BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020296
(328 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2EIX|A Chain A, The Structure Of Physarum Polycephalum Cytochrome B5
Reductase
pdb|2EIX|B Chain B, The Structure Of Physarum Polycephalum Cytochrome B5
Reductase
Length = 243
Score = 197 bits (500), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 151/258 (58%), Gaps = 20/258 (7%)
Query: 72 ALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKY 130
ALNP+++ F L++ ++HN+ LFRF+ P +GL + + +A + + K
Sbjct: 5 ALNPNEYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATV------DGKE 58
Query: 131 VVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKH 190
+ RPYTP+S + KG+FDL+IKVY +G+MSQ+ L PGD ++V+GP + Y PNM K
Sbjct: 59 IYRPYTPVSSDDEKGYFDLIIKVYEKGQMSQYIDHLNPGDFLQVRGPKGQFDYKPNMVKE 118
Query: 191 IGMIAGGTGITPMLQVIEAILKNPDDNTQVSLLYGNISPXXXXXXXXXXXXAASHPNLKV 250
+GMIAGGTGITPMLQV AI+KNP + T ++L++ N++ A + N KV
Sbjct: 119 MGMIAGGTGITPMLQVARAIIKNPKEKTIINLIFANVNEDDILLRTELDDMAKKYSNFKV 178
Query: 251 FYTVDNPTKNWKGGVGYISKDTALKGLPSPSDDALILVCGPPGMMKHVSGEKAKDYSQGE 310
+Y ++NP W GGVG++S D + PS D +++CGPP M K + G
Sbjct: 179 YYVLNNPPAGWTGGVGFVSADMIKQHFSPPSSDIKVMMCGPPMMNKAMQGH--------- 229
Query: 311 LSGILKDLGYTEQMVYKF 328
L+ LGYT + + F
Sbjct: 230 ----LETLGYTPEQWFIF 243
>pdb|1NDH|A Chain A, Crystal Structure Of Nadh-Cytochrome B5 Reductase From Pig
Liver At 2.4 Angstroms Resolution
Length = 272
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 138/259 (53%), Gaps = 34/259 (13%)
Query: 67 TDPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDA 124
+ P I L NPD +L D V+H++ FRF+ P LGL V I L
Sbjct: 1 STPAITLENPDIKYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIY----LSARI 56
Query: 125 EGNTKYVVRPYTPISDTEAKGHFDLLIKVY-----PE----GKMSQHFASLKPGDVVEVK 175
+GN V+RPYTP+S + KG DL+IKVY P+ GKMSQ+ S+K GD +E +
Sbjct: 57 DGN--LVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFR 114
Query: 176 GPIEKLRY--------------SPNMK--KHIGMIAGGTGITPMLQVIEAILKNPDDNTQ 219
GP L Y SP +K K +GMIAGGTGITPMLQVI AI+K+PDD+T
Sbjct: 115 GPNGLLVYQGKGKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTV 174
Query: 220 VSLLYGNISPXXXXXXXXXXXXAASH-PNLKVFYTVDNPTKNWKGGVGYISKDTALKGLP 278
LL+ N + H K++YTVD + W G+++++ LP
Sbjct: 175 CHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDRAPEAWDYSQGFVNEEMIRDHLP 234
Query: 279 SPSDDALILVCGPPGMMKH 297
P ++ L+L+CGPP M+++
Sbjct: 235 PPEEEPLVLMCGPPPMIQY 253
>pdb|1UMK|A Chain A, The Structure Of Human Erythrocyte Nadh-Cytochrome B5
Reductase
Length = 275
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 140/261 (53%), Gaps = 34/261 (13%)
Query: 65 EETDPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQ 122
+ + P I L +PD +L D +SH++ FRF+ P LGL V I A +
Sbjct: 2 QRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARI-- 59
Query: 123 DAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY-----PE----GKMSQHFASLKPGDVVE 173
+GN VVRPYTPIS + KG DL+IKVY P+ GKMSQ+ S++ GD +E
Sbjct: 60 --DGN--LVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIE 115
Query: 174 VKGPIEKLRYS--------PNMK--------KHIGMIAGGTGITPMLQVIEAILKNPDDN 217
+GP L Y P+ K K +GMIAGGTGITPMLQVI AI+K+PDD+
Sbjct: 116 FRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDH 175
Query: 218 TQVSLLYGNISPXXXXXXXXXXXXAASH-PNLKVFYTVDNPTKNWKGGVGYISKDTALKG 276
T LL+ N + H K++YT+D + W G G+++++
Sbjct: 176 TVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDH 235
Query: 277 LPSPSDDALILVCGPPGMMKH 297
LP P ++ L+L+CGPP M+++
Sbjct: 236 LPPPEEEPLVLMCGPPPMIQY 256
>pdb|1IB0|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad And Nad
pdb|1I7P|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad
Length = 274
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 128/250 (51%), Gaps = 33/250 (13%)
Query: 74 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVV 132
NPD +L D +SH++ FRF+ P LGL + I L +GN V+
Sbjct: 11 NPDIKYPLRLIDKEILSHDTRRFRFALPSPQHILGLPIGQHIY----LSTRIDGN--LVI 64
Query: 133 RPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY 183
RPYTP+S + KG DL++KVY + GKMSQ+ ++ GD +E +GP L Y
Sbjct: 65 RPYTPVSSDDDKGFVDLVVKVYFKETHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVY 124
Query: 184 SPNMK----------------KHIGMIAGGTGITPMLQVIEAILKNPDDNTQVSLLYGNI 227
K K +GMIAGGTGITPMLQVI A+LK+P+D+T LL+ N
Sbjct: 125 QGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQ 184
