BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020298
(328 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224107010|ref|XP_002314342.1| predicted protein [Populus trichocarpa]
gi|222863382|gb|EEF00513.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/331 (72%), Positives = 277/331 (83%), Gaps = 6/331 (1%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
M+R G +++GMLPLLA+HA +EY+RLPWKPPVTAALL NTLIYLRPAFL ++PSI
Sbjct: 1 MDRRGS---LTKGMLPLLAIHAVSEYYRLPWKPPVTAALLGANTLIYLRPAFLRHILPSI 57
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
+VWFNPHLILKY+DLKRF LSPFYH S+SHL YNMMSLLWKGIQLETS+GS EFA+M+
Sbjct: 58 DQVWFNPHLILKYRDLKRFLLSPFYHVSDSHLVYNMMSLLWKGIQLETSVGSVEFASMLA 117
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL 180
ALL MSQGITLLLA+SL+LFFDY++ +YSEY+ GFSGVLFAMKVVLNS+SE TNV+GL+
Sbjct: 118 ALLAMSQGITLLLARSLLLFFDYDKPFYSEYSAGFSGVLFAMKVVLNSQSESLTNVYGLV 177
Query: 181 VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVL 240
+PAR+AAWAELI+IQMFVPGVSFLGHLGGILAGILY+KLK YSG DPLT IR T V+
Sbjct: 178 IPARHAAWAELILIQMFVPGVSFLGHLGGILAGILYVKLKRAYSGPDPLTLTIRTLTNVI 237
Query: 241 SWPLRFARYL--FRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR 298
SWPLRF R L FRR RI GRG+VGG T R +WRC ACT+DNS LS+CEMCGTSR
Sbjct: 238 SWPLRFVRNLFQFRRGRISGRGSVGGRQTGRAMSGLWRCQACTYDNSSLLSVCEMCGTSR 297
Query: 299 SGNDLSSDQLSRHS-NIPLEELRHRRIERFG 328
LSS + SRHS ++ LEE+R RRIERFG
Sbjct: 298 GARGLSSREFSRHSDDLTLEEIRLRRIERFG 328
>gi|225432236|ref|XP_002270713.1| PREDICTED: uncharacterized protein At3g17611 [Vitis vinifera]
gi|147864086|emb|CAN81122.1| hypothetical protein VITISV_038478 [Vitis vinifera]
gi|297736839|emb|CBI26040.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/322 (77%), Positives = 280/322 (86%), Gaps = 3/322 (0%)
Query: 9 RVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPH 68
RVSRGMLPLLALH NEY+R+ WKPPVTA LLA NTLIYLRP+F+DS++P+I +VWFNPH
Sbjct: 7 RVSRGMLPLLALHTANEYYRVGWKPPVTAGLLAANTLIYLRPSFIDSMLPTIDKVWFNPH 66
Query: 69 LILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG 128
LILK+KDLKRF LSPFYH E+HL YNMMSLLWKGIQLETSMGS EFA+MV LLGMSQG
Sbjct: 67 LILKHKDLKRFLLSPFYHMDEAHLVYNMMSLLWKGIQLETSMGSAEFASMVATLLGMSQG 126
Query: 129 ITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAW 188
ITLLLAKSL+LFFDYERAYYS++AVGFSGVLFAMKVVLNS+S DYT VHGL+VP R+AAW
Sbjct: 127 ITLLLAKSLLLFFDYERAYYSQFAVGFSGVLFAMKVVLNSQSADYTYVHGLIVPTRHAAW 186
Query: 189 AELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFAR 248
ELI+IQMFVPGVSFLGHLGGILAGILYL+LKG YSGSDPLT + +G LSWPLRFA+
Sbjct: 187 VELILIQMFVPGVSFLGHLGGILAGILYLRLKGTYSGSDPLTILFKGLADALSWPLRFAQ 246
Query: 249 YLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSD-Q 307
LFRR RI GRGTVGG TRRT+ +WRC +CT+DN G LSICEMCGT+R+GN LSS Q
Sbjct: 247 GLFRRRRISGRGTVGGRQTRRTSG-VWRCWSCTYDNPGGLSICEMCGTARNGNGLSSSLQ 305
Query: 308 LSRHSN-IPLEELRHRRIERFG 328
R S+ +PL+ELR RR+ERFG
Sbjct: 306 WPRQSHELPLDELRRRRLERFG 327
>gi|255556632|ref|XP_002519350.1| conserved hypothetical protein [Ricinus communis]
gi|223541665|gb|EEF43214.1| conserved hypothetical protein [Ricinus communis]
Length = 325
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/313 (74%), Positives = 259/313 (82%), Gaps = 11/313 (3%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
MER GG R+ RGMLPLLA+HA +EY+RLPWKPPVTA LLA NTLIYLRPAFL ++PSI
Sbjct: 1 MERSGG--RLPRGMLPLLAIHAVSEYYRLPWKPPVTAGLLAANTLIYLRPAFLRPILPSI 58
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
H+VWFNP+LILK DLKRFFLS FYH ESHL YNMMSLLWKGIQLETSMGS EFA+MV
Sbjct: 59 HDVWFNPYLILKDGDLKRFFLSAFYHVGESHLVYNMMSLLWKGIQLETSMGSVEFASMVA 118
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL 180
ALL MSQGITLLLAKSL+LFFDY R +YSEYAVGFSGVLFAMKVVLNS+S++YT+VHGL+
Sbjct: 119 ALLTMSQGITLLLAKSLLLFFDYGRPFYSEYAVGFSGVLFAMKVVLNSQSDNYTHVHGLV 178
Query: 181 VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVL 240
VPAR+AAWAELI+IQMFVPGVSFLGHLGGILAGILYLKLKG YSGSDPLT II+ T +L
Sbjct: 179 VPARHAAWAELILIQMFVPGVSFLGHLGGILAGILYLKLKGIYSGSDPLTLIIKNLTSIL 238
Query: 241 SWPLRFARYLF--RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTS- 297
SWPLR + LF R+ +I GRGTVGGS R +WRC ACT+DN S+CEMCG S
Sbjct: 239 SWPLRLVKGLFGPRQQQISGRGTVGGSQAGRAVLRVWRCQACTYDNYSSSSVCEMCGNSL 298
Query: 298 ------RSGNDLS 304
R +DLS
Sbjct: 299 PSYRLPRQFDDLS 311
>gi|356565565|ref|XP_003551010.1| PREDICTED: uncharacterized protein At3g17611-like [Glycine max]
Length = 332
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/324 (66%), Positives = 261/324 (80%), Gaps = 12/324 (3%)
Query: 7 GWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFN 66
G RVSRGMLP+LALH F+EY+R KPPVTAAL+A NTLIYLRP+FLD L+P I +VWFN
Sbjct: 17 GQRVSRGMLPILALHTFSEYYRSDHKPPVTAALIAANTLIYLRPSFLDPLIPPIEQVWFN 76
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
PHLILK KDLKRF LSPFYH E HL YNM+SLLWKG QLETSMGS F++MV +LL +S
Sbjct: 77 PHLILKNKDLKRFLLSPFYHIGEPHLVYNMLSLLWKGFQLETSMGSVNFSSMVASLLVLS 136
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYA 186
QG+TL+L+KSL+LFFDYER+YYSEY+VGFSGVLFAMKVVLNS+SE+YT+V+G++VP+RYA
Sbjct: 137 QGVTLMLSKSLLLFFDYERSYYSEYSVGFSGVLFAMKVVLNSQSENYTSVYGVIVPSRYA 196
Query: 187 AWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF 246
AWAEL++ Q+ VPGVSFLGHLGGILAG+LYLKL+ YSGS+P+ +IRG + WP +F
Sbjct: 197 AWAELVLAQLLVPGVSFLGHLGGILAGLLYLKLRSTYSGSNPIKVVIRGIVDAVKWPFKF 256
Query: 247 ARYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFD-NSGWLSICEMCGTSRSGNDLSS 305
L RR RI GRGTVG + WRC CT+D N+G L +CEMCGT+R + +SS
Sbjct: 257 ---LPRRGRITGRGTVGSNRA-------WRCQTCTYDNNNGSLRVCEMCGTNRGVSGVSS 306
Query: 306 DQ-LSRHSNIPLEELRHRRIERFG 328
Q SR +PL+ELR RRI+RFG
Sbjct: 307 FQRTSRSDGLPLDELRRRRIDRFG 330
>gi|9294149|dbj|BAB02051.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/333 (68%), Positives = 272/333 (81%), Gaps = 6/333 (1%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
ME G G R GMLPLLAL A EY+RLPWKPPVTA+LLA NTL+YLRPAF+D ++P I
Sbjct: 173 MENFGEGRRSGGGMLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHI 232
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
EVWFNPHLI K+KDLKR FLS FYH +E HL YNMMSLLWKGI+LETSMGS+EFA+MV
Sbjct: 233 SEVWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVF 292
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL 180
L+GMSQG+TLLLAKSL+L FDY+RAYY+EYAVGFSGVLFAMKVVLNS++EDY++V+G+L
Sbjct: 293 TLIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGIL 352
Query: 181 VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVL 240
VP +YAAWAELI++QMFVP SFLGHLGGILAGI+YLKLKG YSGSDP+T +RG + ++
Sbjct: 353 VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLV 412
Query: 241 SWPLRFARYLF--RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR 298
+WPLRF + RR RI GRG VG T P IWRC +CT+DNSGWLS CEMCG+ R
Sbjct: 413 TWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGSGR 472
Query: 299 S-GNDLSSDQ---LSRHSNIPLEELRHRRIERF 327
+ GN S +Q LS +++PL+ELR RR+ERF
Sbjct: 473 ARGNGWSLNQGPALSSSNDLPLDELRRRRVERF 505
>gi|30684602|ref|NP_850606.1| rhomboid-like protein 14 [Arabidopsis thaliana]
gi|75247670|sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611
gi|19310562|gb|AAL85014.1| unknown protein [Arabidopsis thaliana]
gi|21436261|gb|AAM51269.1| unknown protein [Arabidopsis thaliana]
gi|332642458|gb|AEE75979.1| rhomboid-like protein 14 [Arabidopsis thaliana]
Length = 334
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/333 (68%), Positives = 272/333 (81%), Gaps = 6/333 (1%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
ME G G R GMLPLLAL A EY+RLPWKPPVTA+LLA NTL+YLRPAF+D ++P I
Sbjct: 1 MENFGEGRRSGGGMLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHI 60
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
EVWFNPHLI K+KDLKR FLS FYH +E HL YNMMSLLWKGI+LETSMGS+EFA+MV
Sbjct: 61 SEVWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVF 120
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL 180
L+GMSQG+TLLLAKSL+L FDY+RAYY+EYAVGFSGVLFAMKVVLNS++EDY++V+G+L
Sbjct: 121 TLIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGIL 180
Query: 181 VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVL 240
VP +YAAWAELI++QMFVP SFLGHLGGILAGI+YLKLKG YSGSDP+T +RG + ++
Sbjct: 181 VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLV 240
Query: 241 SWPLRFARYLF--RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR 298
+WPLRF + RR RI GRG VG T P IWRC +CT+DNSGWLS CEMCG+ R
Sbjct: 241 TWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGSGR 300
Query: 299 S-GNDLSSDQ---LSRHSNIPLEELRHRRIERF 327
+ GN S +Q LS +++PL+ELR RR+ERF
Sbjct: 301 ARGNGWSLNQGPALSSSNDLPLDELRRRRVERF 333
>gi|297830378|ref|XP_002883071.1| hypothetical protein ARALYDRAFT_898103 [Arabidopsis lyrata subsp.
lyrata]
gi|297328911|gb|EFH59330.1| hypothetical protein ARALYDRAFT_898103 [Arabidopsis lyrata subsp.
lyrata]
Length = 335
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/320 (68%), Positives = 266/320 (83%), Gaps = 6/320 (1%)
Query: 14 MLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY 73
MLPLLAL A EY+RLPWKPPVTA+LLA NTL+YLRPAF+D ++P I EVWFNPHLI K+
Sbjct: 15 MLPLLALSAVAEYYRLPWKPPVTASLLAANTLLYLRPAFIDPVIPHISEVWFNPHLIFKH 74
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
KDLKR FLS FYH +E HL YNMMSLLWKGI+LETSMGS+EFA+MV L+GMSQG+TLLL
Sbjct: 75 KDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLL 134
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
AKSL++ FDY+RAYY+EYAVGFSGVLFA+KVVLNS++EDY++V+G+LVP +YAAWAELI+
Sbjct: 135 AKSLLVLFDYDRAYYNEYAVGFSGVLFALKVVLNSQAEDYSSVYGILVPTKYAAWAELIL 194
Query: 194 IQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLF-- 251
+QMFVP SFLGHLGGILAGI+Y+KLKG YSGSDP+T +RG T +++WPLRF +
Sbjct: 195 VQMFVPNASFLGHLGGILAGIIYMKLKGSYSGSDPVTMAVRGVTRLVTWPLRFLNGMVRS 254
Query: 252 RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS-GNDLSSDQ--- 307
RR RI GRG VG T P IWRC +CT+DNSGWLS CEMCG+ R+ G+ S +Q
Sbjct: 255 RRRRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGSGRARGDGWSLNQGPA 314
Query: 308 LSRHSNIPLEELRHRRIERF 327
LS +++PL+ELR RR+ERF
Sbjct: 315 LSSSNDLPLDELRRRRVERF 334
>gi|358248954|ref|NP_001240224.1| uncharacterized protein LOC100816495 [Glycine max]
gi|255640981|gb|ACU20770.1| unknown [Glycine max]
Length = 322
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/324 (64%), Positives = 254/324 (78%), Gaps = 11/324 (3%)
Query: 7 GWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFN 66
G RVSRGMLPLLALH +EY+R KPP TAAL+A NTLIYLRP+FLD L+P I +VWFN
Sbjct: 6 GQRVSRGMLPLLALHTVSEYYRSDHKPPFTAALIAANTLIYLRPSFLDPLIPPIEQVWFN 65
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
PHLILK KDLKRF LSPFYH E HL YNM+SLLWKG QLETSMGS +FA++V +LL +S
Sbjct: 66 PHLILKNKDLKRFLLSPFYHIGEPHLVYNMLSLLWKGFQLETSMGSVDFASIVASLLVLS 125
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYA 186
QG+TL+L+KSL+LFFDYER+YYSEY+VGFSGVLFAMKVVLNS+SE+YT+V+G++VP+RYA
Sbjct: 126 QGVTLMLSKSLLLFFDYERSYYSEYSVGFSGVLFAMKVVLNSQSENYTSVYGIIVPSRYA 185
Query: 187 AWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF 246
AWAEL++ Q+ VPGVSFLGHLGGILAG+LYLKL+ YSGS+P+ +IRG + WP +F
Sbjct: 186 AWAELVLAQLLVPGVSFLGHLGGILAGLLYLKLRSTYSGSNPIKVLIRGIVDAVKWPFKF 245
Query: 247 ARYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFD-NSGWLSICEMCGTSRSGNDLSS 305
L RR GS+ WRC CT+D N+G L +CEMCGT R N +SS
Sbjct: 246 ---LRRRRGRITGRGTVGSNR------AWRCQTCTYDNNNGSLRVCEMCGTIRVVNGVSS 296
Query: 306 DQLSRHSN-IPLEELRHRRIERFG 328
Q S S+ +PL+ELR RRI+RFG
Sbjct: 297 FQRSSRSDGLPLDELRRRRIDRFG 320
>gi|388508086|gb|AFK42109.1| unknown [Medicago truncatula]
Length = 335
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/311 (64%), Positives = 248/311 (79%), Gaps = 8/311 (2%)
Query: 7 GWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFN 66
G +SRGMLPLLALH F EY+R KPPVTAAL+A NT+IYLRP+FL L+P I EV FN
Sbjct: 6 GRGISRGMLPLLALHTFTEYYRSNTKPPVTAALIAANTVIYLRPSFLRHLIPPIDEVLFN 65
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
HLILK KDLKRFFLS FYH E HL +NM+SLLWKGI LE+S+GS +FA+M+ +LL +S
Sbjct: 66 SHLILKNKDLKRFFLSAFYHLGEPHLVFNMISLLWKGIHLESSIGSLQFASMIASLLALS 125
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYA 186
Q I L+L+KSL +FFDY+R YY EYA GFSGVLFAMK+VLNS+S+DYTNV+G+L+P+RYA
Sbjct: 126 QSINLVLSKSLFVFFDYDRYYY-EYAAGFSGVLFAMKIVLNSQSDDYTNVYGVLIPSRYA 184
Query: 187 AWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF 246
AWAELI+IQMFVP VSFLGHL GILAG++YL+ + +SGS+PL +I+RG VL+WP++F
Sbjct: 185 AWAELILIQMFVPNVSFLGHLSGILAGLVYLRFRRNFSGSNPLNSIVRGFNSVLNWPVKF 244
Query: 247 ARYL--FRRPRIYGRGTVGGSDTRRTAPII---WRCPACTFDNSGWLSICEMCGTSRSGN 301
R L FRR RI GRGTVG T R A + WRC ACT+DNSG +++CEMCGTSR G
Sbjct: 245 FRDLFGFRRERITGRGTVG--RTGRNAAQVAADWRCQACTYDNSGLMNVCEMCGTSRVGG 302
Query: 302 DLSSDQLSRHS 312
SSD+++R
Sbjct: 303 GGSSDEMNRRD 313
>gi|449457305|ref|XP_004146389.1| PREDICTED: uncharacterized protein At3g17611-like [Cucumis sativus]
Length = 314
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 194/303 (64%), Positives = 226/303 (74%), Gaps = 5/303 (1%)
Query: 14 MLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY 73
MLPLLA ++Y+RL P +T LLA+NTLI+LRP FL ++PSI EVWFN HLI K+
Sbjct: 1 MLPLLAYQVVSQYYRLQGNP-ITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLIFKH 59
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
KDLKRF LSPFYH + HL YNM+SLLWKG QLETSMGS EFA+MV ALL MSQGITLLL
Sbjct: 60 KDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASMVGALLIMSQGITLLL 119
