (323)
235 cd06608 STKc_myosinIII_like Ca 97.5 0.00099 2.1E-08 59.2 11.3 76 56-133 11-95 (275)
236 cd05033 PTKc_EphR Catalytic do 97.5 0.0013 2.8E-08 58.5 12.0 77 54-134 7-92 (266)
237 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.5 0.001 2.2E-08 59.3 11.3 73 58-134 2-82 (269)
238 cd08528 STKc_Nek10 Catalytic d 97.5 0.00096 2.1E-08 59.4 11.0 27 226-252 133-159 (269)
239 cd06640 STKc_MST4 Catalytic do 97.5 0.0014 3E-08 58.8 12.0 76 55-134 8-89 (277)
240 cd05579 STKc_MAST_like Catalyt 97.5 0.0005 1.1E-08 60.7 9.0 72 59-134 1-80 (265)
241 cd05066 PTKc_EphR_A Catalytic 97.5 0.0011 2.3E-08 59.1 11.2 75 56-134 9-92 (267)
242 cd07841 STKc_CDK7 Catalytic do 97.5 0.0011 2.4E-08 60.0 11.4 73 56-133 5-87 (298)
243 cd05115 PTKc_Zap-70 Catalytic 97.5 0.0012 2.5E-08 58.7 11.3 71 59-134 3-81 (257)
244 cd07837 STKc_CdkB_plant Cataly 97.5 0.0019 4E-08 58.4 12.9 75 56-132 6-91 (295)
245 PHA03207 serine/threonine kina 97.5 0.0009 2E-08 63.6 11.2 72 54-131 95-170 (392)
246 cd05577 STKc_GRK Catalytic dom 97.5 0.00079 1.7E-08 60.4 10.3 72 59-134 1-80 (277)
247 cd05581 STKc_PDK1 Catalytic do 97.5 0.00029 6.2E-09 62.9 7.3 76 56-134 6-89 (280)
248 cd07846 STKc_CDKL2_3 Catalytic 97.5 0.0012 2.6E-08 59.2 11.5 75 55-133 5-86 (286)
249 cd06646 STKc_MAP4K5 Catalytic 97.5 0.0018 3.8E-08 57.6 12.4 77 54-134 12-93 (267)
250 KOG0575 Polo-like serine/threo 97.5 0.0012 2.6E-08 64.1 11.8 131 58-252 25-163 (592)
251 KOG3653 Transforming growth fa 97.5 0.00077 1.7E-08 63.7 10.2 185 56-298 215-411 (534)
252 cd05090 PTKc_Ror1 Catalytic do 97.5 0.0022 4.8E-08 57.6 13.1 75 56-134 10-94 (283)
253 cd07875 STKc_JNK1 Catalytic do 97.5 0.0013 2.7E-08 61.8 11.9 75 55-132 28-114 (364)
254 cd05572 STKc_cGK_PKG Catalytic 97.5 0.00087 1.9E-08 59.4 10.3 72 59-134 1-80 (262)
255 cd07844 STKc_PCTAIRE_like Cata 97.5 0.001 2.2E-08 60.0 10.9 74 54-131 8-87 (291)
256 cd05097 PTKc_DDR_like Catalyti 97.5 0.0016 3.5E-08 59.0 12.3 74 57-134 11-104 (295)
257 cd07870 STKc_PFTAIRE2 Catalyti 97.5 0.0018 3.9E-08 58.4 12.5 75 54-132 8-88 (291)
258 cd05046 PTK_CCK4 Pseudokinase 97.5 0.0021 4.6E-08 57.3 12.8 78 53-134 7-95 (275)
259 cd06623 PKc_MAPKK_plant_like C 97.5 0.0008 1.7E-08 59.5 9.9 75 56-134 6-86 (264)
260 cd06605 PKc_MAPKK Catalytic do 97.5 0.00079 1.7E-08 59.7 9.9 75 56-134 6-86 (265)
261 cd05105 PTKc_PDGFR_alpha Catal 97.5 0.0013 2.8E-08 62.9 11.9 79 53-134 39-128 (400)
262 cd06612 STKc_MST1_2 Catalytic 97.5 0.0011 2.4E-08 58.3 10.7 75 56-134 8-85 (256)
263 cd06627 STKc_Cdc7_like Catalyt 97.5 0.0017 3.6E-08 57.0 11.8 74 56-133 5-85 (254)
264 cd05123 STKc_AGC Catalytic dom 97.5 0.0015 3.2E-08 57.3 11.4 71 59-133 1-79 (250)
265 cd05065 PTKc_EphR_B Catalytic 97.5 0.0018 4E-08 57.6 12.1 76 55-134 8-92 (269)
266 cd05095 PTKc_DDR2 Catalytic do 97.5 0.0012 2.5E-08 60.0 11.0 76 55-134 9-106 (296)
267 cd05118 STKc_CMGC Catalytic do 97.5 0.0015 3.3E-08 58.3 11.6 72 56-131 4-82 (283)
268 cd06609 STKc_MST3_like Catalyt 97.5 0.0011 2.4E-08 59.3 10.5 74 57-134 7-86 (274)
269 cd07867 STKc_CDC2L6 Catalytic 97.5 0.002 4.4E-08 58.9 12.5 73 57-132 7-85 (317)
270 cd07859 STKc_TDY_MAPK_plant Ca 97.5 0.00049 1.1E-08 63.5 8.5 73 56-131 5-88 (338)
271 cd06626 STKc_MEKK4 Catalytic d 97.5 0.002 4.3E-08 57.0 12.1 75 56-134 5-86 (264)
272 cd06619 PKc_MKK5 Catalytic dom 97.5 0.00074 1.6E-08 60.7 9.4 76 55-134 5-86 (279)
273 cd06606 STKc_MAPKKK Catalytic 97.5 0.0016 3.4E-08 57.1 11.3 75 56-133 5-87 (260)
274 cd05055 PTKc_PDGFR Catalytic d 97.5 0.002 4.4E-08 58.8 12.3 79 53-134 37-126 (302)
275 cd05611 STKc_Rim15_like Cataly 97.5 0.00063 1.4E-08 60.3 8.8 75 57-134 2-84 (260)
276 cd05109 PTKc_HER2 Catalytic do 97.5 0.0027 5.9E-08 56.9 13.0 78 52-134 8-95 (279)
277 cd06648 STKc_PAK_II Catalytic 97.5 0.0024 5.2E-08 57.6 12.7 79 52-134 20-103 (285)
278 cd07836 STKc_Pho85 Catalytic d 97.5 0.0025 5.4E-08 57.1 12.8 73 55-131 4-82 (284)
279 cd05048 PTKc_Ror Catalytic Dom 97.5 0.00085 1.8E-08 60.2 9.7 77 54-134 8-95 (283)
280 cd05047 PTKc_Tie Catalytic dom 97.5 0.0013 2.9E-08 58.7 10.9 74 58-134 2-83 (270)
281 cd06607 STKc_TAO Catalytic dom 97.5 0.0017 3.7E-08 59.2 11.9 90 39-132 3-100 (307)
282 cd06655 STKc_PAK2 Catalytic do 97.5 0.0053 1.1E-07 55.8 15.0 77 53-133 21-102 (296)
283 KOG0585 Ca2+/calmodulin-depend 97.4 0.0012 2.5E-08 62.7 10.5 75 56-133 102-196 (576)
284 cd05630 STKc_GRK6 Catalytic do 97.4 0.0019 4E-08 58.4 11.8 75 56-134 5-87 (285)
285 smart00221 STYKc Protein kinas 97.4 0.0022 4.7E-08 55.0 11.7 74 56-133 4-83 (225)
286 cd05094 PTKc_TrkC Catalytic do 97.4 0.0032 6.9E-08 56.9 13.4 75 56-134 10-94 (291)
287 cd05050 PTKc_Musk Catalytic do 97.4 0.0024 5.1E-08 57.6 12.4 77 54-134 8-95 (288)
288 cd08218 STKc_Nek1 Catalytic do 97.4 0.0019 4.2E-08 56.9 11.6 75 56-134 5-86 (256)
289 cd06642 STKc_STK25-YSK1 Cataly 97.4 0.0012 2.6E-08 59.2 10.3 73 57-133 10-88 (277)
290 cd05101 PTKc_FGFR2 Catalytic d 97.4 0.0028 6E-08 57.7 12.8 77 55-134 19-108 (304)
291 cd05098 PTKc_FGFR1 Catalytic d 97.4 0.0032 6.9E-08 57.5 13.2 78 54-134 21-111 (307)
292 cd05578 STKc_Yank1 Catalytic d 97.4 0.0012 2.6E-08 58.3 10.1 75 56-134 5-87 (258)
293 cd08221 STKc_Nek9 Catalytic do 97.4 0.0018 4E-08 57.0 11.3 75 55-133 4-85 (256)
294 cd05061 PTKc_InsR Catalytic do 97.4 0.0012 2.5E-08 59.7 10.1 76 55-134 10-96 (288)
295 cd05092 PTKc_TrkA Catalytic do 97.4 0.0012 2.7E-08 59.3 10.2 78 53-134 7-94 (280)
296 cd07868 STKc_CDK8 Catalytic do 97.4 0.0025 5.4E-08 58.4 12.3 73 57-132 7-85 (317)
297 cd05108 PTKc_EGFR Catalytic do 97.4 0.0026 5.7E-08 58.3 12.5 78 52-134 8-95 (316)
298 cd06643 STKc_SLK Catalytic dom 97.4 0.004 8.7E-08 55.9 13.5 74 57-134 11-89 (282)
299 cd06622 PKc_MAPKK_PBS2_like Ca 97.4 0.0024 5.1E-08 57.5 11.9 75 56-134 6-86 (286)
300 cd05099 PTKc_FGFR4 Catalytic d 97.4 0.004 8.7E-08 57.0 13.5 80 52-134 13-105 (314)
301 KOG0198 MEKK and related serin 97.4 0.0026 5.6E-08 58.4 11.9 73 55-133 21-102 (313)
302 cd06620 PKc_MAPKK_Byr1_like Ca 97.4 0.00082 1.8E-08 60.5 8.7 75 56-134 10-90 (284)
303 cd07874 STKc_JNK3 Catalytic do 97.4 0.002 4.3E-08 60.2 11.5 75 55-132 21-107 (355)
304 cd08229 STKc_Nek7 Catalytic do 97.4 0.00095 2.1E-08 59.3 8.9 74 57-134 8-89 (267)
305 cd07847 STKc_CDKL1_4 Catalytic 97.4 0.0022 4.7E-08 57.5 11.3 73 56-132 6-85 (286)
306 cd07853 STKc_NLK Catalytic dom 97.4 0.0023 5E-08 60.2 11.9 73 56-131 5-88 (372)
307 cd06632 STKc_MEKK1_plant Catal 97.4 0.0034 7.4E-08 55.2 12.4 73 57-133 6-88 (258)
308 cd07833 STKc_CDKL Catalytic do 97.4 0.0022 4.8E-08 57.6 11.3 73 56-132 6-85 (288)
309 cd07839 STKc_CDK5 Catalytic do 97.4 0.0018 3.8E-08 58.2 10.6 72 56-131 5-83 (284)
310 cd07835 STKc_CDK1_like Catalyt 97.4 0.0022 4.8E-08 57.5 11.2 72 56-131 4-82 (283)
311 cd05045 PTKc_RET Catalytic dom 97.4 0.0033 7.2E-08 56.7 12.4 74 57-134 6-90 (290)
312 cd05060 PTKc_Syk_like Catalyti 97.4 0.0037 8E-08 55.3 12.5 72 58-134 2-82 (257)
313 cd05116 PTKc_Syk Catalytic dom 97.4 0.0033 7.2E-08 55.6 12.1 72 58-134 2-82 (257)
314 cd05054 PTKc_VEGFR Catalytic d 97.3 0.0035 7.5E-08 58.3 12.7 77 56-134 12-99 (337)
315 cd05037 PTK_Jak_rpt1 Pseudokin 97.3 0.0029 6.3E-08 55.7 11.7 72 58-134 2-87 (259)
316 KOG0600 Cdc2-related protein k 97.3 0.0016 3.5E-08 62.1 10.3 138 53-252 119-263 (560)
317 cd07842 STKc_CDK8_like Catalyt 97.3 0.0033 7.2E-08 57.3 12.1 74 56-132 5-89 (316)
318 cd05062 PTKc_IGF-1R Catalytic 97.3 0.0014 3E-08 58.8 9.4 75 56-134 11-96 (277)
319 cd06652 STKc_MEKK2 Catalytic d 97.3 0.0019 4.2E-08 57.3 10.3 75 56-133 7-92 (265)
320 cd05063 PTKc_EphR_A2 Catalytic 97.3 0.0033 7.1E-08 55.9 11.8 78 53-134 7-93 (268)
321 PTZ00284 protein kinase; Provi 97.3 0.0031 6.7E-08 61.4 12.5 77 55-131 133-216 (467)
322 cd06635 STKc_TAO1 Catalytic do 97.3 0.0047 1E-07 56.7 13.1 91 38-132 12-110 (317)
323 cd05089 PTKc_Tie1 Catalytic do 97.3 0.0062 1.4E-07 55.2 13.6 76 56-134 7-90 (297)
324 cd05057 PTKc_EGFR_like Catalyt 97.3 0.0038 8.3E-08 55.9 12.1 78 52-134 8-95 (279)
325 cd06659 STKc_PAK6 Catalytic do 97.3 0.0035 7.7E-08 57.0 12.0 74 56-133 26-104 (297)
326 cd05035 PTKc_Axl_like Catalyti 97.3 0.0046 1E-07 54.9 12.4 75 57-134 5-94 (273)
327 cd06637 STKc_TNIK Catalytic do 97.3 0.0025 5.5E-08 56.7 10.5 77 56-134 11-96 (272)
328 KOG0616 cAMP-dependent protein 97.3 0.0025 5.4E-08 57.1 10.0 133 55-252 48-189 (355)
329 cd07840 STKc_CDK9_like Catalyt 97.3 0.0041 8.9E-08 55.6 11.9 73 56-131 4-84 (287)
330 cd05086 PTKc_Aatyk2 Catalytic 97.3 0.004 8.6E-08 55.6 11.6 73 58-134 2-82 (268)
331 cd05064 PTKc_EphR_A10 Catalyti 97.3 0.0034 7.3E-08 56.0 11.2 75 56-134 10-93 (266)
332 cd05606 STKc_beta_ARK Catalyti 97.3 0.0047 1E-07 55.5 12.1 75 59-134 2-84 (278)
333 PTZ00283 serine/threonine prot 97.3 0.0023 4.9E-08 63.0 10.8 27 226-252 162-188 (496)
334 cd05056 PTKc_FAK Catalytic dom 97.3 0.0063 1.4E-07 54.2 12.8 75 55-134 10-93 (270)
335 PTZ00024 cyclin-dependent prot 97.2 0.0012 2.6E-08 61.1 8.3 70 58-131 16-104 (335)
336 cd07860 STKc_CDK2_3 Catalytic 97.2 0.0046 1E-07 55.4 12.0 73 55-131 4-83 (284)
337 cd07830 STKc_MAK_like Catalyti 97.2 0.0034 7.3E-08 56.3 11.0 73 56-131 4-82 (283)
338 cd08530 STKc_CNK2-like Catalyt 97.2 0.0028 6.1E-08 55.7 10.3 75 56-134 5-86 (256)
339 cd06617 PKc_MKK3_6 Catalytic d 97.2 0.0047 1E-07 55.3 12.0 74 55-131 5-84 (283)
340 cd06651 STKc_MEKK3 Catalytic d 97.2 0.005 1.1E-07 54.8 12.0 76 56-134 7-93 (266)
341 KOG0668 Casein kinase II, alph 97.2 0.00026 5.6E-09 61.2 3.3 100 31-132 12-120 (338)
342 KOG0587 Traf2- and Nck-interac 97.2 0.004 8.6E-08 63.1 12.0 76 56-133 24-107 (953)
343 PTZ00036 glycogen synthase kin 97.2 0.0058 1.3E-07 59.1 13.1 79 53-132 68-152 (440)
344 cd08225 STKc_Nek5 Catalytic do 97.2 0.0029 6.3E-08 55.7 10.2 75 56-134 5-86 (257)
345 cd06636 STKc_MAP4K4_6 Catalyti 97.2 0.0043 9.2E-08 55.7 11.4 77 56-134 21-106 (282)
346 KOG0612 Rho-associated, coiled 97.2 0.00032 7E-09 72.5 4.3 135 56-254 80-222 (1317)
347 cd06647 STKc_PAK_I Catalytic d 97.2 0.006 1.3E-07 55.3 12.3 77 54-134 22-103 (293)
348 cd07838 STKc_CDK4_6_like Catal 97.2 0.0061 1.3E-07 54.6 12.3 76 56-131 4-90 (287)
349 cd07878 STKc_p38beta_MAPK11 Ca 97.2 0.0037 8E-08 58.0 11.1 75 55-129 19-102 (343)
350 cd06657 STKc_PAK4 Catalytic do 97.2 0.0032 6.9E-08 57.2 10.5 75 56-134 25-104 (292)
351 cd05051 PTKc_DDR Catalytic dom 97.2 0.0036 7.7E-08 56.5 10.7 75 56-134 10-106 (296)
352 cd05044 PTKc_c-ros Catalytic d 97.2 0.0029 6.2E-08 56.2 9.9 73 58-134 2-86 (269)
353 cd05093 PTKc_TrkB Catalytic do 97.2 0.0042 9.1E-08 56.0 11.1 77 54-134 8-94 (288)
354 cd05100 PTKc_FGFR3 Catalytic d 97.2 0.0094 2E-07 55.1 13.7 76 56-134 17-105 (334)
355 cd08227 PK_STRAD_alpha Pseudok 97.2 0.0037 8.1E-08 57.6 10.9 73 58-134 5-86 (327)
356 cd05036 PTKc_ALK_LTK Catalytic 97.2 0.0083 1.8E-07 53.7 12.9 78 53-134 8-96 (277)
357 cd05107 PTKc_PDGFR_beta Cataly 97.2 0.0045 9.7E-08 59.2 11.7 77 55-134 41-128 (401)
358 TIGR02569 TIGR02569_actnb cons 97.2 0.024 5.2E-07 50.0 14.9 214 56-298 18-249 (272)
359 cd06653 STKc_MEKK3_like_1 Cata 97.2 0.0043 9.3E-08 55.1 10.8 76 56-134 7-93 (264)
360 cd07831 STKc_MOK Catalytic dom 97.2 0.0049 1.1E-07 55.1 11.3 74 56-131 4-84 (282)
361 PHA02988 hypothetical protein; 97.2 0.0059 1.3E-07 55.2 11.8 75 57-134 26-109 (283)
362 PTZ00266 NIMA-related protein 97.2 0.0046 9.9E-08 64.9 12.3 78 54-134 16-101 (1021)
363 cd08220 STKc_Nek8 Catalytic do 97.2 0.0052 1.1E-07 54.0 11.2 76 55-134 4-86 (256)
364 cd05077 PTK_Jak1_rpt1 Pseudoki 97.2 0.0069 1.5E-07 53.9 12.0 73 58-134 2-91 (262)
365 cd07845 STKc_CDK10 Catalytic d 97.1 0.0048 1E-07 56.3 11.1 75 54-131 10-92 (309)
366 KOG0667 Dual-specificity tyros 97.1 0.0054 1.2E-07 60.1 11.8 145 56-260 191-346 (586)
367 cd06645 STKc_MAP4K3 Catalytic 97.1 0.0056 1.2E-07 54.4 11.3 75 56-134 14-93 (267)
368 KOG1163 Casein kinase (serine/ 97.1 0.0062 1.3E-07 53.3 10.8 75 52-129 16-93 (341)
369 cd07850 STKc_JNK Catalytic dom 97.1 0.0068 1.5E-07 56.6 12.0 75 54-131 19-105 (353)
370 cd05040 PTKc_Ack_like Catalyti 97.1 0.0097 2.1E-07 52.4 12.5 72 58-134 2-82 (257)
371 cd06624 STKc_ASK Catalytic dom 97.1 0.013 2.9E-07 52.0 13.4 75 56-134 13-92 (268)
372 cd06658 STKc_PAK5 Catalytic do 97.1 0.0048 1E-07 56.0 10.6 74 56-133 27-105 (292)
373 PLN00009 cyclin-dependent kina 97.1 0.006 1.3E-07 55.1 11.2 73 55-131 6-85 (294)
374 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.1 0.0055 1.2E-07 55.0 10.5 54 76-133 46-102 (274)
375 cd06630 STKc_MEKK1 Catalytic d 97.1 0.0063 1.4E-07 53.9 10.7 74 57-134 6-90 (268)
376 cd05111 PTK_HER3 Pseudokinase 97.0 0.015 3.2E-07 52.2 13.2 27 226-252 128-154 (279)
377 cd06618 PKc_MKK7 Catalytic dom 97.0 0.0058 1.3E-07 55.4 10.5 76 53-131 17-98 (296)
378 cd05091 PTKc_Ror2 Catalytic do 97.0 0.0091 2E-07 53.5 11.5 74 56-133 10-94 (283)
379 cd07855 STKc_ERK5 Catalytic do 97.0 0.0023 5E-08 59.2 7.8 76 56-131 10-92 (334)
380 cd07880 STKc_p38gamma_MAPK12 C 97.0 0.011 2.4E-07 54.9 12.4 76 54-129 18-102 (343)
381 KOG0578 p21-activated serine/t 97.0 0.0031 6.6E-08 60.9 8.4 94 35-134 253-357 (550)
382 cd06616 PKc_MKK4 Catalytic dom 97.0 0.01 2.2E-07 53.3 11.7 73 56-131 9-87 (288)
383 cd07843 STKc_CDC2L1 Catalytic 97.0 0.0054 1.2E-07 55.4 9.8 73 56-131 10-90 (293)
384 cd07849 STKc_ERK1_2_like Catal 97.0 0.0098 2.1E-07 55.1 11.7 74 55-131 9-92 (336)
385 cd07865 STKc_CDK9 Catalytic do 97.0 0.011 2.3E-07 53.7 11.5 77 55-131 16-103 (310)
386 cd07866 STKc_BUR1 Catalytic do 96.9 0.013 2.8E-07 53.2 12.0 75 54-131 11-99 (311)
387 cd05075 PTKc_Axl Catalytic dom 96.9 0.012 2.7E-07 52.2 11.6 75 57-134 5-93 (272)
388 cd07856 STKc_Sty1_Hog1 Catalyt 96.9 0.013 2.7E-07 54.3 11.9 74 55-131 14-94 (328)
389 KOG0577 Serine/threonine prote 96.9 0.00093 2E-08 65.0 4.2 160 35-260 10-180 (948)
390 cd05032 PTKc_InsR_like Catalyt 96.9 0.021 4.4E-07 50.9 12.7 77 54-134 9-96 (277)
391 KOG0197 Tyrosine kinases [Sign 96.9 0.0038 8.2E-08 59.7 8.1 143 56-260 211-358 (468)
392 cd05058 PTKc_Met_Ron Catalytic 96.9 0.017 3.6E-07 51.1 11.9 74 58-134 2-84 (262)
393 KOG0607 MAP kinase-interacting 96.9 0.0025 5.4E-08 57.8 6.4 65 76-153 105-172 (463)
394 cd07829 STKc_CDK_like Catalyti 96.8 0.012 2.5E-07 52.6 10.7 72 56-131 4-82 (282)
395 cd08216 PK_STRAD Pseudokinase 96.8 0.013 2.8E-07 53.5 11.1 59 72-134 23-86 (314)
396 cd08226 PK_STRAD_beta Pseudoki 96.8 0.01 2.2E-07 54.7 10.5 68 62-133 11-85 (328)
397 cd07834 STKc_MAPK Catalytic do 96.8 0.0048 1E-07 56.8 8.1 73 56-131 5-88 (330)
398 KOG0032 Ca2+/calmodulin-depend 96.8 0.0076 1.6E-07 57.1 9.5 75 57-134 41-123 (382)
399 KOG0663 Protein kinase PITSLRE 96.8 0.0066 1.4E-07 55.4 8.4 143 55-259 80-231 (419)
400 KOG1164 Casein kinase (serine/ 96.8 0.015 3.2E-07 53.8 11.2 75 55-129 22-103 (322)
401 cd05576 STKc_RPK118_like Catal 96.8 0.006 1.3E-07 53.4 8.1 27 226-252 104-130 (237)
402 cd05110 PTKc_HER4 Catalytic do 96.8 0.02 4.3E-07 52.1 11.6 77 53-134 9-95 (303)
403 PHA03210 serine/threonine kina 96.8 0.0027 5.8E-08 62.5 6.2 27 226-252 286-312 (501)
404 KOG1151 Tousled-like protein k 96.7 0.0058 1.3E-07 57.7 7.9 74 58-134 470-555 (775)
405 KOG0591 NIMA (never in mitosis 96.7 0.0012 2.7E-08 58.7 2.9 71 57-133 25-106 (375)
406 PF07714 Pkinase_Tyr: Protein 96.7 0.018 4E-07 51.1 10.6 76 55-134 3-88 (259)
407 cd07864 STKc_CDK12 Catalytic d 96.7 0.023 5.1E-07 51.3 11.4 74 56-132 12-101 (302)
408 cd07857 STKc_MPK1 Catalytic do 96.7 0.028 6.2E-07 51.8 12.0 74 56-131 5-90 (332)
409 cd05043 PTK_Ryk Pseudokinase d 96.7 0.039 8.5E-07 49.3 12.6 75 56-133 11-95 (280)
410 cd05078 PTK_Jak2_Jak3_rpt1 Pse 96.6 0.011 2.3E-07 52.4 8.8 74 57-134 1-86 (258)
411 cd06634 STKc_TAO2 Catalytic do 96.6 0.016 3.5E-07 52.9 10.2 74 55-132 19-100 (308)
412 KOG4236 Serine/threonine prote 96.6 0.0087 1.9E-07 57.7 8.4 92 36-132 550-648 (888)
413 PHA02882 putative serine/threo 96.6 0.022 4.7E-07 51.7 10.7 27 226-252 145-171 (294)
414 KOG2052 Activin A type IB rece 96.6 0.029 6.2E-07 53.1 11.2 144 52-252 212-361 (513)
415 cd07852 STKc_MAPK15 Catalytic 96.6 0.023 4.9E-07 52.6 10.8 73 57-131 13-93 (337)
416 PLN03225 Serine/threonine-prot 96.5 0.022 4.8E-07 57.0 11.1 27 226-252 274-301 (566)
417 PLN00113 leucine-rich repeat r 96.5 0.024 5.3E-07 60.3 12.0 74 56-134 695-770 (968)
418 smart00220 S_TKc Serine/Threon 96.5 0.031 6.8E-07 48.1 10.7 65 65-133 3-73 (244)
419 KOG0659 Cdk activating kinase 96.5 0.023 5E-07 50.3 9.5 74 55-132 6-86 (318)
420 PLN03224 probable serine/threo 96.5 0.058 1.3E-06 53.1 13.4 27 226-252 328-354 (507)
421 KOG0593 Predicted protein kina 96.5 0.017 3.6E-07 52.2 8.6 148 56-267 7-167 (396)
422 KOG1166 Mitotic checkpoint ser 96.5 0.018 3.8E-07 60.2 10.0 78 54-134 700-781 (974)
423 cd07858 STKc_TEY_MAPK_plant Ca 96.4 0.015 3.2E-07 53.9 8.7 73 56-131 10-93 (337)
424 cd07851 STKc_p38 Catalytic dom 96.4 0.025 5.4E-07 52.6 10.1 78 53-130 17-103 (343)
425 cd07877 STKc_p38alpha_MAPK14 C 96.3 0.066 1.4E-06 49.8 12.5 50 53-102 19-75 (345)
426 KOG0611 Predicted serine/threo 96.3 0.01 2.3E-07 55.4 6.7 71 225-297 171-246 (668)
427 cd07879 STKc_p38delta_MAPK13 C 96.3 0.059 1.3E-06 50.0 12.0 75 54-131 18-104 (342)
428 COG2112 Predicted Ser/Thr prot 96.3 0.0081 1.8E-07 50.3 5.2 75 53-134 24-99 (201)
429 KOG0193 Serine/threonine prote 96.3 0.021 4.5E-07 56.0 8.6 136 52-252 393-533 (678)
430 KOG0588 Serine/threonine prote 96.2 0.024 5.1E-07 56.2 8.8 72 59-134 20-99 (786)
431 cd07854 STKc_MAPK4_6 Catalytic 96.1 0.08 1.7E-06 49.1 11.7 77 52-131 6-100 (342)
432 PF10707 YrbL-PhoP_reg: PhoP r 96.0 0.12 2.6E-06 44.4 11.4 77 54-132 4-102 (199)
433 cd05074 PTKc_Tyro3 Catalytic d 96.0 0.12 2.7E-06 45.7 11.9 74 57-133 5-93 (273)
434 KOG0586 Serine/threonine prote 95.9 0.045 9.8E-07 53.6 9.3 74 56-133 61-141 (596)
435 cd08222 STKc_Nek11 Catalytic d 95.9 0.054 1.2E-06 47.8 9.3 74 57-134 6-89 (260)
436 KOG1167 Serine/threonine prote 95.9 0.04 8.6E-07 51.6 8.3 78 52-132 37-120 (418)
437 COG3281 Ble Uncharacterized pr 95.8 0.042 9.2E-07 50.4 8.1 38 227-265 285-332 (438)
438 KOG0582 Ste20-like serine/thre 95.8 0.13 2.9E-06 48.8 11.3 72 56-133 31-110 (516)
439 KOG2269 Serine/threonine prote 95.7 0.025 5.5E-07 51.9 6.0 37 91-133 333-369 (531)
440 KOG0597 Serine-threonine prote 95.4 0.048 1E-06 53.3 7.2 132 56-252 7-145 (808)
441 KOG1094 Discoidin domain recep 95.4 0.042 9.1E-07 53.8 6.8 81 49-133 536-621 (807)
442 KOG1152 Signal transduction se 95.3 0.18 3.8E-06 49.6 10.6 150 53-263 563-728 (772)
443 KOG0694 Serine/threonine prote 95.0 0.2 4.4E-06 49.8 10.4 134 56-253 373-514 (694)
444 KOG4721 Serine/threonine prote 94.9 0.065 1.4E-06 52.4 6.4 72 52-133 125-198 (904)
445 KOG2345 Serine/threonine prote 94.8 0.052 1.1E-06 47.7 5.1 30 224-253 146-175 (302)
446 KOG0579 Ste20-like serine/thre 94.4 0.024 5.2E-07 56.0 2.2 28 225-252 148-175 (1187)
447 cd05124 AFK Actin-Fragmin Kina 94.0 0.15 3.2E-06 44.5 6.0 73 56-134 4-104 (238)
448 KOG0662 Cyclin-dependent kinas 93.9 0.22 4.7E-06 41.8 6.7 73 55-131 6-85 (292)
449 KOG0658 Glycogen synthase kina 93.9 0.034 7.3E-07 51.2 2.0 49 52-101 25-75 (364)
450 KOG0589 Serine/threonine prote 93.6 0.36 7.8E-06 46.1 8.5 72 56-133 9-90 (426)
451 KOG0984 Mitogen-activated prot 93.5 0.044 9.6E-07 47.0 1.9 28 225-252 167-194 (282)
452 KOG0666 Cyclin C-dependent kin 93.4 0.32 6.9E-06 44.4 7.3 73 56-131 29-112 (438)
453 KOG0580 Serine/threonine prote 93.2 0.13 2.9E-06 45.0 4.4 29 224-252 141-169 (281)
454 KOG4278 Protein tyrosine kinas 92.9 0.39 8.4E-06 47.7 7.5 74 56-133 272-349 (1157)
455 PF09192 Act-Frag_cataly: Acti 92.8 0.49 1.1E-05 42.4 7.6 77 52-134 26-135 (275)
456 KOG0603 Ribosomal protein S6 k 92.5 0.17 3.6E-06 50.0 4.5 41 207-252 420-461 (612)
457 PF10009 DUF2252: Uncharacteri 92.4 0.17 3.8E-06 48.0 4.5 60 223-282 40-120 (385)
458 KOG0670 U4/U6-associated splic 91.9 0.053 1.1E-06 52.4 0.4 29 225-253 554-583 (752)
459 KOG0599 Phosphorylase kinase g 91.7 0.18 3.8E-06 45.2 3.3 39 225-263 141-183 (411)
460 KOG0664 Nemo-like MAPK-related 91.4 0.21 4.6E-06 44.6 3.5 28 225-252 174-201 (449)
461 KOG4279 Serine/threonine prote 91.1 2.6 5.5E-05 42.8 10.9 71 59-134 583-659 (1226)
462 PF13575 DUF4135: Domain of un 90.8 3.4 7.4E-05 39.0 11.4 74 52-133 44-126 (370)
463 KOG1026 Nerve growth factor re 90.5 0.88 1.9E-05 46.5 7.3 78 52-133 487-575 (774)
464 KOG0983 Mitogen-activated prot 90.3 0.21 4.5E-06 44.8 2.5 28 225-252 210-237 (391)
465 PF07387 Seadorna_VP7: Seadorn 90.2 0.21 4.7E-06 43.6 2.4 30 224-253 160-189 (308)
466 KOG0584 Serine/threonine prote 90.1 1.3 2.8E-05 43.9 7.9 81 207-307 148-239 (632)
467 KOG1165 Casein kinase (serine/ 89.5 2.1 4.5E-05 39.6 8.2 66 58-127 35-104 (449)
468 KOG0194 Protein tyrosine kinas 89.0 2.2 4.7E-05 41.6 8.5 74 56-133 162-247 (474)
469 KOG1035 eIF-2alpha kinase GCN2 89.0 0.22 4.7E-06 52.9 1.8 50 53-102 481-536 (1351)
470 KOG4645 MAPKKK (MAP kinase kin 88.5 0.72 1.6E-05 49.5 5.1 29 225-253 1352-1380(1509)
471 KOG1095 Protein tyrosine kinas 88.1 6.2 0.00013 42.0 11.6 79 52-134 693-782 (1025)
472 KOG4158 BRPK/PTEN-induced prot 87.8 0.54 1.2E-05 44.4 3.4 34 225-258 359-396 (598)
473 KOG1006 Mitogen-activated prot 87.8 0.32 6.9E-06 43.5 1.8 27 226-252 187-213 (361)
474 KOG0660 Mitogen-activated prot 87.5 0.32 6.9E-06 44.9 1.7 28 225-252 143-170 (359)
475 PLN00181 protein SPA1-RELATED; 87.3 0.78 1.7E-05 47.9 4.8 28 225-252 98-125 (793)
476 KOG1240 Protein kinase contain 86.7 3 6.5E-05 44.5 8.3 44 39-84 13-56 (1431)
477 KOG0199 ACK and related non-re 85.9 0.6 1.3E-05 47.1 2.8 137 53-252 112-257 (1039)
478 PHA00451 protein kinase 85.1 0.68 1.5E-05 41.2 2.5 29 231-259 193-221 (362)
479 KOG0604 MAP kinase-activated p 84.4 1.3 2.9E-05 40.2 4.0 76 55-134 66-146 (400)
480 KOG1290 Serine/threonine prote 83.4 8.1 0.00018 37.6 8.9 49 56-104 83-135 (590)
481 COG5072 ALK1 Serine/threonine 83.2 2.4 5.3E-05 39.9 5.3 29 224-253 339-367 (488)
482 KOG0033 Ca2+/calmodulin-depend 81.9 0.79 1.7E-05 40.5 1.6 71 59-133 19-96 (355)
483 PF14531 Kinase-like: Kinase-l 81.3 0.93 2E-05 41.2 1.9 33 51-83 12-46 (288)
484 KOG0695 Serine/threonine prote 81.1 5.8 0.00013 36.7 6.8 43 225-267 369-412 (593)
485 PF12260 PIP49_C: Protein-kina 80.7 15 0.00031 31.2 8.9 36 92-134 8-43 (188)
486 KOG0986 G protein-coupled rece 79.6 7.5 0.00016 37.5 7.2 160 30-251 149-331 (591)
487 KOG0574 STE20-like serine/thre 79.0 1.6 3.6E-05 39.6 2.6 74 56-133 38-114 (502)
488 KOG0661 MAPK related serine/th 77.8 3.3 7.2E-05 40.0 4.4 57 204-265 112-172 (538)
489 KOG0665 Jun-N-terminal kinase 77.7 1.4 2.9E-05 40.4 1.7 28 225-252 136-163 (369)
490 KOG0669 Cyclin T-dependent kin 74.9 1.4 3.1E-05 39.1 1.1 28 225-252 142-169 (376)
491 KOG1236 Predicted unusual prot 74.5 1.6 3.4E-05 41.8 1.3 24 227-250 365-392 (565)
492 COG4320 Uncharacterized protei 72.3 20 0.00043 33.0 7.6 61 223-283 55-136 (410)
493 PF07805 HipA_N: HipA-like N-t 72.2 16 0.00035 26.0 6.0 50 76-128 28-78 (81)
494 KOG0590 Checkpoint kinase and 68.5 3.5 7.6E-05 41.6 2.3 29 224-252 437-465 (601)
495 smart00146 PI3Kc Phosphoinosit 67.0 4.6 9.9E-05 34.7 2.5 27 228-254 103-129 (202)
496 cd05172 PIKKc_DNA-PK DNA-depen 65.2 4.6 0.0001 35.6 2.2 32 225-256 135-167 (235)
497 PF03109 ABC1: ABC1 family; I 64.6 3.8 8.2E-05 32.0 1.4 48 56-103 16-64 (119)
498 KOG4257 Focal adhesion tyrosin 63.4 27 0.00058 35.4 7.1 70 58-132 396-475 (974)
499 KOG1027 Serine/threonine prote 62.2 9.1 0.0002 39.6 3.8 42 206-252 610-656 (903)
500 cd05170 PIKKc_SMG1 Suppressor 61.8 5.6 0.00012 36.6 2.2 32 225-256 208-240 (307)
No 1
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=100.00 E-value=9.8e-54 Score=385.75 Aligned_cols=283 Identities=46% Similarity=0.796 Sum_probs=213.3
Q ss_pred hhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecc
Q 020294 37 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 115 (328)
Q Consensus 37 ~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~ 115 (328)
++.|.+.|.+. +.+.+|+++++++||..|.+|+++++.++||||+++.....+++.|++.|+.|++..++.||+|+..+
T Consensus 2 w~~i~~~~~~~~~~~~~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G 81 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWG 81 (288)
T ss_dssp HHHHHHHHHHHHTS-----EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEE
T ss_pred hHHHHHHHHHHhCCCCceeeeEecCCCChhheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 56788899887 66678999999999999999999988889999999865678899999999999887789999999998
Q ss_pred ccCCCceEEEEeeecCCCC-CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHH
Q 020294 116 ALPTGGSYIIMEFIEFGSS-RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 194 (328)
Q Consensus 116 ~~~~~~~~~v~e~l~G~~~-~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~ 194 (328)
.. .+..|+||||++.+.. ...++++|+.||+||+... .+.|||+.++++|.+||.|+|.++|.+||.++|+.++++.
T Consensus 82 ~~-~~~~fLlle~l~~~~~~~~~~~~lg~~LA~LH~~~~-~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~ 159 (288)
T PF03881_consen 82 EY-DDDAFLLLEFLEMGSPSPPDWEELGRQLAALHQWSP-AGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLEL 159 (288)
T ss_dssp E--SSCCEEEEE--------CCHHHHHHHHHHHHHH-T---SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHH
T ss_pred ee-cCCceEEEEeecCCCCCchhHHHHHHHHHHHhhhcC-CCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 76 4567999999999843 4789999999999999322 2469999999999999999999999999998899999988
Q ss_pred HHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh-hhcCCChh
Q 020294 195 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS 273 (328)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~-~~~~~~~~ 273 (328)
+.+.+... ..++++.+++...+..+..+|+|||||||+||++++.++.++|||+.+++||+|+|||++ .+++|+++
T Consensus 160 ~~~~~~~~---~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa~yygh~E~DLam~~lfggf~~~ 236 (288)
T PF03881_consen 160 AREKGGLD---AELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPACYYGHREVDLAMTRLFGGFPDE 236 (288)
T ss_dssp HHHCTSS----CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S---EEE-CHHHHHHHCCCSTTHHH
T ss_pred HHhhCCch---hHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecCCCCceeeccccccCchHhhhhhhhhhCCCCHH
Confidence 87765432 345566666666676556789999999999999999998899999999999999999987 56889999
Q ss_pred hHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020294 274 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324 (328)
Q Consensus 274 f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~ 324 (328)
|+++|.+..|++++|++|..+|+||++|+|.++||++|+.+++++|+++++
T Consensus 237 f~~~Y~~~~Pl~~g~~~R~~lY~Ly~lL~H~~lFG~~Y~~~~~~~l~~ll~ 287 (288)
T PF03881_consen 237 FYDAYQEHYPLSEGWEDRNPLYQLYHLLNHLNLFGGSYRSQVRRILKRLLS 287 (288)
T ss_dssp HHHHHHHHS---TTHHHHHHHHHHHHHHHHHHHC-GCHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999986
No 2
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=4.5e-52 Score=351.34 Aligned_cols=281 Identities=39% Similarity=0.681 Sum_probs=254.3
Q ss_pred hhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecc
Q 020294 37 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 115 (328)
Q Consensus 37 ~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~ 115 (328)
++.|.+.|.+. |.+ +|...+++.||..|..|+|.++..+||||.+......++.+|+..|+.|++...+.||+|+..+
T Consensus 2 w~~i~~qlse~~g~~-~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G 80 (286)
T COG3001 2 WQAISQQLSEQLGEG-EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKVIAVG 80 (286)
T ss_pred hHHHHHHHHHHhCch-hhhcccccCCccccceeEeecCCcceEEEecchhhHHHHHHHHHHHHHHHhcCCccccceEEec
Confidence 45667777776 766 8999999999999999999998889999999876667899999999999998779999999998
Q ss_pred ccCCCceEEEEeeecCCCCC-ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHH
Q 020294 116 ALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 194 (328)
Q Consensus 116 ~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~ 194 (328)
.. .+..|+||||++-++.. ..+..+|+.||+||++... ..||++.++.+|.+||.|.|.++|..||.++|+.++++.
T Consensus 81 ~~-~~~sylVle~L~~~~~d~~~~~~~GqqLA~LH~~~~~-~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlql 158 (286)
T COG3001 81 AS-RDHSYLVLEYLPTGPLDAHSAFILGQQLARLHQWGGQ-AQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQL 158 (286)
T ss_pred CC-CCeeEEEEeeccCCCCCchhHHHHHHHHHHHHhhcCc-cccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHH
Confidence 76 57889999999998775 5689999999999999985 479999999999999999999999999999999999998
Q ss_pred HHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh-hhcCCChh
Q 020294 195 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS 273 (328)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~-~~~~~~~~ 273 (328)
+.+++.+.. .++.+++.+++++.++++.|+|+|||||++|..+..+| ++++|+.|.+||++.||||+ .+++|..+
T Consensus 159 ar~rg~~f~---did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fDPA~y~GDrE~Dlam~elFggfp~e 234 (286)
T COG3001 159 ARERGLTFG---DIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPE 234 (286)
T ss_pred HHHhCCCcc---CHHHHHHHHHHHHhcCCCCcceeecccccccccccCCC-CeeeccccccCCcccceehhhhhcCCcHH
Confidence 888766432 24666777788888888889999999999999999998 99999999999999999998 57899999
Q ss_pred hHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020294 274 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 324 (328)
Q Consensus 274 f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~ 324 (328)
|+++|.++.|++++|++|..+|.||++++|.+.||+.|.+.+..+|++.|+
T Consensus 235 fy~gY~sv~PL~~G~~eRk~iYqLY~llnh~~~FGg~Y~~~a~k~i~~iL~ 285 (286)
T COG3001 235 FYDGYQSVSPLPAGYLERKPIYQLYHLLNHANLFGGHYLVEAQKSIDRILS 285 (286)
T ss_pred HHHhhhccCCCCCchHHHhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999875
No 3
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=100.00 E-value=2.1e-52 Score=349.24 Aligned_cols=288 Identities=48% Similarity=0.859 Sum_probs=259.5
Q ss_pred HHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294 41 REWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 120 (328)
Q Consensus 41 ~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~ 120 (328)
+++|.....-..+..+-.+++|+.+..--.+|+.|++|||.++...+++++.|.+.|+++.+...+.||+|+.+...+.|
T Consensus 2 ee~l~ael~~~~vr~~gs~gggcI~~~r~ydtDaG~~FvK~nr~~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~G 81 (313)
T KOG3021|consen 2 EELLRAELGLNNVRALGSVGGGCISDGRHYDTDAGKVFVKVNRSIARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGG 81 (313)
T ss_pred hHHHHHhcCcceeeeecCCCCceeccccccccCCccEEEEeccccchHHHhhHHHHHHHHHhcCceecCCceeeEecCCC
Confidence 45666662223777788889999998888899999999999998888999999999999999888999999999887788
Q ss_pred ceEEEEeeecCCCCCccHHHHHHHHHHHH------------hcCCCC-----------CCCCCCCCCcccccccCCCCcc
Q 020294 121 GSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSS-----------KGFGFDVDNTIGSTPQINKWTS 177 (328)
Q Consensus 121 ~~~~v~e~l~G~~~~~~~~~lg~~La~lH------------~~~~~~-----------~~~g~~~~~~~g~~~~~~~~~~ 177 (328)
..++|||+++.+.++.++..+|++||.|| ....-. ..|||...+++|.+||.|+|.+
T Consensus 82 gs~lime~idf~~lr~~~a~lG~qlAdmHl~n~kl~e~r~~~~~tv~rgge~~e~~~v~~FGF~v~tccG~lpQvNdW~e 161 (313)
T KOG3021|consen 82 GSSLIMEHIDFQGLRSDAAKLGSQLADMHLKNEKLAEARRTEAGTVGRGGEEGEQIGVENFGFHVVTCCGRLPQVNDWQE 161 (313)
T ss_pred ceeeeeehhhcccchhHHHHHHHHHHHHhhhhHHHHHHHHHhccccccCcccccccchhccceeeeeecccCcccccchh
Confidence 99999999999999999999999999999 222111 1289999999999999999999
Q ss_pred cHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCC
Q 020294 178 NWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGH 257 (328)
Q Consensus 178 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~ 257 (328)
+|.+||...|+.++++.+.+...|.+..+++..+..+++.+|.+....|+|+|||||+|||--|+.++++|+|+.++|||
T Consensus 162 dW~eFf~rhRlq~Qldl~~~~~~Dre~~el~~~L~~kia~Lf~~~eI~PaLlHGDLW~GNva~D~~~ePiIfDPasfYgh 241 (313)
T KOG3021|consen 162 DWEEFFARHRLQPQLDLLEKTYGDREAFELWSILQTKIADLFKCLEILPALLHGDLWSGNVAEDGAGEPIIFDPASFYGH 241 (313)
T ss_pred hHHHHHHHHhhhHHHHHHHHhhccHHHHHHHHHHHHhhHHHhccceeehhhhccccccCcccccCCCCceEeCchhhcCC
Confidence 99999998899999999988888888888999888889999998778899999999999999888888999999999999
Q ss_pred chhhhhhhhh-cCCChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHhcC
Q 020294 258 NEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 328 (328)
Q Consensus 258 p~~DLa~~~~-~~~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~~~~~ 328 (328)
+++|+++.++ +||+++|+++|++..|..+++++|+.+|+||++|+||+.||++|+++...|++.|+.+++.
T Consensus 242 ~Efefgia~mfGgf~~sF~naY~k~ipka~G~eqR~~LYqLyhyLNHwNhFGs~YRs~sl~i~~n~lk~~~~ 313 (313)
T KOG3021|consen 242 SEFEFGIAKMFGGFTQSFYNAYHKKIPKAPGFEQRLLLYQLYHYLNHWNHFGSGYRSSSLDIMRNLLKNCYN 313 (313)
T ss_pred cHHHHHHHHHhCCCcHHHHHHHhhhcCCCCcHHHHHHHHHHHHHhhhhhhhccccccchhHHHHHHHHHhcC
Confidence 9999999864 8899999999999999999999999999999999999999999999999999999998763
No 4
>PRK10593 hypothetical protein; Provisional
Probab=100.00 E-value=9.3e-41 Score=304.89 Aligned_cols=277 Identities=18% Similarity=0.190 Sum_probs=219.2
Q ss_pred hHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccc
Q 020294 38 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGA 116 (328)
Q Consensus 38 ~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~ 116 (328)
+.|++-+.+. .+.++.+++++++|.++.+|++++.++++|+|+.+.. ....+..|++.|++|++.+++|||+|+..+.
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~ 80 (297)
T PRK10593 2 EQLRAELSHL-LGEKLSRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMT 80 (297)
T ss_pred hHHHHHHHHH-hchhhheeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEec
Confidence 3466666666 4558999999999999999999998889999998653 4568999999999999876799999998765
Q ss_pred cC--CCceEEEEeeecCCCCC----------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH
Q 020294 117 LP--TGGSYIIMEFIEFGSSR----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA 184 (328)
Q Consensus 117 ~~--~~~~~~v~e~l~G~~~~----------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~ 184 (328)
.. .+..++|||+|+|.+.. ....++++.|++||+... +|+ .|. ..+.|..+|..|+.
T Consensus 81 ~~~~~g~~~LVmE~i~G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~----~g~-----~g~--~~~~~~~~w~~f~~ 149 (297)
T PRK10593 81 HEQSPGPDVLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRIDS----RGC-----VGA--VDSTQENLWPSWYQ 149 (297)
T ss_pred cCCcCCCeEEEEeccCCEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh----hhc-----ccC--CCCcccccHHHHHH
Confidence 32 47799999999998641 123556799999999754 443 222 24557778888886
Q ss_pred HhhhHHHH---HHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CC-eEEEccc-cccCCc
Q 020294 185 EHRLGYQL---KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GE-PVILDPA-CYYGHN 258 (328)
Q Consensus 185 ~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~-~~iID~~-~~~G~p 258 (328)
.|+..+. +.+..........+.+.++.+.+++.+..++.+++|||||||++||+++++ +. ++||||. +.+||+
T Consensus 150 -~rl~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~r 228 (297)
T PRK10593 150 -QRVEVLWTTLNQFNNTGLTMQDRRILFRTRECLPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPR 228 (297)
T ss_pred -HHHHHHHhhhhhccccCCChhHHHHHHHHHHhchhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCH
Confidence 4665433 222222222233344555566677777655567899999999999999864 33 7999997 789999
Q ss_pred hhhhhhhhhcCCChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHhc
Q 020294 259 EAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK 327 (328)
Q Consensus 259 ~~DLa~~~~~~~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~~~~y~~~~~~~~~~~~~~~~ 327 (328)
++||+++.+++|.+.|+++|++..|++++|++|..+|.||++|+|.++||.=|......++++.|.||.
T Consensus 229 E~DLa~~~~~~f~~~f~~~Y~~~~pl~~g~~~R~~ly~Ly~~l~h~~~fG~~~~~~~~~~~~~~~~~~~ 297 (297)
T PRK10593 229 EYELFRLMDNGLAEQLLWRYLQKAPVAESFIWRRWLYVLWDEVAQLVNTGRFDRRRFDLAAKSLLPWLA 297 (297)
T ss_pred HHhHHHhhcCCccHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHhCccchhhHHHHHHHhccccC
Confidence 999998877899999999999999999999999999999999999999999999999999999998873
No 5
>PRK05231 homoserine kinase; Provisional
Probab=99.97 E-value=1.4e-30 Score=240.65 Aligned_cols=245 Identities=16% Similarity=0.194 Sum_probs=171.3
Q ss_pred hhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCc
Q 020294 29 TFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRA 108 (328)
Q Consensus 29 ~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~V 108 (328)
|||||.++.++++++|+.++.+ ++.+++++.+|..|.+|+|++++|+||||+.+......+..|.+++++|++. ++||
T Consensus 1 m~vyt~ls~~~l~~~l~~y~~~-~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~~~~~l~~~~~~l~~L~~~-glpv 78 (319)
T PRK05231 1 MAVYTDVSDDELAAFLAPYDLG-ELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERLTAEDLPFFLGLMQHLAAR-GVPV 78 (319)
T ss_pred CCccccCCHHHHHHHHHhcCCc-hhhccchhccccccceEEEEeCCCcEEEEEeccCChHHhHHHHHHHHHHHHC-CCCC
Confidence 8999999999999999877775 8999999999999999999999999999998633345566788999999986 7999
Q ss_pred ccceeccccC-----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccH
Q 020294 109 PRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNW 179 (328)
Q Consensus 109 P~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w 179 (328)
|+|+...... .+..+++++|++|.... ..++++|+.||+||.+..+ |..+..+.. .+ ..|
T Consensus 79 P~~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---f~~~~~~~~-------~~-~~~ 147 (319)
T PRK05231 79 PAPVARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRD---FPLERPNLR-------GL-AWW 147 (319)
T ss_pred CcceeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhc---CCccCCCCC-------Ch-HHH
Confidence 9999764321 46789999999998653 3578999999999998863 432211111 00 112
Q ss_pred HHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhh-hccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCC
Q 020294 180 IEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP-LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH 257 (328)
Q Consensus 180 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~ 257 (328)
.+.+. ++.+.+.... ...+.+.++++.+.+.. ... ..+.++||||++++||++++++..+|||| .++.|+
T Consensus 148 ~~~~~--~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~--~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~ 219 (319)
T PRK05231 148 RELAP--RLLPFLADEQ----AALLEAELAAQLAFLASAAWP--ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACNDK 219 (319)
T ss_pred HHHHH--HHhhccChhH----HHHHHHHHHHHHHhhhccccc--cCCcccCCCCCCCCcEEEECCceEEEEecccccCCc
Confidence 22221 1111110000 00111223333333221 111 25678999999999999987766799999 578999
Q ss_pred chhhhhhh---hhc----CCC----hhhHHHHhhhCCCCCCHHHHHHH
Q 020294 258 NEAEFGMS---WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDL 294 (328)
Q Consensus 258 p~~DLa~~---~~~----~~~----~~f~~~Y~~~~pl~~~~~~r~~l 294 (328)
+.+|||.+ ||. .+. .+|++||++.+|+++...+.+..
T Consensus 220 ~~~DlA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~E~~~l~~ 267 (319)
T PRK05231 220 LLYDVAITLNDWCFEADGSLDATKARALLAAYQSVRPLTAAERAALPV 267 (319)
T ss_pred hHHHHHHHHHHHHccCCCCcCHHHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 99999975 342 233 57999999999998654443333
No 6
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.97 E-value=3.3e-29 Score=230.40 Aligned_cols=246 Identities=15% Similarity=0.193 Sum_probs=176.4
Q ss_pred hhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCC
Q 020294 29 TFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIR 107 (328)
Q Consensus 29 ~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~ 107 (328)
|+|||.++.++|.+++.+++++ .+.+++++++|..|.+|++++++++||||+.... ..+.+..|.+++++|++. ++|
T Consensus 1 ~~~~~~~~~~~l~~~l~~y~~~-~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~-g~p 78 (307)
T TIGR00938 1 MAVYTSVSDEEMSSFLDGYDLG-ELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKRVKAEELPFFLALTTHLAAR-GLP 78 (307)
T ss_pred CCccccCCHHHHHHHHHhcCCC-CceeccccCCccccceEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHHHHHHC-CCC
Confidence 8999999999999999988775 7889999999999999999999999999998653 345677889999999886 799
Q ss_pred cccceeccccC-----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCccc
Q 020294 108 APRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN 178 (328)
Q Consensus 108 VP~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~ 178 (328)
||+++...... ++..+++++|++|.... ...+++|+.||+||..... |..+... ..+...
T Consensus 79 vp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---~~~~~~~--------~~~~~~ 147 (307)
T TIGR00938 79 VPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAH---FPENRKN--------SLRLEA 147 (307)
T ss_pred CCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc---CCCCCCC--------CCChHH
Confidence 99999865421 46789999999998653 3468999999999998853 3322110 012234
Q ss_pred HHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCC
Q 020294 179 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH 257 (328)
Q Consensus 179 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~ 257 (328)
|...+... . .... ....+..+.+++.++.+...... ..+.++||||+|++||++++++..+|||| .+++|+
T Consensus 148 w~~~~~~~-~-~~~~-----~l~~~~~~~l~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~ 219 (307)
T TIGR00938 148 WHILAEKC-F-EAAP-----QLEAHMGAELDKELDYLDKFWPR-DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDA 219 (307)
T ss_pred HHHHHHhh-h-hccc-----ccCHHHHHHHHHHHHHHHhhhhh-cCCCccCCCCCCcCcEEEECCceEEEeecccccCcc
Confidence 55443221 0 0000 01111122233333333322222 35689999999999999998876799999 478999
Q ss_pred chhhhhhh---hh----cCCC----hhhHHHHhhhCCCCCCHHHHHHHH
Q 020294 258 NEAEFGMS---WC----AGFG----GSFYNSYFEVMPKQPGFEKRRDLY 295 (328)
Q Consensus 258 p~~DLa~~---~~----~~~~----~~f~~~Y~~~~pl~~~~~~r~~ly 295 (328)
+++||+.+ ++ ..+. ..|+++|++.+|+++...+.+...
T Consensus 220 ~~~DLA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~e~~~l~~~ 268 (307)
T TIGR00938 220 RAYDLAITVNAWCFDADDHFDADHAKALIKGYHQSRPLTEEEKAAFPVL 268 (307)
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 99999975 23 2243 689999999999987655544444
No 7
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.96 E-value=2.5e-27 Score=216.70 Aligned_cols=236 Identities=15% Similarity=0.180 Sum_probs=167.6
Q ss_pred hHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc
Q 020294 38 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL 117 (328)
Q Consensus 38 ~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~ 117 (328)
+++++++.+++.+ ++.+++++.+|..|.+|++.+++++||||+.+......+..|++++++|++. ++|||+++.....
T Consensus 2 ~~l~~~l~~y~~~-~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~-g~~vp~~i~~~~g 79 (296)
T cd05153 2 EELASFLADYDLG-ELLSFEGISAGIENTNYFVTTDSGRYVLTLFEKVSAEELPFFLALLDHLAER-GLPVPRPIADRDG 79 (296)
T ss_pred HHHHHHHHHcCCC-chhheecccCccccceEEEEeCCCcEEEEEcCCCChHhccHHHHHHHHHHHC-CCCCCccccCCCC
Confidence 6899999988765 7889999999999999999999899999998754456678899999999986 6999999986432
Q ss_pred C-----CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhh
Q 020294 118 P-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRL 188 (328)
Q Consensus 118 ~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l 188 (328)
. ++..+.|++|++|..+. ....++|+.||+||..... +....+. .-...|...... +.
T Consensus 80 ~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~---~~~~~~~---------~~~~~~~~~~~~-~~ 146 (296)
T cd05153 80 EYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQS---FPGERNN---------LRGLAWIRELGK-DL 146 (296)
T ss_pred cEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc---CCccCCC---------cCCcHHHHHHHH-Hh
Confidence 1 46789999999998763 3578999999999999853 2211100 011233322111 01
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCCchhhhhhh--
Q 020294 189 GYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS-- 265 (328)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~p~~DLa~~-- 265 (328)
.. .........+++.++.+...... ..+.++||||+|++||++++++.++|||| .+++|++++||+.+
T Consensus 147 ~~--------~l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~~~~Dla~~~~ 217 (296)
T cd05153 147 LP--------LLSAEDRALLADELARQDAFDPS-DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACTDAFLYDLAITLN 217 (296)
T ss_pred cc--------ccCHHHHHHHHHHHHHHHhhhhh-cCCCcCCccCcCcccEEEeCCceEEEeehhhhcCchHHHHHHHHHH
Confidence 00 01222233444444444432222 35678999999999999998877799999 57899999999965
Q ss_pred -hhc----CCC----hhhHHHHhhhCCCCCCHHHHHHHHHH
Q 020294 266 -WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLYML 297 (328)
Q Consensus 266 -~~~----~~~----~~f~~~Y~~~~pl~~~~~~r~~ly~l 297 (328)
++. +++ +.|+++|++..|++++..+.+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~gY~~~~~ls~~e~~~l~~~~~ 258 (296)
T cd05153 218 DWCFDEDGALDPERAQALLAGYQAVRPLTEAERAALPIMLR 258 (296)
T ss_pred HHHhCccCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 221 133 57999999999998665555554443
No 8
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=99.95 E-value=2.4e-26 Score=210.78 Aligned_cols=242 Identities=18% Similarity=0.196 Sum_probs=172.7
Q ss_pred hhhhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCC
Q 020294 27 RRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRT 105 (328)
Q Consensus 27 ~~~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~ 105 (328)
..|++++.+..+++...|..+++| ...+...+.+ ..|.||++++++|+||||++++. ....+..|.+++++|++. +
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~g-~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~~~~~~i~~el~~l~~La~~-~ 79 (331)
T COG2334 3 DSMAVFTPLTSDEAAAALEAYHYG-LDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPGWTRAEIPFELALLQHLAER-G 79 (331)
T ss_pred cccccccCcChHHHHHHHHhcCcC-cccccccccc-ccCceEEEEecCCCeEEEEecCCCCHHHHHHHHHHHHHHHHc-C
Confidence 358999999999999999998777 4556777765 89999999999999999999874 667788999999999997 6
Q ss_pred CCcccceeccccC-----CC--ceEEEEeeecCCCCC-----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCC
Q 020294 106 IRAPRPFKVGALP-----TG--GSYIIMEFIEFGSSR-----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQIN 173 (328)
Q Consensus 106 v~VP~~~~~~~~~-----~~--~~~~v~e~l~G~~~~-----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~ 173 (328)
++||.|+...+.. .+ +++.|++|++|..+. .+++.+|+.||+||.+... |.+..++..+. .
T Consensus 80 i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~---f~~~~p~~~~~----~ 152 (331)
T COG2334 80 IPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRG---FPFERPNALRR----L 152 (331)
T ss_pred CCCCCCccCCCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCc---CCccCCCcccc----c
Confidence 8888885443221 46 899999999998764 3579999999999999974 54444433321 1
Q ss_pred CCcccHHHHHHHhhhHHHHHHHHhhCCChHH----HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC-CeEE
Q 020294 174 KWTSNWIEFYAEHRLGYQLKLALDQYGDSTI----YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVI 248 (328)
Q Consensus 174 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-~~~i 248 (328)
.|.- .. .+.... .....+..+ ...++++.+.++..++. ....+||||++++||++++++ .+++
T Consensus 153 ----~w~~-~~-~~~~~~----~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~--~~~~iIH~D~~~~NVl~d~~~~~~g~ 220 (331)
T COG2334 153 ----EWDI-LE-PRALLR----LDLVEPEDLRAALLAALDRLLARLPAHLPA--LGDQIIHGDLHPDNVLFDDDTDVSGF 220 (331)
T ss_pred ----chhh-hc-chhhhh----hcccCchhhHHHHHHHHHHHHhhchhhCCc--ccceeeecCCCccceeEcCCCCeeeE
Confidence 2221 00 000000 000011212 23344444444444442 224499999999999999887 4899
Q ss_pred Ecc-ccccCCchhhhhhhh---hcCC------ChhhHHHHhhhCCCCCCHHH
Q 020294 249 LDP-ACYYGHNEAEFGMSW---CAGF------GGSFYNSYFEVMPKQPGFEK 290 (328)
Q Consensus 249 ID~-~~~~G~p~~DLa~~~---~~~~------~~~f~~~Y~~~~pl~~~~~~ 290 (328)
||| +|++|+..+||+++. .... -.+|++||++++|+++...+
T Consensus 221 iDFdDa~~~~~i~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~v~pl~~~El~ 272 (331)
T COG2334 221 IDFDDAGYGWFIYDLAIALNAWNGDEADPRAAIAAFLEGYEEVRPLTAAELE 272 (331)
T ss_pred EEccccccchHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhcCCCCHHHHH
Confidence 998 689999999999864 2221 15799999999999864433
No 9
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=99.93 E-value=8.8e-24 Score=189.38 Aligned_cols=231 Identities=16% Similarity=0.124 Sum_probs=150.4
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
+.++.+|.+|.+|++++++++||+|+++.... ...+.|.++++.+++. ++ +|+++..+. .++||+|++|.
T Consensus 1 ~~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~-g~-~P~~i~~~~-----~~~v~e~i~G~ 73 (256)
T TIGR02721 1 VQTLSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSAL-GL-APKPILVNE-----HWLLVEWLEGE 73 (256)
T ss_pred CCcCCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhc-CC-CCceEEEeC-----CEEEEEeccCc
Confidence 35678999999999998878999999865322 2357899999999986 44 899998763 47999999998
Q ss_pred CCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294 133 SSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205 (328)
Q Consensus 133 ~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 205 (328)
++. .....+++.|+++|+.+.. +.+. +.. .++..++.........++
T Consensus 74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~----~~~~---------------~~~-----~~~~~~~~~l~~~~~~~~-- 127 (256)
T TIGR02721 74 VITLDQFVALDLLLELAALLHQLHSQPRF----GYPL---------------SLK-----ARIAHYWLQIDPARRTPE-- 127 (256)
T ss_pred ccccccccCchhHHHHHHHHHHHhCCCCC----CCCC---------------CHH-----HHHHHHHHhcccccCChH--
Confidence 753 2468999999999998752 1110 000 011111111111111222
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhhc-C--CChhhHHHHhhh
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWCA-G--FGGSFYNSYFEV 281 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~~-~--~~~~f~~~Y~~~ 281 (328)
+.++.+.+.......+.++++||||++++||++++++ .+||||+ +.+|||.+|||.++.. + ..+.|+++|.+.
T Consensus 128 --~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~~DLa~~~~~~~~~~~~~~l~~Y~~~ 204 (256)
T TIGR02721 128 --WLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIALELAAIIRANDEEQQQDFVQRYCQR 204 (256)
T ss_pred --HHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCC-CEEEeccccCcCCHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 2233333222111113578999999999999998876 7899995 7899999999987532 1 225799999988
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHhc--------cCcHHHHHHHHHHH
Q 020294 282 MPKQ--PGFEKRRDLYMLYHYLNHYNLFG--------SGYRSSALSIIDDY 322 (328)
Q Consensus 282 ~pl~--~~~~~r~~ly~l~~~l~~~~~~~--------~~y~~~~~~~~~~~ 322 (328)
.+.. +.+.+++..|..+..+....+++ ..|...+..+.+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~a~~~~~~~ 255 (256)
T TIGR02721 205 RRIYSISVLWRQVKAWQPWVDYMAALWFELRWQQTGDPQFLELAQELRHRL 255 (256)
T ss_pred hCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhh
Confidence 6543 35556666655444444444443 35555555555443
No 10
>PRK11768 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=1.7e-23 Score=193.67 Aligned_cols=248 Identities=16% Similarity=0.142 Sum_probs=163.5
Q ss_pred hhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCc
Q 020294 32 MAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRA 108 (328)
Q Consensus 32 ~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~V 108 (328)
|..++.+.|.+.+...|+. ....+..++ |..|.||+|+++++ +||+|++++. ....+..|++++.+|++. ++||
T Consensus 8 ~~~l~p~~~~~a~~~~g~~-~~~~~~~l~-s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~-gipv 84 (325)
T PRK11768 8 FQTLTPDLILDALESLGLR-VDGRLLALN-SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEA-EIPV 84 (325)
T ss_pred CCCCChHHHHHHHHHcCCC-CccceEeec-cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC-CCCC
Confidence 5568999999999888653 223456664 68899999999766 7999998743 356678999999999986 6898
Q ss_pred ccceeccc-cC---CCceEEEEeeecCCCCC----ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHH
Q 020294 109 PRPFKVGA-LP---TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWI 180 (328)
Q Consensus 109 P~~~~~~~-~~---~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~ 180 (328)
|.|+..+. .. ++..+.+++|++|+... ...+++|+.||+||..+.. +++... ..| ++.
T Consensus 85 ~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~~~~~~~~~lG~~LarlH~~~~~---~~~~~r---------~~~--~~~ 150 (325)
T PRK11768 85 VAPLAFNGQTLHEHQGFRFALFPRRGGRAPELDNLDQLEWVGRFLGRIHQVGAK---RPFEHR---------PTL--DLQ 150 (325)
T ss_pred CCCccCCCCEEEEECCEEEEEEeeeCCCCCCCCCHHHHHHHHHHHHHHHhhccC---CCCCCC---------CcC--CHH
Confidence 88753322 10 46789999999998753 4578999999999998873 222110 011 111
Q ss_pred HHHHHhhhHHHHHHHHhhCCChH----HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-cccc
Q 020294 181 EFYAEHRLGYQLKLALDQYGDST----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYY 255 (328)
Q Consensus 181 ~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~ 255 (328)
.+... ....+. .....+.+ ..+.++++.+.+...+...+.+.++||||+|++||+++ + .++|||| +++.
T Consensus 151 ~~~~~--~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 151 EYGIE--PRDWLL--ASDLIPSDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred HHHHH--HHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 11100 000110 01111221 22334444443333333213577899999999999995 4 4789999 5789
Q ss_pred CCchhhhhhhhhcCC------ChhhHHHHhhhCCCCCCHHHHHHHHHHHHHHH
Q 020294 256 GHNEAEFGMSWCAGF------GGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLN 302 (328)
Q Consensus 256 G~p~~DLa~~~~~~~------~~~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~ 302 (328)
|++++||+++..... -..|++||++.+|+++.....+..+.....+.
T Consensus 225 g~~i~DLa~~l~~~~~~~~~~~~~~l~GY~~~r~l~~~e~~~l~~l~~lR~~~ 277 (325)
T PRK11768 225 GPAVQDLWMLLSGDRAEQLMQLETLLEGYEEFCEFDPRELALIEPLRALRLIH 277 (325)
T ss_pred CCHHHHHHHHhccCcchhHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 999999998643211 24799999999999876666666655444433
No 11
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.90 E-value=1.7e-22 Score=179.61 Aligned_cols=218 Identities=14% Similarity=0.112 Sum_probs=142.2
Q ss_pred eeeeCCccc-ceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 56 ICPVGGGCI-NLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 56 v~~i~~G~~-n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
.++|..|++ |.+|+++.+++++|+|+.++.....+.+|++++++|++. ++||+++..+.. .+..++||++++|.++
T Consensus 3 ~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~-~~~~~lv~e~i~G~~l 79 (244)
T cd05150 3 WERVTEGQSGATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLAGK--LPVPEVIDYGSD-DGRAWLLTSAVPGVPA 79 (244)
T ss_pred ceecCCCCCcCeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHHhc--CCCCeEEEEEec-CCccEEEEEeeCCccH
Confidence 467777764 899999987789999999764445678999999999985 899999988764 3678999999999875
Q ss_pred C---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHH-Hh-hCCChH
Q 020294 135 R---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA-LD-QYGDST 203 (328)
Q Consensus 135 ~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~-~~-~~~~~~ 203 (328)
. ....++|+.+++||+.+... +.+. + +..++.+. .....+.. .. ...+..
T Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~--~~~~-----~-------~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 140 (244)
T cd05150 80 AALWEELEPERLVDALAEALRRLHALPVAD--CPFD-----R-------RLDRRLAE-----ARARVENGLVDEDDFDDE 140 (244)
T ss_pred hHhhcccCHHHHHHHHHHHHHHHhcCCccc--CCcc-----h-------hHHHHHHH-----HHHHHhcCCcChhhCcHh
Confidence 3 23688999999999986521 1110 0 00000000 00000000 00 000100
Q ss_pred H-HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh-h----c---CCChh
Q 020294 204 I-YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW-C----A---GFGGS 273 (328)
Q Consensus 204 ~-~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~-~----~---~~~~~ 273 (328)
. ....+++.+.+...... ..+++|||||++++|||+++++..+||||+ +.+|||.+||+.+. . . +..+.
T Consensus 141 ~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~~Dla~~~~~~~~~~~~~~~~~~ 219 (244)
T cd05150 141 RRGWSAEELYAELEATRPA-EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRYQDLALAVRSLRENLGGEEYAAR 219 (244)
T ss_pred hcCCCHHHHHHHHHhhCCC-cCceEEECCCCCCccEEEeCCcEEEEEEccccccccHHHHHHHHHHHhhhhcCChHHHHH
Confidence 0 00122233333322222 357899999999999999987778999995 67999999999753 1 1 12357
Q ss_pred hHHHHhhhCCCCCCHHHHHHHHHHHHH
Q 020294 274 FYNSYFEVMPKQPGFEKRRDLYMLYHY 300 (328)
Q Consensus 274 f~~~Y~~~~pl~~~~~~r~~ly~l~~~ 300 (328)
|+++|.... . + .+|+.+|+++..
T Consensus 220 f~~~Y~~~~-~--~-~~~~~~~~~~~~ 242 (244)
T cd05150 220 FLDRYGIDA-P--D-PEKLAYYRLLDE 242 (244)
T ss_pred HHHHcCCCC-C--C-HHHHHHHHHHhh
Confidence 899997641 1 2 578888887643
No 12
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.90 E-value=1.1e-22 Score=178.66 Aligned_cols=190 Identities=15% Similarity=0.204 Sum_probs=128.2
Q ss_pred eeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 54 TKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
.+.+++++|.+|.+|+. .++++|+|+++.. ....++.|+++++.++.. ++|||+|+..+.. .+...+||+|++|.