Query: 228 SPXXXXXXXXXXXXAASHPN-LKVFYTVDNPTKNWKGGVGYISKDTALKGLPSPSDDALI 286
S H + K++YTVD W G+++++ LP P ++ LI
Sbjct: 185 SEKDILLRPELEELRNEHSSRFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPPPGEETLI 244
Query: 287 LVCGPPGMMK 296
L+CGPP M++
Sbjct: 245 LMCGPPPMIQ 254
>pdb|1QX4|A Chain A, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
pdb|1QX4|B Chain B, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
Length = 274
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 128/250 (51%), Gaps = 33/250 (13%)
Query: 74 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVV 132
NPD +L D +SH++ FRF+ P LGL + I L +GN V+
Sbjct: 11 NPDIKYPLRLIDKEILSHDTRRFRFALPSPQHILGLPIGQHIY----LSTRIDGN--LVI 64
Query: 133 RPYTPISDTEAKGHFDLLIKVY-----PE----GKMSQHFASLKPGDVVEVKGPIEKLRY 183
RPYTP+S + KG DL++KVY P+ GKM Q+ ++ GD +E +GP L Y
Sbjct: 65 RPYTPVSSDDDKGFVDLVVKVYFKETHPKFPAGGKMPQYLENMNIGDTIEFRGPNGLLVY 124
Query: 184 SPNMK----------------KHIGMIAGGTGITPMLQVIEAILKNPDDNTQVSLLYGNI 227
K K +GMIAGGTGITPMLQVI A+LK+P+D+T LL+ N
Sbjct: 125 QGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQ 184
Query: 228 SPXXXXXXXXXXXXAASHPN-LKVFYTVDNPTKNWKGGVGYISKDTALKGLPSPSDDALI 286
S H + K++YTVD W G+++++ LP P ++ LI
Sbjct: 185 SEKDILLRPELEELRNEHSSRFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPPPGEETLI 244
Query: 287 LVCGPPGMMK 296
L+CGPP M++
Sbjct: 245 LMCGPPPMIQ 254
>pdb|1CNF|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
pdb|2CND|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
Length = 270
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 129/248 (52%), Gaps = 31/248 (12%)
Query: 74 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVV 132
NP I +L +S + LFRFS P LGL + I A + EG K +
Sbjct: 8 NPRGRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATI----EG--KLCM 61
Query: 133 RPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY 183
R YTP S + GHFDLL+KVY + G M+Q+ SL G ++VKGP+ + Y
Sbjct: 62 RAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEY 121
Query: 184 S----------PNMKKHIGMIAGGTGITPMLQVIEAILKN-PDDNTQVSLLYGNISPXXX 232
+ + + MI GG+GITPM Q+I+A+L++ P+D+T++ L+Y N +
Sbjct: 122 TGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDI 181
Query: 233 XXXXXXXXXAASHPN-LKVFYTVDN---PTKNWKGGVGYISKDTALKGLPSPSDDALILV 288
AA +P+ LKV+Y +D P + WK VG++++ + +P DD L L
Sbjct: 182 LLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALA 241
Query: 289 CGPPGMMK 296
CGPP M++
Sbjct: 242 CGPPPMIQ 249
>pdb|1CNE|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
Length = 270
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 128/248 (51%), Gaps = 31/248 (12%)
Query: 74 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVV 132
NP I +L +S + LFRFS P LGL + I A + EG K +
Sbjct: 8 NPRGRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATI----EG--KLCM 61
Query: 133 RPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY 183
R YTP S + GHFDLL+KVY + G M+Q+ SL G ++VKGP+ + Y
Sbjct: 62 RAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEY 121
Query: 184 S----------PNMKKHIGMIAGGTGITPMLQVIEAILKN-PDDNTQVSLLYGNISPXXX 232
+ + + MI GG+GITPM Q+I+A+L++ P+D+T++ L+Y N +
Sbjct: 122 TGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDI 181
Query: 233 XXXXXXXXXAASHPN-LKVFYTVDN---PTKNWKGGVGYISKDTALKGLPSPSDDALILV 288
AA +P+ LKV+Y +D P + WK VG++++ + +P DD L L
Sbjct: 182 LLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALA 241
Query: 289 CGPPGMMK 296
GPP M++
Sbjct: 242 SGPPPMIQ 249
>pdb|1TVC|A Chain A, Fad And Nadh Binding Domain Of Methane Monooxygenase
Reductase From Methylococcus Capsulatus (Bath)
Length = 250
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 131 VVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFAS-LKPGDVVEVKGPIEKLRYSPNMKK 189
V R Y+P + +G + LI+V PEG+ S + + + G V+ VKGP+
Sbjct: 59 VSRSYSPANLPNPEGRLEFLIRVLPEGRFSDYLRNDARVGQVLSVKGPLGVFGLKERGMA 118
Query: 190 HIGMIAGGTGITPMLQVIEAILKNPDDNTQVSLLYGNISPXXXXXXXXXXXXAASHPNLK 249
+AGGTG+ P++ ++ + + N + + +G + S NL
Sbjct: 119 PRYFVAGGTGLAPVVSMVRQMQEWTAPN-ETRIYFGVNTEPELFYIDELKSLERSMRNLT 177
Query: 250 VFYTVDNPTKNWKGGVGYISKDTALKGLPSPSDDALILVCGPPGMM 295
V V +P+ +W+G G D + L S + I +CGPPGM+
Sbjct: 178 VKACVWHPSGDWEGEQGS-PIDALREDLESSDANPDIYLCGPPGMI 222
>pdb|2R6H|A Chain A, Crystal Structure Of The Domain Comprising The Nad Binding
