Your job contains 1 sequence.
>020298
MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI
HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV
ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL
VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVL
SWPLRFARYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSG
NDLSSDQLSRHSNIPLEELRHRRIERFG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020298
(328 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716534 - symbol:RBL14 "RHOMBOID-like prote... 1079 3.4e-109 1
UNIPROTKB|E2R6X6 - symbol:RHBDD1 "Uncharacterized protein... 306 5.3e-30 2
UNIPROTKB|E2RD89 - symbol:RHBDD1 "Uncharacterized protein... 306 5.3e-30 2
ZFIN|ZDB-GENE-050417-85 - symbol:rhbdd1 "rhomboid domain ... 293 4.7e-29 2
MGI|MGI:1924117 - symbol:Rhbdd1 "rhomboid domain containi... 293 9.6e-29 2
UNIPROTKB|Q5RBS4 - symbol:RHBDD1 "Rhomboid-related protei... 289 4.1e-28 2
UNIPROTKB|Q8TEB9 - symbol:RHBDD1 "Rhomboid-related protei... 302 7.3e-27 1
RGD|1306477 - symbol:Rhbdd1 "rhomboid domain containing 1... 277 7.4e-27 2
UNIPROTKB|Q4V8F3 - symbol:Rhbdd1 "Rhomboid-related protei... 277 7.4e-27 2
UNIPROTKB|F1SNP2 - symbol:RHBDD1 "Uncharacterized protein... 286 3.6e-25 1
UNIPROTKB|F1MQC7 - symbol:RHBDD1 "Uncharacterized protein... 283 7.6e-25 1
UNIPROTKB|Q08DF5 - symbol:RHBDD1 "Rhomboid domain contain... 283 7.6e-25 1
UNIPROTKB|E1BT32 - symbol:RHBDD1 "Uncharacterized protein... 281 1.2e-24 1
UNIPROTKB|C9K011 - symbol:RHBDD1 "Rhomboid-related protei... 221 2.8e-18 1
UNIPROTKB|C9J1R4 - symbol:RHBDD1 "Rhomboid-related protei... 176 3.3e-13 1
UNIPROTKB|C9JQK8 - symbol:RHBDD1 "Rhomboid-related protei... 169 2.0e-12 1
DICTYBASE|DDB_G0281359 - symbol:DDB_G0281359 species:4468... 126 2.3e-05 1
SGD|S000006167 - symbol:RBD2 "Possible rhomboid protease"... 111 0.00065 1
>TAIR|locus:1005716534 [details] [associations]
symbol:RBL14 "RHOMBOID-like protein 14" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001876 InterPro:IPR022764 Pfam:PF00641
Pfam:PF01694 PROSITE:PS01358 PROSITE:PS50199 SMART:SM00547
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0004252 GO:GO:0005622
EMBL:AB022219 MEROPS:S54.008 eggNOG:NOG312545 KO:K09651
HOGENOM:HOG000272713 EMBL:AY080647 EMBL:AY117194 EMBL:AK175222
IPI:IPI00521732 RefSeq:NP_850606.1 UniGene:At.6283
ProteinModelPortal:Q8RXW0 SMR:Q8RXW0 STRING:Q8RXW0
EnsemblPlants:AT3G17611.1 GeneID:821028 KEGG:ath:AT3G17611
TAIR:At3g17611 InParanoid:Q8RXW0 OMA:MSQGITL PhylomeDB:Q8RXW0
ProtClustDB:CLSN2679923 Genevestigator:Q8RXW0 Uniprot:Q8RXW0
Length = 334
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 208/333 (62%), Positives = 250/333 (75%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
ME G G R GMLPLLAL A EY+RLPWKPPVTA+LLA NTL+YLRPAF+D ++P I
Sbjct: 1 MENFGEGRRSGGGMLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHI 60
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
EVWFNPHLI K+KDLKR FLS FYH +E HL YNMMSLLWKGI+LETSMGS+EFA+MV
Sbjct: 61 SEVWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVF 120
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL 180
L+GMSQG+TLLLAKSL+L FDY+RAYY+EYAVGFSGVLFAMKVVLNS++EDY++V+G+L
Sbjct: 121 TLIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGIL 180
Query: 181 VPARYAAWAELIIIQMFVPGVSFXXXXXXXXXXXXXXXXXXXXXXXDPLTTIIRGATGVL 240
VP +YAAWAELI++QMFVP SF DP+T +RG + ++
Sbjct: 181 VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLV 240
Query: 241 SWPLRFARYLFR--RPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR 298
+WPLRF + R R RI GRG VG T P IWRC +CT+DNSGWLS CEMCG+ R
Sbjct: 241 TWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGSGR 300
Query: 299 S-GNDLSSDQ---LSRHSNIPLEELRHRRIERF 327
+ GN S +Q LS +++PL+ELR RR+ERF
Sbjct: 301 ARGNGWSLNQGPALSSSNDLPLDELRRRRVERF 333
>UNIPROTKB|E2R6X6 [details] [associations]
symbol:RHBDD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
CTD:84236 KO:K09651 OMA:LHHADDW GeneTree:ENSGT00390000010744
EMBL:AAEX03014411 RefSeq:XP_543275.2 Ensembl:ENSCAFT00000039581
GeneID:486149 KEGG:cfa:486149 Uniprot:E2R6X6
Length = 316
Score = 306 (112.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 79/197 (40%), Positives = 107/197 (54%)
Query: 9 RVSRGMLPLLALHAFNEYH-RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNP 67
R SRG+ L L +H + PPVT A LA N +L P L P ++E +