T Consensus 4 ~~~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~-~~~~glv~e~i~G~ 79 (226)
T TIGR02172 4 SDWTQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSL-GIPTPHPFDLVED-GGRLGLIYELIVGK 79 (226)
T ss_pred hHheeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHc-CCCCCceEEEEec-CCeeeeeeeecCCc
Confidence 45678999999999984 3568999999763 345578999999999975 7999999999754 34567899999997
Q ss_pred CC-----C-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCC
Q 020294 133 SS-----R-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG 200 (328)
Q Consensus 133 ~~-----~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~ 200 (328)
+. . .....+|+.+++||+.+.+. .++ + ... .++...++... ..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~--~~l---------~-------~~~-----~~~~~~l~~~~--~~ 134 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT--STF---------Q-------SYK-----EKIRKFIEEKD--FV 134 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC--CcH---------H-------HHH-----HHHHHHHHhcc--CC
Confidence 41 1 13577888888899876531 111 0 000 11211111110 11
Q ss_pred ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh-cCC----Chhh
Q 020294 201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGF----GGSF 274 (328)
Q Consensus 201 ~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~-~~~----~~~f 274 (328)
+....+.+.+.++. + +.++++||||||++||++++++ ++||||+ +++|||.+||+.++. ..+ ...|
T Consensus 135 ~~~~~~~l~~~l~~----~---~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~~~~~~~~~~ 206 (226)
T TIGR02172 135 PKDYKEKARAFIKE----V---PDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNPLFDLGLLFMFCHYLDDDKLQA 206 (226)
T ss_pred CHHHHHHHHHHHHh----C---CCCCceEecCCCCCcEEEcCCC-cEEEechhcCcCCHHHHHHHHHHhccCChhHHHHH
Confidence 21222333322221 2 3456889999999999998877 8999995 789999999998753 233 3456
Q ss_pred HHHHhh
Q 020294 275 YNSYFE 280 (328)
Q Consensus 275 ~~~Y~~ 280 (328)
+..|+.
T Consensus 207 ~~~y~~ 212 (226)
T TIGR02172 207 IFHMNA 212 (226)
T ss_pred HHhcCH
Confidence 777764
No 13
>PLN02876 acyl-CoA dehydrogenase
Probab=99.90 E-value=3.1e-22 Score=206.00 Aligned_cols=255 Identities=16% Similarity=0.199 Sum_probs=162.3
Q ss_pred cCChhHHHHHHHhcCCCc--c--eeeeeeeCCcccceeEEEEeCC----ccEEEEecCCC----CcchHHHHHHHHHHHH
Q 020294 34 ALSDDPIREWILSEGKAT--H--ITKICPVGGGCINLASRYGTDA----GSFFVKTNRSI----GPSMFEGEALGLGAMY 101 (328)
Q Consensus 34 ~~~~~~i~~~l~~~~~~~--~--i~~v~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~----~~~~~~~E~~~l~~L~ 101 (328)
.++.+.+.+||.+...+. . ..+++++++|.+|.+|+++..+ .+||||..+.. ....+.+|+++++.|.
T Consensus 17 ~~d~~~l~~~l~~~~~~~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~ 96 (822)
T PLN02876 17 RFDEDALLRYAAANVAGFPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALG 96 (822)
T ss_pred cCCHHHHHHHHHHhCCCcCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHh
Confidence 478899999998763322 2 3579999999999999998765 37999998652 2356889999999998
Q ss_pred hcCCCCcccceeccccC--CCceEEEEeeecCCCCC-------------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q 020294 102 ETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTI 166 (328)
Q Consensus 102 ~~~~v~VP~~~~~~~~~--~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~ 166 (328)
+..++|||+++..+.+. .|.+|+||||++|.... ....++++.|++||+..... .|+...
T Consensus 97 ~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~--~gl~~~--- 171 (822)
T PLN02876 97 EHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDA--IGLGKY--- 171 (822)
T ss_pred hcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchh--cChhhc---
Confidence 65679999999886542 37899999999997531 13467999999999987632 232110
Q ss_pred cccccCCCCcccHHHHHHHhhhHHHHHHHHhhCC--ChHHHHHHHHHHHHhhhhccCCC---CCCceeccCCCCCCeeec
Q 020294 167 GSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG--DSTIYQRGHRLMKNLAPLFEGVN---VEPCLLHGDLWSGNISSD 241 (328)
Q Consensus 167 g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~---~~~~LiHgDl~~~Nil~~ 241 (328)
|. | .+|.. ..+..+.+....... .......++++.+.+....+... .+++||||||+++|||++
T Consensus 172 g~-~------~~~~~----~~l~~w~~~~~~~~~~~~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~ 240 (822)
T PLN02876 172 GR-R------DNYCK----RQVERWAKQYLASTGEGKPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFH 240 (822)
T ss_pred CC-C------CchHH----HHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEc
Confidence 10 0 11110 111111111111000 00001223333444433233211 157899999999999998
Q ss_pred CC--CCeEEEccc-cccCCchhhhhhh---hh-c-------------------CCC--hhhHHHHhhhCCCCCCHHHHHH
Q 020294 242 KN--GEPVILDPA-CYYGHNEAEFGMS---WC-A-------------------GFG--GSFYNSYFEVMPKQPGFEKRRD 293 (328)
Q Consensus 242 ~~--~~~~iID~~-~~~G~p~~DLa~~---~~-~-------------------~~~--~~f~~~Y~~~~pl~~~~~~r~~ 293 (328)
++ +..+||||+ +.+|||..||+++ ++ . |++ +++++.|++..+.+.. ...+.
T Consensus 241 ~~~~~v~aVLDWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~e~~~~Y~~~~g~~~~-~~~~~ 319 (822)
T PLN02876 241 PTEDRVIGILDWELSTLGNQMCDVAYSCLPYIVDINLDNQQVGKGFEFTGIPEGIPSLPEYLAEYCSASGKPWP-AANWK 319 (822)
T ss_pred CCCCeEEEEEeeeccccCChHHHHHHHhhhccccccCCccccccccccCcCCCCCCCHHHHHHHHHHHhCCCCC-CcccH
Confidence 63 346899995 7899999999965 21 1 121 4699999998664311 12356
Q ss_pred HHHHHHHHHHHH
Q 020294 294 LYMLYHYLNHYN 305 (328)
Q Consensus 294 ly~l~~~l~~~~ 305 (328)
+|+.+..+....
T Consensus 320 ~~~~~~~~r~a~ 331 (822)
T PLN02876 320 FYVAFSLFRGAS 331 (822)
T ss_pred HHHHHHHHHHHH
Confidence 666665554444
No 14
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.90 E-value=3.5e-22 Score=176.81 Aligned_cols=215 Identities=17% Similarity=0.131 Sum_probs=135.8
Q ss_pred eeeeC-CcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCC--CceEEEEeeecC
Q 020294 56 ICPVG-GGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIMEFIEF 131 (328)
Q Consensus 56 v~~i~-~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~--~~~~~v~e~l~G 131 (328)
|+++. ||..|.+|++. +.||+|+++.. ....++.|.+++++|++..+++||+++..+...+ +..+++|+|++|
T Consensus 2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G 78 (235)
T cd05155 2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG 78 (235)
T ss_pred ceeccCCCcccceEEcC---CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence 46664 77889999983 47999998753 3456889999999999766799999998776432 356999999999
Q ss_pred CCCC--------ccHHHHHHHHHHHHhcCCCCC-CCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCCh
Q 020294 132 GSSR--------GNQSVFGKKLAEMHKAGKSSK-GFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 202 (328)
Q Consensus 132 ~~~~--------~~~~~lg~~La~lH~~~~~~~-~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~ 202 (328)
.++. ...+++|+.|++||+.+.+.. ..+.. ... .......|...... .+ .... ...+.
T Consensus 79 ~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~-~~----~~~~-~~l~~ 145 (235)
T cd05155 79 ETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRH--NFL-----RGGDLAVRDAETRE-AI----EALE-GVIDV 145 (235)
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCc--ccc-----CCCChhHhhHHHHH-HH----HHcc-cccCh
Confidence 8763 235789999999999886421 11100 000 00001122211100 00 0000 00111
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh--c-CCChhhHHHH
Q 020294 203 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC--A-GFGGSFYNSY 278 (328)
Q Consensus 203 ~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~--~-~~~~~f~~~Y 278 (328)
..+.++.+...+... ..+++|||||||++|||+++++.++||||+ +.+|||++||+.+++ . +..+.|++.|
T Consensus 146 ---~~~~~~~~~~~~~~~--~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~~Dla~~~~~~~~~~~~~~~~~y 220 (235)
T cd05155 146 ---DAARALWEAALRAPW--WGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPACDLAIAWTLLDEDSRAAFRAAL 220 (235)
T ss_pred ---HHHHHHHHHHhcccc--cCCceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChHHHHHHHHhcCCHHHHHHHHHHc
Confidence 112222222222222 257899999999999999877767999995 789999999998753 1 1235789999
Q ss_pred hhhCCCCCCHHHHHHHH
Q 020294 279 FEVMPKQPGFEKRRDLY 295 (328)
Q Consensus 279 ~~~~pl~~~~~~r~~ly 295 (328)
+ +.+. -..|..+|
T Consensus 221 ~-~~~~---~~~~~~~~ 233 (235)
T cd05155 221 G-VDDA---TWARGRGW 233 (235)
T ss_pred C-CCHH---HHHHhccc
Confidence 8 4332 24555554
No 15
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.89 E-value=1.5e-22 Score=177.63 Aligned_cols=220 Identities=25% Similarity=0.369 Sum_probs=132.4
Q ss_pred eeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEEEeeecC
Q 020294 55 KICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEF 131 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e~l~G 131 (328)
+|+++++|..|.+|++++++++||+|.++.. ....+..|++++++|++. ++|||+++..+... .+..+++|+|++|
T Consensus 1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~-~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEH-GIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp -EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHT-TSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CCccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhc-CCCCceEEeecccccccccceEEEEEecc
Confidence 4789999999999999999999999999764 346688999999999987 57999999854322 3567999999999
Q ss_pred CCCC---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH--hhhHHHHHHHHhhCC
Q 020294 132 GSSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKLALDQYG 200 (328)
Q Consensus 132 ~~~~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~--~~l~~~~~~~~~~~~ 200 (328)
..+. ....++|+.|++||+...+. .+. ..+..+... ..+............
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~--~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPF--SPF----------------ADWPEWRLEFLRQLESWTARLRASEL 141 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTC--CCH----------------THHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccccccccccccccchhhhhhcccccccc--ccc----------------ccccccccccccccccccccccchhh
Confidence 8642 24589999999999996321 110 011111100 001111000000001
Q ss_pred ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeec-CCCCeEEEccc-cccCCchhhhhhhh-h--cCCChhhH
Q 020294 201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD-KNGEPVILDPA-CYYGHNEAEFGMSW-C--AGFGGSFY 275 (328)
Q Consensus 201 ~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~-~~~~~~iID~~-~~~G~p~~DLa~~~-~--~~~~~~f~ 275 (328)
........+++.+.+.+.+.. ..+.++||||++++|||++ +++..+||||+ +++|+|.+|++.+. . ......+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~~~~~~~~~~~~~ 220 (239)
T PF01636_consen 142 FDDLEELEERLLQELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLLRHFGEDQDPEFR 220 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHHHHHTTHCHHHHH
T ss_pred hhhhHHHHHHHHHHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHHHHhcccCCHHHH
Confidence 111112222245555444432 3688999999999999999 33434899995 68999999999764 2 12334455
Q ss_pred HHHhhhCCCCCCHHHHHHHH
Q 020294 276 NSYFEVMPKQPGFEKRRDLY 295 (328)
Q Consensus 276 ~~Y~~~~pl~~~~~~r~~ly 295 (328)
++|.+......++ +++..|
T Consensus 221 ~~~~~~~~~~~~~-~~~~~~ 239 (239)
T PF01636_consen 221 RAYLEAYGRAAGY-ARLRPY 239 (239)
T ss_dssp HHHHHHHTSSCHH-HHHHHH
T ss_pred HHHHHHhcCCCCH-HHhCCC
Confidence 5554443322333 444443
No 16
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=99.89 E-value=3.1e-21 Score=181.08 Aligned_cols=224 Identities=18% Similarity=0.237 Sum_probs=144.1
Q ss_pred hhhhhcCChhHHHHHHHhc-CC--CcceeeeeeeCCcccceeEEEEeCCc--cEEEEecCCC----------CcchHHHH
Q 020294 29 TFAMAALSDDPIREWILSE-GK--ATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGE 93 (328)
Q Consensus 29 ~~~~~~~~~~~i~~~l~~~-~~--~~~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E 93 (328)
|+.|..|+.+.+.+|+... +. .....++++++||..|.+|+|+..+| ++|||++++. ..++...|
T Consensus 1 ~~~y~~l~~~~v~~yl~~~~~~~~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~E 80 (401)
T PRK09550 1 MSGYETLTEEDAVEYAALKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIE 80 (401)
T ss_pred CCCCeeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHH
Confidence 4557789999999999444 42 23456789999999999999999876 8999997631 23456789
Q ss_pred HHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC-----------CccHHHHHHHHHHHHhcCCCCCCCCCCC
Q 020294 94 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDV 162 (328)
Q Consensus 94 ~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g~~~ 162 (328)
++.|+.+++..+..||+|+.++. +..++||||+++... +..++++|+.||++|..... +....
T Consensus 81 ae~L~~l~~~~p~~VPkV~~~D~---~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd---~~~~~ 154 (401)
T PRK09550 81 AEALKIQAKYVPDLVPKVYHYDE---ELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSD---FGLSS 154 (401)
T ss_pred HHHHHHHHhhCCCCCCeEEEECC---CCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccch---hhcCh
Confidence 99999998877788999999985 578999999998541 13579999999999965532 11110
Q ss_pred CCccccc-ccCCCCccc------HHH-HHHH--hhhHHHHHHHHhh-CCChHHHHHHHHHHHHhhhhccCCCCCCceecc
Q 020294 163 DNTIGST-PQINKWTSN------WIE-FYAE--HRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHG 231 (328)
Q Consensus 163 ~~~~g~~-~~~~~~~~~------w~~-~~~~--~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHg 231 (328)
....... ...|..... +.+ ++.. +++.+.+...... ..+.++...+.+ +...+. ..+.+||||
T Consensus 155 ~~~~~~~~~f~N~~l~~ite~lvft~P~~~~~~n~~~p~l~~~~~~l~~d~~L~~~~~~----L~~~~~--~~~~~l~Hg 228 (401)
T PRK09550 155 EEKKALVAKFTNPELCKITEDLVFTDPYFDHETNNFEPELEPEVEELRADKELKLEVAK----LKHKFL--TKAEALLHG 228 (401)
T ss_pred hhhhhHHhhcCCHHHhhhhHhhccccchhhhhhccCChhhHHHHHHHHhCHHHHHHHHH----HHHHHh--cCCCceeec
Confidence 0000000 000100000 000 1110 1222333222111 113333333333 333333 246789999
Q ss_pred CCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh
Q 020294 232 DLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS 265 (328)
Q Consensus 232 Dl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~ 265 (328)
|||++||++.+++ +.||||+ +.+|+|.+||+.+
T Consensus 229 Dl~~gni~~~~~~-~~viD~E~a~~G~~~~Dlg~~ 262 (401)
T PRK09550 229 DLHTGSIFVTEEE-TKVIDPEFAFYGPIGFDIGTF 262 (401)
T ss_pred cCCcccEEeeCCC-cEEEeccccccCChHHHHHHH
Confidence 9999999997764 8999996 7899999999965
No 17
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=99.89 E-value=1.6e-21 Score=177.08 Aligned_cols=233 Identities=19% Similarity=0.238 Sum_probs=151.5
Q ss_pred cCChhHHHHHHHhcCCC-cceeeeeeeCCcccceeEEEEeCCccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCc
Q 020294 34 ALSDDPIREWILSEGKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRA 108 (328)
Q Consensus 34 ~~~~~~i~~~l~~~~~~-~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~V 108 (328)
.++.+.+..++..+.++ .....++.+.+|++|.+|++..++.+||||.++.. ......+|+++++.+... .+||
T Consensus 7 ~~~~~~l~~~l~~~ip~~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~-~vP~ 85 (321)
T COG3173 7 ALDIAALAAYLRSQIPGYAGLLIVEEISGGWSNDTFRLGDTGQKYVLRKPPRGDPVESAHDEKREYRVIAALLDV-DVPV 85 (321)
T ss_pred cCCHHHHHHHHHhhCcCcCCCceeeeccCCcccceEEEecCCceEEEecCCccccchhhhHHHhHHHHHHHhcCC-CCCC
Confidence 35778899999888433 35566777789999999999988779999944321 234456788888888775 6888
Q ss_pred ccceeccccCC-CceEEEEeeecCCCCC----------ccHH-HHHHHHHHHHhcCCCC-CCCCCCCCCcccccccCCCC
Q 020294 109 PRPFKVGALPT-GGSYIIMEFIEFGSSR----------GNQS-VFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKW 175 (328)
Q Consensus 109 P~~~~~~~~~~-~~~~~v~e~l~G~~~~----------~~~~-~lg~~La~lH~~~~~~-~~~g~~~~~~~g~~~~~~~~ 175 (328)
|+++....... |.+|.||+|++|+... .... ++++.|+.||+++... ..+|.+. .+.+ ..
T Consensus 86 p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~-~~~~------rq 158 (321)
T COG3173 86 PRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPN-AYRG------RQ 158 (321)
T ss_pred cccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccC-cccc------ch
Confidence 88888765544 7899999999996421 2334 8999999999999521 1122111 1111 11
Q ss_pred cccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cc
Q 020294 176 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY 254 (328)
Q Consensus 176 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~ 254 (328)
...|..-+. ... .+...+.. .++++...+...-...+.+++++||||+++|+|+++++.++||||+ +.
T Consensus 159 l~~~~~~~~-----~~~---~~~~~~~p---~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~ 227 (321)
T COG3173 159 LARWDDEYR-----RAK---KELGGRIP---LADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELAT 227 (321)
T ss_pred hhHHHHHHH-----HHH---HhccCCCc---hHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence 122322221 000 11111111 2222222222221111468899999999999999998888999996 67
Q ss_pred cCCchhhhhhh-hh--c------CCC------hhhHHHHhhhCCCC
Q 020294 255 YGHNEAEFGMS-WC--A------GFG------GSFYNSYFEVMPKQ 285 (328)
Q Consensus 255 ~G~p~~DLa~~-~~--~------~~~------~~f~~~Y~~~~pl~ 285 (328)
+|||..||+.+ |. . .+. ..+++.|.+...+.
T Consensus 228 lGDP~~Dl~~~~W~~~~~~~~~~~~~~~~~~~~~l~a~y~~~~G~~ 273 (321)
T COG3173 228 LGDPLEDLAIICWTIFDEPAARAIFRLGVPALDELLATYARARGLA 273 (321)
T ss_pred cCCcHHHHHHHHhccccchhhhhhcccCcccHHHHHHHHHHhcCcc
Confidence 99999999987 63 1 122 35788888887765
No 18
>PLN02756 S-methyl-5-thioribose kinase
Probab=99.88 E-value=3e-21 Score=180.32 Aligned_cols=214 Identities=19% Similarity=0.180 Sum_probs=141.1
Q ss_pred hhhcCChhHHHHHHHhc------CCC-cceeeeeeeCCcccceeEEEEeCCccEEEEecCCC----------CcchHHHH
Q 020294 31 AMAALSDDPIREWILSE------GKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----------GPSMFEGE 93 (328)
Q Consensus 31 ~~~~~~~~~i~~~l~~~------~~~-~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~----------~~~~~~~E 93 (328)
.|..++.+.+.+|+.+. ..+ ..+..++++++|..|.+|+|+++++++|||.+++. ...+-..|
T Consensus 5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~E 84 (418)
T PLN02756 5 EFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFE 84 (418)
T ss_pred ccccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHH
Confidence 46678999999999886 221 25678999999999999999988789999999731 23444567
Q ss_pred HHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC--CC----------ccHHHHHHHHHHHHhcCCCCCCCCCC
Q 020294 94 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS--SR----------GNQSVFGKKLAEMHKAGKSSKGFGFD 161 (328)
Q Consensus 94 ~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~--~~----------~~~~~lg~~La~lH~~~~~~~~~g~~ 161 (328)
.+.|+.+.+..+++||+||.++. +..+++|||+++.+ ++ ...+.+|..+++..-.... ++..
T Consensus 85 a~aL~~~~~~~p~~VPkVy~~de---d~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd---~~~~ 158 (418)
T PLN02756 85 ATALREHGRLCPDHVPEVYHFDR---TMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSL---LYHD 158 (418)
T ss_pred HHHHHHhhhcCCCCCCeEEEECC---CCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcch---hccC
Confidence 88888887776789999999995 57899999999843 21 3468899999987333221 1111
Q ss_pred CCC-------cc-------------cccccCCCCcccHHHHHHHhhhHHHHHHHHhh-CCChHHHHHHHHHHHHhhhhcc
Q 020294 162 VDN-------TI-------------GSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFE 220 (328)
Q Consensus 162 ~~~-------~~-------------g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~ 220 (328)
... +. -.-|..+..... ...+.+....+. ..+++++..+.++ +..+-
T Consensus 159 ~~~kk~~~~~f~~N~elc~itEdlvFt~Py~~~~~n~--------~~~p~l~~~~~~l~~d~~L~~~v~~L----k~~f~ 226 (418)
T PLN02756 159 TTEHKRAVAEFCGNVELCRLTEQVVFSDPYKVSQYNR--------WTSPYLDRDAEAVREDNILKLEIAEL----KSMFC 226 (418)
T ss_pred hhhhhHHHHHhcCCHHHHHHHHhheeccccccchhcC--------CCCcchHHHHHHHhcCHHHHHHHHHH----HHHHH
Confidence 000 00 000110000001 111222222111 1244444444443 33333
Q ss_pred CCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh
Q 020294 221 GVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS 265 (328)
Q Consensus 221 ~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~ 265 (328)
...++|+|||||+|||++.+++ +.+||++ +++||+++||+++
T Consensus 227 --~~~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~~g~~~~d~g~~ 269 (418)
T PLN02756 227 --ERAQALVHGDLHTGSVMVTPDS-TQVIDPEFAFYGPMGFDIGAF 269 (418)
T ss_pred --hcccceeecCCCCCcEEEcCCC-ceEecchhhccCchHHhHHHH
Confidence 2578999999999999998776 8999986 7899999999985
No 19
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.88 E-value=1.7e-20 Score=172.68 Aligned_cols=223 Identities=16% Similarity=0.145 Sum_probs=141.3
Q ss_pred cceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCceEEEEeeecCCCCC---
Q 020294 64 INLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR--- 135 (328)
Q Consensus 64 ~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~~~v~e~l~G~~~~--- 135 (328)
.+.+|+|++++|.||||..+.. ...+..|.+++++|++. +++||+++...... ++..+.|++|++|....
T Consensus 9 ~~~v~~v~t~~g~~~LK~~~~~-~~~~~~~~~~~~~L~~~-g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~~~~~~ 86 (313)
T TIGR02906 9 LRNVYKVETDSGNKCLKKINYP-PERLLFILGAQEHLRKN-GFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRECDFNN 86 (313)
T ss_pred CccEEEEEeCCCCeEEEEcCCC-HHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEEEECCEEEEEehhccCcCCCCCC
Confidence 3459999999999999997532 34466789999999987 67999999875431 46789999999998753
Q ss_pred -ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHh--hhHHHHHHHHhhC-CC---hHHHHHH
Q 020294 136 -GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH--RLGYQLKLALDQY-GD---STIYQRG 208 (328)
Q Consensus 136 -~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~--~l~~~~~~~~~~~-~~---~~~~~~~ 208 (328)
....++|+.||+||..... |..+.. ..+. . ....|.+.+... .+....+.+.... .+ ..+.+.+
T Consensus 87 ~~~~~~~g~~La~lH~~~~~---~~~~~~----~~~~-~-~~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
T TIGR02906 87 PIDLKKAAKGLALFHHASKG---YVPPDG----SKIR-S-KLGKWPKQFEKRLKELERFKKIALEKKYKDEFDKLYLKEV 157 (313)
T ss_pred HHHHHHHHHHHHHHHHhCCC---CCCCCc----chhh-c-cccchHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 3579999999999999863 211110 0011 0 112354433321 2222222211111 11 0011111
Q ss_pred HH-------HHHHhh-----hhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh---hh---cC
Q 020294 209 HR-------LMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS---WC---AG 269 (328)
Q Consensus 209 ~~-------~~~~l~-----~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~---~~---~~ 269 (328)
+. .++.+. .+......+.++||||++++||++++ +.++||||+ +++|++++||+.+ ++ ..
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~~~~ 236 (313)
T TIGR02906 158 DYFLERGKKALELLNKSKYYDLCKEAKKIRGFCHQDYAYHNILLKD-NEVYVIDFDYCTIDLPVRDLRKLIIKLMKKNGV 236 (313)
T ss_pred HHHHHHHHHHHHHHhhCcHHHHHHhhcCcCceEcCCCCcccEEEeC-CcEEEEECcccccCCcHHHHHHHHHHHHHhccC
Confidence 11 111111 11111134679999999999999987 457999995 7899999999964 23 23
Q ss_pred CC----hhhHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294 270 FG----GSFYNSYFEVMPKQPGFEKRRDLYMLY 298 (328)
Q Consensus 270 ~~----~~f~~~Y~~~~pl~~~~~~r~~ly~l~ 298 (328)
++ ..|+++|++..|+++...+.+..+.++
T Consensus 237 ~d~~~~~~~l~gY~~~~~L~~~e~~~l~~~l~~ 269 (313)
T TIGR02906 237 WDLEKAKEIIEAYSSINPLSKEEKEVLYIDLAF 269 (313)
T ss_pred CCHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence 54 479999999999987655555544433
No 20
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.88 E-value=5.8e-21 Score=172.59 Aligned_cols=212 Identities=14% Similarity=0.064 Sum_probs=137.2
Q ss_pred cCCCcceeeeeeeCCcccceeEEEEeC-CccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 47 EGKATHITKICPVGGGCINLASRYGTD-AGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 47 ~~~~~~i~~v~~i~~G~~n~~y~v~~~-~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
.|+...+.++...+.|..|.+|++... +++||+|+++.. ....+++|+++|+.|+++.++|||+++..+ ..++
T Consensus 7 ~~~~~~~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~-----~~~~ 81 (276)
T cd05152 7 HGLTLKPETLSLNESGLDFQVVFAKDTDGVPWVLRIPRRPDVSERAAAEKRVLALVRKHLPVQVPDWRVHT-----PELI 81 (276)
T ss_pred cCCccCCCcceecCCcceeEEEEEEcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhcCCCCCCceeeec-----CceE
Confidence 366666777888888889999999764 448999999753 245578999999999987788999876543 3477
Q ss_pred EEeeecCCCCC--------------------ccHHHHHHHHHHHHhcCCCC-CCCCCCCCCcccccccCCCCcccHHHHH
Q 020294 125 IMEFIEFGSSR--------------------GNQSVFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKWTSNWIEFY 183 (328)
Q Consensus 125 v~e~l~G~~~~--------------------~~~~~lg~~La~lH~~~~~~-~~~g~~~~~~~g~~~~~~~~~~~w~~~~ 183 (328)
+|++++|.+.. ..+.++|+.|++||+.+... ...|++.. ..+...+.+
T Consensus 82 ~y~~i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~g~~~~-----------~~~~~~~~~ 150 (276)
T cd05152 82 AYPKLPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAAGIPVE-----------TPEEVRQTM 150 (276)
T ss_pred EEeccCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhccccCCCCC-----------CHHHHHHHH
Confidence 88888887531 13578999999999987632 11121100 011111111
Q ss_pred HHhhhHHHHHHHHhh-CCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEccc-cccCCchh
Q 020294 184 AEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPA-CYYGHNEA 260 (328)
Q Consensus 184 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID~~-~~~G~p~~ 260 (328)
. ..+. ..... .....+ ++++.+.++..... +.+++||||||+++||+++++ +..+||||+ +++|||.+
T Consensus 151 ~-~~l~----~~~~~~~~~~~l---~~~~~~~L~~~~~~-~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~ 221 (276)
T cd05152 151 A-DRMD----RVKEEFGVSEAL---WNRWQAWLDDDSYW-PRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPAR 221 (276)
T ss_pred H-HHHH----HHHHhcCCCHHH---HHHHHHHHhhcCCC-CCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHH
Confidence 1 1122 11111 112222 22233323211011 357899999999999999874 446899995 68999999
Q ss_pred hhhhhh-hc--CCChhhHHHHhhhCC
Q 020294 261 EFGMSW-CA--GFGGSFYNSYFEVMP 283 (328)
Q Consensus 261 DLa~~~-~~--~~~~~f~~~Y~~~~p 283 (328)
||+.++ +. ...+.|+++|.+..+
T Consensus 222 Dla~~~~~~~~~~~~~~~~~Y~~~~g 247 (276)
T cd05152 222 DFVLHYRIFGEAGLERLIDAYEAAGG 247 (276)
T ss_pred HHHHHHHhcChHHHHHHHHHHHHcCC
Confidence 999763 22 234789999998765
No 21
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.87 E-value=1.3e-20 Score=164.39 Aligned_cols=191 Identities=18% Similarity=0.222 Sum_probs=128.2
Q ss_pred eeeeeCCcccceeEEEEeCC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e 127 (328)
.++++++|..|.+|++++.+ .+||+|+.+.. ....+..|+++++.+++. ++++|+++...... .+..++|||
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccCCceEEEE
Confidence 46889999999999999987 59999998753 245688999999999986 78999999887542 246799999
Q ss_pred eecCCCCCc--------------cHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHH
Q 020294 128 FIEFGSSRG--------------NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK 193 (328)
Q Consensus 128 ~l~G~~~~~--------------~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~ 193 (328)
|++|..+.. .+.++++.|++||...... .+.... +. . ..+. . ..+..+.+
T Consensus 81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--~~~~~~---~~------~-~~~~---~-~~~~~~~~ 144 (223)
T cd05154 81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAA--VGLGDL---GR------P-GGYL---E-RQVARWRR 144 (223)
T ss_pred EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhh--cCCccc---CC------C-CchH---H-HHHHHHHH
Confidence 999986521 1478999999999988632 221100 00 0 0000 0 11222211
Q ss_pred HHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecC--CCCeEEEccc-cccCCchhhhhhh
Q 020294 194 LALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK--NGEPVILDPA-CYYGHNEAEFGMS 265 (328)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~--~~~~~iID~~-~~~G~p~~DLa~~ 265 (328)
........ ....++++.+.+.+.+.. ..+.++||||++++||++++ ++.++||||+ +.+|+|++||+.+
T Consensus 145 ~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~ 216 (223)
T cd05154 145 QYDASRTD--EPPAMERLLRWLEAHLPA-DSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWL 216 (223)
T ss_pred HHHhhccc--ccHHHHHHHHHHHhhCCC-CCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHH
Confidence 11111000 011223333333333333 25789999999999999988 5557999995 6899999999975
No 22
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=99.85 E-value=3.2e-20 Score=164.02 Aligned_cols=194 Identities=16% Similarity=0.182 Sum_probs=121.3
Q ss_pred eeeeeCCcccceeEEEEeCC---ccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 55 KICPVGGGCINLASRYGTDA---GSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~---~~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
+++++.||.+|.+|+|++.+ ++||+|++..... ...+.|..+++.+++. ++ +|+++.... .+++|||+
T Consensus 2 ~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~-gl-~P~v~~~~~-----~~~l~e~i 74 (235)
T cd05157 2 TFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH-GL-APKLYATFQ-----NGLIYEFI 74 (235)
T ss_pred eEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC-CC-CCeEEEEeC-----CcEEEEee
Confidence 58899999999999999873 5899999875322 2345799999999886 45 899986542 25899999
Q ss_pred cCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHh--hCC
Q 020294 130 EFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD--QYG 200 (328)
Q Consensus 130 ~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~--~~~ 200 (328)
+|.++. ....++|+.|+++|...... ..... ..+....| +....+... +......... ...
T Consensus 75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~---~~~~~----~~~~~~~~-~~i~~~~~~--~~~~~~~~~~~~~~~ 144 (235)
T cd05157 75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPE---AISSP----GTPKPILW-PTIRKWINL--VPTEFKKPEKFQKKT 144 (235)
T ss_pred CCCcCCHHHccChHHHHHHHHHHHHHhcccccc---ccccc----CCCCCcHH-HHHHHHHHH--hHHhhccccchhhhh
Confidence 998753 24688999999999988632 11000 00000001 111111110 1100000000 000
Q ss_pred ChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecC-CCCeEEEccc-cccCCchhhhhhh
Q 020294 201 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK-NGEPVILDPA-CYYGHNEAEFGMS 265 (328)
Q Consensus 201 ~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~-~~~~~iID~~-~~~G~p~~DLa~~ 265 (328)
.....+.+.+.++.+...+.....+.++||||++++|||+++ ++.+.+|||+ +++|+|.+|||..
T Consensus 145 ~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~ 211 (235)
T cd05157 145 KAISFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANH 211 (235)
T ss_pred ccccHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHH
Confidence 000122233333333333333235679999999999999997 4668999995 8899999999975
No 23
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=99.84 E-value=5.7e-20 Score=169.19 Aligned_cols=238 Identities=13% Similarity=0.094 Sum_probs=145.3
Q ss_pred HHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccce-eccccC-
Q 020294 41 REWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF-KVGALP- 118 (328)
Q Consensus 41 ~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~-~~~~~~- 118 (328)
++++.++++ ++.+++++ .|.||+|.|++|.|+||.... ..+.+.....++++|+++ |+++|.++ ......
T Consensus 2 ~~vl~~Y~l--~v~~i~~~----~~~v~~v~T~~G~~~Lk~~~~-~~~~l~~~~~~~~~L~~~-G~~~~~~~~~t~~G~~ 73 (309)
T TIGR02904 2 EAVLEHYGL--QPEEMEQV----TGKLFKVYTDQGVFALKKLYA-DRNTIESFVSQIQVLSEK-GFSRIVPVYPTKDGSY 73 (309)
T ss_pred hhhHhhcCC--Cceeeecc----cCcEEEEEeCCCCEEEEEecc-chHhHHHHHHHHHHHHHc-CCCcCCceeecCCCCe
Confidence 456666644 57776443 568999999999999999873 344456678888999887 78766666 332221
Q ss_pred ----CCceEEEEeeecCCCC---CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHH
Q 020294 119 ----TGGSYIIMEFIEFGSS---RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQ 191 (328)
Q Consensus 119 ----~~~~~~v~e~l~G~~~---~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~ 191 (328)
.+.++++|+|++|... ..++.++|+.||+||.++....... ..... .+ ...+...|..... .+...
T Consensus 74 ~~~~~~~~~~L~~wi~G~~~~~~~~~~~~~~~~LA~lH~~~~~~~~~~--~~~~~--~~-~~~~~~~~~~~~~--~l~~~ 146 (309)
T TIGR02904 74 YLFHGHFLYYLMPWLDIERNEERNYQHESMFQELALLHRKTVKTERVT--EEELK--KH-YERTLSRWENIPE--GLEEF 146 (309)
T ss_pred eeEECCEEEEEeCCcccccccCCHHHHHHHHHHHHHHHHhhhCCCccc--HhHHH--hH-HHHHHHHHHHHHH--HHHHH
Confidence 4668999999999643 1457999999999999997421111 00000 00 0011122221110 11222
Q ss_pred HHHHHh-hCCCh----------HHHHHHHHHHHHhhhhc----cCCCCCCceeccCCCCCCeeecCCCCeEEEccc-ccc
Q 020294 192 LKLALD-QYGDS----------TIYQRGHRLMKNLAPLF----EGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYY 255 (328)
Q Consensus 192 ~~~~~~-~~~~~----------~~~~~~~~~~~~l~~~l----~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~ 255 (328)
.+.... ...++ ...+.++.+++.+..+. .....+.+|||||++++|+|+++++..+||||+ +++
T Consensus 147 ~~~~~~~~~~~~fe~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 147 IVEAEAKWYMSPFELQACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 111111 01110 11122333333333221 111357799999999999999888888999995 789
Q ss_pred CCchhhhhhhhh-----cCCC----hhhHHHHhhhCCCCCCHHHHHH
Q 020294 256 GHNEAEFGMSWC-----AGFG----GSFYNSYFEVMPKQPGFEKRRD 293 (328)
Q Consensus 256 G~p~~DLa~~~~-----~~~~----~~f~~~Y~~~~pl~~~~~~r~~ 293 (328)
|+|+.||+.... .++. .+++++|++..|+++...+.+.
T Consensus 227 d~~~~DLa~~~~~~~~~~~~~~~~~~~~l~~Y~~~~pL~~~E~~~l~ 273 (309)
T TIGR02904 227 ASPLTDLAAFFRRSFGTYPQPIDEMFEWFYTYEKTLPLTDEEIHLLT 273 (309)
T ss_pred CCcHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999995421 2343 5899999999999865333333
No 24
>PRK06149 hypothetical protein; Provisional
Probab=99.84 E-value=2.6e-19 Score=186.85 Aligned_cols=236 Identities=15% Similarity=0.162 Sum_probs=157.1
Q ss_pred CChhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhc-CCCCcccc
Q 020294 35 LSDDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYET-RTIRAPRP 111 (328)
Q Consensus 35 ~~~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~-~~v~VP~~ 111 (328)
++.+++++++.+. |+. ..+.+++ |..|.+|+|++++++||||+.++. ....+..|.+++++|++. .++|||+|
T Consensus 17 ls~~~~~~ll~~~ygl~---~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~~~~~l~~e~~~l~hL~~~~~glpvp~p 92 (972)
T PRK06149 17 VSEAQAERILAEHYGLS---GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAYAAVELEAQHAALRHLAEREPALRVPVV 92 (972)
T ss_pred CCHHHHHHHHHHhcCCc---eEEEecC-CcCcceEEEEecCCcEEEEeCCccCChHHHHHHHHHHHHHHhhCCCCCCcee
Confidence 7899999999655 553 2356674 677999999999899999999742 345678899999999986 37999999
Q ss_pred eeccccC---------CCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 020294 112 FKVGALP---------TGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW 175 (328)
Q Consensus 112 ~~~~~~~---------~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~ 175 (328)
+...... .+..+.+++|++|.+.. ...+++|+.+|+||.+..+ |. .+... ....|
T Consensus 93 i~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~al~~---f~--hp~~~----r~~~W 163 (972)
T PRK06149 93 IPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVARALAD---FD--HPGLD----RTLQW 163 (972)
T ss_pred eECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHHHHcC---CC--CCCCC----Ccccc
Confidence 9764331 13457899999997652 3478999999999999974 32 22110 01123
Q ss_pred cccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH----HHhhhhccCCCCCCceeccCCCCCCeeecCCC-----Ce
Q 020294 176 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM----KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EP 246 (328)
Q Consensus 176 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-----~~ 246 (328)
... +.....+.......+++.++.+++.+ +++..... ..+..+||+|++.+||+++++. ..
T Consensus 164 dl~--------~~~~~~~~ll~~i~d~~~r~~l~~~~~~~~~~l~~~~~--~L~~g~IH~Dl~~~Nilv~~~~~~~~~v~ 233 (972)
T PRK06149 164 DLR--------HAGPVVAHLLSHITDPAQRARIAEATRDAARRLQPLAP--ALPLQAVHLDITDDNVVGSRDADGRWQPD 233 (972)
T ss_pred chh--------hhHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhhhhhh--hCcccccCCCCCcccEEEcCCCCCCccee
Confidence 110 01111111111112322233333333 33333333 3578899999999999998652 25
Q ss_pred EEEcc-ccccCCchhhhhhh---hhc--CCC----hhhHHHHhhhCCCCCCHHHHHH
Q 020294 247 VILDP-ACYYGHNEAEFGMS---WCA--GFG----GSFYNSYFEVMPKQPGFEKRRD 293 (328)
Q Consensus 247 ~iID~-~~~~G~p~~DLa~~---~~~--~~~----~~f~~~Y~~~~pl~~~~~~r~~ 293 (328)
+|||| ++++++..+|||++ ++. ... ..|++||++++|+++.+.+.+.
T Consensus 234 giIDFgD~~~~~~i~DLAial~~~~~~~~~dp~~~~~~l~GY~svrpLt~~E~~~L~ 290 (972)
T PRK06149 234 GVIDFGDLVRTWRVADLAVTCASLLHHAGGDPFSILPAVRAYHAVRPLSEAELKALW 290 (972)
T ss_pred EEEEcccchhhhHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 89999 68999999999975 231 111 3699999999999976554433
No 25
>PRK06148 hypothetical protein; Provisional
Probab=99.84 E-value=3.6e-19 Score=186.01 Aligned_cols=237 Identities=14% Similarity=0.134 Sum_probs=159.4
Q ss_pred CChhHHHHHHHhc-CCCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhc-CCCCccc
Q 020294 35 LSDDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYET-RTIRAPR 110 (328)
Q Consensus 35 ~~~~~i~~~l~~~-~~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~-~~v~VP~ 110 (328)
++.+++++.+.+. |+. ..+++++ |..|.+|+|+++++ .||||+.++. ....++.|.++|++|++. .++|||+
T Consensus 11 ~s~~~~~~~~~~~ygl~---~~~~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~ 86 (1013)
T PRK06148 11 FTTKDAEALLAQHFGIS---ATATPLD-GERDLNFRLTTDDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPR 86 (1013)
T ss_pred CCHHHHHHHHHHHcCCc---eEEeecC-CcCCceEEEEeCCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCe
Confidence 6889999999887 443 2467785 56799999999877 8999999753 345567788899999875 4689999
Q ss_pred ceeccccC--------CC--ceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCC
Q 020294 111 PFKVGALP--------TG--GSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQIN 173 (328)
Q Consensus 111 ~~~~~~~~--------~~--~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~ 173 (328)
|+...... +| ..+.+++|++|.++. ...+++|+.||+||.+... |..+.. . ...
T Consensus 87 ~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~---F~~p~~--~----r~~ 157 (1013)
T PRK06148 87 LIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQG---FMHPGA--L----RDL 157 (1013)
T ss_pred eeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhc---CCCCCc--c----ccc
Confidence 99764321 23 467899999998652 3479999999999999753 432211 0 112
Q ss_pred CCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhh----hccCCCCCCceeccCCCCCCeeecCCC---Ce
Q 020294 174 KWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP----LFEGVNVEPCLLHGDLWSGNISSDKNG---EP 246 (328)
Q Consensus 174 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~l~~~~~~~~LiHgDl~~~Nil~~~~~---~~ 246 (328)
.|...... .+...+. ...+++.++.++++++.+.+ .+. ..+..+||||++++||++++++ ..
T Consensus 158 ~Wdl~~~~-----~l~~~l~----~i~d~~~r~~l~~~~~~~~~~v~p~l~--~Lp~~vIHgDln~~NiLv~~~~~~~is 226 (1013)
T PRK06148 158 DWDLRHAG-----RARDRLH----FIDDPEDRALVERFLARFERNVAPRLA--ALPAQVIHNDANDYNILVDADDGERIS 226 (1013)
T ss_pred ccccccch-----hhhhhhh----hcCCHHHHHHHHHHHHHHHHHHHHHHh--cCCcceECCCCCcccEEEcCCCCcceE
Confidence 23211000 1111111 11233334445555444332 233 3577899999999999999773 46
Q ss_pred EEEcc-ccccCCchhhhhhhh--h--cCCC-----hhhHHHHhhhCCCCCCHHHHHHHH
Q 020294 247 VILDP-ACYYGHNEAEFGMSW--C--AGFG-----GSFYNSYFEVMPKQPGFEKRRDLY 295 (328)
Q Consensus 247 ~iID~-~~~~G~p~~DLa~~~--~--~~~~-----~~f~~~Y~~~~pl~~~~~~r~~ly 295 (328)
+|||| ++++++..+|||++. + .... .+|++||++++|+++.+.+.+..+
T Consensus 227 GiIDFgDa~~~~~v~DLAialay~~~~~~~p~~~~~a~laGY~sv~pLt~~E~~~L~~l 285 (1013)
T PRK06148 227 GLIDFGDAVHAPRICEVAIAAAYAILDHPDPIGAAAALVAGYHAVYPLQAQELDLLFDL 285 (1013)
T ss_pred EEEECcccccccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 89999 688999999999752 2 1111 369999999999997655544443
No 26
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=99.83 E-value=2.1e-19 Score=164.82 Aligned_cols=196 Identities=15% Similarity=0.152 Sum_probs=120.0
Q ss_pred eeeeeCCcccceeEEEEeCC--------ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 55 KICPVGGGCINLASRYGTDA--------GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~--------~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
+++++.||.+|.+|+|+..+ ++||+|++.... ......|.++++.|++. + .+|+++.... ..+
T Consensus 2 ~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~-g-~~P~~~~~~~-----~~~ 74 (302)
T cd05156 2 EVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER-N-LGPKLYGIFP-----NGR 74 (302)
T ss_pred eEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC-C-CCCceEEEeC-----CCc
Confidence 57889999999999999875 589999987532 24467899999999987 3 5899998864 257
Q ss_pred EEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHh
Q 020294 125 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD 197 (328)
Q Consensus 125 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~ 197 (328)
|++|++|..+. ....++++.|++||+..... .+.... ..+....+.+.|..... ..........+
T Consensus 75 v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 146 (302)
T cd05156 75 IEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPL--SPEERD----LTPAIWKLLKQWLDLAE--TVIEIVDSDSE 146 (302)
T ss_pred hhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCC--CCCcCc----ccchHHHHHHHHHHHhh--hhhhhcccchh
Confidence 99999998753 24689999999999998631 010000 00000000011111000 00000000000
Q ss_pred hCCCh---HHHHHHHHHHHHhhhhccC-CCCCCceeccCCCCCCeeecCC----CCeEEEcc-ccccCCchhhhhhh
Q 020294 198 QYGDS---TIYQRGHRLMKNLAPLFEG-VNVEPCLLHGDLWSGNISSDKN----GEPVILDP-ACYYGHNEAEFGMS 265 (328)
Q Consensus 198 ~~~~~---~~~~~~~~~~~~l~~~l~~-~~~~~~LiHgDl~~~Nil~~~~----~~~~iID~-~~~~G~p~~DLa~~ 265 (328)
..... ...+.+.++.+.+...... ...+.++|||||+++|||++++ +...+||| .+.+|+|.+|||..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~ 223 (302)
T cd05156 147 KLLEVELSLFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANH 223 (302)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHH
Confidence 00000 0111222222222221110 1367899999999999999874 66899998 58899999999975
No 27
>PRK12396 5-methylribose kinase; Reviewed
Probab=99.82 E-value=1.9e-19 Score=167.41 Aligned_cols=218 Identities=15% Similarity=0.152 Sum_probs=142.8
Q ss_pred hhhhhhcCChhHHHHHHHhc-CC--CcceeeeeeeCCcccceeEEEEeC--CccEEEEecCCC---------CcchHHHH
Q 020294 28 RTFAMAALSDDPIREWILSE-GK--ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFEGE 93 (328)
Q Consensus 28 ~~~~~~~~~~~~i~~~l~~~-~~--~~~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---------~~~~~~~E 93 (328)
.|..|..|+.+.+.+++.+. +. ......++++|+|..|.||||... .+++|||.+.+. +.++...|
T Consensus 3 ~~~~y~~l~~~~v~~yl~~~l~~~~~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E 82 (409)
T PRK12396 3 KFTKYFLMEANDVIVYVKEKLSKFEHAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIE 82 (409)
T ss_pred ccccceeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHH
Confidence 35567789999999999885 42 223345999999999999999864 468999998531 24566789
Q ss_pred HHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC-----------CccHHHHHHHHHHHHhcCCCCCCCCCCC
Q 020294 94 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDV 162 (328)
Q Consensus 94 ~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g~~~ 162 (328)
.++|+.+++..+-.||++|.++. ....+|||+++.... +..++++|+.||+.|..... ++.+.
T Consensus 83 ~~aL~~~~~~~P~~VP~vy~~D~---e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd---~~l~~ 156 (409)
T PRK12396 83 SDVLQLEEELAPGLVPKVYLFDS---VMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSD---VVMNH 156 (409)
T ss_pred HHHHHHHHhhCCCcCCeEEEECc---HHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcch---hccCh
Confidence 99999998875666999999985 588999999976321 24579999999999886542 11110
Q ss_pred CC-------------------cccccccCCCC-cccHHHHHHHhhhHHHHHHHHhh-CCChHHHHHHHHHHHHhhhhccC
Q 020294 163 DN-------------------TIGSTPQINKW-TSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEG 221 (328)
Q Consensus 163 ~~-------------------~~g~~~~~~~~-~~~w~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~ 221 (328)
.. ..-.-|..+.. ..++ ..+.+....+. ..|.+++..+.++ +..|-
T Consensus 157 ~~kk~~v~~f~N~eLc~itedlvft~Py~~~~~~n~~--------~~~~~~~~~~~l~~D~~Lk~ev~~L----k~~F~- 223 (409)
T PRK12396 157 KEKKELVKNYINPELCEITEDLVYAEPFTNHNKRNEL--------FPLNEGWIREHIYSDKELRLEVAKL----KFSFM- 223 (409)
T ss_pred HHHHHhhHhcCCHHHHHHhcccccccCcccchhccCC--------CChhhHHHHHHHhcCHHHHHHHHHH----HHHHH-
Confidence 00 00000110000 0000 11111111111 1233333333333 33333
Q ss_pred CCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh
Q 020294 222 VNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW 266 (328)
Q Consensus 222 ~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~ 266 (328)
....+|||||||+|||++++++ +.|||++ ++|||+.|||+.+.
T Consensus 224 -~~~~aLlHGDlHtGSI~v~~~~-~kvIDpEFAfyGP~gFDiG~~l 267 (409)
T PRK12396 224 -TNAQALIHGDLHTGSVFVKNDS-TKVIDPEFAFYGPMGYDIGNVM 267 (409)
T ss_pred -hcchhhccCcCCCCCEEecCCc-eEEEcccccccCCcHHHHHHHH
Confidence 2467999999999999998765 8999985 68999999999753
No 28
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.82 E-value=4.5e-19 Score=148.38 Aligned_cols=159 Identities=20% Similarity=0.184 Sum_probs=109.9
Q ss_pred eeeeeCCcccceeEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 55 KICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
.++++++|.+|.+|+++..+++|++|+++... ...++.|+..++.+.+. ..+|+++..+. ...++||||++|.
T Consensus 2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~--~~~P~~~~~~~---~~~~lv~e~i~G~ 76 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEA--GIGPKLYYFDP---ETGVLITEFIEGS 76 (170)
T ss_pred ceeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHh--CCCCceEEEeC---CCCeEEEEecCCC
Confidence 47889999999999999988899999987542 24468899999999875 35899998764 3568999999998
Q ss_pred CCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH
Q 020294 133 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 212 (328)
Q Consensus 133 ~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 212 (328)
++... ... . . . .. +.+.+.+
T Consensus 77 ~l~~~--------------~~~----------------------~--~-----~-~~----------------~~l~~~l 96 (170)
T cd05151 77 ELLTE--------------DFS----------------------D--P-----E-NL----------------EKIAKLL 96 (170)
T ss_pred ccccc--------------ccc----------------------C--H-----H-HH----------------HHHHHHH
Confidence 64210 000 0 0 0 00 0001111
Q ss_pred HHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh-cCCC----hhhHHHHhhhC
Q 020294 213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGFG----GSFYNSYFEVM 282 (328)
Q Consensus 213 ~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~-~~~~----~~f~~~Y~~~~ 282 (328)
.++- .....+.++||||++++||+++ ++...+|||+ +.+|+|.+||+.++. ..++ ..|++.|....
T Consensus 97 ~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~~~Dla~~~~~~~~~~~~~~~~~~~y~~~~ 168 (170)
T cd05151 97 KKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDPLFDLANFFSEAKLSEDQEEELLEAYFGRE 168 (170)
T ss_pred HHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCChHHHHHHHHHhcCCCHHHHHHHHHHHhCCC
Confidence 1111 1001267899999999999998 4458899996 679999999997642 2333 46889997654
No 29
>PLN02236 choline kinase
Probab=99.79 E-value=4.1e-17 Score=152.13 Aligned_cols=199 Identities=18% Similarity=0.129 Sum_probs=128.4
Q ss_pred hhHHHHHHHhcCCC------cceeeeeeeCCcccceeEEEEeCC------ccEEEEecCCCCcch--HHHHHHHHHHHHh
Q 020294 37 DDPIREWILSEGKA------THITKICPVGGGCINLASRYGTDA------GSFFVKTNRSIGPSM--FEGEALGLGAMYE 102 (328)
Q Consensus 37 ~~~i~~~l~~~~~~------~~i~~v~~i~~G~~n~~y~v~~~~------~~~vlK~~~~~~~~~--~~~E~~~l~~L~~ 102 (328)
...|.+++.+..+. ....+++++.||.+|.+|+++..+ .+||+|++....... .+.|..+++.+++
T Consensus 16 ~~~~~~~~~~~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~ 95 (344)
T PLN02236 16 PDELKRILHSLASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSR 95 (344)
T ss_pred hHHHHHHHHHhcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHH
Confidence 34466666665333 246789999999999999998532 379999997543222 3679999999998
Q ss_pred cCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 020294 103 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW 175 (328)
Q Consensus 103 ~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~ 175 (328)
. ++ .|+++..... ..|++|++|.++. ....++++.|+++|+...+. ....
T Consensus 96 ~-gl-~P~~~~~~~~-----g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~----~~~~------------ 152 (344)
T PLN02236 96 H-GQ-GPRLLGRFPN-----GRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPG----PKNV------------ 152 (344)
T ss_pred c-CC-CCceEEEECC-----ceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCC----CCCc------------
Confidence 6 45 8999877632 2689999998763 23579999999999987521 0000
Q ss_pred cccHHHHHHHhhhHHHHHHHHhhCCCh----HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEc
Q 020294 176 TSNWIEFYAEHRLGYQLKLALDQYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILD 250 (328)
Q Consensus 176 ~~~w~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID 250 (328)
+-|. ++..+++...+...+. .....+.+.++.+...+.....+.++||+|++++|||++++ +...+||
T Consensus 153 -~~~~------~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID 225 (344)
T PLN02236 153 -LLWD------RLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIID 225 (344)
T ss_pred -hHHH------HHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEe
Confidence 1111 1222221111110000 00122233333333333322357799999999999999864 5689999
Q ss_pred cc-cccCCchhhhhhh
Q 020294 251 PA-CYYGHNEAEFGMS 265 (328)
Q Consensus 251 ~~-~~~G~p~~DLa~~ 265 (328)
|+ +.+|+|.+|||..
T Consensus 226 ~Eya~~~~~~~Dia~~ 241 (344)
T PLN02236 226 YEYASYNPVAYDIANH 241 (344)
T ss_pred ehhccccchHHHHHHH
Confidence 85 7899999999975
No 30
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=99.76 E-value=1e-16 Score=148.74 Aligned_cols=200 Identities=18% Similarity=0.232 Sum_probs=130.2
Q ss_pred ceeeeeeeCCcccceeEEEEeCCc-----cEEEEecCCCCcc--hHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 52 HITKICPVGGGCINLASRYGTDAG-----SFFVKTNRSIGPS--MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~-----~~vlK~~~~~~~~--~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
...+++++.||.+|.+|+++..++ +||+|++...+.. ..+.|..+++.+++. ++ .|+++.... .| +
T Consensus 15 ~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~-gl-~P~~l~~~~--~G---~ 87 (330)
T PLN02421 15 SDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAA-GF-GAKLLGVFG--NG---M 87 (330)
T ss_pred CceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhc-CC-CCceeEEeC--Cc---E
Confidence 467899999999999999986432 8999999754322 236799999999986 34 588887753 22 6
Q ss_pred EEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHh
Q 020294 125 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD 197 (328)
Q Consensus 125 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~ 197 (328)
|.+|++|..+. .....+++.|+++|+...+. . ..+ .-|. ++..+++.+..
T Consensus 88 i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~---~-~~~-------------~~~~------~i~~y~~~~~~ 144 (330)
T PLN02421 88 IQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPG---S-KEP-------------QLWN------DIFKFYEKAST 144 (330)
T ss_pred eehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCC---C-CCC-------------cHHH------HHHHHHHHhhh
Confidence 99999998763 24689999999999987521 0 000 0111 12222222111
Q ss_pred h-CCChHH--------HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEcc-ccccCCchhhhhhhh
Q 020294 198 Q-YGDSTI--------YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDP-ACYYGHNEAEFGMSW 266 (328)
Q Consensus 198 ~-~~~~~~--------~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID~-~~~~G~p~~DLa~~~ 266 (328)
. ..+++. ...+.+.+..+..++.....+.++||+|+.++|||++++ +...+||| .+.+++|.+|||...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f 224 (330)
T PLN02421 145 VKFEDPEKQKKYETISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHF 224 (330)
T ss_pred cccCcHHHhhhhcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHH
Confidence 0 011100 112222333344444332467899999999999999754 56899998 589999999999753
Q ss_pred h--cCC--------C----hhhHHHHhhh
Q 020294 267 C--AGF--------G----GSFYNSYFEV 281 (328)
Q Consensus 267 ~--~~~--------~----~~f~~~Y~~~ 281 (328)
+ .++ + ..|++.|...
T Consensus 225 ~E~~~~~~~~~~~p~~~~~~~fl~~Y~~~ 253 (330)
T PLN02421 225 NEYAGFDCDYSLYPSKEEQYHFFRHYLRP 253 (330)
T ss_pred HHHcccccCcccCcCHHHHHHHHHHhCCc
Confidence 2 222 2 2589999864
No 31
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=99.76 E-value=1.9e-17 Score=152.35 Aligned_cols=195 Identities=20% Similarity=0.229 Sum_probs=120.4
Q ss_pred eeCCcccceeEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 58 PVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.+|+|..|.||||..+++ ++|||.+.+. +.++...|.+.|+.+++..+-.||++|.++. ....++
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~---e~~~~v 78 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT---EMAVTV 78 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc---ccceeh
Confidence 479999999999998764 8999998631 2355678999999888764445999999985 578899
Q ss_pred EeeecCCCC-----------CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccc-cCCC----------CcccHHHHH
Q 020294 126 MEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP-QINK----------WTSNWIEFY 183 (328)
Q Consensus 126 ~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~-~~~~----------~~~~w~~~~ 183 (328)
||+++.... +..++++|+.||+.|..... +..+......... ..|. ..+.+.+..
T Consensus 79 MEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd---~~~~~~~kk~l~~~f~N~eLc~itEdlvft~py~~~~ 155 (370)
T TIGR01767 79 MEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSD---YALEPKVKKALVAQFTNPELCDITERLVFTDPYFDHD 155 (370)
T ss_pred HhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcc---cccCHHHHHHHHHHhCCHHHHHHHHHhccccchhhhh
Confidence 999976431 24579999999999865532 2211100000000 0000 001110000
Q ss_pred HHhhhHHHHHHHHhhC-CChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhh
Q 020294 184 AEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAE 261 (328)
Q Consensus 184 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~D 261 (328)
..++.+.++...+.. .++++... ...++..+. ....+|||||||++||++.+++ +.+|||+ +.+|++.+|
T Consensus 156 -~n~~~p~l~~~~~~l~~d~~l~~~----v~~Lk~~f~--~~~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G~~~~D 227 (370)
T TIGR01767 156 -TNDFEEELRPFVAKLRNDDSLKIE----AAKLKHSFL--ASAETLLHGDLHSGSIFVSEHE-TKVIDPEFAFYGPIGFD 227 (370)
T ss_pred -hhcCChhHHHHHHHHhcCHHHHHH----HHHHHHhhc--cCcceeeeccCCcccEEEcCCC-CEEEcCcccccCchHhh
Confidence 011222222221111 12222222 223343333 2467999999999999997765 7899996 789999999
Q ss_pred hhhhh
Q 020294 262 FGMSW 266 (328)
Q Consensus 262 La~~~ 266 (328)
|+.+.
T Consensus 228 lg~~i 232 (370)
T TIGR01767 228 IGQFI 232 (370)
T ss_pred HHHHH
Confidence 99763
No 32
>PTZ00296 choline kinase; Provisional
Probab=99.68 E-value=9.9e-15 Score=139.73 Aligned_cols=206 Identities=11% Similarity=0.029 Sum_probs=127.1
Q ss_pred cCChhHHHHHHHhcCCCc------ceeeeeeeCCcccceeEEEEeCC----------ccEEEEecCCCCcch--HHHHHH
Q 020294 34 ALSDDPIREWILSEGKAT------HITKICPVGGGCINLASRYGTDA----------GSFFVKTNRSIGPSM--FEGEAL 95 (328)
Q Consensus 34 ~~~~~~i~~~l~~~~~~~------~i~~v~~i~~G~~n~~y~v~~~~----------~~~vlK~~~~~~~~~--~~~E~~ 95 (328)
.++.+.+..++.+.-+++ .| .++++.||.+|.+|++++.+ .+|++|++...+... ...|..
T Consensus 83 ~~~~~~~~~i~~~~vp~W~~~~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~ 161 (442)
T PTZ00296 83 LTDPLYIKKICLEKVPEWRRFTEDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFE 161 (442)
T ss_pred cCChHHHHHHHHHHCCccccCCcccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHH
Confidence 455556666665432222 44 89999999999999998752 379999997644322 356899
Q ss_pred HHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccc
Q 020294 96 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGS 168 (328)
Q Consensus 96 ~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~ 168 (328)
+++.|++. + ..|+++... ..+.|.+|++|.+++ .....+++.|+++|...... ..+. ..+.
T Consensus 162 v~~~ls~~-g-i~P~l~~~f-----~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~---~~~~--~f~~ 229 (442)
T PTZ00296 162 VYKTMSKY-R-IAPQLLNTF-----SGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKR---HLPE--HWDR 229 (442)
T ss_pred HHHHHHHC-C-CCCceEEEe-----CCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccc---cCch--hccC
Confidence 99999986 3 578888543 347899999998653 34689999999999986311 0000 0000
Q ss_pred cccCCCCcccHHHHHHHhhhHHHHHHHHhhC-CC------hHHHHHHHHHHHHhhh--hccCCCCCCceeccCCCCCCee
Q 020294 169 TPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GD------STIYQRGHRLMKNLAP--LFEGVNVEPCLLHGDLWSGNIS 239 (328)
Q Consensus 169 ~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~-~~------~~~~~~~~~~~~~l~~--~l~~~~~~~~LiHgDl~~~Nil 239 (328)
.| .-|. ++..+...+.... .. ..+.+.+..+.+.+.. .+.....+.++||+|+.++|||
T Consensus 230 ~p------~~f~------~i~~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL 297 (442)
T PTZ00296 230 TP------CIFK------MMEKWKNQLSKYKNIEKYQRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNII 297 (442)
T ss_pred CC------cHHH------HHHHHHHHHHhhccchHhHhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCcccee
Confidence 11 1111 1222222221110 00 0111122222221111 0112235789999999999999
Q ss_pred ecCCCCeEEEcc-ccccCCchhhhhhh
Q 020294 240 SDKNGEPVILDP-ACYYGHNEAEFGMS 265 (328)
Q Consensus 240 ~~~~~~~~iID~-~~~~G~p~~DLa~~ 265 (328)
.++++ ..+||| .+.+.+|.+|||..
T Consensus 298 ~~~~~-l~LIDfEYAg~ndpafDIAn~ 323 (442)
T PTZ00296 298 NTNKC-LRLIDFEYSGYNFLATDIANF 323 (442)
T ss_pred ecCCC-EEEEeecccccccHHHHHHHH
Confidence 86555 899998 58999999999965
No 33
>PTZ00384 choline kinase; Provisional
Probab=99.61 E-value=9.8e-14 Score=130.65 Aligned_cols=203 Identities=13% Similarity=0.065 Sum_probs=123.1
Q ss_pred hhHHHHHHHhcCCCc-----ceeeeeeeCCcccceeEEEEeCCc---c-----EEEEecCCCCcch--HHHHHHHHHHHH
Q 020294 37 DDPIREWILSEGKAT-----HITKICPVGGGCINLASRYGTDAG---S-----FFVKTNRSIGPSM--FEGEALGLGAMY 101 (328)
Q Consensus 37 ~~~i~~~l~~~~~~~-----~i~~v~~i~~G~~n~~y~v~~~~~---~-----~vlK~~~~~~~~~--~~~E~~~l~~L~ 101 (328)
...|.+++.+.-++. ....++++.||.+|.+|+|+.+++ . +++|++....... .+.|.++++.|+
T Consensus 31 ~~~~~~~~~~~~p~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls 110 (383)
T PTZ00384 31 HSNLKSLCIRHVPFWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLG 110 (383)
T ss_pred HHHHHHHHHHHCCccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHH
Confidence 344666666652222 346899999999999999986543 3 4555554322211 356899999999
Q ss_pred hcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCC
Q 020294 102 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK 174 (328)
Q Consensus 102 ~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~ 174 (328)
+. --.|+++.... .++++||++|+.+. .....+++.|+++|..... +. + . ..+..|
T Consensus 111 ~~--glgP~l~~~f~-----~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~---~~-p-~-~~~~~p---- 173 (383)
T PTZ00384 111 DN--NFGPKIIGRFG-----DFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTE---LV-P-K-EWDRTP---- 173 (383)
T ss_pred hC--CCCCeEEEecC-----CEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhccccc---CC-C-c-cccCcc----
Confidence 86 46889988764 37999999998763 2467999999999997642 10 0 0 000111
Q ss_pred CcccHHHHHHHhhhHHHHHHHH---hh---CCC-hHHHHHHHHHHHHhhhhccC---CCCCCceeccCCCCCCeeecCCC
Q 020294 175 WTSNWIEFYAEHRLGYQLKLAL---DQ---YGD-STIYQRGHRLMKNLAPLFEG---VNVEPCLLHGDLWSGNISSDKNG 244 (328)
Q Consensus 175 ~~~~w~~~~~~~~l~~~~~~~~---~~---~~~-~~~~~~~~~~~~~l~~~l~~---~~~~~~LiHgDl~~~Nil~~~~~ 244 (328)
..|. ++..+..... .. ..+ ..+.+.++++.+.+...+.. ...+.++||.|+.++|||.++++
T Consensus 174 --~~~~------~i~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~~~~ 245 (383)
T PTZ00384 174 --MFLT------KISTWSQHVERIIKKYNLDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDFNQG 245 (383)
T ss_pred --hHHH------HHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEecCCC
Confidence 1111 1111111110 00 011 11222223222222221211 02357999999999999986554
Q ss_pred CeEEEcc-ccccCCchhhhhhh
Q 020294 245 EPVILDP-ACYYGHNEAEFGMS 265 (328)
Q Consensus 245 ~~~iID~-~~~~G~p~~DLa~~ 265 (328)
+.+||| .+.+++|.+|||..
T Consensus 246 -l~lID~EYA~~n~~~fDLAn~ 266 (383)
T PTZ00384 246 -IYFIDFDFAGFNYVGWEIANF 266 (383)
T ss_pred -EEEEEeccccCCchHhHHHHH
Confidence 899998 58999999999965
No 34
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.60 E-value=3.5e-14 Score=119.68 Aligned_cols=170 Identities=14% Similarity=0.168 Sum_probs=106.1
Q ss_pred EEEeeecCCCCC--ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCC
Q 020294 124 IIMEFIEFGSSR--GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 201 (328)
Q Consensus 124 ~v~e~l~G~~~~--~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~ 201 (328)
++.||++|.+.+ ....++++.++++|..+. +|.+.+ . + .++..+.........+
T Consensus 1 llv~Wl~Ge~~~~~~~~~~La~~l~~LH~~p~----~~~~~~---------------l---~--~~i~~Yw~~l~~~~~~ 56 (188)
T PRK10271 1 MAVDYLPGEVKSYLPDTNELAGLLYHLHQQPR----FGWRIT---------------L---L--PLLEQYWQQSDPARRT 56 (188)
T ss_pred CcccccCCCcCCCccCHHHHHHHHHHHhcCCC----CCCCCC---------------H---H--HHHHHHHHHhccccCC
Confidence 468999999764 368999999999999775 442211 0 1 2344444444322223
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-ccccCCchhhhhhhhhcC--CChhhHHHH
Q 020294 202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWCAG--FGGSFYNSY 278 (328)
Q Consensus 202 ~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~~~G~p~~DLa~~~~~~--~~~~f~~~Y 278 (328)
+... +....+.......+.+.++||||++++|+++++++ ..+||| .+..|||.+||+.++... -.+.|++.|
T Consensus 57 ~~wl----~~~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~DLa~~~~~~~~~~~~~l~~Y 131 (188)
T PRK10271 57 PFWL----RMLKRLRKAGEPRPLRLAPLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDY 131 (188)
T ss_pred HHHH----HHHHHHHhcccCCCCCeeeecCCCCCccEEEECCC-EEEEeCCcccCCCHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3222 22333322222224678999999999999998877 789998 578999999999876431 124799999
Q ss_pred hhhCCCCCC-HHHHHHHHHHHHHHHHHHHh--------ccCcHHHHHHHHHHH
Q 020294 279 FEVMPKQPG-FEKRRDLYMLYHYLNHYNLF--------GSGYRSSALSIIDDY 322 (328)
Q Consensus 279 ~~~~pl~~~-~~~r~~ly~l~~~l~~~~~~--------~~~y~~~~~~~~~~~ 322 (328)
+...-.++. +..|..-+..+.......+| ...|...+.++.+++
T Consensus 132 ~~~~~~d~~~~~~~~~~W~p~~~~m~llWyev~~qq~~d~~fl~~a~~~~~~~ 184 (188)
T PRK10271 132 ATRAKIDAAQLWRQVRRWFPWVLMLKAGWFEYRWRQTGDQQFIRLADDTWRQL 184 (188)
T ss_pred hCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhh
Confidence 955334443 44555555444433333333 356766777666654
No 35
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=99.59 E-value=1.8e-13 Score=126.16 Aligned_cols=221 Identities=14% Similarity=0.118 Sum_probs=140.6
Q ss_pred HHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCC-cccceeccccC---
Q 020294 43 WILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIR-APRPFKVGALP--- 118 (328)
Q Consensus 43 ~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~-VP~~~~~~~~~--- 118 (328)
++.++ |..+.++++. | .+..+.|++|.|+||.....+.+.+.....++++|+++ |++ ||+++......
T Consensus 4 vl~~Y--~l~~~~~~~~--g---~~~~~~t~~g~y~Lk~~e~~~~~~l~f~~~~~~~L~~~-G~~~v~~~i~tk~G~~~~ 75 (313)
T TIGR02905 4 LYDQF--GLYCDERFRV--G---RYEAFRANNQAYLIVPVDGLEEEELAELMAMSDYLQQA-GDETVLELVKTKFGQSSA 75 (313)
T ss_pred hHHhh--CcCcccceec--C---ceeeEEeCCceEEEEEecCCCHHHHHHHHHHHHHHHHc-CCCcccceeecCCCCEeE
Confidence 44444 4568888876 3 35667899999999999654455677778889999987 686 99999875543
Q ss_pred --CCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH--hhhHHHHHH
Q 020294 119 --TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKL 194 (328)
Q Consensus 119 --~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~--~~l~~~~~~ 194 (328)
+|.++++++|++|..... ..+|+.||+||.++.. |..+... ...| ..|.+.+.. .+++...+.
T Consensus 76 ~~~g~~y~L~~w~~~~~~~~--~~~~~~LA~lH~as~~---f~~~~~~-------~~~~-~~~~~~~~k~~~el~~~~~~ 142 (313)
T TIGR02905 76 LIDGVSYYLFKAPEFNERRG--VDLGRELATFHKRGRQ---YPRPIWK-------KSRI-GQWKELWAKRLDQLEDWWQS 142 (313)
T ss_pred EECCEEEEEEeCCCcccchh--HHHHHHHHHHHHhcCC---CCCCccc-------cccc-cccHHHHHHHHHHHHHHHHH
Confidence 589999999987765322 3999999999999973 3222111 0112 344444432 123333322
Q ss_pred HHhhC-CCh-H---------HHHHHHHHHHHhh-----hhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCc
Q 020294 195 ALDQY-GDS-T---------IYQRGHRLMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHN 258 (328)
Q Consensus 195 ~~~~~-~~~-~---------~~~~~~~~~~~l~-----~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p 258 (328)
+.... .++ + ..+..++.++.+. ++-.. ....++||||+...|++ +++ ..++||++.++++|
T Consensus 143 ~~~~~~~s~Fd~~fl~~~d~~~~~a~~ai~~l~~s~y~~~~~~-~~~~~lCH~d~~~hn~l-~~~-~~~~i~~d~~~D~~ 219 (313)
T TIGR02905 143 LLAQGPQTLFDEQFLETFPYYLGLTENAIQYAADTELDDEPGL-ADSGTICHERFGETTWL-ERG-GLIKPPTEWVYDHP 219 (313)
T ss_pred HHhcCCCChHHHHHHHHhHHHHHHHHHHHHHHHHccchhhhhc-cccCccccCccCccccc-cCC-CeEecccccccccc
Confidence 22211 111 1 1122233333221 11111 24669999999999987 444 46788887779999
Q ss_pred hhhhhhh--h-h---cC--CC--hhhHHHHhhhCCCCCC
Q 020294 259 EAEFGMS--W-C---AG--FG--GSFYNSYFEVMPKQPG 287 (328)
Q Consensus 259 ~~DLa~~--~-~---~~--~~--~~f~~~Y~~~~pl~~~ 287 (328)
..||+.. . + .. +. ..++++|++..||++.
T Consensus 220 ~~DL~~firk~~~k~~~~~~~~~~~~l~~Y~~~~pL~~~ 258 (313)
T TIGR02905 220 ARDLAEWIRERYMGEIRQNQRAIASFLQEYEQAAPLTPF 258 (313)
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHhhhcCCCCHH
Confidence 9999954 1 2 11 22 4789999999999864
No 36
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=99.59 E-value=5.8e-14 Score=133.26 Aligned_cols=258 Identities=18% Similarity=0.261 Sum_probs=150.2
Q ss_pred hcCChhHHHHHHHhc-CCCc---ceeeeeeeC--CcccceeEEEEeC------C----ccEEEEecCC----------C-
Q 020294 33 AALSDDPIREWILSE-GKAT---HITKICPVG--GGCINLASRYGTD------A----GSFFVKTNRS----------I- 85 (328)
Q Consensus 33 ~~~~~~~i~~~l~~~-~~~~---~i~~v~~i~--~G~~n~~y~v~~~------~----~~~vlK~~~~----------~- 85 (328)
|.++++++++-|+.. +... +-.+++.|| .|.++.+.+|+.+ + .++|||+++. .