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
KSL++FF+Y R YY EY+VGFSGVLFAMKVVL S ++ YT VHGL VP+ +AAW ELI+
Sbjct: 120 IKSLLIFFNYGRPYYYEYSVGFSGVLFAMKVVLGSETDSYTYVHGLRVPSSHAAWLELIL 179
Query: 194 IQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYL--F 251
IQM PGVSFLGHLGGILAG+L+L+LKG SGSDPLT +IR +LS F L F
Sbjct: 180 IQMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPLTLLIRSVGRILSRSYGFFCRLNPF 239
Query: 252 RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRH 311
R+ RI+G GTVG T+ WRC ACTFDNSG LS CEMCGT R L S+QLS
Sbjct: 240 RQRRIFGGGTVGSRPV--TSIGTWRCQACTFDNSGLLSACEMCGTDRQDGVLHSNQLSSQ 297
Query: 312 SNI 314
++
Sbjct: 298 LDL 300
>gi|449480819|ref|XP_004156004.1| PREDICTED: uncharacterized protein At3g17611-like [Cucumis sativus]
Length = 314
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 194/303 (64%), Positives = 226/303 (74%), Gaps = 5/303 (1%)
Query: 14 MLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY 73
MLPLLA ++Y+RL P +T LLA+NTLI+LRP FL ++PSI EVWFN HLI K+
Sbjct: 1 MLPLLAYQVVSQYYRLQGNP-ITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLIFKH 59
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
KDLKRF LSPFYH + HL YNM+SLLWKG QLETSMGS EFA+MV ALL MSQGITLLL
Sbjct: 60 KDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASMVGALLIMSQGITLLL 119
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
KSL++FF+Y R YY EY+VGFSGVLFAMKVVL S ++ YT VHGL VP+ +AAW ELI+
Sbjct: 120 IKSLLIFFNYGRPYYYEYSVGFSGVLFAMKVVLGSETDSYTYVHGLRVPSSHAAWLELIL 179
Query: 194 IQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYL--F 251
IQM PGVSFLGHLGGILAG+L+L+LKG SGSDPLT +IR +LS F L F
Sbjct: 180 IQMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPLTLLIRSVGRILSRSYGFFCRLNPF 239
Query: 252 RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRH 311
R+ RI+G GTVG T+ WRC ACTFDNSG LS CEMCGT R L S+QLS
Sbjct: 240 RQRRIFGGGTVGSRPV--TSIGTWRCQACTFDNSGLLSECEMCGTDRQDGVLHSNQLSSQ 297
Query: 312 SNI 314
++
Sbjct: 298 LDL 300
>gi|242094106|ref|XP_002437543.1| hypothetical protein SORBIDRAFT_10g029120 [Sorghum bicolor]
gi|241915766|gb|EER88910.1| hypothetical protein SORBIDRAFT_10g029120 [Sorghum bicolor]
Length = 344
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/312 (59%), Positives = 230/312 (73%), Gaps = 7/312 (2%)
Query: 2 ERGGGGWRVSRGMLPLLALHAFNEYHRL-PWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
R G G SRGMLPLLAL EY R +PPVTAALLA N+LIYLRP LD ++PS+
Sbjct: 9 RRRGSGLEASRGMLPLLALQVLIEYGRAGASRPPVTAALLAANSLIYLRPGALDGVLPSL 68
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
V FNP LI++Y DL RFFLSPFYH SESHLFYNM SLLWKGIQLETSMGS EFA+M
Sbjct: 69 SRVSFNPQLIVEYGDLVRFFLSPFYHLSESHLFYNMTSLLWKGIQLETSMGSTEFASMSA 128
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL 180
LLG+SQGITLLL++ L+L D + AYY ++AVGFSG+LFAMKVVLN+ S+D+ +HG++
Sbjct: 129 VLLGLSQGITLLLSRGLLLLGD-DTAYYDQHAVGFSGILFAMKVVLNAWSDDFVYLHGMI 187
Query: 181 VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVL 240
+P++YAAWAELI+IQ+F+PG SFLG LGGILAG++YL LK ++G DP+T +I V+
Sbjct: 188 LPSKYAAWAELILIQVFIPGTSFLGQLGGILAGLVYLWLKRAFNGPDPITLLISSIANVV 247
Query: 241 SWPLRFARYLFR----RPRIYGRGTVGGSDTRRTAPI-IWRCPACTFDNSGWLSICEMCG 295
+WP+RFA+ L R + R GRG VG + R +P WRCP CT+DNS ICEMC
Sbjct: 248 TWPVRFAQNLLRSARSQGRATGRGRVGRRISARDSPRGFWRCPTCTYDNSVSTDICEMCS 307
Query: 296 TSRSGNDLSSDQ 307
T+R + S Q
Sbjct: 308 TAREDHAFSRRQ 319
>gi|413934803|gb|AFW69354.1| hypothetical protein ZEAMMB73_186009 [Zea mays]
Length = 345
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 234/323 (72%), Gaps = 11/323 (3%)
Query: 7 GWRVSRGMLPLLALHAFNEYHRL-PWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWF 65
G SRGMLPLLAL EY R +PPVTAALLA N+L+YLRP LD ++PS+ V F
Sbjct: 14 GLEASRGMLPLLALQVLIEYGRAGASRPPVTAALLAANSLVYLRPGALDGVLPSLARVSF 73
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
NP LI++Y DL RFFLSPFYH SESHLFYNM SLLWKGI LETSMGS EFA+MV LLG+
Sbjct: 74 NPQLIIEYGDLTRFFLSPFYHLSESHLFYNMTSLLWKGIHLETSMGSAEFASMVAVLLGL 133
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
SQGITLLL++ L+L D + YY ++AVGFSGVLFAMKVVLN+ S+D+ +HG+++PA+Y
Sbjct: 134 SQGITLLLSRGLLLLGD-DTMYYDQHAVGFSGVLFAMKVVLNAWSDDFVYLHGMVIPAKY 192
Query: 186 AAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLR 245
AAWAELI+IQ+F+PG SFLGHLGGILAG++YL LK +G DP+T +I V++WP+R
Sbjct: 193 AAWAELILIQVFIPGTSFLGHLGGILAGLVYLWLKRASNGPDPITLLISSVANVVTWPVR 252
Query: 246 FARYLFR----RPRIYGRGTVGGSDTRRTAPI-IWRCPACTFDNSGWLSICEMCGTSRSG 300
FA+ L R + R+ GRG VG + R +P WRCP CT+DNS ICEMC T+R
Sbjct: 253 FAQNLLRSARSQGRVTGRGRVGRRISARDSPRGFWRCPTCTYDNSVSTDICEMCSTARDN 312
Query: 301 NDLSSDQ----LSRHSNIPLEEL 319
+ Q + +P++E+
Sbjct: 313 HAFLRRQHHQAVGNTVELPVDEM 335
>gi|226528725|ref|NP_001140801.1| uncharacterized protein LOC100272876 [Zea mays]
gi|194701136|gb|ACF84652.1| unknown [Zea mays]
gi|195636066|gb|ACG37501.1| rhomboid domain containing 1 [Zea mays]
gi|413946850|gb|AFW79499.1| Rhomboid domain containing 1 [Zea mays]
Length = 344
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 184/303 (60%), Positives = 219/303 (72%), Gaps = 7/303 (2%)
Query: 11 SRGMLPLLALHAFNEYHRL-PWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHL 69
S GMLPLLAL EY R +PPVTAALLA N LIYLRP LD ++PS+ V FNP L
Sbjct: 18 SGGMLPLLALQVLIEYGRAGASRPPVTAALLAGNALIYLRPGALDGILPSVTRVSFNPRL 77
Query: 70 ILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGI 129
I++ DL RFFLSPFYH SESHLFYNM SLLWKGIQLETSMGS EFA+MV ALLG+SQGI
Sbjct: 78 IVENGDLVRFFLSPFYHLSESHLFYNMTSLLWKGIQLETSMGSVEFASMVAALLGLSQGI 137
Query: 130 TLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWA 189
LLL+K L+L DY AYY +YAVGFSGVLFAMKVVLN+ SED+ +HG+++PA+YAAWA
Sbjct: 138 ALLLSKGLLLLGDYT-AYYDQYAVGFSGVLFAMKVVLNAWSEDFVYLHGMVIPAKYAAWA 196
Query: 190 ELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARY 249
ELI+IQ+F+PG SFLGHL GILAG++YL LK +G DPLT ++ T V++WP+RFA+
Sbjct: 197 ELILIQVFIPGTSFLGHLSGILAGLVYLWLKRALNGPDPLTLLVSSITKVVTWPVRFAQN 256
Query: 250 LF-----RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLS 304
L + R T +WRCPACT+DNS ICEMC T+R +D S
Sbjct: 257 LLWSAHPQGRFRGRGRVGRRQSARDTPRGLWRCPACTYDNSVSTDICEMCSTAREDHDFS 316
Query: 305 SDQ 307
Q
Sbjct: 317 LRQ 319
>gi|242057071|ref|XP_002457681.1| hypothetical protein SORBIDRAFT_03g011570 [Sorghum bicolor]
gi|241929656|gb|EES02801.1| hypothetical protein SORBIDRAFT_03g011570 [Sorghum bicolor]
Length = 344
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/307 (61%), Positives = 227/307 (73%), Gaps = 7/307 (2%)
Query: 7 GWRVSRGMLPLLALHAFNEYHRL-PWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWF 65
G S GMLPLLAL EY R +PPVTAALLA N LIYLRP LD ++PS+ V F
Sbjct: 14 GAGASGGMLPLLALQVLIEYGRAGASRPPVTAALLAANALIYLRPGALDGILPSLTRVSF 73
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
NP LI++Y DL RFFLSPFYH SESHLFYNM SLLWKGIQLETSMGS EFA+MV ALLG+
Sbjct: 74 NPWLIIEYGDLVRFFLSPFYHLSESHLFYNMTSLLWKGIQLETSMGSVEFASMVAALLGL 133
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
SQGITLLL+K L+L DY AYY++YAVGFSGVLFAMKVVLN+ SED+ +HG+++PA+Y
Sbjct: 134 SQGITLLLSKGLLLLGDYT-AYYNQYAVGFSGVLFAMKVVLNAWSEDFVYLHGMVIPAKY 192
Query: 186 AAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLR 245
AAWAELI+IQ+F+PG SFLGHL GILAG++YL LK +G DP+T ++ V++WP+R
Sbjct: 193 AAWAELILIQVFIPGTSFLGHLSGILAGLVYLWLKRALNGPDPVTLLMSSIAKVVTWPVR 252
Query: 246 FARYLF----RRPRIYGRGTVGGSDTRRTAP-IIWRCPACTFDNSGWLSICEMCGTSRSG 300
FA+ L + R GRG VG + R AP +WRC CT+DNS ICEMC T+R
Sbjct: 253 FAQNLLWSAHSQGRFTGRGRVGRRQSARDAPRRLWRCSTCTYDNSASTDICEMCNTARED 312
Query: 301 NDLSSDQ 307
N S Q
Sbjct: 313 NAFSQRQ 319
>gi|255645151|gb|ACU23074.1| unknown [Glycine max]
Length = 234
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 160/214 (74%), Positives = 190/214 (88%)
Query: 7 GWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFN 66
G RVSRGMLPLLALH +EY+R KPP TAAL+ NTLIYLRP+FLD L+P I +VWFN
Sbjct: 6 GQRVSRGMLPLLALHTVSEYYRSDHKPPFTAALITANTLIYLRPSFLDPLIPPIEQVWFN 65
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
PHLILK KDLKRF LSPFYH E HL YNM+SLLWKG QLETSMGS +FA++V +LL +S
Sbjct: 66 PHLILKNKDLKRFLLSPFYHIGEPHLVYNMLSLLWKGFQLETSMGSVDFASIVASLLVLS 125
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYA 186
QG+TL+L+KSL+LFFDYER+YYSEY+VGFSGVLFAMKVVLNS+SE+YT+V+G++VP+RYA
Sbjct: 126 QGVTLMLSKSLLLFFDYERSYYSEYSVGFSGVLFAMKVVLNSQSENYTSVYGIIVPSRYA 185
Query: 187 AWAELIIIQMFVPGVSFLGHLGGILAGILYLKLK 220
AWAEL++ Q+ VPGVSFLGHLGGILAG+LYLKL+
Sbjct: 186 AWAELVLAQLLVPGVSFLGHLGGILAGLLYLKLR 219
>gi|326489153|dbj|BAK01560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 228/324 (70%), Gaps = 9/324 (2%)
Query: 3 RGGG-GWRV--SRGMLPLLALHAFNEYHRL-PWKPPVTAALLATNTLIYLRPAFLDSLVP 58
RG G GW S GMLPLLAL EY R +PPVTAAL+A N L+YLRP LD+ +P
Sbjct: 11 RGTGVGWGSGPSSGMLPLLALQVILEYGRAGASRPPVTAALIAANALVYLRPGALDAFLP 70
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
+ V FNPHLI++Y DL RFFLS FYH SE+H FYNM SLLWKGIQLETSMGS EFA+M
Sbjct: 71 PLSRVAFNPHLIIQYGDLTRFFLSAFYHLSETHFFYNMTSLLWKGIQLETSMGSVEFASM 130
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHG 178
V ALLG+SQG TLLL+K L+L + E YY +YAVGFSGVLF MK+VLN+ S+DY +HG
Sbjct: 131 VTALLGLSQGFTLLLSKGLLLLGN-EVPYYDQYAVGFSGVLFGMKIVLNAWSDDYVFLHG 189
Query: 179 LLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATG 238
+++PA+YAAWAEL++IQ F+PG SF+GHL GILAG+ YL +K YSG DPL +I G T
Sbjct: 190 MVIPAKYAAWAELLLIQAFIPGTSFIGHLSGILAGLAYLWVKRSYSGPDPLALLISGITN 249
Query: 239 VLSWPLRFARYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR 298
V+SWP++FA+ L R G VG R + +WRC ACT+DNS +ICEMC + R
Sbjct: 250 VVSWPVKFAQRLLRP-GRRQGGRVGRRPARESGRGLWRCSACTYDNSPSANICEMCNSER 308
Query: 299 SGNDLSSDQLSR---HSNIPLEEL 319
Q + +S++ ++E+
Sbjct: 309 EDRVFPQRQHVQDGGNSDLSVDEI 332
>gi|357131656|ref|XP_003567452.1| PREDICTED: uncharacterized protein At3g17611-like [Brachypodium
distachyon]
Length = 345
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/267 (60%), Positives = 203/267 (76%), Gaps = 1/267 (0%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
+PPVTAAL+A N L+YLRP LD+++P + V FNP+LI++Y DL RFFLS FYH SE+H
Sbjct: 44 RPPVTAALIAANALVYLRPGALDAVLPPLSRVAFNPYLIIQYGDLTRFFLSAFYHLSETH 103
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
FYNM SLLWKGIQLETS+GS EFA+MV ALL +SQGITLLL+K L+LF + E AYY +Y
Sbjct: 104 FFYNMTSLLWKGIQLETSVGSVEFASMVAALLALSQGITLLLSKGLLLFGN-ETAYYDQY 162
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
AVGFSGVLF MK+VLN+ S+DY +HG+++PA+YAAWAEL++IQ F+PG SF+GHLGGIL
Sbjct: 163 AVGFSGVLFGMKIVLNAWSDDYVFLHGMVIPAKYAAWAELLLIQAFIPGTSFIGHLGGIL 222
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGTVGGSDTRRTA 271
AG+ YL LK YSG DPL +I G T V+SWP++FA+ L R G + +R +
Sbjct: 223 AGLTYLWLKRSYSGPDPLALLISGITSVVSWPVKFAQGLLRPGHRRGSRVGRRASSRESG 282
Query: 272 PIIWRCPACTFDNSGWLSICEMCGTSR 298
+WRC ACT+DN ICEMC T R
Sbjct: 283 RGMWRCSACTYDNLRSADICEMCSTER 309
>gi|218187998|gb|EEC70425.1| hypothetical protein OsI_01431 [Oryza sativa Indica Group]
Length = 348
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/280 (61%), Positives = 210/280 (75%), Gaps = 5/280 (1%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
+PPVTAALLA N L+YLRP LD+L+PS++ V FNPHLI+ Y DL RFFLS FYH SE+H
Sbjct: 45 RPPVTAALLAANALLYLRPGSLDALLPSLNRVAFNPHLIIHYCDLTRFFLSAFYHLSETH 104
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
F+NM SLLWKGIQLETSMGS EFA+MV ALLGMSQGITLLL+K L+LF + E AYY +Y
Sbjct: 105 FFFNMSSLLWKGIQLETSMGSVEFASMVAALLGMSQGITLLLSKGLLLFGNDE-AYYDQY 163
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
AVGFSGVLF MKVVLN+ S+DY +HG+++PA+YAAWAEL++IQ F+PG S +GHLGGIL
Sbjct: 164 AVGFSGVLFGMKVVLNAWSDDYVFLHGVVIPAKYAAWAELLLIQAFIPGTSLIGHLGGIL 223
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFR--RPRIY--GRGTVGGSDT 267
AG+ YL LK +SG DPL+ +I G + WP+ F + LFR RP+ Y RG VG
Sbjct: 224 AGLAYLWLKRSFSGPDPLSLLISGIGKAVRWPVGFVQKLFRSGRPQGYTPSRGRVGRGSA 283
Query: 268 RRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQ 307
R IWRC ACT+DNS ICEMC ++R + S Q
Sbjct: 284 RENGRGIWRCSACTYDNSPSTDICEMCSSAREDHAFSRRQ 323
>gi|115436016|ref|NP_001042766.1| Os01g0283500 [Oryza sativa Japonica Group]
gi|13486724|dbj|BAB39959.1| OSJNBa0004B13.13 [Oryza sativa Japonica Group]
gi|13486740|dbj|BAB39974.1| unknown protein [Oryza sativa Japonica Group]
gi|15408827|dbj|BAB64219.1| unknown protein [Oryza sativa Japonica Group]
gi|113532297|dbj|BAF04680.1| Os01g0283500 [Oryza sativa Japonica Group]
gi|222618217|gb|EEE54349.1| hypothetical protein OsJ_01336 [Oryza sativa Japonica Group]
Length = 350
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/280 (61%), Positives = 210/280 (75%), Gaps = 5/280 (1%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
+PPVTAALLA N L+YLRP LD+L+PS++ V FNPHLI+ Y DL RFFLS FYH SE+H
Sbjct: 47 RPPVTAALLAANALLYLRPGSLDALLPSLNRVAFNPHLIIHYCDLTRFFLSAFYHLSETH 106
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
F+NM SLLWKGIQLETSMGS EFA+MV ALLGMSQGITLLL+K L+LF + E AYY +Y
Sbjct: 107 FFFNMSSLLWKGIQLETSMGSVEFASMVAALLGMSQGITLLLSKGLLLFGNDE-AYYDQY 165
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
AVGFSGVLF MKVVLN+ S+DY +HG+++PA+YAAWAEL++IQ F+PG S +GHLGGIL
Sbjct: 166 AVGFSGVLFGMKVVLNAWSDDYVFLHGVVIPAKYAAWAELLLIQAFIPGTSLIGHLGGIL 225
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFR--RPRIY--GRGTVGGSDT 267
AG+ YL LK +SG DPL+ +I G + WP+ F + LFR RP+ Y RG VG
Sbjct: 226 AGLAYLWLKRSFSGPDPLSLLISGIGKAVRWPVGFVQKLFRSGRPQGYTPSRGRVGRGSA 285