Sbjct: 3 RRSRGINAGLILLLSQIFHVGINNIPPVTLATLALNVWFFLNP-----LKP-LYESCLSV 56
Query: 68 HLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQ 127
+ KD +R LSP +HA + HL++NM S+LWKGI LE +GS FA ++V ++
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIVTFSLLTG 116
Query: 128 GITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYA 186
+ L L +L F D E + AVGFSGVLFA+KV+ N + N+ G VP R+A
Sbjct: 117 VVYLFLEFALAEFTD-EPGFRRNCAVGFSGVLFALKVLNNHYCPGGFANILGFPVPNRFA 175
Query: 187 AWAELIIIQMFVPGVSF 203
WAEL+ I PG SF
Sbjct: 176 CWAELVAIHFISPGTSF 192
Score = 41 (19.5 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 315 PLEELRHRRIERF 327
P EE+R +R+ RF
Sbjct: 301 PEEEMRRKRLHRF 313
>UNIPROTKB|E2RD89 [details] [associations]
symbol:RHBDD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051047 "positive regulation of secretion"
evidence=IEA] [GO:0048515 "spermatid differentiation" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0044322 "endoplasmic reticulum quality control
compartment" evidence=IEA] [GO:0043687 "post-translational protein
modification" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0034620 "cellular response to unfolded
protein" evidence=IEA] [GO:0031293 "membrane protein intracellular
domain proteolysis" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0010954 "positive
regulation of protein processing" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
GO:GO:0051047 GO:GO:0045732 GO:GO:0033619
GeneTree:ENSGT00390000010744 EMBL:AAEX03014411
Ensembl:ENSCAFT00000016536 Uniprot:E2RD89
Length = 316
Score = 306 (112.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 79/197 (40%), Positives = 107/197 (54%)
Query: 9 RVSRGMLPLLALHAFNEYH-RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNP 67
R SRG+ L L +H + PPVT A LA N +L P L P ++E +
Sbjct: 3 RRSRGINAGLILLLSQIFHVGINNIPPVTLATLALNVWFFLNP-----LKP-LYESCLSV 56
Query: 68 HLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQ 127
+ KD +R LSP +HA + HL++NM S+LWKGI LE +GS FA ++V ++
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIVTFSLLTG 116
Query: 128 GITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYA 186
+ L L +L F D E + AVGFSGVLFA+KV+ N + N+ G VP R+A
Sbjct: 117 VVYLFLEFALAEFTD-EPGFRRNCAVGFSGVLFALKVLNNHYCPGGFANILGFPVPNRFA 175
Query: 187 AWAELIIIQMFVPGVSF 203
WAEL+ I PG SF
Sbjct: 176 CWAELVAIHFISPGTSF 192
Score = 41 (19.5 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 315 PLEELRHRRIERF 327
P EE+R +R+ RF
Sbjct: 301 PEEEMRRKRLHRF 313
>ZFIN|ZDB-GENE-050417-85 [details] [associations]
symbol:rhbdd1 "rhomboid domain containing 1"
species:7955 "Danio rerio" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR022764 Pfam:PF01694
ZFIN:ZDB-GENE-050417-85 GO:GO:0016021 GO:GO:0004252 CTD:84236
eggNOG:NOG312545 HOVERGEN:HBG054446 KO:K09651 HOGENOM:HOG000272713
OrthoDB:EOG4894MT EMBL:BC092835 IPI:IPI00502362
RefSeq:NP_001017614.1 UniGene:Dr.92577 ProteinModelPortal:Q568J3
GeneID:550277 KEGG:dre:550277 InParanoid:Q568J3 NextBio:20879539
Uniprot:Q568J3
Length = 335
Score = 293 (108.2 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 67/174 (38%), Positives = 99/174 (56%)
Query: 33 PPVTAALLATNTLIYLRP--AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A L N ++L P L++ + S+ E ++ Y+D R LSPF+H +
Sbjct: 28 PPVTLATLGLNVYLFLFPFKPLLETCL-SVREAYW-------YRDWSRLLLSPFHHVDDM 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM LLWKGI+LE +G FA ++ ++ + G LL ++ + + +Y +
Sbjct: 80 HLYFNMALLLWKGIRLEKKLGGPWFAYLL-SVFSLLTGFVYLLLETGLTHMTEDSSYSLQ 138
Query: 151 YAVGFSGVLFAMKVVLNS-RSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
AVGFSGVLF +KVV N TN+ GL + RYA W EL++I + PG SF
Sbjct: 139 CAVGFSGVLFGLKVVNNHYHPGGATNIMGLPIANRYACWVELVLIHIMNPGTSF 192
Score = 45 (20.9 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 312 SNIPLEELRHRRIERF 327
SN EE+R RRI+RF
Sbjct: 318 SNPSPEEIRWRRIQRF 333
>MGI|MGI:1924117 [details] [associations]
symbol:Rhbdd1 "rhomboid domain containing 1" species:10090
"Mus musculus" [GO:0004175 "endopeptidase activity"
evidence=ISO;ISS] [GO:0004252 "serine-type endopeptidase activity"
evidence=ISO;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] [GO:0010954 "positive regulation of protein
processing" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IDA] [GO:0031293 "membrane
protein intracellular domain proteolysis" evidence=IDA] [GO:0033619