And The Fad Binding Regions Of The Nadh:ubiquinone
Oxidoreductase, Na Translocating, F Subunit From
Porphyromonas Gingivalis
pdb|2R6H|B Chain B, Crystal Structure Of The Domain Comprising The Nad Binding
And The Fad Binding Regions Of The Nadh:ubiquinone
Oxidoreductase, Na Translocating, F Subunit From
Porphyromonas Gingivalis
pdb|2R6H|C Chain C, Crystal Structure Of The Domain Comprising The Nad Binding
And The Fad Binding Regions Of The Nadh:ubiquinone
Oxidoreductase, Na Translocating, F Subunit From
Porphyromonas Gingivalis
pdb|2R6H|D Chain D, Crystal Structure Of The Domain Comprising The Nad Binding
And The Fad Binding Regions Of The Nadh:ubiquinone
Oxidoreductase, Na Translocating, F Subunit From
Porphyromonas Gingivalis
Length = 290
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 55/149 (36%), Gaps = 7/149 (4%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNPDD 216
G S + SLKPGD V GP + + I GG G P+ I + +
Sbjct: 126 GISSSYIFSLKPGDKVXXSGPYGDFHIQDTDAEXL-YIGGGAGXAPLRAQILHLFRTLKT 184
Query: 217 NTQVSLLYGNISPXXXXXXXXXXXXAASHPNLKVFYTVDNPT--KNWKGGVGYISK---D 271
+VS YG S PN K + +P NW G VG+I + D
Sbjct: 185 GRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYD 244
Query: 272 TALKGLPSPSDDALILVCGPPGMMKHVSG 300
LK +P +D CGP V G
Sbjct: 245 NYLKDHDAP-EDIEYYXCGPGPXANAVKG 272
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 87/215 (40%), Gaps = 29/215 (13%)
Query: 119 PLGQDAEGNTK------YVVRPYTPISDTEAKG----HFDLLIK---VYPE-------GK 158
P G+D E K Y VR Y+ S + + G + + +IK +Y E G
Sbjct: 74 PPGEDPEKKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGV 133
Query: 159 MSQHFASLKPGDVVEVKGPIEKLRYSPN--MKKHIGMIAGGTGITPMLQVIEAILKNP-- 214
S + LKPGD V + GP K PN I +A GTGI P + + E +L++
Sbjct: 134 CSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKLI 193
Query: 215 DDNTQVSLLYGNISPXXXXXXXXXXXXAASHPNLKVFYTVDNPTKN-WKGGVGYIS---K 270
++L+YG + H N K+ + KN + GG YIS +
Sbjct: 194 KFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLITAISREEKNSFDGGRMYISHRVR 253
Query: 271 DTALKGLPSPSDDALILVC-GPPGMMKHVSGEKAK 304
+ A + +C GP GM K V E K
Sbjct: 254 EQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQK 288
>pdb|1KRH|A Chain A, X-Ray Stucture Of Benzoate Dioxygenase Reductase
pdb|1KRH|B Chain B, X-Ray Stucture Of Benzoate Dioxygenase Reductase
Length = 338
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 149 LLIKVYPEGKMSQHFA-SLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVI 207
+++ P+GKMS++ + K GD + GP Y ++K+ + M+AGGTGI P L ++
Sbjct: 171 FVVRNVPQGKMSEYLSVQAKAGDKMSFTGPFGSF-YLRDVKRPVLMLAGGTGIAPFLSML 229
Query: 208 EAILKNPDDNTQVSLLYG 225
+ +L+ V L++G
Sbjct: 230 Q-VLEQKGSEHPVRLVFG 246
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+AGGTGITPM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTALKGLPSPSDDALIL---------VCGPPGM 294
YI A +D+ L +CGP GM
Sbjct: 236 YIQDRVA-----EHADELWQLIKNQKTHTYICGPRGM 267
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+AGGTGITPM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA-----LKGLPSPSDDALILVCGPPGM 294
YI A L L + +CGPP M
Sbjct: 236 YIQDRVAEHADQLWQLIK-NQKTHTYICGPPPM 267
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+AGGTGITPM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA-----LKGLPSPSDDALILVCGPPGM 294
YI A L L + +CGP GM
Sbjct: 236 YIQDRVAEHADQLWQLIK-NQKTHTYICGPRGM 267
>pdb|3OZU|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Miconazole
pdb|3OZV|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZV|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZW|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
pdb|3OZW|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
Length = 403
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 9/133 (6%)
Query: 169 GDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDNTQVSLLYGNIS 228
GD V++ P + K I +I+GG G+TPM+ +++ L+ P QV ++G +
Sbjct: 247 GDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQAPP--RQVVFVHGARN 304
Query: 229 PXXXXXXXXXXXXAASHPNLKVFYTVDNPTKNWKGGVGY-----ISKDTALKGLPSPSDD 283
A ++ NL +F D P G Y + K + P D
Sbjct: 305 SAVHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLP--D 362
Query: 284 ALILVCGPPGMMK 296
A +CGP M+
Sbjct: 363 ADYYICGPIPFMR 375
>pdb|1CQX|A Chain A, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
pdb|1CQX|B Chain B, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
Length = 403