Query: 268 RRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQ 307
R IWRC ACT+DNS ICEMC ++R + S Q
Sbjct: 286 RENGRGIWRCSACTYDNSPSTDICEMCSSAREDHAFSHRQ 325
>gi|168027437|ref|XP_001766236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682450|gb|EDQ68868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 216/329 (65%), Gaps = 16/329 (4%)
Query: 14 MLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY 73
ML ++A+HA + P KP VTAAL+A TLI+LRP LD+++P++ EV NP+ ++K
Sbjct: 1 MLYMMAMHAATNLLQQPRKPVVTAALIAAQTLIHLRPGKLDAILPTLSEVCLNPYFVVKN 60
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
+DLKR +LS YH E+HL YNM+SL WKGIQLE SMGS +AAMV LLG+S + +
Sbjct: 61 RDLKRLWLSALYHVDETHLVYNMISLTWKGIQLENSMGSQNYAAMVAVLLGLSSSLVVAS 120
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+ L D ++YSE +VGFSGVLFA+KVVLN S +TNV+G+LVP+RYAAW EL++
Sbjct: 121 SSFLAFIADSPTSFYSECSVGFSGVLFALKVVLNYNSPTHTNVYGILVPSRYAAWVELLV 180
Query: 194 IQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFR- 252
IQMFVPG SFLGHL GILAG++Y+ G SG+ + ++ G LSWP+R R
Sbjct: 181 IQMFVPGTSFLGHLCGILAGLIYVNTPGVVSGTLSMWGVLPMMLGALSWPVRQLGRFVRG 240
Query: 253 -RPRIYGRGTVGGSDTRRTA--PI------IWRCPACTFDNSGWLSICEMCGTSRSGNDL 303
R +GRGTVG S R A P+ +WRC ACT+DNS + C+MCGT R G D+
Sbjct: 241 SSGRTFGRGTVGSSRATRPASSPLRDREGSVWRCEACTYDNSTVVDTCDMCGT-RRGRDV 299
Query: 304 SS---DQLSRHSNIPL--EELRHRRIERF 327
S D SN P+ EELR R+ RF
Sbjct: 300 RSEAGDARRGTSNSPMSREELRQARLSRF 328
>gi|42572467|ref|NP_974329.1| rhomboid-like protein 14 [Arabidopsis thaliana]
gi|332642457|gb|AEE75978.1| rhomboid-like protein 14 [Arabidopsis thaliana]
Length = 239
Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 162/238 (68%), Positives = 197/238 (82%), Gaps = 6/238 (2%)
Query: 96 MMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGF 155
MMSLLWKGI+LETSMGS+EFA+MV L+GMSQG+TLLLAKSL+L FDY+RAYY+EYAVGF
Sbjct: 1 MMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGF 60
Query: 156 SGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
SGVLFAMKVVLNS++EDY++V+G+LVP +YAAWAELI++QMFVP SFLGHLGGILAGI+
Sbjct: 61 SGVLFAMKVVLNSQAEDYSSVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGII 120
Query: 216 YLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLF--RRPRIYGRGTVGGSDTRRTAPI 273
YLKLKG YSGSDP+T +RG + +++WPLRF + RR RI GRG VG T P
Sbjct: 121 YLKLKGSYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPG 180
Query: 274 IWRCPACTFDNSGWLSICEMCGTSRS-GNDLSSDQ---LSRHSNIPLEELRHRRIERF 327
IWRC +CT+DNSGWLS CEMCG+ R+ GN S +Q LS +++PL+ELR RR+ERF
Sbjct: 181 IWRCQSCTYDNSGWLSACEMCGSGRARGNGWSLNQGPALSSSNDLPLDELRRRRVERF 238
>gi|168008302|ref|XP_001756846.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692084|gb|EDQ78443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 354
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 216/342 (63%), Gaps = 26/342 (7%)
Query: 13 GMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILK 72
GML +LA+HA + + +LP KPPVTAAL+A TLI+LRP LD +P++ EV NP+ ++K
Sbjct: 12 GMLYMLAMHAASTFMQLPRKPPVTAALIAVQTLIHLRPGKLDDALPTLSEVCLNPYFVIK 71
Query: 73 YKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLL 132
DLKR FLS FYH E+HL YNM+SL+WKG+QLE SMGS +FA ++ LLG+S + +
Sbjct: 72 DWDLKRLFLSAFYHVDETHLVYNMISLMWKGVQLEGSMGSQKFAGLLAVLLGLSSSLVVA 131
Query: 133 LAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
+ L D ++YSE AVGFSGVLFA+KVVLN S +TNV+G+LVP+RYAAW EL+
Sbjct: 132 SSSLLAFLADSPTSFYSECAVGFSGVLFALKVVLNYNSPSHTNVYGILVPSRYAAWVELL 191
Query: 193 IIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLF- 251
+IQMFVPG SFLGHL GILAG++Y+ SG + I+ G LSWP+R +L
Sbjct: 192 VIQMFVPGTSFLGHLCGILAGVIYMNTPEVVSGGFSMWGIVPSIFGALSWPIRRLHWLLW 251
Query: 252 -RRPRIYGRGTVG--------GSDTR---RTAPIIWRCPACTFDNSGWLSICEMCGTSRS 299
R +GRGTVG S R R ++WRC ACTFDN + C MCGT R
Sbjct: 252 GSSGRTFGRGTVGFRRDTSAPSSSLRNRDRNEALVWRCQACTFDNRTAVGACAMCGTHRV 311
Query: 300 G------NDLS-------SDQLSRHSNIPLEELRHRRIERFG 328
G +DL+ + + S + EELR R+ RF
Sbjct: 312 GEASPEFDDLAPSAPLMPTRRDRSLSPMSREELRQARLSRFN 353
>gi|326508430|dbj|BAJ99482.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/228 (60%), Positives = 170/228 (74%), Gaps = 2/228 (0%)
Query: 72 KYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITL 131
KY DL RFFLS FYH SE+H FYNM SLLWKGIQLETSMGS EFA+MV ALLG+SQG TL
Sbjct: 11 KYGDLTRFFLSAFYHLSETHFFYNMTSLLWKGIQLETSMGSVEFASMVTALLGLSQGFTL 70
Query: 132 LLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
LL+K L+L + E YY +YAVGFSGVLF MK+VLN+ S+DY +HG+++PA+YAAWAEL
Sbjct: 71 LLSKGLLLLGN-EVPYYDQYAVGFSGVLFGMKIVLNAWSDDYVFLHGMVIPAKYAAWAEL 129
Query: 192 IIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLF 251
++IQ F+PG SF+GHL GILAG+ YL +K YSG DPL +I G T V+SWP++ A+ L
Sbjct: 130 LLIQAFIPGTSFIGHLSGILAGLAYLWVKRSYSGPDPLALLISGITNVVSWPVKLAQRLL 189
Query: 252 RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS 299
R R G VG R + +WRC ACT+DNS +ICEMC + R
Sbjct: 190 RPGRRQ-GGRVGRRPARESGRGLWRCSACTYDNSPSANICEMCNSERE 236
>gi|326524840|dbj|BAK04356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/291 (48%), Positives = 184/291 (63%), Gaps = 19/291 (6%)
Query: 15 LPLLALHAFNEYHRL-PWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY 73
LPLLA+ +Y +PPVTAAL+A N L+YLRP +D+ +P + V FNPHLI+K+
Sbjct: 17 LPLLAVRMLLQYGPTGASRPPVTAALIAANALVYLRPGAVDAHLPRLRHVMFNPHLIIKF 76
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
DL+RFFLS FYH SE H F NM SLL G++LETSMGS EFA+MVV+LLG+SQG TLLL
Sbjct: 77 SDLRRFFLSAFYHLSEGHFFMNMASLLHTGVKLETSMGSPEFASMVVSLLGLSQGFTLLL 136
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+K L+L + + AYY +Y+ GFSGVL M VVLN+R E G+ VP++YAA EL++
Sbjct: 137 SKGLLLLGN-DMAYY-QYSAGFSGVLLGMNVVLNAR-EGNVVWQGVSVPSKYAALLELLV 193
Query: 194 IQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRR 253
I F P + ++GGILAG+ YL L+ G + L + G V S P+RFA+ L R
Sbjct: 194 IHAFNPEAHLVCNVGGILAGLAYLLLR---HGPERLAHMFSGIADVASQPVRFAKRLLRS 250
Query: 254 PRIYGRGTVGGSDTRRTAPII--------WRCPACTFDNSGWLSICEMCGT 296
G TV R AP+ WRC C++DNS +CEMC T
Sbjct: 251 AAHGGGSTV----RRHVAPVPKEVGRGMWWRCITCSYDNSRHADVCEMCST 297
>gi|18419592|gb|AAL69367.1|AF462204_1 unknown [Narcissus pseudonarcissus]
Length = 161
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/161 (70%), Positives = 137/161 (85%), Gaps = 1/161 (0%)
Query: 27 HRL-PWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
HRL +PPVTA L+ TN LIYLRP LD ++P++ E+ FNPHLILK+ DL+R FLS FY
Sbjct: 1 HRLGRRRPPVTAGLILTNALIYLRPGALDRILPTVDEICFNPHLILKHGDLRRLFLSAFY 60
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
H ESHL YNMMSLLWKGIQLET MGS EFA+MV ALLG+SQG+TLLLAKSL++FFDY
Sbjct: 61 HMGESHLVYNMMSLLWKGIQLETFMGSLEFASMVAALLGLSQGMTLLLAKSLLVFFDYGT 120
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYA 186
YY++Y+VGFSGVLFAMKVVLNS+++DYT VHG++VP+R+A
Sbjct: 121 PYYNQYSVGFSGVLFAMKVVLNSQADDYTYVHGMMVPSRHA 161
>gi|357131644|ref|XP_003567446.1| PREDICTED: uncharacterized protein At3g17611-like [Brachypodium
distachyon]
Length = 326
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 188/303 (62%), Gaps = 18/303 (5%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
+PPVTAALLA NTL+YLRP LD+L+P + V FNPHLI+++ DL+RF S F+H SE
Sbjct: 33 RPPVTAALLAANTLLYLRPGNLDALLPRLPRVLFNPHLIIEFGDLRRFLFSVFFHTSEPQ 92
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
NM SLLW+G +LE MGS EFA+MV +L+G+SQG TLLL+K L+L D AYY +Y
Sbjct: 93 FVMNMSSLLWRGGRLEEYMGSFEFASMVASLIGLSQGFTLLLSKGLLLLGDGT-AYY-QY 150
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
+ GFSGVL M+ VLN+R+ D + G+ +PA+YA A+L ++Q + V+ +G+L GIL
Sbjct: 151 SSGFSGVLLGMQ-VLNARAGDIV-LFGVCIPAKYAELAQLFLMQALIHEVNIVGNLSGIL 208
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGTVG----GSDT 267
AG+ YL LK +G DPL+ I V+S +RFAR + R + G S
Sbjct: 209 AGLTYLWLK---NGPDPLSDI----ANVVSRSVRFARGIVRSAARRCQSCSGRRVFASVQ 261
Query: 268 RRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSD---QLSRHSNIPLEELRHRRI 324
R +WRC C+ DNS +CE C + S Q + +P+EE+R RR+
Sbjct: 262 REVGQGMWRCTTCSHDNSRSEDVCERCSIPHEDHAFSRRRHLQDVGNEELPVEEIRARRL 321
Query: 325 ERF 327
+RF
Sbjct: 322 QRF 324
>gi|357128028|ref|XP_003565678.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g17611-like [Brachypodium distachyon]
Length = 312
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 165/281 (58%), Gaps = 18/281 (6%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVTAAL+A N L +LRP LD L+P + V +L+Y DL+RFF S FYH SE HL
Sbjct: 38 PPVTAALIAANVLAHLRPGLLDELLPPLWRVIEFXTTLLQYGDLRRFFSSAFYHVSELHL 97
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
NM SLL G +LETSMGS EFA+MV LLG+S+G T+LL+KSL+L + AYY +++
Sbjct: 98 LMNMTSLLSAGDELETSMGSFEFASMVAFLLGLSKGFTILLSKSLLLLGN-NSAYYHQHS 156
Query: 153 VGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILA 212
GFSGVLF M VVLN + + P +YA A L++ Q+ +P SF+GHLGGILA
Sbjct: 157 AGFSGVLFGMDVVLNDLAGEG--------PEKYAVCARLLLTQVLIPEASFIGHLGGILA 208
Query: 213 GILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIY------GRGTVGGSD 266
G+ YL LK P+ + V+ + FAR L R + G G V S
Sbjct: 209 GLTYLCLK---RSPGPIAALFSNIADVVGRSVGFARKLVRSVVVPRRRSNAGGGPVLVSA 265
Query: 267 TRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQ 307
R T +WRC ACT+DNS +C+ C T + S+ +
Sbjct: 266 PRETGRGMWRCSACTYDNSQCEDVCQRCSTPHEEHAFSASR 306
>gi|145332609|ref|NP_001078170.1| rhomboid-like protein 14 [Arabidopsis thaliana]
gi|332642459|gb|AEE75980.1| rhomboid-like protein 14 [Arabidopsis thaliana]
Length = 173
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 134/172 (77%), Gaps = 6/172 (3%)
Query: 162 MKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKG 221
MKVVLNS++EDY++V+G+LVP +YAAWAELI++QMFVP SFLGHLGGILAGI+YLKLKG
Sbjct: 1 MKVVLNSQAEDYSSVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKG 60
Query: 222 GYSGSDPLTTIIRGATGVLSWPLRFARYLF--RRPRIYGRGTVGGSDTRRTAPIIWRCPA 279
YSGSDP+T +RG + +++WPLRF + RR RI GRG VG T P IWRC +
Sbjct: 61 SYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPGIWRCQS 120
Query: 280 CTFDNSGWLSICEMCGTSRS-GNDLSSDQ---LSRHSNIPLEELRHRRIERF 327
CT+DNSGWLS CEMCG+ R+ GN S +Q LS +++PL+ELR RR+ERF
Sbjct: 121 CTYDNSGWLSACEMCGSGRARGNGWSLNQGPALSSSNDLPLDELRRRRVERF 172
>gi|242057069|ref|XP_002457680.1| hypothetical protein SORBIDRAFT_03g011560 [Sorghum bicolor]
gi|241929655|gb|EES02800.1| hypothetical protein SORBIDRAFT_03g011560 [Sorghum bicolor]
Length = 342
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 169/319 (52%), Gaps = 43/319 (13%)
Query: 43 NTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWK 102
N L++LRP LD+++P V NP++ K++D K FFLSP+ H +E HLF NM +LLW
Sbjct: 31 NVLVFLRPGALDAILPKKAYVALNPNMFFKFRDWKTFFLSPWCHTNEVHLFSNMTTLLWT 90
Query: 103 GIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAM 162
G++LETSMG+ + A+L +S+G L+ YY E+ +GFSGVLF +
Sbjct: 91 GVELETSMGT-AWPVTGCAILLLSKGCLSLVGNG--------APYYDEFCIGFSGVLFGI 141
Query: 163 KVVLNS----RSEDYTNVHGLLV-PARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYL 217
K V S S D+ ++ G++V PA+YA WAEL+++Q +P SF+GHLGGILAG +YL
Sbjct: 142 KAVSMSAHAAESGDFLHLAGMVVIPAKYAVWAELLLVQALMPNTSFVGHLGGILAGHVYL 201
Query: 218 KLKGGYSGSDP--------------LTTIIRGATGVLSWPLRFARYLFR-------RPRI 256
LKG ++ DP L +I T ++ +RFA+ L + +
Sbjct: 202 WLKGLFNRPDPGPFNRLGPGPGPGPLYRLISCGTRAMALSVRFAQKLVSSSVQPLPKGHV 261
Query: 257 YGRGTVG--GSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSN- 313
GR VG S R W C +C NS ICE C T R S RH
Sbjct: 262 TGRRRVGCCASAARGCPKGCWICSSCNDYNSLATDICERCSTMREDYCAFSWGQQRHHQP 321
Query: 314 -----IPLEELRHRRIERF 327
+ +EELR RR+ RF
Sbjct: 322 LWNRELTVEELRLRRVHRF 340
>gi|357128026|ref|XP_003565677.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g17611-like [Brachypodium distachyon]
Length = 322
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 173/317 (54%), Gaps = 26/317 (8%)
Query: 3 RGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHE 62
+G GW +S + + L + +P PPVTAAL+A N L Y RP LD +P +
Sbjct: 10 QGHVGWWLSSLLTAPVLLQYVSGDAGIP--PPVTAALIAANVLAYFRPGPLDKHLPPLCR 67
Query: 63 VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL 122
V +L+Y DL+RFF FYHA+E HL NM SLLW G QLETS GS +FA+MV +L
Sbjct: 68 VIEFXITLLQYGDLRRFFFPAFYHANEFHLLQNMTSLLWTGDQLETSXGSFKFASMVASL 127
Query: 123 LGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP 182
LG+S+G T+LL++ +L + ++AYY ++ +GFSGVLF M VVLN + + + +
Sbjct: 128 LGLSKGFTILLSEGFLLLGN-DKAYYQQHYIGFSGVLFGMDVVLNDSVGEGPEMCAVFL- 185
Query: 183 ARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRG------A 236
A L++IQ +P SF+ HLGGILAG+ L K G DP+ ++ A
Sbjct: 186 -----CANLLLIQDLIPEASFIAHLGGILAGLTCLCWK---RGPDPIIALVSNIADVMIA 237
Query: 237 TGVLSWPLRFARYLFRRPRIYGRGT--------VGGSDTRRTAPIIWRCPACTFDNSGWL 288
+ ++S + FA L R + R V S R T +WRC C+FDNS +
Sbjct: 238 SMIVSQLVGFALKLVRSAVVPRRRRRSSVGGGPVLCSAPRETNRGMWRCSICSFDNSQFE 297
Query: 289 SICEMCGTSRSGNDLSS 305
+CE C T + S
Sbjct: 298 DVCERCSTPHEDHAFSC 314