"membrane protein proteolysis" evidence=ISO;ISS] [GO:0034620
"cellular response to unfolded protein" evidence=IDA] [GO:0034644
"cellular response to UV" evidence=IDA] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO;IMP] [GO:0043687
"post-translational protein modification" evidence=IDA] [GO:0044322
"endoplasmic reticulum quality control compartment" evidence=IDA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO;ISS] [GO:0048515 "spermatid differentiation"
evidence=IMP] [GO:0051047 "positive regulation of secretion"
evidence=ISO;ISS] [GO:2000254 "regulation of male germ cell
proliferation" evidence=IMP] InterPro:IPR022764 Pfam:PF01694
MGI:MGI:1924117 GO:GO:0005739 GO:GO:0006915 GO:GO:0043066
GO:GO:0004252 GO:GO:0030176 GO:GO:0051047 GO:GO:0031293
GO:GO:0010954 GO:GO:0030433 GO:GO:0043687 GO:GO:0034644
GO:GO:0045732 GO:GO:0034620 GO:GO:0048515 GO:GO:0044322 CTD:84236
eggNOG:NOG312545 HOVERGEN:HBG054446 KO:K09651 OMA:LHHADDW
EMBL:AY973322 EMBL:AK015167 EMBL:AK029751 EMBL:AK076751
EMBL:AK079448 EMBL:AK142277 EMBL:BC005518 IPI:IPI00319986
RefSeq:NP_001116157.1 RefSeq:NP_084053.3 UniGene:Mm.226994
ProteinModelPortal:Q8BHC7 MEROPS:S54.954 PhosphoSite:Q8BHC7
PaxDb:Q8BHC7 PRIDE:Q8BHC7 Ensembl:ENSMUST00000027322
Ensembl:ENSMUST00000165975 GeneID:76867 KEGG:mmu:76867
UCSC:uc007brq.2 GeneTree:ENSGT00390000010744 HOGENOM:HOG000272713
InParanoid:Q8BHC7 OrthoDB:EOG4894MT NextBio:345969 Bgee:Q8BHC7
CleanEx:MM_RHBDD1 Genevestigator:Q8BHC7
GermOnline:ENSMUSG00000026142 Uniprot:Q8BHC7
Length = 315
Score = 293 (108.2 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 68/172 (39%), Positives = 93/172 (54%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P P H + + KD +R LSP +H + HL
Sbjct: 28 PPVTLATLAVNVWFFLNP-----WKPLYHSC-ISVEKCYQQKDWQRLLLSPLHHGDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS FA V+A + G+ LL + V + + A
Sbjct: 82 YFNMVSMLWKGVKLERRLGSRWFA-YVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL+ I PG SF
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELVAIHFCTPGTSF 192
Score = 42 (19.8 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 314 IPLEELRHRRIERF 327
+P EE+R +R+ RF
Sbjct: 299 LPPEEMRRQRLHRF 312
>UNIPROTKB|Q5RBS4 [details] [associations]
symbol:RHBDD1 "Rhomboid-related protein 4" species:9601
"Pongo abelii" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0004252 "serine-type endopeptidase activity" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=ISS]
[GO:0010954 "positive regulation of protein processing"
evidence=ISS] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=ISS] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISS] [GO:0031293 "membrane protein
intracellular domain proteolysis" evidence=ISS] [GO:0033619
"membrane protein proteolysis" evidence=ISS] [GO:0034620 "cellular
response to unfolded protein" evidence=ISS] [GO:0034644 "cellular
response to UV" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0043687 "post-translational
protein modification" evidence=ISS] [GO:0044322 "endoplasmic
reticulum quality control compartment" evidence=ISS] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISS]
[GO:0048515 "spermatid differentiation" evidence=ISS] [GO:0051047
"positive regulation of secretion" evidence=ISS] [GO:2000254
"regulation of male germ cell proliferation" evidence=ISS]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0005739 GO:GO:0006915
GO:GO:0043066 GO:GO:0004252 GO:GO:0030176 GO:GO:0051047
GO:GO:0031293 GO:GO:0010954 GO:GO:0030433 GO:GO:0043687
GO:GO:0034644 GO:GO:0045732 GO:GO:0034620 GO:GO:0048515
GO:GO:0044322 CTD:84236 HOVERGEN:HBG054446 KO:K09651 EMBL:CR858560
RefSeq:NP_001125444.1 UniGene:Pab.10117 ProteinModelPortal:Q5RBS4
GeneID:100172352 KEGG:pon:100172352 InParanoid:Q5RBS4
Uniprot:Q5RBS4
Length = 318
Score = 289 (106.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 77/198 (38%), Positives = 105/198 (53%)
Query: 9 RVSRGMLPLLALHAFNEYH-RLPWKPPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFN 66
R SRG+ L L +H + PPVT A LA N +L P L S S+ + +
Sbjct: 3 RRSRGINTGLILLLSQIFHVGINNIPPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-- 60
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
+ +D +R LSP +HA + HL++N S+LWKGI LE +GS FA V+ +
Sbjct: 61 -----QQRDWQRLLLSPLHHADDWHLYFNTASVLWKGINLERRLGSRWFA-YVITTFSVL 114