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 9/133 (6%)
Query: 169 GDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDNTQVSLLYGNIS 228
GD V++ P + K I +I+GG G+TPM+ +++ L+ P QV ++G +
Sbjct: 247 GDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQAPP--RQVVFVHGARN 304
Query: 229 PXXXXXXXXXXXXAASHPNLKVFYTVDNPTKNWKGGVGY-----ISKDTALKGLPSPSDD 283
A ++ NL +F D P G Y + K + P D
Sbjct: 305 SAVHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLP--D 362
Query: 284 ALILVCGPPGMMK 296
A +CGP M+
Sbjct: 363 ADYYICGPIPFMR 375
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+AGGTGITPM + + K+ +
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAE 174
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 175 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 234
Query: 267 YISKDTA 273
YI A
Sbjct: 235 YIQDRVA 241
>pdb|1QFJ|A Chain A, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|B Chain B, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|C Chain C, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|D Chain D, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
Length = 232
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Query: 133 RPYTPISDTEAKGHFDL-----LIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNM 187
RP++ S + KG +L I +Y + M + LK +V V P + +
Sbjct: 46 RPFSMASTPDEKGFIELHIGASEINLYAKAVMDR---ILKDHQIV-VDIPHGEAWLRDDE 101
Query: 188 KKHIGMIAGGTGITPMLQVI-EAILKNPDDNTQVSLLYGNISPXXXXXXXXXXXXAASHP 246
++ + +IAGGTG + ++ A+ +NP N +++ +G + HP
Sbjct: 102 ERPMILIAGGTGFSYARSILLTALARNP--NRDITIYWGGREEQHLYDLCELEALSLKHP 159
Query: 247 NLKVFYTVDNPTKNWKGGVGYI 268
L+V V+ P W+G G +
Sbjct: 160 GLQVVPVVEQPEAGWRGRTGTV 181
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+AGGTGI PM + + K+ +
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGIAPMRTYLWRMFKDAE 166
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 167 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 226
Query: 267 YISKDTA 273
YI A
Sbjct: 227 YIQDRVA 233
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 16/153 (10%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 174
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 175 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 234
Query: 267 YISKDTA-----LKGLPSPSDDALILVCGPPGM 294
YI A L L + +CGP GM
Sbjct: 235 YIQDRVAEHADQLWQLIK-NQKTHTYICGPRGM 266
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 10/160 (6%)
Query: 149 LLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVI 207
L +K P+G S LKPG V++ GP+ K P + + M+ GTGI P +
Sbjct: 122 LCVKRVPDGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFL 181
Query: 208 EAILKNPDDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWK 262
+ ++ Q + L G + P N ++ + V N K
Sbjct: 182 WKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDK 241
Query: 263 GGVGYISKDTALKGLP----SPSDDALILVCGPPGMMKHV 298
G YI A D+ + +CG GM K +
Sbjct: 242 GEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGI 281
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 174
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 175 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 234
Query: 267 YISKDTA 273
YI A
Sbjct: 235 YIQDRVA 241
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 174
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 175 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 234
Query: 267 YISKDTA 273
YI A
Sbjct: 235 YIQDRVA 241
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 166
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 167 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 226
Query: 267 YISKDTA 273
YI A
Sbjct: 227 YIQDRVA 233
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKKMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 174
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 175 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 234
Query: 267 YISKDTA 273
YI A
Sbjct: 235 YIQDRVA 241
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 166
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 167 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 226
Query: 267 YISKDTA 273
YI A
Sbjct: 227 YIQDRVA 233
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 166
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 167 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 226