>gi|361067741|gb|AEW08182.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176329|gb|AFG71694.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176331|gb|AFG71695.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176333|gb|AFG71696.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176335|gb|AFG71697.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176337|gb|AFG71698.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176339|gb|AFG71699.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176341|gb|AFG71700.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176343|gb|AFG71701.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176345|gb|AFG71702.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176347|gb|AFG71703.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176349|gb|AFG71704.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176351|gb|AFG71705.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176353|gb|AFG71706.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176355|gb|AFG71707.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176357|gb|AFG71708.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176359|gb|AFG71709.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176361|gb|AFG71710.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
Length = 158
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 117/159 (73%), Gaps = 4/159 (2%)
Query: 106 LETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVV 165
LE MGS EFA+MV LLG+S GI ++ AK L FFDY SE AVGFS VLFA+KVV
Sbjct: 1 LERMMGSTEFASMVAVLLGLSHGIVVVTAKVLATFFDYPYPLTSECAVGFSAVLFALKVV 60
Query: 166 LNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSG 225
LNS S + TNV+G++VPAR+AAWAEL++IQMFVPGVSFLGHL GI AGILYL+ + +SG
Sbjct: 61 LNSNSPNLTNVYGVVVPARHAAWAELLLIQMFVPGVSFLGHLSGIFAGILYLRFRRFFSG 120
Query: 226 SDPLTTIIRGATGVLSWPLRFARYLF---RRPRIYGRGT 261
S+PL II T ++ WPLRF + F RRP +G GT
Sbjct: 121 SNPLPPIISKLTWIIGWPLRFFQGQFIGYRRPT-FGHGT 158
>gi|361067743|gb|AEW08183.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
Length = 159
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 116/160 (72%), Gaps = 5/160 (3%)
Query: 106 LETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVV 165
LE MGS EFA+MV LLG+S GI ++ AK L FFDY SE AVGFS VLFA+KVV
Sbjct: 1 LERMMGSTEFASMVAVLLGLSHGIVVVTAKVLATFFDYPYPLTSECAVGFSAVLFALKVV 60
Query: 166 LNSRSEDYTNVHG-LLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYS 224
LNS S D T V+G ++VPARYAAWAEL++IQMFVPGVSF+GHL GI AGILYL+ + +
Sbjct: 61 LNSSSSDPTYVYGGVVVPARYAAWAELLLIQMFVPGVSFIGHLSGIFAGILYLRFRRFFY 120
Query: 225 GSDPLTTIIRGATGVLSWPLRFARYLF---RRPRIYGRGT 261
GS+PL IIR T ++ WPLRF + F RRP +G GT
Sbjct: 121 GSNPLPPIIRKLTWIIGWPLRFFQGQFIGYRRPT-FGHGT 159
>gi|302755222|ref|XP_002961035.1| hypothetical protein SELMODRAFT_28081 [Selaginella moellendorffii]
gi|302767114|ref|XP_002966977.1| hypothetical protein SELMODRAFT_17932 [Selaginella moellendorffii]
gi|300164968|gb|EFJ31576.1| hypothetical protein SELMODRAFT_17932 [Selaginella moellendorffii]
gi|300171974|gb|EFJ38574.1| hypothetical protein SELMODRAFT_28081 [Selaginella moellendorffii]
Length = 155
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
KPPVTAAL+ N ++YLRP L ++PSI EV +P+L+L+ D+KR LS FYH E+H
Sbjct: 2 KPPVTAALILANVIVYLRPGSLHEVLPSIEEVCLSPYLVLRNFDVKRLLLSAFYHVDEAH 61
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
LFYNM+SLLWKG+QLE MGS +FA+MV LLGMS G+ +LL +LV A Y+
Sbjct: 62 LFYNMISLLWKGVQLEGRMGSPKFASMVALLLGMSHGLMVLLG-TLVSTLTDSPAPYTSC 120
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYA 186
AVGFS +LFA+KVVLN S V+G +VPAR+A
Sbjct: 121 AVGFSALLFALKVVLNHNSPANAIVYGFVVPARFA 155
>gi|344292440|ref|XP_003417935.1| PREDICTED: rhomboid domain-containing protein 1-like [Loxodonta
africana]
Length = 315
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 123/219 (56%), Gaps = 20/219 (9%)
Query: 33 PPVTAALLATNTLIYLRPA--FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A LA NT ++L P DS + S+ + + + KD +R LSPF+HA +
Sbjct: 28 PPVTLATLALNTWLFLNPVKPLFDSCI-SVEKCY-------QQKDWQRLLLSPFHHADDW 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM S+LWKGI LE +GS FA ++ ++ + LLL SL F D E +
Sbjct: 80 HLYFNMASMLWKGINLERRLGSRWFAYIIATFSLLTGVVYLLLESSLAAFLD-EPDFRRT 138
Query: 151 YAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGVLFA+KV+ N + N+ GL VP RYA W EL+ I F PG SF GHL G
Sbjct: 139 CAVGFSGVLFALKVLNNHYCPGCFVNILGLPVPNRYACWVELVAIHFFTPGTSFAGHLAG 198
Query: 210 ILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFAR 248
IL G++Y + PL I+ G+ S + + R
Sbjct: 199 ILVGLMYTQ--------GPLKKIMETCAGIFSSDIGYPR 229
>gi|325180697|emb|CCA15102.1| serine protease family S54 putative [Albugo laibachii Nc14]
Length = 295
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 128/212 (60%), Gaps = 4/212 (1%)
Query: 2 ERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIH 61
R G R R +L L L + ++ KPP+T +L+ + ++ R F S
Sbjct: 5 SRSRHGQRDKRNLLVLYML--IQKIMQMDRKPPLTISLIVLMSNLHFR-IFDIGATLSPE 61
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
P+LI++ + +R S F+H + HL++NM+S LWKG QLE+ MGS FA +++
Sbjct: 62 SYMLCPNLIVRRHEWERLIGSAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYHFACLLIY 121
Query: 122 LLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLV 181
LL +S G+ ++LA L+ + +++ ++GFS VLF +KVVLNS+S + +N++G V
Sbjct: 122 LLLVSHGL-IVLASYLIFKLQHNPHAWTQCSLGFSAVLFGLKVVLNSKSPNTSNIYGFQV 180
Query: 182 PARYAAWAELIIIQMFVPGVSFLGHLGGILAG 213
P +YAAW EL++I + VP SFLGHL GI+AG
Sbjct: 181 PTKYAAWLELVLIHVLVPDASFLGHLCGIVAG 212
>gi|299471888|emb|CBN77058.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 418
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 127/224 (56%), Gaps = 22/224 (9%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLV---------------PSIH 61
+LAL ++ +L KPP+T AL+A + ++L+P L I
Sbjct: 38 ILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRKGVFEWSWLTGGFDHIR 97
Query: 62 EVWFNPHLILK-YK-----DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEF 115
V P IL Y+ +++R +SPF H + HL+YNM S L KG+ LE +MG+ F
Sbjct: 98 NVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAF 157
Query: 116 AAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTN 175
A ++ L SQ + +L A L++ FD ++ AVGFSGVLFA+K VL+ RS T+
Sbjct: 158 AGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHA-CAVGFSGVLFALKYVLSRRSPGVTS 216
Query: 176 VHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKL 219
V G V RYA W EL++I + VP SFLGHL GILAG+LY+++
Sbjct: 217 VMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEV 260
>gi|417414315|gb|JAA53453.1| Putative rhomboid domain-containing protein 1, partial [Desmodus
rotundus]
Length = 287
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 119/217 (54%), Gaps = 16/217 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L L+ S V + KD +R LSPF+HA + HL
Sbjct: 28 PPVTLATLAINIWFFLSP--LKPLLSSCLSV----ETCYQEKDWQRLLLSPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKGIQLE +GS F A V+ + G+ L+ +S + F E + A
Sbjct: 82 YFNMVSMLWKGIQLERRLGSRWF-AYVITTFSLLTGVVYLVLESALAEFMEEPGFKMNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP R+A WAEL+ I + PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNVLGFPVPNRFACWAELVAIHLISPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFAR 248
G++Y PL ++ G+ S+ + R
Sbjct: 201 VGLMYTH--------GPLKKLMEMCAGIFSFNTGYPR 229
>gi|51968586|dbj|BAD42985.1| unknown protein [Arabidopsis thaliana]
Length = 139
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 101/138 (73%), Gaps = 6/138 (4%)
Query: 196 MFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLF--RR 253
MFVP SFLGHLGGILAGI+YLKLKG YSGSDP+T +RG + +++WPLRF + RR
Sbjct: 1 MFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRR 60
Query: 254 PRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS-GNDLSSDQ---LS 309
RI GRG VG T P IWRC +CT+DNSGWLS CEMCG+ R+ GN S +Q LS
Sbjct: 61 RRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGSGRARGNGWSLNQGPALS 120
Query: 310 RHSNIPLEELRHRRIERF 327
+++PL+ELR RR+ERF
Sbjct: 121 SSNDLPLDELRRRRVERF 138
>gi|196000606|ref|XP_002110171.1| hypothetical protein TRIADDRAFT_53891 [Trichoplax adhaerens]
gi|190588295|gb|EDV28337.1| hypothetical protein TRIADDRAFT_53891 [Trichoplax adhaerens]
Length = 348
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 124/208 (59%), Gaps = 5/208 (2%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PP+T A + N+++++ D +P + EV + + + +R L F+HAS+ HL
Sbjct: 28 PPITLATIGLNSILFMN-LLPDYRLPHLSEVCISVKSVWYMNEWQRLILGAFFHASDMHL 86
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+YNM+S LWKGI LE GS F +M+++ ++ +TL+ + + Y+++ A
Sbjct: 87 YYNMVSFLWKGIHLEKKYGSLHFLSMIISFTALT-NVTLVAISYAIGHHTDKLHYFTDCA 145
Query: 153 VGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELIIIQMFVPGVSFLGHLGGI 210
VGFSGV+FA+KVV S TN L+P +RYA WAEL++IQ+ VP SFLGHL GI
Sbjct: 146 VGFSGVIFALKVVATYVSPPSTNYIMNLIPISSRYACWAELVLIQVLVPNSSFLGHLAGI 205
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATG 238
L G+ Y+K G S D + +I+ G+ G
Sbjct: 206 LVGLAYVKTPIG-SILDSIFSIVTGSRG 232
>gi|148237462|ref|NP_001087563.1| rhomboid domain containing 1 [Xenopus laevis]
gi|51258484|gb|AAH80107.1| MGC84665 protein [Xenopus laevis]
Length = 306
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 157/302 (51%), Gaps = 30/302 (9%)
Query: 33 PPVTAALLATNTLIYLRP-AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A L N ++L P L + S+ E ++ +D +RF LSPF+HA + H
Sbjct: 28 PPVTLAALGLNIYLFLNPLKPLLKVCISVREGYYG-------RDWQRFLLSPFHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM+SLLWKG +LE +G+ FA++++ + G+ ++ + ++ F + ++ +
Sbjct: 81 LYFNMVSLLWKGAKLERRLGTGLFASIILVFSQLI-GVVYVILEYVLAEFTGDPSFKMQC 139
Query: 152 AVGFSGVLFAMKVVLNS-RSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N +NV G+L+P +YA WAEL+ I + PG SF+GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNHYHPGGSSNVFGILIPNKYACWAELVAIHLLSPGTSFVGHLSGI 199
Query: 211 LAGILYLK--LKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRR---PRIYGRGTVGGS 265
L G+LY + LK + S G S +A Y +++ PR Y T G +
Sbjct: 200 LVGLLYTQGPLKNILTASFSNGPSSAGRNFNYSGHSGYADYQYQQHQSPRSYDFYTGGLN 259
Query: 266 DTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIE 325
+ + I S+ E G R + + S +EE+R RR+
Sbjct: 260 EDEQLQQAIRE------------SLNERDGNRRPQQNAPRSSAEQPS---VEEIRRRRLN 304
Query: 326 RF 327
RF
Sbjct: 305 RF 306
>gi|291392324|ref|XP_002712556.1| PREDICTED: rhomboid domain containing 1 [Oryctolagus cuniculus]
Length = 316
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 143/306 (46%), Gaps = 31/306 (10%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N ++L P L L S V + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNIWLFLNP--LKPLYNSCISV----ERCYQQKDWQRLLLSPVHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG+ LE +GS F A ++A + G+ LL + + F E Y A
Sbjct: 82 YFNMVSMLWKGVNLERRLGSKWF-AYIIATFSLLTGVVYLLLQFVFAEFMNEPDYRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL+ I F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWAELVAIHFFTPGSSFSGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF--ARYLFRRPRIYGRGTVGGSD--- 266
G++Y + PL ++ G+ S + + +Y F G G D
Sbjct: 201 VGLMYTQ--------GPLKKMMETCAGMFSSNIDYPGQQYYFN-----SSGYSGYQDHYP 247
Query: 267 -----TRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRH 321
+ AP + L GN +S P EE+R
Sbjct: 248 YSRPGSYEQAPRNYDVYTAGLSEEEQLDRALRASLWDRGNSRNSPPPYGFHLSPEEEMRR 307
Query: 322 RRIERF 327
RR++RF
Sbjct: 308 RRLQRF 313
>gi|149711182|ref|XP_001496461.1| PREDICTED: rhomboid domain-containing protein 1-like [Equus
caballus]
Length = 316
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 115/210 (54%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N ++L P L SL S V + KD +R LSPF+HA + HL
Sbjct: 28 PPVTLATLALNIWLFLNP--LKSLYNSCLSV----EKCYQQKDWQRLLLSPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA +++ ++ + L L +L F D E + A
Sbjct: 82 YFNMASMLWKGINLERRLGSKWFAYIIITFSLLTGVVYLFLEFALAEFMD-EPDFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP ++A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNKFACWAELVAIHFISPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y PL I+ G+ S
Sbjct: 201 VGLMYTH--------GPLKKIMETCAGMFS 222
>gi|62858293|ref|NP_001016449.1| rhomboid domain containing 1 [Xenopus (Silurana) tropicalis]
gi|89272850|emb|CAJ82135.1| novel protein containing rhomboid domain [Xenopus (Silurana)
tropicalis]
Length = 308
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 153/306 (50%), Gaps = 36/306 (11%)
Query: 33 PPVTAALLATNTLIYLRP-AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A L N ++L P L + S+ + ++ +D +RF LSPF+HA + H
Sbjct: 28 PPVTLAALGLNIFLFLNPFKPLLEVCISVRDGYYG-------RDWQRFLLSPFHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM+SLLWKG +LE +GS FA +++ + + ++L L F + +Y +
Sbjct: 81 LYFNMVSLLWKGAKLERKLGSGLFATIIIVFSQLIGVVYVILEYGLAEFTG-DPSYKMQC 139
Query: 152 AVGFSGVLFAMKVVLN-SRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N +NV G+L+P +YA WAEL+ I + PG SF+GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNYYHPGGSSNVFGILIPNKYACWAELVAIHLLSPGTSFVGHLSGI 199
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGTVGGSDTRRT 270
L G+LY + PL I+ + P R G S + +
Sbjct: 200 LVGLLYTQ--------GPLKKILISTASFSNGPSSTQRNFSYSGY---SGYADDSYQQHS 248
Query: 271 APIIWRCPACTFDNSGWL------SICEMCGTSRSGNDL---SSDQLSRHSNIPLEELRH 321
+ + FD L S+ E G R + S++QLS +EE+R
Sbjct: 249 SSRSYDLYTGGFDEDEQLQQAIRESLHERDGHRRPQQNAPWSSAEQLS------VEEIRR 302
Query: 322 RRIERF 327
RR+ RF
Sbjct: 303 RRLNRF 308
>gi|395823332|ref|XP_003784941.1| PREDICTED: rhomboid domain-containing protein 1 [Otolemur
garnettii]
Length = 316
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 143/301 (47%), Gaps = 21/301 (6%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N+ ++L P + +H + +++D +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNSWLFLNP------LKPLHNSCLSVEKCYEHRDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKGI LE +GS FA V+A + G+ LL + + F E A