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARY 185
G+ LL + V F E + AVGFSGVLFA+KV+ N + N+ G VP R+
Sbjct: 115 TGVVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRF 174
Query: 186 AAWAELIIIQMFVPGVSF 203
A W EL+ I +F PG SF
Sbjct: 175 ACWVELVAIHLFSPGTSF 192
Score = 40 (19.1 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 315 PLEELRHRRIERF 327
P EE+R +R+ RF
Sbjct: 303 PEEEMRRQRLHRF 315
>UNIPROTKB|Q8TEB9 [details] [associations]
symbol:RHBDD1 "Rhomboid-related protein 4" species:9606
"Homo sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA;IDA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0034644 "cellular
response to UV" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS;IMP;IDA] [GO:0048515 "spermatid
differentiation" evidence=ISS] [GO:2000254 "regulation of male germ
cell proliferation" evidence=ISS] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IMP;IDA] [GO:0033619
"membrane protein proteolysis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0051047 "positive regulation of secretion"
evidence=IMP] [GO:0010954 "positive regulation of protein
processing" evidence=ISS] [GO:0031293 "membrane protein
intracellular domain proteolysis" evidence=ISS] [GO:0034620
"cellular response to unfolded protein" evidence=ISS] [GO:0043687
"post-translational protein modification" evidence=ISS] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISS] [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=ISS]
[GO:0044322 "endoplasmic reticulum quality control compartment"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] InterPro:IPR022764 Pfam:PF01694 GO:GO:0005739
GO:GO:0006915 GO:GO:0043066 GO:GO:0004252 GO:GO:0030176
GO:GO:0051047 GO:GO:0031293 GO:GO:0010954 GO:GO:0030433
GO:GO:0043687 GO:GO:0034644 GO:GO:0045732 GO:GO:0034620
GO:GO:0048515 GO:GO:0033619 EMBL:AC073149 GO:GO:0044322
EMBL:AY640233 EMBL:AK074258 EMBL:AC010735 EMBL:BC027900
EMBL:BC062636 EMBL:BC089404 EMBL:BC101262 EMBL:BC101263
EMBL:BC101264 EMBL:BC101265 EMBL:BC111056 EMBL:AL512717
IPI:IPI00152700 IPI:IPI00790369 RefSeq:NP_001161080.1
RefSeq:NP_115652.2 UniGene:Hs.471514 ProteinModelPortal:Q8TEB9
STRING:Q8TEB9 MEROPS:S54.008 PhosphoSite:Q8TEB9 DMDM:74723955
PRIDE:Q8TEB9 Ensembl:ENST00000341329 Ensembl:ENST00000392062
GeneID:84236 KEGG:hsa:84236 UCSC:uc002voi.3 UCSC:uc002voj.3
CTD:84236 GeneCards:GC02P227700 HGNC:HGNC:23081 HPA:HPA013972
neXtProt:NX_Q8TEB9 PharmGKB:PA143485593 eggNOG:NOG312545
HOVERGEN:HBG054446 InParanoid:Q8TEB9 KO:K09651 OMA:LHHADDW
PhylomeDB:Q8TEB9 ChiTaRS:RHBDD1 GenomeRNAi:84236 NextBio:73704
ArrayExpress:Q8TEB9 Bgee:Q8TEB9 CleanEx:HS_RHBDD1
Genevestigator:Q8TEB9 Uniprot:Q8TEB9
Length = 315
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 79/198 (39%), Positives = 109/198 (55%)
Query: 9 RVSRGMLPLLALHAFNEYH-RLPWKPPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFN 66
R SRG+ L L +H + PPVT A LA N +L P L S S+ + +
Sbjct: 3 RRSRGINTGLILLLSQIFHVGINNIPPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-- 60
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
+ KD +R LSP +HA + HL++NM S+LWKGI LE +GS FA ++ A ++
Sbjct: 61 -----QQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITAFSVLT 115
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARY 185
+ LLL ++ F D E + AVGFSGVLFA+KV+ N + N+ G VP R+
Sbjct: 116 GVVYLLLQFAVAEFMD-EPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRF 174
Query: 186 AAWAELIIIQMFVPGVSF 203
A W EL+ I +F PG SF
Sbjct: 175 ACWVELVAIHLFSPGTSF 192
>RGD|1306477 [details] [associations]
symbol:Rhbdd1 "rhomboid domain containing 1" species:10116
"Rattus norvegicus" [GO:0004175 "endopeptidase activity"
evidence=ISO;ISS] [GO:0004252 "serine-type endopeptidase activity"
evidence=ISO;ISS] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=ISO;ISS]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0010954 "positive
regulation of protein processing" evidence=ISO;ISS] [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=ISO;ISS]
[GO:0030433 "ER-associated protein catabolic process"
evidence=ISO;ISS] [GO:0031293 "membrane protein intracellular
domain proteolysis" evidence=ISO;ISS] [GO:0033619 "membrane protein
proteolysis" evidence=ISO;ISS] [GO:0034620 "cellular response to
unfolded protein" evidence=ISO;ISS] [GO:0034644 "cellular response