Query: 267 YISKDTA 273
YI A
Sbjct: 227 YIQDRVA 233
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 166
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 167 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 226
Query: 267 YISKDTA 273
YI A
Sbjct: 227 YIQDRVA 233
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 174
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 175 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 234
Query: 267 YISKDTA 273
YI A
Sbjct: 235 YIQDRVA 241
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 115 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 174
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 175 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 234
Query: 267 YISKDTA 273
YI A
Sbjct: 235 YIQDRVA 241
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 175
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 176 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 235
Query: 267 YISKDTA 273
YI A
Sbjct: 236 YIQDRVA 242
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 58/154 (37%), Gaps = 12/154 (7%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S L+PGD V++ GP+ K P + I M+A GTGI P + +
Sbjct: 129 KGVCSNFLCDLQPGDNVQITGPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEK 188
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
D+ + + L G + P N +V Y V N G YI
Sbjct: 189 HDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKERAPENFRVDYAVSREQTNAAGERMYIQ 248
Query: 270 KDTA-----LKGLPSPSDDALILVCGPPGMMKHV 298
A L L D+ + +CG GM K +
Sbjct: 249 TRMAEYKEELWELLK-KDNTYVYMCGLKGMEKGI 281
>pdb|4EH1|A Chain A, Crystal Structure Of The Flavohem-Like-FadNAD BINDING
DOMAIN OF Nitric Oxide Dioxygenase From Vibrio Cholerae
O1 Biovar El Tor
pdb|4EH1|B Chain B, Crystal Structure Of The Flavohem-Like-FadNAD BINDING
DOMAIN OF Nitric Oxide Dioxygenase From Vibrio Cholerae
O1 Biovar El Tor
Length = 243
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 9/134 (6%)
Query: 165 SLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDNTQVSLLY 224
++K GD V++ P Y ++ + +I+ G G TPM ++ + K + + V+ LY
Sbjct: 92 NVKVGDSVKLYAPAGDFFYVER-ERPVVLISAGVGATPMQAILHTLAKQ--NKSGVTYLY 148
Query: 225 GNISPXXXXXXXXXXXXAASHPNLKVFYTVDNPTKNWKGGVGYISKDTALKGLPSPSDDA 284
S A ++ + D + G + L L P +D
Sbjct: 149 ACNSAKEHTFAQETAQLIAQQGWMQQVWYRDESADDVLQG------EMQLAELILPIEDG 202
Query: 285 LILVCGPPGMMKHV 298
+CGP G M++V
Sbjct: 203 DFYLCGPIGFMQYV 216
>pdb|3FPK|A Chain A, Crystal Structure Of Ferredoxin-Nadp Reductase From
Salmonella Typhimurium
pdb|3FPK|B Chain B, Crystal Structure Of Ferredoxin-Nadp Reductase From
Salmonella Typhimurium
Length = 251
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 98 FSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEG 157
F+ KLGL++ G+ + YV P P + + + P+G
Sbjct: 34 FTAGQFTKLGLEID---------GERVQRAYSYVNAPDNP--------NLEFYLVTVPQG 76
Query: 158 KMSQHFASLKPGDVVEVKGPIEK---LRYSPNMKKHIGMIAGGTGITPMLQVIE 208
K+S A+LKPGD V+V L P+ + + M+A GT I P L +++
Sbjct: 77 KLSPRLAALKPGDEVQVVSDASGFFVLDEVPDCET-LWMLATGTAIGPYLSILQ 129
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNM-KKHIGMIAGGTGITPMLQVIEAILKNPD 215
G S + ++PG V++ GP+ K P+ + ++ M+A GTGI PM + + K+ +
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPLGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAE 166
Query: 216 DNTQVS--------LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVG 266
L++G + +P N ++ Y + KN +GG
Sbjct: 167 RAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRM 226
Query: 267 YISKDTA 273
YI A
Sbjct: 227 YIQDRVA 233
>pdb|2PIA|A Chain A, Phthalate Dioxygenase Reductase: A Modular Structure For
Electron Transfer From Pyridine Nucleotides To [2fe-2s]
Length = 321
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 133 RPYTPISDTEAKGHFDLLIKVYPEGKMSQ--HFASLKPGDVVEVKGPIEKLRYSPNMKKH 190
R Y+ +D++ + + + +K G+ GD VEV P + K
Sbjct: 55 RTYSLCNDSQERNRYVIAVKRDSNGRGGSISFIDDTSEGDAVEVSLPRNEFPLDKRAKSF 114
Query: 191 IGMIAGGTGITPMLQVIEAI 210
I ++AGG GITPML + +
Sbjct: 115 I-LVAGGIGITPMLSMARQL 133
>pdb|1FDR|A Chain A, Flavodoxin Reductase From E. Coli
Length = 248
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 98 FSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEG 157
F+ KLGL++ G+ + YV P P + + P+G
Sbjct: 31 FTAGQFTKLGLEID---------GERVQRAYSYVNSPDNP--------DLEFYLVTVPDG 73