T Consensus 11 Thvtw~dve~~l~~~l~t~a~~g~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~ 90 (414)
T PF07914_consen 11 THVTWEDVEEALQEALGTKAKFGENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKF 90 (414)
T ss_pred CceeHHHHHHHHHHHhCCCcCcCCCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhcc
Confidence 778999999999887 3211 345677775 5679999999853 1 1799999852 0
Q ss_pred ------Cc------------chHHHHHHHHHHHHhc--CCCCcccceeccccCC---CceEEEEeeecCCCC-------C
Q 020294 86 ------GP------------SMFEGEALGLGAMYET--RTIRAPRPFKVGALPT---GGSYIIMEFIEFGSS-------R 135 (328)
Q Consensus 86 ------~~------------~~~~~E~~~l~~L~~~--~~v~VP~~~~~~~~~~---~~~~~v~e~l~G~~~-------~ 135 (328)
.. ..-.+|+..++.+... .++|+|++|......+ -.++++|||+++... +
T Consensus 91 ~~~~~~~~e~~~~~~~~~l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~~ 170 (414)
T PF07914_consen 91 EGGKGFDEEKEWEEFEKFLREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENLS 170 (414)
T ss_pred ccccccchhhHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCCC
Confidence 00 1113678888888766 4889999998765532 358999999999642 1
Q ss_pred -ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC-cccHHHHHHHhhhHHHHHHHHhhC---CChHHHHHHHH
Q 020294 136 -GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW-TSNWIEFYAEHRLGYQLKLALDQY---GDSTIYQRGHR 210 (328)
Q Consensus 136 -~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~-~~~w~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~ 210 (328)
.+..++.+.||++|+.+...+.-.. ....| ..+ ...+.+++....+........... .++.+.+.++.
T Consensus 171 ~eql~~iv~aLA~~~A~sl~ls~ee~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~ 243 (414)
T PF07914_consen 171 VEQLLQIVRALAKFHALSLKLSEEEK--KSISG-----PDFLEEMFGEFFSEEGMKKIFENLRKIFGFFSPEKLEELIEK 243 (414)
T ss_pred HHHHHHHHHHHHHHHHhHccCCHHHh--hhccC-----chHHHHHHHHHhchHHHHHHHHHHHhhccccChHHHHHHHHH
Confidence 4678899999999999874210000 00000 000 011122221111211111111111 01111122221
Q ss_pred HHH------------HhhhhccCCCCCCceeccCCCCCCeeecCCCC-----eEEEccc-cccCCchhhhhhhhhcCC--
Q 020294 211 LMK------------NLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE-----PVILDPA-CYYGHNEAEFGMSWCAGF-- 270 (328)
Q Consensus 211 ~~~------------~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~-----~~iID~~-~~~G~p~~DLa~~~~~~~-- 270 (328)
+.. .+...+ ..+++|||||||..|||+++++. .+||||. +..|.|..||+.+.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~i~~~l---G~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll~~~lS~ 320 (414)
T PF07914_consen 244 FEHYLPDIKNFEKASNINKQL---GIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLLVSCLSG 320 (414)
T ss_pred HHHhcccHHhHHHHhhhHHhc---CCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHHHhcCCH
Confidence 111 111222 35889999999999999998532 4899995 579999999997643222
Q ss_pred ------ChhhHHHHhhh----C----CCCCCHHHHHHHHHHHHH
Q 020294 271 ------GGSFYNSYFEV----M----PKQPGFEKRRDLYMLYHY 300 (328)
Q Consensus 271 ------~~~f~~~Y~~~----~----pl~~~~~~r~~ly~l~~~ 300 (328)
.+.+++.|.+. . ..+=.+++-...|+++..
T Consensus 321 edRR~~~~~lL~~Yy~~f~~~l~~~~~~PfT~eqL~~sY~l~fp 364 (414)
T PF07914_consen 321 EDRREHTEELLEYYYDTFTEALEDGGKAPFTLEQLKDSYRLYFP 364 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHH
Confidence 12344444222 1 112236777788886544
No 37
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=99.58 E-value=5.7e-14 Score=119.46 Aligned_cols=214 Identities=16% Similarity=0.161 Sum_probs=143.0
Q ss_pred eeeeCCcccc-eeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294 56 ICPVGGGCIN-LASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 56 v~~i~~G~~n-~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
.+++..|.+. .+|++..+.+ .+++|+.+......+..|++-+.|++.+ ++++|.|+..... .++.|++|+-++|.+
T Consensus 23 w~~v~~geS~~~v~rl~a~~r~g~~~k~~~~~~~a~L~~Ea~RlrWla~~-~l~~P~V~~~~~~-~~~~wLl~salpG~~ 100 (266)
T COG3231 23 WRRVTEGESGAGVFRLFADSRPGLYLKIASSGPAAELEGEAARLRWLAGQ-GLGCPRVLGLEDD-ADQAWLLMSALPGED 100 (266)
T ss_pred cceeeccCCCCeEEEEeccCCCceEEEEecCcchhhhhhHHHHHHHhccc-CCCCCceEeeccC-cchhHHhhhhcCCCc
Confidence 4556667655 7999987655 7899998765556789999999999997 7999999988764 578999999999987
Q ss_pred CC---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCC-h-
Q 020294 134 SR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD-S- 202 (328)
Q Consensus 134 ~~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~-~- 202 (328)
.. ..+..+++.|..||..+...+-|+.. .. .++...-+.......+ +
T Consensus 101 ~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aCPFd~r-----------------l~-----~rl~~a~~r~~a~~vdesd 158 (266)
T COG3231 101 ASHPRYALDPKRAVPLLAEALRRLHELPVEACPFDRR-----------------LA-----RRLAKARARVRAGLVDESD 158 (266)
T ss_pred ccchhhcCCHHHHHHHHHHHHHHHhcCChhhCCcchH-----------------HH-----HHHHHHHHHHhccCCChhh
Confidence 52 24678999999999987643323211 00 1111111000000011 0
Q ss_pred ---H-HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh-hh-----c--C
Q 020294 203 ---T-IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS-WC-----A--G 269 (328)
Q Consensus 203 ---~-~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~-~~-----~--~ 269 (328)
+ .-....++.+.+....+. ....++||||.-.-|+|+++++..++||.. ..+|++..||+.. |. + .
T Consensus 159 fd~e~qgr~~~El~d~L~~~rp~-~edLVv~HGDACLPN~i~d~~rf~GfIDlGrlGVaDRh~DLala~~s~~~nl~g~~ 237 (266)
T COG3231 159 FDEERQGRTAEELFDELEARRPA-VEDLVVTHGDACLPNFILDGWRFSGFIDLGRLGVADRHQDLALATWSLRFNLGGDV 237 (266)
T ss_pred cChhhcCCCHHHHHHHHHhcCCc-hhhceeecCcccCcceEecCCceEEeeecCcccchHHHHhHHHHHHHHHhccCcch
Confidence 0 001122233322221122 356799999999999999988778999985 5799999999975 31 1 2
Q ss_pred CChhhHHHHhhhCCCCCCHHHHHHHHHHH
Q 020294 270 FGGSFYNSYFEVMPKQPGFEKRRDLYMLY 298 (328)
Q Consensus 270 ~~~~f~~~Y~~~~pl~~~~~~r~~ly~l~ 298 (328)
|.+.|++.|.-.. .+ ..|+.+|++.
T Consensus 238 ~~~~fl~~Yg~~~-~d---~~rl~~yr~l 262 (266)
T COG3231 238 WDDPFLDAYGRGA-ID---PARLAYYRLL 262 (266)
T ss_pred hhHHHHHHhCcCC-CC---HHHHHHHHHH
Confidence 5678999998432 12 5789999764
No 38
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=9e-14 Score=112.78 Aligned_cols=145 Identities=26% Similarity=0.279 Sum_probs=104.0
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
++.++.|..|.+|++..+++.+++|...... ...+..|...++.|.+. +.++|+++..... .+..+++|||++|..+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~-~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARK-GLPVPKVLASGES-DGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHc-CCCCCeEEEEcCC-CCccEEEEEecCCeec
Confidence 4678899999999999988899999986532 24688999999999886 6889999987654 3678999999999754
Q ss_pred CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHH
Q 020294 135 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN 214 (328)
Q Consensus 135 ~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (328)
... .. ..+. .+ ...+.+.
T Consensus 81 ~~~--------------~~-----------------------~~~~------~~-------------------~~~~~~~ 98 (155)
T cd05120 81 DEV--------------SE-----------------------EEKE------DI-------------------AEQLAEL 98 (155)
T ss_pred ccC--------------CH-----------------------HHHH------HH-------------------HHHHHHH
Confidence 211 00 0000 00 0111111
Q ss_pred hhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh
Q 020294 215 LAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW 266 (328)
Q Consensus 215 l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~ 266 (328)
+..+.. ....+++|||++++||++++++...++||+ +.++++.+|++.+.
T Consensus 99 l~~lh~--~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~~d~~~~~ 149 (155)
T cd05120 99 LAKLHQ--LPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPAFDLAAAL 149 (155)
T ss_pred HHHHhC--CCceEEEecCCCcceEEEECCcEEEEEecccccCCChHHHHHHHH
Confidence 121111 123689999999999999886778999985 67999999999653
No 39
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=99.45 E-value=5.4e-12 Score=112.02 Aligned_cols=215 Identities=16% Similarity=0.118 Sum_probs=126.8
Q ss_pred eeeCCcccceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC-CCC
Q 020294 57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF-GSS 134 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G-~~~ 134 (328)
.++.+|..+.|+.|.+.+| +.|||+..+.. ....|......|....|--+.+++..+. ....+++|++.+ .++
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~--~~~~E~~g~~~L~~w~G~GaVrll~~d~---~~~AlLLErl~~g~~L 82 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHA--EAEHEARGEAALRWWNGRGAVRLLAADP---ERGALLLERLDPGRSL 82 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcc--cchhhhhHHhHhheeCCCCceeeecccc---ccchhhhhhccCCCch
Confidence 3466789999999999887 89999997532 2334542222333333444669998873 478999999955 444
Q ss_pred C---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294 135 R---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205 (328)
Q Consensus 135 ~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 205 (328)
. .....++..+++||...... + + .. .+ ...+|.+.+.. ........ .+.
T Consensus 83 ~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~--~--p--~~---l~----~l~~~~~~l~~-----~~~~~~~~-~~~--- 140 (253)
T PF04655_consen 83 ASLPREGDDDEATRIAAGLLRRLHRPAPEP--L--P--SG---LP----PLADWFARLFA-----RARERAGA-PPR--- 140 (253)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCCC--C--C--cc---ch----hHHHHHHHHHH-----HhHhhhcc-ccH---
Confidence 2 23578899999999876421 1 0 00 00 01223222211 11111100 111
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhhhhcCC-------C----hhh
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGF-------G----GSF 274 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~~~~~~-------~----~~f 274 (328)
..+++..+...+++.+ +.+.+++|||||++|||-...+.-..||+....|+|+||++-+.+..+ . ...
T Consensus 141 ~l~~~a~~~~~~Ll~~-~~~~~lLHGDLH~~NIL~~~~~~WlaIDPkgl~Gdp~yd~a~~l~n~~~~~~~~~~~~~i~~r 219 (253)
T PF04655_consen 141 RLVDAAAALARELLAS-PGEEVLLHGDLHHGNILAAGRRGWLAIDPKGLVGDPAYDLAPLLRNPLDELPDADDPERIRRR 219 (253)
T ss_pred HHHHHHHHHHHHHhcC-CCcceeeccccchHhhhccCCCCceEeCCcccccccccCHHHHHhCccccccccccHHHHHHH
Confidence 2233333333445554 456799999999999998664434689999999999999996643221 1 123
Q ss_pred HHHHhhhCCCCCCHHHHHHHHHHHHHHH
Q 020294 275 YNSYFEVMPKQPGFEKRRDLYMLYHYLN 302 (328)
Q Consensus 275 ~~~Y~~~~pl~~~~~~r~~ly~l~~~l~ 302 (328)
++...+...++ .+|+.-+.+...+.
T Consensus 220 ~~~la~~~gld---~~R~~~W~~~~~vl 244 (253)
T PF04655_consen 220 AALLAEAAGLD---RERILAWAFARAVL 244 (253)
T ss_pred HHHHHHHHCcC---HHHHHHHHHHHHHH
Confidence 44445555555 45666665544433
No 40
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=99.43 E-value=1.3e-12 Score=119.45 Aligned_cols=205 Identities=18% Similarity=0.229 Sum_probs=115.4
Q ss_pred CCcccceeEEEEeCC-----c-----cEEEEecCCC--------CcchHHHHHHHHHHHHhcC----------CCCcccc
Q 020294 60 GGGCINLASRYGTDA-----G-----SFFVKTNRSI--------GPSMFEGEALGLGAMYETR----------TIRAPRP 111 (328)
Q Consensus 60 ~~G~~n~~y~v~~~~-----~-----~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~----------~v~VP~~ 111 (328)
|.|..+.+|||+... + ++|+|..+.. ....+++|+.+++.+.... ...+|++
T Consensus 2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~ 81 (294)
T PF02958_consen 2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC 81 (294)
T ss_pred CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence 567788888876521 1 7999998731 1356788998888665321 1247999
Q ss_pred eeccccCCCceEEEEeeecCCCC---------C-ccHHHHHHHHHHHHhcCCCCC-----CCCCCCCCcccccccCCCCc
Q 020294 112 FKVGALPTGGSYIIMEFIEFGSS---------R-GNQSVFGKKLAEMHKAGKSSK-----GFGFDVDNTIGSTPQINKWT 176 (328)
Q Consensus 112 ~~~~~~~~~~~~~v~e~l~G~~~---------~-~~~~~lg~~La~lH~~~~~~~-----~~g~~~~~~~g~~~~~~~~~ 176 (328)
+..... .+..++|||.+..... + ..+..+.+.||++|+.+.... .+.-....... ......-.
T Consensus 82 ~~~~~~-~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (294)
T PF02958_consen 82 YYADED-PGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAASWALEEKDPELFEELSSGLFE-EPFFREEL 159 (294)
T ss_pred EEeccC-CCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhCchhhhhcccccee-ccchhhhh
Confidence 988743 3468999999964321 1 457889999999999886211 01100000000 00000000
Q ss_pred ccH-HHHHHHhhhHHHHHHHHhhCC-----ChHHHHHHHHHHHHhhhhccC-CCCCCceeccCCCCCCeeecCCC-----
Q 020294 177 SNW-IEFYAEHRLGYQLKLALDQYG-----DSTIYQRGHRLMKNLAPLFEG-VNVEPCLLHGDLWSGNISSDKNG----- 244 (328)
Q Consensus 177 ~~w-~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~-~~~~~~LiHgDl~~~Nil~~~~~----- 244 (328)
..| ..++. ..+....+...+... ...+.....++.+.+..+... .....+|||||+|.+||++..++
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~ 238 (294)
T PF02958_consen 160 EEWFEEFFE-QGLKAFIESLDDEWPEYEEYSEKLEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPI 238 (294)
T ss_pred hHHHHHHHH-HHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEccccccccc
Confidence 111 11111 111111111111100 011223333444444444422 14577999999999999997652
Q ss_pred CeEEEccc-cccCCchhhhhhhhh
Q 020294 245 EPVILDPA-CYYGHNEAEFGMSWC 267 (328)
Q Consensus 245 ~~~iID~~-~~~G~p~~DLa~~~~ 267 (328)
.+.+|||. +.+|.|..||+.+.+
T Consensus 239 ~~~liDfQ~~~~g~p~~Dl~~fl~ 262 (294)
T PF02958_consen 239 DVVLIDFQLARYGSPAIDLAYFLY 262 (294)
T ss_pred cceeeccccccCCCcHhHHHHHHH
Confidence 36899995 679999999997644
No 41
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=99.40 E-value=4e-13 Score=116.87 Aligned_cols=187 Identities=19% Similarity=0.220 Sum_probs=99.4
Q ss_pred ccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------ccHHHHHHHH
Q 020294 75 GSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKL 145 (328)
Q Consensus 75 ~~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~L 145 (328)
.+|++|++...+... .+.|..+++.+++. --.|+++..... ..+++|++|.++. .....+++.|
T Consensus 3 ~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~--g~~p~~~~~~~~-----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l 75 (211)
T PF01633_consen 3 EKYLVRIPGEGTENFIDRENENEALKLLSEA--GLGPKIIYFFEN-----GRVEEFIEGRTLSPEDFRNPEILKRIAKLL 75 (211)
T ss_dssp SEEEEEEEESCGCSHHHHHHHHHHHHHHHHT--TSSS-EEEEETT-----EEEEE--SSEE--CGGGGSHHHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccCHHHHHHHHHHHHHc--CCCCeEEEEcCC-----CcEEEEecccccChhhccChHHHHHHHHHH
Confidence 479999997653333 45688899999885 478889988642 5788999998753 2468999999
Q ss_pred HHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH-hhhHHHHHHHHhhC-CChHHHHHHHHHHHHhhhhccCCC
Q 020294 146 AEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE-HRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVN 223 (328)
Q Consensus 146 a~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 223 (328)
++||....+. .. ... .-| +.+..+... .... ........ ........+.+.+..+...+....
T Consensus 76 ~~lH~~~~~~--~~-~~~---------~~~-~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~ 140 (211)
T PF01633_consen 76 AKLHSIPISP--NS-KKP---------DLW-DRIDKYMNKKSEFL--FKRKKKKKSIDKEDLEDLQEELEELEKLLEKSN 140 (211)
T ss_dssp HHHHTHHHTT--SS-SS----------HHH-HHHHHHHHHHHTCC--CCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHhhccccc--cc-Ccc---------hHH-HHhhhhccchhhhh--hhhhhhccccccCCHHHHHHHHhhhhhhhhccC
Confidence 9999988611 00 000 000 111111000 0000 00000000 000011222333333444443324
Q ss_pred CCCceeccCCCCCCeee-cCCCCeEEEccc-cccCCchhhhhhhhh---cCC--ChhhHHHHhhhCC
Q 020294 224 VEPCLLHGDLWSGNISS-DKNGEPVILDPA-CYYGHNEAEFGMSWC---AGF--GGSFYNSYFEVMP 283 (328)
Q Consensus 224 ~~~~LiHgDl~~~Nil~-~~~~~~~iID~~-~~~G~p~~DLa~~~~---~~~--~~~f~~~Y~~~~p 283 (328)
.+.++||+|++++|||+ +.++...+|||+ +.++++.+|||...+ ... .+.|++.|.+..|
T Consensus 141 ~~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f~e~~~~~~~~~~~~~~~~~~yp 207 (211)
T PF01633_consen 141 SPLVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAFDIANFFCEWNFDYEQEEFFFKCDYSKYP 207 (211)
T ss_dssp GGEEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHHHHTTEETTHSSTSTEE-GGGS-
T ss_pred CCceEeeccCccccEEeccCCCeEEEecHHHHhhccchhhHHHHHHHHcCchhhhhhhhhhhHhhCC
Confidence 56899999999999999 556678999985 889999999997643 111 2235666666555
No 42
>COG4857 Predicted kinase [General function prediction only]
Probab=99.35 E-value=3.5e-11 Score=105.61 Aligned_cols=202 Identities=18% Similarity=0.160 Sum_probs=118.6
Q ss_pred CCCcceeeeeeeCCcccceeEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCcccceecc
Q 020294 48 GKATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKVG 115 (328)
Q Consensus 48 ~~~~~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~ 115 (328)
|++..-..++.||.|..|-+|.|....+ ..++|++-+. ....-..|...|..=.++.+--||++|.++
T Consensus 27 G~~~s~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf~D 106 (408)
T COG4857 27 GPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFFD 106 (408)
T ss_pred CCCccceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEeec
Confidence 5444455688999999999999987654 8899988531 112334577667666666677899999998
Q ss_pred ccCCCceEEEEeeec-----------CCCCCccHHHHHHHHHHHHhcCCCCC-----------CCCCCCCCcccccccCC
Q 020294 116 ALPTGGSYIIMEFIE-----------FGSSRGNQSVFGKKLAEMHKAGKSSK-----------GFGFDVDNTIGSTPQIN 173 (328)
Q Consensus 116 ~~~~~~~~~v~e~l~-----------G~~~~~~~~~lg~~La~lH~~~~~~~-----------~~g~~~~~~~g~~~~~~ 173 (328)
. ....++||++. |+..+.....+|..+++-=-...... .|- .+..+.-+ ..-
T Consensus 107 e---~mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k~kK~~vk~Ft--NpELCDIt-E~L 180 (408)
T COG4857 107 E---IMAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKADVKLFT--NPELCDIT-ENL 180 (408)
T ss_pred c---hhhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchHhHHHHHHHhC--Cchhhcch-hce
Confidence 4 58899999975 44445667888888887433332110 011 01000000 000
Q ss_pred CCcccHHHHHHH----hhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEE
Q 020294 174 KWTSNWIEFYAE----HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL 249 (328)
Q Consensus 174 ~~~~~w~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iI 249 (328)
.+.+.+-+.-.. ..+.+....+. .+.+++-...+ +++.|.. ...+|||||||+|.|++.+.+ ..+|
T Consensus 181 VFtdPyfd~d~Nr~~~~~l~~fVe~L~---~n~dlkvea~k----Lk~~F~~--~aetLiHGDLHsGSIfvte~e-tkvI 250 (408)
T COG4857 181 VFTDPYFDADRNRHTIPQLDPFVEELR---KNRDLKVEAQK----LKHKFMA--YAETLIHGDLHSGSIFVTEKE-TKVI 250 (408)
T ss_pred eecCccccccccccccccchHHHHHHh---cCcchhhhHHH----HHHHHHH--HhHHHhccccccCcEEeecCc-ceee
Confidence 000100000000 01222222221 11122222222 3333332 355899999999999997654 7899
Q ss_pred ccc-cccCCchhhhhhh
Q 020294 250 DPA-CYYGHNEAEFGMS 265 (328)
Q Consensus 250 D~~-~~~G~p~~DLa~~ 265 (328)
|++ ++||+-.+|++++
T Consensus 251 DPEFaFYGPmafDiG~~ 267 (408)
T COG4857 251 DPEFAFYGPMAFDIGML 267 (408)
T ss_pred CccccccCcchhhHHHH
Confidence 985 7899999999986
No 43
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=99.27 E-value=5e-10 Score=100.77 Aligned_cols=198 Identities=17% Similarity=0.167 Sum_probs=106.5
Q ss_pred eeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec-CCC
Q 020294 55 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE-FGS 133 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~-G~~ 133 (328)
.+.+++ |.+|.+|++.-++.+.++|....+....+..+. +. |+++..... .....++.++.. |..
T Consensus 10 ~~~~~~-g~t~~~~~~~~~g~~~~~~r~~~p~~~~~~~~~-----------~~-~~l~~~~~~-~~~~~~~~q~~~~~~~ 75 (269)
T COG0510 10 KITPLN-GLTGYAFRIEGEGTRVFLKRNFEPFLPALIFRL-----------IV-PKLLWLKRI-ANGGVLVAQYWENGRT 75 (269)
T ss_pred eeeecc-CCcceeEEeeCCCCeeeeecCCCcchHHHHHHh-----------hh-hhhhhhccc-ccCCceEEeeeccccc
Confidence 456665 789999999655557777765432211121111 11 333333221 123344444443 333
Q ss_pred CC---ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHH
Q 020294 134 SR---GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR 210 (328)
Q Consensus 134 ~~---~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 210 (328)
++ .....++..|+++|........+... + ....+|..+.. ++......... ....+...+.+
T Consensus 76 l~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~-----~------~~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~~~~~ 140 (269)
T COG0510 76 LTPEDMNLKKIAHILKKLHNSVPLLHQLPRS-----G------SSFIEPKDYLE--LLWQQNSRAYR--DNHLLRKKLKE 140 (269)
T ss_pred cCccccchHHHHHHHHHhcCccchHHHHHhh-----c------chHhhHHHHHH--HHHhhchHHhh--hhHHHHHHHHH
Confidence 32 44577888999999955422111100 0 00123333321 12211111110 01122333444
Q ss_pred HHHHhhhhccCCCCC-CceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh-cCCCh----hhHHHHhhhCC
Q 020294 211 LMKNLAPLFEGVNVE-PCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGFGG----SFYNSYFEVMP 283 (328)
Q Consensus 211 ~~~~l~~~l~~~~~~-~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~-~~~~~----~f~~~Y~~~~p 283 (328)
+...++.. ..+ .++||+|++++|++.++.+...+|||+ ++.+||++|||.+.. ..+.. ..+..|.+..+
T Consensus 141 l~~~l~~~----~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~~~~~~~~~~~~~~~~~~ 216 (269)
T COG0510 141 LRRALEEV----PKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDPAFDLAALLSEYIFNHNELEDLYSAYLEKYG 216 (269)
T ss_pred HHHHhhhc----CCCceeeecCCCCccceEEcCCCcEEEEecccCCCccHHHHHHHHHHHhccchhHHHHHHHHHHHhCC
Confidence 44444432 233 799999999999999886679999995 899999999998754 33332 36666666665
Q ss_pred CC
Q 020294 284 KQ 285 (328)
Q Consensus 284 l~ 285 (328)
..
T Consensus 217 ~~ 218 (269)
T COG0510 217 FE 218 (269)
T ss_pred ch
Confidence 54
No 44
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.25 E-value=1.1e-10 Score=100.34 Aligned_cols=134 Identities=18% Similarity=0.211 Sum_probs=89.6
Q ss_pred eCCcccceeEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 59 VGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 59 i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.|..+.+|+....+..+++|...... ...+..|.++++.+... ++++|.++..+. ...+++||
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~---~~~~lv~e 77 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVDP---DNKTIVME 77 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEEC---CCCEEEEE
Confidence 5678889999998666689999854210 13355799999999875 689999987763 46799999
Q ss_pred eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294 128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 207 (328)
Q Consensus 128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 207 (328)
|++|.++. +.+.. .. ..+
T Consensus 78 ~~~g~~l~-------~~~~~----~~--------------------------------~~~------------------- 95 (199)
T TIGR03724 78 YIEGKPLK-------DVIEE----GN--------------------------------DEL------------------- 95 (199)
T ss_pred EECCccHH-------HHHhh----cH--------------------------------HHH-------------------
Confidence 99997531 11100 00 000
Q ss_pred HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh
Q 020294 208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM 264 (328)
Q Consensus 208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~ 264 (328)
+.++...+..+ ....++|||++|+||+++ ++...+|||+ +..+++..|.+.
T Consensus 96 ~~~i~~~l~~l-----H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~~~~~~ 147 (199)
T TIGR03724 96 LREIGRLVGKL-----HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEIEDKAV 147 (199)
T ss_pred HHHHHHHHHHH-----HHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCcHHhhhc
Confidence 00111111111 124699999999999998 6668999985 568888888764
No 45
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.25 E-value=1e-10 Score=101.23 Aligned_cols=139 Identities=15% Similarity=0.129 Sum_probs=91.7
Q ss_pred eeeCCcccceeEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 57 CPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
+.++.|..+.+|+....++.+++|...+.. ...+..|.+.+..+.+. ++++|.++..+. +..+++
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~---~~~~lv 77 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVDP---ENFIIV 77 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEeC---CCCEEE
Confidence 467889999999998776789999865311 12356788899988864 689999987653 477999
Q ss_pred EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294 126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205 (328)
Q Consensus 126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 205 (328)
|||++|.++. +.+.. .. + .. ..+.
T Consensus 78 ~e~~~G~~L~-------~~~~~----~~-------------------------~-~~---~~i~---------------- 101 (211)
T PRK14879 78 MEYIEGEPLK-------DLINS----NG-------------------------M-EE---LELS---------------- 101 (211)
T ss_pred EEEeCCcCHH-------HHHHh----cc-------------------------H-HH---HHHH----------------
Confidence 9999997631 11100 00 0 00 0011
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM 264 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~ 264 (328)
..+...+..+. ...++|||++|+||+++ ++.+.+|||+ +..+++..|.+.
T Consensus 102 ---~~i~~~l~~lH-----~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~~~~~~~~ 152 (211)
T PRK14879 102 ---REIGRLVGKLH-----SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSKDLEDRAV 152 (211)
T ss_pred ---HHHHHHHHHHH-----hCCcccCCCCcccEEEE-CCCEEEEECCcccCCCcHHhhhc
Confidence 11111111111 24689999999999998 5668999985 567888888774
No 46
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=99.21 E-value=2.2e-10 Score=101.36 Aligned_cols=194 Identities=13% Similarity=0.056 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC-----CccH---HHHHHHHHHHHhcCCCCC---C
Q 020294 89 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----RGNQ---SVFGKKLAEMHKAGKSSK---G 157 (328)
Q Consensus 89 ~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~-----~~~~---~~lg~~La~lH~~~~~~~---~ 157 (328)
.+..-+++-.+|.+. |+.||+++..+. ...++++|.+--+.. +... ...++.|+.+|....+.. .
T Consensus 66 ~v~~Fvai~~lL~~~-Gv~vPqIla~Dl---d~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q~~~~ 141 (351)
T COG3178 66 DVRPFVAIAGLLAGQ-GVRVPQILAADL---DQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQKAVR 141 (351)
T ss_pred hhhHHHHHHHHHhcC-CcCccHHhhhch---hcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhhcccC
Confidence 344557777888886 899999999985 477999998765432 1333 366788999999887421 1
Q ss_pred CCCCCCCcccccccCCCCcccHHHHHH-HhhhHHHHHHHHhhC--CChHHHHHHHHHHHHhhhhccCCCCCCceeccCCC
Q 020294 158 FGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKLALDQY--GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLW 234 (328)
Q Consensus 158 ~g~~~~~~~g~~~~~~~~~~~w~~~~~-~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~ 234 (328)
.|... ..|. .+. +-.. +..+-..+-.....+ .+.+.++.++++.+.+-.-+. ..+.++||+|||
T Consensus 142 ~g~~~-----~lp~----fDr--~am~~E~sLf~dWylpr~~g~~l~~~~r~~~~aiwd~Lid~~~--~~~~vlvhRDfh 208 (351)
T COG3178 142 EGSTH-----VLPP----FDR--AAMRREASLFVDWYLPRHLGRPLTDAERQAWEAIWDGLIDSLL--AQPKVLVHRDFH 208 (351)
T ss_pred CCCCC-----cCCc----ccH--HHHHHHHHhhHHhhhHHHhCCCCCHHHHHHHHHHHHHHHHHHh--cCCceeeecccc
Confidence 12100 1111 110 0000 001111111111111 233345556666665433222 358899999999
Q ss_pred CCCeeecCC----CCeEEEcc-ccccCCchhhhhhhhh---cCCC----hhhHHHHhhhCCCCC-CHHHHHHHHHHHHH
Q 020294 235 SGNISSDKN----GEPVILDP-ACYYGHNEAEFGMSWC---AGFG----GSFYNSYFEVMPKQP-GFEKRRDLYMLYHY 300 (328)
Q Consensus 235 ~~Nil~~~~----~~~~iID~-~~~~G~p~~DLa~~~~---~~~~----~~f~~~Y~~~~pl~~-~~~~r~~ly~l~~~ 300 (328)
+-|+|+..+ ..++|||| ++.+|+..||++.+.- -.++ ...+.+|.+.++... . ...-.|++-|+.
T Consensus 209 ~~NLmw~~~~~g~~rvGvlDFQDA~iGP~aYDvasL~~DArvt~~pe~~~~~l~rY~~~r~~~g~p-~d~~~Flra~~~ 286 (351)
T COG3178 209 SRNLMWTADRAGADRVGVLDFQDALIGPIAYDVASLLRDARVTWSPERELALLDRYWAARRAAGLP-FDEAAFLRAYAW 286 (351)
T ss_pred CccceecCCccCCCCCceeehhhhhcCcchhhHHHHHhhccccCCHHHHHHHHHHHHHhhhhcCCC-cCHHHHHHHHHH
Confidence 999999876 24899998 7999999999998732 3454 357899988875421 1 234455555544
No 47
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.17 E-value=6.5e-10 Score=97.19 Aligned_cols=90 Identities=16% Similarity=0.064 Sum_probs=66.1
Q ss_pred HHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCC---Ccch---------HHHHHHHHHHHHhcCCCCcc
Q 020294 42 EWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSM---------FEGEALGLGAMYETRTIRAP 109 (328)
Q Consensus 42 ~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~---------~~~E~~~l~~L~~~~~v~VP 109 (328)
+++... ++.....++.+++|..+.||.++.+.+.+++|..++. .... +++|+..+..|.+. ++++|
T Consensus 23 ~~~~~~-l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~-GI~~~ 100 (232)
T PRK10359 23 EIFDDF-LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE-GLASL 100 (232)
T ss_pred HHHHHH-hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC-CCCcc
Confidence 444444 3446777888889999999998887679999998742 1111 57888889999764 89999
Q ss_pred cceeccccC-----CCceEEEEeeecCCC
Q 020294 110 RPFKVGALP-----TGGSYIIMEFIEFGS 133 (328)
Q Consensus 110 ~~~~~~~~~-----~~~~~~v~e~l~G~~ 133 (328)
..+...... ++..+++|||++|.+
T Consensus 101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~t 129 (232)
T PRK10359 101 NDFYLLAERKTLRYAHTYIMLIEYIEGVE 129 (232)
T ss_pred eEeeeecccccccccCCeEEEEEEECCcc
Confidence 877553321 357899999999975
No 48
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=99.12 E-value=3.4e-09 Score=93.89 Aligned_cols=220 Identities=15% Similarity=0.162 Sum_probs=132.9
Q ss_pred HHHHHHhcCCCcc--eeeeeeeCCcccceeEEEEeCC---ccEEEEecCCCCcchHH--HHHHHHHHHHhcCCCCcccce
Q 020294 40 IREWILSEGKATH--ITKICPVGGGCINLASRYGTDA---GSFFVKTNRSIGPSMFE--GEALGLGAMYETRTIRAPRPF 112 (328)
Q Consensus 40 i~~~l~~~~~~~~--i~~v~~i~~G~~n~~y~v~~~~---~~~vlK~~~~~~~~~~~--~E~~~l~~L~~~~~v~VP~~~ 112 (328)
+.++|+..-+.+. -.+.+..++|.+|..+.+...+ ....+|++.+.+.-.+. .|+...+.|+.. --.|++|
T Consensus 68 a~eLlk~Lrp~W~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~vrvyg~~te~vIdre~Ev~afk~L~a~--G~ap~Ly 145 (391)
T KOG4720|consen 68 ALELLKKLRPHWKPPEVTFKRFSDGITNKLFSCYVGENMEDHVLVRVYGHNTELVIDRENEVIAFKLLAAY--GFAPKLY 145 (391)
T ss_pred HHHHHHHhcccCCccceeeeeeccchhHHHHHhhcccccceeEEEEeccCCCceeeccHHHHHHHHHHHHc--CcChhhh
Confidence 5666766534333 3456778999999877766554 36788888764433343 455555677776 3567777
Q ss_pred eccccCCCceEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH
Q 020294 113 KVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE 185 (328)
Q Consensus 113 ~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~ 185 (328)
..- .-.+++||++|..+. ..+..+++.+|+||+.... | ..|...-|.+ ...|+..
T Consensus 146 ~tF-----~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~----g--------~~pkp~lw~k-m~~f~~l 207 (391)
T KOG4720|consen 146 GTF-----NNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVAT----G--------GNPKPPLWEK-MRKFLQL 207 (391)
T ss_pred hee-----cCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccC----C--------CCCCCcHHHH-HHHHHHh
Confidence 543 237999999999873 4578999999999999873 1 1122222321 1222211
Q ss_pred h--hhHHHH-HHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC-CeEEEcc-ccccCCchh
Q 020294 186 H--RLGYQL-KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDP-ACYYGHNEA 260 (328)
Q Consensus 186 ~--~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-~~~iID~-~~~~G~p~~ 260 (328)
. +..... ++........ +.+.+-+..+.+.+.....+.++||.||=.+||+.++.. .+-+||. .+.+....+
T Consensus 208 v~~~f~de~~kq~~~~~~~~---~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY~af 284 (391)
T KOG4720|consen 208 VPTSFEDEINKQNLFDEPSP---EDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNYQAF 284 (391)
T ss_pred cCchhhcccchhhcccCCCH---HHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccchhhe
Confidence 0 000000 0000001111 122222333444444435688999999999999998764 4689996 689999999
Q ss_pred hhhh--hhhcCCC-------------hhhHHHHhhhC
Q 020294 261 EFGM--SWCAGFG-------------GSFYNSYFEVM 282 (328)
Q Consensus 261 DLa~--~~~~~~~-------------~~f~~~Y~~~~ 282 (328)
|++= ..++|.. -+|+..|.+..
T Consensus 285 DIgNHFnE~aGv~evDYSlyp~rE~Q~qwl~~YLq~~ 321 (391)
T KOG4720|consen 285 DIGNHFNEYAGVEEVDYSLYPTREEQLQWLRDYLQAY 321 (391)
T ss_pred ehhhhHHhhcCCCccchhcCCCHHHHHHHHHHHHhhc
Confidence 9993 2344432 15788886654
No 49
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=1.1e-09 Score=91.36 Aligned_cols=154 Identities=19% Similarity=0.186 Sum_probs=97.7
Q ss_pred eeCCcccceeEEEEeCCccEEEEecCCC-----C------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 58 PVGGGCINLASRYGTDAGSFFVKTNRSI-----G------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~~~vlK~~~~~-----~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
.+..|..+.+|...--+.+.|+|.-.+. . ......|+.++..+... |+|||.++.++. ....++|
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~---~~~~I~m 78 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDP---DNGLIVM 78 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcC---CCCEEEE
Confidence 3456777777777554446778764321 1 24456799999999887 899999999985 4779999
Q ss_pred eeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHH
Q 020294 127 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 206 (328)
Q Consensus 127 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~ 206 (328)
||++|..+.. .|-. ... +.. +++
T Consensus 79 e~I~G~~lkd-------~l~~---~~~---------------------------~~~--r~v------------------ 101 (204)
T COG3642 79 EYIEGELLKD-------ALEE---ARP---------------------------DLL--REV------------------ 101 (204)
T ss_pred EEeCChhHHH-------HHHh---cch---------------------------HHH--HHH------------------
Confidence 9999974210 0000 000 000 011
Q ss_pred HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh----hh--h-c---C---CCh
Q 020294 207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM----SW--C-A---G---FGG 272 (328)
Q Consensus 207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~----~~--~-~---~---~~~ 272 (328)
-+.+.++ ....+|||||.+.|+++.+++ +.+|||. +.+.+-.-|.|+ +. . + . +-.
T Consensus 102 --G~~vg~l--------H~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~aVDl~Vleral~sth~~~e~l~~ 170 (204)
T COG3642 102 --GRLVGKL--------HKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKAVDLHVLERALESTHEKAEELFA 170 (204)
T ss_pred --HHHHHHH--------HhcCeecCCCccceEEEeCCc-EEEEECCcccccccHHhhhchHHHHHHHHHhccccHHHHHH
Confidence 1122221 134799999999999997665 8999985 456666666663 21 1 1 1 125
Q ss_pred hhHHHHhhhCC
Q 020294 273 SFYNSYFEVMP 283 (328)
Q Consensus 273 ~f~~~Y~~~~p 283 (328)
.|+++|.+...
T Consensus 171 ~f~~gY~~~~~ 181 (204)
T COG3642 171 AFLEGYREEFG 181 (204)
T ss_pred HHHHHHHHHhc
Confidence 78999977654
No 50
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.10 E-value=4.6e-09 Score=93.10 Aligned_cols=71 Identities=18% Similarity=0.123 Sum_probs=54.6
Q ss_pred CcccceeEEEEeCCccEEEEecCCC----------------CcchHHHHHHHHHHHHhcCCCCcccceeccccCC---Cc
Q 020294 61 GGCINLASRYGTDAGSFFVKTNRSI----------------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GG 121 (328)
Q Consensus 61 ~G~~n~~y~v~~~~~~~vlK~~~~~----------------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~---~~ 121 (328)
.|..|++|+|.++++++|||.+... ....+.+|.+.++.|.+. +++||+++....... ..
T Consensus 42 ~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~~~~~~~ 120 (239)
T PRK01723 42 AKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVRHGLFYR 120 (239)
T ss_pred CCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeeecCccee
Confidence 6788999999999889999988421 123456799999999876 799999998743322 24
Q ss_pred eEEEEeeecCC
Q 020294 122 SYIIMEFIEFG 132 (328)
Q Consensus 122 ~~~v~e~l~G~ 132 (328)
.++|||+++|.
T Consensus 121 ~~lV~e~l~G~ 131 (239)
T PRK01723 121 ADILIERIEGA 131 (239)
T ss_pred eeEEEEecCCC
Confidence 56999999985
No 51
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.08 E-value=6.4e-10 Score=97.85 Aligned_cols=136 Identities=21% Similarity=0.231 Sum_probs=95.5
Q ss_pred eeeCCcccceeEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCccc
Q 020294 57 CPVGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPR 110 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~v~VP~ 110 (328)
.+||-|-.+.+|.+.+++| +.++|+.+-. ++...++|+++|+.|... |++||+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~ 175 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK 175 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence 4578889999999998865 8999987521 012246899999999986 799999
Q ss_pred ceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHH
Q 020294 111 PFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGY 190 (328)
Q Consensus 111 ~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~ 190 (328)
|+..+ ++.++||+++|.++ .++-. .. .+ ..
T Consensus 176 P~~~n-----RHaVvMe~ieG~eL-----------~~~r~-~~-----------------------en---------~~- 205 (304)
T COG0478 176 PIAWN-----RHAVVMEYIEGVEL-----------YRLRL-DV-----------------------EN---------PD- 205 (304)
T ss_pred ccccc-----cceeeeehccccee-----------ecccC-cc-----------------------cC---------HH-
Confidence 99886 67999999999754 11000 00 00 00
Q ss_pred HHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-cc-ccCCchhhhh
Q 020294 191 QLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-AC-YYGHNEAEFG 263 (328)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~-~~G~p~~DLa 263 (328)
+.++.+++.+.... ..+++||||..-||++++||...+||| .+ ..++|..+.-
T Consensus 206 ---------------~il~~il~~~~~~~-----~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~e~ 260 (304)
T COG0478 206 ---------------EILDKILEEVRKAY-----RRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPISHPDAEEL 260 (304)
T ss_pred ---------------HHHHHHHHHHHHHH-----HcCccccCCchheEEEecCCCEEEEeCcccccCCCCCHHHH
Confidence 11222233333222 347999999999999999988999997 65 4788876654
No 52
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.93 E-value=1.5e-08 Score=91.12 Aligned_cols=66 Identities=23% Similarity=0.248 Sum_probs=50.0
Q ss_pred eeEEEEeCCccEEEEecCCCC-------------c-chHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEEEEe
Q 020294 66 LASRYGTDAGSFFVKTNRSIG-------------P-SMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIME 127 (328)
Q Consensus 66 ~~y~v~~~~~~~vlK~~~~~~-------------~-~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~v~e 127 (328)
.|++++.++..|+||...... + ....+|...+..|.+. ++|||+|+.++... ....++|+|
T Consensus 37 rvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCCccceeEEEEe
Confidence 367888777799999775322 0 1367899999999987 89999998876432 235899999
Q ss_pred eecCC
Q 020294 128 FIEFG 132 (328)
Q Consensus 128 ~l~G~ 132 (328)
+++|.
T Consensus 116 ~l~~~ 120 (268)
T PRK15123 116 DLAPT 120 (268)
T ss_pred eCCCC
Confidence 99985
No 53
>PRK09902 hypothetical protein; Provisional
Probab=98.91 E-value=1e-07 Score=81.96 Aligned_cols=180 Identities=12% Similarity=0.096 Sum_probs=112.2
Q ss_pred hhHHHHHHHhcCCCcceeeeeeeCC--cccceeEEEEeCCccEEEEecCC---------CCcchHHHHHHHHHHHHhcCC
Q 020294 37 DDPIREWILSEGKATHITKICPVGG--GCINLASRYGTDAGSFFVKTNRS---------IGPSMFEGEALGLGAMYETRT 105 (328)
Q Consensus 37 ~~~i~~~l~~~~~~~~i~~v~~i~~--G~~n~~y~v~~~~~~~vlK~~~~---------~~~~~~~~E~~~l~~L~~~~~ 105 (328)
.++..+|....+ .-+++... |..+.|++++.++..|+||...+ -+...+.+|...|+.|.+. +
T Consensus 7 ~~~f~~~w~~~~-----~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~-G 80 (216)
T PRK09902 7 YDEFNHWWATEG-----DWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERA-G 80 (216)
T ss_pred hhhHHHHHhCCC-----ceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHc-C
Confidence 456778876542 23444433 67789999998877999998762 2346688999999999997 7
Q ss_pred CCcccceeccccCC---CceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHH
Q 020294 106 IRAPRPFKVGALPT---GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEF 182 (328)
Q Consensus 106 v~VP~~~~~~~~~~---~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~ 182 (328)
+|||+|+..+..+. -..++|+|.++|-.. |..+-.... .. .+...
T Consensus 81 vPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~----------L~~~l~~~~------~~------------~~~~~---- 128 (216)
T PRK09902 81 VIVPKIVFGEAVKIEGEWRALLVTEDMAGFIS----------IADWYAQHA------VS------------PYSDE---- 128 (216)
T ss_pred CCCCccceeeeeccCCceEEEEEEEeCCCCcc----------HHHHHhcCC------cC------------CcchH----
Confidence 99999996653321 257899999998643 222211000 00 00000
Q ss_pred HHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCC--eEEEcccc------c
Q 020294 183 YAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE--PVILDPAC------Y 254 (328)
Q Consensus 183 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~--~~iID~~~------~ 254 (328)
. ...+ ...+.+++.++ ...+++|||+.+.||+++.++. ..+||++. .
T Consensus 129 ~-k~~i----------------l~~va~~ia~L--------H~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l~~ 183 (216)
T PRK09902 129 V-RQAM----------------LKAVALAFKKM--------HSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRR 183 (216)
T ss_pred H-HHHH----------------HHHHHHHHHHH--------HHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchhhhh
Confidence 0 0001 01122223222 2458999999999999986665 78999753 2
Q ss_pred cCCchhhhhhhh-h-cCCCh----hhHHHHh
Q 020294 255 YGHNEAEFGMSW-C-AGFGG----SFYNSYF 279 (328)
Q Consensus 255 ~G~p~~DLa~~~-~-~~~~~----~f~~~Y~ 279 (328)
.-...-||..+. - .+|++ .|+.+|.
T Consensus 184 ~~~~~~Dl~~l~r~~~~~s~~~~~~~~~~y~ 214 (216)
T PRK09902 184 DKAINHDFRQLEKYLEPIPKADWEQVKAYYY 214 (216)
T ss_pred hhhhHhHHHHHHHhccCCCHHHHHHHHHHHh
Confidence 355677888664 2 45663 4677775
No 54
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.90 E-value=8.6e-09 Score=101.99 Aligned_cols=159 Identities=16% Similarity=0.156 Sum_probs=99.8
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCC-----C------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRS-----I------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~-----~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
.+.++.|.+..||+....++..++|.... . ....+..|+++++.+... ++++|.++..+. ...++
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~---~~~~l 413 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVDP---EEKTI 413 (535)
T ss_pred cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEeC---CCCEE
Confidence 46689999999999776665555554321 1 023467899999999765 577777776653 46799
Q ss_pred EEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHH
Q 020294 125 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI 204 (328)
Q Consensus 125 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~ 204 (328)
+|||++|.++.. .+. . . ..+
T Consensus 414 v~E~~~g~~L~~-------~l~---~--~--------------------------------~~~---------------- 433 (535)
T PRK09605 414 VMEYIGGKDLKD-------VLE---G--N--------------------------------PEL---------------- 433 (535)
T ss_pred EEEecCCCcHHH-------HHH---H--H--------------------------------HHH----------------
Confidence 999999975311 110 0 0 000
Q ss_pred HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh------hcC-------C
Q 020294 205 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW------CAG-------F 270 (328)
Q Consensus 205 ~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~------~~~-------~ 270 (328)
+.++.+.+..+. ...++|||++|.|||++ ++.+.||||+ +..+++..|++..+ +.+ .
T Consensus 434 ---~~~i~~~L~~lH-----~~giiHrDlkp~NILl~-~~~~~liDFGla~~~~~~~d~a~~l~~~~~~~~~~~~~~~~~ 504 (535)
T PRK09605 434 ---VRKVGEIVAKLH-----KAGIVHGDLTTSNFIVR-DDRLYLIDFGLGKYSDLIEDKAVDLHVLKQSLESTHYDFEEL 504 (535)
T ss_pred ---HHHHHHHHHHHH-----hCCCccCCCChHHEEEE-CCcEEEEeCcccccCCchHhhhhhHHHHHHHhcCCCCCHHHH
Confidence 011111111111 24699999999999994 5568999995 56899999988632 111 1
Q ss_pred ChhhHHHHhhhCCCCCCH
Q 020294 271 GGSFYNSYFEVMPKQPGF 288 (328)
Q Consensus 271 ~~~f~~~Y~~~~pl~~~~ 288 (328)
-+.|+++|... +..+.+
T Consensus 505 ~~~fl~gY~~~-~~~~~~ 521 (535)
T PRK09605 505 WEAFLEGYRET-EGAEDV 521 (535)
T ss_pred HHHHHHhhccC-ccHHHH
Confidence 14688999765 433333
No 55
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.90 E-value=1.6e-08 Score=97.32 Aligned_cols=96 Identities=17% Similarity=0.095 Sum_probs=65.6
Q ss_pred CChhHHHHHHHhcCCCcce------eeeeeeCCcccceeEEEEeCCc-cEEEEecCCCCcch------------------
Q 020294 35 LSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSM------------------ 89 (328)
Q Consensus 35 ~~~~~i~~~l~~~~~~~~i------~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~------------------ 89 (328)
++.+++++.|.+. +|..+ .+-+|++.|..+.||+.++.+| .++||+-++.-...
T Consensus 96 ~~~~~~~~~l~~e-lg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~ 174 (437)
T TIGR01982 96 FDFKVARKVIEAA-LGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERL 174 (437)
T ss_pred CCHHHHHHHHHHH-hCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 6777888888776 33222 2236899999999999998766 89999986532112
Q ss_pred -------------------------HHHHHHHHHHHHh----cCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 90 -------------------------FEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 90 -------------------------~~~E~~~l~~L~~----~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
+..|++.+..+++ ...+.||+++.... +..+++|||++|.++
T Consensus 175 ~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~---~~~vLvmE~i~G~~L 245 (437)
T TIGR01982 175 SPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRT---SERVLTMEWIDGIPL 245 (437)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc---CCceEEEEeECCccc
Confidence 2234444444432 23578999986543 467999999999875
No 56
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.87 E-value=4.3e-08 Score=83.74 Aligned_cols=71 Identities=23% Similarity=0.260 Sum_probs=53.2
Q ss_pred eeeCCcccceeEEEEeCCc-cEEEEecCCCCc-----------------------------chHHHHHHHHHHHHhcCCC
Q 020294 57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGP-----------------------------SMFEGEALGLGAMYETRTI 106 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~-----------------------------~~~~~E~~~l~~L~~~~~v 106 (328)
.+++.|....||+....+| .+++|+.+.... ...+.|++.+..+... ++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i 81 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV 81 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 4688899999999987655 889998764210 1135688888888875 68
Q ss_pred CcccceeccccCCCceEEEEeeecCCC
Q 020294 107 RAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 107 ~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
++|.++... ..+++|||++|..
T Consensus 82 ~~p~~~~~~-----~~~lVmE~~~g~~ 103 (190)
T cd05145 82 PVPEPILLK-----KNVLVMEFIGDDG 103 (190)
T ss_pred CCceEEEec-----CCEEEEEEecCCC
Confidence 899988664 2499999999973
No 57
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.84 E-value=1.4e-08 Score=86.48 Aligned_cols=38 Identities=26% Similarity=0.461 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec--CCC
Q 020294 90 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE--FGS 133 (328)
Q Consensus 90 ~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~--G~~ 133 (328)
.++|++.|+.+.+. |++||+|+... ..++|||||+ |.+
T Consensus 55 ~~~E~~~L~~l~~~-Gv~vP~p~~~~-----~~~ivME~I~~~G~~ 94 (188)
T PF01163_consen 55 AKKEFRNLKRLYEA-GVPVPKPYDYN-----RNVIVMEYIGEDGVP 94 (188)
T ss_dssp HHHHHHHHHHCCCT-T-SS--EEEEE-----TTEEEEE--EETTEE
T ss_pred HHHHHHHHHHHHHC-CccCCcEEEEe-----CCEEEEEecCCCccc
Confidence 56899999999886 79999999886 4599999999 654
No 58
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.83 E-value=3.1e-08 Score=84.67 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294 91 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 91 ~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
++|++.|+.+.+. |+|||+|+... ..+++|||+.|..
T Consensus 74 ~kE~r~L~rl~~~-Gv~vP~pi~~~-----~~~lvME~Ig~~~ 110 (197)
T cd05146 74 EKEMHNLKRMQKA-GIPCPEVVVLK-----KHVLVMSFIGDDQ 110 (197)
T ss_pred HHHHHHHHHHHHc-CCCCCeEEEec-----CCEEEEEEcCCCC
Confidence 3899999999997 79999999874 5699999998863
No 59
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.79 E-value=5.7e-08 Score=83.08 Aligned_cols=71 Identities=20% Similarity=0.163 Sum_probs=51.6
Q ss_pred eeeCCcccceeEEEEeCCc-cEEEEecCCCC---c---------c-----------------hHHHHHHHHHHHHhcCCC
Q 020294 57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---P---------S-----------------MFEGEALGLGAMYETRTI 106 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~---------~-----------------~~~~E~~~l~~L~~~~~v 106 (328)
..+|.|....||+....+| .+++|+.+... . . ....|++.++.|... ++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GI 81 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 3578899999999987655 89999875321 0 1 123489999999875 67
Q ss_pred CcccceeccccCCCceEEEEeeecCCC
Q 020294 107 RAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 107 ~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
++|.++... ..++||||++|..
T Consensus 82 ~~p~~~~~~-----~~~iVmE~i~g~~ 103 (190)
T cd05147 82 PCPEPILLK-----SHVLVMEFIGDDG 103 (190)
T ss_pred CCCcEEEec-----CCEEEEEEeCCCC
Confidence 888877543 3499999999964
No 60
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.73 E-value=3.8e-07 Score=76.06 Aligned_cols=75 Identities=24% Similarity=0.163 Sum_probs=58.7
Q ss_pred eeeeeCCcccceeEEEEeCCccEEEEecCC-----C------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 55 KICPVGGGCINLASRYGTDAGSFFVKTNRS-----I------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~-----~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
+++.+..|....+++.......+++|--.+ + +......|++.|..+... |+++|+++..+. ....
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~---~~~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDT---YGGQ 86 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEec---CCCe
Confidence 677788889888888887777888875432 1 234567899999988876 899999999885 4789
Q ss_pred EEEeeecCCC
Q 020294 124 IIMEFIEFGS 133 (328)
Q Consensus 124 ~v~e~l~G~~ 133 (328)
+.|||++|-.
T Consensus 87 i~ME~~~g~~ 96 (229)
T KOG3087|consen 87 IYMEFIDGAS 96 (229)
T ss_pred EEEEeccchh
Confidence 9999999953
No 61
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.70 E-value=2.9e-07 Score=80.50 Aligned_cols=136 Identities=24% Similarity=0.267 Sum_probs=88.1
Q ss_pred eeCCcccceeEEEEeCCc-cEEEEecCCCC---------------------------cchHHHHHHHHHHHHhcCCCCcc
Q 020294 58 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---------------------------PSMFEGEALGLGAMYETRTIRAP 109 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------------------------~~~~~~E~~~l~~L~~~~~v~VP 109 (328)
.++.|-...||+-.+.++ .+.+|++.... ....++|+.-|..+++. |++||
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA-GVrvP 133 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA-GVRVP 133 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCC
Confidence 567888889999777655 77889885310 02246899999999997 79999
Q ss_pred cceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhH
Q 020294 110 RPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLG 189 (328)
Q Consensus 110 ~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~ 189 (328)
+|+..-. ..++||+|..... ++ |... ..+..+ +.
T Consensus 134 ~Pi~~~~-----nVLvMEfIg~~g~-----------------pA---------P~Lk-Dv~~e~---~e----------- 167 (268)
T COG1718 134 EPIAFRN-----NVLVMEFIGDDGL-----------------PA---------PRLK-DVPLEL---EE----------- 167 (268)
T ss_pred CceeecC-----CeEEEEeccCCCC-----------------CC---------CCcc-cCCcCc---hh-----------
Confidence 9998763 4999999977521 11 1000 000000 00
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-cc-ccCCch
Q 020294 190 YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-AC-YYGHNE 259 (328)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~-~~G~p~ 259 (328)
.....+.+++.+..++. ...|+||||..-|||++ ++.++|||+ .+ ...||.
T Consensus 168 --------------~~~~~~~~v~~~~~l~~----~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~ 220 (268)
T COG1718 168 --------------AEGLYEDVVEYMRRLYK----EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN 220 (268)
T ss_pred --------------HHHHHHHHHHHHHHHHH----hcCcccccchhhheEEE-CCeEEEEECccccccCCCc
Confidence 01223334444444443 35899999999999998 556999996 55 366664
No 62
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.68 E-value=3.2e-07 Score=78.79 Aligned_cols=73 Identities=21% Similarity=0.163 Sum_probs=53.4
Q ss_pred eeeeCCcccceeEEEEeCCc-cEEEEecCCCC-------------------------cchHHHHHHHHHHHHhcCCCCcc
Q 020294 56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-------------------------PSMFEGEALGLGAMYETRTIRAP 109 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~-------------------------~~~~~~E~~~l~~L~~~~~v~VP 109 (328)
.++++.|....+|+....+| .+++|+.+... ......|...+..+... ++++|
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~ 98 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP 98 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence 46688999999999987555 88999754210 01245688888888764 57899
Q ss_pred cceeccccCCCceEEEEeeecCCCC
Q 020294 110 RPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 110 ~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
.++..+ ..+++|||++|.++
T Consensus 99 ~~~~~~-----~~~lv~e~~~g~~L 118 (198)
T cd05144 99 KPIDWN-----RHAVVMEYIDGVEL 118 (198)
T ss_pred ceeecC-----CceEEEEEeCCcch
Confidence 988643 45999999999753
No 63
>smart00090 RIO RIO-like kinase.
Probab=98.68 E-value=3.2e-07 Score=81.23 Aligned_cols=90 Identities=20% Similarity=0.164 Sum_probs=62.8
Q ss_pred ChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEE--eCCc-cEEEEecCCCCc-------------------------
Q 020294 36 SDDPIREWILSEGKATHITKICPVGGGCINLASRYG--TDAG-SFFVKTNRSIGP------------------------- 87 (328)
Q Consensus 36 ~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~--~~~~-~~vlK~~~~~~~------------------------- 87 (328)
+-.++-.|++ .|....+. ++++.|....+|+.. ..+| .+++|+.+....
T Consensus 16 ~~~~~~~~~~-~~~~~~i~--~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (237)
T smart00090 16 TRLALYSLLN-RGILSAIG--GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKL 92 (237)
T ss_pred HHHHHHHHHh-cCchHHhC--CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHH
Confidence 4445556664 23333444 468899999999997 3444 888998753210
Q ss_pred --chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 88 --SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 88 --~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
..++.|++.++.|... ++.+|+++..+ ..++||||++|..+
T Consensus 93 ~~~~~~~E~~~L~~L~~~-~i~~p~~~~~~-----~~~lV~E~~~g~~L 135 (237)
T smart00090 93 VRLWAEKEFRNLQRLYEA-GVPVPKPIAWR-----RNVLVMEFIGGDGL 135 (237)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCCeeeEec-----CceEEEEEecCCcc
Confidence 1246799999999864 68899999754 35899999999754
No 64
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=98.65 E-value=7.7e-08 Score=82.68 Aligned_cols=58 Identities=22% Similarity=0.417 Sum_probs=43.5
Q ss_pred CCCceeccCCCCCCeeecCCC-----CeEEEccc-cccCCchhhhhhhhhcCCC--------hhhHHHHhhh
Q 020294 224 VEPCLLHGDLWSGNISSDKNG-----EPVILDPA-CYYGHNEAEFGMSWCAGFG--------GSFYNSYFEV 281 (328)
Q Consensus 224 ~~~~LiHgDl~~~Nil~~~~~-----~~~iID~~-~~~G~p~~DLa~~~~~~~~--------~~f~~~Y~~~ 281 (328)
...+|||||+|++|+++..++ .+.+|||+ +.+|+|.+||+.+.+.... +.+++.|.+.
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~~~~~r~~~~~~ll~~Y~~~ 189 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSLSVEIRREHFDELLKFYYET 189 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 367999999999999998543 46899985 6899999999976432221 3567777643
No 65
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.65 E-value=2.1e-07 Score=80.63 Aligned_cols=45 Identities=27% Similarity=0.252 Sum_probs=36.5
Q ss_pred cchHHHHHHHHHHHHhcCCCCcccceeccccCC---CceEEEEeeecCC
Q 020294 87 PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEFG 132 (328)
Q Consensus 87 ~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~---~~~~~v~e~l~G~ 132 (328)
.....+|...+..|.+. ++|||+|++++.... ...++|+|+++|.
T Consensus 55 ~~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~~~ 102 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALPGA 102 (206)
T ss_pred chHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCCCc
Confidence 34577899999999986 899999999886532 2568999999985
No 66
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=98.63 E-value=1.8e-07 Score=91.27 Aligned_cols=195 Identities=15% Similarity=0.155 Sum_probs=109.8
Q ss_pred eeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc--CCC---ceEEEEeee
Q 020294 55 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--PTG---GSYIIMEFI 129 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--~~~---~~~~v~e~l 129 (328)
+++.+++.++|+...+ ++++|+|+++.-.. -..=|+++.++|.+.+.-.||.++..-.. .++ .-.++.+|+
T Consensus 169 ~~r~l~~EQSNtSi~~---g~~~ilKlyRrl~~-G~nPe~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~tla~lq~fV 244 (528)
T TIGR02457 169 EVRLLSAEQSNSSLVV---GDRVVLKLYRKVEP-GINPEIEMGRYLTAAGYANIPPLLGSVERVGGDQAPHTLGLLQGYV 244 (528)
T ss_pred ceeecCCCcCceEEEE---CCEEEEEEecccCC-CCCcchHHHHHHHhCCCccCCcccEEEEEEcCCCCEEeeehHhhhh
Confidence 3566677788877776 35899999985211 11135778899988543479999876432 123 335666999
Q ss_pred cCCCC---------C-------------------------ccHHHHHHHHHHHHhcCCCCC---CCCCCCCCcccccccC
Q 020294 130 EFGSS---------R-------------------------GNQSVFGKKLAEMHKAGKSSK---GFGFDVDNTIGSTPQI 172 (328)
Q Consensus 130 ~G~~~---------~-------------------------~~~~~lg~~La~lH~~~~~~~---~~g~~~~~~~g~~~~~ 172 (328)
++..- . ..+..||+.+|+||.+....+ .|+. .|..
T Consensus 245 ~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~aLA~~~~~~aF~p--------ep~~ 316 (528)
T TIGR02457 245 QNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLALAAGGEDPAFAP--------EPIS 316 (528)
T ss_pred CCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC--------CCCC
Confidence 87531 0 015679999999999887431 2321 1111
Q ss_pred CCCcccHHHHHHHhhhHHHHHHHHhh--CCChHHH-------HHHHHHHHHhhhhccCCCCCCce---eccCCCCCCeee
Q 020294 173 NKWTSNWIEFYAEHRLGYQLKLALDQ--YGDSTIY-------QRGHRLMKNLAPLFEGVNVEPCL---LHGDLWSGNISS 240 (328)
Q Consensus 173 ~~~~~~w~~~~~~~~l~~~~~~~~~~--~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~L---iHgDl~~~Nil~ 240 (328)
......|.+-.. .++...++.+... ..+.+.. ..-+++.+++..+... ...++ ||||+|.||||+
T Consensus 317 ~~~~~~~~~~~~-~~~~~a~~~L~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~--~~~~~k~RiHGD~HLgqvL~ 393 (528)
T TIGR02457 317 TLYQRSWYQDMR-AQAERALQLLAQSRDGLPAAARALADRLLAQRKELAAHLRPLVKR--EIDGLKIRIHGDFHLGQVLV 393 (528)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhhc--CCCcceEeEecCcchhcEEE
Confidence 111123332222 1222222222111 1222222 2222333333333332 23445 999999999999
Q ss_pred cCCCCeEEEcccc----------ccCCchhhhh-hh
Q 020294 241 DKNGEPVILDPAC----------YYGHNEAEFG-MS 265 (328)
Q Consensus 241 ~~~~~~~iID~~~----------~~G~p~~DLa-~~ 265 (328)
.+++ ..||||+. .--.|.-|+| |+
T Consensus 394 t~~d-~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGML 428 (528)
T TIGR02457 394 VQDD-AVLIDFEGEPARPLAERRAKRSPLRDVAGML 428 (528)
T ss_pred eCCC-eEEEcCCCCCCCChHHhccCCChHHHHHHHH
Confidence 8776 56999742 2367999998 55
No 67
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.61 E-value=1.9e-07 Score=91.49 Aligned_cols=97 Identities=15% Similarity=0.072 Sum_probs=66.0
Q ss_pred CChhHHHHHHHhc-CCCc-ce---eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCCCc--------------------
Q 020294 35 LSDDPIREWILSE-GKAT-HI---TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIGP-------------------- 87 (328)
Q Consensus 35 ~~~~~i~~~l~~~-~~~~-~i---~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~~-------------------- 87 (328)
++.+++++.+.+. |... ++ .+.+|++.|....||+.+..+ | .++||+-++.-.
T Consensus 98 ~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~ 177 (537)
T PRK04750 98 FDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERL 177 (537)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 6777788888766 3211 11 234789999999999999865 5 799998864210
Q ss_pred -----------------------chHHHHHHHHHHHHh----cCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 88 -----------------------SMFEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 88 -----------------------~~~~~E~~~l~~L~~----~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
-.+..|++.+..+++ ...+.||++|+.-. +..+++|||++|.++
T Consensus 178 ~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s---t~~VLvmE~i~G~~l 248 (537)
T PRK04750 178 LPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC---SETVMVMERMYGIPV 248 (537)
T ss_pred CcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccC---CCceEEEeeecCccH
Confidence 013345555555542 23578999997653 478999999999864
No 68
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=98.59 E-value=6.8e-07 Score=81.87 Aligned_cols=184 Identities=20% Similarity=0.092 Sum_probs=112.8
Q ss_pred ceeeeeeeCCcccceeEEEEeCCc---------cEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 52 HITKICPVGGGCINLASRYGTDAG---------SFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~---------~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
...+++.+++|..|.+|.++.... ++.||++.... ......|..++..|+.+ ---|+++..=..
T Consensus 41 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~~~~~~~Esv~fa~lSer--~lGPkL~G~F~~---- 114 (366)
T KOG2686|consen 41 EEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVDFSQRETESVMFAILSER--GLGPKLYGFFSG---- 114 (366)
T ss_pred hhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCccHHHhhhHHHHHHHHhhc--CCCcceeeecCC----
Confidence 345788899999999999987532 58999997532 23455788888889886 356777765321
Q ss_pred eEEEEeeecCCCCC-------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHH
Q 020294 122 SYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 194 (328)
Q Consensus 122 ~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~ 194 (328)
.-+-+|++.+++. .....+|..++++|....+.+ .. . ...|. ++..++..
T Consensus 115 -GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~---ke-----------~--~~~~~------~~~~wl~~ 171 (366)
T KOG2686|consen 115 -GRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGP---KE-----------P--RSLWE------RYKKWLKG 171 (366)
T ss_pred -ccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCC---cc-----------H--HHHHH------HHHHHHhh
Confidence 3345677766552 345789999999999887311 00 0 00111 12222222
Q ss_pred HHhh---------CCC-hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC-CeEEEcc-ccccCCchhhh
Q 020294 195 ALDQ---------YGD-STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDP-ACYYGHNEAEF 262 (328)
Q Consensus 195 ~~~~---------~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-~~~iID~-~~~~G~p~~DL 262 (328)
+... ..+ .+... ....++....+.+..+.+.++||.|+..||||+.+.. ...+||| .+.+.+..+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~-l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDl 250 (366)
T KOG2686|consen 172 AKKIKPTEVSYSCGPDKLEIED-LLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDL 250 (366)
T ss_pred hhhcCCCccchhcccchhhHHH-HHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhH
Confidence 2111 000 00111 1111222333332113568999999999999998654 4799998 58999999999
Q ss_pred hhh
Q 020294 263 GMS 265 (328)
Q Consensus 263 a~~ 265 (328)
|.=
T Consensus 251 anH 253 (366)
T KOG2686|consen 251 ANH 253 (366)
T ss_pred HHH
Confidence 963
No 69
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.55 E-value=1.1e-06 Score=74.31 Aligned_cols=71 Identities=24% Similarity=0.269 Sum_probs=51.4
Q ss_pred eeeCCcccceeEEEEeCC-ccEEEEecCCCC-----cch----------------------HHHHHHHHHHHHhcCCCCc
Q 020294 57 CPVGGGCINLASRYGTDA-GSFFVKTNRSIG-----PSM----------------------FEGEALGLGAMYETRTIRA 108 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~~-----~~~----------------------~~~E~~~l~~L~~~~~v~V 108 (328)
..++.|..+.+|+....+ ..+++|+.++.. ... ...|.+.+..+... ++++
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~ 81 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPV 81 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCC
Confidence 357888999999988764 489999865321 111 13567777777765 6889
Q ss_pred ccceeccccCCCceEEEEeeecCCC
Q 020294 109 PRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 109 P~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
|+++... ..+++|||++|+.
T Consensus 82 ~~~~~~~-----~~~lv~e~~~g~~ 101 (187)
T cd05119 82 PKPIDLN-----RHVLVMEFIGGDG 101 (187)
T ss_pred CceEecC-----CCEEEEEEeCCCC
Confidence 9998764 4599999999975
No 70
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.54 E-value=1.2e-06 Score=75.54 Aligned_cols=71 Identities=14% Similarity=0.084 Sum_probs=52.5
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCCC-------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|..+++|.+..++.+++.|--.... ..++++|+++|+.|.+. ..+|+++.++ ..+++|+|
T Consensus 7 ~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~--~~vP~ll~~~-----~~~lvmey 79 (218)
T PRK12274 7 NEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL--PRTPRLLHWD-----GRHLDRSY 79 (218)
T ss_pred ceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC--CCCCEEEEEc-----CEEEEEee
Confidence 4567788899999887777788755443211 12578899999999763 5689998764 46999999
Q ss_pred ecCCC
Q 020294 129 IEFGS 133 (328)
Q Consensus 129 l~G~~ 133 (328)
++|..
T Consensus 80 I~G~~ 84 (218)
T PRK12274 80 LAGAA 84 (218)
T ss_pred ecCcc
Confidence 99975
No 71
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.52 E-value=7.8e-07 Score=86.68 Aligned_cols=96 Identities=19% Similarity=0.153 Sum_probs=68.5
Q ss_pred CChhHHHHHHHhcCCCcce------eeeeeeCCcccceeEEEEeCCc-cEEEEecCCCC---------------------
Q 020294 35 LSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--------------------- 86 (328)
Q Consensus 35 ~~~~~i~~~l~~~~~~~~i------~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~--------------------- 86 (328)
.+.+++++.+.+. +|..+ .+-+|++.+....||+-+..+| .++||+.++.-
T Consensus 104 ~~~~~~~~iie~e-LG~~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~ 182 (517)
T COG0661 104 FPFEEAERIIEEE-LGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRL 182 (517)
T ss_pred CCHHHHHHHHHHH-hCCCHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHc
Confidence 5778888888877 33222 2357788888999999999876 88999987520
Q ss_pred -c---------------------chHHHHHHHHHHHHh----cCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 87 -P---------------------SMFEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 87 -~---------------------~~~~~E~~~l~~L~~----~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
+ -.+..|++.++.+++ ...+.||+||+--+ +..+++|||++|.+.
T Consensus 183 ~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t---~~~VLtmE~i~Gi~i 253 (517)
T COG0661 183 PPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYT---TRRVLTMEWIDGIKI 253 (517)
T ss_pred CCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhcc---CCcEEEEEeeCCEec
Confidence 0 013456666665553 34688999998653 577999999999864
No 72
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.48 E-value=1.6e-07 Score=84.93 Aligned_cols=131 Identities=21% Similarity=0.238 Sum_probs=88.3
Q ss_pred eCCcccceeEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCcccce
Q 020294 59 VGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPRPF 112 (328)
Q Consensus 59 i~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~v~VP~~~ 112 (328)
||-|-.+.+|.+...+| .+++|+.+-. ++-...+|++.++.|.++ ++|||+|+
T Consensus 100 IGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~-gfpVPkpi 178 (465)
T KOG2268|consen 100 IGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER-GFPVPKPI 178 (465)
T ss_pred cccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc-CCCCCCcc
Confidence 46677889999988766 8888876410 011235799999999998 79999999
Q ss_pred eccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHH
Q 020294 113 KVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL 192 (328)
Q Consensus 113 ~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~ 192 (328)
..+ ++++|||.+.|-++ .++|....+ ..