to UV" evidence=ISO;ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO;ISS] [GO:0043687
"post-translational protein modification" evidence=ISO;ISS]
[GO:0044322 "endoplasmic reticulum quality control compartment"
evidence=ISO;ISS] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO;ISS] [GO:0048515 "spermatid
differentiation" evidence=ISO;ISS] [GO:0051047 "positive regulation
of secretion" evidence=ISO;ISS] [GO:2000254 "regulation of male
germ cell proliferation" evidence=ISO;ISS] InterPro:IPR022764
Pfam:PF01694 RGD:1306477 GO:GO:0005739 GO:GO:0006915 GO:GO:0043066
GO:GO:0004252 GO:GO:0030176 GO:GO:0051047 GO:GO:0031293
GO:GO:0010954 GO:GO:0030433 GO:GO:0043687 GO:GO:0034644
GO:GO:0045732 GO:GO:0034620 GO:GO:0048515 GO:GO:0044322 CTD:84236
eggNOG:NOG312545 HOVERGEN:HBG054446 KO:K09651 OMA:LHHADDW
GeneTree:ENSGT00390000010744 HOGENOM:HOG000272713 OrthoDB:EOG4894MT
EMBL:BC097416 IPI:IPI00362973 RefSeq:NP_001020062.1
UniGene:Rn.55926 ProteinModelPortal:Q4V8F3 PRIDE:Q4V8F3
Ensembl:ENSRNOT00000019898 GeneID:316557 KEGG:rno:316557
UCSC:RGD:1306477 InParanoid:Q4V8F3 NextBio:671005
Genevestigator:Q4V8F3 GermOnline:ENSRNOG00000014620 Uniprot:Q4V8F3
Length = 316
Score = 277 (102.6 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 65/172 (37%), Positives = 90/172 (52%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P P H + + D +R LSP +H + HL
Sbjct: 28 PPVTLATLAVNVWFFLNP-----WKPLYHSC-ISVEKCYQQNDWQRLLLSPVHHGDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS FA ++A + G+ LL + + + A
Sbjct: 82 YFNMVSMLWKGVKLEKRLGSRWFA-YIIATFSLLTGVVYLLLQFASAELMNQPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL I PG SF
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELAAIHFCTPGTSF 192
Score = 40 (19.1 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 315 PLEELRHRRIERF 327
P EE+R +R+ RF
Sbjct: 301 PEEEMRRQRLHRF 313
>UNIPROTKB|Q4V8F3 [details] [associations]
symbol:Rhbdd1 "Rhomboid-related protein 4" species:10116
"Rattus norvegicus" [GO:0033619 "membrane protein proteolysis"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISS] InterPro:IPR022764 Pfam:PF01694
RGD:1306477 GO:GO:0005739 GO:GO:0006915 GO:GO:0043066 GO:GO:0004252
GO:GO:0030176 GO:GO:0051047 GO:GO:0031293 GO:GO:0010954
GO:GO:0030433 GO:GO:0043687 GO:GO:0034644 GO:GO:0045732
GO:GO:0034620 GO:GO:0048515 GO:GO:0044322 CTD:84236
eggNOG:NOG312545 HOVERGEN:HBG054446 KO:K09651 OMA:LHHADDW
GeneTree:ENSGT00390000010744 HOGENOM:HOG000272713 OrthoDB:EOG4894MT
EMBL:BC097416 IPI:IPI00362973 RefSeq:NP_001020062.1
UniGene:Rn.55926 ProteinModelPortal:Q4V8F3 PRIDE:Q4V8F3
Ensembl:ENSRNOT00000019898 GeneID:316557 KEGG:rno:316557
UCSC:RGD:1306477 InParanoid:Q4V8F3 NextBio:671005
Genevestigator:Q4V8F3 GermOnline:ENSRNOG00000014620 Uniprot:Q4V8F3
Length = 316
Score = 277 (102.6 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 65/172 (37%), Positives = 90/172 (52%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P P H + + D +R LSP +H + HL
Sbjct: 28 PPVTLATLAVNVWFFLNP-----WKPLYHSC-ISVEKCYQQNDWQRLLLSPVHHGDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS FA ++A + G+ LL + + + A
Sbjct: 82 YFNMVSMLWKGVKLEKRLGSRWFA-YIIATFSLLTGVVYLLLQFASAELMNQPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL I PG SF
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELAAIHFCTPGTSF 192
Score = 40 (19.1 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 315 PLEELRHRRIERF 327
P EE+R +R+ RF
Sbjct: 301 PEEEMRRQRLHRF 313
>UNIPROTKB|F1SNP2 [details] [associations]
symbol:RHBDD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051047 "positive regulation of secretion"
evidence=IEA] [GO:0048515 "spermatid differentiation" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0044322 "endoplasmic reticulum quality control
compartment" evidence=IEA] [GO:0043687 "post-translational protein
modification" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0034620 "cellular response to unfolded
protein" evidence=IEA] [GO:0031293 "membrane protein intracellular
domain proteolysis" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0010954 "positive
regulation of protein processing" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
GO:GO:0051047 GO:GO:0045732 GO:GO:0033619
GeneTree:ENSGT00390000010744 EMBL:CU928732
Ensembl:ENSSSCT00000017687 OMA:IHEEQFY Uniprot:F1SNP2
Length = 189