Sbjct: 82 YFNMVSMLWKGINLERRLGSRWFAC-VIATFSLLTGLVYLLLQFALAEFMREPELRRSCA 140
Query: 153 VGFSGVLFAMKVVLNSR-SEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP R+A WAEL+ I +F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYFPGGFVNVLGFPVPNRFACWAELVAIHLFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFA--RYLFRRPRIYGRGT---VGGSD 266
G++Y + PL I+ G+ S + ++ +Y F G GG
Sbjct: 201 VGLMYTQ--------GPLKKIMEACAGIFSSGIGYSGQQYYFNSSGHSGYQNHYPYGGPG 252
Query: 267 TRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIER 326
P + L GN SS P EE+R +R+ R
Sbjct: 253 HSEEVPRNYDVYTAGLSEEEQLERALRASLQDRGNSRSSPPPYGFRLSPEEEMRRQRLHR 312
Query: 327 F 327
F
Sbjct: 313 F 313
>gi|296205750|ref|XP_002749971.1| PREDICTED: rhomboid domain-containing protein 1 [Callithrix
jacchus]
Length = 316
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L SL S V + D +R LSPF+HA + HL
Sbjct: 28 PPVTLATLALNIWFFLNP--LKSLYSSCLSV----EKCYQQNDWQRLLLSPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS F ++ ++ + LLL ++ F D E + A
Sbjct: 82 YFNMASMLWKGINLEKRLGSRWFVCVITTFSILTGVVYLLLQFAVAEFMD-EPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP R+A W EL+ I + PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNRFACWVELVAIHLCSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y + PL I+ G+ S
Sbjct: 201 VGLMYTQ--------GPLKKIMEACAGIFS 222
>gi|410969603|ref|XP_003991284.1| PREDICTED: rhomboid-related protein 4 [Felis catus]
Length = 316
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 140/304 (46%), Gaps = 27/304 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L L+ S V + KD +R LSPF+HA + HL
Sbjct: 28 PPVTLATLAVNIWFFLSP--LKPLLSSCLSV----ETCYQQKDWQRLLLSPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++V ++ + LLL +L F + E + A
Sbjct: 82 YFNMASMLWKGINLERRLGSKWFAYVIVTFSLLTGVVYLLLEFALAEFMN-EPGFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP R+A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFANVLGFPVPNRFACWAELVAIHFISPGASFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF--ARYLF------RRPRIYGRGTVG 263
G++Y PL I+ G P+ + +Y F R Y G G
Sbjct: 201 VGLMYTL--------GPLKKIMEMCAGNFPSPVHYPGQQYYFNSSGYSRYQDYYPHGMPG 252
Query: 264 GSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRR 323
S+ P + L GN P EE+R +R
Sbjct: 253 YSE---EVPRDYDAYTAGLSEEEQLERALRASLWDRGNSPPGPLPYGFRLSPEEEMRRKR 309
Query: 324 IERF 327
+ RF
Sbjct: 310 LHRF 313
>gi|73994096|ref|XP_543275.2| PREDICTED: rhomboid domain-containing protein 1 [Canis lupus
familiaris]
Length = 316
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 137/301 (45%), Gaps = 21/301 (6%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P + ++E + + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNVWFFLNP------LKPLYESCLSVEKCYQQKDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++V ++ + L L +L F D E + A
Sbjct: 82 YFNMASMLWKGINLERRLGSRWFAYIIVTFSLLTGVVYLFLEFALAEFTD-EPGFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFANILGFPVPNRFACWAELVAIHFISPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF--ARYLFRRPRIYGRGT---VGGSD 266
G++Y PL I+ G+ + + +Y F G G
Sbjct: 201 VGLMYTH--------GPLKKIMEKCAGIFPSNIHYPGQQYHFNSSGYSGYQDYYPYGRPG 252
Query: 267 TRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIER 326
AP+ + L GN S P EE+R +R+ R
Sbjct: 253 YPEEAPMNYNAYTAGLSEEEQLERALRASLWDRGNSRPSPPPYGFHLSPEEEMRRKRLHR 312
Query: 327 F 327
F
Sbjct: 313 F 313
>gi|403266722|ref|XP_003925512.1| PREDICTED: rhomboid domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 315
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L SL S V + D +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNIWFFLNP--LKSLYSSCLSV----ERCYQQNDWQRLLLSPVHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++ ++ + LLL ++ F D E + A
Sbjct: 82 YFNMASMLWKGIHLEKRLGSRWFACVITTFSVLTGVVYLLLQFAVAEFMD-EPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP R+A W EL+ I + PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNRFACWVELVAIHLCSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y + PL I+ G+ S
Sbjct: 201 VGLMYTQ--------GPLKKIMEACAGIFS 222
>gi|71682851|gb|AAI01263.1| Rhomboid domain containing 1 [Homo sapiens]
Length = 315
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 116/211 (54%), Gaps = 18/211 (8%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A LA N +L P L S S+ + + + KD +R LSP +HA + H
Sbjct: 28 PPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQKDWQRLLLSPLHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM S+LWKGI LE +GS FA ++ A ++ + LLL ++ F D E +
Sbjct: 81 LYFNMASMLWKGINLERRLGSRWFAYVITAFSVLTGVVYLLLQFAVAEFMD-EPDFKRSC 139
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGI 199
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
L G++Y + PL I+ G S
Sbjct: 200 LVGLMYTQ--------GPLKKIMEACAGGFS 222
>gi|444730882|gb|ELW71255.1| Rhomboid domain-containing protein 1 [Tupaia chinensis]
Length = 278
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 112/207 (54%), Gaps = 16/207 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L L+ S V + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNIWFFLNP--LKPLIYSCLSV----EKCYQQKDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKG+ LE +GS F A V++ + G+ LL + V F E Y A
Sbjct: 82 YFNMASMLWKGVHLERRLGSRRF-AYVISTFSLLTGVVYLLLQFAVAEFMDEPDYRKSCA 140
Query: 153 VGFSGVLFAMKVVLNSR-SEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP ++A WAEL+ I F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYFPGGFVNVLGFPVPNKFACWAELVAIHFFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATG 238
G++Y + PL I+ G
Sbjct: 201 VGLMYTQ--------GPLKKILEACAG 219
>gi|33300639|ref|NP_115652.2| rhomboid-related protein 4 [Homo sapiens]
gi|263190666|ref|NP_001161080.1| rhomboid-related protein 4 [Homo sapiens]
gi|74723955|sp|Q8TEB9.1|RHBL4_HUMAN RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1; AltName:
Full=Rhomboid-like protein 4
gi|18676811|dbj|BAB85031.1| unnamed protein product [Homo sapiens]
gi|51947534|gb|AAU14246.1| HSD-50 [Homo sapiens]
gi|71680537|gb|AAI01265.1| Rhomboid domain containing 1 [Homo sapiens]
gi|71682034|gb|AAI01264.1| Rhomboid domain containing 1 [Homo sapiens]
gi|71682037|gb|AAI01266.1| Rhomboid domain containing 1 [Homo sapiens]
gi|83405869|gb|AAI11057.1| Rhomboid domain containing 1 [Homo sapiens]
gi|119591247|gb|EAW70841.1| rhomboid domain containing 1, isoform CRA_a [Homo sapiens]
gi|119591248|gb|EAW70842.1| rhomboid domain containing 1, isoform CRA_a [Homo sapiens]
Length = 315
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 116/211 (54%), Gaps = 18/211 (8%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A LA N +L P L S S+ + + + KD +R LSP +HA + H
Sbjct: 28 PPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQKDWQRLLLSPLHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM S+LWKGI LE +GS FA ++ A ++ + LLL ++ F D E +
Sbjct: 81 LYFNMASMLWKGINLERRLGSRWFAYVITAFSVLTGVVYLLLQFAVAEFMD-EPDFKRSC 139
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGI 199
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
L G++Y + PL I+ G S
Sbjct: 200 LVGLMYTQ--------GPLKKIMEACAGGFS 222
>gi|332251234|ref|XP_003274752.1| PREDICTED: uncharacterized protein LOC100579431 isoform 1 [Nomascus
leucogenys]
gi|332251236|ref|XP_003274753.1| PREDICTED: uncharacterized protein LOC100579431 isoform 2 [Nomascus
leucogenys]
Length = 316
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 141/302 (46%), Gaps = 23/302 (7%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A LA N +L P L S S+ + + + KD +R LSP +HA + H
Sbjct: 28 PPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQKDWQRLLLSPLHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM S+LWKGI LE +GS FA ++ ++ + LLL ++ F D E +
Sbjct: 81 LYFNMASMLWKGINLERRLGSRWFAYVISTFSVLTGVVYLLLQFAVAEFMD-EPDFKRSC 139
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I + PG SF GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLLSPGTSFAGHLAGI 199
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF--ARYLFRRPRIYGRGTV---GGS 265
L G++Y + PL TI+ G S + + +Y F G G
Sbjct: 200 LVGLMYTQ--------GPLKTIMEACAGGFSSNVGYPGQQYYFNSSGSSGYQDYYPHGRP 251
Query: 266 DTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIE 325
D AP + L GN +S P EE+R +R+
Sbjct: 252 DHYEEAPRNYDTYTAGLSEEEQLERALRASLWDQGNTRNSPPPYGFHLSPEEEMRRQRLH 311
Query: 326 RF 327
RF
Sbjct: 312 RF 313
>gi|355750890|gb|EHH55217.1| hypothetical protein EGM_04375 [Macaca fascicularis]
Length = 316
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 140/306 (45%), Gaps = 31/306 (10%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P ++ + + KD +R LSP +HA++ HL
Sbjct: 28 PPVTLATLALNIWFFLNPQ------KPLYSSCLSVEKCCQQKDWQRLLLSPLHHANDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS F A+V+ + G+ LL + V F E + A
Sbjct: 82 YFNMASMLWKGIHLERRLGSRWF-ALVITTFSILTGVVYLLLQFAVAEFMDEPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF--ARYLFRRPRIYGRGTVGGSDTR- 268
G++Y + PL ++ G S + + +Y F G G+ G D
Sbjct: 201 VGLMYTQ--------GPLKKMMEACAGGFSSNVGYPGQQYYFN-----GSGSSGYQDYDP 247
Query: 269 -------RTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRH 321
AP + L GN +S P EE+R
Sbjct: 248 HGRPGHYEEAPRNYDTYTAGLSEEEQLERALQASLWDRGNTRNSPPPYGFRLSPEEEMRR 307
Query: 322 RRIERF 327
+R+ RF
Sbjct: 308 QRLHRF 313
>gi|351715240|gb|EHB18159.1| Rhomboid domain-containing protein 1 [Heterocephalus glaber]
Length = 315
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 112/210 (53%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N ++L P L P H + + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLAVNIWLFLTP-----LKPLYHSC-LSVEKCYQQKDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++ ++ + LLL + F D E + A
Sbjct: 82 YFNMASMLWKGINLERRLGSRWFAYVLTTFSLLTGVVYLLLQVACAEFMD-EPDFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP R A WAEL+ I F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNVLGFPVPNRLACWAELLAIHFFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y PL I+ G+ S
Sbjct: 201 VGLMYTH--------GPLKKIMETCAGLFS 222
>gi|426338762|ref|XP_004033341.1| PREDICTED: rhomboid-related protein 4 [Gorilla gorilla gorilla]
Length = 315
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 115/211 (54%), Gaps = 18/211 (8%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A LA N +L P L S S+ + + + KD +R LSP +HA + H
Sbjct: 28 PPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQKDWQRLLLSPLHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM S+LWKGI LE +GS FA ++ ++ + LLL ++ F D E +
Sbjct: 81 LYFNMASMLWKGINLERRLGSRWFAYVITTFSVLTGVVYLLLQFAVAEFMD-EPDFKRSC 139
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGI 199
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
L G++Y + PL I+ G S
Sbjct: 200 LVGLMYTQ--------GPLKKIMEACAGGFS 222
>gi|410036272|ref|XP_003950028.1| PREDICTED: rhomboid-related protein 4 [Pan troglodytes]
gi|410211256|gb|JAA02847.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410266108|gb|JAA21020.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410301220|gb|JAA29210.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410339123|gb|JAA38508.1| rhomboid domain containing 1 [Pan troglodytes]
Length = 315
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 115/211 (54%), Gaps = 18/211 (8%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A LA N +L P L S S+ + + + KD +R LSP +HA + H
Sbjct: 28 PPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQKDWQRLLLSPLHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM S+LWKGI LE +GS FA ++ ++ + LLL ++ F D E +
Sbjct: 81 LYFNMASMLWKGINLERRLGSRWFAYVITTFSVLTGVVYLLLQFAVAEFMD-EPDFKRSC 139
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGI 199
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
L G++Y + PL I+ G S
Sbjct: 200 LVGLMYTQ--------GPLKKIMEACAGGFS 222
>gi|109101279|ref|XP_001110165.1| PREDICTED: rhomboid domain-containing protein 1-like isoform 4
[Macaca mulatta]
gi|297265038|ref|XP_001110119.2| PREDICTED: rhomboid domain-containing protein 1-like isoform 3
[Macaca mulatta]
Length = 316
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P ++ + + KD +R LSP +HA++ HL
Sbjct: 28 PPVTLATLALNIWFFLNPQ------KPLYSSCLSVEKCCQQKDWQRLLLSPLHHANDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS F A+V+ + G+ LL + V F E + A
Sbjct: 82 YFNMASMLWKGIHLERRLGSRWF-ALVITTFSILTGVVYLLLQFAVAEFMDEPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y + PL ++ G S
Sbjct: 201 VGLMYTQ--------GPLKKMMEACAGGFS 222
>gi|355565238|gb|EHH21727.1| hypothetical protein EGK_04857 [Macaca mulatta]
Length = 316
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P ++ + + KD +R LSP +HA++ HL
Sbjct: 28 PPVTLATLALNIWFFLNPQ------KPLYSSCLSVEKCCQQKDWQRLLLSPLHHANDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS F A+V+ + G+ LL + V F E + A
Sbjct: 82 YFNMASMLWKGIHLERRLGSRWF-ALVITTFSILTGVVYLLLQFAVAEFMDEPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y + PL ++ G S
Sbjct: 201 VGLMYTQ--------GPLKKMMEACAGGFS 222
>gi|380817122|gb|AFE80435.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|380817124|gb|AFE80436.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|383422139|gb|AFH34283.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|383422141|gb|AFH34284.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|384949790|gb|AFI38500.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|384949792|gb|AFI38501.1| rhomboid domain-containing protein 1 [Macaca mulatta]