T Consensus 179 D~~-----RH~Vvmelv~g~Pl-----------~~v~~v~d~-------------------------~~----------- 206 (465)
T KOG2268|consen 179 DHN-----RHCVVMELVDGYPL-----------RQVRHVEDP-------------------------PT----------- 206 (465)
T ss_pred ccc-----ceeeHHHhhcccce-----------eeeeecCCh-------------------------HH-----------
Confidence 876 67999999999763 333333220 00
Q ss_pred HHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcc-cc-ccCCchhh
Q 020294 193 KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-AC-YYGHNEAE 261 (328)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~-~~-~~G~p~~D 261 (328)
..+.++..+..+ . ..++|||||.--|||+++++...+||| .+ ...||-.+
T Consensus 207 --------------ly~~lm~~Iv~l-a----~~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~sh~nA~ 258 (465)
T KOG2268|consen 207 --------------LYDDLMGLIVRL-A----NHGLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTSHPNAE 258 (465)
T ss_pred --------------HHHHHHHHHHHH-H----HcCceecccchheeEEecCCCEEEeechHhhccCCCccc
Confidence 011111111111 1 248999999999999998887899995 54 45555433
No 73
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.46 E-value=3.1e-06 Score=73.23 Aligned_cols=94 Identities=14% Similarity=0.029 Sum_probs=55.4
Q ss_pred HHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCc------------chHHHHHHHHHHHHhcCCC
Q 020294 39 PIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP------------SMFEGEALGLGAMYETRTI 106 (328)
Q Consensus 39 ~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~------------~~~~~E~~~l~~L~~~~~v 106 (328)
.-.+++... ++....-++-+.+..-|.|.+++++.+.||+|.+++..+ +...++..-+..+.+. |+
T Consensus 20 ~y~~l~~~i-~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~-g~ 97 (229)
T PF06176_consen 20 KYLELGEKI-LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNE-GF 97 (229)
T ss_pred HHHHHHHHH-HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHc-Cc
Confidence 334444443 222444455566667889999999999999999976321 1123344444555554 56
Q ss_pred Ccccce-eccccC----CCceEEEEeeecCCCC
Q 020294 107 RAPRPF-KVGALP----TGGSYIIMEFIEFGSS 134 (328)
Q Consensus 107 ~VP~~~-~~~~~~----~~~~~~v~e~l~G~~~ 134 (328)
..|..+ ....-. ....+++|||++|.++
T Consensus 98 ~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l 130 (229)
T PF06176_consen 98 TEPADPYLAAEKKIFRYTSSYVLLMEYIEGVEL 130 (229)
T ss_pred cccccceeeeeeeeccceeEEEEEEEEecCeec
Confidence 555442 221111 2355789999999864
No 74
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.40 E-value=4.4e-06 Score=70.50 Aligned_cols=71 Identities=17% Similarity=0.124 Sum_probs=54.7
Q ss_pred eCCcccceeEEEEeC--CccEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 59 VGGGCINLASRYGTD--AGSFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 59 i~~G~~n~~y~v~~~--~~~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
++.|..+.+|++... +..+++|....... ..+.+|.+.++.+.+ ..+|+++..... .+..++++|+++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH---PNIVKLYGVFED-ENHLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC---CCeeeEeeeeec-CCeEEEEEecCCCC
Confidence 467888999999987 45899999976433 567889988888865 467777766554 36889999999986
Q ss_pred C
Q 020294 133 S 133 (328)
Q Consensus 133 ~ 133 (328)
+
T Consensus 77 ~ 77 (215)
T cd00180 77 S 77 (215)
T ss_pred c
Confidence 4
No 75
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.39 E-value=2.5e-06 Score=81.20 Aligned_cols=138 Identities=16% Similarity=0.190 Sum_probs=89.1
Q ss_pred eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
..-+..||.|....||.++-. .| -|.+|+-... +..-+.+|..+|.. ..+--|.++|+.-.+ ...-|+
T Consensus 143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~---~ds~~vVKLyYsFQD-~~~LYL 218 (550)
T KOG0605|consen 143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE---VDSPWVVKLYYSFQD-KEYLYL 218 (550)
T ss_pred chhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh---cCCCcEEEEEEEecC-CCeeEE
Confidence 345778999999999999864 45 5667876532 22345566666554 224457777765433 467899
Q ss_pred EEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHH
Q 020294 125 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI 204 (328)
Q Consensus 125 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~ 204 (328)
||||++|+. ++..|-+.-. ..++|..||..+.+.
T Consensus 219 iMEylPGGD-------~mTLL~~~~~------------------------L~e~~arfYiaE~vl--------------- 252 (550)
T KOG0605|consen 219 IMEYLPGGD-------MMTLLMRKDT------------------------LTEDWARFYIAETVL--------------- 252 (550)
T ss_pred EEEecCCcc-------HHHHHHhcCc------------------------CchHHHHHHHHHHHH---------------
Confidence 999999984 3333332111 124677777542110
Q ss_pred HHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccc
Q 020294 205 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY 254 (328)
Q Consensus 205 ~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~ 254 (328)
.++.+ ...+.||.|++|+|+|+|..|..-+-||+.+
T Consensus 253 ------AI~~i--------H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs 288 (550)
T KOG0605|consen 253 ------AIESI--------HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLS 288 (550)
T ss_pred ------HHHHH--------HHcCcccccCChhheeecCCCCEeecccccc
Confidence 11111 2357999999999999999998889898644
No 76
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.32 E-value=3.7e-06 Score=80.19 Aligned_cols=133 Identities=20% Similarity=0.234 Sum_probs=89.3
Q ss_pred eeeCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 57 CPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
+-+|.|..++||+.+.. +..|.+|+.... ....+..|-.+|..|.++. -+-++|..-.+ +..-|+|+||
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hP--givkLy~TFQD-~~sLYFvLe~ 155 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHP--GIVKLYFTFQD-EESLYFVLEY 155 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCC--CeEEEEEEeec-ccceEEEEEe
Confidence 34689999999998763 247888887531 2345678899999998642 24455554332 4688999999
Q ss_pred ecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHH
Q 020294 129 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 208 (328)
Q Consensus 129 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 208 (328)
.+++.+ |.-|++... |. +.|.-||+.+
T Consensus 156 A~nGdl----------l~~i~K~Gs----fd-----------------e~caR~YAAe---------------------- 182 (604)
T KOG0592|consen 156 APNGDL----------LDLIKKYGS----FD-----------------ETCARFYAAE---------------------- 182 (604)
T ss_pred cCCCcH----------HHHHHHhCc----ch-----------------HHHHHHHHHH----------------------
Confidence 999854 555666543 21 2344455431
Q ss_pred HHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 209 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 209 ~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
+++.+. ++ ...++||+|++|+|||+|+|+..-|=||+
T Consensus 183 --IldAle-yl----H~~GIIHRDlKPENILLd~dmhikITDFG 219 (604)
T KOG0592|consen 183 --ILDALE-YL----HSNGIIHRDLKPENILLDKDGHIKITDFG 219 (604)
T ss_pred --HHHHHH-HH----HhcCceeccCChhheeEcCCCcEEEeecc
Confidence 222222 11 24589999999999999999988888875
No 77
>PRK14705 glycogen branching enzyme; Provisional
Probab=98.30 E-value=2.9e-05 Score=82.28 Aligned_cols=251 Identities=16% Similarity=0.063 Sum_probs=135.1
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceecccc--------CCC-------
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--------PTG------- 120 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--------~~~------- 120 (328)
++.+++-++|+...+...+.+++||+++.-.+ -..=|+++.++|.+.+.-.||.++..-.. .++
T Consensus 149 ~r~l~~EQSNTSvi~gd~~~~~ilKlfRrl~~-G~NPdvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~~~~~~~~~~ 227 (1224)
T PRK14705 149 VKVLSGEQSNTSVIVDDGDSAAIVKFFRVLSA-GKNPEVELGAALTAAGTSEVPATLGWVTGEWDGPASNAGATARAVTG 227 (1224)
T ss_pred ccccccccCceEEEECCCCccEEEEEeeecCC-CCCccHHHHHHHhhCCCccCCCccEEEEEeecccccccCCccccCce
Confidence 34566667888776643234899999985211 11124777889988544479999876322 111
Q ss_pred ceEEEEeeecCCCC------C---------ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHH
Q 020294 121 GSYIIMEFIEFGSS------R---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE 185 (328)
Q Consensus 121 ~~~~v~e~l~G~~~------~---------~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~ 185 (328)
.-.++.+|+++..- . ..++.||+.+|+||.+.+.. ++- +... ....+ ..
T Consensus 228 tLa~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG~rtAemH~aLA~~--~~~--~~f~--------~~~~~---~~- 291 (1224)
T PRK14705 228 ELAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALGAATATVHRRLAET--LGT--HDGQ--------EQGPD---IA- 291 (1224)
T ss_pred eHHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC--CCC--cccc--------cCHHH---HH-
Confidence 23567799987642 0 23678999999999998743 111 1000 00000 00
Q ss_pred hhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC-----CeEEEccc--c-----
Q 020294 186 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EPVILDPA--C----- 253 (328)
Q Consensus 186 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~-----~~~iID~~--~----- 253 (328)
..+...++.... ...+++...-+++.+++..+.........=||||||.|.||+.++. .-.||||+ .
T Consensus 292 ~~~~~rL~~~~~-~~~~~~~~~~~~l~~~~~~l~~~~~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~ 370 (1224)
T PRK14705 292 AGVARRVRGSWA-EAGPAVGPYDHALDELLSALDGRNAGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPID 370 (1224)
T ss_pred HHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHhccCccceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChh
Confidence 011111111111 1122222333334444333322112355789999999999997432 25899974 2
Q ss_pred ---ccCCchhhhh-hhh---hc------C---------C----ChhhHHHHhhhCC-CCCCHHHHHHHHHHHHHHHH---
Q 020294 254 ---YYGHNEAEFG-MSW---CA------G---------F----GGSFYNSYFEVMP-KQPGFEKRRDLYMLYHYLNH--- 303 (328)
Q Consensus 254 ---~~G~p~~DLa-~~~---~~------~---------~----~~~f~~~Y~~~~p-l~~~~~~r~~ly~l~~~l~~--- 303 (328)
.-..|.-|+| |+. ++ . | ..+|+++|.+..+ ..+.....+.+|.|-.++-.
T Consensus 371 ERR~k~sPLRDVAGMLRSFdYAa~~~l~~~~~~~~a~~W~~~~~~aFL~gY~~~~~g~~~~~~~LL~aflLeKAvYEv~Y 450 (1224)
T PRK14705 371 ERNSPDVPLRDVTGMLRSFDYAAGAATRENEGAHVPESWVDDCAAAFLAGYSEVTPGTIDRRSPLFVALWLDKALYEVVY 450 (1224)
T ss_pred hhccCCChHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHH
Confidence 2377999998 552 11 0 1 1469999998763 33333334455554433211
Q ss_pred HHHhccCcHHHHHHHHHHHHH
Q 020294 304 YNLFGSGYRSSALSIIDDYLR 324 (328)
Q Consensus 304 ~~~~~~~y~~~~~~~~~~~~~ 324 (328)
=...-+.+...-.+.+.+++.
T Consensus 451 E~~nRP~Wv~IPL~gi~rll~ 471 (1224)
T PRK14705 451 ELRNRPDWLSIPVNASRRLLD 471 (1224)
T ss_pred HHHcCCcchHhHHHHHHHHHh
Confidence 112235665555555555553
No 78
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.24 E-value=4.1e-06 Score=74.15 Aligned_cols=99 Identities=20% Similarity=0.198 Sum_probs=68.0
Q ss_pred HHHHHHHHhhhhccCC--CCCCceeccCCCCCCeeecCCCCeEEEc---c-cc-ccCCchhhhhhhh----hcCC---Ch
Q 020294 207 RGHRLMKNLAPLFEGV--NVEPCLLHGDLWSGNISSDKNGEPVILD---P-AC-YYGHNEAEFGMSW----CAGF---GG 272 (328)
Q Consensus 207 ~~~~~~~~l~~~l~~~--~~~~~LiHgDl~~~Nil~~~~~~~~iID---~-~~-~~G~p~~DLa~~~----~~~~---~~ 272 (328)
..++..++...+|... ....+=||||||.+||.+-+ +++.++| | +. .+.|..+|++.+. +-+. ..
T Consensus 188 ~t~~f~e~~~~lf~~R~~~g~IRecHGDLhl~ni~l~d-g~~~LFDCIEFNd~fr~iDv~~D~AFl~MDLe~~gr~dla~ 266 (337)
T COG2187 188 MTEEFLERHGPLFDRRIAEGFIRECHGDLHLRNICLWD-GEPALFDCIEFNDPFRFIDVLYDLAFLAMDLEFRGRKDLAR 266 (337)
T ss_pred HHHHHHHhhhHHHHHHHhcCCceecccchhhcceeeec-CcceEEEEeecCCcchHHHHHHHHHHHHhhHhhcCChHHHH
Confidence 3344444444444432 24557899999999999954 5589999 4 34 4999999999762 3343 35
Q ss_pred hhHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 020294 273 SFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF 307 (328)
Q Consensus 273 ~f~~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~ 307 (328)
.|++.|....+= ....+.+++|.-+...++.-..
T Consensus 267 ~~ln~Yl~~tgD-~~gl~lLpfyla~rA~VRakV~ 300 (337)
T COG2187 267 RFLNTYLEETGD-WDGLELLPFYLAYRAYVRAKVT 300 (337)
T ss_pred HHHHHHHHHhCC-ccHHHHhHHHHHHHHHHHHhee
Confidence 799999877642 2336788999988887776644
No 79
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.21 E-value=1.5e-05 Score=74.90 Aligned_cols=72 Identities=13% Similarity=0.025 Sum_probs=50.4
Q ss_pred eeeeCCcccceeEEEEeC--Cc-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYGTD--AG-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
.+.+|.|....||+.... ++ .+.+|..... ....+..|+++|+.|.+. -.||.++.. +..|+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~--~iv~~l~~~-----~~~~L 95 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGI--GVVPQLLAT-----GKDGL 95 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCC--CCCcEEEEc-----CCcEE
Confidence 556889999999998653 34 3467764321 134578999999999764 235666654 35799
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
+|||++|..+
T Consensus 96 VmE~~~G~~L 105 (365)
T PRK09188 96 VRGWTEGVPL 105 (365)
T ss_pred EEEccCCCCH
Confidence 9999999754
No 80
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.20 E-value=1.6e-05 Score=75.08 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=53.1
Q ss_pred eeeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
-++.+|.|..+.||++.... ..+++|+.... ....+..|.++++.+.+ -.+++++..... .+..++||
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~ 80 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFVM 80 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCEEEEEE
Confidence 46778999999999987643 37888987531 13446678888887754 235555544333 46889999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 81 E~~~~g~L 88 (376)
T cd05598 81 DYIPGGDM 88 (376)
T ss_pred eCCCCCcH
Confidence 99999853
No 81
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.17 E-value=5.6e-06 Score=80.44 Aligned_cols=142 Identities=20% Similarity=0.190 Sum_probs=86.8
Q ss_pred cceeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294 51 THITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 51 ~~i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~ 122 (328)
...++|+.||-|....|-.+..-| . -|..|.-+.. .....++|..+| ++...--|-++|+.-.+ .+.-
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDIL---AEADn~WVVrLyySFQD-kdnL 704 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDIL---AEADNEWVVRLYYSFQD-KDNL 704 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhH---hhcCCcceEEEEEEecc-CCce
Confidence 367889999999888776665332 2 4555554431 123345666554 44444578888876443 4678
Q ss_pred EEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCCh
Q 020294 123 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 202 (328)
Q Consensus 123 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~ 202 (328)
|+||+||+|+. +...|-+|--.. ++..-||..
T Consensus 705 YFVMdYIPGGD-------mMSLLIrmgIFe------------------------E~LARFYIA----------------- 736 (1034)
T KOG0608|consen 705 YFVMDYIPGGD-------MMSLLIRMGIFE------------------------EDLARFYIA----------------- 736 (1034)
T ss_pred EEEEeccCCcc-------HHHHHHHhccCH------------------------HHHHHHHHH-----------------
Confidence 99999999984 444454432111 111222221
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccC
Q 020294 203 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYG 256 (328)
Q Consensus 203 ~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G 256 (328)
++.=.+. . -...++||+|++|+|||+|.+|...+-||..|-|
T Consensus 737 -------EltcAie----s-VHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 737 -------ELTCAIE----S-VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred -------HHHHHHH----H-HHhccceecccCccceEEccCCceeeeecccccc
Confidence 1111111 1 1357899999999999999999888999875554
No 82
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.15 E-value=1.6e-05 Score=74.77 Aligned_cols=76 Identities=18% Similarity=0.150 Sum_probs=51.0
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
-++.+|.|..+.||++... ++ .+.+|+.... ....+..|..++..+.+ ..+++.+..... ....++||
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~---~~iv~~~~~~~~-~~~~~lv~ 80 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS---LWVVKMFYSFQD-KLNLYLIM 80 (363)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCeEEEEE
Confidence 3567899999999998764 33 7888987531 12345667777776632 345555544332 45789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 81 E~~~gg~L 88 (363)
T cd05628 81 EFLPGGDM 88 (363)
T ss_pred cCCCCCcH
Confidence 99999753
No 83
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.12 E-value=2.3e-05 Score=73.52 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=51.1
Q ss_pred eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
..++.+|.|..+.||++.... + .+++|+.+.. ....+..|..++..+.+ -.+++++..... .+..++|
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~lv 79 (360)
T cd05627 4 ESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG---AWVVKMFYSFQD-KRNLYLI 79 (360)
T ss_pred eEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEE
Confidence 346778999999999988643 3 7888876521 12345667777766633 235555544332 4678999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 80 ~E~~~gg~L 88 (360)
T cd05627 80 MEFLPGGDM 88 (360)
T ss_pred EeCCCCccH
Confidence 999999753
No 84
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.09 E-value=3.1e-05 Score=71.53 Aligned_cols=76 Identities=12% Similarity=0.029 Sum_probs=49.2
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|..+.||++...+ ..+++|+.... ....+..|.+++..+.+. -.++.++..... .+..|+|||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYFVME 81 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC--CceeeeEEEEEc-CCEEEEEEc
Confidence 5678889999999997643 37899987531 123345566666655432 224555443322 457899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~~g~L 88 (324)
T cd05587 82 YVNGGDL 88 (324)
T ss_pred CCCCCcH
Confidence 9999753
No 85
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.08 E-value=3.2e-05 Score=71.54 Aligned_cols=76 Identities=11% Similarity=0.011 Sum_probs=49.7
Q ss_pred eeeeCCcccceeEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
++.+|.|..+.||++... ++ .+.+|+.... ....+..|..+++.+.++ -.+++++..... ++..+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~ 81 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQS--PFLVTLHYAFQT-EAKLH 81 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCC--CCcccEEEEEec-CCEEE
Confidence 567888999999998752 23 6788876421 123456788888877643 124444443322 46789
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
++|||++|+.+
T Consensus 82 lv~e~~~~g~L 92 (332)
T cd05614 82 LILDYVSGGEM 92 (332)
T ss_pred EEEeCCCCCcH
Confidence 99999999753
No 86
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.07 E-value=1.5e-05 Score=75.53 Aligned_cols=76 Identities=17% Similarity=0.099 Sum_probs=52.7
Q ss_pred eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
..++.+|.|..+.||++... ++ .|++|+.... ....+..|..+++.+.+ -.+++++..... .+..++|
T Consensus 4 ~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~l~~~~~~-~~~~~lv 79 (381)
T cd05626 4 VKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFV 79 (381)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC---CCeeeeEEEEec-CCEEEEE
Confidence 45778999999999998763 33 7888987531 12345677877777643 245566655433 4678999
Q ss_pred EeeecCCC
Q 020294 126 MEFIEFGS 133 (328)
Q Consensus 126 ~e~l~G~~ 133 (328)
|||++|+.
T Consensus 80 ~E~~~gg~ 87 (381)
T cd05626 80 MDYIPGGD 87 (381)
T ss_pred EecCCCCc
Confidence 99999975
No 87
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.05 E-value=3.9e-05 Score=74.84 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=63.4
Q ss_pred ChhHHHHHHHhcCCCcce------eeeeeeCCcccceeEEEEeCCc-cEEEEecCCCCc---------------------
Q 020294 36 SDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGP--------------------- 87 (328)
Q Consensus 36 ~~~~i~~~l~~~~~~~~i------~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~--------------------- 87 (328)
+.+++.+++++. +|..+ .+-+|++.-....|++-++.+| ..+||+-++.=.
T Consensus 141 ~~ee~~~i~e~E-lG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~ 219 (538)
T KOG1235|consen 141 PWEEAFKIFEEE-LGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFF 219 (538)
T ss_pred CHHHHHHHHHHH-hCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhC
Confidence 678899999887 34333 2346676666778999999888 689998875200
Q ss_pred -------------------chHHHHHHHH----HHHHhcC---CCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 88 -------------------SMFEGEALGL----GAMYETR---TIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 88 -------------------~~~~~E~~~l----~~L~~~~---~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
-.|-.|++-. +.+++.. .+.||+||+... +.-+++|||++|.++
T Consensus 220 p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s---t~RVLtME~~~G~~i 289 (538)
T KOG1235|consen 220 PDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLS---TKRVLTMEYVDGIKI 289 (538)
T ss_pred cCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcC---cceEEEEEecCCccC
Confidence 0012333322 2233322 477999999874 478999999999876
No 88
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.05 E-value=2.5e-05 Score=73.03 Aligned_cols=77 Identities=13% Similarity=0.097 Sum_probs=52.6
Q ss_pred eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
..++.+|.|..+.||++... + ..+++|+..... ...+..|+++++.+.+. .+.+++..... .+..+++||
T Consensus 77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e 152 (353)
T PLN00034 77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHP---NVVKCHDMFDH-NGEIQVLLE 152 (353)
T ss_pred hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCC---CcceeeeEecc-CCeEEEEEe
Confidence 34567899999999998764 3 378999874321 24467788888877542 34445443322 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 153 ~~~~~~L 159 (353)
T PLN00034 153 FMDGGSL 159 (353)
T ss_pred cCCCCcc
Confidence 9999754
No 89
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.05 E-value=3.8e-05 Score=71.18 Aligned_cols=75 Identities=13% Similarity=-0.026 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.++.|..+.||++...+ ..+++|+.... ....+..|.+++..+.+ -.+++++..... .+..+++||
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~lv~e 81 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS---EWLVKLLYAFQD-DEYLYLAME 81 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC---CCCccEEEEEEc-CCEEEEEEe
Confidence 5678889999999998643 37888987531 12335567777776642 234555544432 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~g~~L 88 (333)
T cd05600 82 YVPGGDF 88 (333)
T ss_pred CCCCCCH
Confidence 9999854
No 90
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.04 E-value=3.3e-05 Score=72.45 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=51.6
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|..+.||++... ++ .+++|+.... ....+..|..+++.+.+ -.+++++..... .+..++|||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~E 81 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN---PWVVKLYYSFQD-ENYLYLIME 81 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceEEEEEc-CCeEEEEEC
Confidence 567899999999998864 33 7888987521 12345678888887753 345556654433 467899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
|++|+.
T Consensus 82 ~~~~g~ 87 (364)
T cd05599 82 YLPGGD 87 (364)
T ss_pred CCCCcH
Confidence 999874
No 91
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.04 E-value=5.3e-05 Score=66.91 Aligned_cols=73 Identities=22% Similarity=0.137 Sum_probs=50.2
Q ss_pred eeCCcccceeEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 58 PVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
.++.|..+.+|+.+.. + +.+++|...... ...+..|.++++.+.+ -.+++++..... .+..+++|||++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 77 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH---PNIVRLIGVCTQ-KQPIYIVMELVQG 77 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEcC-CCCeEEEEeeccC
Confidence 5778888999998763 3 378889765321 2456778888887743 235556655443 4578999999999
Q ss_pred CCC
Q 020294 132 GSS 134 (328)
Q Consensus 132 ~~~ 134 (328)
..+
T Consensus 78 ~~L 80 (252)
T cd05084 78 GDF 80 (252)
T ss_pred CcH
Confidence 753
No 92
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.04 E-value=4.4e-05 Score=72.21 Aligned_cols=77 Identities=18% Similarity=0.106 Sum_probs=52.5
Q ss_pred eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
..++.+|.|..+.||++... ++ .+.+|..... ....+..|..+++.+.+ -.+++++..... .+..++|
T Consensus 4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h---~~iv~~~~~~~~-~~~~~lv 79 (382)
T cd05625 4 VKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN---EWVVRLYYSFQD-KDNLYFV 79 (382)
T ss_pred EEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC---CcCCeEEEEEEe-CCEEEEE
Confidence 45778999999999998763 33 6788876531 12345678877777643 235555554433 4678999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 80 ~E~~~gg~L 88 (382)
T cd05625 80 MDYIPGGDM 88 (382)
T ss_pred EeCCCCCcH
Confidence 999999753
No 93
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=98.03 E-value=0.00011 Score=62.36 Aligned_cols=169 Identities=21% Similarity=0.231 Sum_probs=92.8
Q ss_pred ccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCC-------
Q 020294 63 CINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR------- 135 (328)
Q Consensus 63 ~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~------- 135 (328)
.++..|.|+-.+|+-++|.-.+ ....+.|...-..|+=..|.-..+++..+ ...++||+..|+.+.
T Consensus 24 ~ssrllpv~~~ggsa~~~amlk--~~~~~eerrG~~ll~ww~G~Gaarvla~d-----~~alLlEra~~~rsl~~l~~~G 96 (274)
T COG3570 24 HSSRLLPVRRRGGSAIAKAMLK--KADLEEERRGADLLAWWDGIGAARVLAQD-----DNALLLERAGGERSLDVLVRDG 96 (274)
T ss_pred cccceEEEEecCchhHHHHHhh--hccchHhhccchhhhhhhcCCcchhhccC-----ccHHHHHhccccchHHHHHHhC
Confidence 3456677776665433333221 01122333333333322356677888775 458999999988652
Q ss_pred ---ccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH
Q 020294 136 ---GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 212 (328)
Q Consensus 136 ---~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 212 (328)
..-+-+.+.++++|+-..++ + +. -.+...|.+.+. .. +. + +..++-...++.
T Consensus 97 ~Dd~aTrIac~a~~rlh~Prp~p-----p-p~--------L~pL~~wf~sLf-----~~---a~-~--d~~i~v~aA~~A 151 (274)
T COG3570 97 NDDAATRIACEALARLHAPRPSP-----P-PE--------LLPLERWFESLF-----RK---AR-Q--DGSIYVEAARAA 151 (274)
T ss_pred CchHHHHHHHHHHHHhhCCCCCC-----C-cc--------cccHHHHHHHHH-----HH---Hh-h--cCCcchhHHHHH
Confidence 12356778899999874321 1 10 111122322111 00 00 0 111111111122
Q ss_pred HHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhhhh
Q 020294 213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 267 (328)
Q Consensus 213 ~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~~~ 267 (328)
..++.. +...+.+|||+|.+|||=.+..-=-+||+...+|++.||.+-+.|
T Consensus 152 ---~~LL~~-p~di~pLHGDlHH~Nild~~~rGWlvIDPkgl~Gdrg~D~ANlf~ 202 (274)
T COG3570 152 ---QTLLDT-PRDIRPLHGDLHHGNILDGDRRGWLVIDPKGLIGDRGFDYANLFC 202 (274)
T ss_pred ---HHHhcC-ccccccCcccccccccccCCcCceEEEccccccCccccchHhhhc
Confidence 223443 567889999999999996554223589999899999999996655
No 94
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.03 E-value=2.9e-05 Score=72.05 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=51.8
Q ss_pred eeeeCCcccceeEEEEe---C---C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYGT---D---A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~---~---~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
.+.+|.|..+.||++.. + . ..+.+|...... ...+..|..++..+.++ -.+.+++.......+..++
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~~~l 89 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH--LNVVNLLGACTKPNGPLMV 89 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccC--cceeeEEeEecCCCCceEE
Confidence 56689999999999863 1 1 268888875321 23466788888888543 2455566543332456789
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
+|||++|+.+
T Consensus 90 v~ey~~~g~L 99 (338)
T cd05102 90 IVEFCKYGNL 99 (338)
T ss_pred EEecCCCCcH
Confidence 9999999875
No 95
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.03 E-value=6.9e-05 Score=70.50 Aligned_cols=142 Identities=21% Similarity=0.216 Sum_probs=91.5
Q ss_pred eeCCcccceeEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCC-ceEEEEeeecCC
Q 020294 58 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFIEFG 132 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~-~~~~v~e~l~G~ 132 (328)
.+|.|....+|+-..+++ .+.||...... ...|..|++++..+.+ -.+-+++.++.. .+ ...+||||++.+
T Consensus 82 ~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H---~Nlv~LlGyC~e-~~~~~~LVYEym~nG 157 (361)
T KOG1187|consen 82 LIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRH---PNLVKLLGYCLE-GGEHRLLVYEYMPNG 157 (361)
T ss_pred ceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCC---cCcccEEEEEec-CCceEEEEEEccCCC
Confidence 467788999999999885 68888654322 2348899999888874 356677887764 34 489999999987
Q ss_pred CCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH
Q 020294 133 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 212 (328)
Q Consensus 133 ~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 212 (328)
++ --.||..... ..+|.. |+.-.+.. ++.
T Consensus 158 sL----------~d~L~~~~~~---------------------~L~W~~-----R~kIa~g~--------------A~g- 186 (361)
T KOG1187|consen 158 SL----------EDHLHGKKGE---------------------PLDWET-----RLKIALGA--------------ARG- 186 (361)
T ss_pred CH----------HHHhCCCCCC---------------------CCCHHH-----HHHHHHHH--------------HHH-
Confidence 64 1233332210 024542 33322211 111
Q ss_pred HHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCc
Q 020294 213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHN 258 (328)
Q Consensus 213 ~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p 258 (328)
+. ++-. ..++.+||+|+++.|||+|++-.+.|-||. +..++.
T Consensus 187 --L~-yLH~-~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 187 --LA-YLHE-GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred --HH-HHcc-CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 22 2222 356789999999999999988888899974 434443
No 96
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.02 E-value=4.4e-05 Score=72.07 Aligned_cols=75 Identities=17% Similarity=0.097 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|..+.||++... ++ .+++|..... ....+..|.++++.+.+ -.+++++..... .+..++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~~~~~~~~-~~~~~lv~E 81 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS---PWVVSLYYSFQD-AQYLYLIME 81 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCeeEEEEe
Confidence 567888999999998764 33 7888876421 12345668877776643 235556654433 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~gg~L 88 (377)
T cd05629 82 FLPGGDL 88 (377)
T ss_pred CCCCCcH
Confidence 9999754
No 97
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.01 E-value=4.9e-05 Score=70.07 Aligned_cols=74 Identities=11% Similarity=0.016 Sum_probs=48.0
Q ss_pred eeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++.... + .+++|+.... ....+..|.++++.+.++ -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--p~i~~~~~~~~~-~~~~~lv~E~~ 78 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH--PFLTALHCCFQT-KDRLFFVMEYV 78 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCeEEEEEeCC
Confidence 46788899999997643 3 7888987531 122344577766655443 235555544332 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 79 ~~~~L 83 (321)
T cd05591 79 NGGDL 83 (321)
T ss_pred CCCcH
Confidence 99753
No 98
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.00 E-value=7.3e-05 Score=65.84 Aligned_cols=73 Identities=21% Similarity=0.090 Sum_probs=49.9
Q ss_pred eeCCcccceeEEEEeCCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 58 PVGGGCINLASRYGTDAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
.++.|..+.+|+....++ .+++|...... ...+..|.+.++.+.+ -.+++++..... .+..+++|||++|+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~ 77 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH---PNIVKLIGVCTQ-RQPIYIVMELVPGG 77 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEec-CCccEEEEECCCCC
Confidence 467788899999876554 78899875432 2245678887777743 245555554433 45789999999997
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 78 ~L 79 (250)
T cd05085 78 DF 79 (250)
T ss_pred cH
Confidence 53
No 99
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.00 E-value=6e-05 Score=69.84 Aligned_cols=76 Identities=13% Similarity=0.026 Sum_probs=52.3
Q ss_pred eeeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
-.+.++.|....||++.... + .+++|..... ....+..|..+++.+.+ -.+.+++..... ++..+++|
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~ 97 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH---PFIVNMMCSFQD-ENRVYFLL 97 (329)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEc-CCEEEEEE
Confidence 35678889999999998643 3 6888986421 12446678888887753 235555544332 46789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 98 e~~~~~~L 105 (329)
T PTZ00263 98 EFVVGGEL 105 (329)
T ss_pred cCCCCChH
Confidence 99999754
No 100
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.00 E-value=7.3e-05 Score=75.01 Aligned_cols=174 Identities=12% Similarity=0.096 Sum_probs=99.9
Q ss_pred ceeeeeeeCCcccceeEEEEeCCc--cEEEEecC-CC--CcchHHHHHHHHHHHHhcCCCCcccceecccc---CCC---
Q 020294 52 HITKICPVGGGCINLASRYGTDAG--SFFVKTNR-SI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTG--- 120 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~-~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~~~--- 120 (328)
.++-.+.|.+|....||.+++..+ +|+||.-- .+ ....+.+|+++++.|..+. .|-.-+..... ..+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~--nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHK--NIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCC--ceeeEeccccccccCCCcee
Confidence 444445578899999999988544 89887643 32 2456789999999998752 23333321111 112
Q ss_pred ceEEEEeeecCCCCCccHHHHHHHHH-HHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhC
Q 020294 121 GSYIIMEFIEFGSSRGNQSVFGKKLA-EMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY 199 (328)
Q Consensus 121 ~~~~v~e~l~G~~~~~~~~~lg~~La-~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~ 199 (328)
...++|||++|+.+ .+.+- +++.-..
T Consensus 116 EvllLmEyC~gg~L-------vd~mn~Rlq~~lt---------------------------------------------- 142 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSL-------VDFMNTRLQTRLT---------------------------------------------- 142 (738)
T ss_pred EEEeehhhccCCcH-------HHHHHHHHhccCC----------------------------------------------
Confidence 34788999998743 22221 1111100
Q ss_pred CChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cc--c-CC-chhhhhhhhh-------
Q 020294 200 GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY--Y-GH-NEAEFGMSWC------- 267 (328)
Q Consensus 200 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~--~-G~-p~~DLa~~~~------- 267 (328)
..+....+..+.+.+..+. ..++.|||+||+.+|||+..++.-.|.||. ++ + .. -..++.++..
T Consensus 143 -e~eVLkIf~dv~~AVa~mH---~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TT 218 (738)
T KOG1989|consen 143 -EDEVLKIFYDVCEAVAAMH---YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTT 218 (738)
T ss_pred -hHHHHHHHHHHHHHHHHHh---cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCC
Confidence 0011112222333332221 357789999999999999999888999985 32 2 22 3455554421
Q ss_pred cC-CChhhHHHHhhhCCCC
Q 020294 268 AG-FGGSFYNSYFEVMPKQ 285 (328)
Q Consensus 268 ~~-~~~~f~~~Y~~~~pl~ 285 (328)
.. ..++.++-|.- .|++
T Consensus 219 p~YRsPEMIDlysg-~pI~ 236 (738)
T KOG1989|consen 219 PQYRSPEMIDLYSG-LPIG 236 (738)
T ss_pred ccccChHHHhhhcC-CCCc
Confidence 11 23678888864 2443
No 101
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=98.00 E-value=5e-05 Score=70.45 Aligned_cols=139 Identities=18% Similarity=0.158 Sum_probs=89.6
Q ss_pred ceeeeeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 52 HITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
...-+..+|.|....||.+...+ .-|.+|+-... .....+.|.++|+.+-+ --.|++|..-.. +...+
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH---PFlPTLYa~fet-~~~~c 153 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH---PFLPTLYASFET-DKYSC 153 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC---Cccchhhheeec-cceeE
Confidence 44556778999999999998765 36778876532 12345678888887743 358899876554 57889
Q ss_pred EEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChH
Q 020294 124 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 203 (328)
Q Consensus 124 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~ 203 (328)
++|||++|+. ||......++-- ..++-.-||++
T Consensus 154 l~meyCpGGd--------------L~~LrqkQp~~~---------------fse~~aRFYaA------------------ 186 (459)
T KOG0610|consen 154 LVMEYCPGGD--------------LHSLRQKQPGKR---------------FSESAARFYAA------------------ 186 (459)
T ss_pred EEEecCCCcc--------------HHHHHhhCCCCc---------------cchhhHHHHHH------------------
Confidence 9999999985 344332110000 01111223332
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 204 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 204 ~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
+++-++. +| .-.++|=+||+|+|||+.++|...+.||+
T Consensus 187 ------Evl~ALE-YL----HmlGivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 187 ------EVLLALE-YL----HMLGIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred ------HHHHHHH-HH----HhhceeeccCCcceeEEecCCcEEeeecc
Confidence 1111111 22 13478999999999999999988899975
No 102
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.99 E-value=0.00014 Score=64.83 Aligned_cols=74 Identities=20% Similarity=0.237 Sum_probs=51.7
Q ss_pred eeeeCCcccceeEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
.+.++.|..+.+|++...+ +.+++|..... ....+..|.++++.+.+ -.+.+++.... ++..+++|||++|+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~~~~~--~~~~~lv~e~~~~~ 85 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYMSKG 85 (262)
T ss_pred eeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCC---CCcceEEEEEC--CCCcEEEEEcCCCC
Confidence 4567888889999987654 47888988642 23457788888888753 23444454332 45679999999997
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 86 ~L 87 (262)
T cd05071 86 SL 87 (262)
T ss_pred cH
Confidence 64
No 103
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.99 E-value=4.6e-05 Score=70.09 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=48.2
Q ss_pred eeeCCcccceeEEEEe----CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 57 CPVGGGCINLASRYGT----DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~----~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
+.+|.|..+.||++.. .++ .+.+|+.... ....+..|.++++.+.+ -.+++++..... ++..++||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH---PFIVKLHYAFQT-EGKLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC---CCcccEEEEEEc-CCEEEEEE
Confidence 4578888999998864 223 6888876531 12334567777777743 235555554433 46889999
Q ss_pred eeecCCC
Q 020294 127 EFIEFGS 133 (328)
Q Consensus 127 e~l~G~~ 133 (328)
||++|+.
T Consensus 78 e~~~~~~ 84 (318)
T cd05582 78 DFLRGGD 84 (318)
T ss_pred cCCCCCc
Confidence 9999875
No 104
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.99 E-value=6.2e-05 Score=69.49 Aligned_cols=78 Identities=12% Similarity=0.023 Sum_probs=50.1
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|....+|++... + ..+++|..... ....+..|.++++.+.....-.+.+++..... .+..++|||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~lv~E 82 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCFVME 82 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEEEEc
Confidence 556888999999998764 3 37888987531 12345567666665543222235555544332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 83 ~~~~~~L 89 (324)
T cd05589 83 YAAGGDL 89 (324)
T ss_pred CCCCCcH
Confidence 9999753
No 105
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.99 E-value=0.00013 Score=64.67 Aligned_cols=76 Identities=20% Similarity=0.195 Sum_probs=52.4
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
.+.++.|..+.+|+....+..+++|..... ....+..|...++.+.+. .+.+++.......+..+++|||++|+++
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~lv~e~~~~~~L 87 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHS---NLVQLLGVIVEEKGGLYIVTEYMAKGSL 87 (256)
T ss_pred eeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCC---CeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence 455788888899999887778999987643 234567788888877542 3444444322223578999999998754
No 106
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.98 E-value=4.7e-05 Score=70.26 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=46.6
Q ss_pred eeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++.... + .+.+|+.... ....+..|..++..+.++ -.+++++..... .+..++||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~iv~~~~~~~~-~~~~~iv~Ey~ 78 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH--PFLTQLYCCFQT-PDRLFFVMEFV 78 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCC--CchhceeeEEEc-CCEEEEEEcCC
Confidence 46788999999998643 3 6888876521 122344566666555433 235555544332 46789999999
Q ss_pred cCCC
Q 020294 130 EFGS 133 (328)
Q Consensus 130 ~G~~ 133 (328)
+|+.
T Consensus 79 ~~g~ 82 (320)
T cd05590 79 NGGD 82 (320)
T ss_pred CCch
Confidence 9975
No 107
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.98 E-value=5.4e-05 Score=69.97 Aligned_cols=75 Identities=20% Similarity=0.151 Sum_probs=49.5
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.++.|..+.||++... ++ .+++|..... ....+..|..+++.+.+ -.+++++..... .+..++|||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS---PWIPQLQYAFQD-KDNLYLVME 81 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeEEEEEC
Confidence 566888999999998764 33 7888987531 12345667776665532 235555544332 457899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~~~~L 88 (330)
T cd05601 82 YQPGGDL 88 (330)
T ss_pred CCCCCCH
Confidence 9999753
No 108
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.97 E-value=2.2e-05 Score=73.09 Aligned_cols=75 Identities=15% Similarity=0.068 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|..+.||++... +..+++|+... .....+..|.+++..+.+ -.+++++..... ++..++|||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS---PWIVKLYYSFQD-EEHLYLVME 81 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC---CCccchhhheec-CCeEEEEEc
Confidence 567888999999999865 34788998753 122346677777777653 234445443332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~~~~L 88 (350)
T cd05573 82 YMPGGDL 88 (350)
T ss_pred CCCCCCH
Confidence 9998753
No 109
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.97 E-value=0.00013 Score=64.75 Aligned_cols=74 Identities=22% Similarity=0.220 Sum_probs=49.9
Q ss_pred eeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
.+.++.|..+.+|++...++ .+++|..... ....+..|.++++.+.+.. .+ +++.... .+..+++|||++|+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~--i~-~~~~~~~--~~~~~~v~e~~~~~ 85 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDK--LV-PLYAVVS--EEPIYIVTEFMGKG 85 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCC--ee-eEEEEEc--CCCcEEEEEcCCCC
Confidence 45688888999999876543 7888986542 2345677888888876431 22 2333322 35679999999987
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 86 ~L 87 (260)
T cd05069 86 SL 87 (260)
T ss_pred CH
Confidence 53
No 110
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.97 E-value=5.7e-05 Score=69.75 Aligned_cols=73 Identities=12% Similarity=-0.013 Sum_probs=46.6
Q ss_pred eeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++... ++ .+++|+.... . ...+..|..+++.+.+ -.+.+++..... .+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~ 77 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH---PFLTALKYSFQT-HDRLCFVMEYA 77 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCCEEEEEEc-CCEEEEEEeCC
Confidence 4678899999998764 33 7888987531 1 1234457777766643 234444433322 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 78 ~~~~L 82 (323)
T cd05571 78 NGGEL 82 (323)
T ss_pred CCCcH
Confidence 99753
No 111
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.97 E-value=6.8e-05 Score=69.50 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=50.2
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|..+.||++... +..|++|+... .....+..|..+++.+.+ -.++.++..... ++..++|||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR---RWITNLHYAFQD-ENNLYLVMD 81 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCceEEEEec-CCeEEEEEe
Confidence 567889999999998864 34788998642 112335667777766533 235555554333 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~g~~L 88 (331)
T cd05597 82 YYVGGDL 88 (331)
T ss_pred cCCCCcH
Confidence 9999754
No 112
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.96 E-value=6.4e-05 Score=69.65 Aligned_cols=73 Identities=12% Similarity=0.016 Sum_probs=46.8
Q ss_pred eeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++... ++ .+++|+.... ....+..|..+++.+.+. .+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---~iv~~~~~~~~-~~~~~lv~Ey~ 77 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHP---FLTSLKYSFQT-KDRLCFVMEYV 77 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC---CCcceEEEEEc-CCEEEEEEeCC
Confidence 4678889999998764 33 7888987531 122345677777666431 24444433322 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 78 ~~g~L 82 (328)
T cd05593 78 NGGEL 82 (328)
T ss_pred CCCCH
Confidence 99753
No 113
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.96 E-value=5e-05 Score=70.11 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=48.6
Q ss_pred eeeeCCcccceeEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
++.+|.|..+.+|++... .+ .+++|+.... ....+..|..+++.+.+. .+.+++..... ++..+
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~iv~~~~~~~~-~~~~~ 76 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHP---FIVDLIYAFQT-GGKLY 76 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCC---chhceeeEEec-CCeEE
Confidence 356888999999998752 22 6888876421 123355788888877542 34444443332 46789
Q ss_pred EEEeeecCCC
Q 020294 124 IIMEFIEFGS 133 (328)
Q Consensus 124 ~v~e~l~G~~ 133 (328)
++|||++|+.
T Consensus 77 lv~e~~~~~~ 86 (323)
T cd05584 77 LILEYLSGGE 86 (323)
T ss_pred EEEeCCCCch
Confidence 9999999875
No 114
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.95 E-value=0.00018 Score=66.46 Aligned_cols=72 Identities=13% Similarity=-0.015 Sum_probs=45.5
Q ss_pred eeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++... ++ .+.+|+.... . ...+..|.++++.+.+ -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h---p~i~~~~~~~~~-~~~~~lv~E~~ 77 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH---PFLTALKYSFQT-HDRLCFVMEYA 77 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCCceEEEEEc-CCEEEEEEeCC
Confidence 4678899999998753 33 7888887531 1 1223456666655533 234555544332 46789999999
Q ss_pred cCCC
Q 020294 130 EFGS 133 (328)
Q Consensus 130 ~G~~ 133 (328)
+|+.
T Consensus 78 ~~~~ 81 (325)
T cd05594 78 NGGE 81 (325)
T ss_pred CCCc
Confidence 9975
No 115
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.94 E-value=5.9e-05 Score=69.67 Aligned_cols=73 Identities=14% Similarity=-0.001 Sum_probs=47.3
Q ss_pred eeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++... ++ .+++|..... ....+..|.++++.+.+ -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~E~~ 77 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCFVMEYA 77 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCEEEEEEeCC
Confidence 4678889999998764 33 7888987531 11234467777776643 134444443322 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 78 ~~~~L 82 (323)
T cd05595 78 NGGEL 82 (323)
T ss_pred CCCcH
Confidence 99753
No 116
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.94 E-value=7.5e-05 Score=69.19 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=49.6
Q ss_pred eeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++.... + .+++|+.... ....+..|..+++.+.++ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~h--p~Iv~~~~~~~~-~~~~~lv~e~~ 78 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNH--PFLVGLHSCFQT-ESRLFFVIEFV 78 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CCCCceEEEEEc-CCEEEEEEeCC
Confidence 46788899999998643 3 7888987531 123456777777777543 235555554332 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 79 ~~g~L 83 (329)
T cd05588 79 SGGDL 83 (329)
T ss_pred CCCCH
Confidence 99753
No 117
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.94 E-value=9.6e-05 Score=66.93 Aligned_cols=73 Identities=12% Similarity=0.070 Sum_probs=49.7
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
-++.++.|..+.||+.... + ..+++|..... ....+..|.++++.+.+ -.+.+++..... ++..+++|||
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~e~ 84 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH---ANIVTLHDIIHT-ERCLTLVFEY 84 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC---CCEeeEEEEEcC-CCeEEEEEeC
Confidence 3567889999999998764 2 37888876521 12345678888887753 235555554433 4578999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
++|
T Consensus 85 ~~~ 87 (288)
T cd07871 85 LDS 87 (288)
T ss_pred CCc
Confidence 986
No 118
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.94 E-value=6.3e-05 Score=68.32 Aligned_cols=75 Identities=17% Similarity=0.083 Sum_probs=50.4
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.++.|..+.+|++... +..+++|..... ....+..|..+++.+.+ -.+.+++..... .+..+++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e 81 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH---PFIIRLFWTEHD-QRFLYMLME 81 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC---CcHhhhHhhhcc-CCeEEEEEe
Confidence 567888999999999865 337888986421 12346678877777753 234445444332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~~~~L 88 (291)
T cd05612 82 YVPGGEL 88 (291)
T ss_pred CCCCCCH
Confidence 9999753
No 119
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.93 E-value=8.7e-05 Score=70.02 Aligned_cols=77 Identities=13% Similarity=0.049 Sum_probs=51.1
Q ss_pred eeeeeeCCcccceeEEEEeCC--ccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 54 TKICPVGGGCINLASRYGTDA--GSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.-++.+|.|..+.+|++.... ..+++|.... .....+..|..+++.+.+ -.+++++..... +...++|
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h---~~iv~~~~~~~~-~~~~~lv 121 (370)
T cd05596 46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS---EWIVQLHYAFQD-DKYLYMV 121 (370)
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCEEEEE
Confidence 446678889999999987643 3788898642 112335667877777643 234445443332 4578999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 122 ~Ey~~gg~L 130 (370)
T cd05596 122 MEYMPGGDL 130 (370)
T ss_pred EcCCCCCcH
Confidence 999999754
No 120
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.93 E-value=0.00018 Score=63.70 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=53.9
Q ss_pred eeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 54 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
.-++.++.|..+.+|+++..++ .+++|..... ....+..|++.++.+.+. .+.+++..... .+..+++|||++
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~iv~e~~~ 82 (256)
T cd05114 7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHP---KLVQLYGVCTQ-QKPLYIVTEFME 82 (256)
T ss_pred EEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCC---CceeEEEEEcc-CCCEEEEEEcCC
Confidence 3356788999999999887655 7888876532 234567788888888542 34445544332 457899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 83 ~~~L 86 (256)
T cd05114 83 NGCL 86 (256)
T ss_pred CCcH
Confidence 8754
No 121
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.93 E-value=9.9e-05 Score=69.77 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=52.2
Q ss_pred eeeeCCcccceeEEEEe------CCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYGT------DAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~------~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
.+.+|.|..+.||+.+. +.+ .+.+|+.... ....+..|.++++.+.++ -.+.+++..... .+..++
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~H--pnIv~l~~~~~~-~~~~~l 116 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--INIVNLLGACTV-GGPTLV 116 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCC--cceeeeeeeecc-CCccee
Confidence 56788999999999863 122 6788876532 123466799988888543 245556655433 467899
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
+|||++|+++
T Consensus 117 v~E~~~~g~L 126 (375)
T cd05104 117 ITEYCCYGDL 126 (375)
T ss_pred eehhccCCcH
Confidence 9999999865
No 122
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.93 E-value=7.3e-05 Score=69.09 Aligned_cols=74 Identities=22% Similarity=0.321 Sum_probs=53.3
Q ss_pred ceeeeee-eCCcccceeEEEEeCCc-cEEEEecCC------------------------CCc-----chHHHHHHHHHHH
Q 020294 52 HITKICP-VGGGCINLASRYGTDAG-SFFVKTNRS------------------------IGP-----SMFEGEALGLGAM 100 (328)
Q Consensus 52 ~i~~v~~-i~~G~~n~~y~v~~~~~-~~vlK~~~~------------------------~~~-----~~~~~E~~~l~~L 100 (328)
.+..+.. |+.|-..-||-++..+| .|.+||+.- ..+ ...++|.+-|..|
T Consensus 144 ~i~~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl 223 (520)
T KOG2270|consen 144 VIVEINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRL 223 (520)
T ss_pred eeeecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHH
Confidence 3444333 34566677999988777 788898731 011 2246799999999
Q ss_pred HhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 101 YETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 101 ~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
++. |+|+|+|+... .+++||+||.+
T Consensus 224 ~~a-GIP~PePIlLk-----~hVLVM~FlGr 248 (520)
T KOG2270|consen 224 NNA-GIPCPEPILLK-----NHVLVMEFLGR 248 (520)
T ss_pred Hhc-CCCCCCceeee-----cceEeeeeccC
Confidence 987 79999999886 46999999874
No 123
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.93 E-value=0.00015 Score=68.55 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=50.9
Q ss_pred ceeeeeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 52 HITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
...-++.+|.|..+.+|++.... ..+++|+.... ....+..|..+++.+.+ -.+++++..... .+..+
T Consensus 44 ~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~ 119 (371)
T cd05622 44 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQD-DRYLY 119 (371)
T ss_pred hcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEc-CCEEE
Confidence 33446778999999999998753 37888886421 12335567776666543 234445544332 46789
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
++|||++|+.+
T Consensus 120 lv~Ey~~gg~L 130 (371)
T cd05622 120 MVMEYMPGGDL 130 (371)
T ss_pred EEEcCCCCCcH
Confidence 99999999754
No 124
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.92 E-value=0.00016 Score=68.29 Aligned_cols=78 Identities=13% Similarity=0.066 Sum_probs=50.3
Q ss_pred eeeeeeeCCcccceeEEEEeCC--ccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 53 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
-.-++.+|.|..+.||++.... ..+++|+... .....+..|..+++.+.+ -.+.+++..... ++..++
T Consensus 45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~l 120 (370)
T cd05621 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFCAFQD-DKYLYM 120 (370)
T ss_pred CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEE
Confidence 3445678999999999988643 3688887642 112335567777766543 234444443322 467899
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
||||++|+.+
T Consensus 121 v~Ey~~gg~L 130 (370)
T cd05621 121 VMEYMPGGDL 130 (370)
T ss_pred EEcCCCCCcH
Confidence 9999999854
No 125
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.92 E-value=0.0001 Score=68.05 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=46.6
Q ss_pred eeeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|..+.||++.... + .+.+|+.... .......|..++..+..+ -.++.++..... .+..++|||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP--PFLTQLHSCFQT-MDRLYFVME 81 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CeEeeEEEEEec-CCEEEEEEc
Confidence 5568889999999987643 3 7888986531 112233455555544322 224444443332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~~g~L 88 (323)
T cd05616 82 YVNGGDL 88 (323)
T ss_pred CCCCCCH
Confidence 9998754
No 126
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.92 E-value=0.00018 Score=63.78 Aligned_cols=74 Identities=23% Similarity=0.235 Sum_probs=52.5
Q ss_pred eeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
++.++.|..+.+|++...++ .+++|..... ....+..|..+++.+.+. .+++++.... .+..+++||+++|+
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~--~~~~~~v~e~~~~~ 85 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHP---RLVRLYAVVT--QEPIYIITEYMENG 85 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCc---CeeeEEEEEc--cCCcEEEEEcCCCC
Confidence 56788899999999987554 8889977642 235677888888888542 3444444322 35689999999987
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 86 ~L 87 (260)
T cd05067 86 SL 87 (260)
T ss_pred CH
Confidence 54
No 127
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.92 E-value=0.00019 Score=63.66 Aligned_cols=79 Identities=22% Similarity=0.163 Sum_probs=53.8
Q ss_pred ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
...-++.++.|..+.+|+....++ .+++|..... ....+..|..+++.+.+. .+.+++..... .+..+++||+
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~ 82 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD---KLVRLYAVVTK-EEPIYIITEY 82 (261)
T ss_pred HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCC---CeeeEEEEEcC-CCCcEEEEec
Confidence 344567789999999999876544 7888876532 234567788888877542 34444444332 4578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+++
T Consensus 83 ~~~~~L 88 (261)
T cd05072 83 MAKGSL 88 (261)
T ss_pred CCCCcH
Confidence 998754
No 128
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.92 E-value=0.00014 Score=64.22 Aligned_cols=74 Identities=18% Similarity=0.064 Sum_probs=52.5
Q ss_pred eeeeCCcccceeEEEEeCCc--cEEEEecCCCCcc-----hHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDAG--SFFVKTNRSIGPS-----MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~~~~-----~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.+|.|....||++..... .|++|+....... ....|...++.+.+ -.+++++..... ....+++|++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~v~~~ 79 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH---PNIVQILDVFQD-DNYLYIVMEY 79 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB---TTBCHEEEEEEE-SSEEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc---cccccccccccc-cccccccccc
Confidence 56788999999999998654 7999998754311 12347888888843 235566655443 4678999999
Q ss_pred ecCCC
Q 020294 129 IEFGS 133 (328)
Q Consensus 129 l~G~~ 133 (328)
++|+.
T Consensus 80 ~~~~~ 84 (260)
T PF00069_consen 80 CPGGS 84 (260)
T ss_dssp ETTEB
T ss_pred ccccc
Confidence 99974
No 129
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.91 E-value=0.00022 Score=63.14 Aligned_cols=75 Identities=20% Similarity=0.155 Sum_probs=53.0
Q ss_pred eeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
.+.++.|..+.+|+....++ .+++|..... ....+..|...++.+.+ -.+++++..... ....+++||+++|+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~~~ 86 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH---DKLVQLYAVCSE-EEPIYIVTEYMSKG 86 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCC---CCEeeeeeeeec-CCceEEEEeccCCC
Confidence 45678888899999876543 7888887642 23557788888887754 345556554432 46789999999997
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 87 ~L 88 (261)
T cd05034 87 SL 88 (261)
T ss_pred CH
Confidence 54
No 130
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=97.90 E-value=5.6e-05 Score=69.10 Aligned_cols=136 Identities=15% Similarity=0.197 Sum_probs=89.5
Q ss_pred eeeeeeCCcccceeEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.-++.+|-|....||.|.-.+ + -|.+|.-.. .......+|..+|..+.+ ++.|.-.+..-. .+.-|+|
T Consensus 28 ~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h--PFiv~l~ysFQt--~~kLylV 103 (357)
T KOG0598|consen 28 EILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH--PFIVKLIYSFQT--EEKLYLV 103 (357)
T ss_pred eeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC--CcEeeeEEeccc--CCeEEEE
Confidence 345667899999999998643 3 566676542 124557789999988654 677877776543 4688999
Q ss_pred EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294 126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205 (328)
Q Consensus 126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 205 (328)
++|+.|+.+ ..|-.... .|. .+-..||.
T Consensus 104 ld~~~GGeL------------f~hL~~eg--~F~-----------------E~~arfYl--------------------- 131 (357)
T KOG0598|consen 104 LDYLNGGEL------------FYHLQREG--RFS-----------------EDRARFYL--------------------- 131 (357)
T ss_pred EeccCCccH------------HHHHHhcC--Ccc-----------------hhHHHHHH---------------------
Confidence 999999865 34443321 011 11122332
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC 253 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~ 253 (328)
.++..++..+ ....++|+|++|+|||+|.+|-..+-|+..
T Consensus 132 ---aEi~lAL~~L-----H~~gIiyRDlKPENILLd~~GHi~LtDFgL 171 (357)
T KOG0598|consen 132 ---AEIVLALGYL-----HSKGIIYRDLKPENILLDEQGHIKLTDFGL 171 (357)
T ss_pred ---HHHHHHHHHH-----HhCCeeeccCCHHHeeecCCCcEEEecccc
Confidence 1222223322 245899999999999999999889999753
No 131
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.90 E-value=0.00021 Score=65.51 Aligned_cols=74 Identities=14% Similarity=0.019 Sum_probs=52.2
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.++.|..+.+|++...+ ..+++|...... ...+..|.+.++.+.+ -.+++++..... ....+++||
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e 81 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH---PFLPTLYASFQT-ETYLCLVMD 81 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC---CCchhheeeeec-CCEEEEEEE
Confidence 4567888889999998743 488999876421 2345678887777753 246666655433 467899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
|++|+.
T Consensus 82 ~~~~~~ 87 (316)
T cd05574 82 YCPGGE 87 (316)
T ss_pred ecCCCC
Confidence 999985
No 132
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.90 E-value=0.00027 Score=62.18 Aligned_cols=75 Identities=19% Similarity=0.082 Sum_probs=53.0
Q ss_pred eeeeCCcccceeEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 56 ICPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.+.++.|..+.+|++...+ ..+++|...... ...+..|.+.++.+.+ -.+.+++..... .+..+++
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~i 79 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH---PNIVKLLGVCTE-EEPLMIV 79 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC---CchheEEEEEcC-CCeeEEE
Confidence 3567888999999988754 468889886432 3457788888888833 245556654433 4688999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
||+++|+.+
T Consensus 80 ~e~~~~~~l 88 (258)
T smart00219 80 MEYMEGGDL 88 (258)
T ss_pred EeccCCCCH
Confidence 999999753
No 133
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.89 E-value=0.00012 Score=67.50 Aligned_cols=74 Identities=18% Similarity=0.113 Sum_probs=46.8
Q ss_pred eeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++... ++ .+++|..... .......|..++..+..+ -.+++++..... .+..++||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E~~ 78 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN--PFLTHLYCTFQT-KEHLFFVMEFL 78 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CCccCeeEEEEe-CCEEEEEECCC
Confidence 4778889999999864 33 6888886531 122344566555544332 345555544333 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 79 ~~g~L 83 (316)
T cd05620 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 98753
No 134
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.89 E-value=0.00012 Score=67.49 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=45.7
Q ss_pred eeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++...+ + .+++|..... .......|..++..+.++ -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~i~~~~~~~~~-~~~~~lv~e~~ 78 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEH--PFLTHLFCTFQT-KEHLFFVMEYL 78 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence 47889999999998643 3 6888876531 112233455555444332 235555544332 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 79 ~gg~L 83 (316)
T cd05592 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 99753
No 135
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.89 E-value=8e-05 Score=69.47 Aligned_cols=76 Identities=13% Similarity=0.006 Sum_probs=50.9
Q ss_pred eeeeeCCcccceeEEEEeC-Cc--cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 55 KICPVGGGCINLASRYGTD-AG--SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~--~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
-++.+|.|..+.||++... .+ .+++|.... .....+..|..+++.+.+ -.+.+++..... .+..+++
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~Iv~~~~~~~~-~~~~~lv 109 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH---PFCVNLYGSFKD-ESYLYLV 109 (340)
T ss_pred EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCCcceEEEEEe-CCEEEEE
Confidence 3567899999999998743 22 688887642 112345678888887753 235555554433 4678999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 110 ~Ey~~~g~L 118 (340)
T PTZ00426 110 LEFVIGGEF 118 (340)
T ss_pred EeCCCCCcH
Confidence 999999753
No 136
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.89 E-value=0.00011 Score=68.05 Aligned_cols=78 Identities=17% Similarity=0.061 Sum_probs=53.1
Q ss_pred eeeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 53 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
..-++.+|.|..+.||++.... + .+++|+.... . ...+..|.+.++.+.+ -.+.+++..... ++..+++|
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~ 82 (331)
T cd06649 7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICM 82 (331)
T ss_pred ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEEEEe
Confidence 3446778999999999998753 4 6777776532 1 2446778888887753 235555544332 46789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 83 e~~~~~~L 90 (331)
T cd06649 83 EHMDGGSL 90 (331)
T ss_pred ecCCCCcH
Confidence 99999754
No 137
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.89 E-value=0.00025 Score=62.95 Aligned_cols=78 Identities=22% Similarity=0.224 Sum_probs=53.1
Q ss_pred eeeeeeeCCcccceeEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 53 ITKICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
..-.+.++.|..+.+|+....+ +.+++|..... ....+..|...++.+.+ -.+++++..... .+..+++||++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 83 (261)
T cd05068 8 IQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH---PKLIQLYAVCTL-EEPIYIVTELM 83 (261)
T ss_pred eeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCC---CCccceeEEEec-CCCeeeeeecc
Confidence 3445778888889999977544 37888887642 23456778888887754 235555554332 45789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 84 ~~~~L 88 (261)
T cd05068 84 KYGSL 88 (261)
T ss_pred cCCcH
Confidence 88753
No 138
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.88 E-value=0.00033 Score=63.42 Aligned_cols=74 Identities=16% Similarity=0.107 Sum_probs=50.2
Q ss_pred eeeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
++.++.|....+|++.... + .+++|...... ...+..|...++.+.+ -.+++++..... ++..+++|||++
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 92 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH---PYIVKLLGAFYW-DGKLWIMIEFCP 92 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CcEeeeEEEEEe-CCeEEEEEecCC
Confidence 4557888889999998753 3 78888876432 2335567777776653 235555554332 568899999999
Q ss_pred CCC
Q 020294 131 FGS 133 (328)
Q Consensus 131 G~~ 133 (328)
|+.
T Consensus 93 ~~~ 95 (292)
T cd06644 93 GGA 95 (292)
T ss_pred CCc
Confidence 985
No 139
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.87 E-value=0.00029 Score=73.20 Aligned_cols=75 Identities=16% Similarity=0.040 Sum_probs=51.8
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|..+.||+..... ..+++|..+.. . ...+..|+++++.+.+ -.+++++..... .+..+++||
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H---PNIVkl~~v~~d-~~~lyLVME 82 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH---PGIVPVYSICSD-GDPVYYTMP 82 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC---cCcCeEEEEEee-CCEEEEEEE
Confidence 4568889999999987642 37889987532 1 2346678888877754 235555554433 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+++
T Consensus 83 Y~eGGSL 89 (932)
T PRK13184 83 YIEGYTL 89 (932)
T ss_pred cCCCCCH
Confidence 9999854
No 140
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.87 E-value=0.00012 Score=67.53 Aligned_cols=76 Identities=12% Similarity=0.047 Sum_probs=48.6
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
...+|.|..+.||++... ++ .+++|+.... ....+..|..++..+.+. -.++.++..... .+..++|||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP--PFLTQLHSCFQT-VDRLYFVME 81 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CchhheeeEEec-CCEEEEEEc
Confidence 456888999999998754 34 7888986531 122344566666555432 235555543322 457899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 y~~~g~L 88 (323)
T cd05615 82 YVNGGDL 88 (323)
T ss_pred CCCCCcH
Confidence 9999753
No 141
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.86 E-value=0.0002 Score=63.59 Aligned_cols=74 Identities=22% Similarity=0.213 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
++.++.|..+.+|++...++ .+++|..... ....+..|..+++.+.+. .+.+++.... ....+++|||++|+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~--~~~~~lv~e~~~~~ 85 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHD---KLVQLYAVVS--EEPIYIVTEYMSKG 85 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCC---ceEEEEeEEC--CCCcEEEEEecCCC
Confidence 45688888899999986554 7888877642 245677899888888542 2333333322 35679999999987
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 86 ~L 87 (260)
T cd05070 86 SL 87 (260)
T ss_pred cH
Confidence 53
No 142
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.86 E-value=0.00037 Score=63.52 Aligned_cols=75 Identities=19% Similarity=0.068 Sum_probs=49.7
Q ss_pred eeeeCCcccceeEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCccccee
Q 020294 56 ICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFK 113 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-----------------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~ 113 (328)
.+.+|.|....||++...+ + .+.+|...... ...+..|++.++.+.+ -.+.+++.
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~ 86 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD---PNIIRLLG 86 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC---CCeeEEEE
Confidence 4568889999999986422 1 47888875421 2346678888777743 23455555
Q ss_pred ccccCCCceEEEEeeecCCCC
Q 020294 114 VGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 114 ~~~~~~~~~~~v~e~l~G~~~ 134 (328)
.... .+..+++|||++|+.+
T Consensus 87 ~~~~-~~~~~lv~e~~~~~~L 106 (304)
T cd05096 87 VCVD-EDPLCMITEYMENGDL 106 (304)
T ss_pred EEec-CCceEEEEecCCCCcH
Confidence 4332 4578999999999753
No 143
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.86 E-value=0.00015 Score=73.80 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=50.4
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.++.|....||+.... ...+.+|+..... ...+..|...++.+.+. .+.+++..... .+..++|||
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp---~Iv~~~~~~~~-~~~~~lVmE 84 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSP---FIVHLYYSLQS-ANNVYLVME 84 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCC---CcCeEEEEEEE-CCEEEEEEe
Confidence 567899999999999875 3478889875321 24466677777766432 24444443332 457899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 85 y~~g~~L 91 (669)
T cd05610 85 YLIGGDV 91 (669)
T ss_pred CCCCCCH
Confidence 9999753
No 144
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.86 E-value=0.00029 Score=62.05 Aligned_cols=73 Identities=25% Similarity=0.136 Sum_probs=49.6
Q ss_pred eeCCcccceeEEEEeCC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 58 PVGGGCINLASRYGTDA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
.++.|..+.+|++...+ ..+++|...... ...+..|.+.++.+.+ -.+++++..... ....+++||+++|.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~~~~~ 77 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH---PNIVKLIGVCVQ-KQPIYIVMELVPGG 77 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeEEEEEEEec-CCCeEEEEEcCCCC
Confidence 46778888999998754 488899876432 2346678877777643 234455544332 46789999999987
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 78 ~l 79 (251)
T cd05041 78 SL 79 (251)
T ss_pred cH
Confidence 53
No 145
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.86 E-value=0.0001 Score=67.61 Aligned_cols=72 Identities=15% Similarity=0.067 Sum_probs=45.5
Q ss_pred eCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
+|.|..+.||++...+ + .+++|..... ....+..|..+++.+.+. .+.+++..... .+..+++|||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~~ 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCP---FIVPLKFSFQS-PEKLYLVLAFIN 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC---cEeceeeEEec-CCeEEEEEcCCC
Confidence 4678889999987643 3 6888876421 123345677777776431 23334333222 467899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 77 ~g~L 80 (312)
T cd05585 77 GGEL 80 (312)
T ss_pred CCcH
Confidence 9753
No 146
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.86 E-value=8.7e-05 Score=66.53 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=51.3
Q ss_pred eeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
.+.++.|....+|+....+ ..+.+|...... ...+..|+++++.+.+. .+.+++..... .+..++
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~l 85 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE---NIVKFYGVCTE-GDPPIM 85 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCC---CchheeeEEec-CCCeEE
Confidence 3557788888999986522 368889876422 24577888888887542 35555554433 467899
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
+|||++|+++
T Consensus 86 v~e~~~~~~L 95 (280)
T cd05049 86 VFEYMEHGDL 95 (280)
T ss_pred EEecCCCCCH
Confidence 9999999864
No 147
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.86 E-value=0.00036 Score=63.46 Aligned_cols=77 Identities=13% Similarity=0.082 Sum_probs=51.4
Q ss_pred eeeeeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 53 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
-.-++.++.|..+.+|++... +..+++|..... ....+..|...++.+.+ -.+.+++..... .+..+++||
T Consensus 21 y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e 96 (297)
T cd06656 21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVME 96 (297)
T ss_pred ceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCEEEEeec
Confidence 344677898999999998753 347888877532 23446667777776643 234555544322 457899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
|++|..
T Consensus 97 ~~~~~~ 102 (297)
T cd06656 97 YLAGGS 102 (297)
T ss_pred ccCCCC
Confidence 999975
No 148
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.85 E-value=0.00024 Score=69.48 Aligned_cols=75 Identities=16% Similarity=-0.009 Sum_probs=50.4
Q ss_pred eeeeCCcccceeEEEEeC-C--ccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTD-A--GSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~--~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+.+|.|....+|+.... + ..+++|...... ...+..|+..++.+.+ -.+++++..... .+..++||||+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H---pniv~~~~~~~~-~~~~~lv~E~~ 147 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH---FGIVKHFDDFKS-DDKLLLIMEYG 147 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEEE-CCEEEEEEECC
Confidence 455678888899998643 2 367788654322 2345668877776643 246667665443 56889999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 148 ~gg~L 152 (478)
T PTZ00267 148 SGGDL 152 (478)
T ss_pred CCCCH
Confidence 99864
No 149
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.85 E-value=0.0003 Score=63.28 Aligned_cols=78 Identities=17% Similarity=0.079 Sum_probs=53.2
Q ss_pred eeeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceecccc----CCCceEEEE
Q 020294 55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSYIIM 126 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~~~~~~~v~ 126 (328)
-++.++.|..+.+|++.... ..+++|..... ....+..|..+++.+.++ -.+++++..... ..+..+++|
T Consensus 22 ~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~~~~lv~ 99 (286)
T cd06638 22 IIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH--PNVVKFYGMYYKKDVKNGDQLWLVL 99 (286)
T ss_pred eeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcC--CCeeeeeeeeeecccCCCCeEEEEE
Confidence 34568888999999987643 37888986542 234567788888888654 245556554311 135689999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 100 e~~~~~~L 107 (286)
T cd06638 100 ELCNGGSV 107 (286)
T ss_pred eecCCCCH
Confidence 99999864
No 150
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.84 E-value=0.00024 Score=64.72 Aligned_cols=74 Identities=14% Similarity=0.061 Sum_probs=49.7
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
-++.+|.|..+.||++... + ..+++|+.... .......|+.+++.+.+. .+.+++..... ....+++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~-~~~~~lv~e~ 84 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHA---NIVLLHDIIHT-KETLTLVFEY 84 (303)
T ss_pred EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCC---CcCeEEEEEec-CCeEEEEEEC
Confidence 4677899999999999874 3 37889987531 123456788888877542 24444443332 4578999999
Q ss_pred ecCC
Q 020294 129 IEFG 132 (328)
Q Consensus 129 l~G~ 132 (328)
++|.