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 79/195 (40%), Positives = 102/195 (52%)
Query: 9 RVSRGMLPLLALHAFNEYH-RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNP 67
R SRG+ L L YH + PPVT A LA N +L P L L S V
Sbjct: 3 RRSRGINVGLLLLLSQIYHVGINNIPPVTVATLALNIWFFLNP--LKPLFSSCLSV---- 56
Query: 68 HLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQ 127
+ KD +R LSP +H + HL++NM S+LWKGI LE +GS FA ++A +
Sbjct: 57 EKCYQQKDWQRLLLSPLHHVDDWHLYFNMASMLWKGINLERRLGSRWFA-YIIATFSLLT 115
Query: 128 GIT-LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARY 185
G+ LLL +L D E + AVGFSGVLFA+KV+ N + NV G VP ++
Sbjct: 116 GVVYLLLEFALAELLD-EPGFRRNCAVGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNKF 174
Query: 186 AAWAELIIIQMFVPG 200
A WAEL+ I PG
Sbjct: 175 ACWAELLAIHFISPG 189
>UNIPROTKB|F1MQC7 [details] [associations]
symbol:RHBDD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051047 "positive regulation of secretion"
evidence=IEA] [GO:0048515 "spermatid differentiation" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0044322 "endoplasmic reticulum quality control
compartment" evidence=IEA] [GO:0043687 "post-translational protein
modification" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0034620 "cellular response to unfolded
protein" evidence=IEA] [GO:0031293 "membrane protein intracellular
domain proteolysis" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0010954 "positive
regulation of protein processing" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
GO:GO:0051047 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
GO:GO:0045732 GO:GO:0033619 OMA:LHHADDW
GeneTree:ENSGT00390000010744 EMBL:DAAA02006104 EMBL:AAFC03078460
EMBL:AAFC03078461 EMBL:AAFC03078463 EMBL:AAFC03078464
EMBL:AAFC03078465 EMBL:AAFC03123017 EMBL:AAFC03126611
EMBL:AAFC03128660 EMBL:AAFC03130989 EMBL:DAAA02006102
EMBL:DAAA02006103 IPI:IPI00826427 Ensembl:ENSBTAT00000032973
Uniprot:F1MQC7
Length = 322
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 70/174 (40%), Positives = 97/174 (55%)
Query: 33 PPVTAALLATNTLIYLRPA--FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A LA N +L P L S + S+ + ++ KD +R LSP +HA +
Sbjct: 28 PPVTLATLALNIWFFLNPLKPLLSSCL-SVEKCYYQ-------KDWQRLLLSPLHHADDW 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM+S+LWKGI LE +GS FA ++V ++ + L L +L F + E +
Sbjct: 80 HLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFALAEFLN-EPDFKRN 138
Query: 151 YAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
AVGFSGVLFA+KV+ N + NV G V R+A W EL+ I PG SF
Sbjct: 139 CAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFACWVELLAIHFISPGTSF 192
>UNIPROTKB|Q08DF5 [details] [associations]
symbol:RHBDD1 "Rhomboid domain containing 1" species:9913
"Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
CTD:84236 HOVERGEN:HBG054446 KO:K09651 GeneTree:ENSGT00390000010744
HOGENOM:HOG000272713 EMBL:DAAA02006104 EMBL:DAAA02006102
EMBL:DAAA02006103 EMBL:BC123777 IPI:IPI00698224
RefSeq:NP_001071463.1 UniGene:Bt.103237 UniGene:Bt.44404
Ensembl:ENSBTAT00000053543 GeneID:533985 KEGG:bta:533985
NextBio:20876219 Uniprot:Q08DF5
Length = 267
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 70/174 (40%), Positives = 97/174 (55%)
Query: 33 PPVTAALLATNTLIYLRPA--FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A LA N +L P L S + S+ + ++ KD +R LSP +HA +
Sbjct: 28 PPVTLATLALNIWFFLNPLKPLLSSCL-SVEKCYYQ-------KDWQRLLLSPLHHADDW 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM+S+LWKGI LE +GS FA ++V ++ + L L +L F + E +
Sbjct: 80 HLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFALAEFLN-EPDFKRN 138
Query: 151 YAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
AVGFSGVLFA+KV+ N + NV G V R+A W EL+ I PG SF
Sbjct: 139 CAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFACWVELLAIHFISPGTSF 192
>UNIPROTKB|E1BT32 [details] [associations]
symbol:RHBDD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0010954 "positive regulation of protein
processing" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0031293 "membrane
protein intracellular domain proteolysis" evidence=IEA] [GO:0034620
"cellular response to unfolded protein" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043687
"post-translational protein modification" evidence=IEA] [GO:0044322