Length = 316
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P ++ + + KD +R LSP +HA++ HL
Sbjct: 28 PPVTLATLALNIWFFLNPQ------KPLYSSCLSVEKCCQQKDWQRLLLSPLHHANDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS F A+V+ + G+ LL + V F E + A
Sbjct: 82 YFNMASMLWKGIHLERRLGSRWF-ALVITTFSILTGVVYLLLQFAVAEFMDEPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y + PL ++ G S
Sbjct: 201 VGLMYTQ--------GPLKKMMEACAGGFS 222
>gi|345307084|ref|XP_001505522.2| PREDICTED: rhomboid domain-containing protein 1-like
[Ornithorhynchus anatinus]
Length = 318
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N ++L P V S+ + + + D +R LSPF+HA + HL
Sbjct: 28 PPVTLASLALNIFLFLNP------VKSLRKTCISVEECFEQGDWQRLLLSPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS +F A+++A + GI ++ + + F E AY + A
Sbjct: 82 YFNMVSMLWKGMKLEKRLGSGKF-AIIIASFSVLIGIVYMILEFALAEFLAEPAYKMQCA 140
Query: 153 VGFSGVLFAMKVVLNS-RSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N N+ G V RY+ W EL+ I + PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYHPGGSINLMGFPVSNRYSCWVELVAIHLLSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y PL TI+ + S
Sbjct: 201 VGLMYTL--------GPLKTILERCADIFS 222
>gi|334347379|ref|XP_001373833.2| PREDICTED: rhomboid domain-containing protein 1-like [Monodelphis
domestica]
Length = 336
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 123/230 (53%), Gaps = 18/230 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N ++L P + H V + + KD +R LSPF+H + HL
Sbjct: 28 PPVTLACLALNVWLFLSP------LKPFHWVCLSVESCYEKKDWQRLLLSPFHHVDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM SLLWKG+ LE +GS FA ++ + I L L SL D + Y
Sbjct: 82 YFNMASLLWKGLTLERRLGSFWFAYVISVFSILIGVIYLALEYSLAELLD-QPEYKMHCT 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
+GFSGVLFA+KV+ N+ + +TN+ GL +P +YA W EL++I + P SF GHL GI+
Sbjct: 141 IGFSGVLFALKVLNNNYNPGGHTNIMGLYIPNKYACWMELLMIHLLTPKTSFAGHLAGII 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWP--LRFARYLFRRPRIYGR 259
G+LY+ PL I++ G+ + LR +Y F P G+
Sbjct: 201 VGLLYV--------LGPLKRIMKAGAGIFFFDAHLRRQQYSFYDPGYRGQ 242
>gi|397502459|ref|XP_003821875.1| PREDICTED: rhomboid domain-containing protein 1 [Pan paniscus]
Length = 315
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 115/211 (54%), Gaps = 18/211 (8%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A LA N +L P L S S+ + + + KD +R LSP +HA + H
Sbjct: 28 PPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQKDWQRLLLSPLHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM S+LWKGI LE +GS FA ++ ++ + LLL ++ F D E +
Sbjct: 81 LYFNMASMLWKGINLERRLGSRWFAYVITTFSVLTGVVYLLLQFAVAEFMD-EPDFKRSC 139
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGI 199
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
L G++Y + P+ I+ G S
Sbjct: 200 LVGLMYTQ--------GPVKKIMEACAGGFS 222
>gi|402889541|ref|XP_003908071.1| PREDICTED: rhomboid domain-containing protein 1, partial [Papio
anubis]
Length = 285
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P ++ + + KD +R LSP +HA++ HL
Sbjct: 28 PPVTLATLALNIWFFLNPQ------KPLYSSCLSVEKCCQQKDWQRLLLSPLHHANDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++ ++ + LLL ++ F D E + A
Sbjct: 82 YFNMASMLWKGIHLERRLGSRWFAFVITTFSVLTGVVYLLLQFAVAEFMD-EPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y + PL ++ G S
Sbjct: 201 VGLMYTQ--------GPLKKMMEACAGGFS 222
>gi|426221661|ref|XP_004005027.1| PREDICTED: rhomboid-related protein 4 [Ovis aries]
Length = 322
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 136/301 (45%), Gaps = 21/301 (6%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L L+ S V + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNIWFFLNP--LKPLLSSCLSV----EKCYQQKDWQRLLLSPIHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++V ++ + L L +L F + E + A
Sbjct: 82 YFNMASMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFALAEFLN-EPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
+GFSGVLFA+KV+ N + NV G V R+A W EL+ I PG SF GHL GIL
Sbjct: 141 IGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFACWVELLAIHFISPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF--ARYLFRRPRIYGRGT---VGGSD 266
G++Y PL I+ TG+ + + +Y F G GG
Sbjct: 201 VGLMYTH--------GPLKKIMESCTGIFPSNIDYPGQQYYFNSSGYSGYQDYYPYGGRG 252
Query: 267 TRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIER 326
P + L GN SS P EE+R +R+ R
Sbjct: 253 AYEDVPRNYDMYTAGLSEEEQLERALRASLLDQGNRRSSSPAYGFRLSPEEEMRRQRLHR 312
Query: 327 F 327
F
Sbjct: 313 F 313
>gi|16041108|dbj|BAB69721.1| hypothetical protein [Macaca fascicularis]
Length = 261
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P ++ + + KD +R LSP +HA++ HL
Sbjct: 28 PPVTLATLALNIWFFLNPQ------KPLYSSCLSVEKCCQQKDWQRLLLSPLHHANDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS F A+V+ + G+ LL + V F E + A
Sbjct: 82 YFNMASMLWKGIHLERRLGSRWF-ALVITTFSILTGVVYLLLQFAVAEFMDEPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y + PL ++ G S
Sbjct: 201 VGLMYTQ--------GPLKKMMEACAGGFS 222
>gi|395528133|ref|XP_003766186.1| PREDICTED: rhomboid domain-containing protein 1 [Sarcophilus
harrisii]
Length = 344
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 119/209 (56%), Gaps = 16/209 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A +A N ++L P + I+ + + + KD +R LSPF+HA + HL
Sbjct: 28 PPVTLACIALNIWLFLNP------LKPIYWLCLSVESCYEKKDWQRLLLSPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG+ LE +GS F A ++A+ + G+ L + V +R + A
Sbjct: 82 YFNMVSMLWKGLTLERRLGSFWF-AYIIAVFSLLTGVVYLALEYTVAELLDQREFKVYCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
+GFSGVLFA+KV+ N+ + +TN+ G+ +P +YA W EL++I + P SF GHL GI+
Sbjct: 141 IGFSGVLFALKVLSNNYNPGGHTNIMGMYIPNKYACWVELVMIHLLSPRTSFAGHLAGII 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVL 240
G++Y PL I+ G+L
Sbjct: 201 VGLMY--------TLGPLKMIMEACAGIL 221
>gi|440910625|gb|ELR60400.1| Rhomboid domain-containing protein 1 [Bos grunniens mutus]
Length = 322
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 138/303 (45%), Gaps = 25/303 (8%)
Query: 33 PPVTAALLATNTLIYLRP--AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A LA N +L P L S + S+ + ++ KD +R LSP +HA +
Sbjct: 28 PPVTLATLALNIWFFLNPLKPLLSSCL-SVEKCYYQ-------KDWQRLLLSPLHHADDW 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM+S+LWKGI LE +GS FA ++V ++ + L L +L F + E +
Sbjct: 80 HLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFALAEFLN-EPDFKRN 138
Query: 151 YAVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGVLFA+KV+ N + NV G V R+A W EL+ I PG SF GHL G
Sbjct: 139 CAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFACWVELLAIHFISPGTSFAGHLAG 198
Query: 210 ILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF--ARYLFRRPRIYGRGT---VGG 264
IL G++Y PL I+ TG+ + +Y F G GG
Sbjct: 199 ILVGLMYTH--------GPLKKIMESCTGIFPSNSDYPGQQYYFNSSGYSGYQDYYPYGG 250
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRI 324
P + L GN SS P EE+R +R+
Sbjct: 251 RGAYEDVPRNYDTYTAGLSEEEQLERALRASLLDQGNRRSSPPAYGFRLSPEEEMRRQRL 310
Query: 325 ERF 327
RF
Sbjct: 311 HRF 313
>gi|449670102|ref|XP_002160201.2| PREDICTED: rhomboid-related protein 4-like [Hydra magnipapillata]
Length = 369
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 112/208 (53%), Gaps = 12/208 (5%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PP+T A L N ++L+ S V FN + + R S FYH + HL
Sbjct: 29 PPITLATLVLNVAVFLQLFPFMSTVEKACTSNFN---VFHKGEWPRLIYSSFYHLDDMHL 85
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S +WKG LE M +++ ++ AL + + +LL S++ F Y A
Sbjct: 86 YFNMVSFIWKGRNLERRMKRSQYLVLL-ALFSVLTQVVMLLLNSILSFIFTNDVYLHSCA 144
Query: 153 VGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILA 212
GFS V+FA+KV+ S DY V G++VP+RYA WAEL++IQ+ VP VSF GHL GIL
Sbjct: 145 AGFSAVIFALKVLTTHNSIDYETVMGIVVPSRYACWAELVLIQIMVPNVSFTGHLAGILV 204
Query: 213 GILYLKLKGGYSGSDPLTTIIRGATGVL 240
G++Y+ PL I++ T L
Sbjct: 205 GLMYI--------FGPLKWIVKSVTKFL 224
>gi|146231840|gb|ABQ12995.1| rhomboid domain containing 1 [Bos taurus]
Length = 322
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 139/303 (45%), Gaps = 25/303 (8%)
Query: 33 PPVTAALLATNTLIYLRP--AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A LA N +L P L S + S+ + ++ KD +R LSP +HA +
Sbjct: 28 PPVTLATLALNIWFFLNPLKPLLSSCL-SVEKCYYQ-------KDWQRLLLSPLHHADDW 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM+S+LWKGI LE +GS FA ++V ++ + L L +L F + E +
Sbjct: 80 HLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFALAEFLN-EPDFKRN 138
Query: 151 YAVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGVLFA+KV+ N + NV G V R+A W EL+ I PG SF GHL G
Sbjct: 139 CAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFACWVELLAIHFISPGTSFAGHLAG 198
Query: 210 ILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF--ARYLFRRPRIYGRGT---VGG 264
IL G++Y PL I+ TG+ + + +Y F G GG
Sbjct: 199 ILVGLMYTH--------GPLKKIMELCTGIFPSNIDYPGQQYYFNSSGYSGYQDYYPYGG 250
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRI 324
P + L GN SS P EE+R +R+
Sbjct: 251 RGAYEDVPRNYDTYTSGLSEEEQLERALRASLLDQGNRRSSPPAYGFRLSPEEEMRRQRL 310
Query: 325 ERF 327
RF
Sbjct: 311 HRF 313
>gi|348577789|ref|XP_003474666.1| PREDICTED: rhomboid domain-containing protein 1-like [Cavia
porcellus]
Length = 309
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 108/188 (57%), Gaps = 10/188 (5%)
Query: 33 PPVTAALLATNTLIYLRP-AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A LA N ++L P L S S+ + + + KD +R LSP +HA + H
Sbjct: 28 PPVTLATLAVNIWLFLNPLKPLQSSCLSVEKCY-------QQKDWQRLLLSPLHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM+S+LWKGI LE +GS FA ++ + + + LLL + F D E +
Sbjct: 81 LYFNMVSMLWKGINLERRLGSRWFAYVLATFVLFTGVVYLLLQVACAEFMD-EPDFRRNC 139
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP + A WAEL+ I PG SF GHL GI
Sbjct: 140 AVGFSGVLFALKVLNNHYCPGGFVNILGCPVPNKLACWAELLAIHFLSPGTSFAGHLAGI 199
Query: 211 LAGILYLK 218
L G++Y +
Sbjct: 200 LVGLMYTR 207
>gi|301768701|ref|XP_002919769.1| PREDICTED: rhomboid domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 316
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 111/210 (52%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N ++L P + + E + + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNIWLFLNP------LKPLFESCLSVEKCYQQKDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++V ++ + L L +L E + A
Sbjct: 82 YFNMASMLWKGINLERRLGSRWFAYIIVTFSVLTGVVYLFLEFALAESMG-EPGFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP R+A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFANVLGFPVPNRFACWAELVAIHFISPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y PL I+ G+ S
Sbjct: 201 VGLMYTH--------GPLKKIMEKCAGISS 222
>gi|242006593|ref|XP_002424134.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507451|gb|EEB11396.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 236
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 113/186 (60%), Gaps = 7/186 (3%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVP-SIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PP+T + TL+Y+ F++ VP +V + + ILK KD KR FLS H + H
Sbjct: 30 PPITLGSIVGQTLLYM--GFIN--VPWDKEDVCLSGNGILKLKDWKRLFLSALEHGDDMH 85
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L+YNM S L KG LE GS FA +++ L ++ GI +LLA+++ F+ + +Y
Sbjct: 86 LYYNMASFLIKGRSLEKRYGSKCFAIILIFLTILTSGIYVLLAQAMSEVFEND-SYMKSC 144
Query: 152 AVGFSGVLFAMKVVLNSRSEDY-TNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
A+GFSGV+FA+KV+ + G+ +P +YAAW ELI+I + VP SF+GHL GI
Sbjct: 145 AIGFSGVIFALKVLTTHEEPSLRATLVGVQIPGKYAAWIELILIHLLVPNSSFMGHLAGI 204
Query: 211 LAGILY 216
LAG++Y
Sbjct: 205 LAGVIY 210
>gi|281342330|gb|EFB17914.1| hypothetical protein PANDA_008422 [Ailuropoda melanoleuca]
Length = 286
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 111/210 (52%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N ++L P + + E + + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNIWLFLNP------LKPLFESCLSVEKCYQQKDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++V ++ + L L +L E + A
Sbjct: 82 YFNMASMLWKGINLERRLGSRWFAYIIVTFSVLTGVVYLFLEFALAESMG-EPGFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G VP R+A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFANVLGFPVPNRFACWAELVAIHFISPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y PL I+ G+ S
Sbjct: 201 VGLMYTH--------GPLKKIMEKCAGISS 222
>gi|170014730|ref|NP_084053.3| rhomboid-related protein 4 [Mus musculus]
gi|170014732|ref|NP_001116157.1| rhomboid-related protein 4 [Mus musculus]
gi|81896101|sp|Q8BHC7.1|RHBL4_MOUSE RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1;
Short=mRHBDD1; AltName: Full=Rhomboid-like protein 4
gi|26325686|dbj|BAC26597.1| unnamed protein product [Mus musculus]
gi|26345628|dbj|BAC36465.1| unnamed protein product [Mus musculus]
gi|26347997|dbj|BAC37647.1| unnamed protein product [Mus musculus]
gi|64213941|gb|AAY41235.1| MSD-50 [Mus musculus]
gi|74209284|dbj|BAE25005.1| unnamed protein product [Mus musculus]
gi|148670185|gb|EDL02132.1| rhomboid domain containing 1, isoform CRA_a [Mus musculus]
gi|148670187|gb|EDL02134.1| rhomboid domain containing 1, isoform CRA_a [Mus musculus]
Length = 315
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P P H + + KD +R LSP +H + HL