T Consensus 85 ~~~~ 88 (303)
T cd07869 85 VHTD 88 (303)
T ss_pred CCcC
Confidence 9763
No 151
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.84 E-value=5.5e-05 Score=70.03 Aligned_cols=74 Identities=9% Similarity=0.036 Sum_probs=48.8
Q ss_pred eeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++.... ..+++|+.... ....+..|..+++.+.++ -.++.++..... .+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~lv~e~~ 78 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSN--PFLVGLHSCFQT-TSRLFLVIEYV 78 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCC--CCEeeEEEEEEe-CCEEEEEEeCC
Confidence 47888999999998643 36888887531 123355677777666543 235555544332 45789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 79 ~~~~L 83 (327)
T cd05617 79 NGGDL 83 (327)
T ss_pred CCCcH
Confidence 99754
No 152
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.84 E-value=0.00022 Score=65.25 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=49.6
Q ss_pred eeeeeeCCcccceeEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
..++.+|.|..+.||+.... +..+++|..... ....+..|++.++.+.+. .+.+++..... ++..+++||
T Consensus 9 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e 84 (309)
T cd07872 9 IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA---NIVTLHDIVHT-DKSLTLVFE 84 (309)
T ss_pred EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCC---CcceEEEEEee-CCeEEEEEe
Confidence 44677899999999998764 236888876421 123455788888877542 34455554332 467899999
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
|+++
T Consensus 85 ~~~~ 88 (309)
T cd07872 85 YLDK 88 (309)
T ss_pred CCCC
Confidence 9876
No 153
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.83 E-value=0.00016 Score=63.99 Aligned_cols=74 Identities=19% Similarity=0.150 Sum_probs=51.2
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
.+.++.|..+.+|+....+..+++|..+.. ....+..|...++.+.+. .+.+++.... .+..+++|||++|+.+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~---~i~~~~~~~~--~~~~~~v~e~~~~~~L 85 (254)
T cd05083 11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHK---NLVRLLGVIL--HNGLYIVMELMSKGNL 85 (254)
T ss_pred eeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCC---CcCeEEEEEc--CCCcEEEEECCCCCCH
Confidence 456788888899988766668999988643 334567788888777542 3344444332 2456999999998754
No 154
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.82 E-value=0.00021 Score=66.22 Aligned_cols=73 Identities=15% Similarity=0.125 Sum_probs=50.4
Q ss_pred eeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 58 PVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
.||.|....||+-.... + ...+|--... ..+.+..|+.+|+.|.+ -.+-+++..-.. ++..|+||||++
T Consensus 17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H---~nIV~l~d~~~~-~~~i~lVMEyC~ 92 (429)
T KOG0595|consen 17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH---PNIVRLLDCIED-DDFIYLVMEYCN 92 (429)
T ss_pred hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC---cceeeEEEEEec-CCeEEEEEEeCC
Confidence 39999999999976543 3 5556654432 24567789999998864 234445544333 468899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+++
T Consensus 93 gGDL 96 (429)
T KOG0595|consen 93 GGDL 96 (429)
T ss_pred CCCH
Confidence 9864
No 155
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.81 E-value=0.00019 Score=64.77 Aligned_cols=72 Identities=14% Similarity=0.004 Sum_probs=45.9
Q ss_pred eCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
+|.|..+.||++... ++ .+++|..... ....+..|.++++.+.+. .+.+++..... .+..+++|||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e~~~ 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSR---FIVSLAYAFQT-KTDLCLVMTIMN 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCC---cEeeeeEEEcC-CCeEEEEEeCCC
Confidence 467888999998764 33 7888876531 113345678888777432 23333333222 457899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 77 ~g~L 80 (280)
T cd05608 77 GGDL 80 (280)
T ss_pred CCCH
Confidence 9864
No 156
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.81 E-value=6.6e-05 Score=69.56 Aligned_cols=74 Identities=8% Similarity=0.016 Sum_probs=47.7
Q ss_pred eeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++.... ..+.+|+.... ....+..|..++..+.++ -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~E~~ 78 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFFVIEYV 78 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCC--CcCCceeeEEEe-CCEEEEEEeCC
Confidence 47888999999998643 36888887531 122345666666655443 234455544332 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 79 ~~~~L 83 (329)
T cd05618 79 NGGDL 83 (329)
T ss_pred CCCCH
Confidence 99753
No 157
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.81 E-value=0.00042 Score=61.51 Aligned_cols=78 Identities=21% Similarity=0.148 Sum_probs=52.1
Q ss_pred ceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 52 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
...-.+.++.|..+.+|++...++ .+++|...... ...+..|.++++.+.+. .+.+++.... ....+++|||
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~--~~~~~~v~e~ 81 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD---KLVKLHAVVT--KEPIYIITEF 81 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCC---CcceEEEEEc--CCCeEEEEEe
Confidence 344566788899999999976544 78888775432 34567788888887543 2222232222 2578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 82 ~~~~~L 87 (260)
T cd05073 82 MAKGSL 87 (260)
T ss_pred CCCCcH
Confidence 998753
No 158
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.81 E-value=0.00023 Score=64.09 Aligned_cols=78 Identities=21% Similarity=0.194 Sum_probs=50.7
Q ss_pred eeeeeeCCcccceeEEEEeC------CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCce
Q 020294 54 TKICPVGGGCINLASRYGTD------AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS 122 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~------~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~ 122 (328)
..++.++.|..+.+|++... +..+++|..... ....+..|++.++.+.+. .+++.+...... ....
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 7 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE---NIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCC---CeeeeeeEEecCCCCce
Confidence 44667888999999998632 236888987532 124567788888877542 234444333221 2467
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||++|+.+
T Consensus 84 ~lv~e~~~g~~L 95 (284)
T cd05079 84 KLIMEFLPSGSL 95 (284)
T ss_pred EEEEEccCCCCH
Confidence 999999999864
No 159
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.81 E-value=0.00011 Score=68.03 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=47.0
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.+|.|..+.||++.... ..+++|+.... ....+..|..++..+.. -.++.++..... .+..++|||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~l~~~~~~-~~~~~lv~E 81 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC---QWITTLHYAFQD-ENYLYLVMD 81 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEEEe
Confidence 5678999999999997643 36888876421 11224455555544422 124444443332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 y~~gg~L 88 (331)
T cd05624 82 YYVGGDL 88 (331)
T ss_pred CCCCCcH
Confidence 9999854
No 160
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.79 E-value=6.4e-05 Score=73.98 Aligned_cols=78 Identities=19% Similarity=0.123 Sum_probs=52.7
Q ss_pred eeeeeeCCcccceeEEEE-eCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCce
Q 020294 54 TKICPVGGGCINLASRYG-TDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS 122 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~-~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~ 122 (328)
.--+.+|.|.++.||+-. ...| .+.+|.++.. ..+...+|+++|+.|... .+-+.++...+. ...+
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~---NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHP---NIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCch---hhhhhcccCCccccCcccccc
Confidence 345668899999999987 4455 6778888652 356677899999988632 122222222211 3467
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
.++|||+.|+.+
T Consensus 93 vlvmEyC~gGsL 104 (732)
T KOG4250|consen 93 VLVMEYCSGGSL 104 (732)
T ss_pred eEEEeecCCCcH
Confidence 999999999874
No 161
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.79 E-value=0.0002 Score=63.40 Aligned_cols=76 Identities=14% Similarity=0.082 Sum_probs=51.8
Q ss_pred eeeeeCCcccceeEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 55 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
-.+.++.|..+.+|++...+ +.+++|..... ....+..|.+.++.+.+ -.+++++..... .+..+++||+++|
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~ 83 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH---PNLVQLYGVCTK-QRPIFIVTEYMAN 83 (256)
T ss_pred hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCceEEEEecCCC
Confidence 34567888888999987654 47999987542 23456678888887753 235555554332 4678999999998
Q ss_pred CCC
Q 020294 132 GSS 134 (328)
Q Consensus 132 ~~~ 134 (328)
+.+
T Consensus 84 ~~L 86 (256)
T cd05059 84 GCL 86 (256)
T ss_pred CCH
Confidence 754
No 162
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.79 E-value=0.0002 Score=66.38 Aligned_cols=76 Identities=13% Similarity=0.042 Sum_probs=47.9
Q ss_pred eeeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
-++.+|.|..+.||++.... ..+++|+.... ....+..|..++..+.+ -.++.++..... .+..++||
T Consensus 5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~ 80 (332)
T cd05623 5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN---QWITTLHYAFQD-ENNLYLVM 80 (332)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCEEEEEE
Confidence 35678999999999988653 36888886421 12235556665554432 234444443332 46789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 81 ey~~~g~L 88 (332)
T cd05623 81 DYYVGGDL 88 (332)
T ss_pred eccCCCcH
Confidence 99999854
No 163
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.78 E-value=0.00036 Score=63.08 Aligned_cols=76 Identities=12% Similarity=0.054 Sum_probs=49.8
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
.++.+|.|..+.||++... ++ .+++|..... ....+..|..+++.+.+. .+..++..... ++..+++|
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~iv~~~~~~~~-~~~~~lv~ 79 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSR---FVVSLAYAYET-KDALCLVL 79 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCC---cEEEEEEEEcc-CCeEEEEE
Confidence 4567899999999998763 33 7888876421 122355688888877542 23333333222 45789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 80 e~~~~g~L 87 (285)
T cd05631 80 TIMNGGDL 87 (285)
T ss_pred EecCCCcH
Confidence 99999864
No 164
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.78 E-value=0.00018 Score=66.23 Aligned_cols=74 Identities=12% Similarity=0.024 Sum_probs=49.0
Q ss_pred eeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++.... ..+++|+.... ....+..|..+++.+.++ -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~ 78 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKH--PFLTQLHSCFQT-KDRLFFVMEYV 78 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence 46788889999987643 37889987531 123345677777766543 245556554332 45789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 79 ~~~~L 83 (318)
T cd05570 79 NGGDL 83 (318)
T ss_pred CCCCH
Confidence 99753
No 165
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.78 E-value=0.00038 Score=64.57 Aligned_cols=76 Identities=18% Similarity=0.052 Sum_probs=51.7
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
-++.++.|..+.+|++... ++ .+++|+.... . ...+..|+++++.+.+ -.+.+++..... ++..+++|||
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 84 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICMEH 84 (333)
T ss_pred eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CcccceeEEEEE-CCEEEEEEec
Confidence 3566888999999998765 33 5667765432 1 2446788888888854 235555554433 4688999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 85 ~~~~~L 90 (333)
T cd06650 85 MDGGSL 90 (333)
T ss_pred CCCCcH
Confidence 999754
No 166
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.77 E-value=0.00031 Score=63.54 Aligned_cols=75 Identities=13% Similarity=0.072 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.++.|....+|++.... ..+++|..... ....+..|++.++.+.+ -.+++++..... .+..+++||
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e 81 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH---PFLVNLYGSFQD-DSNLYLVME 81 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCccceeeEEEc-CCeEEEEEe
Confidence 5678888889999987643 47888876531 12445678888877753 235555554332 457899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~~~~L 88 (290)
T cd05580 82 YVPGGEL 88 (290)
T ss_pred cCCCCCH
Confidence 9988753
No 167
>PRK10345 hypothetical protein; Provisional
Probab=97.76 E-value=0.00022 Score=61.89 Aligned_cols=75 Identities=16% Similarity=0.175 Sum_probs=49.8
Q ss_pred eeeeeeeCCcccceeEEEEeCCccEEEEecCCC---CcchHHHHHHHHHHHHhcC--CCCcccceeccccCC--CceE-E
Q 020294 53 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSMFEGEALGLGAMYETR--TIRAPRPFKVGALPT--GGSY-I 124 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~--~v~VP~~~~~~~~~~--~~~~-~ 124 (328)
..+.+.+|.|....||. ...++..++|+.... ....+.+|+..++.|.... .-.+++++.+-.+.. |..+ +
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 44567899999999996 444556689886532 3456789999999996421 134777776655432 3323 6
Q ss_pred EEee
Q 020294 125 IMEF 128 (328)
Q Consensus 125 v~e~ 128 (328)
|+||
T Consensus 83 I~e~ 86 (210)
T PRK10345 83 IADF 86 (210)
T ss_pred EecC
Confidence 7888
No 168
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.76 E-value=0.0004 Score=61.11 Aligned_cols=73 Identities=19% Similarity=0.167 Sum_probs=51.5
Q ss_pred eeCCcccceeEEEEeC-----CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 58 PVGGGCINLASRYGTD-----AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~-----~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.++.|....+|++... ...+++|...... ...+..|++.++.+.. -.+++++..... .+..+++|||
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~ 77 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGH---PNVVRLLGVCTE-EEPLYLVLEY 77 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCC---CChheeeeeecC-CCceEEEEEe
Confidence 4677888899998875 3478999886532 3456678888887762 345555554433 4688999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
.+|+++
T Consensus 78 ~~~~~L 83 (262)
T cd00192 78 MEGGDL 83 (262)
T ss_pred ccCCcH
Confidence 999864
No 169
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.76 E-value=0.00034 Score=63.19 Aligned_cols=76 Identities=12% Similarity=0.034 Sum_probs=49.7
Q ss_pred eeeeCCcccceeEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
.+.++.|..+.+|++... +| .+++|..... ....+..|.++++.+.++ -.++.++..... ++..+
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~ 81 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS--PFLVTLHYAFQT-DTKLH 81 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccC--CChhceeeEeec-CCeEE
Confidence 456788888999998752 33 6888877531 123456788888887654 234444433322 45778
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
++|||++|+.+
T Consensus 82 lv~e~~~~~~L 92 (290)
T cd05613 82 LILDYINGGEL 92 (290)
T ss_pred EEEecCCCCcH
Confidence 99999998753
No 170
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.76 E-value=0.00033 Score=64.47 Aligned_cols=27 Identities=30% Similarity=0.294 Sum_probs=24.4
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||+++.++.+.|+|+.
T Consensus 115 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg 141 (321)
T cd05603 115 LNIIYRDLKPENILLDSQGHVVLTDFG 141 (321)
T ss_pred CCeEeccCCHHHeEECCCCCEEEccCC
Confidence 469999999999999998888999975
No 171
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.76 E-value=0.00026 Score=65.30 Aligned_cols=27 Identities=30% Similarity=0.272 Sum_probs=24.2
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||++++++...|+|+.
T Consensus 115 ~giiHrDlkp~Nili~~~~~~kl~DfG 141 (325)
T cd05602 115 LNIVYRDLKPENILLDSQGHIVLTDFG 141 (325)
T ss_pred CCeEecCCCHHHeEECCCCCEEEccCC
Confidence 469999999999999988888999975
No 172
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.75 E-value=0.00051 Score=62.70 Aligned_cols=76 Identities=16% Similarity=0.162 Sum_probs=50.1
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cE--EEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SF--FVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~--vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.+|.|..+.+|++... ++ .+ .+|..... ....+..|.+.+..+.++ -.+++++..... ++..+++||
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h--~~iv~~~~~~~~-~~~~~lv~e 88 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIE 88 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCC--CCcceEEEEECC-CCCceEEEE
Confidence 355888999999999753 33 33 44443321 123466788888888554 246667665543 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 89 ~~~~~~L 95 (303)
T cd05088 89 YAPHGNL 95 (303)
T ss_pred eCCCCcH
Confidence 9998753
No 173
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.75 E-value=0.00063 Score=60.08 Aligned_cols=74 Identities=22% Similarity=0.142 Sum_probs=50.5
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+.++.|..+.+|++... +..+++|..+.. ....+..|...++.+.+. .+++++..... .+..+++|||+
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~~ 80 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHP---NIVAFKESFEA-DGHLYIVMEYC 80 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCC---CcceEEEEEEE-CCEEEEEEeeC
Confidence 466888889999999764 348899986421 124456677777776542 34555554433 46889999999
Q ss_pred cCCC
Q 020294 130 EFGS 133 (328)
Q Consensus 130 ~G~~ 133 (328)
+|+.
T Consensus 81 ~~~~ 84 (255)
T cd08219 81 DGGD 84 (255)
T ss_pred CCCc
Confidence 9875
No 174
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.74 E-value=0.00028 Score=65.26 Aligned_cols=27 Identities=26% Similarity=0.193 Sum_probs=24.3
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||+++.++...|+|+.
T Consensus 115 ~~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 115 YDIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred CCeEeccCCHHHeEECCCCCEEEecCC
Confidence 369999999999999988888999975
No 175
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.74 E-value=0.00051 Score=60.71 Aligned_cols=75 Identities=17% Similarity=0.111 Sum_probs=52.6
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
.+.++.|..+.+|+....+..+++|...... ...+..|...++.+.+. .+.+++..... .+..+++|||.+|..
T Consensus 11 ~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~~~~~~ 86 (256)
T cd05039 11 GATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHP---NLVQLLGVVLQ-GNPLYIVTEYMAKGS 86 (256)
T ss_pred eeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCc---ceeeeEEEEcC-CCCeEEEEEecCCCc
Confidence 4567888889999998877789999987532 34566788888877542 23344443332 467899999999875
Q ss_pred C
Q 020294 134 S 134 (328)
Q Consensus 134 ~ 134 (328)
+
T Consensus 87 L 87 (256)
T cd05039 87 L 87 (256)
T ss_pred H
Confidence 3
No 176
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.73 E-value=0.00041 Score=64.00 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=24.4
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||++++++...|+|+.
T Consensus 115 ~givH~Dlkp~NIll~~~~~~kL~DfG 141 (325)
T cd05604 115 INIVYRDLKPENILLDSQGHVVLTDFG 141 (325)
T ss_pred CCeeecCCCHHHeEECCCCCEEEeecC
Confidence 469999999999999988888999975
No 177
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.72 E-value=0.00048 Score=62.03 Aligned_cols=73 Identities=14% Similarity=0.116 Sum_probs=48.2
Q ss_pred eeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|..+.+|++.... + .+++|..... ....+..|+++++.+.+. .+.+++..... ++..++||||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~ 81 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE---NIVELKEAFRR-RGKLYLVFEY 81 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCc---cccchhhhEec-CCEEEEEEec
Confidence 5567888999999998753 3 6888876431 134466788888877542 23333332222 4678999999
Q ss_pred ecCC
Q 020294 129 IEFG 132 (328)
Q Consensus 129 l~G~ 132 (328)
++|+
T Consensus 82 ~~~~ 85 (287)
T cd07848 82 VEKN 85 (287)
T ss_pred CCCC
Confidence 9985
No 178
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=97.72 E-value=0.00042 Score=64.48 Aligned_cols=107 Identities=20% Similarity=0.181 Sum_probs=57.5
Q ss_pred cccchhhhhhhhcCChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEE-EeCCc-cEEEEecCCC----------Ccch
Q 020294 22 ISFSKRRTFAMAALSDDPIREWILSEGKATHITKICPVGGGCINLASRY-GTDAG-SFFVKTNRSI----------GPSM 89 (328)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v-~~~~~-~~vlK~~~~~----------~~~~ 89 (328)
.+.++...+++..++.+.=.-.-+.. .+..+. .+.+|.|....|=.. ...+| .|.+|+.... ....
T Consensus 145 is~p~~~~~v~~~~s~d~~~~~pks~-~d~yii-~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~ 222 (475)
T KOG0615|consen 145 ISIPALKIFVFEDLSRDSSKVPPKSF-NDYYII-SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRD 222 (475)
T ss_pred eccchhheeeeecccchhccCccchh-cceeEe-eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhh
Confidence 34455556666555444211111111 122232 355777777765543 33344 7888887521 1122
Q ss_pred HHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 90 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 90 ~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
++.|.++|+.|.+= .+-++...-.. +...||||||++|+.+
T Consensus 223 v~~EieILkkL~HP---~IV~~~d~f~~-~ds~YmVlE~v~GGeL 263 (475)
T KOG0615|consen 223 VQNEIEILKKLSHP---NIVRIKDFFEV-PDSSYMVLEYVEGGEL 263 (475)
T ss_pred hHHHHHHHHhcCCC---CEEEEeeeeec-CCceEEEEEEecCccH
Confidence 46899999988541 12233322211 3566999999999854
No 179
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.72 E-value=0.00046 Score=61.23 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=52.1
Q ss_pred eeeeeeCCcccceeEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 54 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
.-.+.++.|..+.+|.....++ .+.+|..... ..+.+..|...++.+.+ -.+++++..... ....+++|||++
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 82 (256)
T cd05113 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH---EKLVQLYGVCTK-QRPIYIVTEYMS 82 (256)
T ss_pred EEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCC---CCeeeEEEEEcc-CCCcEEEEEcCC
Confidence 3456788898999999876554 6888876542 23446678877777643 245566655433 356799999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 83 ~~~l 86 (256)
T cd05113 83 NGCL 86 (256)
T ss_pred CCcH
Confidence 8753
No 180
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.71 E-value=0.00048 Score=61.66 Aligned_cols=78 Identities=24% Similarity=0.181 Sum_probs=51.4
Q ss_pred eeeeeeCCcccceeEEEEeC------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCce
Q 020294 54 TKICPVGGGCINLASRYGTD------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS 122 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~ 122 (328)
.-++.++.|..+.+|++..+ ...+++|...... ...+..|++.++.+.. -.+++++...... ....
T Consensus 7 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~---~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 7 KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH---ENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC---CChheEEeeeecCCCCce
Confidence 33567888889999998753 2378899876432 2456778877777743 2344555443321 2367
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||++|+.+
T Consensus 84 ~lv~e~~~~~~l 95 (284)
T cd05038 84 RLIMEYLPSGSL 95 (284)
T ss_pred EEEEecCCCCCH
Confidence 999999998754
No 181
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.71 E-value=0.00021 Score=63.61 Aligned_cols=74 Identities=19% Similarity=0.060 Sum_probs=49.9
Q ss_pred eeeCCcccceeEEEEeCCc-cEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 57 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
+.++.|..+.+|+....++ .+++|...... ...+..|++.++.+.+ ..+++++..... .+..++++
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~ 81 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH---VNIVQYLGTCLD-DNTISIFM 81 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC---CCEeeEeeEeec-CCeEEEEE
Confidence 4577888899999877555 68888764211 1346677777777753 245555554433 46889999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 82 e~~~~~~L 89 (265)
T cd06631 82 EFVPGGSI 89 (265)
T ss_pred ecCCCCcH
Confidence 99999753
No 182
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.71 E-value=0.00037 Score=63.87 Aligned_cols=137 Identities=22% Similarity=0.271 Sum_probs=82.5
Q ss_pred ceeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCC-CC---cchHHHHHHHHHHHHhcCCCCcccceecc-cc-CCC-ce
Q 020294 52 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS-IG---PSMFEGEALGLGAMYETRTIRAPRPFKVG-AL-PTG-GS 122 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~-~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~-~~-~~~-~~ 122 (328)
.+..+..+|.|....||++... ++ -|.+|.-.. .. ...+.+|.++++.- ..|-++.+. .+ .++ .-
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~------~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC------QSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC------CCCCeeeEeEEEEeCCceE
Confidence 5566777899999999999864 34 567776632 11 23455676665543 334444321 11 145 48
Q ss_pred EEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCCh
Q 020294 123 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 202 (328)
Q Consensus 123 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~ 202 (328)
.++|||.+|+.+ ..++.... ..| + ..+.
T Consensus 154 sI~mEYMDgGSL-----------d~~~k~~g--------------~i~----------E----~~L~------------- 181 (364)
T KOG0581|consen 154 SICMEYMDGGSL-----------DDILKRVG--------------RIP----------E----PVLG------------- 181 (364)
T ss_pred EeehhhcCCCCH-----------HHHHhhcC--------------CCC----------H----HHHH-------------
Confidence 999999999973 33333211 000 0 0011
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294 203 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC 253 (328)
Q Consensus 203 ~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~ 253 (328)
....++++.+..+ . ....+||+|++|.|||+...|++.|.||.+
T Consensus 182 ---~ia~~VL~GL~YL-h---~~~~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 182 ---KIARAVLRGLSYL-H---EERKIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred ---HHHHHHHHHHHHH-h---hccCeeeccCCHHHeeeccCCCEEeccccc
Confidence 1122334444432 2 236899999999999999989999999863
No 183
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.70 E-value=0.00016 Score=66.62 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=46.8
Q ss_pred eeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.||++...+ ..+++|..... .......|..++..+.++ -.+++++..... .+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~ey~ 78 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHLYCTFQT-KENLFFVMEYL 78 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CcCcceEEEEEe-CCEEEEEEeCC
Confidence 47888899999998643 36888976531 122334566665544333 234555554333 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 79 ~~g~L 83 (316)
T cd05619 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 99854
No 184
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.70 E-value=0.00072 Score=59.31 Aligned_cols=75 Identities=15% Similarity=0.084 Sum_probs=49.9
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|....+|++... +..+++|..... ....+..|.++++.+.. -.+.+++..... .+..++++||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~~~~~~~~-~~~~~lv~e~ 80 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH---PNIIKYYESFEE-KGKLCIVMEY 80 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC---CChhheEEEEec-CCEEEEEEEe
Confidence 456778888999999875 348999987532 12346677777777753 224444433222 3688999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|..+
T Consensus 81 ~~~~~L 86 (258)
T cd08215 81 ADGGDL 86 (258)
T ss_pred cCCCcH
Confidence 998753
No 185
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.70 E-value=0.00061 Score=61.11 Aligned_cols=76 Identities=16% Similarity=0.077 Sum_probs=48.2
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.++.++.|..+.+|+.... + ..+++|...... ...+..|...++.+.+ -.+.+++..... .+..++||||
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-DTKLWIIMEY 83 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC---CCEeEEEEEEEe-CCeEEEEEEe
Confidence 3456888888999998653 3 378889865321 1335566666666543 124444443322 4578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 84 ~~~~~l 89 (277)
T cd06641 84 LGGGSA 89 (277)
T ss_pred CCCCcH
Confidence 998753
No 186
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.68 E-value=0.00052 Score=64.81 Aligned_cols=134 Identities=19% Similarity=0.143 Sum_probs=83.3
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
...+|.|..+.|+..... +..+.+|+.... ....+.+|..+++.+..+. .+-+++.+-.+ ....++|
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~Hp--nI~~l~ev~~t-~~~~~iv 98 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHP--NIIRLLEVFAT-PTKIYIV 98 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCC--CEeEEEEEEec-CCeEEEE
Confidence 556888999999998543 347888875431 1344667998888887442 34444444333 3458999
Q ss_pred EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294 126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205 (328)
Q Consensus 126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 205 (328)
|||+.|+.+ +..+..... +. + . +..
T Consensus 99 mEy~~gGdL----------~~~i~~~g~---------------l~------E--------~----------------~ar 123 (370)
T KOG0583|consen 99 MEYCSGGDL----------FDYIVNKGR---------------LK------E--------D----------------EAR 123 (370)
T ss_pred EEecCCccH----------HHHHHHcCC---------------CC------h--------H----------------HHH
Confidence 999999532 333333110 00 0 0 001
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEccc
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPA 252 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID~~ 252 (328)
....++++.+... ...+++|+||+++|+|++.+ +...|+||+
T Consensus 124 ~~F~Qlisav~y~-----H~~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 124 KYFRQLISAVAYC-----HSRGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred HHHHHHHHHHHHH-----HhCCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 2333444444321 24589999999999999998 788999985
No 187
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.68 E-value=0.00089 Score=59.52 Aligned_cols=78 Identities=23% Similarity=0.169 Sum_probs=51.2
Q ss_pred eeeeeeeCCcccceeEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 53 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
..-...++.|....+|++... +..+++|...... ...+..|.+.++.+.+. .+.+++..... ++..+++|||
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~ 83 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP---NLVQLLGVCTR-EPPFYIITEF 83 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCC---ChhheEEEEcC-CCCcEEEEEe
Confidence 344566788888899997654 3478889876432 23466788888877542 33344443322 4677999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 84 ~~~~~L 89 (263)
T cd05052 84 MTYGNL 89 (263)
T ss_pred CCCCcH
Confidence 998754
No 188
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.68 E-value=0.00066 Score=63.23 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=52.3
Q ss_pred eeeeeeeCCcccceeEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 53 ITKICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~------~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
..-.+.+|.|..+.||+... .+ ..+.+|+..... ...+..|+.++..+.++ -.+.+++.......+.
T Consensus 9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~ 86 (343)
T cd05103 9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGGP 86 (343)
T ss_pred hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCC--ccHhhhcceeecCCCc
Confidence 33456689999999999852 12 368888875321 23456788888888543 2355555443322356
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++|||++|+.+
T Consensus 87 ~~lv~ey~~~g~L 99 (343)
T cd05103 87 LMVIVEFCKFGNL 99 (343)
T ss_pred eEEEEeccCCCcH
Confidence 7899999999865
No 189
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.68 E-value=0.00057 Score=61.48 Aligned_cols=72 Identities=14% Similarity=0.016 Sum_probs=45.1
Q ss_pred eCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
+|.|..+.||++.... + .|.+|..... .......|.++++.+.+ -.+.+++..... +...+++|||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~~ 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS---PFIVNLAYAFES-KTHLCLVMSLMN 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC---CcEEEEEEEEec-CCeEEEEEecCC
Confidence 4678889999988643 3 7888876421 12234457888877743 123334333222 457899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 77 g~~L 80 (277)
T cd05607 77 GGDL 80 (277)
T ss_pred CCCH
Confidence 9764
No 190
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.68 E-value=0.00069 Score=60.05 Aligned_cols=75 Identities=12% Similarity=-0.013 Sum_probs=50.2
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.++.|..+.+|++... ++ .+++|.... .....+..|++.++.+.+ -.+++++..... ++..+++||
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 82 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH---PNVIKYLASFIE-NNELNIVLE 82 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC---CCeeeeeeeeec-CCeEEEEEe
Confidence 455788888999999875 33 788886642 113456678887777743 234445544332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+++
T Consensus 83 ~~~~~~L 89 (267)
T cd08224 83 LADAGDL 89 (267)
T ss_pred cCCCCCH
Confidence 9999753
No 191
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.68 E-value=0.00038 Score=62.78 Aligned_cols=76 Identities=12% Similarity=0.001 Sum_probs=49.4
Q ss_pred eeeeCCcccceeEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 56 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
.+.++.|..+.+|++... + ..+++|..... ....+..|.++++.+.++ -.+++++..... +...+
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~--~~i~~~~~~~~~-~~~~~ 81 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRC--PFLVTLHYAFQT-DTKLH 81 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCC--cchhhhheeeec-CCEEE
Confidence 466888999999998642 2 36888876521 123456788888888654 234444433222 35778
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
+||||++|+.+
T Consensus 82 lv~e~~~~~~L 92 (288)
T cd05583 82 LILDYVNGGEL 92 (288)
T ss_pred EEEecCCCCcH
Confidence 99999998753
No 192
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.67 E-value=0.00052 Score=62.44 Aligned_cols=74 Identities=12% Similarity=0.075 Sum_probs=50.3
Q ss_pred eeeeeeCCcccceeEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
..++.++.|..+.+|++... +..+++|..... ....+..|...++.|.+ -.+.+++..... .+..+++||
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~nI~~~~~~~~~-~~~~~lv~e 84 (301)
T cd07873 9 IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIIHT-EKSLTLVFE 84 (301)
T ss_pred EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC---CCcceEEEEEec-CCeEEEEEe
Confidence 44677899999999998764 347888876521 12345678888887754 235555554433 467899999
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
|++|
T Consensus 85 ~~~~ 88 (301)
T cd07873 85 YLDK 88 (301)
T ss_pred cccc
Confidence 9876
No 193
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.67 E-value=0.00054 Score=61.72 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=52.2
Q ss_pred eeeeeeCCcccceeEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.-...++.|....+|++... +..+++|...... ...+..|.+.++.+.+ -.+++++..... .+..++++||+
T Consensus 22 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~ 97 (286)
T cd06614 22 KNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH---PNIVDYYDSYLV-GDELWVVMEYM 97 (286)
T ss_pred hHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC---CCeeEEEEEEEE-CCEEEEEEecc
Confidence 33456788888899998775 4588999876432 3456678877777754 235555544332 46889999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 98 ~~~~L 102 (286)
T cd06614 98 DGGSL 102 (286)
T ss_pred CCCcH
Confidence 98754
No 194
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.67 E-value=0.0009 Score=58.35 Aligned_cols=74 Identities=15% Similarity=0.077 Sum_probs=51.7
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
.+.++.|....+|++... + ..+++|..+.. ....+..|.+.++.+.. -.+++++..... +...++++||++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~ 80 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH---PNIVKYYGSYLK-KDELWIVMEFCS 80 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC---CCEeEEEEEEec-CCeEEEEEecCC
Confidence 456788888999999875 3 37889988643 23456678877777753 345556554332 467899999999
Q ss_pred CCC
Q 020294 131 FGS 133 (328)
Q Consensus 131 G~~ 133 (328)
|..
T Consensus 81 ~~~ 83 (253)
T cd05122 81 GGS 83 (253)
T ss_pred CCc
Confidence 875
No 195
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.67 E-value=0.00058 Score=61.71 Aligned_cols=79 Identities=18% Similarity=0.127 Sum_probs=52.7
Q ss_pred eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEEE
Q 020294 54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYII 125 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~v 125 (328)
.-++.++.|..+.+|++... ++ .+++|..... ....+..|...++.+.++ -.+++++...... .+..+++
T Consensus 25 ~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 25 EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH--PNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCC--CCeEEEEEEEEeccccCCCeeEEE
Confidence 33456788888999998874 33 7888887542 234566788888877543 2455555543221 2468999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 103 ~ey~~~~sL 111 (291)
T cd06639 103 LELCNGGSV 111 (291)
T ss_pred EEECCCCcH
Confidence 999999753
No 196
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.67 E-value=0.00023 Score=64.97 Aligned_cols=75 Identities=15% Similarity=-0.012 Sum_probs=49.6
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.++.|..+.+|+..... ..+++|..... ....+..|.+.++.+.+ -.+++++..... .+..+++||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN---PFVVSMFCSFET-KRHLCMVME 81 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC---CCeeeeEEEEec-CCEEEEEEe
Confidence 5668888889999987643 37888876532 12345567777776643 235556554332 457799999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~g~~L 88 (305)
T cd05609 82 YVEGGDC 88 (305)
T ss_pred cCCCCcH
Confidence 9999753
No 197
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.66 E-value=0.00061 Score=61.45 Aligned_cols=76 Identities=16% Similarity=0.139 Sum_probs=47.2
Q ss_pred eeeeCCcccceeEEEEe-C-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc----CCCceE
Q 020294 56 ICPVGGGCINLASRYGT-D-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSY 123 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~-~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~~~~~~ 123 (328)
++.++.|..+.||++.. . ++ .+++|..... ....+..|.+.++.+.....-.+++++..... ..+..+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 45688999999999975 2 34 4677865421 12235568888887754222235555543221 135679
Q ss_pred EEEeeecC
Q 020294 124 IIMEFIEF 131 (328)
Q Consensus 124 ~v~e~l~G 131 (328)
++||+++|
T Consensus 86 lv~e~~~~ 93 (290)
T cd07862 86 LVFEHVDQ 93 (290)
T ss_pred EEEccCCC
Confidence 99999876
No 198
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.66 E-value=0.00073 Score=59.50 Aligned_cols=75 Identities=19% Similarity=0.129 Sum_probs=48.9
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|....+|++.... ..+++|..... ....+..|.+.++.+.+ -.+.+++..... .+..+++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~ 80 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS---SYIIRYYESFLD-KGKLNIVMEY 80 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC---CCeehheeeecc-CCEEEEEEEe
Confidence 3557788888999998643 37888876421 13345567777776643 234444544332 4678999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|..+
T Consensus 81 ~~~~~L 86 (256)
T cd08529 81 AENGDL 86 (256)
T ss_pred CCCCcH
Confidence 999753
No 199
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.65 E-value=0.00081 Score=61.51 Aligned_cols=76 Identities=17% Similarity=0.027 Sum_probs=50.4
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
-.+.++.|....+|++... ++ .+++|...... ...+..|+++++.+.+. .+.+++..... ++..+++|||
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~ey 80 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSP---YIVGFYGAFYS-DGEISICMEH 80 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCC---CCCeEEEEEee-CCEEEEEeec
Confidence 4566888999999998764 33 67777765321 23356788888877432 34445543322 4688999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 81 ~~~~~L 86 (308)
T cd06615 81 MDGGSL 86 (308)
T ss_pred cCCCcH
Confidence 999754
No 200
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.65 E-value=0.00069 Score=60.90 Aligned_cols=79 Identities=20% Similarity=0.161 Sum_probs=51.5
Q ss_pred eeeeeeeCCcccceeEEEEeC-----Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCce
Q 020294 53 ITKICPVGGGCINLASRYGTD-----AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS 122 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-----~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~ 122 (328)
..-++.++.|..+.+|++... ++ .+++|...... ...+..|.++++.+.+ -.+++.+...... ....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCeeEEEEEEccCCCCce
Confidence 334667889999999998632 23 68888875432 2356778888887753 2344454433221 2467
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||++|+++
T Consensus 83 ~lv~e~~~~~~L 94 (284)
T cd05081 83 RLVMEYLPYGSL 94 (284)
T ss_pred EEEEEecCCCCH
Confidence 899999998864
No 201
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.65 E-value=0.00033 Score=62.31 Aligned_cols=75 Identities=12% Similarity=-0.014 Sum_probs=49.1
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.++.|..+.+|+.... +..+++|..... . ...+..|++.++.+.+ -.+++++..... .+..++++|
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e 82 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH---PNVIKYLDSFIE-DNELNIVLE 82 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC---cceeeeeeeEEE-CCeEEEEEE
Confidence 455788889999998763 347888865421 1 2335668888777743 234455544332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 83 ~~~~~~L 89 (267)
T cd08228 83 LADAGDL 89 (267)
T ss_pred ecCCCcH
Confidence 9998753
No 202
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=97.65 E-value=0.00068 Score=63.67 Aligned_cols=73 Identities=19% Similarity=0.197 Sum_probs=50.4
Q ss_pred eCCcccceeEEEEeCCcc-EEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 59 VGGGCINLASRYGTDAGS-FFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 59 i~~G~~n~~y~v~~~~~~-~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
+|.|....||+..-.... ..+|+..... ...+..|+.+|..|.+- .|-+.+.+...+.+...+||||++|+
T Consensus 49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~Hp---NIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHP---NIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred cccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCC---CeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 788999999988766555 6777775421 23788999999887652 23335554443223579999999998
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 126 sL 127 (362)
T KOG0192|consen 126 SL 127 (362)
T ss_pred cH
Confidence 63
No 203
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.65 E-value=8.3e-05 Score=71.40 Aligned_cols=72 Identities=13% Similarity=0.107 Sum_probs=53.2
Q ss_pred eeeeeeCCcccceeEEEEeCCc-cEEEEe-cC----CCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 54 TKICPVGGGCINLASRYGTDAG-SFFVKT-NR----SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~~-~~vlK~-~~----~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
..++.||.|.++.||+|...+. -|++|. .. ......+..|.+.|..|..+ ..|-++|.+.-. ++.-|||||
T Consensus 364 eilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~--~~IIqL~DYEv~-d~~lYmvmE 440 (677)
T KOG0596|consen 364 EILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH--DKIIQLYDYEVT-DGYLYMVME 440 (677)
T ss_pred hHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC--ceEEEEeeeecc-CceEEEEee
Confidence 3466788899999999987653 454443 21 12345688999999999875 678888887655 789999999
Q ss_pred e
Q 020294 128 F 128 (328)
Q Consensus 128 ~ 128 (328)
+
T Consensus 441 ~ 441 (677)
T KOG0596|consen 441 C 441 (677)
T ss_pred c
Confidence 7
No 204
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.64 E-value=0.00097 Score=58.82 Aligned_cols=78 Identities=19% Similarity=0.148 Sum_probs=53.5
Q ss_pred eeeeeeeCCcccceeEEEEeC-CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 53 ITKICPVGGGCINLASRYGTD-AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
..-.+.++.|..+.+|+.... +..+.+|..... ....+..|.+.++.+.+. .+.+++..... .+..+++|||+
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~~ 81 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHP---KLVQLYGVCTE-RSPICLVFEFM 81 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCC---CeeeEEEEEcc-CCceEEEEEcC
Confidence 344567888888999998765 447888876542 234577888888887542 34455544332 45779999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 82 ~~~~L 86 (256)
T cd05112 82 EHGCL 86 (256)
T ss_pred CCCcH
Confidence 99753
No 205
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.64 E-value=0.00063 Score=61.01 Aligned_cols=74 Identities=14% Similarity=0.020 Sum_probs=50.4
Q ss_pred eeeCCcccceeEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 57 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
+.++.|..+.+|++... ...+++|...... ...+..|+++++.+.+ -.+++++..... .+..+++|||++|
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 86 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH---PNIVGLYEAYFY-ENKLWILIEFCDG 86 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEec-CCeEEEEeeccCC
Confidence 34677888999999764 2378889875432 2345678888777753 245666654433 4678999999999
Q ss_pred CCC
Q 020294 132 GSS 134 (328)
Q Consensus 132 ~~~ 134 (328)
+.+
T Consensus 87 ~~L 89 (280)
T cd06611 87 GAL 89 (280)
T ss_pred CcH
Confidence 753
No 206
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.64 E-value=0.0016 Score=59.22 Aligned_cols=79 Identities=11% Similarity=0.080 Sum_probs=51.7
Q ss_pred ceeeeeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 52 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
.-.-++.++.|..+.+|+.... +..+.+|..... ....+..|..+++.+.+ -.+.+++..... ....++||
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h---~~v~~~~~~~~~-~~~~~lv~ 96 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVM 96 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC---CCEeeEEEEEEe-CCEEEEee
Confidence 3445667888999999998753 347888866532 23456678887776643 234445443322 45789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 97 e~~~~~~L 104 (296)
T cd06654 97 EYLAGGSL 104 (296)
T ss_pred cccCCCCH
Confidence 99999753
No 207
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.64 E-value=0.00077 Score=60.87 Aligned_cols=76 Identities=13% Similarity=0.067 Sum_probs=49.8
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
..+.+|.|..+.+|+.... ++ .+++|..... ....+..|+++++.+.+. .++.++..... ++..+++|
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~ 79 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ---FVVNLAYAYET-KDALCLVL 79 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCc---CceeEEEEEec-CCEEEEEE
Confidence 3566888999999998764 33 6888876431 123355688888888542 33334333222 45789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 80 e~~~~~~L 87 (285)
T cd05632 80 TIMNGGDL 87 (285)
T ss_pred EeccCccH
Confidence 99998753
No 208
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.64 E-value=0.0005 Score=63.39 Aligned_cols=27 Identities=30% Similarity=0.294 Sum_probs=24.3
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||++++++...|+|+.
T Consensus 115 ~givH~dikp~NIll~~~~~~kl~Dfg 141 (323)
T cd05575 115 LNIIYRDLKPENILLDSQGHVVLTDFG 141 (323)
T ss_pred CCeEeCCCCHHHeEECCCCcEEEeccC
Confidence 369999999999999988888999975
No 209
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.63 E-value=0.00094 Score=59.75 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=48.4
Q ss_pred ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+.+...++.|..+.+|.+... + ..|++|......... .|......+.++ -.+++++..... .+..++||||+
T Consensus 17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~e~~~~~~~~~h--~~iv~~~~~~~~-~~~~~iv~e~~ 91 (267)
T PHA03390 17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--IEPMVHQLMKDN--PNFIKLYYSVTT-LKGHVLIMDYI 91 (267)
T ss_pred ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--hhHHHHHHhhcC--CCEEEEEEEEec-CCeeEEEEEcC
Confidence 4444444899999999998864 2 378888876422111 233333333333 356666655433 45789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+++
T Consensus 92 ~~~~L 96 (267)
T PHA03390 92 KDGDL 96 (267)
T ss_pred CCCcH
Confidence 98753
No 210
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.63 E-value=0.00055 Score=65.17 Aligned_cols=70 Identities=11% Similarity=-0.032 Sum_probs=48.0
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
-++.++.|..+.||++... . ..+++|.... ..+..|+++++.|.+. .+.+++..... .+..+++++++.|
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l~Hp---nIv~~~~~~~~-~~~~~lv~e~~~~ 167 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAINHP---SIIQLKGTFTY-NKFTCLILPRYKT 167 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhCCCC---CCCCEeEEEEE-CCeeEEEEecCCC
Confidence 3567899999999998764 3 3778887542 3467899999988652 34445543322 4577899998754
No 211
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.63 E-value=0.00082 Score=60.68 Aligned_cols=79 Identities=16% Similarity=0.028 Sum_probs=52.2
Q ss_pred eeeeeeeCCcccceeEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceecccc-CCCceEEE
Q 020294 53 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYII 125 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-~~~~~~~v 125 (328)
...++.+|.|....+|++...+ ..+++|..... ....+..|.+.++.+.+. .+.+++..... ..+..+++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSP---YIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCC---CeeeeeeEEEccCCCeEEEE
Confidence 4567788999999999998743 47888887632 123466788887777542 23334432211 13467999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 80 ~e~~~~~~L 88 (287)
T cd06621 80 MEYCEGGSL 88 (287)
T ss_pred EEecCCCCH
Confidence 999999854
No 212
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.62 E-value=0.0021 Score=56.71 Aligned_cols=77 Identities=16% Similarity=0.053 Sum_probs=51.4
Q ss_pred eeeeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.-.+.++.|..+.+|++... +..+++|..... ....+..|.+.++.+.+. .+.+++..... .+..+++|||
T Consensus 6 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~-~~~~~l~~e~ 81 (262)
T cd06613 6 ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHP---NIVAYFGSYLR-RDKLWIVMEY 81 (262)
T ss_pred EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCC---ChhceEEEEEe-CCEEEEEEeC
Confidence 34567888889999998764 347888987642 234566777777777442 34444443322 4578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|..+
T Consensus 82 ~~~~~l 87 (262)
T cd06613 82 CGGGSL 87 (262)
T ss_pred CCCCcH
Confidence 999764
No 213
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.62 E-value=0.00071 Score=60.97 Aligned_cols=75 Identities=11% Similarity=0.020 Sum_probs=43.6
Q ss_pred eCCcccceeEEEEeC-Cc-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTD-AG-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
+|.|..+.+|++... ++ .+.+|...... ......|...++.+.....-.++.++..... .+..++||||++
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 80 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-PDKLCFILDLMN 80 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-CCeEEEEEecCC
Confidence 577888999998764 33 78888765321 1223344444555443211123333333222 467899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 81 ~~~L 84 (279)
T cd05633 81 GGDL 84 (279)
T ss_pred CCCH
Confidence 9864
No 214
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.62 E-value=0.00055 Score=64.17 Aligned_cols=71 Identities=11% Similarity=-0.038 Sum_probs=48.7
Q ss_pred eeeeeeCCcccceeEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 54 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
.-++.++.|....||+..... ..+++|+... .....|+.+++.+.+. .+++++..... .+..+++|+++.|
T Consensus 69 ~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~---~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~~~ 141 (357)
T PHA03209 69 TVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK---GTTLIEAMLLQNVNHP---SVIRMKDTLVS-GAITCMVLPHYSS 141 (357)
T ss_pred EEEEEecCCCCeEEEEEEECCCCceEEEEeCCc---cccHHHHHHHHhCCCC---CCcChhheEEe-CCeeEEEEEccCC
Confidence 345678999999999988653 3788898643 2234688888887642 35555544332 4577999999876
No 215
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.62 E-value=0.00075 Score=60.97 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=48.5
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
++.++.|..+.+|++... ++ .+.+|..... ....+..|+.+++.+.+. .++..+..... ....+++||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e 80 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR---FVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCC---CEeeeeeeecC-CCeEEEEEe
Confidence 456888999999998764 33 6778876431 112345688888877542 23333333322 357899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 81 ~~~~~~L 87 (285)
T cd05605 81 LMNGGDL 87 (285)
T ss_pred ccCCCcH
Confidence 9999864
No 216
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.61 E-value=0.0005 Score=61.33 Aligned_cols=75 Identities=15% Similarity=0.030 Sum_probs=50.0
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----C--------cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----G--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 120 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~--------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~ 120 (328)
.+.+|.|..+.+|+.... ++ .+++|..... . .+.+..|...++.+.+ -.+++++..... .+
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~ 81 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH---LNIVQYLGFETT-EE 81 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC---CCcceEEEEecc-CC
Confidence 456888999999998643 33 7888865421 0 1235567777777743 345666665443 46
Q ss_pred ceEEEEeeecCCCC
Q 020294 121 GSYIIMEFIEFGSS 134 (328)
Q Consensus 121 ~~~~v~e~l~G~~~ 134 (328)
..+++|||++|+++
T Consensus 82 ~~~lv~e~~~~~~L 95 (272)
T cd06629 82 YLSIFLEYVPGGSI 95 (272)
T ss_pred ceEEEEecCCCCcH
Confidence 78999999999853
No 217
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.60 E-value=0.00086 Score=60.32 Aligned_cols=78 Identities=24% Similarity=0.237 Sum_probs=49.9
Q ss_pred eeeeeeCCcccceeEEEEe-----CC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCce
Q 020294 54 TKICPVGGGCINLASRYGT-----DA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS 122 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~-----~~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~ 122 (328)
..++.++.|..+.+|.+.. .+ ..+++|..... ....+..|+++++.+.+. .+++++...... ....
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHE---NIVKYKGCCSEQGGKGL 83 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCC---CEeeEEEEEecCCCceE
Confidence 4466788888899987542 12 36888987642 134456788888877532 355555543221 2457
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||++|+.+
T Consensus 84 ~lv~e~~~~~~l 95 (283)
T cd05080 84 QLIMEYVPLGSL 95 (283)
T ss_pred EEEecCCCCCCH
Confidence 899999998754
No 218
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.60 E-value=0.0012 Score=59.44 Aligned_cols=76 Identities=16% Similarity=0.110 Sum_probs=48.0
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~ 124 (328)
++.+|.|..+.||++... ++ .+++|..... .......|.+.++.|.....-.+.+++...... ....++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 456888999999999764 34 6788876421 122355788888888643222355555433211 245789
Q ss_pred EEeeecC
Q 020294 125 IMEFIEF 131 (328)
Q Consensus 125 v~e~l~G 131 (328)
+||++++
T Consensus 85 v~e~~~~ 91 (288)
T cd07863 85 VFEHVDQ 91 (288)
T ss_pred EEccccc
Confidence 9999876
No 219
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.60 E-value=0.0011 Score=60.90 Aligned_cols=93 Identities=12% Similarity=0.040 Sum_probs=58.0
Q ss_pred ChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC---c---chHHHHHHHHHHHHhcCCCC
Q 020294 36 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG---P---SMFEGEALGLGAMYETRTIR 107 (328)
Q Consensus 36 ~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~---~---~~~~~E~~~l~~L~~~~~v~ 107 (328)
+++++..+........-......++.|..+.+|++... + ..+++|...... . ..+..|.+.++.+.+ ..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~ 82 (313)
T cd06633 6 KDPEIADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH---PN 82 (313)
T ss_pred CCHHHHHHhccCCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC---CC
Confidence 56667777655533323344566899999999998753 3 378888765321 1 234567777777743 23
Q ss_pred cccceeccccCCCceEEEEeeecCC
Q 020294 108 APRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 108 VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
+++++..... ....+++|||+.|.
T Consensus 83 iv~~~~~~~~-~~~~~lv~e~~~~~ 106 (313)
T cd06633 83 TIEYKGCYLK-EHTAWLVMEYCLGS 106 (313)
T ss_pred CccEEEEEEe-CCEEEEEEecCCCC
Confidence 4455544332 35789999999763
No 220
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.60 E-value=0.00089 Score=59.27 Aligned_cols=74 Identities=18% Similarity=0.021 Sum_probs=48.7
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.+.++.|....+|++... ...+++|..+.. ....+..|.+.++.+.+. .+.+++..... ....+++
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v 82 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHE---RIVQYYGCLRD-DETLSIF 82 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCC---CeeeeEEEEcc-CCeEEEE
Confidence 456788888899998753 247888876421 113456677777776432 34455554433 4588999
Q ss_pred EeeecCCC
Q 020294 126 MEFIEFGS 133 (328)
Q Consensus 126 ~e~l~G~~ 133 (328)
+|+++|+.
T Consensus 83 ~e~~~~~~ 90 (263)
T cd06625 83 MEYMPGGS 90 (263)
T ss_pred EEECCCCc
Confidence 99999875
No 221
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.60 E-value=0.00096 Score=59.89 Aligned_cols=72 Identities=19% Similarity=0.122 Sum_probs=49.2
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|..+.+|+.... + ..+++|..... ....+..|+..++.+.+ -.+++++..... ++..++||||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~ 80 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH---PNIVCLQDVLMQ-ESRLYLIFEF 80 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC---CCEeeeEEEEee-CCeEEEEEec
Confidence 566888889999999764 2 37888876421 12346678888887753 345555554332 4678999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
++|
T Consensus 81 ~~~ 83 (285)
T cd07861 81 LSM 83 (285)
T ss_pred CCC
Confidence 986
No 222
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.59 E-value=0.00067 Score=66.04 Aligned_cols=69 Identities=12% Similarity=-0.009 Sum_probs=48.8
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
...++.|..+.||+..... ..+++|.... ..+..|+++++.|.+. .|.+++..... .+..+++|++..|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~~L~Hp---nIv~l~~~~~~-~~~~~lv~e~~~~ 244 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLRRLSHP---AVLALLDVRVV-GGLTCLVLPKYRS 244 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHHHCCCC---CCCcEEEEEEE-CCEEEEEEEccCC
Confidence 4568889999999988754 3688886432 3356899999988642 45566655433 4678999998865
No 223
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.59 E-value=0.0013 Score=59.29 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=51.1
Q ss_pred eeeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 53 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
..-.+.+|.|....+|+....+ ..+++|...... ...+..|.++++.+.++ -.+-+++..... .+.
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~ 90 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGVCTQ-EGP 90 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEcC-CCC
Confidence 3445678889889999987531 257888776421 12355788888777443 233444444332 467
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++|||++|+.+
T Consensus 91 ~~li~e~~~~~~L 103 (293)
T cd05053 91 LYVVVEYAAHGNL 103 (293)
T ss_pred eEEEEEeCCCCcH
Confidence 8999999999864
No 224
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.59 E-value=0.00074 Score=59.57 Aligned_cols=76 Identities=16% Similarity=0.107 Sum_probs=47.7
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e 127 (328)
+..++.|..+.+|++... + ..+++|..... ....+..|++.++.+.+. .+.+++...... ....+++||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHP---NIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCC---ccceeeeeeecCCCCEEEEEeh
Confidence 355788888999998764 3 36888876421 123455677777777542 344444432221 346799999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 82 ~~~~~~L 88 (265)
T cd08217 82 YCEGGDL 88 (265)
T ss_pred hccCCCH
Confidence 9999854
No 225
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.58 E-value=0.00084 Score=60.23 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=49.3
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|..+.+|+.... + ..+++|...... ...+..|+..++.+.+ -.+++++..... ....++||||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~ 80 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH---PYVVKLLDVFPH-GSGFVLVMEY 80 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeeEEEecc
Confidence 345788899999998763 3 478889875321 3456778888887753 234555554332 4578999999
Q ss_pred ecCCC
Q 020294 129 IEFGS 133 (328)
Q Consensus 129 l~G~~ 133 (328)
+ |..
T Consensus 81 ~-~~~ 84 (286)
T cd07832 81 M-PSD 84 (286)
T ss_pred c-CCC
Confidence 9 765
No 226
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.57 E-value=0.00098 Score=59.39 Aligned_cols=73 Identities=14% Similarity=0.118 Sum_probs=45.5
Q ss_pred eeCCcccceeEEEEeCC----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.+|+....+ ..+++|...... ...+..|++.++.+.+ -.+.+++..... .+..+++|||+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~nii~~~~~~~~-~~~~~lv~e~~ 77 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH---PNVLQCLGQCIE-SIPYLLVLEFC 77 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC---CCcceEEEEECC-CCceEEEEEeC
Confidence 46888899999875432 257788654321 1234567776666533 234455544332 45789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 78 ~~g~L 82 (269)
T cd05042 78 PLGDL 82 (269)
T ss_pred CCCcH
Confidence 98753
No 227
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.57 E-value=0.0012 Score=58.48 Aligned_cols=75 Identities=11% Similarity=0.061 Sum_probs=50.3
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+.++.|..+.+|++... + ..+++|..... ....+..|++.++.+.+ ..+++++..... +...+++||++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~iv~e~~ 81 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH---PNVVKYYTSFVV-GDELWLVMPYL 81 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC---CCEEEEEEEEee-CCEEEEEEecc
Confidence 456788888999999864 3 37888887532 23456778887777743 234555543322 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|..+
T Consensus 82 ~~~~l 86 (267)
T cd06610 82 SGGSL 86 (267)
T ss_pred CCCcH
Confidence 99853
No 228
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.57 E-value=0.00078 Score=63.67 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=53.3
Q ss_pred eeeeeeeCCcccceeEEEEe---C---C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 53 ITKICPVGGGCINLASRYGT---D---A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~---~---~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
..-.+.+|.|..+.||++.. . + ..+.+|...... ...+..|+++++.+.++ -.+++++..... .+.
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h--~nIv~~~~~~~~-~~~ 116 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH--KNIVNLLGACTH-GGP 116 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccC--CceeeEeeEecC-CCC
Confidence 34456788899999998763 1 1 258888775321 23466788888888543 245666655433 467
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++|||++|+.+
T Consensus 117 ~~lv~ey~~~g~L 129 (374)
T cd05106 117 VLVITEYCCYGDL 129 (374)
T ss_pred eEEeHhhccCCcH
Confidence 8999999999865
No 229
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.57 E-value=0.00097 Score=59.23 Aligned_cols=73 Identities=14% Similarity=0.037 Sum_probs=48.6
Q ss_pred eeeCCcccceeEEEEeC--CccEEEEecCCCC------------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294 57 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG------------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~------------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~ 122 (328)
..++.|..+.+|+.... +..+++|...... ...+..|+.+++.+.+ -.+++++..... .+..
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~ 81 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH---ENIVQYLGSSLD-ADHL 81 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEe-CCcc
Confidence 35677888899998753 2478888664311 1345677887887754 235556555433 4688
Q ss_pred EEEEeeecCCC
Q 020294 123 YIIMEFIEFGS 133 (328)
Q Consensus 123 ~~v~e~l~G~~ 133 (328)
+++|||++|..
T Consensus 82 ~lv~e~~~~~~ 92 (267)
T cd06628 82 NIFLEYVPGGS 92 (267)
T ss_pred EEEEEecCCCC
Confidence 99999999875
No 230
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.57 E-value=0.00099 Score=59.58 Aligned_cols=78 Identities=18% Similarity=0.101 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
++.++.|..+.+|+.... + ..+++|..... ....+..|..+++.+.....-.+.+++..... ....+++|||+
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWIIMEYA 84 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEEEecC
Confidence 456788889999998753 3 47888976532 12346678888888864212234444443322 45789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|..+
T Consensus 85 ~~~~L 89 (277)
T cd06917 85 EGGSV 89 (277)
T ss_pred CCCcH
Confidence 99753
No 231
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.56 E-value=0.0015 Score=57.58 Aligned_cols=76 Identities=21% Similarity=0.118 Sum_probs=46.7
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|....+|++.... ..+++|..... ....+..|.+.++.+.+. .+.+++......++..+++|||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHP---NIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCC---CeeeeeeeecCCCCEEEEEecc
Confidence 4557788889999988643 37888876421 123455677777666432 2333333221113467899999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 82 ~~~~~l 87 (257)
T cd08223 82 CEGGDL 87 (257)
T ss_pred cCCCcH
Confidence 998753
No 232
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.56 E-value=0.001 Score=58.95 Aligned_cols=75 Identities=21% Similarity=0.152 Sum_probs=50.3
Q ss_pred eeeeCCcccceeEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
.+.++.|..+.+|++...++ .+++|...... ...+..|...++.+.+ -.+.+++..... ....+++|||++|
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~ 86 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRH---KHLISLFAVCSV-GEPVYIITELMEK 86 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCC---cchhheeeeEec-CCCeEEEEeeccc
Confidence 34567888899999876554 77788876422 3456777777777643 234455544433 4578999999999
Q ss_pred CCC
Q 020294 132 GSS 134 (328)
Q Consensus 132 ~~~ 134 (328)
+.+
T Consensus 87 ~~L 89 (261)
T cd05148 87 GSL 89 (261)
T ss_pred CCH
Confidence 754
No 233
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.55 E-value=0.00072 Score=63.30 Aligned_cols=75 Identities=15% Similarity=0.113 Sum_probs=46.3
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCce
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS 122 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~ 122 (328)
-++.+|.|..+.||++... . ..+++|..... ....+..|..+++.+.+. .+.+++...... ....
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~ 101 (359)
T cd07876 25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK---NIISLLNVFTPQKSLEEFQDV 101 (359)
T ss_pred EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCC---CEeeeeeeeccCCCcccccee
Confidence 3577899999999999764 2 37888986421 123455677777776532 233333322110 1346
Q ss_pred EEEEeeecCC
Q 020294 123 YIIMEFIEFG 132 (328)
Q Consensus 123 ~~v~e~l~G~ 132 (328)
+++|||++|.
T Consensus 102 ~lv~e~~~~~ 111 (359)
T cd07876 102 YLVMELMDAN 111 (359)
T ss_pred EEEEeCCCcC
Confidence 9999999874
No 234
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=97.55 E-value=0.00047 Score=62.78 Aligned_cols=148 Identities=20% Similarity=0.202 Sum_probs=85.1
Q ss_pred eeeeeeCCcccceeEEEEe-CCc-cEEEEecCC--C---CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294 54 TKICPVGGGCINLASRYGT-DAG-SFFVKTNRS--I---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 121 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~--~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~ 121 (328)
.+++.+|+|....||+... .+| -++||.-+- . .+....+|+.+|+.|.+... +-.++.+-... .+.
T Consensus 14 ~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~--iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 14 EKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANH--IVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcc--eEEEEeeeeecccccccce
Confidence 3567789999999999875 344 667776542 1 23445689999999987532 33333322111 246
Q ss_pred eEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCC
Q 020294 122 SYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 201 (328)
Q Consensus 122 ~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~ 201 (328)
-++|+||++-. +.+.+. ..+.+ ..|.+ . .. +
T Consensus 92 l~lvfe~~d~D--------L~~ymd---~~~~~--~~g~~----------------~---~~----i------------- 122 (323)
T KOG0594|consen 92 LYLVFEFLDRD--------LKKYMD---SLPKK--PQGLP----------------P---RL----I------------- 122 (323)
T ss_pred EEEEEEeeccc--------HHHHHH---hcccc--ccCCC----------------H---HH----H-------------
Confidence 67899987763 111111 11110 01110 0 00 1
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c-ccCCchh
Q 020294 202 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA 260 (328)
Q Consensus 202 ~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~-~~G~p~~ 260 (328)
+..+.+++..+. ++ ...+++|+||+|.|||++++|...|+||. + .++-|.-
T Consensus 123 ---k~~m~Qll~gl~-~~----H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~ 175 (323)
T KOG0594|consen 123 ---KSFMRQLLRGLA-FL----HSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR 175 (323)
T ss_pred ---HHHHHHHHHHHH-HH----HhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc
Confidence 112223333332 11 24589999999999999999989999985 3 4554444
No 235
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.55 E-value=0.00099 Score=59.19 Aligned_cols=76 Identities=13% Similarity=0.042 Sum_probs=51.7
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCceEEEE
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIM 126 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~~~v~ 126 (328)
++.++.|....+|++.... ..+++|..... ....+..|..+++.+.++ -.+++++...... ....+++|
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~lv~ 88 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPGNDDQLWLVM 88 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCCcceEEEEEE
Confidence 4667888888999988642 37888887642 234577888888888654 3455565543211 23579999
Q ss_pred eeecCCC
Q 020294 127 EFIEFGS 133 (328)
Q Consensus 127 e~l~G~~ 133 (328)
||++|+.
T Consensus 89 e~~~~~~ 95 (275)
T cd06608 89 ELCGGGS 95 (275)
T ss_pred EcCCCCc
Confidence 9999875
No 236
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.55 E-value=0.0013 Score=58.54 Aligned_cols=77 Identities=25% Similarity=0.121 Sum_probs=49.4
Q ss_pred eeeeeeCCcccceeEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 54 TKICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
.-.+.++.|..+.+|+..... ..+.+|...... ...+..|..+++.+.+ -.+.+++..... .+..++
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~i 82 (266)
T cd05033 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH---PNIIRLEGVVTK-SRPVMI 82 (266)
T ss_pred eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC---CCcceEeEEEec-CCceEE
Confidence 345678888899999986532 257788765321 2345567777776643 234445443322 457899
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
+||+++|+.+
T Consensus 83 v~e~~~~~~L 92 (266)
T cd05033 83 ITEYMENGSL 92 (266)
T ss_pred EEEcCCCCCH
Confidence 9999999753
No 237
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.54 E-value=0.001 Score=59.35 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=47.9
Q ss_pred eeCCcccceeEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.+|+....++ .+++|..+... ...+..|...++.+.+ -.+++++..... ....+++|||+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~ 77 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH---SNLLQCLGQCTE-VTPYLLVMEFC 77 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcC-CCCcEEEEECC
Confidence 467888899999875432 57888765321 1245567877777754 235555554432 35679999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 78 ~~g~L 82 (269)
T cd05087 78 PLGDL 82 (269)
T ss_pred CCCcH
Confidence 98753
No 238
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.53 E-value=0.00096 Score=59.40 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=24.3
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|+++.||++++++...++|+.
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEeccc
Confidence 469999999999999988888999975
No 239
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.52 E-value=0.0014 Score=58.78 Aligned_cols=76 Identities=16% Similarity=0.068 Sum_probs=50.8
Q ss_pred eeeeeCCcccceeEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.++.++.|..+.+|+.... +..+++|...... ...+..|++.++.+.+ -.+++++..... +...+++|||
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-GTKLWIIMEY 83 (277)
T ss_pred hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCEEEEEEec
Confidence 3556888888999998753 3478888865321 2345567777776643 245566655433 4678999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 84 ~~~~~L 89 (277)
T cd06640 84 LGGGSA 89 (277)
T ss_pred CCCCcH
Confidence 999864
No 240
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.52 E-value=0.0005 Score=60.67 Aligned_cols=72 Identities=11% Similarity=0.050 Sum_probs=46.4
Q ss_pred eCCcccceeEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~~--~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
++.|..+.+|++...+ ..+++|...... ...+..|.+.++.+.+ ..+++++..... ....+++|||++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 76 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS---PYVVKLYYSFQG-KKNLYLVMEYLP 76 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC---cchhHHHHheec-CcEEEEEEecCC
Confidence 3567778999998753 389999875421 2345566666666643 234444443322 457899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 77 ~~~L 80 (265)
T cd05579 77 GGDL 80 (265)
T ss_pred CCcH
Confidence 8753
No 241
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.52 E-value=0.0011 Score=59.13 Aligned_cols=75 Identities=19% Similarity=0.069 Sum_probs=48.4
Q ss_pred eeeeCCcccceeEEEEeC--Cc---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 56 ICPVGGGCINLASRYGTD--AG---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
.+.++.|..+.+|+.... ++ .+.+|...... ...+..|..+++.+.+ -.+.+++..... ++..+++|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~ 84 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SKPVMIVT 84 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCccEEEE
Confidence 456788888999997642 22 57888765321 2345667777777643 234555544332 46789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
|+++|+.+
T Consensus 85 e~~~~~~L 92 (267)
T cd05066 85 EYMENGSL 92 (267)
T ss_pred EcCCCCCH
Confidence 99999753
No 242
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.52 E-value=0.0011 Score=60.05 Aligned_cols=73 Identities=11% Similarity=-0.028 Sum_probs=46.5
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
++.++.|..+.+|+.... +..+++|...... ...+..|.+.++.+.+ -.+.+++..... ....++|
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv 80 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH---PNIIGLLDVFGH-KSNINLV 80 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC---CCChhhhheeec-CCEEEEE
Confidence 345788889999998753 3488999876421 1224457777776653 234444444332 4678999
Q ss_pred EeeecCCC
Q 020294 126 MEFIEFGS 133 (328)
Q Consensus 126 ~e~l~G~~ 133 (328)
|||+ ++.
T Consensus 81 ~e~~-~~~ 87 (298)
T cd07841 81 FEFM-ETD 87 (298)
T ss_pred Eccc-CCC
Confidence 9999 543
No 243
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.52 E-value=0.0012 Score=58.71 Aligned_cols=71 Identities=14% Similarity=0.074 Sum_probs=47.1
Q ss_pred eCCcccceeEEEEeC--C-c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTD--A-G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~--~-~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
++.|..+.+|+.... + + .+.+|+..... ...+..|+.+++.+.+ -.+.+++.... ....+++|||++
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h---~~ii~~~~~~~--~~~~~lv~e~~~ 77 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN---PYIVRMIGVCE--AEALMLVMEMAS 77 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC---CCeEEEEEEEc--CCCeEEEEEeCC
Confidence 678888999986532 2 3 57888876432 2346778888888754 23444554432 356799999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+++
T Consensus 78 ~~~L 81 (257)
T cd05115 78 GGPL 81 (257)
T ss_pred CCCH
Confidence 9764
No 244
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.52 E-value=0.0019 Score=58.37 Aligned_cols=75 Identities=19% Similarity=0.228 Sum_probs=49.1
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~ 124 (328)
.+.++.|..+.+|++... ++ .+++|..... ....+..|...++.+.++ -.+++++...... ....++
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~~~~~~l 83 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES--IYIVRLLDVEHVEEKNGKPSLYL 83 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCC--CCccceeeeEeecCCCCCceEEE
Confidence 456788888999998864 33 7889986531 123466788888888653 2355555443321 123699
Q ss_pred EEeeecCC
Q 020294 125 IMEFIEFG 132 (328)
Q Consensus 125 v~e~l~G~ 132 (328)
+|||++|.
T Consensus 84 v~e~~~~~ 91 (295)
T cd07837 84 VFEYLDSD 91 (295)
T ss_pred EeeccCcC
Confidence 99999873
No 245
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.52 E-value=0.0009 Score=63.61 Aligned_cols=72 Identities=8% Similarity=-0.069 Sum_probs=48.3
Q ss_pred eeeeeeCCcccceeEEEEeCC----ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 54 TKICPVGGGCINLASRYGTDA----GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.-++.++.|....||+....+ ..+++|..... .....|+++++.|.+. .+.+++..... .+..+++|++.
T Consensus 95 ~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~ 168 (392)
T PHA03207 95 NILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTISHR---AIINLIHAYRW-KSTVCMVMPKY 168 (392)
T ss_pred EEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhcCCC---CccceeeeEee-CCEEEEEehhc
Confidence 345678999999999986432 26778876532 3356899999888642 34455544332 45789999987
Q ss_pred cC
Q 020294 130 EF 131 (328)
Q Consensus 130 ~G 131 (328)
.+
T Consensus 169 ~~ 170 (392)
T PHA03207 169 KC 170 (392)
T ss_pred CC
Confidence 65
No 246
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.51 E-value=0.00079 Score=60.41 Aligned_cols=72 Identities=14% Similarity=0.060 Sum_probs=45.3
Q ss_pred eCCcccceeEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
++.|..+.+|++... ++ .+.+|..... ....+..|.++++.+.. -.+++.+..... .+..+++|||++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~ 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS---RFIVSLAYAFET-KDDLCLVMTLMN 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC---CCEeeeeeEEec-CCeEEEEEecCC
Confidence 466788899998754 33 7888877531 12334568888877753 123333333222 467899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 77 ~~~L 80 (277)
T cd05577 77 GGDL 80 (277)
T ss_pred CCcH
Confidence 8753
No 247
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.51 E-value=0.00029 Score=62.93 Aligned_cols=76 Identities=11% Similarity=0.022 Sum_probs=50.6
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.++.|..+.+|++... + ..+++|+.... ....+..|.++++.+.++ -.+++++..... .+..+++||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~lv~e 82 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH--PGIIKLYYTFQD-EENLYFVLE 82 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccC--CCchhHHHHhcC-CceEEEEEc
Confidence 346788888999998864 3 37888987531 123456677777777532 235555544332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
+++|+.+
T Consensus 83 ~~~~~~L 89 (280)
T cd05581 83 YAPNGEL 89 (280)
T ss_pred CCCCCcH
Confidence 9988754
No 248
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.51 E-value=0.0012 Score=59.22 Aligned_cols=75 Identities=13% Similarity=0.102 Sum_probs=51.2
Q ss_pred eeeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
-++.++.|....+|++...+ ..+++|..... ....+..|.+.++.+.+ -.+++++..... ++..+++||
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e 80 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH---ENLVNLIEVFRR-KKRLYLVFE 80 (286)
T ss_pred EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC---cchhhHHHhccc-CCeEEEEEe
Confidence 35678889999999988753 37888876421 12345678888777754 245555555433 467899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
|++|+.
T Consensus 81 ~~~~~~ 86 (286)
T cd07846 81 FVDHTV 86 (286)
T ss_pred cCCccH
Confidence 999864
No 249
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.51 E-value=0.0018 Score=57.60 Aligned_cols=77 Identities=19% Similarity=0.069 Sum_probs=50.2
Q ss_pred eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.-++.++.|..+.+|+.... ++ .+++|+.... ....+..|+..++.+.+. .+++++..... .+..+++|||
T Consensus 12 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~---~ii~~~~~~~~-~~~~~iv~e~ 87 (267)
T cd06646 12 ELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHC---NIVAYFGSYLS-REKLWICMEY 87 (267)
T ss_pred chhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCC---CeeeeeEEEEe-CCEEEEEEeC
Confidence 33566788888999998753 33 6788887532 223466777777766432 34444444332 4678999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 88 ~~~~~L 93 (267)
T cd06646 88 CGGGSL 93 (267)
T ss_pred CCCCcH
Confidence 998753
No 250
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.51 E-value=0.0012 Score=64.13 Aligned_cols=131 Identities=19% Similarity=0.137 Sum_probs=88.1
Q ss_pred eeCCcccceeEEEEe-CCc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGT-DAG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~-~~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
-+|.|....+|+++. +.| .|.+|+-+. ...+.+..|+++++.|.+. .|-+.+.+-++ ....|+++|.+
T Consensus 25 ~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~Hp---nIV~f~~~FED-s~nVYivLELC 100 (592)
T KOG0575|consen 25 FLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHP---NIVQFYHFFED-SNNVYIVLELC 100 (592)
T ss_pred eeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCC---cEEeeeeEeec-CCceEEEEEec
Confidence 468899999999987 655 788888753 2467788999999988753 35555554333 46889999999
Q ss_pred cCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHH
Q 020294 130 EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH 209 (328)
Q Consensus 130 ~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 209 (328)
+-+. |.++|+.-.+ + . +.- .. -.+.
T Consensus 101 ~~~s-----------L~el~Krrk~---l--t---------------EpE--------ar----------------y~l~ 125 (592)
T KOG0575|consen 101 HRGS-----------LMELLKRRKP---L--T---------------EPE--------AR----------------YFLR 125 (592)
T ss_pred CCcc-----------HHHHHHhcCC---C--C---------------cHH--------HH----------------HHHH
Confidence 8875 6777773321 0 0 000 01 1122
Q ss_pred HHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 210 RLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 210 ~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
+++..+.. +- ...++|+||+.||++++++-.+.|=||.
T Consensus 126 QIv~GlkY-LH----~~~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 126 QIVEGLKY-LH----SLGIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred HHHHHHHH-HH----hcCceecccchhheeecCcCcEEecccc
Confidence 33333332 22 3469999999999999888678898874
No 251
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=97.51 E-value=0.00077 Score=63.75 Aligned_cols=185 Identities=16% Similarity=0.116 Sum_probs=107.8
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceec---cccC---CCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV---GALP---TGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~---~~~~---~~~~~~v~e~l 129 (328)
++-++.|-...||+-+..+..+.||+++......+..|.++++.. +..-|.++.+ +... .-..++|++|-
T Consensus 215 ~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp----~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP----GMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred HHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhcc----CccchhHHHhhchhccCCccccceeEEeeec
Confidence 344578899999999999889999999876666777787766544 3344444433 1111 12568888886
Q ss_pred cCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHH
Q 020294 130 EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH 209 (328)
Q Consensus 130 ~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 209 (328)
+-+.+ -+.|.. | . -+|.+. -++..-+. +-+.