"endoplasmic reticulum quality control compartment" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0048515 "spermatid differentiation" evidence=IEA]
[GO:0051047 "positive regulation of secretion" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
GO:GO:0051047 GO:GO:0045732 GO:GO:0033619 OMA:LHHADDW
GeneTree:ENSGT00390000010744 EMBL:AADN02024121 EMBL:AADN02024122
IPI:IPI00601747 Ensembl:ENSGALT00000007949 Uniprot:E1BT32
Length = 239
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 73/204 (35%), Positives = 113/204 (55%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
M+R G RV+ G+L L L+ ++ L P VT A+L N +L P + P +
Sbjct: 1 MQRRQG--RVNAGLL--LLLYQISQVG-LQNIPSVTLAVLILNVFFFLNP-----MRP-L 49
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
HE + ++ +R LSP +H + HL+YNM+S+LWKGI LE +GS FA ++
Sbjct: 50 HEACISVKEAFYRQNWQRLLLSPVHHVDDWHLYYNMVSMLWKGITLERKLGSMWFA-YII 108
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGL 179
A+ + GI +L + +++ + +Y AVGFSGVLFA+KV+ N + ++V GL
Sbjct: 109 AVFSVLTGIVYVLLEFMLVKILNDPSYEMSCAVGFSGVLFALKVLNNHYNPGRVSSVLGL 168
Query: 180 LVPARYAAWAELIIIQMFVPGVSF 203
+ ++YA W EL+ I P SF
Sbjct: 169 QISSKYACWVELVAIHFIAPRTSF 192
>UNIPROTKB|C9K011 [details] [associations]
symbol:RHBDD1 "Rhomboid-related protein 4" species:9606
"Homo sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0010954 "positive regulation of protein
processing" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0031293 "membrane
protein intracellular domain proteolysis" evidence=IEA] [GO:0034620
"cellular response to unfolded protein" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043687
"post-translational protein modification" evidence=IEA] [GO:0044322
"endoplasmic reticulum quality control compartment" evidence=IEA]
[GO:0048515 "spermatid differentiation" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
EMBL:AC073149 EMBL:AC010735 HGNC:HGNC:23081 ChiTaRS:RHBDD1
HOGENOM:HOG000272713 IPI:IPI00916015 ProteinModelPortal:C9K011
STRING:C9K011 Ensembl:ENST00000423616 ArrayExpress:C9K011
Bgee:C9K011 Uniprot:C9K011
Length = 151
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 62/157 (39%), Positives = 86/157 (54%)
Query: 9 RVSRGMLPLLALHAFNEYH-RLPWKPPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFN 66
R SRG+ L L +H + PPVT A LA N +L P L S S+ + +
Sbjct: 3 RRSRGINTGLILLLSQIFHVGINNIPPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-- 60
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
+ KD +R LSP +HA + HL++NM S+LWKGI LE +GS FA ++ A ++
Sbjct: 61 -----QQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITAFSVLT 115
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMK 163
+ LLL ++ F D E + AVGFSGVLFA+K
Sbjct: 116 GVVYLLLQFAVAEFMD-EPDFKRSCAVGFSGVLFALK 151
>UNIPROTKB|C9J1R4 [details] [associations]
symbol:RHBDD1 "Rhomboid-related protein 4" species:9606
"Homo sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0010954 "positive regulation of protein
processing" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0031293 "membrane
protein intracellular domain proteolysis" evidence=IEA] [GO:0034620
"cellular response to unfolded protein" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043687
"post-translational protein modification" evidence=IEA] [GO:0044322
"endoplasmic reticulum quality control compartment" evidence=IEA]
[GO:0048515 "spermatid differentiation" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
EMBL:AC073149 EMBL:AC010735 HGNC:HGNC:23081 ChiTaRS:RHBDD1
HOGENOM:HOG000272713 OrthoDB:EOG4894MT IPI:IPI00915745
ProteinModelPortal:C9J1R4 SMR:C9J1R4 STRING:C9J1R4
Ensembl:ENST00000424132 ArrayExpress:C9J1R4 Bgee:C9J1R4
Uniprot:C9J1R4
Length = 134
Score = 176 (67.0 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 50/136 (36%), Positives = 72/136 (52%)
Query: 9 RVSRGMLPLLALHAFNEYH-RLPWKPPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFN 66
R SRG+ L L +H + PPVT A LA N +L P L S S+ + +
Sbjct: 3 RRSRGINTGLILLLSQIFHVGINNIPPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-- 60
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
+ KD +R LSP +HA + HL++NM S+LWKGI LE +GS FA ++ A ++
Sbjct: 61 -----QQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITAFSVLT 115
Query: 127 QGITLLLAKSLVLFFD 142
+ LLL ++ F D
Sbjct: 116 GVVYLLLQFAVAEFMD 131
>UNIPROTKB|C9JQK8 [details] [associations]
symbol:RHBDD1 "Rhomboid-related protein 4" species:9606