Sbjct: 28 PPVTLATLAVNVWFFLNP-----WKPLYHSC-ISVEKCYQQKDWQRLLLSPLHHGDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS F A V+A + G+ LL + V + + A
Sbjct: 82 YFNMVSMLWKGVKLERRLGSRWF-AYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELVAIHFCTPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVL 240
G++Y + PL I+ G+
Sbjct: 201 VGLMYTQ--------GPLKKIMDTCAGIF 221
>gi|12853402|dbj|BAB29735.1| unnamed protein product [Mus musculus]
Length = 315
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P P H + + KD +R LSP +H + HL
Sbjct: 28 PPVTLATLAVNVWFFLNP-----WKPLYHSC-ISVEKCYQQKDWQRLLLSPLHHGDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS F A V+A + G+ LL + V + + A
Sbjct: 82 YFNMVSMLWKGVKLERRLGSRWF-AYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELVAIHFCTPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVL 240
G++Y + PL I+ G+
Sbjct: 201 VGLMYTQ--------GPLKKIMDTCAGIF 221
>gi|13529623|gb|AAH05518.1| Rhomboid domain containing 1 [Mus musculus]
Length = 315
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P P H + + KD +R LSP +H + HL
Sbjct: 28 PPVTLATLAVNVWFFLNP-----WKPLYHSC-ISVEKCYQQKDWQRLLLSPLHHGDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS F A V+A + G+ LL + V + + A
Sbjct: 82 YFNMVSMLWKGVKLERRLGSRWF-AYVIATFSLLTGVVYLLLQFTVAELMNQPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELVAIHFCTPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVL 240
G++Y + PL I+ G+
Sbjct: 201 VGLMYTQ--------GPLKKIMDMCAGIF 221
>gi|148670186|gb|EDL02133.1| rhomboid domain containing 1, isoform CRA_b [Mus musculus]
Length = 296
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P P H + + KD +R LSP +H + HL
Sbjct: 28 PPVTLATLAVNVWFFLNP-----WKPLYHSC-ISVEKCYQQKDWQRLLLSPLHHGDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS F A V+A + G+ LL + V + + A
Sbjct: 82 YFNMVSMLWKGVKLERRLGSRWF-AYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELVAIHFCTPGTSFAGHLAGIL 200
Query: 212 AGILYLK 218
G++Y +
Sbjct: 201 VGLMYTQ 207
>gi|354501643|ref|XP_003512899.1| PREDICTED: rhomboid domain-containing protein 1-like [Cricetulus
griseus]
Length = 307
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 114/210 (54%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L L S V + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNIWFFLNP--LKPLYYSCISV----EKCYQQKDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKGI+LE +G+ FA ++ ++ + L+L +L + + + A
Sbjct: 82 YFNMVSMLWKGIKLERRLGTRWFAYLLTTFSLLTGVVYLVLQFTLAELMN-QPDFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSR-SEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G LVP R A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYFPGGFVNVLGFLVPNRLACWAELVAIHFCTPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y + PL I+ G+ S
Sbjct: 201 VGLMYTQ--------GPLKKIMETCAGIFS 222
>gi|197097614|ref|NP_001125444.1| rhomboid-related protein 4 [Pongo abelii]
gi|75042072|sp|Q5RBS4.1|RHBL4_PONAB RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1; AltName:
Full=Rhomboid-like protein 4
gi|55728068|emb|CAH90786.1| hypothetical protein [Pongo abelii]
Length = 318
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 113/209 (54%), Gaps = 18/209 (8%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A LA N +L P L S S+ + + + +D +R LSP +HA + H
Sbjct: 28 PPVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQRDWQRLLLSPLHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++N S+LWKGI LE +GS FA ++ ++ + LLL ++ F D E +
Sbjct: 81 LYFNTASVLWKGINLERRLGSRWFAYVITTFSVLTGVVYLLLQFAVAEFMD-EPDFKRSC 139
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GH GI
Sbjct: 140 AVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHQAGI 199
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGV 239
L G++Y + PL I+ G+
Sbjct: 200 LVGLMYTQ--------GPLKKIMEACAGL 220
>gi|432103473|gb|ELK30578.1| Rhomboid domain-containing protein 1 [Myotis davidii]
Length = 313
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 110/210 (52%), Gaps = 16/210 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P + ++ + + KD +R LSPF+HA + HL
Sbjct: 28 PPVTLATLAVNIWFFLSP------LKPVYSSCLSVEKCYQEKDWQRLLLSPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKGI LE +GS F A V+ + G+ L + E + A
Sbjct: 82 YFNMVSMLWKGIHLERRLGSRWF-AYVITTFSLLTGVVYLFLEFAFAECMGEPDFKRSCA 140
Query: 153 VGFSGVLFAMKVVLNSR-SEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLF +KV+ N + NV G VP +++ WAEL+ I + PG SF GHL GIL
Sbjct: 141 VGFSGVLFGLKVLNNHYFPGGFVNVLGFPVPHKFSCWAELVAIHLITPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
G++Y+ PL I+ G+ S
Sbjct: 201 VGLMYIH--------GPLKKIMETCAGIFS 222
>gi|340370436|ref|XP_003383752.1| PREDICTED: rhomboid domain-containing protein 1-like [Amphimedon
queenslandica]
Length = 335
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 128/239 (53%), Gaps = 28/239 (11%)
Query: 13 GMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPA--------FLDSLV-PSIHEV 63
G + LL+ H NE+ P T LL N L ++RP F S PS+ E
Sbjct: 25 GFIQLLSSH--NEF------LPTTLVLLGVNVLAFIRPQVGGVRSLRFARSFHWPSVSES 76
Query: 64 WFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALL 123
+ + Y +R FL+PF HA HL+YNM+S +WK LE GS FA M+
Sbjct: 77 CISAKNVWYYGQWERLFLAPFIHADSWHLYYNMISFMWKARTLEKRYGSLYFAYMIAMFT 136
Query: 124 GMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTN-VHGLLVP 182
++ G+ L+L L +FD+ +YY+ AVGFSGV+FA+KV+ ++ + V G+ +P
Sbjct: 137 LLTSGVYLILNVHLAEYFDW--SYYNRCAVGFSGVIFAVKVLTTHLQPNHMSYVFGIGIP 194
Query: 183 ARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
++ A WAEL++I + P SF+GHL GIL G+ ++ S PL I+ G+++
Sbjct: 195 SKLAVWAELLLISVLNPNASFIGHLAGILVGLAFV--------SGPLKMIMDVPWGIVT 245
>gi|348544033|ref|XP_003459486.1| PREDICTED: rhomboid domain-containing protein 1-like [Oreochromis
niloticus]
Length = 323
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 20/212 (9%)
Query: 33 PPVTAALLATNTLIYLRPA--FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PP+T A+LA N +YL PA + V W KD +R LSP +HA +
Sbjct: 28 PPITLAVLALNVYLYLFPAAPLFQACVSVQQAYWL--------KDWRRLLLSPLHHADDW 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM+S LWKG +LE +G F ++ ++ + G+ L+ ++L+ +++Y
Sbjct: 80 HLYFNMVSFLWKGRRLEQRLGGPWFLYLL-SVFSLLTGLVYLVLEALLTELMQDQSYSMA 138
Query: 151 YAVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGVLFA+KV+ N T V GL V +RYA+W EL++I + PG SF+GHL G
Sbjct: 139 CAVGFSGVLFALKVLNNHYYPGSVTYVMGLPVSSRYASWVELVLIHITSPGTSFVGHLSG 198
Query: 210 ILAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
IL G+LY + PL I++ G ++
Sbjct: 199 ILVGLLYT--------TGPLKKIMKKCAGFVT 222
>gi|296490188|tpg|DAA32301.1| TPA: rhomboid domain-containing protein 1 [Bos taurus]
Length = 268
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 114/211 (54%), Gaps = 20/211 (9%)
Query: 33 PPVTAALLATNTLIYLRP--AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A LA N +L P L S + S+ + ++ KD +R LSP +HA +
Sbjct: 28 PPVTLATLALNIWFFLNPLKPLLSSCL-SVEKCYYQ-------KDWQRLLLSPLHHADDW 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM+S+LWKGI LE +GS FA ++V ++ + L L +L F + E +
Sbjct: 80 HLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFALAEFLN-EPDFKRN 138
Query: 151 YAVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGVLFA+KV+ N + NV G V R+A W EL+ I PG SF GHL G
Sbjct: 139 CAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFACWVELLAIHFISPGTSFAGHLAG 198
Query: 210 ILAGILYLKLKGGYSGSDPLTTIIRGATGVL 240
IL G++Y PL I+ TG+
Sbjct: 199 ILVGLMYTH--------GPLKKIMELCTGIF 221
>gi|118151086|ref|NP_001071463.1| rhomboid domain-containing protein 1 [Bos taurus]
gi|115304921|gb|AAI23778.1| Rhomboid domain containing 1 [Bos taurus]
Length = 267
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 33 PPVTAALLATNTLIYLRP--AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A LA N +L P L S + S+ + ++ KD +R LSP +HA +
Sbjct: 28 PPVTLATLALNIWFFLNPLKPLLSSCL-SVEKCYYQ-------KDWQRLLLSPLHHADDW 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM+S+LWKGI LE +GS FA ++V ++ + L L +L F + E +
Sbjct: 80 HLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFALAEFLN-EPDFKRN 138
Query: 151 YAVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGVLFA+KV+ N + NV G V R+A W EL+ I PG SF GHL G
Sbjct: 139 CAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFACWVELLAIHFISPGTSFAGHLAG 198
Query: 210 ILAGILYLKLKGGYSGSDPLTTIIRGATGV 239
IL G++Y PL I+ TG+
Sbjct: 199 ILVGLMYTH--------GPLKKIMELCTGI 220
>gi|115620361|ref|XP_780455.2| PREDICTED: rhomboid domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 349
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 7/192 (3%)
Query: 33 PPVTAALLATNTLIYLR--PAFLDSLV--PSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
PPVT A + N LIYLR ++ +++ PSI + + + D R FL+ ++H
Sbjct: 33 PPVTLATIVANVLIYLRVLNPYIKTVIRSPSIQNICVSSAHVWYKGDWPRLFLAAWFHLD 92
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
+ HL++NM+S +WKGI LE GS FA ++V ++ G+ + L L + + ++
Sbjct: 93 DFHLYFNMVSFVWKGISLERKFGSPYFAYLIVVFCFLTNGLLVALNVGLAELLE-DSSHI 151
Query: 149 SEYAVGFSGVLFAMKVVLNSRSEDYTN-VHGLL-VPARYAAWAELIIIQMFVPGVSFLGH 206
A GFSGVLFA+KV+ + + + + GL VP+R+A W EL++IQ+ VP SF GH
Sbjct: 152 VSCAAGFSGVLFALKVLTTTYTPVQSQRIMGLFSVPSRWACWVELVLIQLIVPRASFTGH 211
Query: 207 LGGILAGILYLK 218
L GIL G+ Y+K
Sbjct: 212 LAGILVGLAYVK 223
>gi|344257225|gb|EGW13329.1| Rhomboid domain-containing protein 1 [Cricetulus griseus]
Length = 298
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 118/226 (52%), Gaps = 19/226 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L L S V + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLALNIWFFLNP--LKPLYYSCISV----EKCYQQKDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKGI+LE +G+ FA ++ ++ + L+L +L + + + A
Sbjct: 82 YFNMVSMLWKGIKLERRLGTRWFAYLLTTFSLLTGVVYLVLQFTLAELMN-QPDFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSR-SEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + NV G LVP R A WAEL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYFPGGFVNVLGFLVPNRLACWAELVAIHFCTPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIY 257
G++Y + PL I+ G + Y RPR Y
Sbjct: 201 VGLMYTQ--------GPLKKIMETCAGPSGYQ---NHYPDGRPRAY 235
>gi|355716387|gb|AES05595.1| rhomboid domain containing 1 [Mustela putorius furo]
Length = 294
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 111/217 (51%), Gaps = 23/217 (10%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A L N +L P + + E + + KD +R LSP +HA + HL
Sbjct: 28 PPVTLATLVLNIWFFLNP------LKPLFESCLSVEKCYQQKDWQRLLLSPLHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS FA ++V ++ + L L +L F D E + A
Sbjct: 82 YFNMASMLWKGIHLERRLGSRWFAYVIVTFSLLTGVLYLFLEFALAEFLD-EPDFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGL-------LVPARYAAWAELIIIQMFVPGVSFL 204
VGFSGVLFA+KV+ N + N+ G VP R A WAEL+ I PG SF
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFANILGFPVPNRLACVPNRLACWAELLAIHFLSPGTSFA 200
Query: 205 GHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
GHL GIL G++Y PL I++ G+ S
Sbjct: 201 GHLAGILVGLMYTH--------GPLKKIMKKCAGIFS 229
>gi|62955205|ref|NP_001017614.1| rhomboid domain-containing protein 1 [Danio rerio]
gi|62204835|gb|AAH92835.1| Zgc:110266 [Danio rerio]
Length = 335
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 12/187 (6%)
Query: 33 PPVTAALLATNTLIYLRP--AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A L N ++L P L++ + S+ E ++ Y+D R LSPF+H +
Sbjct: 28 PPVTLATLGLNVYLFLFPFKPLLETCL-SVREAYW-------YRDWSRLLLSPFHHVDDM 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM LLWKGI+LE +G FA + +++ + G LL ++ + + +Y +
Sbjct: 80 HLYFNMALLLWKGIRLEKKLGGPWFAYL-LSVFSLLTGFVYLLLETGLTHMTEDSSYSLQ 138
Query: 151 YAVGFSGVLFAMKVVLNS-RSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGVLF +KVV N TN+ GL + RYA W EL++I + PG SF+GHL G
Sbjct: 139 CAVGFSGVLFGLKVVNNHYHPGGATNIMGLPIANRYACWVELVLIHIMNPGTSFVGHLSG 198
Query: 210 ILAGILY 216
IL G+LY
Sbjct: 199 ILVGLLY 205
>gi|443690109|gb|ELT92325.1| hypothetical protein CAPTEDRAFT_180450 [Capitella teleta]
Length = 356
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 112/191 (58%), Gaps = 11/191 (5%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT +A I+LR + IHEV + + D KR FL+ FYH E HL
Sbjct: 27 PPVTLGAIAAQVAIFLR--LVKLPFGDIHEVCVSSLNVWYRGDWKRLFLASFYHLDEWHL 84
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITL---LLAKSLVLFFDYERAYYS 149
++NM+S+LWKG+ LE +GS FA MV+ ++ I + ++A+ ++ ++ +Y S
Sbjct: 85 YFNMVSMLWKGVNLERRLGSAYFAYMVLVFSVLTNAILVGLGVIAEEIL----HDHSYIS 140
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELIIIQMFVPGVSFLGHL 207
A GFSGVLFA+KVV S T ++P +R A WAEL++I + VP SF+GHL
Sbjct: 141 TCAAGFSGVLFALKVVAAHLSPPTTQYVMNIIPVNSRLACWAELLLIHILVPNSSFVGHL 200
Query: 208 GGILAGILYLK 218
GIL G+LY+K
Sbjct: 201 AGILVGLLYIK 211
>gi|67846060|ref|NP_001020062.1| rhomboid-related protein 4 [Rattus norvegicus]
gi|81908697|sp|Q4V8F3.1|RHBL4_RAT RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1;
Short=rRHBDD1; AltName: Full=Rhomboid-like protein 4
gi|66910605|gb|AAH97416.1| Rhomboid domain containing 1 [Rattus norvegicus]
Length = 316
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P P H + + D +R LSP +H + HL
Sbjct: 28 PPVTLATLAVNVWFFLNP-----WKPLYHSC-ISVEKCYQQNDWQRLLLSPVHHGDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+S+LWKG++LE +GS F A ++A + G+ LL + + + A
Sbjct: 82 YFNMVSMLWKGVKLEKRLGSRWF-AYIIATFSLLTGVVYLLLQFASAELMNQPDFKRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + N+ G VP R+A WAEL I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELAAIHFCTPGTSFAGHLAGIL 200