T Consensus 291 ~kGsL-------~dyL~~-n---------------t-----------isw~~~---cria~Sma------------rGLa 321 (534)
T KOG3653|consen 291 PKGSL-------CDYLKA-N---------------T-----------ISWNSL---CRIAESMA------------RGLA 321 (534)
T ss_pred cCCcH-------HHHHHh-c---------------c-----------ccHHHH---HHHHHHHH------------HHHH
Confidence 66542 111110 0 0 134321 12221110 0111
Q ss_pred HHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c---ccCCchhhhhh-h-hhcCCChhhHHHHhhhCC
Q 020294 210 RLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C---YYGHNEAEFGM-S-WCAGFGGSFYNSYFEVMP 283 (328)
Q Consensus 210 ~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~---~~G~p~~DLa~-~-~~~~~~~~f~~~Y~~~~p 283 (328)
.+-+-++ ..+ ..+|++.|+||++.|||+.+|....|-||. + ..|-+.-|..- . ....+.++.+|+--....
T Consensus 322 ~LHee~p--~~d-~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d 398 (534)
T KOG3653|consen 322 HLHEELP--RGD-HHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQD 398 (534)
T ss_pred HhcccCC--cCC-CCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccccc
Confidence 1222122 222 468899999999999999888877899974 3 24555555542 1 112244677776554432
Q ss_pred CCCCHHHHHHHHHHH
Q 020294 284 KQPGFEKRRDLYMLY 298 (328)
Q Consensus 284 l~~~~~~r~~ly~l~ 298 (328)
+.--.|+++|.+.
T Consensus 399 --~~Afkr~DvYamg 411 (534)
T KOG3653|consen 399 --RDAFKRIDVYAMG 411 (534)
T ss_pred --HHHHHHHHHHHHH
Confidence 4456889999754
No 252
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.51 E-value=0.0022 Score=57.63 Aligned_cols=75 Identities=13% Similarity=0.083 Sum_probs=49.8
Q ss_pred eeeeCCcccceeEEEEe---C--C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 56 ICPVGGGCINLASRYGT---D--A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~---~--~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.+.++.|..+.+|+... + + ..+.+|...... ...+..|++.++.+.+ -.+++++..... ....+++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv 85 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH---PNIVCLLGVVTQ-EQPVCML 85 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC---CCeeeEEEEEec-CCceEEE
Confidence 46688888899999763 1 2 267778775321 2346678888888754 235555554332 3578999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++++++
T Consensus 86 ~e~~~~~~L 94 (283)
T cd05090 86 FEYLNQGDL 94 (283)
T ss_pred EEcCCCCcH
Confidence 999998754
No 253
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.51 E-value=0.0013 Score=61.81 Aligned_cols=75 Identities=13% Similarity=0.129 Sum_probs=45.8
Q ss_pred eeeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc----C-CCce
Q 020294 55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----P-TGGS 122 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~-~~~~ 122 (328)
-++.+|.|..+.||++... +..+++|..... ....+..|...++.+.+. .+.+++..... . ....
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~ii~~~~~~~~~~~~~~~~~~ 104 (364)
T cd07875 28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIIGLLNVFTPQKSLEEFQDV 104 (364)
T ss_pred EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCC---CccccceeecccccccccCeE
Confidence 3567889999999998754 337888876531 123455677777777542 22223322111 0 2357
Q ss_pred EEEEeeecCC
Q 020294 123 YIIMEFIEFG 132 (328)
Q Consensus 123 ~~v~e~l~G~ 132 (328)
++||||+++.
T Consensus 105 ~lv~e~~~~~ 114 (364)
T cd07875 105 YIVMELMDAN 114 (364)
T ss_pred EEEEeCCCCC
Confidence 9999999874
No 254
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.51 E-value=0.00087 Score=59.44 Aligned_cols=72 Identities=14% Similarity=0.050 Sum_probs=47.3
Q ss_pred eCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
+|.|..+.+|++... +..+++|..... ....+..|...++.+.+ -.+++++..... +...++++||.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 76 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH---PFIVKLYRTFKD-KKYIYMLMEYCL 76 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC---CCEeeeeeeEEc-CCccEEEEecCC
Confidence 456777899998875 448889987531 12446678877777743 234444443322 457899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 77 ~~~L 80 (262)
T cd05572 77 GGEL 80 (262)
T ss_pred CCcH
Confidence 8753
No 255
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.50 E-value=0.001 Score=60.00 Aligned_cols=74 Identities=14% Similarity=0.081 Sum_probs=50.6
Q ss_pred eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
..++.++.|..+.+|+.... + ..|++|..... ....+..|.++++.+.+. .+.+++.+... ....++|||
T Consensus 8 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07844 8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHA---NIVTLHDIIHT-KKTLTLVFE 83 (291)
T ss_pred eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCc---ceeeEEEEEec-CCeEEEEEe
Confidence 44577888999999998764 3 37899986532 123355788888888542 35555554432 467899999
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
|++|
T Consensus 84 ~~~~ 87 (291)
T cd07844 84 YLDT 87 (291)
T ss_pred cCCC
Confidence 9976
No 256
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.50 E-value=0.0016 Score=58.96 Aligned_cols=74 Identities=19% Similarity=0.124 Sum_probs=50.5
Q ss_pred eeeCCcccceeEEEEeCC-------------c---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccc
Q 020294 57 CPVGGGCINLASRYGTDA-------------G---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGA 116 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~-------------~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~ 116 (328)
+.++.|....+|++...+ + .+++|..+... ...+..|.+.++.+.+ -.+++++....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~ 87 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN---PNIIRLLGVCV 87 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEc
Confidence 558888889999876432 1 37888876421 2346678888887754 34566665543
Q ss_pred cCCCceEEEEeeecCCCC
Q 020294 117 LPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 117 ~~~~~~~~v~e~l~G~~~ 134 (328)
. .+..+++|||++|..+
T Consensus 88 ~-~~~~~lv~e~~~~~~L 104 (295)
T cd05097 88 S-DDPLCMITEYMENGDL 104 (295)
T ss_pred C-CCccEEEEecCCCCcH
Confidence 3 4678999999999864
No 257
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.50 E-value=0.0018 Score=58.42 Aligned_cols=75 Identities=12% Similarity=0.027 Sum_probs=50.3
Q ss_pred eeeeeeCCcccceeEEEEeC--CccEEEEecCCC---C-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.-++.++.|..+.+|+.... ++.+++|..... . ...+..|++.++.+.+ ..+++++..... .+..+++||
T Consensus 8 ~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07870 8 LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH---ANIVLLHDIIHT-KETLTFVFE 83 (291)
T ss_pred EEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC---CCEeEEEEEEec-CCeEEEEEe
Confidence 34667888899999998653 448999987532 1 2245678888887753 235555554433 457899999
Q ss_pred eecCC
Q 020294 128 FIEFG 132 (328)
Q Consensus 128 ~l~G~ 132 (328)
|+++.
T Consensus 84 ~~~~~ 88 (291)
T cd07870 84 YMHTD 88 (291)
T ss_pred cccCC
Confidence 99753
No 258
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.49 E-value=0.0021 Score=57.33 Aligned_cols=78 Identities=17% Similarity=0.205 Sum_probs=52.9
Q ss_pred eeeeeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 53 ITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
...++.+|.|..+.+|+.... ...+++|...... ...+..|.++++.+.+. .+++++..... .+.
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~ 82 (275)
T cd05046 7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHK---NVVRLLGLCRE-AEP 82 (275)
T ss_pred ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCc---ceeeeEEEECC-CCc
Confidence 345667888999999998752 2357888775422 23567888888888542 34556654432 457
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++|||++|+.+
T Consensus 83 ~~lv~e~~~~~~L 95 (275)
T cd05046 83 HYMILEYTDLGDL 95 (275)
T ss_pred ceEEEEecCCCcH
Confidence 8999999998753
No 259
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.49 E-value=0.0008 Score=59.47 Aligned_cols=75 Identities=15% Similarity=0.129 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+.++.|....+|+++..+ ..+++|...... ...+..|...+..+.+ -.+++++..... .+..+++|||+
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES---PYVVKCYGAFYK-EGEISIVLEYM 81 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEcc-CCeEEEEEEec
Confidence 4667778888999987753 478889876432 3456677777777753 235555544332 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|..+
T Consensus 82 ~~~~L 86 (264)
T cd06623 82 DGGSL 86 (264)
T ss_pred CCCcH
Confidence 98753
No 260
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.49 E-value=0.00079 Score=59.66 Aligned_cols=75 Identities=20% Similarity=0.047 Sum_probs=47.7
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
++.++.|....+|++... +..+++|...... ...+..|++.++.+.+ -.+++++..... .+..++++|++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNS---PYIVGFYGAFYN-NGDISICMEYM 81 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCC---Cchhhhheeeec-CCEEEEEEEec
Confidence 445778888899999875 3368888765321 2335567766666642 234444443322 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|..+
T Consensus 82 ~~~~L 86 (265)
T cd06605 82 DGGSL 86 (265)
T ss_pred CCCcH
Confidence 98753
No 261
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.49 E-value=0.0013 Score=62.86 Aligned_cols=79 Identities=14% Similarity=0.096 Sum_probs=53.9
Q ss_pred eeeeeeeCCcccceeEEEEeC---C----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 53 ITKICPVGGGCINLASRYGTD---A----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~---~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
..-.+.+|.|..+.||+.+.. . ..+.+|...... ...+..|+++++.+..+ -.+++++..... .+.
T Consensus 39 ~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H--pnIv~l~~~~~~-~~~ 115 (400)
T cd05105 39 LVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH--LNIVNLLGACTK-SGP 115 (400)
T ss_pred eehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC--CCeeeEEEEEcc-CCc
Confidence 344567888999999987631 1 147888775321 24566788888888543 246666665543 467
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++|||++|+.+
T Consensus 116 ~~lv~Ey~~~g~L 128 (400)
T cd05105 116 IYIITEYCFYGDL 128 (400)
T ss_pred eEEEEEecCCCcH
Confidence 8999999999875
No 262
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.48 E-value=0.0011 Score=58.31 Aligned_cols=75 Identities=13% Similarity=0.010 Sum_probs=51.1
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
.+.++.|....+|++...+ ..+++|..+.. ....+..|.+.++.+.+ ..+++++..... ....++++|+++|.
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~ 83 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDS---PYIVKYYGSYFK-NTDLWIVMEYCGAG 83 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCC---CcEeeeeeeeec-CCcEEEEEecCCCC
Confidence 3457778888999987653 47888987642 24567788888888733 234455544332 46789999999987
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 84 ~L 85 (256)
T cd06612 84 SV 85 (256)
T ss_pred cH
Confidence 53
No 263
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.48 E-value=0.0017 Score=57.01 Aligned_cols=74 Identities=16% Similarity=0.044 Sum_probs=50.2
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|....+|+..... ..+++|...... ...+..|++.+..+.+. .+++++..... .+..+++|++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~ 80 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHP---NIVKYIGSIET-SDSLYIILEY 80 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCC---CccEEEEEEEe-CCEEEEEEec
Confidence 4678888999999987642 378899876432 23466777777777532 34445544332 4678999999
Q ss_pred ecCCC
Q 020294 129 IEFGS 133 (328)
Q Consensus 129 l~G~~ 133 (328)
++|..
T Consensus 81 ~~~~~ 85 (254)
T cd06627 81 AENGS 85 (254)
T ss_pred CCCCc
Confidence 99874
No 264
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=97.48 E-value=0.0015 Score=57.27 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=46.8
Q ss_pred eCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
+|.|....+|++... +..+++|..... ....+..|...++.+.+ ..+++++..... ++..+++|||++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~ 76 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH---PFIVKLHYAFQT-EEKLYLVLEYAP 76 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC---CcHHHHHHHeec-CCeeEEEEecCC
Confidence 466778899998764 347888987532 12356677777777753 234445443322 467899999998
Q ss_pred CCC
Q 020294 131 FGS 133 (328)
Q Consensus 131 G~~ 133 (328)
|..
T Consensus 77 ~~~ 79 (250)
T cd05123 77 GGE 79 (250)
T ss_pred CCc
Confidence 875
No 265
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.48 E-value=0.0018 Score=57.64 Aligned_cols=76 Identities=24% Similarity=0.124 Sum_probs=49.5
Q ss_pred eeeeeCCcccceeEEEEeC-Cc----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 55 KICPVGGGCINLASRYGTD-AG----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
-.+.++.|..+.+|+.... ++ .+.+|..... . ...+..|...++.+.+ -.+.+++..... ++..+++
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv 83 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SRPVMII 83 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---cCcceEEEEECC-CCceEEE
Confidence 3556788899999998753 22 4889987542 1 2346677777776643 234555544332 4577999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 84 ~e~~~~~~L 92 (269)
T cd05065 84 TEFMENGAL 92 (269)
T ss_pred EecCCCCcH
Confidence 999998753
No 266
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.48 E-value=0.0012 Score=59.96 Aligned_cols=76 Identities=17% Similarity=0.091 Sum_probs=50.9
Q ss_pred eeeeeCCcccceeEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccce
Q 020294 55 KICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPF 112 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-----------------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~ 112 (328)
-.+.++.|..+.+|++...+ + .+.+|...... ...+..|++.++.+.+ ..+++++
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~ 85 (296)
T cd05095 9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD---PNIIRLL 85 (296)
T ss_pred eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcceEE
Confidence 35668899999999874321 1 46778775321 2456778888888754 3455666
Q ss_pred eccccCCCceEEEEeeecCCCC
Q 020294 113 KVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 113 ~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
..... .+..+++|||++|+.+
T Consensus 86 ~~~~~-~~~~~lv~e~~~~~~L 106 (296)
T cd05095 86 AVCIT-SDPLCMITEYMENGDL 106 (296)
T ss_pred EEEec-CCccEEEEEeCCCCcH
Confidence 55433 4578999999998754
No 267
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.47 E-value=0.0015 Score=58.34 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=47.2
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|..+.+|++... ++ .+++|...... ...+..|.+.++.+.+ -.+.+++..... ....++++||
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~ 79 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH---PNIIKLLDVFRH-KGDLYLVFEF 79 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC---CCcchHHHhhcc-CCCEEEEEec
Confidence 456788888999998764 33 78888765321 2345678888877753 234444443322 3578999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
.++
T Consensus 80 ~~~ 82 (283)
T cd05118 80 MDT 82 (283)
T ss_pred cCC
Confidence 876
No 268
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.47 E-value=0.0011 Score=59.26 Aligned_cols=74 Identities=15% Similarity=0.020 Sum_probs=48.4
Q ss_pred eeeCCcccceeEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 57 CPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
..++.|..+.+|+....+ ..+++|...... ...+..|.++++.+.+. .+.+++..... +...++++|+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~~v~e~~~ 82 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSP---YITKYYGSFLK-GSKLWIIMEYCG 82 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCC---CeeeeeEEEEE-CCeEEEEEEeeC
Confidence 446778889999987642 378889875321 23466788888877632 23334433222 357899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 83 ~~~L 86 (274)
T cd06609 83 GGSC 86 (274)
T ss_pred CCcH
Confidence 9754
No 269
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.47 E-value=0.002 Score=58.85 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=47.2
Q ss_pred eeeCCcccceeEEEEeCC----ccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceecccc-CCCceEEEEeeec
Q 020294 57 CPVGGGCINLASRYGTDA----GSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYIIMEFIE 130 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-~~~~~~~v~e~l~ 130 (328)
..+|.|..+.||++...+ ..+++|..... ....+..|+++++.+.+. .+.+++..... .+...+++|||.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHP---NVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCC---CeeeEEEEEeccCCCeEEEEEeeeC
Confidence 358889999999998543 26888876542 233466788888887642 23333332211 1356799999988
Q ss_pred CC
Q 020294 131 FG 132 (328)
Q Consensus 131 G~ 132 (328)
+.
T Consensus 84 ~~ 85 (317)
T cd07867 84 HD 85 (317)
T ss_pred Cc
Confidence 63
No 270
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.46 E-value=0.00049 Score=63.55 Aligned_cols=73 Identities=12% Similarity=0.098 Sum_probs=45.1
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~ 124 (328)
.+.++.|..+.||++... + ..+++|..... ....+..|+++++.+.+. .+.+++...... ....++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHP---DIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCC---CEeeecceEeccCCCCCceEEE
Confidence 456788899999998754 3 37888975421 123466788888877542 222333221110 134799
Q ss_pred EEeeecC
Q 020294 125 IMEFIEF 131 (328)
Q Consensus 125 v~e~l~G 131 (328)
+|||+++
T Consensus 82 v~e~~~~ 88 (338)
T cd07859 82 VFELMES 88 (338)
T ss_pred EEecCCC
Confidence 9999865
No 271
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.46 E-value=0.002 Score=56.97 Aligned_cols=75 Identities=19% Similarity=0.105 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|..+.+|+.... +..+++|..... ....+..|...++.+.+ -.+.+++..... .+..++++||
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~lv~e~ 80 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVH-REKVYIFMEY 80 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC---CChhheeeeEec-CCEEEEEEec
Confidence 356888999999998764 347888886532 12346678887777754 234555544332 4578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|..+
T Consensus 81 ~~~~~L 86 (264)
T cd06626 81 CSGGTL 86 (264)
T ss_pred CCCCcH
Confidence 998754
No 272
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.46 E-value=0.00074 Score=60.71 Aligned_cols=76 Identities=14% Similarity=-0.124 Sum_probs=49.3
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
-++.++.|..+.+|++... + ..+++|..... . ...+..|.++++.+.+ -.+.+++..... ++..+++|||
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 80 (279)
T cd06619 5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS---PYIIGFYGAFFV-ENRISICTEF 80 (279)
T ss_pred heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC---CCeeeEEEEEEE-CCEEEEEEec
Confidence 3567888888999998753 3 47888886532 1 2335567777766643 234445544332 4678999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 81 ~~~~~l 86 (279)
T cd06619 81 MDGGSL 86 (279)
T ss_pred CCCCCh
Confidence 999754
No 273
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.46 E-value=0.0016 Score=57.09 Aligned_cols=75 Identities=17% Similarity=0.080 Sum_probs=49.6
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e 127 (328)
.+.++.|....+|+.... +..+++|...... ...+..|++.++.+.+ -.+.+++...... ....++++|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH---PNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC---CCEeeEEEEEecCCCCeEEEEEE
Confidence 456778888899998875 3378888875432 3456778887777753 2344444443321 157899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
+++|..
T Consensus 82 ~~~~~~ 87 (260)
T cd06606 82 YVSGGS 87 (260)
T ss_pred ecCCCc
Confidence 998864
No 274
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.46 E-value=0.002 Score=58.76 Aligned_cols=79 Identities=13% Similarity=0.084 Sum_probs=52.1
Q ss_pred eeeeeeeCCcccceeEEEEeC------C-ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 53 ITKICPVGGGCINLASRYGTD------A-GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~------~-~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
..-.+.++.|..+.+|+.+.. . ..+.+|..... . ...+..|.++++.+.++ -.+.+++..... .+.
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~ 113 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH--ENIVNLLGACTI-GGP 113 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCC--CCcceEEEEEec-CCc
Confidence 334556788888999988631 1 25778876532 1 23467788888888543 245555554432 467
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++|||++|+.+
T Consensus 114 ~~lv~e~~~~~~L 126 (302)
T cd05055 114 ILVITEYCCYGDL 126 (302)
T ss_pred eEEEEEcCCCCcH
Confidence 8999999998754
No 275
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.46 E-value=0.00063 Score=60.28 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=44.8
Q ss_pred eeeCCcccceeEEEEeC-C-ccEEEEecCCCC---cc---hHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 57 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIG---PS---MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~---~~---~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++++.|..+.+|+.... + ..+++|..+... .. .+..|...+....+ ...+++++..... .+..++++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~i~~~~~~~~~-~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGE--SPYVAKLYYSFQS-KDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCC--CCCeeeeeeeEEc-CCeEEEEEec
Confidence 46788888999998763 3 478889875321 11 12233333322222 2345555544432 4578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 79 ~~~~~L 84 (260)
T cd05611 79 LNGGDC 84 (260)
T ss_pred cCCCCH
Confidence 999864
No 276
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.46 E-value=0.0027 Score=56.89 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=49.6
Q ss_pred ceeeeeeeCCcccceeEEEEe-CCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 52 HITKICPVGGGCINLASRYGT-DAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~-~~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
...-++.++.|..+.+|+.+. .++ .+.+|...... ...+..|...++.+.+ -.+++++.... ...
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~--~~~ 82 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS---PYVCRLLGICL--TST 82 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC---CCCceEEEEEc--CCC
Confidence 455677889999999999874 333 36788875322 2234556666555532 23555555443 345
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.++++++++++.+
T Consensus 83 ~~l~~~~~~~g~l 95 (279)
T cd05109 83 VQLVTQLMPYGCL 95 (279)
T ss_pred cEEEEEcCCCCCH
Confidence 7899999998753
No 277
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.46 E-value=0.0024 Score=57.64 Aligned_cols=79 Identities=13% Similarity=0.149 Sum_probs=51.6
Q ss_pred ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
.......++.|..+.+|+.... + ..+++|..... ....+..|...++.+.+ -.+.+++..... .+..++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h---~~vv~~~~~~~~-~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH---PNIVEMYSSYLV-GDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC---CChheEEEEEEc-CCeEEEEE
Confidence 4556778999999999998753 3 37888876421 12335567777776643 234445543322 46789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
|+++|..+
T Consensus 96 e~~~~~~L 103 (285)
T cd06648 96 EFLEGGAL 103 (285)
T ss_pred eccCCCCH
Confidence 99998753
No 278
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.46 E-value=0.0025 Score=57.14 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=51.3
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.++.++.|..+.+|+.... ++ .+++|..... ....+..|+..++.+.+ -.+++++..... .+..+++|||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~ 79 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH---ENIVRLHDVIHT-ENKLMLVFEY 79 (284)
T ss_pred EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC---CCEeeeeeeEee-CCcEEEEEec
Confidence 4667888889999998864 34 6888876532 23445678888888853 346666665443 4678999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
++|
T Consensus 80 ~~~ 82 (284)
T cd07836 80 MDK 82 (284)
T ss_pred CCc
Confidence 986
No 279
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.46 E-value=0.00085 Score=60.22 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=49.8
Q ss_pred eeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294 54 TKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~ 122 (328)
.-++.++.|....||+..... ..+.+|...... ...+..|...+..+.+ -.+.+++..... .+..
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~~-~~~~ 83 (283)
T cd05048 8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH---PNIVCLLGVCTK-EQPT 83 (283)
T ss_pred chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC---cccceEEEEEcC-CCce
Confidence 346678888889999987532 257888765321 2346678877777643 234445544332 4678
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||.+|+.+
T Consensus 84 ~~~~e~~~~~~L 95 (283)
T cd05048 84 CMLFEYLAHGDL 95 (283)
T ss_pred EEEEecCCCCcH
Confidence 999999998753
No 280
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.46 E-value=0.0013 Score=58.69 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=48.3
Q ss_pred eeCCcccceeEEEEeCC-c---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDA-G---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~-~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.++.|..+.+|++...+ + .+.+|..... ....+..|.+.++.+..+. .+.+++..... .+..+++|||+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~--~iv~~~~~~~~-~~~~~lv~e~~ 78 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP--NIINLLGACEH-RGYLYLAIEYA 78 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCC--CeeeEEEEEec-CCCceEEEEeC
Confidence 36778889999987643 3 3456665421 1235667888888886542 34455554433 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+++
T Consensus 79 ~~~~L 83 (270)
T cd05047 79 PHGNL 83 (270)
T ss_pred CCCcH
Confidence 98754
No 281
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.45 E-value=0.0017 Score=59.21 Aligned_cols=90 Identities=11% Similarity=-0.011 Sum_probs=52.5
Q ss_pred HHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCccc
Q 020294 39 PIREWILSEGKATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPR 110 (328)
Q Consensus 39 ~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~ 110 (328)
++.+.+....+...-...+.++.|..+.+|++... +..+++|..... . ...+..|.+.++.+.+. .+.+
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~ 79 (307)
T cd06607 3 EIAELFSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHP---NTIE 79 (307)
T ss_pred hHHHhhcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCC---CEEE
Confidence 34444443322212234566888999999998764 337888876421 1 12355677777776432 2333
Q ss_pred ceeccccCCCceEEEEeeecCC
Q 020294 111 PFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 111 ~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
++..... .+..+++|||++|.
T Consensus 80 ~~~~~~~-~~~~~lv~e~~~g~ 100 (307)
T cd06607 80 YKGCYLR-EHTAWLVMEYCLGS 100 (307)
T ss_pred EEEEEEe-CCeEEEEHHhhCCC
Confidence 3333222 45789999999874
No 282
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.45 E-value=0.0053 Score=55.82 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=51.2
Q ss_pred eeeeeeeCCcccceeEEEEe-C-CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 53 ITKICPVGGGCINLASRYGT-D-AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~-~-~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
-.-++.++.|..+.+|+... . +..+++|..... ....+..|...++.+.+. .+++++..... ....++++|
T Consensus 21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e 96 (296)
T cd06655 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNP---NIVNFLDSFLV-GDELFVVME 96 (296)
T ss_pred EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCC---ceeeeeeeEec-CceEEEEEE
Confidence 45567788899999999764 2 347888876532 234566788887777542 24444443222 457899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
|++|+.
T Consensus 97 ~~~~~~ 102 (296)
T cd06655 97 YLAGGS 102 (296)
T ss_pred ecCCCc
Confidence 999975
No 283
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.45 E-value=0.0012 Score=62.70 Aligned_cols=75 Identities=16% Similarity=0.152 Sum_probs=50.6
Q ss_pred eeeeCCcccceeEEEEe--CCccEEEEecCCC-----------------CcchHHHHHHHHHHHHhcCCCCcccceeccc
Q 020294 56 ICPVGGGCINLASRYGT--DAGSFFVKTNRSI-----------------GPSMFEGEALGLGAMYETRTIRAPRPFKVGA 116 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~-----------------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~ 116 (328)
...+|.|+...|=.... ++.-|.+|+-+.. ..+.+.+|+++|+.|.+ ..|-+++.+-.
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H---~nVV~LiEvLD 178 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH---PNVVKLIEVLD 178 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC---cCeeEEEEeec
Confidence 34577787776544432 2336778876431 11467899999999976 46777776654
Q ss_pred cC-CCceEEEEeeecCCC
Q 020294 117 LP-TGGSYIIMEFIEFGS 133 (328)
Q Consensus 117 ~~-~~~~~~v~e~l~G~~ 133 (328)
++ ....|+|+||+..+.
T Consensus 179 DP~s~~~YlVley~s~G~ 196 (576)
T KOG0585|consen 179 DPESDKLYLVLEYCSKGE 196 (576)
T ss_pred CcccCceEEEEEeccCCc
Confidence 43 468899999999775
No 284
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.44 E-value=0.0019 Score=58.41 Aligned_cols=75 Identities=12% Similarity=0.003 Sum_probs=48.2
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.+|.|..+.+|++.... ..+++|..... . ...+..|..+++.+.+. .+...+..... .+..+++||
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSR---FVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCC---CeeeeeEEEec-CCEEEEEEE
Confidence 4568889999999987642 37888876431 1 12345688888777542 23333333222 357899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 81 ~~~g~~L 87 (285)
T cd05630 81 LMNGGDL 87 (285)
T ss_pred ecCCCcH
Confidence 9999754
No 285
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.44 E-value=0.0022 Score=54.99 Aligned_cols=74 Identities=18% Similarity=0.084 Sum_probs=52.3
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+.++.|....+|++...+ ..+++|..... ....+..|.+.++.+.. ..+++++..... ....++++|++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~ 79 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH---PNIVKLYGVFED-PEPLYLVMEYC 79 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC---CChhhheeeeec-CCceEEEEecc
Confidence 3567788889999998865 48999998753 23456778877777733 345555554432 46789999999
Q ss_pred cCCC
Q 020294 130 EFGS 133 (328)
Q Consensus 130 ~G~~ 133 (328)
+|.+
T Consensus 80 ~~~~ 83 (225)
T smart00221 80 EGGD 83 (225)
T ss_pred CCCC
Confidence 9874
No 286
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.44 E-value=0.0032 Score=56.93 Aligned_cols=75 Identities=15% Similarity=0.082 Sum_probs=49.2
Q ss_pred eeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 56 ICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
...++.|..+.+|++... ++ .+.+|...... ...+..|++.++.+.+ -.+.+++..... .+..+++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv 85 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH---EHIVKFYGVCGD-GDPLIMV 85 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC---CCcceEEEEEcc-CCceEEE
Confidence 456788888999998642 12 36667765432 2346678777777643 235555555433 4578999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 86 ~e~~~~~~L 94 (291)
T cd05094 86 FEYMKHGDL 94 (291)
T ss_pred EecCCCCcH
Confidence 999999864
No 287
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.43 E-value=0.0024 Score=57.59 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=50.8
Q ss_pred eeeeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294 54 TKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~ 122 (328)
.-+..++.|..+.+|++... .+.+.+|...... ...+..|+..++.+.+ -.+.+++..... +...
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~iv~~~~~~~~-~~~~ 83 (288)
T cd05050 8 EYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH---PNIVKLLGVCAV-GKPM 83 (288)
T ss_pred eecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC---CchheEEEEEcC-CCcc
Confidence 33556788889999998752 2477888875422 2346678887777743 234555554432 3567
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||++|+.+
T Consensus 84 ~lv~e~~~~~~L 95 (288)
T cd05050 84 CLLFEYMAYGDL 95 (288)
T ss_pred EEEEecCCCCCH
Confidence 999999999753
No 288
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.43 E-value=0.0019 Score=56.90 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=49.3
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|..+.+|.+.... ..+++|..... ....+..|...++.+.+ -.+++++..... .+..++++|+
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~ 80 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH---PNIVQYQESFEE-NGNLYIVMDY 80 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC---CCeeeeEeeecC-CCeEEEEEec
Confidence 5678888889999987643 37888875421 12345667777777653 224445444322 4688999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 81 ~~~~~l 86 (256)
T cd08218 81 CEGGDL 86 (256)
T ss_pred CCCCcH
Confidence 998753
No 289
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.43 E-value=0.0012 Score=59.17 Aligned_cols=73 Identities=16% Similarity=0.051 Sum_probs=47.2
Q ss_pred eeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 57 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
+.++.|..+.+|+.... ++ .+++|...... ...+..|++.++.+.+ -.+++++..... ....++||||++
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 85 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYITRYYGSYLK-GTKLWIIMEYLG 85 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC---CccHhhhccccc-CCceEEEEEccC
Confidence 44677888899998653 33 78888875321 2346677777776643 234445544332 457899999999
Q ss_pred CCC
Q 020294 131 FGS 133 (328)
Q Consensus 131 G~~ 133 (328)
|+.
T Consensus 86 ~~~ 88 (277)
T cd06642 86 GGS 88 (277)
T ss_pred CCc
Confidence 875
No 290
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.42 E-value=0.0028 Score=57.72 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=50.9
Q ss_pred eeeeeCCcccceeEEEEeC--------C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 55 KICPVGGGCINLASRYGTD--------A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~--------~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
-.++++.|..+.+|+.... + ..+++|..... ....+..|...++.+.++ -.+.+++..... .+.
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~ 95 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-DGP 95 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccC--CCchheeEEEec-CCc
Confidence 3467888999999988631 1 15778876532 123467788888888544 234555554332 467
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++|||++++.+
T Consensus 96 ~~lv~e~~~~~~L 108 (304)
T cd05101 96 LYVIVEYASKGNL 108 (304)
T ss_pred eEEEEecCCCCcH
Confidence 8999999998753
No 291
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.42 E-value=0.0032 Score=57.45 Aligned_cols=78 Identities=18% Similarity=0.134 Sum_probs=51.6
Q ss_pred eeeeeeCCcccceeEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294 54 TKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 120 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~ 120 (328)
.-.+.+|.|..+.||++...+ ..+++|...... ...+..|.+.++.+.++ -.+.+++..... .+
T Consensus 21 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~-~~ 97 (307)
T cd05098 21 VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-DG 97 (307)
T ss_pred EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC--CCEeeEEEEEec-CC
Confidence 335678889999999986421 258888876421 22355688888877544 245555554433 46
Q ss_pred ceEEEEeeecCCCC
Q 020294 121 GSYIIMEFIEFGSS 134 (328)
Q Consensus 121 ~~~~v~e~l~G~~~ 134 (328)
..+++|||++|+.+
T Consensus 98 ~~~lv~e~~~~~~L 111 (307)
T cd05098 98 PLYVIVEYASKGNL 111 (307)
T ss_pred ceEEEEecCCCCcH
Confidence 78999999998753
No 292
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.42 E-value=0.0012 Score=58.34 Aligned_cols=75 Identities=11% Similarity=0.030 Sum_probs=49.9
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.++.|..+.+|++... +..+++|..... ....+..|.+.++.+.+. .++.++..... ....++++|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e 80 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP---FLVNLWYSFQD-EENMYLVVD 80 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCC---ChHHHHHhhcC-CCeEEEEEe
Confidence 566888889999999875 347888987531 124466777777777432 24444433322 457899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 81 ~~~~~~L 87 (258)
T cd05578 81 LLLGGDL 87 (258)
T ss_pred CCCCCCH
Confidence 9999754
No 293
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.42 E-value=0.0018 Score=57.03 Aligned_cols=75 Identities=16% Similarity=0.056 Sum_probs=49.4
Q ss_pred eeeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
-++.++.|..+.+|.+.... ..+++|..... ....+..|.++++.+.+. .+.+++..... .+..+++||
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~-~~~~~~~~e 79 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHP---NIIAYYNHFMD-DNTLLIEME 79 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCC---CeeEEEeEEec-CCeEEEEEE
Confidence 35677888888888877533 37888875421 123466788888877432 34445544332 467899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
|++|+.
T Consensus 80 ~~~~~~ 85 (256)
T cd08221 80 YANGGT 85 (256)
T ss_pred ecCCCc
Confidence 999875
No 294
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.41 E-value=0.0012 Score=59.69 Aligned_cols=76 Identities=17% Similarity=0.151 Sum_probs=48.7
Q ss_pred eeeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 55 KICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
-.+.++.|..+.+|+.... ...+.+|...... ...+..|...++.+.. -.+++++..... .+..+
T Consensus 10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~ 85 (288)
T cd05061 10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC---HHVVRLLGVVSK-GQPTL 85 (288)
T ss_pred eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCcE
Confidence 3567899999999997532 1267888764321 1224456666666643 246666654332 45789
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
++|||++|+++
T Consensus 86 lv~e~~~~g~L 96 (288)
T cd05061 86 VVMELMAHGDL 96 (288)
T ss_pred EEEeCCCCCCH
Confidence 99999999864
No 295
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.41 E-value=0.0012 Score=59.28 Aligned_cols=78 Identities=17% Similarity=0.133 Sum_probs=51.4
Q ss_pred eeeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294 53 ITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~ 122 (328)
+.-.+.++.|..+.+|++... ++ .+.+|...... ...+..|.+.++.+.+ -.+.+++..... .+..
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~ 82 (280)
T cd05092 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH---QHIVRFYGVCTE-GRPL 82 (280)
T ss_pred ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC---CCCceEEEEEec-CCce
Confidence 445677888999999998642 12 45666654321 3457778888887754 235555554433 3578
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||++|+.+
T Consensus 83 ~lv~e~~~~~~L 94 (280)
T cd05092 83 LMVFEYMRHGDL 94 (280)
T ss_pred EEEEecCCCCCH
Confidence 999999998864
No 296
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.41 E-value=0.0025 Score=58.36 Aligned_cols=73 Identities=15% Similarity=0.157 Sum_probs=47.2
Q ss_pred eeeCCcccceeEEEEeCC----ccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEeeec
Q 020294 57 CPVGGGCINLASRYGTDA----GSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIE 130 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~l~ 130 (328)
..+|.|..+.||++...+ ..+++|...... ......|+.+++.+.+. .+.+++...... +...+++||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHP---NVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCC---CCcceeeeEecCCCcEEEEEEeccC
Confidence 358899999999987532 368888875432 33466899999888653 233333322111 346789999987
Q ss_pred CC
Q 020294 131 FG 132 (328)
Q Consensus 131 G~ 132 (328)
+.
T Consensus 84 ~~ 85 (317)
T cd07868 84 HD 85 (317)
T ss_pred CC
Confidence 63
No 297
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.41 E-value=0.0026 Score=58.29 Aligned_cols=78 Identities=18% Similarity=0.184 Sum_probs=51.0
Q ss_pred ceeeeeeeCCcccceeEEEEe-CCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 52 HITKICPVGGGCINLASRYGT-DAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~-~~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
....+..+|.|..+.||+... .++ .+++|...... ...+..|...++.+.+ -.+.+++.... .+.
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~g~~~--~~~ 82 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST 82 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEc--CCC
Confidence 345577889999999999864 222 37888875321 2345567777776643 23555665543 346
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.++++++++++.+
T Consensus 83 ~~~v~e~~~~g~l 95 (316)
T cd05108 83 VQLITQLMPFGCL 95 (316)
T ss_pred ceeeeecCCCCCH
Confidence 7899999988754
No 298
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.40 E-value=0.004 Score=55.87 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=47.6
Q ss_pred eeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 57 CPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
..++.|....+|+..... + .+++|...... ...+..|++.++.+.+. .+++++..... .+..+++|||++|
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~---~ii~~~~~~~~-~~~~~~v~e~~~~ 86 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHP---NIVKLLDAFYY-ENNLWILIEFCAG 86 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCC---CeeeEEEEEee-CCEEEEEEEecCC
Confidence 447778888999987653 3 56677664322 23455677777777532 34445543332 4678999999998
Q ss_pred CCC
Q 020294 132 GSS 134 (328)
Q Consensus 132 ~~~ 134 (328)
+.+
T Consensus 87 ~~l 89 (282)
T cd06643 87 GAV 89 (282)
T ss_pred CcH
Confidence 753
No 299
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.40 E-value=0.0024 Score=57.46 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=49.4
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
++.++.|..+.+|++... +..+++|..... . ...+..|...++.+.+ -.+++++..... ++..+++|||+
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS---PYIVDFYGAFFI-EGAVYMCMEYM 81 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC---CcHHhhhhheec-CCeEEEEEeec
Confidence 456788889999999875 347888866432 1 2345567777776643 234444443332 46889999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|..+
T Consensus 82 ~~~~l 86 (286)
T cd06622 82 DAGSL 86 (286)
T ss_pred CCCCH
Confidence 99853
No 300
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.39 E-value=0.004 Score=57.02 Aligned_cols=80 Identities=18% Similarity=0.165 Sum_probs=52.3
Q ss_pred ceeeeeeeCCcccceeEEEEeC---------CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccC
Q 020294 52 HITKICPVGGGCINLASRYGTD---------AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP 118 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~---------~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~ 118 (328)
...-.+.++.|....+|+++.. ...+++|..... . ...+..|...++.+.++ -.+.+++.....
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~- 89 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH--KNIINLLGVCTQ- 89 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC--CCeeeEEEEEcc-
Confidence 3444677899999999998631 125778876532 1 23356788877777543 245556654433
Q ss_pred CCceEEEEeeecCCCC
Q 020294 119 TGGSYIIMEFIEFGSS 134 (328)
Q Consensus 119 ~~~~~~v~e~l~G~~~ 134 (328)
.+..+++|||++|+.+
T Consensus 90 ~~~~~lv~e~~~~g~L 105 (314)
T cd05099 90 EGPLYVIVEYAAKGNL 105 (314)
T ss_pred CCceEEEEecCCCCcH
Confidence 4678999999999854
No 301
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.39 E-value=0.0026 Score=58.41 Aligned_cols=73 Identities=21% Similarity=0.120 Sum_probs=49.5
Q ss_pred eeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccc---cCCC-ceEEE
Q 020294 55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGA---LPTG-GSYII 125 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~---~~~~-~~~~v 125 (328)
..+-+|.|....||.....+ | .+.+|...... .+.+++|..+|..|. .|+++.+.. ..++ ...+.
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCeeeEee
Confidence 34457789999999988764 4 66777765322 344778888887774 455555432 1133 58999
Q ss_pred EeeecCCC
Q 020294 126 MEFIEFGS 133 (328)
Q Consensus 126 ~e~l~G~~ 133 (328)
|||++|+.
T Consensus 95 mEy~~~Gs 102 (313)
T KOG0198|consen 95 MEYAPGGS 102 (313)
T ss_pred eeccCCCc
Confidence 99999985
No 302
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.39 E-value=0.00082 Score=60.53 Aligned_cols=75 Identities=16% Similarity=0.027 Sum_probs=50.3
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
++.++.|..+.+|++... ++ .+++|+.... ....+..|.+.++.+.+ -.+++++..... .+..+++|||+
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 85 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS---PYIVSFYGAFLN-ENNICMCMEFM 85 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC---CCcceEeeeEec-CCEEEEEEecC
Confidence 456788899999998764 34 6777765432 12456678888877743 245555554433 46789999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 86 ~~~~L 90 (284)
T cd06620 86 DCGSL 90 (284)
T ss_pred CCCCH
Confidence 99753
No 303
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.38 E-value=0.002 Score=60.21 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=45.7
Q ss_pred eeeeeCCcccceeEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCce
Q 020294 55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS 122 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~ 122 (328)
-++.+|.|..+.||++... +..+.+|..... . ...+..|...++.+.+. .+.+++...... ....
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~ 97 (355)
T cd07874 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIISLLNVFTPQKSLEEFQDV 97 (355)
T ss_pred EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCC---chhceeeeeecccccccccee
Confidence 3567899999999998753 337888876532 1 23345677777777542 233333321110 2356
Q ss_pred EEEEeeecCC
Q 020294 123 YIIMEFIEFG 132 (328)
Q Consensus 123 ~~v~e~l~G~ 132 (328)
+++|||++|.
T Consensus 98 ~lv~e~~~~~ 107 (355)
T cd07874 98 YLVMELMDAN 107 (355)
T ss_pred EEEhhhhccc
Confidence 9999999764
No 304
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.38 E-value=0.00095 Score=59.30 Aligned_cols=74 Identities=14% Similarity=0.044 Sum_probs=48.0
Q ss_pred eeeCCcccceeEEEEe--CCccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 57 CPVGGGCINLASRYGT--DAGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
+.++.|..+.+|++.. ++..+++|..... ....+..|...++.+.+ -.+++++..... ++..+++||+
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~v~e~ 83 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASFIE-DNELNIVLEL 83 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC---CchhhhhheeEe-CCeEEEEEEe
Confidence 4567788889999885 3348889865421 12345567777777743 234445544332 4678999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 84 ~~~~~L 89 (267)
T cd08229 84 ADAGDL 89 (267)
T ss_pred cCCCCH
Confidence 998754
No 305
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.37 E-value=0.0022 Score=57.50 Aligned_cols=73 Identities=10% Similarity=0.043 Sum_probs=47.8
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
+..++.|..+.+|+.... + ..+++|..... ....+..|+.+++.+.+. .+.+++..... ....+++|||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~-~~~~~~v~e~ 81 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHP---NLVNLIEVFRR-KRKLHLVFEY 81 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCC---CEeeeeeEEee-CCEEEEEEec
Confidence 456788888999998764 2 37888876421 123456788888777542 24444433322 3577999999
Q ss_pred ecCC
Q 020294 129 IEFG 132 (328)
Q Consensus 129 l~G~ 132 (328)
++|.
T Consensus 82 ~~~~ 85 (286)
T cd07847 82 CDHT 85 (286)
T ss_pred cCcc
Confidence 9985
No 306
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.37 E-value=0.0023 Score=60.20 Aligned_cols=73 Identities=12% Similarity=0.103 Sum_probs=46.3
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCC----CceEE
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~----~~~~~ 124 (328)
.+.+|.|..+.||++... + ..+++|..... ....+..|..+++.+.+. .+.+++....... ...++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHD---NVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCC---CcCCHhheecCCCccccceEEE
Confidence 456888999999998853 3 47899976532 123456788888877542 2333333322211 25789
Q ss_pred EEeeecC
Q 020294 125 IMEFIEF 131 (328)
Q Consensus 125 v~e~l~G 131 (328)
+|||+++
T Consensus 82 v~e~~~~ 88 (372)
T cd07853 82 VTELMQS 88 (372)
T ss_pred Eeecccc
Confidence 9999875
No 307
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.37 E-value=0.0034 Score=55.19 Aligned_cols=73 Identities=18% Similarity=0.094 Sum_probs=48.2
Q ss_pred eeeCCcccceeEEEEeC-C-ccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 57 CPVGGGCINLASRYGTD-A-GSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
+.++.|....+|+.... + ..+++|..... ....+..|.+.++.+.+ -.+++++..... ....++++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~ 81 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH---PNIVQYLGTERE-EDNLYIFL 81 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC---CCchheeeeEec-CCeEEEEE
Confidence 45788888899998764 3 47888876421 11345667777776643 234555544332 45789999
Q ss_pred eeecCCC
Q 020294 127 EFIEFGS 133 (328)
Q Consensus 127 e~l~G~~ 133 (328)
||++|..
T Consensus 82 e~~~~~~ 88 (258)
T cd06632 82 ELVPGGS 88 (258)
T ss_pred EecCCCc
Confidence 9999875
No 308
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.36 E-value=0.0022 Score=57.56 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=50.5
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|..+.+|++...+ ..+++|..... ....+..|.+.++.+.+. .+++++..... .+..+++|||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~iv~e~ 81 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE---NIVNLKEAFRR-KGRLYLVFEY 81 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCC---CeeehhheEEE-CCEEEEEEec
Confidence 4567888888999987643 37889976531 235577889888888642 34555544332 4578999999
Q ss_pred ecCC
Q 020294 129 IEFG 132 (328)
Q Consensus 129 l~G~ 132 (328)
++++
T Consensus 82 ~~~~ 85 (288)
T cd07833 82 VERT 85 (288)
T ss_pred CCCC
Confidence 9985
No 309
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.36 E-value=0.0018 Score=58.20 Aligned_cols=72 Identities=15% Similarity=0.081 Sum_probs=47.5
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|..+.+|++... +| .+++|..... ....+..|++.++.+.+. .+.+++..... .+..++++||
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~ 80 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK---NIVRLYDVLHS-DKKLTLVFEY 80 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCC---CeeeHHHHhcc-CCceEEEEec
Confidence 456788888999998764 34 6788876421 123466788888877542 34444443322 4578999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
++|
T Consensus 81 ~~~ 83 (284)
T cd07839 81 CDQ 83 (284)
T ss_pred CCC
Confidence 876
No 310
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.36 E-value=0.0022 Score=57.47 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=48.4
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.++.|....+|++... + ..+++|..... ....+..|.+.++.+.+ -.+++++..... .+..+++|||
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~iv~~~~~~~~-~~~~~iv~e~ 79 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH---PNIVRLLDVVHS-ENKLYLVFEF 79 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC---CCccCHhheecc-CCeEEEEEec
Confidence 456788888999998753 3 37889977532 12346678888887753 245555554433 4688999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
+++
T Consensus 80 ~~~ 82 (283)
T cd07835 80 LDL 82 (283)
T ss_pred cCc
Confidence 864
No 311
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.36 E-value=0.0033 Score=56.70 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=46.0
Q ss_pred eeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 57 CPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
+.++.|..+.+|+..... ..+.+|...... ...+..|...++.+.+ -.+.+++..... .+..+++
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv 81 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH---PHVIKLYGACSQ-DGPLLLI 81 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCCcEEE
Confidence 456788888999976421 246667665321 2345678777776643 234444443322 4678999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
+||.+|+.+
T Consensus 82 ~e~~~~~~L 90 (290)
T cd05045 82 VEYAKYGSL 90 (290)
T ss_pred EEecCCCCH
Confidence 999998754
No 312
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.36 E-value=0.0037 Score=55.25 Aligned_cols=72 Identities=18% Similarity=0.098 Sum_probs=46.3
Q ss_pred eeCCcccceeEEEEe--CC---ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 58 PVGGGCINLASRYGT--DA---GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~--~~---~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+|.|..+.+|+... .+ ..+++|...... ...+..|.+.++.+.+ -.+.+++.... ....+++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~~~~v~e~ 76 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH---PCIVRLIGVCK--GEPLMLVMEL 76 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEc--CCceEEEEEe
Confidence 467788889988643 22 368899876432 2345667777777643 23444554433 3467999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+++
T Consensus 77 ~~~~~L 82 (257)
T cd05060 77 APLGPL 82 (257)
T ss_pred CCCCcH
Confidence 998753
No 313
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.35 E-value=0.0033 Score=55.60 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=46.0
Q ss_pred eeCCcccceeEEEEe----CCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 58 PVGGGCINLASRYGT----DAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~----~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.++.|..+.+|+... ....+++|+..... ...+..|...++.+.+ -.+.+++.... ....+++||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN---PYIVRMIGICE--AESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC---CCcceEEEEEc--CCCcEEEEec
Confidence 467888889998643 22478889875321 2345667777776643 23455555432 3467899999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
.+++++
T Consensus 77 ~~~~~L 82 (257)
T cd05116 77 AELGPL 82 (257)
T ss_pred CCCCcH
Confidence 998754
No 314
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.35 E-value=0.0035 Score=58.32 Aligned_cols=77 Identities=17% Similarity=0.142 Sum_probs=49.9
Q ss_pred eeeeCCcccceeEEEEeC---C----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYGTD---A----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~---~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
.+.+|.|..+.||++... + ..+.+|+..... ...+..|.+.++.+..+ -.+.+++......+...++
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h--~niv~~~~~~~~~~~~~~~ 89 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH--LNVVNLLGACTKPGGPLMV 89 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccC--cchhheeeeEecCCCCEEE
Confidence 466888999999987521 1 368889875321 12345688888877443 2355555543332456789
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
+|||++|+.+
T Consensus 90 v~ey~~~~~L 99 (337)
T cd05054 90 IVEYCKFGNL 99 (337)
T ss_pred EEecCCCCCH
Confidence 9999999865
No 315
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.35 E-value=0.0029 Score=55.74 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=45.0
Q ss_pred eeCCcccceeEEEEeCCc------------cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 58 PVGGGCINLASRYGTDAG------------SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~------------~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
.+|.|..+.+|+....+. .+++|...... ...+..|+..++.+.+ -.+.+++..... +..+
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~--~~~~ 76 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH---KHLVKLYGVCVR--DENI 76 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC---cchhheeeEEec--CCcE
Confidence 467888899998876432 25666654322 3445667777766643 234444444332 5679
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
++|||++|+.+
T Consensus 77 lv~e~~~~~~L 87 (259)
T cd05037 77 MVEEYVKFGPL 87 (259)
T ss_pred EEEEcCCCCcH
Confidence 99999999753
No 316
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.35 E-value=0.0016 Score=62.07 Aligned_cols=138 Identities=20% Similarity=0.226 Sum_probs=84.3
Q ss_pred eeeeeeeCCcccceeEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 53 ITKICPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
..+++.||+|..+.||+-.. .+| -+.||.-+-+ .+-...+|+.+|+.|.+-.-+..-.++.... .+..|+|
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siYlV 196 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIYLV 196 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEEEE
Confidence 35688899999999999764 455 4556655421 2344678999999997642223333332221 3688999
Q ss_pred EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294 126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205 (328)
Q Consensus 126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 205 (328)
+||.+-. |+-|-..+.- .|. . ..+..
T Consensus 197 FeYMdhD------------L~GLl~~p~v--kft---------~----------------~qIKc--------------- 222 (560)
T KOG0600|consen 197 FEYMDHD------------LSGLLSSPGV--KFT---------E----------------PQIKC--------------- 222 (560)
T ss_pred Eecccch------------hhhhhcCCCc--ccC---------h----------------HHHHH---------------
Confidence 9998764 2222211110 010 0 01221
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
.+.++++.+.. .....++|+|+++.|||+|++|++.|=||.
T Consensus 223 -~mkQLl~Gl~~-----cH~~gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 223 -YMKQLLEGLEY-----CHSRGVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred -HHHHHHHHHHH-----HhhcCeeeccccccceEEcCCCCEEecccc
Confidence 23334444332 135689999999999999999999999974
No 317
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.33 E-value=0.0033 Score=57.26 Aligned_cols=74 Identities=11% Similarity=0.050 Sum_probs=48.8
Q ss_pred eeeeCCcccceeEEEEeCC----ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEE
Q 020294 56 ICPVGGGCINLASRYGTDA----GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~----~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~ 124 (328)
+..++.|..+.+|++.... ..+++|..... ....+..|+.+++.+.+. .+.+++...... ....++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHE---NVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCC---CccceEEEEeCCCCceEEE
Confidence 3458888899999998743 48999987641 124456788888877542 344444443321 257899
Q ss_pred EEeeecCC
Q 020294 125 IMEFIEFG 132 (328)
Q Consensus 125 v~e~l~G~ 132 (328)
|||++++.
T Consensus 82 v~e~~~~~ 89 (316)
T cd07842 82 LFDYAEHD 89 (316)
T ss_pred EEeCCCcC
Confidence 99998763
No 318
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.33 E-value=0.0014 Score=58.76 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=46.4
Q ss_pred eeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
...++.|..+.+|+.... ...+.+|...... ...+..|...++.+.. -.+.+++..... .+..++
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~l 86 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQPTLV 86 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCeEE
Confidence 456788888899986532 1268888764321 1234567777766643 234455544332 457899
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
+|||++|+.+
T Consensus 87 v~e~~~~~~L 96 (277)
T cd05062 87 IMELMTRGDL 96 (277)
T ss_pred EEecCCCCCH
Confidence 9999998753
No 319
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.33 E-value=0.0019 Score=57.34 Aligned_cols=75 Identities=20% Similarity=0.089 Sum_probs=47.4
Q ss_pred eeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEE
Q 020294 56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~ 124 (328)
.+.++.|..+.+|+....+ + .+++|..... . ...+..|+..++.+.+. .+++++...... ....++
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHE---RIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCC---CeeeEEeEeccCCCceEEE
Confidence 4567778888999987543 3 7888865321 1 13456688888877542 344455433221 245789
Q ss_pred EEeeecCCC
Q 020294 125 IMEFIEFGS 133 (328)
Q Consensus 125 v~e~l~G~~ 133 (328)
+||+++|+.
T Consensus 84 v~e~~~~~~ 92 (265)
T cd06652 84 FMEHMPGGS 92 (265)
T ss_pred EEEecCCCc
Confidence 999999875
No 320
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.32 E-value=0.0033 Score=55.89 Aligned_cols=78 Identities=26% Similarity=0.154 Sum_probs=50.5
Q ss_pred eeeeeeeCCcccceeEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 53 ITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
....+.++.|....+|++... ++ .+++|...... ...+..|++.++.+.+ ..+.+++..... .+..+
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~ 82 (268)
T cd05063 7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH---HNIIRLEGVVTK-FKPAM 82 (268)
T ss_pred ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC---CCeeEEEEEEcc-CCCcE
Confidence 344567888888999998753 22 57788765321 2345567777666643 245555554432 46789
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
++||+++|+.+
T Consensus 83 lv~e~~~~~~L 93 (268)
T cd05063 83 IITEYMENGAL 93 (268)
T ss_pred EEEEcCCCCCH
Confidence 99999998753
No 321
>PTZ00284 protein kinase; Provisional
Probab=97.32 E-value=0.0031 Score=61.41 Aligned_cols=77 Identities=13% Similarity=-0.030 Sum_probs=48.7
Q ss_pred eeeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCC---CCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRT---IRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~---v~VP~~~~~~~~~~~~~~~v~e 127 (328)
-++.+|.|..+.||+..... ..+.+|+.... .......|.++++.+..... ..+..++.+.....+..+++|+
T Consensus 133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~ 212 (467)
T PTZ00284 133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMP 212 (467)
T ss_pred EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEe
Confidence 35678999999999987642 36888987532 12335668888887765322 2345555443332356788888
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
+..|
T Consensus 213 ~~g~ 216 (467)
T PTZ00284 213 KYGP 216 (467)
T ss_pred ccCC
Confidence 7643
No 322
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.31 E-value=0.0047 Score=56.66 Aligned_cols=91 Identities=13% Similarity=0.030 Sum_probs=53.3
Q ss_pred hHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcc
Q 020294 38 DPIREWILSEGKATHITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAP 109 (328)
Q Consensus 38 ~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP 109 (328)
.++....-...+......+..++.|....+|++... + ..+++|...... ...+..|++.++.+.+. .+.
T Consensus 12 ~~~~~~~~~~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv 88 (317)
T cd06635 12 PEIAELFFKEDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHP---NSI 88 (317)
T ss_pred HHHHHHhcCCCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCC---CEE
Confidence 334444433323323445677888998999998764 3 378888765321 12355677777766432 233
Q ss_pred cceeccccCCCceEEEEeeecCC
Q 020294 110 RPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 110 ~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
+.+..... +...+++|||++|.
T Consensus 89 ~~~~~~~~-~~~~~lv~e~~~g~ 110 (317)
T cd06635 89 EYKGCYLR-EHTAWLVMEYCLGS 110 (317)
T ss_pred EEEEEEee-CCeEEEEEeCCCCC
Confidence 34433222 35789999999873
No 323
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.31 E-value=0.0062 Score=55.23 Aligned_cols=76 Identities=18% Similarity=0.170 Sum_probs=47.8
Q ss_pred eeeeCCcccceeEEEEeCC-c---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA-G---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+.++.|....+|++...+ + ...+|..... ....+..|.+.+..+.++ -.+.+++..... .+..+++||
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-~~~~~lv~e 83 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHH--PNIINLLGACEN-RGYLYIAIE 83 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCC--CchhheEEEEcc-CCcceEEEE
Confidence 3457888999999986533 2 2455655421 123466788888877543 134455544332 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|.+++.+
T Consensus 84 ~~~~~~L 90 (297)
T cd05089 84 YAPYGNL 90 (297)
T ss_pred ecCCCcH
Confidence 9998753
No 324
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.30 E-value=0.0038 Score=55.91 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=51.5
Q ss_pred ceeeeeeeCCcccceeEEEEeC-Cc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 52 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
...-.+.+|.|..+.+|+.... ++ .+.+|...... ...+..|+..++.+.+ ..+.+++.... .+.
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~ 82 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH---PHVVRLLGICL--SSQ 82 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEe--cCc
Confidence 3455677899999999998753 22 47788765432 2345667877777743 34555555443 267
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++|||++|+.+
T Consensus 83 ~~~v~e~~~~g~L 95 (279)
T cd05057 83 VQLITQLMPLGCL 95 (279)
T ss_pred eEEEEecCCCCcH
Confidence 8999999998764
No 325
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.30 E-value=0.0035 Score=56.98 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=47.8
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
...++.|..+.+|++... +..+++|..... ....+..|...++.+.+ -.+++++..... .+..+++|||++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~iv~e~~~ 101 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH---QNVVEMYKSYLV-GEELWVLMEFLQ 101 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC---Cchhhhhhheee-CCeEEEEEecCC
Confidence 445788888999998764 347888886421 23345567766666532 234445543322 467899999999
Q ss_pred CCC
Q 020294 131 FGS 133 (328)
Q Consensus 131 G~~ 133 (328)
|..
T Consensus 102 ~~~ 104 (297)
T cd06659 102 GGA 104 (297)
T ss_pred CCC
Confidence 875
No 326
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.29 E-value=0.0046 Score=54.91 Aligned_cols=75 Identities=16% Similarity=0.041 Sum_probs=47.1
Q ss_pred eeeCCcccceeEEEEeCC-----ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294 57 CPVGGGCINLASRYGTDA-----GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 121 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~ 121 (328)
+.+|.|..+.+|+..... ..+++|...... ...+..|...++.+.+ -.+.+++...... ...
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH---PNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEeeeccCCccccCcc
Confidence 457888999999987532 258888765321 1345667777776643 2344555433221 124
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.++++||++++.+
T Consensus 82 ~~~v~e~~~~~~l 94 (273)
T cd05035 82 PMVILPFMKHGDL 94 (273)
T ss_pred cEEEEeccCCCCH
Confidence 7999999998753
No 327
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.27 E-value=0.0025 Score=56.71 Aligned_cols=77 Identities=14% Similarity=0.042 Sum_probs=48.8
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCceEEEE
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIM 126 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~~~~v~ 126 (328)
.+.++.|..+.+|+....+ ..+++|..... ....+..|...++.+.++ -.+.+.+...... +...+++|
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~ 88 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--RNIATYYGAFIKKNPPGMDDQLWLVM 88 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCC--CCeeeEeeEEeecCCCCCCcEEEEEE
Confidence 3457788888999987532 37888887532 234567788888877543 2344444332111 23578999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 89 e~~~~~~L 96 (272)
T cd06637 89 EFCGAGSV 96 (272)
T ss_pred EcCCCCcH
Confidence 99998753
No 328
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=97.27 E-value=0.0025 Score=57.11 Aligned_cols=133 Identities=20% Similarity=0.230 Sum_probs=78.3
Q ss_pred eeeeeCCcccceeEEEEeCC-c-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCccccee-ccccCCCceEEE
Q 020294 55 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFK-VGALPTGGSYII 125 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~-~~~~~~~~~~~v 125 (328)
-+..+|.|...+|-.|+... | -|.+|+-.... .+....|..+|+.+. .|.+.-+. ...+ .+.-|+|
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~----~PFlv~l~~t~~d-~~~lymv 122 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS----HPFLVKLYGTFKD-NSNLYMV 122 (355)
T ss_pred heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc----CceeEEEEEeecc-CCeEEEE
Confidence 36667889999999998643 4 56667764321 122334566666553 34333332 2222 4688999
Q ss_pred EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294 126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205 (328)
Q Consensus 126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 205 (328)
|||++|+.+ ..-+++... |. ..-.-||+.+
T Consensus 123 meyv~GGEl----------FS~Lrk~~r----F~-----------------e~~arFYAAe------------------- 152 (355)
T KOG0616|consen 123 MEYVPGGEL----------FSYLRKSGR----FS-----------------EPHARFYAAE------------------- 152 (355)
T ss_pred EeccCCccH----------HHHHHhcCC----CC-----------------chhHHHHHHH-------------------
Confidence 999999853 333333332 21 0111233321
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
++-++. ++ ....|+.+||+|.|||+|.+|-.-|.||.
T Consensus 153 -----ivlAle-yl----H~~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 153 -----IVLALE-YL----HSLDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred -----HHHHHH-HH----HhcCeeeccCChHHeeeccCCcEEEEecc
Confidence 111122 22 23479999999999999999988999974
No 329
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.27 E-value=0.0041 Score=55.61 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=48.2
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e 127 (328)
++.++.|..+.+|++...+ ..+++|..... ....+..|++.++.+.+. .+.+++...... .+..+++++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHP---NIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCC---CeeeheeeEecCCCCcEEEEec
Confidence 4567888899999998654 37888887642 123456788888877632 233344333321 267899999
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
|+++
T Consensus 81 ~~~~ 84 (287)
T cd07840 81 YMDH 84 (287)
T ss_pred cccc
Confidence 9976
No 330
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.26 E-value=0.004 Score=55.57 Aligned_cols=73 Identities=11% Similarity=0.067 Sum_probs=44.1
Q ss_pred eeCCcccceeEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 58 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+|.|..+.+|+....++ ..++|...... ...+..|...++.+.+ -.+.+.+..... ....+++|||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~ 77 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH---PNILQCLGQCVE-AIPYLLVFEYC 77 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC---cchhheEEEecC-CCccEEEEecC
Confidence 477888889998754322 45667654321 2345566666665532 245555544332 35679999999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 78 ~~~~L 82 (268)
T cd05086 78 ELGDL 82 (268)
T ss_pred CCCcH
Confidence 98753
No 331
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.26 E-value=0.0034 Score=55.95 Aligned_cols=75 Identities=21% Similarity=0.114 Sum_probs=48.2
Q ss_pred eeeeCCcccceeEEEEeC----Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 56 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~----~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
.+.++.|....||+.... .+ .+.+|...... ...+..|+..++.+.+ -.+++++..... .+..++||
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~ 85 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH---SNIVRLEGVITR-GNTMMIVT 85 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEec-CCCcEEEE
Confidence 455888999999987542 12 56677765321 2345567777766532 345666655432 46789999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 86 e~~~~~~L 93 (266)
T cd05064 86 EYMSNGAL 93 (266)
T ss_pred EeCCCCcH
Confidence 99999853
No 332
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=97.26 E-value=0.0047 Score=55.52 Aligned_cols=75 Identities=9% Similarity=-0.023 Sum_probs=43.3
Q ss_pred eCCcccceeEEEEeC-C-ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGTD-A-GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
++.|..+.+|++... + ..+.+|...... ......|...++.+.....-.++..+..... .+..+++|||++
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~ 80 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLMN 80 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecCC
Confidence 577888999998653 3 378888765311 1223345555555543211123333332222 457899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 81 g~~L 84 (278)
T cd05606 81 GGDL 84 (278)
T ss_pred CCcH
Confidence 9754
No 333
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.26 E-value=0.0023 Score=62.98 Aligned_cols=27 Identities=30% Similarity=0.246 Sum_probs=24.3
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||++++++...|+||.
T Consensus 162 ~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 162 KHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred CCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 469999999999999988888999975
No 334
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.25 E-value=0.0063 Score=54.18 Aligned_cols=75 Identities=17% Similarity=0.061 Sum_probs=48.9
Q ss_pred eeeeeCCcccceeEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 55 KICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
-.+.++.|..+.+|+....+ ..+++|...... ...+..|+..++.+.+ -.+.+.+.... ++..+++
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~--~~~~~lv 84 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH---PHIVKLIGVIT--ENPVWIV 84 (270)
T ss_pred eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CchhceeEEEc--CCCcEEE
Confidence 34667888889999976422 257888876432 2346678877777743 23455554433 3567899
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 85 ~e~~~~~~L 93 (270)
T cd05056 85 MELAPLGEL 93 (270)
T ss_pred EEcCCCCcH
Confidence 999998753
No 335
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.25 E-value=0.0012 Score=61.06 Aligned_cols=70 Identities=10% Similarity=-0.027 Sum_probs=45.6
Q ss_pred eeCCcccceeEEEEeC--CccEEEEecCCCCc-----------------chHHHHHHHHHHHHhcCCCCcccceeccccC
Q 020294 58 PVGGGCINLASRYGTD--AGSFFVKTNRSIGP-----------------SMFEGEALGLGAMYETRTIRAPRPFKVGALP 118 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~~-----------------~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~ 118 (328)
.++.|..+.+|++... +..+++|....... ..+..|.++++.+.+. .+++++.....
T Consensus 16 ~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~- 91 (335)
T PTZ00024 16 HLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHE---NIMGLVDVYVE- 91 (335)
T ss_pred cccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCc---ceeeeeEEEec-
Confidence 4688888999998754 33788998753211 1255788888877542 34444444322
Q ss_pred CCceEEEEeeecC
Q 020294 119 TGGSYIIMEFIEF 131 (328)
Q Consensus 119 ~~~~~~v~e~l~G 131 (328)
.+..+++||+++|
T Consensus 92 ~~~~~lv~e~~~~ 104 (335)
T PTZ00024 92 GDFINLVMDIMAS 104 (335)
T ss_pred CCcEEEEEecccc
Confidence 4678999999976
No 336
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.25 E-value=0.0046 Score=55.43 Aligned_cols=73 Identities=18% Similarity=0.161 Sum_probs=49.0
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.++.++.|..+.+|+.... + ..+++|..... ....+..|++.++.+.+ -.+.+++..... .+..+++||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e 79 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVFE 79 (284)
T ss_pred eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC---CCCcchhhhccc-CCcEEEEee
Confidence 4667888899999998753 3 37888876531 12356778888888854 234445544332 467899999
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
|+.+
T Consensus 80 ~~~~ 83 (284)
T cd07860 80 FLHQ 83 (284)
T ss_pred cccc
Confidence 9864
No 337
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.24 E-value=0.0034 Score=56.26 Aligned_cols=73 Identities=16% Similarity=0.107 Sum_probs=45.1
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+.++.|..+.+|+....+ ..+++|..... .......|...+..+.++ -.+++++..... .+..+++|||+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~ 80 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEH--PNIVKLKEVFRE-NDELYFVFEYM 80 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCC--CCchhHHHHhhc-CCcEEEEEecC
Confidence 3457888889999988643 36888876532 112233566666666522 234445544332 46889999999
Q ss_pred cC
Q 020294 130 EF 131 (328)
Q Consensus 130 ~G 131 (328)
.|
T Consensus 81 ~~ 82 (283)
T cd07830 81 EG 82 (283)
T ss_pred CC
Confidence 44
No 338
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.24 E-value=0.0028 Score=55.68 Aligned_cols=75 Identities=13% Similarity=-0.002 Sum_probs=49.2
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|..+.+|++... + ..+++|..... ....+..|.+.++.+.. -.+++++..... ....+++||+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~ 80 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH---PNIISYKEAFLD-GNKLCIVMEY 80 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC---CCchhhhhhhcc-CCEEEEEehh
Confidence 456788888899998753 3 37899986531 12234567777776653 245555544332 4678999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|..+
T Consensus 81 ~~~~~L 86 (256)
T cd08530 81 APFGDL 86 (256)
T ss_pred cCCCCH
Confidence 998753
No 339
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.24 E-value=0.0047 Score=55.28 Aligned_cols=74 Identities=15% Similarity=0.063 Sum_probs=43.3
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
-++.++.|..+.+|++... ++ .+++|...... ...+..|...+....++ -.+.+++..... ++..+++|||
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~iv~~~~~~~~-~~~~~lv~e~ 81 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDC--PYTVTFYGALFR-EGDVWICMEV 81 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCC--CCeeeeeEEEec-CCcEEEEhhh
Confidence 4567888999999998764 34 78889765321 11222343332222221 234455544332 4678999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
++|
T Consensus 82 ~~~ 84 (283)
T cd06617 82 MDT 84 (283)
T ss_pred hcc
Confidence 876
No 340
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.24 E-value=0.005 Score=54.76 Aligned_cols=76 Identities=17% Similarity=0.012 Sum_probs=47.6
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEE
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~ 124 (328)
.+.++.|..+.+|++... . ..+++|..... . ...+..|..+++.+.+. .+.+++...... ....++
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHE---RIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCC---CeeeEEEEEEcCCCCEEEE
Confidence 355788888999998753 2 37888876421 0 13466788888887542 233333322211 356789
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
++|+++|..+
T Consensus 84 ~~e~~~~~~L 93 (266)
T cd06651 84 FMEYMPGGSV 93 (266)
T ss_pred EEeCCCCCcH
Confidence 9999998754
No 341
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.23 E-value=0.00026 Score=61.17 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=62.4
Q ss_pred hhhcCChhHHHHHHHhcC--CCc-cee---eeeeeCCcccceeEEEE--eCCccEEEEecCCCCcchHHHHHHHHHHHHh
Q 020294 31 AMAALSDDPIREWILSEG--KAT-HIT---KICPVGGGCINLASRYG--TDAGSFFVKTNRSIGPSMFEGEALGLGAMYE 102 (328)
Q Consensus 31 ~~~~~~~~~i~~~l~~~~--~~~-~i~---~v~~i~~G~~n~~y~v~--~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~ 102 (328)
||+.+....=+++..=.. ..+ .+. -+..+|.|-.+.||.-. +++.+.|+|+-.+.....+.+|+.+|+-|..
T Consensus 12 vya~vn~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g 91 (338)
T KOG0668|consen 12 VYADVNEERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG 91 (338)
T ss_pred hhhhccccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC
Confidence 566666655555552110 000 111 24567888889888854 4556899999877666789999999999975
Q ss_pred cCCCCcccceeccccC-CCceEEEEeeecCC
Q 020294 103 TRTIRAPRPFKVGALP-TGGSYIIMEFIEFG 132 (328)
Q Consensus 103 ~~~v~VP~~~~~~~~~-~~~~~~v~e~l~G~ 132 (328)
+-.+-+++....++ ...+.+|+|++...
T Consensus 92 --g~NIi~L~DiV~Dp~SktpaLiFE~v~n~ 120 (338)
T KOG0668|consen 92 --GPNIIKLLDIVKDPESKTPSLIFEYVNNT 120 (338)
T ss_pred --CCCeeehhhhhcCccccCchhHhhhhccc
Confidence 33444455444333 24667777776654
No 342
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=97.23 E-value=0.004 Score=63.12 Aligned_cols=76 Identities=17% Similarity=0.077 Sum_probs=56.4
Q ss_pred eeeeCCcccceeEEEEe-CCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGT-DAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~v~e 127 (328)
++.++.|....+|++.. .++ .-.+||-... ..+.++.|..+|+.+..+ -.|++-|.+.... ++.-|+|||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h--pnv~~fyg~~~k~~~~~~DqLWLVME 101 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH--PNVATFYGAFIKKDPGNGDQLWLVME 101 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC--CCcceEEEEEEEecCCCCCeEEEEee
Confidence 45567788889999875 334 4567887642 356688999999999875 5688887765332 468899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
|+.|+.
T Consensus 102 fC~gGS 107 (953)
T KOG0587|consen 102 FCGGGS 107 (953)
T ss_pred ccCCcc
Confidence 999985
No 343
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.23 E-value=0.0058 Score=59.13 Aligned_cols=79 Identities=14% Similarity=0.038 Sum_probs=47.5
Q ss_pred eeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEEEE
Q 020294 53 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIM 126 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~v~ 126 (328)
-.-.+.+|.|..+.||+.... . ..+++|..... .....+|+.+++.+.+..-+.+...+...... ....+++|
T Consensus 68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 444667899999999998764 3 37888876432 23456789888888643212222222211111 12356899
Q ss_pred eeecCC
Q 020294 127 EFIEFG 132 (328)
Q Consensus 127 e~l~G~ 132 (328)
||++|.