Query: 158 KMSQHFASLKPGDVVEVKGPIEK---LRYSPNMKKHIGMIAGGTGITPMLQVIE 208
K+S A+LKPGD V+V L P+ + + M+A GT I P L ++
Sbjct: 74 KLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCET-LWMLATGTAIGPYLSILR 126
>pdb|2QDX|A Chain A, P.Aeruginosa Fpr With Fad
pdb|3CRZ|A Chain A, Ferredoxin-Nadp Reductase
Length = 257
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 92 NSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLI 151
N LF F + L ++ +G + +G + ++R Y+ I+ + H +
Sbjct: 15 NDTLFSFKTTRNPGLRFKTGQFVM----IGLEVDG--RPLMRAYS-IASPNYEEHLEFFS 67
Query: 152 KVYPEGKMSQHFASLKPGDVVEV-KGPIEKLRYSPNMK-KHIGMIAGGTGITPMLQVIE 208
P+G ++ LK GD + V + P L + + KH+ +++ GTG+ P L VI+
Sbjct: 68 IKVPDGPLTSRLQHLKEGDELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQ 126
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 56/153 (36%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVI-EAILKN 213
+G S LKPG V++ GP+ K P + I M+ GTGI P + + +
Sbjct: 129 KGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEK 188
Query: 214 PDD---NTQVSLLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
DD N L G + P N ++ + V N KG YI
Sbjct: 189 HDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQ 248
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A + D+ + +CG GM K +
Sbjct: 249 TRMAQYAVELWEMLKKDNTYVYMCGLKGMEKGI 281
>pdb|3MVB|O Chain O, Crystal Structure Of A Triple Rfy Mutant Of Human Mterf1
Bound To The Termination Sequence
Length = 343
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 258 TKNWKGGVGYISKDTALKGLPSPSDDALILVCGPPGMMKHVSGEKAKDYSQGELSGILKD 317
TK K + ++ L S++ L+L+CGP + +S + A+ S + L
Sbjct: 196 TKRVKANIEFLRSTFNLN-----SEELLVLICGPGAEILDLSNDAAR-RSYANIKEKLFS 249
Query: 318 LGYTEQMVYKF 328
LG TE+ V KF
Sbjct: 250 LGCTEEEVQKF 260
>pdb|3N7Q|A Chain A, Crystal Structure Of Human Mitochondrial Mterf Fragment
(Aa 99-399) In Complex With A 12-Mer Dna Encompassing
The Trnaleu(Uur) Binding Sequence
Length = 310
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 252 YTVDNPTKNWKGGVGYISKDTALKGLPSPSDDALILVCGPPGMMKHVSGEKAKDYSQGEL 311
+ + TK K + ++ L S++ L+L+CGP + +S + A+ S +
Sbjct: 148 FILIQSTKRVKANIEFLRSTFNLN-----SEELLVLICGPGAEILDLSNDYAR-RSYANI 201
Query: 312 SGILKDLGYTEQMVYKF 328
L LG TE+ V KF
Sbjct: 202 KEKLFSLGCTEEEVQKF 218
>pdb|3N6S|A Chain A, Crystal Structure Of Human Mitochondrial Mterf In Complex
With A 15- Mer Dna Encompassing The Trnaleu(Uur) Binding
Sequence
Length = 353
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 252 YTVDNPTKNWKGGVGYISKDTALKGLPSPSDDALILVCGPPGMMKHVSGEKAKDYSQGEL 311
+ + TK K + ++ L S++ L+L+CGP + +S + A+ S +
Sbjct: 191 FILIQSTKRVKANIEFLRSTFNLN-----SEELLVLICGPGAEILDLSNDYAR-RSYANI 244
Query: 312 SGILKDLGYTEQMVYKF 328
L LG TE+ V KF
Sbjct: 245 KEKLFSLGCTEEEVQKF 261
>pdb|3MVA|O Chain O, Crystal Structure Of Human Mterf1 Bound To The Termination
Sequence
Length = 343
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 252 YTVDNPTKNWKGGVGYISKDTALKGLPSPSDDALILVCGPPGMMKHVSGEKAKDYSQGEL 311
+ + TK K + ++ L S++ L+L+CGP + +S + A+ S +
Sbjct: 190 FILIQSTKRVKANIEFLRSTFNLN-----SEELLVLICGPGAEILDLSNDYAR-RSYANI 243
Query: 312 SGILKDLGYTEQMVYKF 328
L LG TE+ V KF
Sbjct: 244 KEKLFSLGCTEEEVQKF 260
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + + M+ GTGI P + +
Sbjct: 123 KGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEK 182
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
++ Q + L G + P N ++ + V N KG YI
Sbjct: 183 HEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQ 242
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A D+ + +CG GM K +
Sbjct: 243 TRMAQYAEELWELLKKDNTFVYMCGVKGMEKGI 275
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + + M+ GTGI P + +
Sbjct: 110 KGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEK 169
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
++ Q + L G + P N ++ + V N KG YI
Sbjct: 170 HEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQ 229
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A D+ + +CG GM K +
Sbjct: 230 TRMAQYAEELWELLKKDNTFVYMCGLKGMEKGI 262
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + I M+ GTGI P + +
Sbjct: 129 KGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEK 188
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
D+ + + L G + P N ++ + V N KG YI
Sbjct: 189 HDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQ 248