"Homo sapiens" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0010954 "positive regulation of protein
processing" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0031293 "membrane
protein intracellular domain proteolysis" evidence=IEA] [GO:0034620
"cellular response to unfolded protein" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043687
"post-translational protein modification" evidence=IEA] [GO:0044322
"endoplasmic reticulum quality control compartment" evidence=IEA]
[GO:0048515 "spermatid differentiation" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0004252
EMBL:AC073149 EMBL:AC010735 HGNC:HGNC:23081 ChiTaRS:RHBDD1
HOGENOM:HOG000272713 IPI:IPI00916329 ProteinModelPortal:C9JQK8
SMR:C9JQK8 STRING:C9JQK8 Ensembl:ENST00000448992
ArrayExpress:C9JQK8 Bgee:C9JQK8 Uniprot:C9JQK8
Length = 124
Score = 169 (64.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 48/127 (37%), Positives = 68/127 (53%)
Query: 9 RVSRGMLPLLALHAFNEYH-RLPWKPPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFN 66
R SRG+ L L +H + PPVT A LA N +L P L S S+ + +
Sbjct: 3 RRSRGINTGLILLLSQIFHVGINNIPPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-- 60
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
+ KD +R LSP +HA + HL++NM S+LWKGI LE +GS FA ++ A ++
Sbjct: 61 -----QQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITAFSVLT 115
Query: 127 QGITLLL 133
+ LLL
Sbjct: 116 GVVYLLL 122
>DICTYBASE|DDB_G0281359 [details] [associations]
symbol:DDB_G0281359 species:44689 "Dictyostelium
discoideum" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 dictyBase:DDB_G0281359
GO:GO:0016021 EMBL:AAFI02000040 GO:GO:0004252 eggNOG:COG0705
RefSeq:XP_640745.1 ProteinModelPortal:Q54U20
EnsemblProtists:DDB0204156 GeneID:8623022 KEGG:ddi:DDB_G0281359
InParanoid:Q54U20 OMA:HINILHI Uniprot:Q54U20
Length = 343
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
+L R LS F H S H+ YNM++ L + G+ ++ ++ L G+ IT
Sbjct: 80 NLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLF-LFGI---IT---- 131
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVV-LNSRSEDYTNVHGLLVPARYAAWAELII 193
+L+ F Y + +GFSGVLFA+ + NS D + + +P++ WA LI+
Sbjct: 132 -NLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLIL 190
Query: 194 IQMFVPGVSF 203
+FVP SF
Sbjct: 191 AHVFVPRSSF 200
>SGD|S000006167 [details] [associations]
symbol:RBD2 "Possible rhomboid protease" species:4932
"Saccharomyces cerevisiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005794 "Golgi apparatus" evidence=IEA;IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM;IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030137 "COPI-coated vesicle" evidence=IDA] InterPro:IPR022764
Pfam:PF01694 SGD:S000006167 GO:GO:0016021 GO:GO:0005794
GO:GO:0000139 GO:GO:0006508 GO:GO:0004252 EMBL:BK006949 EMBL:Z67751
KO:K01362 eggNOG:COG0705 OrthoDB:EOG45XC5M EMBL:Z73602 PIR:S61018
RefSeq:NP_015078.1 ProteinModelPortal:Q12270 DIP:DIP-1734N
IntAct:Q12270 MINT:MINT-408864 STRING:Q12270 PaxDb:Q12270
EnsemblFungi:YPL246C GeneID:855830 KEGG:sce:YPL246C CYGD:YPL246c
HOGENOM:HOG000111157 OMA:PHYVSVD NextBio:980389
Genevestigator:Q12270 GermOnline:YPL246C Uniprot:Q12270
Length = 262
Score = 111 (44.1 bits), Expect = 0.00065, P = 0.00065
Identities = 43/174 (24%), Positives = 73/174 (41%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHE-VWFNPHLILKYKDLKRFFLSPFYHASESH 91
PP A L T +++L +L S + ++ E + P + K + + R L P H S H
Sbjct: 13 PP---AALTTGLVVFLTAIYLLSFIFALREDLSLAPESLFKLQ-MSRLSLYPLIHLSLPH 68
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L +N++++ W + L + + + L + GI L L+ Y A +
Sbjct: 69 LLFNVLAI-WAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLL----YPEALVAG- 122
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVH--GLLVPARYAAWAELIIIQMFVPGVSF 203
A G+ LFA S+ T + +P Y L+ I + +PG SF
Sbjct: 123 ASGWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSF 176
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.140 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 328 305 0.00098 115 3 11 22 0.45 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 620 (66 KB)
Total size of DFA: 229 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.46u 0.08s 22.54t Elapsed: 00:00:02
Total cpu time: 22.46u 0.08s 22.54t Elapsed: 00:00:02
Start: Sat May 11 12:19:31 2013 End: Sat May 11 12:19:33 2013