T Consensus 147 E~~~~~ 152 (440)
T PTZ00036 147 EFIPQT 152 (440)
T ss_pred ecCCcc
Confidence 999863
No 344
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.22 E-value=0.0029 Score=55.65 Aligned_cols=75 Identities=17% Similarity=0.154 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|....+|++.... ..+++|..... ....+..|++.++.+.+. .+++++..... .+..++++||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~---~i~~~~~~~~~-~~~~~lv~e~ 80 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHP---NIVTFFASFQE-NGRLFIVMEY 80 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCC---Chhhhhheecc-CCeEEEEEec
Confidence 4567888889999987643 37888886431 234567788888877542 34445443322 4678999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|..+
T Consensus 81 ~~~~~L 86 (257)
T cd08225 81 CDGGDL 86 (257)
T ss_pred CCCCcH
Confidence 998753
No 345
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.22 E-value=0.0043 Score=55.66 Aligned_cols=77 Identities=14% Similarity=0.031 Sum_probs=49.4
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceecccc-----CCCceEEEE
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGSYIIM 126 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-----~~~~~~~v~ 126 (328)
++.++.|..+.+|+.... + ..+++|..... ....+..|..+++.+.++ -.+.+.+..... .....+++|
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~ 98 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH--RNIATYYGAFIKKSPPGHDDQLWLVM 98 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCC--CcEEEEeeehhcccccCCCCEEEEEE
Confidence 456788889999998763 3 37888887532 234466777777777543 234444433211 124679999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|+.+
T Consensus 99 e~~~~~~L 106 (282)
T cd06636 99 EFCGAGSV 106 (282)
T ss_pred EeCCCCcH
Confidence 99998754
No 346
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=97.21 E-value=0.00032 Score=72.53 Aligned_cols=135 Identities=17% Similarity=0.209 Sum_probs=79.9
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
+.-||.|..+.|..|.-. +.-|..|+-.. .....|..|..+|-.-- +--+-.+.+.-.+ +..-|+||+
T Consensus 80 lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n---s~Wiv~LhyAFQD-~~~LYlVMd 155 (1317)
T KOG0612|consen 80 LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN---SEWIVQLHYAFQD-ERYLYLVMD 155 (1317)
T ss_pred HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC---cHHHHHHHHHhcC-ccceEEEEe
Confidence 345788899998888753 23565565432 12355666766653211 1112222222221 467899999
Q ss_pred eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294 128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 207 (328)
Q Consensus 128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 207 (328)
|.+|+.+ |.-|-+ |+ . . ..+|.-||..+ +
T Consensus 156 Y~pGGDl----------ltLlSk-------~~-~-------~------pE~~ArFY~aE-i------------------- 184 (1317)
T KOG0612|consen 156 YMPGGDL----------LTLLSK-------FD-R-------L------PEDWARFYTAE-I------------------- 184 (1317)
T ss_pred cccCchH----------HHHHhh-------cC-C-------C------hHHHHHHHHHH-H-------------------
Confidence 9999853 333322 33 1 1 14788888542 1
Q ss_pred HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccc
Q 020294 208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY 254 (328)
Q Consensus 208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~ 254 (328)
+-.+..+ ...+.||+|++|+|||+|..|..-+=||+.|
T Consensus 185 ----VlAldsl-----H~mgyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 185 ----VLALDSL-----HSMGYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred ----HHHHHHH-----HhccceeccCCcceeEecccCcEeeccchhH
Confidence 1111111 2458999999999999999998889998543
No 347
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.20 E-value=0.006 Score=55.30 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=49.1
Q ss_pred eeeeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.-++.++.|..+.+|+.... +..+++|..... ....+..|...++.+.+ -.+++++..... ....++|+||
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e~ 97 (293)
T cd06647 22 TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH---PNIVNYLDSYLV-GDELWVVMEY 97 (293)
T ss_pred eeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC---CCeeehhheeee-CCcEEEEEec
Confidence 34567888999999998753 347888886532 22345567776666642 123444433222 3578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 98 ~~~~~L 103 (293)
T cd06647 98 LAGGSL 103 (293)
T ss_pred CCCCcH
Confidence 998753
No 348
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.20 E-value=0.0061 Score=54.55 Aligned_cols=76 Identities=14% Similarity=0.056 Sum_probs=48.1
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCcccceeccccCC----CceEE
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~----~~~~~ 124 (328)
++.++.|..+.+|++.... ..+++|..... . ...+..|...++.+.+...-.+.+++......+ ...++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 4567788888999998753 48999987631 1 223556888888886422223455554433211 13789
Q ss_pred EEeeecC
Q 020294 125 IMEFIEF 131 (328)
Q Consensus 125 v~e~l~G 131 (328)
+||++++
T Consensus 84 ~~e~~~~ 90 (287)
T cd07838 84 VFEHVDQ 90 (287)
T ss_pred Eehhccc
Confidence 9999875
No 349
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.20 E-value=0.0037 Score=58.04 Aligned_cols=75 Identities=16% Similarity=0.099 Sum_probs=43.0
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEE
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYII 125 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v 125 (328)
-++.+|.|..+.||++... + ..+++|..... ....+..|..+++.+.+..-+.+..++...... ....+++
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 98 (343)
T cd07878 19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV 98 (343)
T ss_pred hheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEE
Confidence 3567899999999998753 3 37888886532 123345688888877543211222222111110 1345788
Q ss_pred Eeee
Q 020294 126 MEFI 129 (328)
Q Consensus 126 ~e~l 129 (328)
+++.
T Consensus 99 ~~~~ 102 (343)
T cd07878 99 TNLM 102 (343)
T ss_pred eecC
Confidence 8876
No 350
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.20 E-value=0.0032 Score=57.16 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=49.3
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
...++.|..+.+|+.... ++ .+++|..... ....+..|...++.+.+ -.+++++..... ....+++|||++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~ 100 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---ENVVEMYNSYLV-GDELWVVMEFLE 100 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC---cchhheeeEEEe-CCEEEEEEecCC
Confidence 456788888999998763 33 7888876421 12346667777777754 234445443322 457899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 101 ~~~L 104 (292)
T cd06657 101 GGAL 104 (292)
T ss_pred CCcH
Confidence 9753
No 351
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.20 E-value=0.0036 Score=56.53 Aligned_cols=75 Identities=21% Similarity=0.191 Sum_probs=49.2
Q ss_pred eeeeCCcccceeEEEEeCC------------------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCccccee
Q 020294 56 ICPVGGGCINLASRYGTDA------------------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFK 113 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~------------------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~ 113 (328)
++.+|.|..+.+|++...+ ..+++|...... ...+..|+++++.+.+. .+.+++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~ 86 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDP---NIARLLG 86 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCC---CEeEEEE
Confidence 5667888888999876542 136778765321 34466788888887542 3444554
Q ss_pred ccccCCCceEEEEeeecCCCC
Q 020294 114 VGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 114 ~~~~~~~~~~~v~e~l~G~~~ 134 (328)
.... ++..+++||+++|+.+
T Consensus 87 ~~~~-~~~~~lv~e~~~~~~L 106 (296)
T cd05051 87 VCTV-DPPLCMIMEYMENGDL 106 (296)
T ss_pred EEec-CCCcEEEEecCCCCCH
Confidence 4332 4678999999998753
No 352
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.19 E-value=0.0029 Score=56.24 Aligned_cols=73 Identities=25% Similarity=0.173 Sum_probs=46.0
Q ss_pred eeCCcccceeEEEEeCC--------ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 58 PVGGGCINLASRYGTDA--------GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~--------~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.+|.|..+.+|+.+..+ ..+.+|..... ....+..|+..++.+.+ -.+.+++..... .+..+++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v 77 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH---PNIVKLLGVCLL-NEPQYII 77 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC---CCeeeEeeeecC-CCCeEEE
Confidence 46778888999887532 25777765432 13345667777776643 234444444332 4678999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
||+++|+++
T Consensus 78 ~e~~~~~~L 86 (269)
T cd05044 78 MELMEGGDL 86 (269)
T ss_pred EeccCCCcH
Confidence 999999754
No 353
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.19 E-value=0.0042 Score=56.03 Aligned_cols=77 Identities=16% Similarity=0.103 Sum_probs=50.7
Q ss_pred eeeeeeCCcccceeEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 54 TKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
.-...++.|..+.+|++.+. ++ .+++|...... ...+..|.+.++.+.+. .+++++..... .+..+
T Consensus 8 ~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~ 83 (288)
T cd05093 8 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE---HIVKFYGVCVE-GDPLI 83 (288)
T ss_pred eeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCC---CcceEEEEEec-CCccE
Confidence 33455788889999998752 12 46777765422 23466788888877542 34455544432 46789
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
++|||.+|+.+
T Consensus 84 lv~e~~~~~~L 94 (288)
T cd05093 84 MVFEYMKHGDL 94 (288)
T ss_pred EEEEcCCCCCH
Confidence 99999998754
No 354
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.19 E-value=0.0094 Score=55.10 Aligned_cols=76 Identities=16% Similarity=0.155 Sum_probs=49.9
Q ss_pred eeeeCCcccceeEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294 56 ICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~ 122 (328)
.+.++.|..+.+|++.... ..+.+|...... ...+..|.++++.+.++. .+.+++..... .+..
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~--~iv~~~~~~~~-~~~~ 93 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHK--NIINLLGACTQ-DGPL 93 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCC--CeeeeeEEEcc-CCce
Confidence 5678889999999986311 157788765321 234667888888875432 34445544332 4578
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||++|+.+
T Consensus 94 ~lv~e~~~~g~L 105 (334)
T cd05100 94 YVLVEYASKGNL 105 (334)
T ss_pred EEEEecCCCCcH
Confidence 999999998753
No 355
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=97.19 E-value=0.0037 Score=57.64 Aligned_cols=73 Identities=12% Similarity=0.090 Sum_probs=45.5
Q ss_pred eeCCc--ccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 58 PVGGG--CINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 58 ~i~~G--~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.||.| ....+|++... ++ .+.+|..... ....+..|.++++.+.+ -.+.+++..... ++..++||||
T Consensus 5 ~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e~ 80 (327)
T cd08227 5 VIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH---PNIVPYRATFIA-DNELWVVTSF 80 (327)
T ss_pred hccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEE-CCEEEEEEec
Confidence 35666 45678887653 44 6778876532 12346667877777743 234445544332 4678999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
++|+.+
T Consensus 81 ~~~~~l 86 (327)
T cd08227 81 MAYGSA 86 (327)
T ss_pred cCCCcH
Confidence 998753
No 356
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.18 E-value=0.0083 Score=53.71 Aligned_cols=78 Identities=22% Similarity=0.100 Sum_probs=50.3
Q ss_pred eeeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCc
Q 020294 53 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 121 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~ 121 (328)
..-++.++.|..+.+|++...+ ..+.+|..+... ...+..|...++.+.+ -.+.+++..... .+.
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~ 83 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH---QNIVRLIGVSFE-RLP 83 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCC
Confidence 3345678889999999987643 267778765321 2335567777776643 234455544332 456
Q ss_pred eEEEEeeecCCCC
Q 020294 122 SYIIMEFIEFGSS 134 (328)
Q Consensus 122 ~~~v~e~l~G~~~ 134 (328)
.+++||+++|+.+
T Consensus 84 ~~lv~e~~~g~~L 96 (277)
T cd05036 84 RFILLELMAGGDL 96 (277)
T ss_pred cEEEEecCCCCCH
Confidence 7999999999764
No 357
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.18 E-value=0.0045 Score=59.17 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=52.7
Q ss_pred eeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 55 KICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
-.+.+|.|..+.||++...+ ..+.+|...... ...+..|.++|..+..+ -.+.+.+..... .+..+
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H--~niv~~~~~~~~-~~~~~ 117 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH--LNIVNLLGACTK-GGPIY 117 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCC--CCeEEEEEEEcc-CCCcE
Confidence 35678999999999987421 268889876421 23466788888887532 235555555433 45789
Q ss_pred EEEeeecCCCC
Q 020294 124 IIMEFIEFGSS 134 (328)
Q Consensus 124 ~v~e~l~G~~~ 134 (328)
++|||++|+.+
T Consensus 118 iv~E~~~~g~L 128 (401)
T cd05107 118 IITEYCRYGDL 128 (401)
T ss_pred EEEeccCCCcH
Confidence 99999999875
No 358
>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.
Probab=97.18 E-value=0.024 Score=49.99 Aligned_cols=214 Identities=12% Similarity=0.146 Sum_probs=110.7
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEeeecCCCC
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFGSS 134 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~l~G~~~ 134 (328)
-+++++|+ ..-||+ |..|+|.-....... --.++.+.|.- .++.+.+|+...... --..|-..+|++|..
T Consensus 18 p~~Lg~~w-~~gwr~----G~vVls~v~~~~~Aa--WsAkvre~L~~-~GvRvaRPvrstDGRyVv~GWrA~~fv~G~~- 88 (272)
T TIGR02569 18 PIQLGAAW-DGGWRV----GNVVFSMVADPARSA--WSARVRETLFP-DGVRVVRPVRSTDGRYVVAGWRADTFVAGTP- 88 (272)
T ss_pred cccCCCCC-CCcEEe----ccEEEeccCCchhhh--hhHHhhhhccC-CCeeEecceecCCCCeEecceeeccccCCCc-
Confidence 33465444 555777 567888754321111 11233334443 378888888764211 113466778899984
Q ss_pred CccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH-HhhhHHHHHHH-------Hhh-CCChHHH
Q 020294 135 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKLA-------LDQ-YGDSTIY 205 (328)
Q Consensus 135 ~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~-~~~l~~~~~~~-------~~~-~~~~~~~ 205 (328)
.....++...--+||...... +.+.+.. .|.+ .+.|. ..|.... +.. ... ..++ ..
T Consensus 89 ~~R~DEvv~aalrlh~Ala~~-----~~P~fl~------~~~~--~d~fa~ADraAW~-e~p~~~~~~~~~~~~~~~-~~ 153 (272)
T TIGR02569 89 EPRVDETVVAALRLHEALGDL-----ERPGPAA------PWAE--IDVFVAADRAAWE-ERPLQSVPPGVPTAPPAA-DP 153 (272)
T ss_pred CcchHHHHHHHHHHHHHHhcC-----CCCcccc------ccch--hhHHHHHHHHHhh-cccccccccccccccccc-hh
Confidence 466667777777888888632 2221111 1211 12221 2222210 000 000 0011 11
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh----hh-cCCChhhHHHHhh
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS----WC-AGFGGSFYNSYFE 280 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~~~G~p~~DLa~~----~~-~~~~~~f~~~Y~~ 280 (328)
....+++..+..+......+..++||||. +|+||....-++|+|.-.++=+..|=-+.. .+ ++.++.+++.+..
T Consensus 154 ~~~~~l~~~l~~lrrpv~~p~QlvHgDl~-gt~lF~g~~~P~itDi~pywRP~~waaAvvvVDal~wg~ad~~ll~rw~h 232 (272)
T TIGR02569 154 QRSIDLINQIAGLLKPIKSPNQVVHADMY-ATTLYAGTQPPGVTDLVPVWRPAGWTAAVAIVDALLWGAVDEGIIERFSH 232 (272)
T ss_pred hHHHHHHHHHHHHhcccCCCcceeeeecc-cceeecCCCCCceeecccccCcchhhhHHHHHHHHHhcCCCHHHHHHhcc
Confidence 11222333333333333467889999996 679998877789999665555555555543 12 5677888888543
Q ss_pred hCCCCCCH---HHHHHHHHHH
Q 020294 281 VMPKQPGF---EKRRDLYMLY 298 (328)
Q Consensus 281 ~~pl~~~~---~~r~~ly~l~ 298 (328)
. ++| ..|.-+|+++
T Consensus 233 ~----p~~~QlllRAllfRl~ 249 (272)
T TIGR02569 233 L----PEWPQLLLRALMFRLA 249 (272)
T ss_pred C----cchHHHHHHHHHHHHH
Confidence 2 334 3455566543
No 359
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.17 E-value=0.0043 Score=55.13 Aligned_cols=76 Identities=18% Similarity=0.075 Sum_probs=48.1
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEE
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~ 124 (328)
.+.++.|..+.+|+.... ++ .+++|..... ....+..|+++++.+.+. .+.+++...... .+..++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHD---RIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCC---CcceEEEEEEcCCCCEEEE
Confidence 446788888999998753 23 7888875321 123466788888888542 234444432221 246789
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
++|+++|..+
T Consensus 84 v~e~~~~~~L 93 (264)
T cd06653 84 FVEYMPGGSI 93 (264)
T ss_pred EEEeCCCCcH
Confidence 9999998753
No 360
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=97.17 E-value=0.0049 Score=55.08 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=46.8
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC--Cc--chHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GP--SMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~--~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~ 128 (328)
++.++.|..+.+|++... + ..+++|..... .. .....|...+..+.++ -.+++++...... .+..+++|||
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPH--PNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCC--CCccceEEEEecCCCCcEEEEEec
Confidence 456788888999999864 2 37888876532 11 1123566666666543 2455566554332 2678999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
.+|
T Consensus 82 ~~~ 84 (282)
T cd07831 82 MDM 84 (282)
T ss_pred CCc
Confidence 876
No 361
>PHA02988 hypothetical protein; Provisional
Probab=97.17 E-value=0.0059 Score=55.20 Aligned_cols=75 Identities=11% Similarity=0.007 Sum_probs=52.0
Q ss_pred eeeCCcccceeEEEEeCCccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCcccceecccc--C-CCceEEEEe
Q 020294 57 CPVGGGCINLASRYGTDAGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIME 127 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~--~-~~~~~~v~e 127 (328)
..++.|....+|+-..++..+++|...... ...+..|+.+++.+.+. .+.+++..... . ....+++||
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSN---NILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCC---CEEEEeeeEEecccCCCceEEEEE
Confidence 456778888999988877789999876421 24456888888888542 45566654322 1 246789999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
|++|+.+
T Consensus 103 y~~~g~L 109 (283)
T PHA02988 103 YCTRGYL 109 (283)
T ss_pred eCCCCcH
Confidence 9999864
No 362
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.17 E-value=0.0046 Score=64.92 Aligned_cols=78 Identities=18% Similarity=0.068 Sum_probs=51.2
Q ss_pred eeeeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEE
Q 020294 54 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII 125 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v 125 (328)
.-++.|+.|..+.||++.... + .+++|..... ....+..|+.+++.|.+. .+.+++...... ....|+|
T Consensus 16 eIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HP---NIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 16 EVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHK---NIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred EEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCC---CcCeEEEEEEecCCCEEEEE
Confidence 346778999999999998643 3 5677775421 134466788888888642 344444432111 3567999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||++|+.+
T Consensus 93 MEY~~gGSL 101 (1021)
T PTZ00266 93 MEFCDAGDL 101 (1021)
T ss_pred EeCCCCCcH
Confidence 999999854
No 363
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.16 E-value=0.0052 Score=53.98 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=49.9
Q ss_pred eeeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
-++.++.|..+.+|++... ...+++|..... ....+..|++.++.+.+. .+++++..... ++..++|||
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~---~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHP---NIIEYYENFLE-DKALMIVME 79 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCC---chhheeeeEec-CCEEEEEEe
Confidence 3567888888899997753 347888876532 123466788888877532 23444433221 467899999
Q ss_pred eecCCCC
Q 020294 128 FIEFGSS 134 (328)
Q Consensus 128 ~l~G~~~ 134 (328)
+++|+.+
T Consensus 80 ~~~~~~L 86 (256)
T cd08220 80 YAPGGTL 86 (256)
T ss_pred cCCCCCH
Confidence 9999754
No 364
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.16 E-value=0.0069 Score=53.90 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=43.8
Q ss_pred eeCCcccceeEEEEeCCc--------------cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294 58 PVGGGCINLASRYGTDAG--------------SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 120 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~~--------------~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~ 120 (328)
.+|.|..+.+|+...... ..++|....... ..+..|...++.+.+ -.+.+++.+... +.
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h---p~iv~~~~~~~~-~~ 77 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH---KHIVLLYGVCVR-DV 77 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CC
Confidence 467788888898753211 467777654222 234455555555532 245555554432 45
Q ss_pred ceEEEEeeecCCCC
Q 020294 121 GSYIIMEFIEFGSS 134 (328)
Q Consensus 121 ~~~~v~e~l~G~~~ 134 (328)
..+++|||++|+.+
T Consensus 78 ~~~lv~e~~~~~~l 91 (262)
T cd05077 78 ENIMVEEFVEFGPL 91 (262)
T ss_pred CCEEEEecccCCCH
Confidence 77999999998753
No 365
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.15 E-value=0.0048 Score=56.28 Aligned_cols=75 Identities=17% Similarity=0.093 Sum_probs=47.3
Q ss_pred eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEE
Q 020294 54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII 125 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v 125 (328)
..++.++.|....+|+.... + ..+++|..... ....+..|.++++.+.+. .+.+++..-... .+..+++
T Consensus 10 ~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 10 EKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHP---NIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred eEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCC---CCcceEEEEecCCCCeEEEE
Confidence 34556788899999998764 2 37888876521 122345788888888653 233344332111 2467999
Q ss_pred EeeecC
Q 020294 126 MEFIEF 131 (328)
Q Consensus 126 ~e~l~G 131 (328)
|||.++
T Consensus 87 ~e~~~~ 92 (309)
T cd07845 87 MEYCEQ 92 (309)
T ss_pred EecCCC
Confidence 999876
No 366
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=97.14 E-value=0.0054 Score=60.13 Aligned_cols=145 Identities=15% Similarity=0.110 Sum_probs=79.0
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcC---CCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETR---TIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~---~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
++.+|.|....|.+.... .+ .+.+|+-.+.. ...-..|+.+|+.|.++. ...+-+.+.+-.. .+..++|+|
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-r~HlciVfE- 268 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-RNHLCIVFE- 268 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-ccceeeeeh-
Confidence 556677777777776543 23 56678876532 123346899999998532 2334444443322 234455555
Q ss_pred ecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHH
Q 020294 129 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 208 (328)
Q Consensus 129 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 208 (328)
.|..-|-.+.+...- -|++. ..+.. ..
T Consensus 269 -----------LL~~NLYellK~n~f---~Glsl-----------------------~~ir~----------------~~ 295 (586)
T KOG0667|consen 269 -----------LLSTNLYELLKNNKF---RGLSL-----------------------PLVRK----------------FA 295 (586)
T ss_pred -----------hhhhhHHHHHHhcCC---CCCCH-----------------------HHHHH----------------HH
Confidence 444456666554431 12110 01111 12
Q ss_pred HHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCC--CeEEEccc-cc-cCCchh
Q 020294 209 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG--EPVILDPA-CY-YGHNEA 260 (328)
Q Consensus 209 ~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~--~~~iID~~-~~-~G~p~~ 260 (328)
.+++..+.- | ....|||+||+|+|||+-+-+ .+.||||. +| .+...+
T Consensus 296 ~Qil~~L~~-L----~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy 346 (586)
T KOG0667|consen 296 QQILTALLF-L----HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY 346 (586)
T ss_pred HHHHHHHHH-H----HhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence 223333221 2 145899999999999996543 36899985 44 454444
No 367
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.14 E-value=0.0056 Score=54.36 Aligned_cols=75 Identities=16% Similarity=0.043 Sum_probs=46.9
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
.+.++.|..+.+|++... +..+++|...... ...+..|...++.+.+ -.+.+.+..... .+..+++|||++
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~ 89 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH---SNIVAYFGSYLR-RDKLWICMEFCG 89 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC---CCeeeEEEEEEe-CCEEEEEEeccC
Confidence 345678888899998753 2378888765322 2335567776666633 123334433222 467899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 90 ~~~L 93 (267)
T cd06645 90 GGSL 93 (267)
T ss_pred CCcH
Confidence 8754
No 368
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.14 E-value=0.0062 Score=53.25 Aligned_cols=75 Identities=12% Similarity=0.092 Sum_probs=56.5
Q ss_pred ceeeeeeeCCcccceeEEEE-eCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 52 HITKICPVGGGCINLASRYG-TDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~-~~~~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
+..-+.+||.|.....|.-. ..+| .+.+|.-+.. .-..+-.|..+++.|+. ++-.|.+.+++.. ....++||+-
T Consensus 16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~--g~GiP~i~~y~~e-~~ynvlVMdL 92 (341)
T KOG1163|consen 16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQG--GVGIPHIRHYGTE-KDYNVLVMDL 92 (341)
T ss_pred ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhcc--CCCCchhhhhccc-cccceeeeec
Confidence 56678899999999999854 3455 7889998753 22446689999999976 5778888888764 3577899985
Q ss_pred e
Q 020294 129 I 129 (328)
Q Consensus 129 l 129 (328)
+
T Consensus 93 L 93 (341)
T KOG1163|consen 93 L 93 (341)
T ss_pred c
Confidence 4
No 369
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.11 E-value=0.0068 Score=56.56 Aligned_cols=75 Identities=12% Similarity=0.119 Sum_probs=47.3
Q ss_pred eeeeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294 54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 121 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~ 121 (328)
..++.++.|..+.+|++... +..+++|..... ....+..|+.+++.+.+. .+.+++...... ...
T Consensus 19 ~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 19 QNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHK---NIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred EEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCC---CCcceeeeeccCCCccccCc
Confidence 34677899999999998763 348899986431 123345688887777542 234444322110 135
Q ss_pred eEEEEeeecC
Q 020294 122 SYIIMEFIEF 131 (328)
Q Consensus 122 ~~~v~e~l~G 131 (328)
.+++|||++|
T Consensus 96 ~~lv~e~~~~ 105 (353)
T cd07850 96 VYLVMELMDA 105 (353)
T ss_pred EEEEEeccCC
Confidence 6999999876
No 370
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.11 E-value=0.0097 Score=52.40 Aligned_cols=72 Identities=22% Similarity=0.194 Sum_probs=47.6
Q ss_pred eeCCcccceeEEEEeCC--c---cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 58 PVGGGCINLASRYGTDA--G---SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~--~---~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.++.|..+.+|++...+ + .+++|..+.... ..+..|...++.+.+. .+.+++.... +...+++||+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~--~~~~~~v~e~ 76 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHE---NLIRLYGVVL--THPLMMVTEL 76 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCC---CccceeEEEc--CCeEEEEEEe
Confidence 46788889999987532 2 478898875322 3456678777777542 2344444333 2578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
.+|+++
T Consensus 77 ~~~~~L 82 (257)
T cd05040 77 APLGSL 82 (257)
T ss_pred cCCCcH
Confidence 998753
No 371
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.11 E-value=0.013 Score=51.98 Aligned_cols=75 Identities=13% Similarity=-0.012 Sum_probs=49.7
Q ss_pred eeeeCCcccceeEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
...++.|..+.+|+....+ + .+++|...... ...+..|+.+++.+.. -.+.+++..... .+..++++||++
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~ 88 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH---RNIVQYLGSDSE-NGFFKIFMEQVP 88 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC---CCeeeeeeeecc-CCEEEEEEecCC
Confidence 3467888889999997543 3 68888765322 2346678888777753 234445544332 467899999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 89 ~~~L 92 (268)
T cd06624 89 GGSL 92 (268)
T ss_pred CCCH
Confidence 9754
No 372
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.10 E-value=0.0048 Score=55.97 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=47.0
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
...++.|..+.+|++... +..+++|..... ....+..|...++.+.+ -.+.+++..... .+..+++|||++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~ 102 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH---ENVVDMYNSYLV-GDELWVVMEFLE 102 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC---CcHHHHHHheec-CCeEEEEEeCCC
Confidence 455778888999998764 347888876432 12345667777776643 223333333222 457899999999
Q ss_pred CCC
Q 020294 131 FGS 133 (328)
Q Consensus 131 G~~ 133 (328)
|+.
T Consensus 103 ~~~ 105 (292)
T cd06658 103 GGA 105 (292)
T ss_pred CCc
Confidence 875
No 373
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.10 E-value=0.006 Score=55.09 Aligned_cols=73 Identities=19% Similarity=0.185 Sum_probs=50.2
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
..+.++.|..+.+|++... ++ .+++|..... ....+..|++.++.+.+ -.+++++..... ....++|||
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e 81 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH---GNIVRLQDVVHS-EKRLYLVFE 81 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC---CCEeeEEEEEec-CCeEEEEEe
Confidence 3466788888999998754 33 7999987532 12346678888888854 245666655433 468899999
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
|+++
T Consensus 82 ~~~~ 85 (294)
T PLN00009 82 YLDL 85 (294)
T ss_pred cccc
Confidence 9865
No 374
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.06 E-value=0.0055 Score=55.00 Aligned_cols=54 Identities=17% Similarity=0.124 Sum_probs=31.7
Q ss_pred cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294 76 SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 76 ~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
.+++|....... ..+..|+..++.+.+ -.+++++.+... .+..++||||++|+.
T Consensus 46 ~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h---~niv~~~~~~~~-~~~~~lv~ey~~~g~ 102 (274)
T cd05076 46 RVVLKVLDPSHRDIALAFFETASLMSQVSH---IHLAFVHGVCVR-GSENIMVEEFVEHGP 102 (274)
T ss_pred eEEEEecChHHHHHHHHHHHHHHHHhcCCC---CCeeeEEEEEEe-CCceEEEEecCCCCc
Confidence 366776643211 223345555554432 346666665443 467899999999985
No 375
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.05 E-value=0.0063 Score=53.94 Aligned_cols=74 Identities=12% Similarity=0.074 Sum_probs=48.9
Q ss_pred eeeCCcccceeEEEEeC--CccEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 57 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
+.++.|..+.+|++... +..+++|..+... ...+..|++.++.+.+. .+++++..... .+..+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~~v 81 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHP---HIIRMLGATCE-DSHFNLF 81 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCC---ceehhhceecc-CCeEEEE
Confidence 45788889999998752 3478888775311 23466788888887542 34444443322 4578999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
|||.+|+.+
T Consensus 82 ~e~~~~~~L 90 (268)
T cd06630 82 VEWMAGGSV 90 (268)
T ss_pred EeccCCCcH
Confidence 999999753
No 376
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.05 E-value=0.015 Score=52.21 Aligned_cols=27 Identities=22% Similarity=0.175 Sum_probs=23.8
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||++++++.+.++|+.
T Consensus 128 ~~iiH~dlkp~nili~~~~~~kl~Dfg 154 (279)
T cd05111 128 HRMVHRNLAARNILLKSDSIVQIADFG 154 (279)
T ss_pred CCEeccccCcceEEEcCCCcEEEcCCc
Confidence 359999999999999988878899974
No 377
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.04 E-value=0.0058 Score=55.36 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=46.2
Q ss_pred eeeeeeeCCcccceeEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 53 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
..-++.++.|..+.+|++...+ ..+++|...... ...+..|...+..+..+ -.+++++..... ....+++|
T Consensus 17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~v~ 93 (296)
T cd06618 17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDC--PYIVKCYGYFIT-DSDVFICM 93 (296)
T ss_pred heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCC--CchHhhheeeec-CCeEEEEe
Confidence 3446778889999999998763 478888875321 11233344444443322 235555554432 45789999
Q ss_pred eeecC
Q 020294 127 EFIEF 131 (328)
Q Consensus 127 e~l~G 131 (328)
|++++
T Consensus 94 e~~~~ 98 (296)
T cd06618 94 ELMST 98 (296)
T ss_pred eccCc
Confidence 99765
No 378
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.02 E-value=0.0091 Score=53.53 Aligned_cols=74 Identities=11% Similarity=0.023 Sum_probs=45.9
Q ss_pred eeeeCCcccceeEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
++.+|.|..+.+|+.... ...+.+|...... ...+..|..++..+.+ -.+.+++..... .+..++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~~ 85 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH---PNIVCLLGVVTK-EQPLSM 85 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEcC-CCceEE
Confidence 345677888889987642 1368888876432 1335567766665543 234445544332 356789
Q ss_pred EEeeecCCC
Q 020294 125 IMEFIEFGS 133 (328)
Q Consensus 125 v~e~l~G~~ 133 (328)
+++|.++..
T Consensus 86 ~~e~~~~~~ 94 (283)
T cd05091 86 IFSYCSHSD 94 (283)
T ss_pred EEEcCCCCc
Confidence 999998875
No 379
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.01 E-value=0.0023 Score=59.19 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=45.5
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|....+|++... +..+++|..... ....+..|+.+++.+.+..-+.+..++..........+++|||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 89 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL 89 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence 456788888899998764 338888876431 1234556888888886321112222222211113467999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
+.|
T Consensus 90 ~~~ 92 (334)
T cd07855 90 MES 92 (334)
T ss_pred hhh
Confidence 865
No 380
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.01 E-value=0.011 Score=54.95 Aligned_cols=76 Identities=17% Similarity=0.096 Sum_probs=45.3
Q ss_pred eeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCC--CceEE
Q 020294 54 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYI 124 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~--~~~~~ 124 (328)
..+..+|.|..+.+|++... ++ .+++|..... ....+..|++.++.+.+..-+....++..+.... ...++
T Consensus 18 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 97 (343)
T cd07880 18 RDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYL 97 (343)
T ss_pred EEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEE
Confidence 34678899999999998753 34 7888976421 1234567888888885432112222222211101 24589
Q ss_pred EEeee
Q 020294 125 IMEFI 129 (328)
Q Consensus 125 v~e~l 129 (328)
+|+++
T Consensus 98 v~e~~ 102 (343)
T cd07880 98 VMPFM 102 (343)
T ss_pred EEecC
Confidence 99998
No 381
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.99 E-value=0.0031 Score=60.91 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=58.8
Q ss_pred CChhHHHHHHHhc-C---CCcceeeeeeeCCcccceeEEEEe-CCc-cEEEEecC---CCCcchHHHHHHHHHHHHhcCC
Q 020294 35 LSDDPIREWILSE-G---KATHITKICPVGGGCINLASRYGT-DAG-SFFVKTNR---SIGPSMFEGEALGLGAMYETRT 105 (328)
Q Consensus 35 ~~~~~i~~~l~~~-~---~~~~i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~---~~~~~~~~~E~~~l~~L~~~~~ 105 (328)
++..++..-++.. . +-......+.+|.|.+..||.-.- ..+ ...+|... ...++.+-.|..+|+-+.+
T Consensus 253 ~~~~~~~~~l~~v~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H--- 329 (550)
T KOG0578|consen 253 VSKEEILAKLKRVVSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHH--- 329 (550)
T ss_pred chHHHHHHHhheeccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccc---
Confidence 3444788877765 1 223556788899999999998653 233 44455442 1235677788888876643
Q ss_pred CCcccceecc-ccC-CCceEEEEeeecCCCC
Q 020294 106 IRAPRPFKVG-ALP-TGGSYIIMEFIEFGSS 134 (328)
Q Consensus 106 v~VP~~~~~~-~~~-~~~~~~v~e~l~G~~~ 134 (328)
|.++-+- ... .+.-|+||||++|+.+
T Consensus 330 ---~NiVnfl~Sylv~deLWVVMEym~ggsL 357 (550)
T KOG0578|consen 330 ---PNIVNFLDSYLVGDELWVVMEYMEGGSL 357 (550)
T ss_pred ---hHHHHHHHHhcccceeEEEEeecCCCch
Confidence 2233221 111 3567999999999865
No 382
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=96.99 E-value=0.01 Score=53.32 Aligned_cols=73 Identities=14% Similarity=0.107 Sum_probs=47.0
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 129 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l 129 (328)
.+.++.|..+.+|++.... ..+++|..... ....+..|...+..+..+ -.+++++..... ++..+++||++
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~~~~~~~~-~~~~~~~~e~~ 85 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC--PYIVKFYGALFR-EGDCWICMELM 85 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCC--CCEeeeeeEEec-CCcEEEEEecc
Confidence 4557888889999987642 37888876532 123455677777666532 245555554433 46789999997
Q ss_pred cC
Q 020294 130 EF 131 (328)
Q Consensus 130 ~G 131 (328)
++
T Consensus 86 ~~ 87 (288)
T cd06616 86 DI 87 (288)
T ss_pred cC
Confidence 75
No 383
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=96.98 E-value=0.0054 Score=55.35 Aligned_cols=73 Identities=16% Similarity=0.102 Sum_probs=46.1
Q ss_pred eeeeCCcccceeEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e 127 (328)
++.++.|....+|++.... + .+++|...... ...+..|...+..+.+ -.++.++...... .+..+++||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~~~~~~~~lv~e 86 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH---PNIVTVKEVVVGSNLDKIYMVME 86 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC---CCEEEEEEEEEecCCCcEEEEeh
Confidence 4567788888999988753 3 67888765311 1234567777777753 2345554433221 268899999
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
|+++
T Consensus 87 ~~~~ 90 (293)
T cd07843 87 YVEH 90 (293)
T ss_pred hcCc
Confidence 9976
No 384
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=96.98 E-value=0.0098 Score=55.06 Aligned_cols=74 Identities=12% Similarity=0.068 Sum_probs=44.8
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccc---cC-CCceEE
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA---LP-TGGSYI 124 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~---~~-~~~~~~ 124 (328)
-.+.++.|..+.+|++... + ..+++|..... ....+..|..+++.+.+. .+.+++.... .. ....++
T Consensus 9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHE---NIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCC---CcCchhheeecccccccceEEE
Confidence 3567888888999998653 3 37889976532 123355678778877642 2333332211 11 235689
Q ss_pred EEeeecC
Q 020294 125 IMEFIEF 131 (328)
Q Consensus 125 v~e~l~G 131 (328)
++|++++
T Consensus 86 v~e~~~~ 92 (336)
T cd07849 86 VQELMET 92 (336)
T ss_pred Eehhccc
Confidence 9999875
No 385
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=96.95 E-value=0.011 Score=53.65 Aligned_cols=77 Identities=17% Similarity=0.134 Sum_probs=45.6
Q ss_pred eeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc----CCCceE
Q 020294 55 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSY 123 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~----~~~~~~ 123 (328)
-++.++.|..+.+|+.... + ..+++|..... ....+..|++.++.+.+..-+++..+...... ..+..+
T Consensus 16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 95 (310)
T cd07865 16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFY 95 (310)
T ss_pred EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEE
Confidence 3566888899999999764 2 37888876421 12234568888888854321222222211111 024569
Q ss_pred EEEeeecC
Q 020294 124 IIMEFIEF 131 (328)
Q Consensus 124 ~v~e~l~G 131 (328)
++|||.++
T Consensus 96 lv~e~~~~ 103 (310)
T cd07865 96 LVFEFCEH 103 (310)
T ss_pred EEEcCCCc
Confidence 99999875
No 386
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=96.95 E-value=0.013 Score=53.17 Aligned_cols=75 Identities=11% Similarity=0.068 Sum_probs=46.2
Q ss_pred eeeeeeCCcccceeEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc-------CC
Q 020294 54 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-------PT 119 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-------~~ 119 (328)
.-.+.++.|..+.+|++... +..+++|..... .......|.+.++.+.+. .+.+++..... ..
T Consensus 11 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 11 EILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHP---NVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred EEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCC---CccchhhheecccccccccC
Confidence 33556888889999998764 347888876421 123456788888888543 23333322111 02
Q ss_pred CceEEEEeeecC
Q 020294 120 GGSYIIMEFIEF 131 (328)
Q Consensus 120 ~~~~~v~e~l~G 131 (328)
...+++++|.++
T Consensus 88 ~~~~lv~~~~~~ 99 (311)
T cd07866 88 GSVYMVTPYMDH 99 (311)
T ss_pred ceEEEEEecCCc
Confidence 356899999775
No 387
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=96.93 E-value=0.012 Score=52.20 Aligned_cols=75 Identities=17% Similarity=0.130 Sum_probs=47.0
Q ss_pred eeeCCcccceeEEEEeCC-c---cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc-----CCCce
Q 020294 57 CPVGGGCINLASRYGTDA-G---SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGS 122 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~-~---~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-----~~~~~ 122 (328)
+.++.|..+.||+....+ + .+.+|..... ....+..|.+.++.+.+ -.+.+++..... .....
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH---PNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEccCCcccCCCCc
Confidence 346888889999987643 2 4777876431 12345668888777743 235555543211 01356
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|+|++|+.+
T Consensus 82 ~~v~e~~~~~~l 93 (272)
T cd05075 82 VVILPFMKHGDL 93 (272)
T ss_pred EEEEEeCCCCcH
Confidence 899999998753
No 388
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.92 E-value=0.013 Score=54.25 Aligned_cols=74 Identities=16% Similarity=0.144 Sum_probs=46.7
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
-+..++.|..+.+|++... ++ .+++|.... .....+..|.++++.+.+- .+.+++..........++++|
T Consensus 14 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 14 DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHE---NIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred EEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCC---CeeeEeeeEecCCCcEEEEee
Confidence 4577888999999998754 33 788886532 1134466788888877542 233333332221346789999
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
+..+
T Consensus 91 ~~~~ 94 (328)
T cd07856 91 LLGT 94 (328)
T ss_pred hhcc
Confidence 8743
No 389
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.91 E-value=0.00093 Score=64.98 Aligned_cols=160 Identities=18% Similarity=0.177 Sum_probs=95.8
Q ss_pred CChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCc--cEEEEecCCCC------cchHHHHHHHHHHHHhcCCC
Q 020294 35 LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIG------PSMFEGEALGLGAMYETRTI 106 (328)
Q Consensus 35 ~~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~v 106 (328)
+.+.+|.++.....+.--...+..||.|..+.||...+... .+.+|.-...+ -..+-+|+.+|+.|.
T Consensus 10 lKDPeiA~LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~----- 84 (948)
T KOG0577|consen 10 LKDPEIADLFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR----- 84 (948)
T ss_pred CCCchHHHHHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-----
Confidence 56778888886664443445688899999999999887543 33344332211 234667887776653
Q ss_pred Ccccceecccc--CCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH
Q 020294 107 RAPRPFKVGAL--PTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA 184 (328)
Q Consensus 107 ~VP~~~~~~~~--~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~ 184 (328)
-|..+.+..+ .+...|+||||+=|... -|-..|+-+.-
T Consensus 85 -HPntieYkgCyLre~TaWLVMEYClGSAs---------DlleVhkKplq------------------------------ 124 (948)
T KOG0577|consen 85 -HPNTIEYKGCYLREHTAWLVMEYCLGSAS---------DLLEVHKKPLQ------------------------------ 124 (948)
T ss_pred -CCCcccccceeeccchHHHHHHHHhccHH---------HHHHHHhccch------------------------------
Confidence 4555554322 25688999999988621 23456664430
Q ss_pred HhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-cccCCchh
Q 020294 185 EHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEA 260 (328)
Q Consensus 185 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~ 260 (328)
+..|... -...+..+. ++- .-..||+|++.||||+.+.|.+.+-||+ +.+.+|+-
T Consensus 125 EvEIAAi----------------~~gaL~gLa-YLH----S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn 180 (948)
T KOG0577|consen 125 EVEIAAI----------------THGALQGLA-YLH----SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN 180 (948)
T ss_pred HHHHHHH----------------HHHHHHHHH-HHH----HhhHHhhhccccceEecCCCeeeeccccchhhcCchh
Confidence 0011110 111222222 232 2368999999999999988877777764 33444433
No 390
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=96.90 E-value=0.021 Score=50.93 Aligned_cols=77 Identities=18% Similarity=0.134 Sum_probs=48.3
Q ss_pred eeeeeeCCcccceeEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294 54 TKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~ 122 (328)
.-...++.|..+.+|+....+ ..+.+|...... ...+..|+..++.+.+ -.+.+++..... .+..
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~ 84 (277)
T cd05032 9 TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC---HHVVRLLGVVST-GQPT 84 (277)
T ss_pred eEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEcC-CCCc
Confidence 345678888999999976532 368888875321 1234456666665532 234445544332 4678
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
+++|||.+++.+
T Consensus 85 ~~v~e~~~~~~L 96 (277)
T cd05032 85 LVVMELMAKGDL 96 (277)
T ss_pred EEEEecCCCCCH
Confidence 999999998753
No 391
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=96.90 E-value=0.0038 Score=59.73 Aligned_cols=143 Identities=22% Similarity=0.230 Sum_probs=89.3
Q ss_pred eeeeCCcccceeEEEEeCCc-cEEEEecCC--CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGTDAG-SFFVKTNRS--IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~--~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
+..+|.|+...|+.-.-... +.-+|.-.. ...+.+.+|+++++.|.+. .+-+.+++... ++.-+|||||++-+
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~---~lV~l~gV~~~-~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHE---KLVKLYGVCTK-QEPIYIVTEYMPKG 286 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCccc---CeEEEEEEEec-CCceEEEEEecccC
Confidence 55678899998888766543 555554432 2346677999999999863 56677777654 34579999999887
Q ss_pred CCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHH
Q 020294 133 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 212 (328)
Q Consensus 133 ~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 212 (328)
.+ -+.|.. .. |- .+ .+.. +.....++.
T Consensus 287 sL-------l~yLr~----~~-----~~----~l--------------------~~~~-------------Ll~~a~qIa 313 (468)
T KOG0197|consen 287 SL-------LDYLRT----RE-----GG----LL--------------------NLPQ-------------LLDFAAQIA 313 (468)
T ss_pred cH-------HHHhhh----cC-----CC----cc--------------------chHH-------------HHHHHHHHH
Confidence 53 222222 10 00 00 0000 112223334
Q ss_pred HHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c-ccCCchh
Q 020294 213 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA 260 (328)
Q Consensus 213 ~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~-~~G~p~~ 260 (328)
+.+. +++ ...+||+||-..|||++++....|=||. + ..++-+|
T Consensus 314 eGM~-YLe----s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 314 EGMA-YLE----SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred HHHH-HHH----hCCccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 4333 444 4579999999999999988878899985 3 3555554
No 392
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=96.89 E-value=0.017 Score=51.08 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=43.5
Q ss_pred eeCCcccceeEEEEeCC-----ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 58 PVGGGCINLASRYGTDA-----GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~~~-----~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.++.|..+.+|+....+ ..+++|..... . ...+..|...++.+.+ -.+.+++......++..+++|+|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSH---PNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCC---CCcceEEEEeecCCCCcEEEEec
Confidence 46778888999876421 15778876432 1 2334456666655532 12333444322224578999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
.+++.+
T Consensus 79 ~~~~~L 84 (262)
T cd05058 79 MKHGDL 84 (262)
T ss_pred CCCCCH
Confidence 988753
No 393
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.88 E-value=0.0025 Score=57.75 Aligned_cols=65 Identities=14% Similarity=0.028 Sum_probs=44.2
Q ss_pred cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcC
Q 020294 76 SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG 152 (328)
Q Consensus 76 ~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~ 152 (328)
.|.||+-.. +.+..+-+|++.+..-..+ ..+-+++..-++ +...|+|||.+.|+++ |.++|.-.
T Consensus 105 EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh--~nilqLiefFEd-d~~FYLVfEKm~GGpl----------LshI~~~~ 171 (463)
T KOG0607|consen 105 EYAVKIIDKQPGHSRSRVFREVETFYQCQGH--KNILQLIEFFED-DTRFYLVFEKMRGGPL----------LSHIQKRK 171 (463)
T ss_pred hhhhhhhhcCCchHHHHHHHHHHHHHHhcCC--ccHHHHHHHhcc-cceEEEEEecccCchH----------HHHHHHhh
Confidence 677777643 3456677888887766554 334455544332 5789999999999986 77777755
Q ss_pred C
Q 020294 153 K 153 (328)
Q Consensus 153 ~ 153 (328)
.
T Consensus 172 ~ 172 (463)
T KOG0607|consen 172 H 172 (463)
T ss_pred h
Confidence 3
No 394
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.84 E-value=0.012 Score=52.55 Aligned_cols=72 Identities=15% Similarity=0.118 Sum_probs=46.7
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+.++.|..+.+|+..... ..+++|..... ....+..|+..++.+.+ -.+++++..... .+..++++|+
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~ 79 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH---PNIVKLLDVIHT-ERKLYLVFEY 79 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC---CCHHHHHhhhhc-CCceEEEecC
Confidence 3457778889999987753 48888987642 12345567777776643 234444444332 3678999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
.++
T Consensus 80 ~~~ 82 (282)
T cd07829 80 CDM 82 (282)
T ss_pred cCc
Confidence 875
No 395
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=96.84 E-value=0.013 Score=53.47 Aligned_cols=59 Identities=10% Similarity=0.118 Sum_probs=35.8
Q ss_pred eCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 72 TDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 72 ~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
..+..+++|..... ....+..|++.++.+.+..-++ ++..... .+..+++|||++++.+
T Consensus 23 ~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~---~~~~~~~-~~~~~~~~e~~~~~~l 86 (314)
T cd08216 23 PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILP---YVTSFIV-DSELYVVSPLMAYGSC 86 (314)
T ss_pred CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhh---hhheeec-CCeEEEEEeccCCCCH
Confidence 33458888886532 2345778888888886421112 2222111 4578999999998753
No 396
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=96.83 E-value=0.01 Score=54.69 Aligned_cols=68 Identities=10% Similarity=0.040 Sum_probs=43.3
Q ss_pred cccceeEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294 62 GCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 62 G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
|....+|+.... +..+.+|+..... ...++.|..+++.+.+. .+.+++..... .+..++++|+++|+.
T Consensus 11 ~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~---niv~~~~~~~~-~~~~~~v~e~~~~~~ 85 (328)
T cd08226 11 CNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHP---NIMTSWTVFTT-GSWLWVISPFMAYGS 85 (328)
T ss_pred cCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCC---CcceEeeeEec-CCceEEEEecccCCC
Confidence 366689998763 3478888875321 24466677776666542 34455554433 457899999999874
No 397
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.82 E-value=0.0048 Score=56.80 Aligned_cols=73 Identities=15% Similarity=0.191 Sum_probs=46.6
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~ 124 (328)
.+.++.|..+.+|++...+ ..+++|..... ....+..|...++.+.+. .+.+++...... ....++
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHE---NIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCc---chhhhhhhhcccCcccccceEE
Confidence 4568888899999998653 47888876532 134567788888877532 233344332221 136799
Q ss_pred EEeeecC
Q 020294 125 IMEFIEF 131 (328)
Q Consensus 125 v~e~l~G 131 (328)
+|+|+++
T Consensus 82 v~e~~~~ 88 (330)
T cd07834 82 VTELMET 88 (330)
T ss_pred Eecchhh
Confidence 9998764
No 398
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.82 E-value=0.0076 Score=57.14 Aligned_cols=75 Identities=15% Similarity=0.065 Sum_probs=51.9
Q ss_pred eeeCCcccceeEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 57 CPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
+.+|.|....||+..... | .|-+|.-... ....+..|+++|+.|..+ -.+-.++..-.+ ....++|||.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~h--pniv~l~~~~e~-~~~~~lvmEL 117 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGH--PNIVQLKDAFED-PDSVYLVMEL 117 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCC--CCEEEEEEEEEc-CCeEEEEEEe
Confidence 678999999999998754 4 6777776431 125788999999999753 123333333222 3577999999
Q ss_pred ecCCCC
Q 020294 129 IEFGSS 134 (328)
Q Consensus 129 l~G~~~ 134 (328)
+.|+.+
T Consensus 118 ~~GGeL 123 (382)
T KOG0032|consen 118 CEGGEL 123 (382)
T ss_pred cCCchH
Confidence 999853
No 399
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=96.80 E-value=0.0066 Score=55.37 Aligned_cols=143 Identities=21% Similarity=0.221 Sum_probs=85.5
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-C----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.+..|+.|...-|||.... ++ -+.||.-... . +-..-+|+.+|....+..-+.|-.|+ +|.. -+..|+|||
T Consensus 80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVV-vG~~-~d~iy~VMe 157 (419)
T KOG0663|consen 80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVV-VGSN-MDKIYIVME 157 (419)
T ss_pred HHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEE-eccc-cceeeeeHH
Confidence 4667889999999999753 23 4556654421 1 22234788888777643223444444 3322 356899999
Q ss_pred eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294 128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 207 (328)
Q Consensus 128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 207 (328)
|++-. +.. -||....+ |+. + .. +-.
T Consensus 158 ~~EhD--------Lks---l~d~m~q~---F~~------~-------------------ev----------------K~L 182 (419)
T KOG0663|consen 158 YVEHD--------LKS---LMETMKQP---FLP------G-------------------EV----------------KTL 182 (419)
T ss_pred HHHhh--------HHH---HHHhccCC---Cch------H-------------------HH----------------HHH
Confidence 98863 111 23443321 220 0 00 112
Q ss_pred HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c-ccCCch
Q 020294 208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNE 259 (328)
Q Consensus 208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~-~~G~p~ 259 (328)
..++++.+..+ ...-++|+||++.|+|....|...|-||. + .||.|.
T Consensus 183 ~~QlL~glk~l-----H~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 183 MLQLLRGLKHL-----HDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred HHHHHHHHHHH-----hhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 22334433322 23469999999999999988989999985 4 599983
No 400
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.79 E-value=0.015 Score=53.80 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=55.3
Q ss_pred eeeeeCCcccceeEEEEeCCc---cEEEEecCCC---CcchHHHHHHHHHHHHh-cCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTDAG---SFFVKTNRSI---GPSMFEGEALGLGAMYE-TRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~~---~~vlK~~~~~---~~~~~~~E~~~l~~L~~-~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
-...+|.|..+.+|.+...+. .+++|.-... ....+..|..++..+.. ..+..+|.++..+....+..|+||+
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~ 101 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS 101 (322)
T ss_pred EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence 356689999999999987543 5888887542 12268889999999985 2246899999988422567899988
Q ss_pred ee
Q 020294 128 FI 129 (328)
Q Consensus 128 ~l 129 (328)
-+
T Consensus 102 l~ 103 (322)
T KOG1164|consen 102 LL 103 (322)
T ss_pred cc
Confidence 53
No 401
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=96.78 E-value=0.006 Score=53.43 Aligned_cols=27 Identities=22% Similarity=0.171 Sum_probs=24.0
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||+++.++...++|+.
T Consensus 104 ~~i~H~dlkp~Nil~~~~~~~~l~df~ 130 (237)
T cd05576 104 EGIVCRDLNPNNILLDDRGHIQLTYFS 130 (237)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEeccc
Confidence 469999999999999988888899964
No 402
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.76 E-value=0.02 Score=52.14 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=47.0
Q ss_pred eeeeeeeCCcccceeEEEEeC-Cc-----cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCcccceeccccCCCce
Q 020294 53 ITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~ 122 (328)
...++.++.|..+.+|++... ++ .+++|....... ..+..|...++.+.+ -.+.+++.... ....
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~niv~~~~~~~--~~~~ 83 (303)
T cd05110 9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH---PHLVRLLGVCL--SPTI 83 (303)
T ss_pred ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcccEEEEEc--CCCc
Confidence 445667899999999998652 23 367787654221 234567776666643 23444444332 2356
Q ss_pred EEEEeeecCCCC
Q 020294 123 YIIMEFIEFGSS 134 (328)
Q Consensus 123 ~~v~e~l~G~~~ 134 (328)
++++++.+++.+
T Consensus 84 ~~v~e~~~~g~l 95 (303)
T cd05110 84 QLVTQLMPHGCL 95 (303)
T ss_pred eeeehhcCCCCH
Confidence 789999888653
No 403
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.76 E-value=0.0027 Score=62.52 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=24.4
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.|||++.++...|+||.
T Consensus 286 ~gIiHrDLKP~NILl~~~~~vkL~DFG 312 (501)
T PHA03210 286 KKLIHRDIKLENIFLNCDGKIVLGDFG 312 (501)
T ss_pred CCeecCCCCHHHEEECCCCCEEEEeCC
Confidence 469999999999999988888999974
No 404
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=96.74 E-value=0.0058 Score=57.70 Aligned_cols=74 Identities=14% Similarity=0.059 Sum_probs=41.6
Q ss_pred eeCCcccceeEEE-EeCCccEE-EEecCC-CC-----c----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 58 PVGGGCINLASRY-GTDAGSFF-VKTNRS-IG-----P----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 58 ~i~~G~~n~~y~v-~~~~~~~v-lK~~~~-~~-----~----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.+|.|..+.||+. +....+|| +||..- .. . ....+|.++.+.|-+ -.+.+.|.+-.......+.|
T Consensus 470 LLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDH---pRIVKlYDyfslDtdsFCTV 546 (775)
T KOG1151|consen 470 LLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDH---PRIVKLYDYFSLDTDSFCTV 546 (775)
T ss_pred HhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCc---ceeeeeeeeeeeccccceee
Confidence 3567777888884 44556665 477541 10 0 112345555554422 23344444433324678999
Q ss_pred EeeecCCCC
Q 020294 126 MEFIEFGSS 134 (328)
Q Consensus 126 ~e~l~G~~~ 134 (328)
+||++|..+
T Consensus 547 LEYceGNDL 555 (775)
T KOG1151|consen 547 LEYCEGNDL 555 (775)
T ss_pred eeecCCCch
Confidence 999999764
No 405
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.69 E-value=0.0012 Score=58.68 Aligned_cols=71 Identities=17% Similarity=0.096 Sum_probs=45.1
Q ss_pred eeeCCcccceeEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccc--c-CCC-ceEEE
Q 020294 57 CPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA--L-PTG-GSYII 125 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~--~-~~~-~~~~v 125 (328)
+.||.|..+.+|++++ .+| .+++|--.-. ....+.+|..+|+.|.+ |.++.+.. . .+. --+++
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H------pNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH------PNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC------chHHHHHHHhhhccchhhHHH
Confidence 4578999999999986 455 4555543221 23456678888887753 44443322 1 123 36899
Q ss_pred EeeecCCC
Q 020294 126 MEFIEFGS 133 (328)
Q Consensus 126 ~e~l~G~~ 133 (328)
||++++++
T Consensus 99 mE~c~~GD 106 (375)
T KOG0591|consen 99 MELCDAGD 106 (375)
T ss_pred HHhhcccC
Confidence 99999875
No 406
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=96.68 E-value=0.018 Score=51.10 Aligned_cols=76 Identities=17% Similarity=0.137 Sum_probs=50.2
Q ss_pred eeeeeCCcccceeEEEEeC------CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 55 KICPVGGGCINLASRYGTD------AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~------~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
-.+.||.|....+|+.+.. ...++||..... . ...+..|++.++.+ ++ -.+.+++..... .+..++
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h--~ni~~~~g~~~~-~~~~~l 78 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RH--PNIVKLYGFCIE-NEPLFL 78 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SB--TTBE-EEEEEES-SSSEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cc--cccccccccccc-cccccc
Confidence 3567899999999998876 126888988542 1 24566777777777 32 356666665542 456899
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
|+||++++.+
T Consensus 79 v~e~~~~g~L 88 (259)
T PF07714_consen 79 VMEYCPGGSL 88 (259)
T ss_dssp EEE--TTEBH
T ss_pred cccccccccc
Confidence 9999998753
No 407
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=96.67 E-value=0.023 Score=51.31 Aligned_cols=74 Identities=16% Similarity=0.157 Sum_probs=45.5
Q ss_pred eeeeCCcccceeEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC---------C
Q 020294 56 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---------T 119 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~---------~ 119 (328)
.+.++.|..+.+|+..... + .+++|..... ....+..|.+.++.+.+. .+.+++...... .
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~---~i~~~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHR---NIVNLKEIVTDKQDALDFKKDK 88 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCC---CeeeeeheecCcchhhhccccC
Confidence 3557788889999988743 3 6777876531 123456788888777532 233333322110 2
Q ss_pred CceEEEEeeecCC
Q 020294 120 GGSYIIMEFIEFG 132 (328)
Q Consensus 120 ~~~~~v~e~l~G~ 132 (328)
+..++++||++|.
T Consensus 89 ~~~~lv~e~~~~~ 101 (302)
T cd07864 89 GAFYLVFEYMDHD 101 (302)
T ss_pred CcEEEEEcccCcc
Confidence 3678999998873
No 408
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.65 E-value=0.028 Score=51.84 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=45.8
Q ss_pred eeeeCCcccceeEEEEeCC---c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc---CCCceE
Q 020294 56 ICPVGGGCINLASRYGTDA---G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGSY 123 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~---~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~---~~~~~~ 123 (328)
.+.++.|..+.+|++.... + .+++|..+.. ....+..|.+.++.+.++. .+++.+..... .....+
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~--~iv~~~~~~~~~~~~~~~~~ 82 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHK--NITCLYDMDIVFPGNFNELY 82 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCC--ChheeeeeeeeccccCCcEE
Confidence 4557888889999998642 3 6888876531 1234567888888886542 34455543211 123567
Q ss_pred EEEeeecC
Q 020294 124 IIMEFIEF 131 (328)
Q Consensus 124 ~v~e~l~G 131 (328)
+++++.++
T Consensus 83 ~~~e~~~~ 90 (332)
T cd07857 83 LYEELMEA 90 (332)
T ss_pred EEEecccC
Confidence 88887764
No 409
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=96.65 E-value=0.039 Score=49.29 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=48.5
Q ss_pred eeeeCCcccceeEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 56 ICPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.+.++.|....+|+....+ ..+++|...... ...+..|...++.+.+ ..+.+++..........+++
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~~~~~~~~~ 87 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH---QNILPILHVCIEDGEPPFVL 87 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEecCCCCCEEE
Confidence 3557888889999987543 367778765321 2345667777777733 34555555443323578999
Q ss_pred EeeecCCC
Q 020294 126 MEFIEFGS 133 (328)
Q Consensus 126 ~e~l~G~~ 133 (328)
+++.+++.
T Consensus 88 ~~~~~~~~ 95 (280)
T cd05043 88 YPYMNWGN 95 (280)
T ss_pred EEcCCCCc
Confidence 99998765
No 410
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=96.65 E-value=0.011 Score=52.40 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=45.0
Q ss_pred eeeCCcccceeEEEEeCC-c--------cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 57 CPVGGGCINLASRYGTDA-G--------SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~-~--------~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
+.+|.|..+.||++.... + .+++|...... .+.+..|...++.+.+ -.+.+++..... .+..++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH---KHLVLNYGVCVC-GDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC---CChhheeeEEEe-CCCcEE
Confidence 357788889999986532 1 36666654321 2345566666666543 234445544332 357899
Q ss_pred EEeeecCCCC
Q 020294 125 IMEFIEFGSS 134 (328)
Q Consensus 125 v~e~l~G~~~ 134 (328)
||||++|+.+
T Consensus 77 v~e~~~~g~L 86 (258)
T cd05078 77 VQEYVKFGSL 86 (258)
T ss_pred EEecCCCCcH
Confidence 9999999754
No 411
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=96.64 E-value=0.016 Score=52.86 Aligned_cols=74 Identities=9% Similarity=-0.043 Sum_probs=45.1
Q ss_pred eeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 55 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
.++.++.|..+.+|++... ++ .+++|..... . ...+..|.+.++.+.+. .+.+++..... ....+++|
T Consensus 19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~ 94 (308)
T cd06634 19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP---NTIQYRGCYLR-EHTAWLVM 94 (308)
T ss_pred HHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCC---CcccEEEEEEc-CCeeEEEE
Confidence 3556777888899998763 33 6778876421 1 12345677777777542 23333333222 35789999
Q ss_pred eeecCC
Q 020294 127 EFIEFG 132 (328)
Q Consensus 127 e~l~G~ 132 (328)
||+.|.
T Consensus 95 e~~~~~ 100 (308)
T cd06634 95 EYCLGS 100 (308)
T ss_pred EccCCC
Confidence 999764
No 412
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=96.64 E-value=0.0087 Score=57.73 Aligned_cols=92 Identities=16% Similarity=0.031 Sum_probs=56.5
Q ss_pred ChhHHHHHHHhcCCCcceeeeeeeCCcccceeEEEEe-CCc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCc
Q 020294 36 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGT-DAG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRA 108 (328)
Q Consensus 36 ~~~~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~V 108 (328)
+..+|++-+.-... .+|..-+.+|.|+...||--.- ..| .+.+|+-.. .+...++.|+++|+.+.+- |+..
T Consensus 550 s~~qiqe~vd~stv-YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HP-GiV~ 627 (888)
T KOG4236|consen 550 SNCQIQENVDISTV-YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHP-GIVN 627 (888)
T ss_pred cchhhhhhhhHHHH-HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCC-CeeE
Confidence 44455554421111 2566667789999999997443 334 667776532 3457789999999988652 2211
Q ss_pred ccceeccccCCCceEEEEeeecCC
Q 020294 109 PRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 109 P~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
+--.-++ .++.|+|||.+.|.
T Consensus 628 --le~M~ET-~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 628 --LECMFET-PERVFVVMEKLHGD 648 (888)
T ss_pred --EEEeecC-CceEEEEehhhcch
Confidence 1111122 46889999999986
No 413
>PHA02882 putative serine/threonine kinase; Provisional
Probab=96.60 E-value=0.022 Score=51.71 Aligned_cols=27 Identities=33% Similarity=0.416 Sum_probs=24.1
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.|||+++++.+.|+||.
T Consensus 145 ~~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 145 HGISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred CCeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 469999999999999988878899985
No 414
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.58 E-value=0.029 Score=53.08 Aligned_cols=144 Identities=22% Similarity=0.154 Sum_probs=84.9
Q ss_pred ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccce---eccccCC---CceEEE
Q 020294 52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF---KVGALPT---GGSYII 125 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~---~~~~~~~---~~~~~v 125 (328)
+|.=++.||.|-...|||=.-..+.+.||++...+.....+|.++++..- ++-+.++ +.|.... ..-|+|
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvm----LRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVM----LRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHH----hccchhhhhhhccccCCCceEEEEEe
Confidence 45567788999999999987777789999997644455668888887442 1222333 2332212 355888
Q ss_pred EeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHH
Q 020294 126 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 205 (328)
Q Consensus 126 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~ 205 (328)
.+|=+-+.+ -+.|-+ +... .+..++.+..
T Consensus 288 TdYHe~GSL-------~DyL~r-~tv~-----------------------------------~~~ml~LalS-------- 316 (513)
T KOG2052|consen 288 TDYHEHGSL-------YDYLNR-NTVT-----------------------------------TEGMLKLALS-------- 316 (513)
T ss_pred eecccCCcH-------HHHHhh-ccCC-----------------------------------HHHHHHHHHH--------
Confidence 888666532 111111 0000 0111111110
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
...-+.....+++.. +.+|.+-|+||++.|||+.+++...|=|..
T Consensus 317 -~AsGLaHLH~eI~GT-qgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 317 -IASGLAHLHMEIVGT-QGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred -HhhhHHHHHHHHhcC-CCCchhhccccccccEEEccCCcEEEeece
Confidence 011122222334444 579999999999999999998877887753
No 415
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.57 E-value=0.023 Score=52.60 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=44.8
Q ss_pred eeeCCcccceeEEEEeC--CccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEee
Q 020294 57 CPVGGGCINLASRYGTD--AGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF 128 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~--~~~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~ 128 (328)
+.++.|....+|+.... +..+++|.... .....+..|+..++.+.++ -.+.+++...... ....+++||+
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~lv~e~ 90 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH--PNIVKLLNVIKAENDKDIYLVFEY 90 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC--CCccceeeeeccCCCceEEEEecc
Confidence 44677777889998754 23788886532 1223456788888888443 2344444433221 2357999999
Q ss_pred ecC
Q 020294 129 IEF 131 (328)
Q Consensus 129 l~G 131 (328)
+++
T Consensus 91 ~~~ 93 (337)
T cd07852 91 MET 93 (337)
T ss_pred ccc
Confidence 875
No 416
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.54 E-value=0.022 Score=56.96 Aligned_cols=27 Identities=26% Similarity=0.328 Sum_probs=23.0
Q ss_pred CceeccCCCCCCeeecCC-CCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKN-GEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~-~~~~iID~~ 252 (328)
..++|+|++|.|||++++ +...|+||.
T Consensus 274 ~gIiHRDLKP~NILl~~~~~~~KL~DFG 301 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSGSFKIIDLG 301 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCCcEEEEeCC
Confidence 479999999999999864 567899975
No 417
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=96.53 E-value=0.024 Score=60.28 Aligned_cols=74 Identities=19% Similarity=0.218 Sum_probs=49.2
Q ss_pred eeeeCCcccceeEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294 56 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
...++.|....||+.... ++ .+++|...... .....|++.++.+.+ -.+.+++.+... .+..++||||++|+.
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~l~~l~H---pnIv~~~~~~~~-~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVN-SIPSSEIADMGKLQH---PNIVKLIGLCRS-EKGAYLIHEYIEGKN 769 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCc-cccHHHHHHHhhCCC---CCcceEEEEEEc-CCCCEEEEeCCCCCc
Confidence 345788999999999863 34 78888765321 222356666666633 346666766543 457899999999975
Q ss_pred C
Q 020294 134 S 134 (328)
Q Consensus 134 ~ 134 (328)
+
T Consensus 770 L 770 (968)
T PLN00113 770 L 770 (968)
T ss_pred H
Confidence 3
No 418
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=96.50 E-value=0.031 Score=48.05 Aligned_cols=65 Identities=14% Similarity=0.039 Sum_probs=43.3
Q ss_pred ceeEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294 65 NLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 65 n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
..+|++...+ ..+++|...... ...+..|.+.++.+.. -.+++++..... ....++++|+++++.
T Consensus 3 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~~ 73 (244)
T smart00220 3 GKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH---PNIVRLYDVFED-EDKLYLVMEYCDGGD 73 (244)
T ss_pred eEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC---CcHHHHHhheee-CCEEEEEEeCCCCCC
Confidence 4678877653 478999986432 3567788888877732 234555544332 367899999999874
No 419
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=96.50 E-value=0.023 Score=50.34 Aligned_cols=74 Identities=15% Similarity=0.146 Sum_probs=43.9
Q ss_pred eeeeeCCcccceeEEEEe-CCc-cEEEE-ecCCC---C-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGT-DAG-SFFVK-TNRSI---G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~-~~~-~~vlK-~~~~~---~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
..+.+|+|....||+-+. ..| .+.+| +.... + ....-+|+..|+.+.+. .|-.++..-.. .+.--+|+|
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~---nIi~LiD~F~~-~~~l~lVfE 81 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHP---NIIELIDVFPH-KSNLSLVFE 81 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCc---chhhhhhhccC-CCceEEEEE
Confidence 356689999999999764 344 45554 33321 1 12234799888888753 23333332211 356688999
Q ss_pred eecCC
Q 020294 128 FIEFG 132 (328)
Q Consensus 128 ~l~G~ 132 (328)
|++-.
T Consensus 82 fm~td 86 (318)
T KOG0659|consen 82 FMPTD 86 (318)
T ss_pred ecccc
Confidence 87763
No 420
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.49 E-value=0.058 Score=53.10 Aligned_cols=27 Identities=22% Similarity=0.318 Sum_probs=24.1
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++|+|++|.||+++.++...|+|+.
T Consensus 328 ~~ivHrDLKp~NILl~~~~~~kL~DFG 354 (507)
T PLN03224 328 IGIVHRDIKPENLLVTVDGQVKIIDFG 354 (507)
T ss_pred CCeecCCCchHhEEECCCCcEEEEeCc
Confidence 469999999999999988888999974
No 421
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=96.47 E-value=0.017 Score=52.22 Aligned_cols=148 Identities=18% Similarity=0.226 Sum_probs=86.6
Q ss_pred eeeeCCcccceeEEEEeC-CccE-EEEecC-CCC----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD-AGSF-FVKTNR-SIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~~~~-vlK~~~-~~~----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
+..+|+|....||+.... .|.. .+|.+- .++ ....-+|+++|+.|.+..-+..=.++.. ...-++|+||
T Consensus 7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr----krklhLVFE~ 82 (396)
T KOG0593|consen 7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR----KRKLHLVFEY 82 (396)
T ss_pred hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh----cceeEEEeee
Confidence 456889999999999864 4554 446553 221 1223479999998876422222223322 3578999999
Q ss_pred ecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHH
Q 020294 129 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 208 (328)
Q Consensus 129 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 208 (328)
++-.- |-.|...+. |.+ . +.+.. .+
T Consensus 83 ~dhTv-----------L~eLe~~p~-----G~~---------------~--------~~vk~----------------~l 107 (396)
T KOG0593|consen 83 CDHTV-----------LHELERYPN-----GVP---------------S--------ELVKK----------------YL 107 (396)
T ss_pred cchHH-----------HHHHHhccC-----CCC---------------H--------HHHHH----------------HH
Confidence 98752 222322221 211 0 11111 11
Q ss_pred HHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c----ccCCchhhhhhh-hh
Q 020294 209 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C----YYGHNEAEFGMS-WC 267 (328)
Q Consensus 209 ~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~----~~G~p~~DLa~~-~~ 267 (328)
-+++..+. +. ..-..||+|++|.|||+..++++.+.||. + .-|+...|-..+ |+
T Consensus 108 ~Q~l~ai~-~c----Hk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWY 167 (396)
T KOG0593|consen 108 YQLLKAIH-FC----HKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWY 167 (396)
T ss_pred HHHHHHhh-hh----hhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhc
Confidence 11222211 11 23459999999999999999999999963 2 257777777654 54
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.47 E-value=0.018 Score=60.17 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=43.6
Q ss_pred eeeee-eCCcccceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEEEeee
Q 020294 54 TKICP-VGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFI 129 (328)
Q Consensus 54 ~~v~~-i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e~l 129 (328)
..|+. +|.|....||+.+..+| .++||+-.+...-.+-.=-+++..|.. -..|-+......- .+..++|++|.
T Consensus 700 ~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~---~~~~~~~~~~~a~~~~~~S~lv~ey~ 776 (974)
T KOG1166|consen 700 FCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKP---QMLPSIMHISSAHVFQNASVLVSEYS 776 (974)
T ss_pred EEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhch---hhhcchHHHHHHHccCCcceeeeecc
Confidence 34544 58889999999998777 788999876432111111223333431 1122222221100 35679999998
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+-+.+
T Consensus 777 ~~Gtl 781 (974)
T KOG1166|consen 777 PYGTL 781 (974)
T ss_pred ccccH
Confidence 76653
No 423
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.45 E-value=0.015 Score=53.90 Aligned_cols=73 Identities=15% Similarity=0.161 Sum_probs=44.6
Q ss_pred eeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC----CCceEE
Q 020294 56 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~----~~~~~~ 124 (328)
...++.|..+.+|++... + ..+++|..... ....+..|...++.+.+. .+.+++...... ....++
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---ni~~~~~~~~~~~~~~~~~~~l 86 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHE---NVIAIKDIMPPPHREAFNDVYI 86 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCC---CccchHHheecccccccCcEEE
Confidence 557888899999998754 2 37888876431 123345678777777432 233333322111 134799
Q ss_pred EEeeecC
Q 020294 125 IMEFIEF 131 (328)
Q Consensus 125 v~e~l~G 131 (328)
++||+.+
T Consensus 87 v~e~~~~ 93 (337)
T cd07858 87 VYELMDT 93 (337)
T ss_pred EEeCCCC
Confidence 9999865
No 424
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.42 E-value=0.025 Score=52.55 Aligned_cols=78 Identities=14% Similarity=0.096 Sum_probs=44.2
Q ss_pred eeeeeeeCCcccceeEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceecccc-C-CCceE
Q 020294 53 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-P-TGGSY 123 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~-~-~~~~~ 123 (328)
-..+..++.|..+.+|++.... ..+++|..... ....+..|...++.+.+..-+++...+..+.. . ....+
T Consensus 17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 96 (343)
T cd07851 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVY 96 (343)
T ss_pred eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEE
Confidence 3446778889999999987643 37888876431 12334567777777643211112221211110 0 12478
Q ss_pred EEEeeec
Q 020294 124 IIMEFIE 130 (328)
Q Consensus 124 ~v~e~l~ 130 (328)
++++++.