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A + D+ +CG GM K +
Sbjct: 249 TRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGI 281
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + I M+ GTGI P + +
Sbjct: 129 KGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEK 188
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
D+ + + L G + P N ++ + V N KG YI
Sbjct: 189 HDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQ 248
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A + D+ +CG GM K +
Sbjct: 249 TRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGI 281
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + I M+ GTGI P + +
Sbjct: 129 KGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEK 188
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
D+ + + L G + P N ++ + V N KG YI
Sbjct: 189 HDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQ 248
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A + D+ +CG GM K +
Sbjct: 249 TRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGI 281
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + I M+ GTGI P + +
Sbjct: 129 KGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEK 188
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
D+ + + L G + P N ++ + V N KG YI
Sbjct: 189 HDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQ 248
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A + D+ +CG GM K +
Sbjct: 249 TRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGI 281
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + + M+ GTGI P + +
Sbjct: 123 KGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEK 182
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
++ Q + L G + P N ++ + V N KG YI
Sbjct: 183 HEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQ 242
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A D+ + +CG GM K +
Sbjct: 243 TRMAQYAEELWELLKKDNTFVYMCGLKGMEKGI 275
>pdb|2XNJ|A Chain A, Crystal Structure Of An Engineered Ferredoxin(Flavodoxin)
Nadp(H) Reductase (Fpr) From Escherichia Coli
pdb|2XNJ|B Chain B, Crystal Structure Of An Engineered Ferredoxin(Flavodoxin)
Nadp(H) Reductase (Fpr) From Escherichia Coli
Length = 266
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 98 FSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYP-- 155
F+ KLGL++ G+ + YV P P D E F L+ VY
Sbjct: 41 FTAGQFTKLGLEID---------GERVQRAYSYVNSPDNP--DLE----FYLVTVVYTND 85
Query: 156 -----EGKMSQHFASLKPGDVVEVKGPIEK---LRYSPNMKKHIGMIAGGTGITPMLQVI 207
+GK+S A+LKPGD V+V L P+ + + M+A GT I P L ++
Sbjct: 86 AGEVVKGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCET-LWMLATGTAIGPYLSIL 144
Query: 208 EAILKNPDDNTQVSLLY-GNISPXXXXXXXXXXXXAASHPNLKVFYTVDNPTK--NWKGG 264
+ K+ D + L++ + L++ V T + G
Sbjct: 145 R-LGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGSLTGR 203
Query: 265 VGYISKDTALK---GLPSPSDDALILVCGPPGMMK 296
+ + + L+ GLP + + +++CG P M++
Sbjct: 204 IPALIESGELESTIGLPMNKETSHVMLCGNPQMVR 238
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + + M+ GTGI P + +
Sbjct: 123 KGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEK 182
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
++ Q + L G + P N ++ + V N KG YI
Sbjct: 183 HEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQ 242
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A D+ + +CG GM K +
Sbjct: 243 TRMAQYAEELWELLKKDNTFVYMCGLKGMEKGI 275
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITP 202
+G S LKPG V++ GP+ K P + I M+A GTGI P
Sbjct: 129 KGVCSNFLCDLKPGAEVKITGPVGKEMLMPKDPNATIIMLATGTGIAP 176
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + + M+ GTGI P + +
Sbjct: 123 KGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEK 182
Query: 215 DDNTQVS----LLYGNISPXXXXXXXXXXXXAASHP-NLKVFYTVDNPTKNWKGGVGYIS 269
++ Q + L G + P N ++ + V N KG YI
Sbjct: 183 HEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQ 242
Query: 270 KDTALKGLP----SPSDDALILVCGPPGMMKHV 298
A D+ + +CG GM K +
Sbjct: 243 TRMAQYAEELWELLKKDNTFVYMCGLKGMEKGI 275
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 58/153 (37%), Gaps = 10/153 (6%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITPMLQVIEAILKNP 214
+G S LKPG V++ GP+ K P + + M+ GTGI P + +
Sbjct: 111 KGVCSNFLCDLKPGADVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEK 170
Query: 215 DDNTQ---VSLLYGNI--SPXXXXXXXXXXXXAASHPNLKVFYTVDNPTKNWKGGVGYIS 269