T Consensus 97 lv~e~~~ 103 (343)
T cd07851 97 LVTHLMG 103 (343)
T ss_pred EEEecCC
Confidence 9999874
No 425
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=96.34 E-value=0.066 Score=49.78 Aligned_cols=50 Identities=20% Similarity=0.104 Sum_probs=33.6
Q ss_pred eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHh
Q 020294 53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYE 102 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~ 102 (328)
-.-++.++.|..+.+|++... ++ .+++|..... ....+..|...++.+.+
T Consensus 19 y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h 75 (345)
T cd07877 19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 75 (345)
T ss_pred eEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCC
Confidence 344678888999999998653 34 7888876432 12345567877887754
No 426
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=96.34 E-value=0.01 Score=55.44 Aligned_cols=71 Identities=24% Similarity=0.286 Sum_probs=41.9
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEcccc--ccCCchhhhhhhhhcC-C--ChhhHHHHhhhCCCCCCHHHHHHHHHH
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPAC--YYGHNEAEFGMSWCAG-F--GGSFYNSYFEVMPKQPGFEKRRDLYML 297 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~~--~~G~p~~DLa~~~~~~-~--~~~f~~~Y~~~~pl~~~~~~r~~ly~l 297 (328)
.-+++|+||+..|||+|.++...|-||.. .|.+.- +-.++|+. + .++.++|---..|--++|.--+-||.|
T Consensus 171 knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtL 246 (668)
T KOG0611|consen 171 KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTL 246 (668)
T ss_pred hccceecccchhheeecCCCCeeeeccchhhhhcccc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHH
Confidence 55799999999999999998889999753 232221 22223422 1 234444433233434566555555544
No 427
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=96.32 E-value=0.059 Score=50.00 Aligned_cols=75 Identities=15% Similarity=0.053 Sum_probs=45.1
Q ss_pred eeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC-----CCc
Q 020294 54 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 121 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-----~~~ 121 (328)
..+..++.|..+.+|+.... + ..+++|..... ....+..|.++++.+.+. .+.+++...... ...
T Consensus 18 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 18 TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHE---NVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCC---CccchhheecccccCCCCce
Confidence 34677888888999998753 3 47888876421 123356788888877542 233333322110 124
Q ss_pred eEEEEeeecC
Q 020294 122 SYIIMEFIEF 131 (328)
Q Consensus 122 ~~~v~e~l~G 131 (328)
.+++++++.+
T Consensus 95 ~~lv~e~~~~ 104 (342)
T cd07879 95 FYLVMPYMQT 104 (342)
T ss_pred EEEEeccccc
Confidence 5889998753
No 428
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.28 E-value=0.0081 Score=50.31 Aligned_cols=75 Identities=19% Similarity=0.127 Sum_probs=60.1
Q ss_pred eeeeeeeCCcccceeEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 53 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
+.....++.|..+.+|...-..+..++|+.+.+. +..++.|+++|+-++.. -..|++|.++.. ++.|||++|
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~--~~~p~vy~yg~~-----~i~me~i~G 96 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGE--GVTPEVYFYGED-----FIRMEYIDG 96 (201)
T ss_pred hhhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhc--CCCceEEEechh-----hhhhhhhcC
Confidence 3345557788999999988777788999987653 56689999999999874 579999999854 777999999
Q ss_pred CCC
Q 020294 132 GSS 134 (328)
Q Consensus 132 ~~~ 134 (328)
.++
T Consensus 97 ~~L 99 (201)
T COG2112 97 RPL 99 (201)
T ss_pred cch
Confidence 864
No 429
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=96.27 E-value=0.021 Score=55.97 Aligned_cols=136 Identities=18% Similarity=0.149 Sum_probs=83.2
Q ss_pred ceeeeeeeCCcccceeEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
++.-.++||.|-..+|||-.-. |.+.||+..-. ....|+.|+.+|+.-++. =-++..|-.-.....||+
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~wh-GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~-----NIlLFMG~~~~p~~AIiT 466 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWH-GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHE-----NILLFMGACMNPPLAIIT 466 (678)
T ss_pred Hhhccceeccccccceeecccc-cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchh-----hheeeehhhcCCceeeee
Confidence 5666788999999999996432 56778876422 245577888887755432 223444432233449999
Q ss_pred eeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHH
Q 020294 127 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 206 (328)
Q Consensus 127 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~ 206 (328)
.|++|..+ -..+|..... |. +...+ +
T Consensus 467 qwCeGsSL----------Y~hlHv~etk---fd----------------------------m~~~i-------------d 492 (678)
T KOG0193|consen 467 QWCEGSSL----------YTHLHVQETK---FD----------------------------MNTTI-------------D 492 (678)
T ss_pred hhccCchh----------hhhccchhhh---hh----------------------------HHHHH-------------H
Confidence 99999865 3344443321 11 11111 1
Q ss_pred HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..+++...+. +|- ...+||.||++.||++++++.+.|=||.
T Consensus 493 IAqQiaqGM~-YLH----AK~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 493 IAQQIAQGMD-YLH----AKNIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred HHHHHHHhhh-hhh----hhhhhhhhccccceEEccCCcEEEeccc
Confidence 1122222222 332 3579999999999999988777888874
No 430
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.22 E-value=0.024 Score=56.18 Aligned_cols=72 Identities=17% Similarity=0.190 Sum_probs=46.8
Q ss_pred eCCcccceeEEEEe-CCc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeec
Q 020294 59 VGGGCINLASRYGT-DAG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 130 (328)
Q Consensus 59 i~~G~~n~~y~v~~-~~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~ 130 (328)
+|.|.++.|=.-+. ..| ..++|+-+.. .+..+++|+.+++.|.+ -+|=++|.+... ...-|+|+||++
T Consensus 20 LG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H---pnVl~LydVwe~-~~~lylvlEyv~ 95 (786)
T KOG0588|consen 20 LGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH---PNVLRLYDVWEN-KQHLYLVLEYVP 95 (786)
T ss_pred ccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC---CCeeeeeeeecc-CceEEEEEEecC
Confidence 45566555433221 234 4567776532 25678999999999976 356667766543 357799999999
Q ss_pred CCCC
Q 020294 131 FGSS 134 (328)
Q Consensus 131 G~~~ 134 (328)
|+.+
T Consensus 96 gGEL 99 (786)
T KOG0588|consen 96 GGEL 99 (786)
T ss_pred Cchh
Confidence 9853
No 431
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.11 E-value=0.08 Score=49.13 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=48.2
Q ss_pred ceeeeeeeCCcccceeEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCcccceeccccC--------
Q 020294 52 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-------- 118 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-------- 118 (328)
.-.-+++++.|..+.+|+.... + ..+++|..... ....+..|+++++.+.+. .+.+++......
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHD---NIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCC---cchhhHhhhccccccccccc
Confidence 4555788999999999998763 3 37888876432 223466788888877432 344444321110
Q ss_pred -----CCceEEEEeeecC
Q 020294 119 -----TGGSYIIMEFIEF 131 (328)
Q Consensus 119 -----~~~~~~v~e~l~G 131 (328)
....+++|||+++
T Consensus 83 ~~~~~~~~~~lv~e~~~~ 100 (342)
T cd07854 83 GSLTELNSVYIVQEYMET 100 (342)
T ss_pred ccccccceEEEEeecccc
Confidence 1246899999875
No 432
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.04 E-value=0.12 Score=44.43 Aligned_cols=77 Identities=12% Similarity=-0.009 Sum_probs=52.0
Q ss_pred eeeeeeCCcccceeEEEEeCCccEEEEecCCCC-------------------cchHHHHHHHHHHHH-hc--CCCCcccc
Q 020294 54 TKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------------------PSMFEGEALGLGAMY-ET--RTIRAPRP 111 (328)
Q Consensus 54 ~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~-------------------~~~~~~E~~~l~~L~-~~--~~v~VP~~ 111 (328)
....+++.|..-.+|.--. +...++|+..+.. ......|..-+..+. .. ...++|++
T Consensus 4 ~~~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 4 SESDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCCcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 3456677888777777532 3467888876543 355677888777777 33 23478888
Q ss_pred eeccccCCCceEEEEeeecCC
Q 020294 112 FKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 112 ~~~~~~~~~~~~~v~e~l~G~ 132 (328)
+..-.+ +-...+|+|.+...
T Consensus 83 ~G~veT-~~G~Glv~e~I~d~ 102 (199)
T PF10707_consen 83 YGFVET-NLGLGLVVELIRDA 102 (199)
T ss_pred eEEEec-CCceEEEEEEEECC
Confidence 887766 45668888887654
No 433
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=95.97 E-value=0.12 Score=45.75 Aligned_cols=74 Identities=15% Similarity=0.086 Sum_probs=44.6
Q ss_pred eeeCCcccceeEEEEeC----C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccC--C---Cc
Q 020294 57 CPVGGGCINLASRYGTD----A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP--T---GG 121 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~----~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~---~~ 121 (328)
+.++.|..+.+|++... . ..+++|...... .+.+..|...++.+.+ -.+.+.+...... . ..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH---PNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC---CCcceEEEEEccCCCCCcccc
Confidence 35778888999998642 1 268888775421 2335567777776643 2355555543221 1 13
Q ss_pred eEEEEeeecCCC
Q 020294 122 SYIIMEFIEFGS 133 (328)
Q Consensus 122 ~~~v~e~l~G~~ 133 (328)
.+++++|.+++.
T Consensus 82 ~~~~~~~~~~~~ 93 (273)
T cd05074 82 PMVILPFMKHGD 93 (273)
T ss_pred eEEEEecCCCCc
Confidence 467888888765
No 434
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=95.95 E-value=0.045 Score=53.57 Aligned_cols=74 Identities=15% Similarity=0.129 Sum_probs=45.8
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
+..|+.|....|...... ...+.+|+..... ...+.+|+++++.|.+- .+-+++.+-.+ ...-|+||||
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HP---nIvkl~~v~~t-~~~lylV~ey 136 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHP---NIVKLFSVIET-EATLYLVMEY 136 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCc---ceeeeeeeeee-cceeEEEEEe
Confidence 345677777777766543 3488999876421 23356777777766431 23344444333 4578999999
Q ss_pred ecCCC
Q 020294 129 IEFGS 133 (328)
Q Consensus 129 l~G~~ 133 (328)
..|+.
T Consensus 137 a~~ge 141 (596)
T KOG0586|consen 137 ASGGE 141 (596)
T ss_pred ccCch
Confidence 99863
No 435
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=95.93 E-value=0.054 Score=47.75 Aligned_cols=74 Identities=15% Similarity=-0.012 Sum_probs=42.9
Q ss_pred eeeCCcccceeEEEEeCC--ccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEE
Q 020294 57 CPVGGGCINLASRYGTDA--GSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 126 (328)
Q Consensus 57 ~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~ 126 (328)
+.++.|..+.+|++.... ..+.+|+.... ....+..|..+++.+.+ -.+++++..... ....++++
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~ 81 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH---PAIVKFHASFLE-RDAFCIIT 81 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC---CcHHHHHHHHhc-CCceEEEE
Confidence 568888999999987543 23444443211 11224456666665533 234444443322 35689999
Q ss_pred eeecCCCC
Q 020294 127 EFIEFGSS 134 (328)
Q Consensus 127 e~l~G~~~ 134 (328)
||++|..+
T Consensus 82 e~~~~~~l 89 (260)
T cd08222 82 EYCEGRDL 89 (260)
T ss_pred EeCCCCCH
Confidence 99999753
No 436
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=95.88 E-value=0.04 Score=51.61 Aligned_cols=78 Identities=13% Similarity=0.032 Sum_probs=49.6
Q ss_pred ceeeeeeeCCcccceeEEEEeCC----c-cEEEEec-CCCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEE
Q 020294 52 HITKICPVGGGCINLASRYGTDA----G-SFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 125 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~----~-~~vlK~~-~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v 125 (328)
.-.-+.+||.|..+.||.-+.-. + .+.+|.. .-..+..+..|.++|..+... ..|-.+...-.. .+...+|
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~--~ni~~~~~~~rn-nd~v~iv 113 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGS--DNIIKLNGCFRN-NDQVAIV 113 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccc--hhhhcchhhhcc-CCeeEEE
Confidence 44567889999999999865422 2 3445544 334577888999999888654 222222222111 4678999
Q ss_pred EeeecCC
Q 020294 126 MEFIEFG 132 (328)
Q Consensus 126 ~e~l~G~ 132 (328)
++|++-.
T Consensus 114 lp~~~H~ 120 (418)
T KOG1167|consen 114 LPYFEHD 120 (418)
T ss_pred ecccCcc
Confidence 9987764
No 437
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=95.84 E-value=0.042 Score=50.42 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=29.8
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccc--c--------ccCCchhhhhhh
Q 020294 227 CLLHGDLWSGNISSDKNGEPVILDPA--C--------YYGHNEAEFGMS 265 (328)
Q Consensus 227 ~LiHgDl~~~Nil~~~~~~~~iID~~--~--------~~G~p~~DLa~~ 265 (328)
.=+|||||.+.||+.++ ...+|||+ . .-.+|+-|++-+
T Consensus 285 ~RvHGDLHLgQVLvt~g-~~~liDFEGEPsRpl~err~~~sPlrDvAgl 332 (438)
T COG3281 285 QRVHGDLHLGQVLVTPG-RALLIDFEGEPSRPLDERRAPDSPLRDVAGL 332 (438)
T ss_pred HHHhccceehheeeeCC-cEEEEecCCCCCCChhhccCCCCchHHHHHH
Confidence 45899999999999884 47899974 2 137899999843
No 438
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.78 E-value=0.13 Score=48.79 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=46.3
Q ss_pred eeeeCCcccceeEEEEe-CCc-cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccc-c-CCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGT-DAG-SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGA-L-PTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~-~~~-~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~-~-~~~~~~~v~e 127 (328)
.+.||.|.+..||+-.+ +.+ .+-+|+..- ...+.+++|...+..+. -|.++.+.. + -+..-|+||.
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~------HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID------HPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC------CCCcceEEEEEEecceeEEeeh
Confidence 34578899999999776 334 444565431 22466778887776553 345554332 1 1457899999
Q ss_pred eecCCC
Q 020294 128 FIEFGS 133 (328)
Q Consensus 128 ~l~G~~ 133 (328)
++.|+.
T Consensus 105 fMa~GS 110 (516)
T KOG0582|consen 105 FMAGGS 110 (516)
T ss_pred hhcCCc
Confidence 999985
No 439
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.69 E-value=0.025 Score=51.88 Aligned_cols=37 Identities=24% Similarity=0.334 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCC
Q 020294 91 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 133 (328)
Q Consensus 91 ~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~ 133 (328)
++|..-|..+... |+|||.|+... .+++||.||....
T Consensus 333 EkEmhNL~RMq~~-GlpcP~vV~lk-----khvLVMsFiGd~~ 369 (531)
T KOG2269|consen 333 EKEMHNLSRMQKH-GLPCPQVVKLK-----KHVLVMSFIGDQG 369 (531)
T ss_pred HHHHHHHHHHHhc-CCCCCceeeee-----cceEEEEeecCCC
Confidence 4566666777776 89999999876 5699999987653
No 440
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=95.45 E-value=0.048 Score=53.27 Aligned_cols=132 Identities=15% Similarity=0.130 Sum_probs=75.4
Q ss_pred eeeeCCcccceeEEEEeCC-ccE-EEEecCCCCc-----chHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 56 ICPVGGGCINLASRYGTDA-GSF-FVKTNRSIGP-----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~-~~~-vlK~~~~~~~-----~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+-||.|....||+-+... ..+ .+|.-....+ .-++.|+++++.|.+- .|-+.+..-++ ....|+|+||
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHp---niv~m~esfEt-~~~~~vVte~ 82 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHP---NIVEMLESFET-SAHLWVVTEY 82 (808)
T ss_pred HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCc---chhhHHHhhcc-cceEEEEehh
Confidence 3457899999999977543 333 3454433222 2377889888877542 22233322222 3567999999
Q ss_pred ecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHH
Q 020294 129 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 208 (328)
Q Consensus 129 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 208 (328)
..|. +|.+... + |..|. +.+ ++..
T Consensus 83 a~g~---------------L~~il~~--------d---~~lpE--------------e~v----------------~~~a 106 (808)
T KOG0597|consen 83 AVGD---------------LFTILEQ--------D---GKLPE--------------EQV----------------RAIA 106 (808)
T ss_pred hhhh---------------HHHHHHh--------c---cCCCH--------------HHH----------------HHHH
Confidence 8772 3333321 0 11110 000 1122
Q ss_pred HHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 209 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 209 ~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..++..+-. + ...+++|+|++|.|||+++++...+.||.
T Consensus 107 ~~LVsaL~y-L----hs~rilhrd~kPqniLl~~~~~~KlcdFg 145 (808)
T KOG0597|consen 107 YDLVSALYY-L----HSNRILHRDMKPQNILLEKGGTLKLCDFG 145 (808)
T ss_pred HHHHHHHHH-H----HhcCcccccCCcceeeecCCCceeechhh
Confidence 223333332 2 24589999999999999998888899963
No 441
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=95.42 E-value=0.042 Score=53.81 Aligned_cols=81 Identities=16% Similarity=0.096 Sum_probs=59.8
Q ss_pred CCcceeeeeeeCCcccceeEEEEeCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 49 KATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 49 ~~~~i~~v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
+...+.=+++||+|....+-...+..+ ...+|+-+++ .+..|.+|+++|..|++ -.|-+++.++.. ++...
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh---PNIveLvGVC~~-DePic 611 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKH---PNIVELLGVCVQ-DDPLC 611 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCC---CCeeEEEeeeec-CCchH
Confidence 334566688999999999999998875 6777887653 24668889998888832 356677776543 45678
Q ss_pred EEEeeecCCC
Q 020294 124 IIMEFIEFGS 133 (328)
Q Consensus 124 ~v~e~l~G~~ 133 (328)
+|+||.+-+.
T Consensus 612 mI~EYmEnGD 621 (807)
T KOG1094|consen 612 MITEYMENGD 621 (807)
T ss_pred HHHHHHhcCc
Confidence 9999988764
No 442
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=95.31 E-value=0.18 Score=49.56 Aligned_cols=150 Identities=13% Similarity=0.090 Sum_probs=85.4
Q ss_pred eeeeeeeCCcccceeEEEEeCCc--cEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCcccceeccccCC
Q 020294 53 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT 119 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~~~--~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~ 119 (328)
-+.++++|.|....|.......+ .+|+|.-... ....+-.|+++|..|.++..-.+-+++..-++ +
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd-d 641 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED-D 641 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec-C
Confidence 35688899999999988776544 5677876431 11234579999999986532234444443332 4
Q ss_pred CceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHH-HhhhHHHHHHHHhh
Q 020294 120 GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKLALDQ 198 (328)
Q Consensus 120 ~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~-~~~l~~~~~~~~~~ 198 (328)
+..|++||- .|..+ +| |. |+. +.++.+
T Consensus 642 d~yyl~te~-hg~gI-----DL----------------Fd----------------------~IE~kp~m~E-------- 669 (772)
T KOG1152|consen 642 DYYYLETEV-HGEGI-----DL----------------FD----------------------FIEFKPRMDE-------- 669 (772)
T ss_pred CeeEEEecC-CCCCc-----ch----------------hh----------------------hhhccCccch--------
Confidence 677777762 33211 00 11 110 001110
Q ss_pred CCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc--cccCCchhhhh
Q 020294 199 YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA--CYYGHNEAEFG 263 (328)
Q Consensus 199 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~--~~~G~p~~DLa 263 (328)
.+.+....++....++ -....++|+|++-.||+++.+|-..+|||. +..-..-+|+-
T Consensus 670 ---~eAk~IFkQV~agi~h-----lh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f 728 (772)
T KOG1152|consen 670 ---PEAKLIFKQVVAGIKH-----LHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVF 728 (772)
T ss_pred ---HHHHHHHHHHHhcccc-----ccccCceecccccccEEEecCCeEEEeeccchhhhcCCCccee
Confidence 0001122233332222 235689999999999999999988999984 33444445654
No 443
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.05 E-value=0.2 Score=49.84 Aligned_cols=134 Identities=17% Similarity=0.180 Sum_probs=80.3
Q ss_pred eeeeCCcccceeEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 56 ICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
+.-+|-|....|+..... +.-|.+|.-.. ++.+....|.+++....++ ++ .-.++..-.+ ...-|+|||
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~H-PF-L~~L~~~fQT-~~~l~fvme 449 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRH-PF-LVNLFSCFQT-KEHLFFVME 449 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccC-Ce-Eeeccccccc-CCeEEEEEE
Confidence 455688999999998864 33677787653 2345566788888777643 22 1122222122 467899999
Q ss_pred eecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHH
Q 020294 128 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 207 (328)
Q Consensus 128 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 207 (328)
|+.|+.. +|..... .|. ..-.-||++
T Consensus 450 y~~Ggdm-------------~~~~~~~--~F~-----------------e~rarfyaA---------------------- 475 (694)
T KOG0694|consen 450 YVAGGDL-------------MHHIHTD--VFS-----------------EPRARFYAA---------------------- 475 (694)
T ss_pred ecCCCcE-------------EEEEecc--ccc-----------------HHHHHHHHH----------------------
Confidence 9999842 2222210 111 000112221
Q ss_pred HHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294 208 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC 253 (328)
Q Consensus 208 ~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~~ 253 (328)
+++-.+. +| ....+|++||+.+|||.|.+|-..|.|+..
T Consensus 476 --ev~l~L~-fL----H~~~IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 476 --EVVLGLQ-FL----HENGIIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred --HHHHHHH-HH----HhcCceeeecchhheEEcccCcEEeccccc
Confidence 1222222 22 245799999999999999999889999853
No 444
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=94.88 E-value=0.065 Score=52.41 Aligned_cols=72 Identities=19% Similarity=0.219 Sum_probs=49.5
Q ss_pred ceeeeeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCceEEEEeee
Q 020294 52 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFI 129 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~~~~v~e~l 129 (328)
+|.+++.+|.|....||+=+..+..+.||.-+ +.-+.++ ++|++ +.-|.++.+.... ..-.+|||||+
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~netVAVKKV~----elkETdI---KHLRk---LkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLHNETVAVKKVR----ELKETDI---KHLRK---LKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred HhhhhhhhccCcccceeeeeccCceehhHHHh----hhhhhhH---HHHHh---ccCcceeeEeeeecCCceeEEeeecc
Confidence 78889999999999999988888877777643 2222334 45543 3456677654321 34568999999
Q ss_pred cCCC
Q 020294 130 EFGS 133 (328)
Q Consensus 130 ~G~~ 133 (328)
+-+.
T Consensus 195 a~Gq 198 (904)
T KOG4721|consen 195 AQGQ 198 (904)
T ss_pred cccc
Confidence 8764
No 445
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=94.83 E-value=0.052 Score=47.75 Aligned_cols=30 Identities=33% Similarity=0.490 Sum_probs=26.3
Q ss_pred CCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294 224 VEPCLLHGDLWSGNISSDKNGEPVILDPAC 253 (328)
Q Consensus 224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~~ 253 (328)
..+...|+|++|+||++.+.+.++++|+.+
T Consensus 146 ~~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 146 KEPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred cCCcccccCCCcceeEecCCCceEEEeccC
Confidence 456899999999999999888899999753
No 446
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.38 E-value=0.024 Score=55.96 Aligned_cols=28 Identities=29% Similarity=0.395 Sum_probs=23.9
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
...+||+||+.||||++-+|...+-||+
T Consensus 148 s~~iIHRDLKAGNiL~TldGdirLADFG 175 (1187)
T KOG0579|consen 148 SQNIIHRDLKAGNILLTLDGDIRLADFG 175 (1187)
T ss_pred hcchhhhhccccceEEEecCcEeeeccc
Confidence 3479999999999999988877787864
No 447
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=93.98 E-value=0.15 Score=44.52 Aligned_cols=73 Identities=14% Similarity=0.096 Sum_probs=48.8
Q ss_pred eeeeCCcccceeEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccc--cC---------------
Q 020294 56 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA--LP--------------- 118 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~--~~--------------- 118 (328)
+...++|..-.+..+.++++.+|+|..+.. ..|.-. ..|+...++|+|..--... ..
T Consensus 4 ~i~~s~s~~~~~~F~~s~~~a~ViK~s~ti-----~~E~~~-~~La~~LgVpiPq~rvi~~~~~E~~e~~~~L~~a~~~~ 77 (238)
T cd05124 4 AIDLSDSGVFGALFVESESGAIVVKSSPNI-----ASEYFL-SKLAKILGLPIPQMRVLEWNSSEFTEMSENLLKASSED 77 (238)
T ss_pred EEEecCCceEEEEEEcCCCcEEEEEcCccH-----HHHHHH-HHHHHHhCCCCCceeeeecCCHHHHHHHHHHHHHHhcc
Confidence 344566776777788888899999998643 344432 4456666889887553222 10
Q ss_pred -----------CCceEEEEeeecCCCC
Q 020294 119 -----------TGGSYIIMEFIEFGSS 134 (328)
Q Consensus 119 -----------~~~~~~v~e~l~G~~~ 134 (328)
....+++|||++|.++
T Consensus 78 ~~~~~~i~~el~~~~flimeYv~G~~l 104 (238)
T cd05124 78 ECLERRITLELEKAYLLIMEYVPGITL 104 (238)
T ss_pred hhHHHHHHHHHhhhheeeeeecCCccc
Confidence 1237999999999976
No 448
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=93.95 E-value=0.22 Score=41.83 Aligned_cols=73 Identities=18% Similarity=0.084 Sum_probs=44.5
Q ss_pred eeeeeCCcccceeEEEEeCC-cc-EEEEecCC---C--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 55 KICPVGGGCINLASRYGTDA-GS-FFVKTNRS---I--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~~~-~~-~vlK~~~~---~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
+.+.||+|...+||+-...+ +. ..+|.-+- + -+...-+|+.+|+.|.+.. +-+++..-.. +..-.+|+|
T Consensus 6 kmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkn---ivrl~dvlhs-dkkltlvfe 81 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN---IVRLHDVLHS-DKKLTLVFE 81 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcc---eeehhhhhcc-CceeEEeHH
Confidence 56789999999999987643 33 34455432 1 1344558999999998753 3333332211 345566777
Q ss_pred eecC
Q 020294 128 FIEF 131 (328)
Q Consensus 128 ~l~G 131 (328)
|++-
T Consensus 82 ~cdq 85 (292)
T KOG0662|consen 82 FCDQ 85 (292)
T ss_pred HhhH
Confidence 6543
No 449
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=93.91 E-value=0.034 Score=51.24 Aligned_cols=49 Identities=8% Similarity=0.005 Sum_probs=34.4
Q ss_pred ceeeeeeeCCcccceeEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHH
Q 020294 52 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMY 101 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~ 101 (328)
.+...+.+|.|..+.||+.... ++.+.+|.--++. ..-.+|.++|+.+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-r~knrEl~im~~l~ 75 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-RYKNRELQIMRKLD 75 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-CcCcHHHHHHHhcC
Confidence 4566778899999999997653 4588888765432 23347888888543
No 450
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=93.64 E-value=0.36 Score=46.13 Aligned_cols=72 Identities=21% Similarity=0.143 Sum_probs=45.6
Q ss_pred eeeeCCcccceeEEEEe--CCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCcccceeccccC--CCc-eEEE
Q 020294 56 ICPVGGGCINLASRYGT--DAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGG-SYII 125 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~--~~~-~~~v 125 (328)
++.+|.|....++.+.- ++..||+|.-.-. .+.....|..+++. +.-|-++.+.... ++. -+|+
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~------~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSK------LLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHh------ccCCCeeeeccchhcCCceEEEE
Confidence 45577788777776654 3458999976521 12223445554443 4567777665432 455 8999
Q ss_pred EeeecCCC
Q 020294 126 MEFIEFGS 133 (328)
Q Consensus 126 ~e~l~G~~ 133 (328)
|+|++|+.
T Consensus 83 m~Y~eGg~ 90 (426)
T KOG0589|consen 83 MEYCEGGD 90 (426)
T ss_pred EeecCCCC
Confidence 99999985
No 451
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=93.51 E-value=0.044 Score=47.01 Aligned_cols=28 Identities=25% Similarity=0.327 Sum_probs=25.7
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
...+||+|.+|+|||++.+|++.|.||.
T Consensus 167 kL~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 167 KLSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred HhhhhhccCCcceEEEccCCcEEEcccc
Confidence 4579999999999999999999999986
No 452
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=93.44 E-value=0.32 Score=44.36 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=47.6
Q ss_pred eeeeCCcccceeEEEE-eCC-c----cEEEEecCCC----C-cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEE
Q 020294 56 ICPVGGGCINLASRYG-TDA-G----SFFVKTNRSI----G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 124 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~-~~~-~----~~vlK~~~~~----~-~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~ 124 (328)
+..|+.|....||+.. .+. + .|.+|..... + .....+|...++.|.+..-+..-+|+-.. +...++
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---d~~v~l 105 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---DKKVWL 105 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---CceEEE
Confidence 4458899999999973 322 1 4667766432 1 23345899999999875334444444432 468899
Q ss_pred EEeeecC
Q 020294 125 IMEFIEF 131 (328)
Q Consensus 125 v~e~l~G 131 (328)
+++|.+-
T Consensus 106 ~fdYAEh 112 (438)
T KOG0666|consen 106 LFDYAEH 112 (438)
T ss_pred Eehhhhh
Confidence 9999765
No 453
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.23 E-value=0.13 Score=45.01 Aligned_cols=29 Identities=24% Similarity=0.212 Sum_probs=24.5
Q ss_pred CCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 224 VEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..+.+||+|++|.|+|.+.++..-|=||.
T Consensus 141 h~k~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 141 HLKRVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred ccCCcccCCCCHHHhccCCCCCeeccCCC
Confidence 35689999999999999988877787754
No 454
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=92.91 E-value=0.39 Score=47.75 Aligned_cols=74 Identities=22% Similarity=0.147 Sum_probs=45.2
Q ss_pred eeeeCCcccceeEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 56 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
-..+|||+...||.=.-.. =.+.||.-..+ ..+.|-+|+++++.+.+- ..-+++.++.. +...|||+||+.-
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHp---NLVqLLGVCT~-EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP---NLVQLLGVCTH-EPPFYIITEFMCY 347 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCc---cHHHHhhhhcc-CCCeEEEEecccC
Confidence 4457888888888632111 02233333222 235577899998888652 34556666654 5678999999876
Q ss_pred CC
Q 020294 132 GS 133 (328)
Q Consensus 132 ~~ 133 (328)
+.
T Consensus 348 GN 349 (1157)
T KOG4278|consen 348 GN 349 (1157)
T ss_pred cc
Confidence 64
No 455
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=92.84 E-value=0.49 Score=42.43 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=39.9
Q ss_pred ceeeeeeeCCc-ccceeEEEEeCCc----cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCccccee--cccc-------
Q 020294 52 HITKICPVGGG-CINLASRYGTDAG----SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFK--VGAL------- 117 (328)
Q Consensus 52 ~i~~v~~i~~G-~~n~~y~v~~~~~----~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~--~~~~------- 117 (328)
.+.+++...+| .++-+|.+.+.++ .+|+|..+. +..|.- ...|+...++|+|..-- ....
T Consensus 26 ~l~sv~~s~~g~ns~gv~fv~~f~~~~~~avViK~s~t-----~~~E~~-~s~La~~Lgv~~P~~Rii~~~~~E~~e~~~ 99 (275)
T PF09192_consen 26 SLSSVHHSEHGVNSGGVFFVATFSGSKEEAVVIKFSST-----IQQEVF-ASELARWLGVPTPQMRIIESSSSEFQEMSE 99 (275)
T ss_dssp -CCCEEEEEE-STTS-EEEEEETTE----EEEEE--TT-----HHHHHH-HHHHHHHCT-----EEEEESSSHHHHHHHH
T ss_pred HhhhHHhhccccCCCCEEEEEEcCCCceEEEEEecCCc-----hHHHHH-HHHHHHHhCCCCCceeeeecCCHHHHHHHH
Confidence 56677777766 2445777777766 899999864 445544 34566667888887543 2210
Q ss_pred ---------C----------CCceEEEEeeecCCCC
Q 020294 118 ---------P----------TGGSYIIMEFIEFGSS 134 (328)
Q Consensus 118 ---------~----------~~~~~~v~e~l~G~~~ 134 (328)
+ +...+++|||++|.++
T Consensus 100 ~l~~a~~~~~~l~~~i~~el~~a~~liMeyv~G~~L 135 (275)
T PF09192_consen 100 ALLFATSNDDELGDFICSELDKAFFLIMEYVPGKPL 135 (275)
T ss_dssp HHH----HH-SSS-HHHHHCT-SEEEEEE---EEES
T ss_pred HHHhhcccchHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 0 2356899999999775
No 456
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=92.53 E-value=0.17 Score=49.99 Aligned_cols=41 Identities=27% Similarity=0.268 Sum_probs=29.0
Q ss_pred HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeec-CCCCeEEEccc
Q 020294 207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD-KNGEPVILDPA 252 (328)
Q Consensus 207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~-~~~~~~iID~~ 252 (328)
+..++...+..+ ...+++|+||+|+|||++ +.+..-|+||.
T Consensus 420 w~~~lv~Av~~L-----H~~gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 420 WAAELVSAVDYL-----HEQGVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred HHHHHHHHHHHH-----HhcCeeecCCChhheeecCCCCcEEEEEec
Confidence 444555444433 236899999999999994 55667899963
No 457
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=92.38 E-value=0.17 Score=47.96 Aligned_cols=60 Identities=20% Similarity=0.241 Sum_probs=44.1
Q ss_pred CCCCceeccCCCCCCeeecCCC-CeEEEc---c-ccccCCchhhhhhhh----h----cCCC--------hhhHHHHhhh
Q 020294 223 NVEPCLLHGDLWSGNISSDKNG-EPVILD---P-ACYYGHNEAEFGMSW----C----AGFG--------GSFYNSYFEV 281 (328)
Q Consensus 223 ~~~~~LiHgDl~~~Nil~~~~~-~~~iID---~-~~~~G~p~~DLa~~~----~----~~~~--------~~f~~~Y~~~ 281 (328)
..++++|+||+|.+|.=.-.+. ...++| | +++.|+++|||-.+. . .+++ ..|.++|.+.
T Consensus 40 ~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wDl~Rla~Si~laa~~~gl~~~~~~~~~~~~~~~Y~~~ 119 (385)
T PF10009_consen 40 SGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWDLKRLATSIVLAARENGLSDKDARKAVRAFLEGYREA 119 (385)
T ss_pred CCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999775442 245666 6 589999999998542 1 3454 3688999766
Q ss_pred C
Q 020294 282 M 282 (328)
Q Consensus 282 ~ 282 (328)
.
T Consensus 120 l 120 (385)
T PF10009_consen 120 L 120 (385)
T ss_pred H
Confidence 4
No 458
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=91.92 E-value=0.053 Score=52.44 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=24.1
Q ss_pred CCceeccCCCCCCeeecCCC-CeEEEcccc
Q 020294 225 EPCLLHGDLWSGNISSDKNG-EPVILDPAC 253 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~-~~~iID~~~ 253 (328)
...++|.|++|+|||+.++. .+.|+||..
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCcc
Confidence 56899999999999998765 368999853
No 459
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=91.67 E-value=0.18 Score=45.17 Aligned_cols=39 Identities=28% Similarity=0.221 Sum_probs=30.8
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc-cc---cCCchhhhh
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA-CY---YGHNEAEFG 263 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~---~G~p~~DLa 263 (328)
...++|+||+|.|||++++....|-||. ++ -|....||-
T Consensus 141 a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelC 183 (411)
T KOG0599|consen 141 ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELC 183 (411)
T ss_pred HhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhc
Confidence 3479999999999999998888999963 33 466666664
No 460
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.36 E-value=0.21 Score=44.60 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=24.9
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
...++|+|++|||+|++.|.+..|.||.
T Consensus 174 sA~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 174 TANILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred hcchhhccCCCccEEeccCceEEecccc
Confidence 4579999999999999988888999975
No 461
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.10 E-value=2.6 Score=42.84 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=45.0
Q ss_pred eCCcccceeEEEEeCCc--cEEEEecCC-C--CcchHHHHHHHHHHHHhcCCCCcccceeccccC-CCceEEEEeeecCC
Q 020294 59 VGGGCINLASRYGTDAG--SFFVKTNRS-I--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFG 132 (328)
Q Consensus 59 i~~G~~n~~y~v~~~~~--~~vlK~~~~-~--~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~~~~~v~e~l~G~ 132 (328)
+|.|....||--+.-+. +.++|--+. . ...-+-.|++..+.|.+.. +-+-+ |... +|..-|-||.++|+
T Consensus 583 LGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkN---IVrYL--Gs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 583 LGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKN---IVRYL--GSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred eecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHh---HHHHh--hccCCCCeEEEEeecCCCC
Confidence 57788888888765332 667775542 1 1234668899888887642 22222 2222 46667889999998
Q ss_pred CC
Q 020294 133 SS 134 (328)
Q Consensus 133 ~~ 134 (328)
.+
T Consensus 658 SL 659 (1226)
T KOG4279|consen 658 SL 659 (1226)
T ss_pred cH
Confidence 63
No 462
>PF13575 DUF4135: Domain of unknown function (DUF4135)
Probab=90.77 E-value=3.4 Score=39.01 Aligned_cols=74 Identities=22% Similarity=0.197 Sum_probs=41.8
Q ss_pred ceeeeee-eCCccc--ceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcC-----CCCcccceeccccCCCce
Q 020294 52 HITKICP-VGGGCI--NLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETR-----TIRAPRPFKVGALPTGGS 122 (328)
Q Consensus 52 ~i~~v~~-i~~G~~--n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~-----~v~VP~~~~~~~~~~~~~ 122 (328)
.+++|+. .|.-.. ..|-+++.++| ++|-|--+-.....+ .+++++|.+.. .+|+|+++..+. .
T Consensus 44 ~i~~I~~~~GD~H~~Gr~V~~l~f~~g~kivYKPRsl~~d~~f---~~l~~~ln~~~~~~~~~l~~~~~l~~g~-----~ 115 (370)
T PF13575_consen 44 KITSIEFGLGDTHNGGRSVAILEFSSGKKIVYKPRSLSIDKAF---NDLLEWLNEKNGTPSLDLPTPKVLDRGD-----G 115 (370)
T ss_pred CceEecCCCCCcCCCCceEEEEEECCCCEEEEeCcccHHHHHH---HHHHHHHhhhccccccccccceeeeccC-----c
Confidence 5666654 222222 37888888887 777775432222222 45567776653 245556665432 3
Q ss_pred EEEEeeecCCC
Q 020294 123 YIIMEFIEFGS 133 (328)
Q Consensus 123 ~~v~e~l~G~~ 133 (328)
|--+|||+-.+
T Consensus 116 YgW~EfI~~~~ 126 (370)
T PF13575_consen 116 YGWQEFIEHEP 126 (370)
T ss_pred ceeEEEecCCC
Confidence 66678877654
No 463
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.48 E-value=0.88 Score=46.47 Aligned_cols=78 Identities=17% Similarity=0.115 Sum_probs=54.0
Q ss_pred ceeeeeeeCCcccceeEEEEeCCc-------cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294 52 HITKICPVGGGCINLASRYGTDAG-------SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 120 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~~~-------~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~ 120 (328)
.+.-.+.+|.|....||.-...+. -+.||.-... ....|++|++++..|.+. .|-+++.+... +.
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~---nIVrLlGVC~~-~~ 562 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHP---NIVRLLGVCRE-GD 562 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCC---CeEEEEEEEcc-CC
Confidence 445567789999999998765421 2344554332 245689999988888653 57788887764 45
Q ss_pred ceEEEEeeecCCC
Q 020294 121 GSYIIMEFIEFGS 133 (328)
Q Consensus 121 ~~~~v~e~l~G~~ 133 (328)
..++|+||+.-++
T Consensus 563 P~~MvFEYm~~GD 575 (774)
T KOG1026|consen 563 PLCMVFEYMDHGD 575 (774)
T ss_pred eeEEEEEeccccc
Confidence 6799999998764
No 464
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=90.32 E-value=0.21 Score=44.76 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=24.3
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
.-+++|+|.+|.|||+|+.|+..+.||.
T Consensus 210 KH~viHRDvKPSNILlDe~GniKlCDFG 237 (391)
T KOG0983|consen 210 KHGVIHRDVKPSNILLDERGNIKLCDFG 237 (391)
T ss_pred hcceeecccCccceEEccCCCEEeeccc
Confidence 5589999999999999998887787764
No 465
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=90.15 E-value=0.21 Score=43.57 Aligned_cols=30 Identities=40% Similarity=0.583 Sum_probs=26.6
Q ss_pred CCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294 224 VEPCLLHGDLWSGNISSDKNGEPVILDPAC 253 (328)
Q Consensus 224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~~ 253 (328)
.....+|||..|+|||.|+.|-..++||.+
T Consensus 160 ~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 160 ENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred cCCCeecCCCChhheeecCCCCEEecChhh
Confidence 467899999999999999999889999753
No 466
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=90.12 E-value=1.3 Score=43.90 Aligned_cols=81 Identities=25% Similarity=0.356 Sum_probs=46.6
Q ss_pred HHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCC-CCeEEEccccccCCchhhhhhhhh-----c-C-C-ChhhH--
Q 020294 207 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPACYYGHNEAEFGMSWC-----A-G-F-GGSFY-- 275 (328)
Q Consensus 207 ~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~-~~~~iID~~~~~G~p~~DLa~~~~-----~-~-~-~~~f~-- 275 (328)
|-.++++.+. ++. ...|.+||+||+.+||++..+ |.+.|=| |+.+.. + . . +++|+
T Consensus 148 W~RQILkGL~-yLH--s~~PPIIHRDLKCDNIFinG~~G~VKIGD-----------LGLAtl~r~s~aksvIGTPEFMAP 213 (632)
T KOG0584|consen 148 WCRQILKGLV-YLH--SQDPPIIHRDLKCDNIFVNGNLGEVKIGD-----------LGLATLLRKSHAKSVIGTPEFMAP 213 (632)
T ss_pred HHHHHHHHhh-hhh--cCCCCccccccccceEEEcCCcCceeecc-----------hhHHHHhhccccceeccCccccCh
Confidence 3344444444 333 246789999999999999765 4455644 433211 1 1 1 23454
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 020294 276 NSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF 307 (328)
Q Consensus 276 ~~Y~~~~pl~~~~~~r~~ly~l~~~l~~~~~~ 307 (328)
|-|++ ++-+.+++|.+.+=+..+.++
T Consensus 214 EmYEE------~YnE~VDVYaFGMCmLEMvT~ 239 (632)
T KOG0584|consen 214 EMYEE------NYNELVDVYAFGMCMLEMVTS 239 (632)
T ss_pred HHHhh------hcchhhhhhhhhHHHHHHHhc
Confidence 55653 344678889877554445554
No 467
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=89.54 E-value=2.1 Score=39.65 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=43.3
Q ss_pred eeCCcccceeEEEEe--CCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC-ceEEEEe
Q 020294 58 PVGGGCINLASRYGT--DAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIME 127 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~--~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~-~~~~v~e 127 (328)
.||.|.....|.=+. .+..+.+|+-+.. ....+.-|.+.++.|... .-+|.+|+++.. | .-.+|++
T Consensus 35 KIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~--~GIP~vYYFGqe--G~~NiLVid 104 (449)
T KOG1165|consen 35 KIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGT--EGIPQVYYFGQE--GKYNILVID 104 (449)
T ss_pred ccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCC--CCCCceeeeccc--cchhhhhhh
Confidence 466666554443221 2346778887743 346688999999999864 568999999874 3 3345555
No 468
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=89.00 E-value=2.2 Score=41.59 Aligned_cols=74 Identities=22% Similarity=0.184 Sum_probs=50.7
Q ss_pred eeeeCCcccceeEEEEe--CCc----cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 56 ICPVGGGCINLASRYGT--DAG----SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~--~~~----~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
...+|.|....||+=+. .++ ...+|..... ....+..|+++++.|.+ ..|-+.|.+... ....+
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H---~NVVr~yGVa~~-~~Pl~ 237 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH---PNVVRFYGVAVL-EEPLM 237 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCccE
Confidence 36789999999998544 322 2455655421 13446689998888654 467788876543 45679
Q ss_pred EEEeeecCCC
Q 020294 124 IIMEFIEFGS 133 (328)
Q Consensus 124 ~v~e~l~G~~ 133 (328)
+|||.+.|+.
T Consensus 238 ivmEl~~gGs 247 (474)
T KOG0194|consen 238 LVMELCNGGS 247 (474)
T ss_pred EEEEecCCCc
Confidence 9999999984
No 469
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=89.00 E-value=0.22 Score=52.88 Aligned_cols=50 Identities=14% Similarity=0.119 Sum_probs=34.6
Q ss_pred eeeeeeeCCcccceeEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHh
Q 020294 53 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYE 102 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~ 102 (328)
...++.+|.|....||+|+.. || .|.+|.-+-. + ...+.+|+..|..|.+
T Consensus 481 FEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnH 536 (1351)
T KOG1035|consen 481 FEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNH 536 (1351)
T ss_pred hHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCC
Confidence 345677899999999999864 44 7888765421 1 2346678888877754
No 470
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=88.45 E-value=0.72 Score=49.52 Aligned_cols=29 Identities=31% Similarity=0.228 Sum_probs=25.2
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPAC 253 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~~ 253 (328)
.-+++|+|+++.||+.+.+|.....||++
T Consensus 1352 ~~gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1352 EHGIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred hcCceecCCCccceeeecCCcEEeecccc
Confidence 34899999999999999999778899853
No 471
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=88.09 E-value=6.2 Score=42.00 Aligned_cols=79 Identities=23% Similarity=0.237 Sum_probs=49.8
Q ss_pred ceeeeeeeCCcccceeEEEEeC--Ccc-----EEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCC
Q 020294 52 HITKICPVGGGCINLASRYGTD--AGS-----FFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 120 (328)
Q Consensus 52 ~i~~v~~i~~G~~n~~y~v~~~--~~~-----~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~ 120 (328)
.+.-...+|.|....||+-+.. +++ +-+|.-... ....|-.|+.+++.+.+. .|-+++...-. .+
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~Hp---Niv~liGv~l~-~~ 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHP---NIVSLIGVCLD-SG 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCc---ceeeEEEeecC-CC
Confidence 4455677899999999997653 332 333332221 124455666666555432 35556666544 67
Q ss_pred ceEEEEeeecCCCC
Q 020294 121 GSYIIMEFIEFGSS 134 (328)
Q Consensus 121 ~~~~v~e~l~G~~~ 134 (328)
.+++++||++|+++
T Consensus 769 ~~~i~leyM~gGDL 782 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDL 782 (1025)
T ss_pred CcEEEehhcccCcH
Confidence 88999999999864
No 472
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=87.77 E-value=0.54 Score=44.38 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=25.4
Q ss_pred CCceeccCCCCCCeeec--CCCCe--EEEccccccCCc
Q 020294 225 EPCLLHGDLWSGNISSD--KNGEP--VILDPACYYGHN 258 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~--~~~~~--~iID~~~~~G~p 258 (328)
.-.+-|+|++++|||+. +|+.+ +|-||.||..|-
T Consensus 359 ~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~ 396 (598)
T KOG4158|consen 359 KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD 396 (598)
T ss_pred HccchhhcccccceEEEecCCCCcEEEEcccceeeecc
Confidence 44799999999999995 45544 677888776543
No 473
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=87.75 E-value=0.32 Score=43.46 Aligned_cols=27 Identities=26% Similarity=0.372 Sum_probs=24.2
Q ss_pred CceeccCCCCCCeeecCCCCeEEEccc
Q 020294 226 PCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 226 ~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
.-+||+|.+|.|||++..|.+.+.||.
T Consensus 187 lkiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 187 LKIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred hhhhhccCChhheEEecCCCEeeeccc
Confidence 468999999999999998888899976
No 474
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=87.49 E-value=0.32 Score=44.89 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=25.3
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
...++|+||+|.|++++.+....|.||.
T Consensus 143 SAnViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 143 SANVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred cccccccccchhheeeccCCCEEecccc
Confidence 4579999999999999998888999985
No 475
>PLN00181 protein SPA1-RELATED; Provisional
Probab=87.34 E-value=0.78 Score=47.89 Aligned_cols=28 Identities=4% Similarity=0.050 Sum_probs=23.2
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
...++|+|++|.|||+++.+...++|+.
T Consensus 98 ~~gIvHrDlKP~NiLl~~~~~~k~~d~~ 125 (793)
T PLN00181 98 SQGIVVHNVRPSCFVMSSFNHVSFIESA 125 (793)
T ss_pred hCCeeeccCCchhEEEcccCcEEEeecc
Confidence 3579999999999999876667788763
No 476
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=86.69 E-value=3 Score=44.46 Aligned_cols=44 Identities=14% Similarity=0.125 Sum_probs=32.6
Q ss_pred HHHHHHHhcCCCcceeeeeeeCCcccceeEEEEeCCccEEEEecCC
Q 020294 39 PIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS 84 (328)
Q Consensus 39 ~i~~~l~~~~~~~~i~~v~~i~~G~~n~~y~v~~~~~~~vlK~~~~ 84 (328)
+++.++... .. ++.-++.+|.+-.=.+.|..+++|-+|+|.+-.
T Consensus 13 ~~e~yfsd~-~~-e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk 56 (1431)
T KOG1240|consen 13 PVEVYFSDL-SV-ECHYVENLGSTRFLKVARAKDREGLVVVKVFVK 56 (1431)
T ss_pred hHHHHhhcC-cc-ceeeecccCchhhhhhhhccCCCceEEEEEEec
Confidence 456677655 22 677777788777778888888999899998853
No 477
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=85.93 E-value=0.6 Score=47.07 Aligned_cols=137 Identities=22% Similarity=0.206 Sum_probs=80.4
Q ss_pred eeeeeeeCCcccceeEEEE--eCCc---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceE
Q 020294 53 ITKICPVGGGCINLASRYG--TDAG---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 123 (328)
Q Consensus 53 i~~v~~i~~G~~n~~y~v~--~~~~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~ 123 (328)
|.-.+.+|.|....|.|-+ ..+| .+.||.-+.+ ..+.|.+|+..+-.|.+. .+-++|...-+ ...-
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~---hliRLyGvVl~--qp~m 186 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHP---HLIRLYGVVLD--QPAM 186 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCc---ceeEEeeeecc--chhh
Confidence 3345667889988888854 3344 5677876643 245677888887777542 35555554321 2233
Q ss_pred EEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChH
Q 020294 124 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 203 (328)
Q Consensus 124 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~ 203 (328)
+|+|-.+ +|..|.+||+..... | .. .++-
T Consensus 187 MV~ELap----------lGSLldrLrka~~~~--l------------------------lv-~~Lc-------------- 215 (1039)
T KOG0199|consen 187 MVFELAP----------LGSLLDRLRKAKKAI--L------------------------LV-SRLC-------------- 215 (1039)
T ss_pred HHhhhcc----------cchHHHHHhhccccc--e------------------------eH-HHHH--------------
Confidence 4445444 456699999944310 1 00 0111
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 204 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 204 ~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
+...++...+. +|+ ...|||+||-..|+++-....+.|-||.
T Consensus 216 --dya~QiA~aM~-YLe----skrlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 216 --DYAMQIAKAMQ-YLE----SKRLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred --HHHHHHHHHHH-HHh----hhhhhhhhhhhhhheecccceeeeeccc
Confidence 11112222222 343 3589999999999999876667899985
No 478
>PHA00451 protein kinase
Probab=85.15 E-value=0.68 Score=41.19 Aligned_cols=29 Identities=41% Similarity=0.630 Sum_probs=22.9
Q ss_pred cCCCCCCeeecCCCCeEEEccccccCCch
Q 020294 231 GDLWSGNISSDKNGEPVILDPACYYGHNE 259 (328)
Q Consensus 231 gDl~~~Nil~~~~~~~~iID~~~~~G~p~ 259 (328)
=|.|+|||++++++.+.|-|+-++..|.+
T Consensus 193 FDmHSGNiMf~~~g~p~ITDPVSFS~dr~ 221 (362)
T PHA00451 193 FDMHSGNIMFDQDGVPYITDPVSFSHDRE 221 (362)
T ss_pred ccccCCceeeCCCCCeEecCCccccCccc
Confidence 39999999999999999999755443333
No 479
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=84.39 E-value=1.3 Score=40.24 Aligned_cols=76 Identities=18% Similarity=0.059 Sum_probs=45.6
Q ss_pred eeeeeCCcccceeEEEEe--CCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCcccceeccccC-CC--ceEEEEeee
Q 020294 55 KICPVGGGCINLASRYGT--DAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TG--GSYIIMEFI 129 (328)
Q Consensus 55 ~v~~i~~G~~n~~y~v~~--~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~-~~--~~~~v~e~l 129 (328)
+-+.+|-|....|-.+.. .+.+|.||+-... ...++|++ |.|+++. .-.+-.++.+.... .+ --.+|||.+
T Consensus 66 s~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--~KARrEVe-LHw~~s~-h~~iV~IidVyeNs~~~rkcLLiVmE~m 141 (400)
T KOG0604|consen 66 SWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--PKARREVE-LHWMASG-HPHIVSIIDVYENSYQGRKCLLIVMECM 141 (400)
T ss_pred hhhhhccccCCceEEEEeccchhhhHHHHHhcC--HHHHhHhh-hhhhhcC-CCceEEeehhhhhhccCceeeEeeeecc
Confidence 347778888777766543 2348888887542 33457777 5677653 23344444432211 22 346899999
Q ss_pred cCCCC
Q 020294 130 EFGSS 134 (328)
Q Consensus 130 ~G~~~ 134 (328)
+|+.+
T Consensus 142 eGGeL 146 (400)
T KOG0604|consen 142 EGGEL 146 (400)
T ss_pred cchHH
Confidence 99754
No 480
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=83.36 E-value=8.1 Score=37.60 Aligned_cols=49 Identities=16% Similarity=-0.000 Sum_probs=33.0
Q ss_pred eeeeCCcccceeEEEE-eCCccEE-EEecCCC--CcchHHHHHHHHHHHHhcC
Q 020294 56 ICPVGGGCINLASRYG-TDAGSFF-VKTNRSI--GPSMFEGEALGLGAMYETR 104 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~-~~~~~~v-lK~~~~~--~~~~~~~E~~~l~~L~~~~ 104 (328)
++.+|=|..++||..- +.+.+|| +|+-... ..+.-..|+.+|+.+++..
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~D 135 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGD 135 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcC
Confidence 6678888899999964 4444554 4766532 1233447999999998753
No 481
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=83.25 E-value=2.4 Score=39.93 Aligned_cols=29 Identities=24% Similarity=0.201 Sum_probs=24.7
Q ss_pred CCCceeccCCCCCCeeecCCCCeEEEcccc
Q 020294 224 VEPCLLHGDLWSGNISSDKNGEPVILDPAC 253 (328)
Q Consensus 224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~~ 253 (328)
....+-|.|++-+|||++ +|.+.+||+-+
T Consensus 339 kkf~fehrnlt~~niLId-~GnvtLIDfkl 367 (488)
T COG5072 339 KKFPFEHRNLTLDNILID-EGNVTLIDFKL 367 (488)
T ss_pred hcCCcccccccccceeee-cCceEEEEeee
Confidence 466789999999999998 66689999854
No 482
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=81.89 E-value=0.79 Score=40.54 Aligned_cols=71 Identities=17% Similarity=0.184 Sum_probs=42.7
Q ss_pred eCCcccceeEEEEe-CCc-cEEEEecC-----CCCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecC
Q 020294 59 VGGGCINLASRYGT-DAG-SFFVKTNR-----SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 131 (328)
Q Consensus 59 i~~G~~n~~y~v~~-~~~-~~vlK~~~-----~~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G 131 (328)
++.|..+-|+|+-. +.| .|.+|+-. ..+-+.+++|+.+-+.|.+- .+-++...-+. ++..|+|+|.++|
T Consensus 19 igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP---~IvrL~~ti~~-~~~~ylvFe~m~G 94 (355)
T KOG0033|consen 19 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP---NIVRLHDSIQE-ESFHYLVFDLVTG 94 (355)
T ss_pred HccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCC---cEeehhhhhcc-cceeEEEEecccc
Confidence 45566666666432 223 56666532 22346688999998888541 22233322221 6889999999999
Q ss_pred CC
Q 020294 132 GS 133 (328)
Q Consensus 132 ~~ 133 (328)
..
T Consensus 95 ~d 96 (355)
T KOG0033|consen 95 GE 96 (355)
T ss_pred hH
Confidence 74
No 483
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=81.31 E-value=0.93 Score=41.22 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=27.1
Q ss_pred cceeeeeeeCCcccceeEEEEeCC--ccEEEEecC
Q 020294 51 THITKICPVGGGCINLASRYGTDA--GSFFVKTNR 83 (328)
Q Consensus 51 ~~i~~v~~i~~G~~n~~y~v~~~~--~~~vlK~~~ 83 (328)
..+..-+.|+.|..+.+|+++..+ ..|.||+..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~ 46 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFL 46 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEe
Confidence 356677888999999999999865 489999875
No 484
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.11 E-value=5.8 Score=36.74 Aligned_cols=43 Identities=23% Similarity=0.365 Sum_probs=32.4
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC 267 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~-~~~G~p~~DLa~~~~ 267 (328)
..++|-+||+.+|||+|.+|...+-|.. |--|-.--|++.+.|
T Consensus 369 ~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfc 412 (593)
T KOG0695|consen 369 ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFC 412 (593)
T ss_pred hcCeeeeeccccceEEccCCceeecccchhhcCCCCCccccccc
Confidence 4589999999999999999877888853 334555556665555
No 485
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=80.74 E-value=15 Score=31.17 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCC
Q 020294 92 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 134 (328)
Q Consensus 92 ~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~ 134 (328)
.|.-+++.|.+. . ++|++++... .+++.|++...++
T Consensus 8 ~E~lll~~l~~~-~-~~pk~lG~CG-----~~~v~E~~~~~~~ 43 (188)
T PF12260_consen 8 NEPLLLQLLQGS-E-PFPKLLGSCG-----RFYVVEYVGAGSL 43 (188)
T ss_pred cHHHHHHHcCCC-C-CCCCeeeECC-----CEEEEEeecCccc
Confidence 478888999875 3 9999999873 4889999886543
No 486
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=79.62 E-value=7.5 Score=37.55 Aligned_cols=160 Identities=20% Similarity=0.234 Sum_probs=88.8
Q ss_pred hhhhcCChhHHHHHHHhc----CCCcce-----------eeeeeeCCcccceeEEEEeC-Ccc-EEEEecC------CCC
Q 020294 30 FAMAALSDDPIREWILSE----GKATHI-----------TKICPVGGGCINLASRYGTD-AGS-FFVKTNR------SIG 86 (328)
Q Consensus 30 ~~~~~~~~~~i~~~l~~~----~~~~~i-----------~~v~~i~~G~~n~~y~v~~~-~~~-~vlK~~~------~~~ 86 (328)
++.+.+..+..++++.+. .+.++- ....-+|-|....||-.+.. .|+ |..|.-. ..+
T Consensus 149 ~~~~~L~~~pF~~f~~S~yf~rFlQWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~g 228 (591)
T KOG0986|consen 149 AICAYLRGDPFQEFLESDYFTRFLQWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKG 228 (591)
T ss_pred HHHHHhccchHhHhHHHHHHHHHHHHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhh
Confidence 445556666666666543 122222 22333455555666655542 232 2222111 112
Q ss_pred cchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q 020294 87 PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTI 166 (328)
Q Consensus 87 ~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~g~~~~~~~ 166 (328)
..+...|..+|+.+.. ++.|.-.|++.. .+.-++||.-..|+++ ++|-..... .||+
T Consensus 229 e~maLnEk~iL~kV~s--~FiVslaYAfeT--kd~LClVLtlMNGGDL------------kfHiyn~g~--~gF~----- 285 (591)
T KOG0986|consen 229 ETMALNEKQILEKVSS--PFIVSLAYAFET--KDALCLVLTLMNGGDL------------KFHIYNHGN--PGFD----- 285 (591)
T ss_pred hHHhhHHHHHHHHhcc--CcEEEEeeeecC--CCceEEEEEeecCCce------------eEEeeccCC--CCCc-----
Confidence 3344467778887765 577777777754 3577999999999986 666655422 1221
Q ss_pred cccccCCCCcccHHHHHHHhhhHHHHHHHHhhCCChHHHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCe
Q 020294 167 GSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEP 246 (328)
Q Consensus 167 g~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~ 246 (328)
..-.-||++ +++=.+.++ ....++-+||+|.|||.|+.|..
T Consensus 286 ----------e~ra~FYAA------------------------Ei~cGLehl-----H~~~iVYRDLKPeNILLDd~Ghv 326 (591)
T KOG0986|consen 286 ----------EQRARFYAA------------------------EIICGLEHL-----HRRRIVYRDLKPENILLDDHGHV 326 (591)
T ss_pred ----------hHHHHHHHH------------------------HHHhhHHHH-----HhcceeeccCChhheeeccCCCe
Confidence 111223321 111112222 23478899999999999999877
Q ss_pred EEEcc
Q 020294 247 VILDP 251 (328)
Q Consensus 247 ~iID~ 251 (328)
-|-|-
T Consensus 327 RISDL 331 (591)
T KOG0986|consen 327 RISDL 331 (591)
T ss_pred Eeecc
Confidence 78773
No 487
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=78.99 E-value=1.6 Score=39.64 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=40.1
Q ss_pred eeeeCCcccceeEEEEe-CCcc-EEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEeeecCC
Q 020294 56 ICPVGGGCINLASRYGT-DAGS-FFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 132 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~-~~~~-~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~l~G~ 132 (328)
++.+|.|....||+.-. ..|. +.+|.-+-+ ....+-+|+.+++.- .+-.|-+-|... ++...-|+||||+..+
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC---~S~yVVKYYGSY-FK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQC---KSKYVVKYYGSY-FKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHc---CCchhhhhhhhh-ccCCceEeehhhcCCC
Confidence 44567788888887433 3453 334544432 233455676665533 222343333221 1235679999998765
Q ss_pred C
Q 020294 133 S 133 (328)
Q Consensus 133 ~ 133 (328)
.
T Consensus 114 S 114 (502)
T KOG0574|consen 114 S 114 (502)
T ss_pred c
Confidence 4
No 488
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=77.78 E-value=3.3 Score=39.95 Aligned_cols=57 Identities=21% Similarity=0.154 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecCCCCeEEEccc-c---ccCCchhhhhhh
Q 020294 204 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C---YYGHNEAEFGMS 265 (328)
Q Consensus 204 ~~~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~~~~~~iID~~-~---~~G~p~~DLa~~ 265 (328)
++..+-++++.+..+- .-++-|+|++|+|||+.....+.|=||+ | ..-+|..|-.-+
T Consensus 112 irnim~QilqGL~hiH-----k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVST 172 (538)
T KOG0661|consen 112 IRNIMYQILQGLAHIH-----KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVST 172 (538)
T ss_pred HHHHHHHHHHHHHHHH-----hcCcccccCChhheEecccceeEecccccccccccCCCcchhhhc
Confidence 3445555665555432 4589999999999999866667888974 2 356777776544
No 489
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=77.74 E-value=1.4 Score=40.45 Aligned_cols=28 Identities=29% Similarity=0.343 Sum_probs=24.2
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
..+++|+||+|.||++..++...|.|+.
T Consensus 136 s~~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 136 SAGIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred hcceeecccCcccceecchhheeeccch
Confidence 4589999999999999887777888874
No 490
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=74.86 E-value=1.4 Score=39.12 Aligned_cols=28 Identities=25% Similarity=0.304 Sum_probs=24.4
Q ss_pred CCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 225 EPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
+.-++|+|.++.|||++.++...|-||.
T Consensus 142 r~kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 142 RNKILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred HhhHHhhcccHhhEEEcCCceEEeeccc
Confidence 4469999999999999999988888863
No 491
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=74.45 E-value=1.6 Score=41.77 Aligned_cols=24 Identities=25% Similarity=0.320 Sum_probs=18.4
Q ss_pred ceeccCCCCCCeeecCCCC----eEEEc
Q 020294 227 CLLHGDLWSGNISSDKNGE----PVILD 250 (328)
Q Consensus 227 ~LiHgDl~~~Nil~~~~~~----~~iID 250 (328)
-++|+|+|||||++..+.. .+++|
T Consensus 365 NFvHaDlHPGNVlirf~~t~~~~~~~~~ 392 (565)
T KOG1236|consen 365 NFVHADLHPGNVLIRFNKTEDNLRGVHK 392 (565)
T ss_pred cceecccCCCcEEEEecCCCcccccccc
Confidence 5999999999999975431 35666
No 492
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.35 E-value=20 Score=32.96 Aligned_cols=61 Identities=20% Similarity=0.147 Sum_probs=41.1
Q ss_pred CCCCceeccCCCCCCeeecCC--CCe--EEEcc-ccccCCchhhhhhhh--h------cCCC--------hhhHHHHhhh
Q 020294 223 NVEPCLLHGDLWSGNISSDKN--GEP--VILDP-ACYYGHNEAEFGMSW--C------AGFG--------GSFYNSYFEV 281 (328)
Q Consensus 223 ~~~~~LiHgDl~~~Nil~~~~--~~~--~iID~-~~~~G~p~~DLa~~~--~------~~~~--------~~f~~~Y~~~ 281 (328)
.-+.+++-||+|.+|.=--.+ |.+ -|=|| +...|.+.+||..+. . .++. +.|+++|...
T Consensus 55 ~~p~tw~cGD~HLgN~ga~~~~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a~Rs~~L~d~d~~~~~~~~v~~Y~~A 134 (410)
T COG4320 55 KTPFTWLCGDAHLGNFGAARNSKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLAGRSNGLNDADIEKAIKIMVQAYKMA 134 (410)
T ss_pred CCCceEEecccccccchhhccCCCceEEEecccchhhccchHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHh
Confidence 357799999999999865433 322 24457 578999999998652 1 2332 3589999544
Q ss_pred CC
Q 020294 282 MP 283 (328)
Q Consensus 282 ~p 283 (328)
.+
T Consensus 135 a~ 136 (410)
T COG4320 135 AF 136 (410)
T ss_pred hc
Confidence 43
No 493
>PF07805 HipA_N: HipA-like N-terminal domain; InterPro: IPR012894 The members of this entry contain a region that is found towards the N terminus of the HipA protein expressed by various bacterial species (for example P23874 from SWISSPROT). This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis []. When expressed alone, it is toxic to bacterial cells [], but it is usually tightly associated with HipB [], and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products []. ; PDB: 2WIU_C 3HZI_A 3DNT_B 3FBR_A 3DNU_A 3DNV_A.
Probab=72.23 E-value=16 Score=26.04 Aligned_cols=50 Identities=18% Similarity=0.143 Sum_probs=29.1
Q ss_pred cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEee
Q 020294 76 SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 128 (328)
Q Consensus 76 ~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e~ 128 (328)
.+++|..... .......|+..++..+. .|++||..-.... .+..+++.++
T Consensus 28 ~~IvK~~~~~~~~~~~~nE~~~~~lA~~-~Gi~v~~~~l~~~--~~~~~l~v~R 78 (81)
T PF07805_consen 28 THIVKFPSSRDDPDLVENEYACMRLARA-AGIPVPETRLIRF--GDRPALAVER 78 (81)
T ss_dssp SEEEE-S-CEEETTHHHHHHHHHHHHHH-TT-----EEEEEE--TTEEEEEEE-
T ss_pred eEEEeCCCcccccchHHHHHHHHHHHHH-cCCCcCceEEEEE--CCeEEEEEeC
Confidence 8999998765 55667788888886665 5899998776443 2456666654
No 494
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=68.49 E-value=3.5 Score=41.64 Aligned_cols=29 Identities=31% Similarity=0.237 Sum_probs=26.1
Q ss_pred CCCceeccCCCCCCeeecCCCCeEEEccc
Q 020294 224 VEPCLLHGDLWSGNISSDKNGEPVILDPA 252 (328)
Q Consensus 224 ~~~~LiHgDl~~~Nil~~~~~~~~iID~~ 252 (328)
...++.|.|++++|+++..++...|+|+.
T Consensus 437 h~~GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 437 HSMGLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred HhcCceeccCccccEEEecCCceEEeecC
Confidence 35689999999999999999988999985
No 495
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=67.04 E-value=4.6 Score=34.65 Aligned_cols=27 Identities=33% Similarity=0.310 Sum_probs=21.4
Q ss_pred eeccCCCCCCeeecCCCCeEEEccccc
Q 020294 228 LLHGDLWSGNISSDKNGEPVILDPACY 254 (328)
Q Consensus 228 LiHgDl~~~Nil~~~~~~~~iID~~~~ 254 (328)
+-=||-|++||+++++|...-||+...
T Consensus 103 lglgDRh~~NIli~~~G~v~hIDfg~~ 129 (202)
T smart00146 103 LGLGDRHNDNIMLDKTGHLFHIDFGFI 129 (202)
T ss_pred hcCCCCCCCcEEEeCCCCEEEEechhh
Confidence 334699999999998887888997543
No 496
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=65.17 E-value=4.6 Score=35.58 Aligned_cols=32 Identities=28% Similarity=0.223 Sum_probs=24.7
Q ss_pred CCceeccCCCCCCeeec-CCCCeEEEccccccC
Q 020294 225 EPCLLHGDLWSGNISSD-KNGEPVILDPACYYG 256 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~-~~~~~~iID~~~~~G 256 (328)
.+.|-=||=|++||+++ .+|...-||+...+|
T Consensus 135 ~YilglgDRH~~NIli~~~tG~v~HIDfg~~f~ 167 (235)
T cd05172 135 HWILGIGDRHLSNFLVDLETGGLVGIDFGHAFG 167 (235)
T ss_pred hheeeccCCCcccEEEECCCCcEEEEeeHhhhc
Confidence 44566689999999998 467788899865443
No 497
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=64.55 E-value=3.8 Score=31.95 Aligned_cols=48 Identities=19% Similarity=0.116 Sum_probs=37.9
Q ss_pred eeeeCCcccceeEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhc
Q 020294 56 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYET 103 (328)
Q Consensus 56 v~~i~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~ 103 (328)
-+|++.|....||+.++.+| .++||+-++.-...+......++.+...
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~ 64 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARL 64 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 46778889999999998765 8999998876566677778888777653
No 498
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=63.36 E-value=27 Score=35.39 Aligned_cols=70 Identities=20% Similarity=0.169 Sum_probs=43.6
Q ss_pred eeCCcccceeEEEEe--C-Cc---cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCcccceeccccCCCceEEEEe
Q 020294 58 PVGGGCINLASRYGT--D-AG---SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 127 (328)
Q Consensus 58 ~i~~G~~n~~y~v~~--~-~~---~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~v~VP~~~~~~~~~~~~~~~v~e 127 (328)
.||+|+...||.-.- . .| .+.+|.+.. +..+.|-.|+-+++.+.+ -.+-+++.... +...|+|||
T Consensus 396 ~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdH---phIikLIGv~~--e~P~WivmE 470 (974)
T KOG4257|consen 396 LIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDH---PHIIKLIGVCV--EQPMWIVME 470 (974)
T ss_pred hhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCC---cchhheeeeee--ccceeEEEe
Confidence 469999999999442 2 23 466777754 234567778876665532 23445555544 457799999
Q ss_pred eecCC
Q 020294 128 FIEFG 132 (328)
Q Consensus 128 ~l~G~ 132 (328)
-.+-+
T Consensus 471 L~~~G 475 (974)
T KOG4257|consen 471 LAPLG 475 (974)
T ss_pred cccch
Confidence 65543
No 499
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=62.17 E-value=9.1 Score=39.56 Aligned_cols=42 Identities=26% Similarity=0.236 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhhhccCCCCCCceeccCCCCCCeeecC---CCC--eEEEccc
Q 020294 206 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK---NGE--PVILDPA 252 (328)
Q Consensus 206 ~~~~~~~~~l~~~l~~~~~~~~LiHgDl~~~Nil~~~---~~~--~~iID~~ 252 (328)
..+.+..+.+.++- ...++|+||+|.|||+.. ++. ..|-|+.
T Consensus 610 ~~l~q~~~GlaHLH-----sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 610 SVLSQIASGLAHLH-----SLKIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred HHHHHHHHHHHHHH-----hcccccccCCCceEEEEccCCCcceeEEecccc
Confidence 34444455555432 367999999999999987 332 3466764
No 500
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=61.80 E-value=5.6 Score=36.59 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=25.1
Q ss_pred CCceeccCCCCCCeeec-CCCCeEEEccccccC
Q 020294 225 EPCLLHGDLWSGNISSD-KNGEPVILDPACYYG 256 (328)
Q Consensus 225 ~~~LiHgDl~~~Nil~~-~~~~~~iID~~~~~G 256 (328)
...|-=||-|++|||++ ..|...-||+..+++
T Consensus 208 ~yilglgDRh~~NIli~~~tG~v~hiDf~~~f~ 240 (307)
T cd05170 208 GYVIGLGDRHLDNVLIDLKTGEVVHIDYNVCFE 240 (307)
T ss_pred HHHccCCCCCCccEEEEcCCCcEEEEeeHhhhc
Confidence 45666789999999999 467788899875543
Done!