D+ + ++ L+ + S + N ++ + V N KG YI
Sbjct: 171 HDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQ 230
Query: 270 KDTALKGLPSPS----DDALILVCGPPGMMKHV 298
A + D+ + +CG GM + +
Sbjct: 231 TRMAQYAEELWTLLKKDNTFVYMCGLKGMEQGI 263
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK---KHIGMIAGGTGITPM 203
G S + KPGD +++ GP K+ P HI MIA GTG+ P
Sbjct: 132 GVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHI-MIATGTGVAPF 180
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK---KHIGMIAGGTGITPM 203
G S + KPGD +++ GP K+ P HI MIA GTG+ P
Sbjct: 127 GVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHI-MIATGTGVAPF 175
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 157 GKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK---KHIGMIAGGTGITPM 203
G S + KPGD +++ GP K+ P HI MIA GTG+ P
Sbjct: 127 GVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHI-MIATGTGVAPF 175
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITP 202
+G S LKPG V++ GP+ K P + + M+A GTGI P
Sbjct: 125 KGVCSNFLCDLKPGADVKITGPVGKEMLMPKDPNATVIMLATGTGIAP 172
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 156 EGKMSQHFASLKPGDVVEVKGPIEKLRYSP-NMKKHIGMIAGGTGITP 202
+G S LKPG V++ GP+ K P + + M+ GTGI P
Sbjct: 123 KGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAP 170
>pdb|1A8P|A Chain A, Ferredoxin Reductase From Azotobacter Vinelandii
Length = 258
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 92 NSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLI 151
N LF F + L + ++ +G + +G + ++R Y+ I+ + H +
Sbjct: 16 NDTLFSFKTTRNPSLRFENGQFVM----IGLEVDG--RPLMRAYS-IASPNYEEHLEFFS 68
Query: 152 KVYPEGKMSQHFASLKPGDVVEV-KGPIEKLRYSPNMK-KHIGMIAGGTGITPMLQVIE 208
G ++ LK GD + V + P L S + KH+ M++ GTG+ P + +I+
Sbjct: 69 IKVQNGPLTSRLQHLKEGDELMVSRKPTGTLVTSDLLPGKHLYMLSTGTGLAPFMSLIQ 127
>pdb|3Q8M|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a)
In Complex With Substrate 5'-Flap Dna And K+
pdb|3Q8M|B Chain B, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a)
In Complex With Substrate 5'-Flap Dna And K+
Length = 341
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 279 SPSDDALILVCGPPGMMKHVSGEKAKDYSQGE--LSGILKDLGYTEQ 323
+ ++D L G P +M+H++ +AK E LS IL++LG ++
Sbjct: 174 AATEDMACLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQE 220
>pdb|1GVH|A Chain A, The X-Ray Structure Of Ferric Escherichia Coli
Flavohemoglobin Reveals An Unespected Geometry Of The
Distal Heme Pocket
Length = 396
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 125 EGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFAS-LKPGDVVEVKGPIEKLRY 183
EG +R Y+ + KG + + +K G++S + GDVV++ P
Sbjct: 196 EGFPHQEIRQYSLTRKPDGKG-YRIAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFM 254
Query: 184 SPNMKKHIGMIAGGTGITPMLQVIEAILK 212
+ + +I+ G G TPML +++ + K
Sbjct: 255 AVADDTPVTLISAGVGQTPMLAMLDTLAK 283
>pdb|4G1B|A Chain A, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|B Chain B, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|C Chain C, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1B|D Chain D, X-Ray Structure Of Yeast Flavohemoglobin In Complex With
Econazole
pdb|4G1V|A Chain A, X-Ray Structure Of Yeast Flavohemoglobin
Length = 399
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 78 WIGFK-LQDTARVSHNSHLFRFSFDPSAKLGLDVASCILT--------RAPLGQDAEGNT 128
W G+K + TA+ S + F+ P G+++ S +T P+ Q+ N
Sbjct: 146 WPGWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQE---NQ 202
Query: 129 KYVVRPYTPISDTEAKGHFDLLIKV------YPEGKMSQHF-ASLKPGDVVEVKGPIEKL 181
+R Y+ S + G +K+ +P G +S++ K GD +++ P
Sbjct: 203 YDALRHYSLCSASTKNG-LRFAVKMEAARENFPAGLVSEYLHKDAKVGDEIKLSAPAGDF 261
Query: 182 RYSPNMKKH----IGMIAGGTGITPMLQVIEAILK-NPD 215
+ + + +++ G G+TP+L ++E +K NP+
Sbjct: 262 AINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNPN 300
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,504,350
Number of Sequences: 62578
Number of extensions: 449637
Number of successful extensions: 1187
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 1072
Number of HSP's gapped (non-prelim): 93
length of query: 328
length of database: 14,973,337
effective HSP length: 99
effective length of query: 229
effective length of database: 8,778,115
effective search space: 2010188335
effective search space used: 2010188335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)