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVL 240
G++Y + PL I+ G+
Sbjct: 201 VGLMYTQ--------GPLKKIMDACAGIF 221
>gi|327267037|ref|XP_003218309.1| PREDICTED: rhomboid domain-containing protein 1-like [Anolis
carolinensis]
Length = 317
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 121/218 (55%), Gaps = 18/218 (8%)
Query: 33 PPVTAALLATNTLIYLRP-AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PP+T A LA N ++L+P L+ + S+ E ++ +D R +LS F+HA + H
Sbjct: 31 PPITFATLAVNIYLFLQPLKPLEEVCISVSEGFYR-------RDWHRLYLSAFHHADDWH 83
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM+SLLWKGI+LE +GS F ++ L + GI ++ + + ++
Sbjct: 84 LYFNMVSLLWKGIKLERRLGSMWF-GYIITLFSVLVGIVYMILEFTLAELLENPSFIQSC 142
Query: 152 AVGFSGVLFAMKVVLN-SRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N +++ G+ V +YA W ELI I + PG SF GHL GI
Sbjct: 143 AVGFSGVLFALKVLNNYYHPGGSSSLMGIYVSNKYACWVELIAIHLLSPGSSFAGHLAGI 202
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFAR 248
L G++Y PL TI++ G +P F++
Sbjct: 203 LVGLMYTM--------GPLKTIMKACAGGFIFPTVFSQ 232
>gi|307103357|gb|EFN51618.1| hypothetical protein CHLNCDRAFT_55006 [Chlorella variabilis]
Length = 326
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 112/211 (53%), Gaps = 21/211 (9%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
RL KPP+T L+ +L+P + VPSI + P IL R SPF HA
Sbjct: 58 RLERKPPITILLVVAQVFFFLQPEGFE-WVPSIRQGCLLPRSILS-GQWGRLLWSPFLHA 115
Query: 88 SESHLFYNMMSLLWK-------------GIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
HL+YNM SLLWK G QLE +GS + A+V L +S + + LA
Sbjct: 116 DNLHLYYNMTSLLWKASQQLGAGRCCFWGSQLEPRLGSAAYGALVAELALVSNALYMGLA 175
Query: 135 KSLVLFFD-YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR-----YAAW 188
L + AVGFSGVLF MKVVLN S ++ ++G+ +P + YA W
Sbjct: 176 ALLARHAPALGWSLMHACAVGFSGVLFGMKVVLNHNSPGWSEIYGIALPTKASASMYACW 235
Query: 189 AELIIIQMFVPGVSFLGHLGGILAGILYLKL 219
AEL+++Q+ VP SF GHL GILAG+L++ L
Sbjct: 236 AELLVMQLLVPEASFWGHLCGILAGLLHVLL 266
>gi|326925844|ref|XP_003209118.1| PREDICTED: rhomboid domain-containing protein 1-like [Meleagris
gallopavo]
Length = 317
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 29/290 (10%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
M+R G RV+ G+L L L+ ++ L P VT A+L N +L P V +
Sbjct: 1 MQRRQG--RVNAGLL--LLLYQISQVG-LQNIPSVTLAVLVLNVFFFLNP------VRPL 49
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
HE + ++ +R LSP +H + HL+YNM+S+LWKGI LE +GS F A ++
Sbjct: 50 HEACISVREAFYRQNWQRLLLSPVHHVDDWHLYYNMISMLWKGIMLERRVGSVWF-AYII 108
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGL 179
A+ + GI +L + +++ + +Y AVGFSGVLFA+KV+ N + ++V GL
Sbjct: 109 AVFSVLTGIVYVLLELMLVKILNDPSYEMSCAVGFSGVLFALKVLNNHYNPGRVSSVLGL 168
Query: 180 LVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGV 239
+ ++YA W EL+ I PG SF GHL GIL G++Y PL I++ G
Sbjct: 169 QISSKYACWVELVAIHFISPGTSFAGHLAGILVGLMYTM--------GPLKKIMKACAGG 220
Query: 240 LSWPLRFARYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLS 289
S F RPR Y G S+ R +R P D +G L+
Sbjct: 221 FS---SFTDS--GRPRNYYSGY---SEYYRYPDDQYRTPRNYHDYTGGLT 262
>gi|449278548|gb|EMC86359.1| Rhomboid domain-containing protein 1 [Columba livia]
Length = 220
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 132/239 (55%), Gaps = 21/239 (8%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
M+R G RVS G+L L L+ ++ L P VT +LA N ++L P V +
Sbjct: 1 MQRRQG--RVSAGLL--LLLYQISQV-GLQNIPSVTLGVLALNIFLFLNP------VRPL 49
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
HEV + + ++ +R LSP +HA + HL+YNM+S+LWKGI LE + S F A ++
Sbjct: 50 HEVCISVNEGFYKRNWQRLLLSPVHHADDWHLYYNMVSMLWKGIMLEKKLKSVWF-AYII 108
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGL 179
A+ + G+ ++ + +++ + +Y AVGFSGVLFA+KV+ N + ++V GL
Sbjct: 109 AVFSVLIGVVYMMLEFMLVEILDDPSYEMNCAVGFSGVLFALKVLNNHYNPGRVSSVLGL 168
Query: 180 LVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATG 238
+ ++YA W EL+ I PG SF GHL GIL G++Y PL I+R G
Sbjct: 169 PIASKYACWVELVAIHFISPGTSFAGHLAGILVGLMY--------TMGPLKKIMRACAG 219
>gi|410910522|ref|XP_003968739.1| PREDICTED: rhomboid-related protein 4-like [Takifugu rubripes]
Length = 321
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 147/315 (46%), Gaps = 43/315 (13%)
Query: 33 PPVTAALLATNTLIYLRPA--FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A+L N ++L PA + + V WF K+ R LSP +HA +
Sbjct: 28 PPVTLAVLGLNVYLFLFPAAPLMQACVSVQQAYWF--------KEWHRLLLSPLHHADDF 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM+S LWKG++LE +G F ++ ++ + G+ L ++L+ +++Y +
Sbjct: 80 HLYFNMVSFLWKGVRLERRLGGAWFLYLL-SVFSLLTGVVYLALETLLAELTQDQSYNMQ 138
Query: 151 YAVGFSGVLFAMKVVLNSRSEDYTN-VHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGVLFA+KV+ N T V GL + RYA+W EL++I + PG S +GHL G
Sbjct: 139 CAVGFSGVLFALKVINNHYYPGGTTYVMGLPISNRYASWVELVLIHITAPGTSLIGHLSG 198
Query: 210 ILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGTVG-----G 264
I+ G+LY PL TI++ G ++ + YG GT G G
Sbjct: 199 IVVGLLYT--------VGPLKTIMKRCAGFVT-----SNGYTHAGANYGSGTSGYSTGYG 245
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIP--------- 315
R P +G L+ E + N L + H P
Sbjct: 246 GHPRHQQNAPNYAPNPNESYTGGLTEEEQIEAAIR-NSLYDRGQTNHRGAPPPYGFSSPE 304
Query: 316 ---LEELRHRRIERF 327
EE+R RR+ RF
Sbjct: 305 EAIAEEIRQRRLRRF 319
>gi|197304727|ref|NP_001127873.1| rhomboid domain containing 1 [Nasonia vitripennis]
Length = 246
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 121/220 (55%), Gaps = 9/220 (4%)
Query: 15 LPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYK 74
L LLA A N + PP T +A +L+Y A + + + +V + ILK+K
Sbjct: 15 LVLLASQAMN--FGIDKIPPATLLGMAVQSLLY---AGMIKVPWNPEDVCISTLKILKHK 69
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL-LGMSQGITLLL 133
D + F +S F H S+ HL+YNM+S L KG LE G+ FA ++ L LG S L
Sbjct: 70 DWRSFVVSNFEHGSDMHLYYNMVSFLLKGSYLEPMYGTANFALLIGLLSLGCSSMYVFLG 129
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDY-TNVHGLLVPARYAAWAELI 192
+ DY AYY+ A+GFS VLFA+KV++ D T+V G VP+++A WAEL+
Sbjct: 130 YALTQITTDY--AYYTSCAIGFSAVLFALKVIVVCEEHDRPTDVGGFRVPSKFAVWAELV 187
Query: 193 IIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTI 232
+I + VP SF+GHLGGIL G LY G L+TI
Sbjct: 188 LIHLLVPNSSFIGHLGGILVGCLYCYTFVGEIVDSKLSTI 227
>gi|440796367|gb|ELR17476.1| peptidase, S54 (rhomboid) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 293
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 114/187 (60%), Gaps = 7/187 (3%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT + A N L++ ++D+ + SI++V ++ DL+R L+ F+H + HL
Sbjct: 27 PPVTLIVGAINVLLH----YVDTRL-SIYDVCIGAGMVWHRLDLRRLLLASFFHLDDMHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+YNM+SLLWKG LE MGS FA +VV L + + +++ L+ F Y+ A
Sbjct: 82 YYNMVSLLWKGRDLEPRMGSKRFATLVV-LFALVSNMLMVVGSVLLDRFADMPGPYNSCA 140
Query: 153 VGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFS VLFA+KVV S Y++ G+LVP +Y W EL++I + VPG SF GHL GIL
Sbjct: 141 VGFSAVLFALKVVTTHYSTSPYSHFMGMLVPTQYLYWFELVLIHLLVPGSSFFGHLCGIL 200
Query: 212 AGILYLK 218
GILY+K
Sbjct: 201 TGILYVK 207
>gi|213512430|ref|NP_001133781.1| Rhomboid domain-containing protein 1 [Salmo salar]
gi|209155312|gb|ACI33888.1| Rhomboid domain-containing protein 1 [Salmo salar]
gi|209734730|gb|ACI68234.1| Rhomboid domain-containing protein 1 [Salmo salar]
Length = 313
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 18/208 (8%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A+L N ++L P L S+ + ++ D +R LSP +H + H
Sbjct: 29 PPVTLAVLGLNVYLFLVPNLPLLQACISVQQAYWR-------GDWRRLVLSPLHHLDDWH 81
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM S LWKG++LE +GS+ F A ++A+ + G+ LL + ++ + +Y +
Sbjct: 82 LYFNMASFLWKGVKLEPRLGSS-FYAWLLAVFSLLTGVIYLLLEMVLSEITQDPSYSMQC 140
Query: 152 AVGFSGVLFAMKVVLNS-RSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + V G+ V RYA+W EL++I + PG SF+GHL GI
Sbjct: 141 AVGFSGVLFALKVLSNHYHPGGVSYVMGVPVANRYASWVELVLIHLTSPGTSFVGHLAGI 200
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATG 238
L G+LY + PL I+R G
Sbjct: 201 LVGLLYT--------AGPLKIIMRTIAG 220
>gi|383847955|ref|XP_003699618.1| PREDICTED: rhomboid domain-containing protein 1-like [Megachile
rotundata]
Length = 247
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 112/202 (55%), Gaps = 9/202 (4%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDL 76
LL L A N + PP T + L+Y+ L + + EV + I KY+D
Sbjct: 17 LLCLQAIN--FGIDKIPPATLTSIILQVLLYIG---LIKVPWNAEEVCISTIKIFKYRDW 71
Query: 77 KRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL-LGMSQGITLLLAK 135
K F +S F H S+ HL+YNM+SL+ KG LE G+ F ++ L G S T L
Sbjct: 72 KSFIISNFEHGSDMHLYYNMVSLILKGSYLEPMYGTMNFVILLAVLSFGCSAMYTSLGYA 131
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLLVPARYAAWAELIII 194
+ L DY YY++ A+GFS VLFA+KV++ +D +V GL VP++ A W ELI+I
Sbjct: 132 LMQLTGDY--GYYTQCAIGFSAVLFALKVIVVCEEQDRIHDVGGLRVPSKIAVWVELILI 189
Query: 195 QMFVPGVSFLGHLGGILAGILY 216
+ VP SF+GHLGGIL G LY
Sbjct: 190 HLLVPQSSFVGHLGGILVGCLY 211
>gi|302837730|ref|XP_002950424.1| hypothetical protein VOLCADRAFT_117545 [Volvox carteri f.
nagariensis]
gi|300264429|gb|EFJ48625.1| hypothetical protein VOLCADRAFT_117545 [Volvox carteri f.
nagariensis]
Length = 353
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H E HL++NM SL+WKGI LE G FA +V +L +S G+ +L+ L
Sbjct: 84 RLITSGFLHMDEWHLYFNMSSLVWKGIHLERRYGHKLFALLVAEMLLLSHGLYVLVTLLL 143
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
++ YY ++AVGFS VLF +K +L + Y + G+ VP +YA WAEL++I +
Sbjct: 144 CSVSEHRHIYYHQHAVGFSAVLFGLKTILMYNTPGYDEIFGVRVPTKYACWAELVLIWVL 203
Query: 198 VPGVSFLGHLGGILAGILYLK 218
VP SF+GHL GILAG L+ +
Sbjct: 204 VPKSSFIGHLCGILAGGLHAQ 224
>gi|50752018|ref|XP_422616.1| PREDICTED: rhomboid domain-containing protein 1 [Gallus gallus]
Length = 317
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 29/290 (10%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
M+R G RV+ G+L L L+ ++ L P VT A+L N +L P + +
Sbjct: 1 MQRRQG--RVNAGLL--LLLYQISQVG-LQNIPSVTLAVLILNVFFFLNP------MRPL 49
Query: 61 HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
HE + ++ +R LSP +H + HL+YNM+S+LWKGI LE +GS F A ++
Sbjct: 50 HEACISVKEAFYRQNWQRLLLSPVHHVDDWHLYYNMVSMLWKGITLERKLGSMWF-AYII 108
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGL 179
A+ + GI +L + +++ + +Y AVGFSGVLFA+KV+ N + ++V GL
Sbjct: 109 AVFSVLTGIVYVLLEFMLVKILNDPSYEMSCAVGFSGVLFALKVLNNHYNPGRVSSVLGL 168
Query: 180 LVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGV 239
+ ++YA W EL+ I P SF GHL GIL G++Y PL I++ G
Sbjct: 169 QISSKYACWVELVAIHFIAPRTSFAGHLAGILVGLMYTM--------GPLKKIMKACAGG 220
Query: 240 LSWPLRFARYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLS 289
S FA RPR G S+ R +R P ++ +G L+
Sbjct: 221 FS---SFADP--DRPR---NDYSGYSEYYRYPDDQYRTPNNYYEYTGGLT 262
>gi|260796227|ref|XP_002593106.1| hypothetical protein BRAFLDRAFT_120182 [Branchiostoma floridae]
gi|229278330|gb|EEN49117.1| hypothetical protein BRAFLDRAFT_120182 [Branchiostoma floridae]
Length = 297
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 16/186 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N ++LR F P + E W KR + F+HA E HL
Sbjct: 32 PPVTLATLAANVAMFLR-LFRGFRYPKLGEDW------------KRLIYAAFFHADEWHL 78
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+YNM S +WKGI LE MGS F ++ + + L L S+ FF ++ +Y ++ A
Sbjct: 79 YYNMASFMWKGITLERRMGSVRFLYVLAVFTVCTHSLLLGLNYSMDHFF-HQSSYLADCA 137
Query: 153 VGFSGVLFAMKVVLNSR-SEDYTNVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
VGFSGV+FA+KV+ T V G VP R A W EL++IQ+ +P SF+GHL GI
Sbjct: 138 VGFSGVIFALKVLTTHYLPPGMTYVMGWFPVPRRIACWVELVVIQILIPRASFMGHLSGI 197
Query: 211 LAGILY 216
L G+LY
Sbjct: 198 LVGLLY 203
>gi|322802448|gb|EFZ22798.1| hypothetical protein SINV_10941 [Solenopsis invicta]
Length = 247
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 5/185 (2%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PP T + TL+Y A L + + EV + I+KYKD + FFLS F H S+ HL
Sbjct: 31 PPATLIGVIAQTLLY---AGLIRVPWNAEEVCISAVKIIKYKDWRSFFLSNFEHGSDMHL 87
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+YNM+S + KG LE G+ F +++A+L + + +++ + Y++ A
Sbjct: 88 YYNMISFILKGSYLEPLYGTTNFV-LLLAILSFGCSVMYVSLGYILMQLTGDYGYFTACA 146
Query: 153 VGFSGVLFAMKVV-LNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
+GFS LFA+KVV L + N+ G +VP++ A W ELI+I + VP SF+GHLGGIL
Sbjct: 147 IGFSATLFALKVVALCEERDKLHNISGFIVPSKLAVWFELILIHLLVPNSSFIGHLGGIL 206
Query: 212 AGILY 216
G LY
Sbjct: 207 VGCLY 211
>gi|387018080|gb|AFJ51158.1| Rhomboid domain-containing protein 1-like [Crotalus adamanteus]
Length = 310
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 113/202 (55%), Gaps = 17/202 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT LA N +L+P + + + + + L KD R +LS F+HA + HL
Sbjct: 28 PPVTLGTLAVNIFFFLQP------LKPLDKACISVNYCLYKKDWHRLYLSAFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+SLLWKGI+LE+ +G+ F ++AL + G + ++++ +Y A
Sbjct: 82 YFNMVSLLWKGIKLESRLGTMWF-GYIIALFSLLVGAVYIFLEAVLAELLGNPSYEHHCA 140
Query: 153 VGFSGVLFAMKVVLN-SRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N TN+ GL V +Y+ W EL+ I + P SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNYYHPGGSTNIMGLNVSNKYSCWLELLAIHLLNPQSSFAGHLAGIL 200
Query: 212 AGILY----LKL-----KGGYS 224
G++Y LK+ GGYS
Sbjct: 201 VGLMYTMGPLKMFMTACAGGYS 222
>gi|332024419|gb|EGI64617.1| Rhomboid domain-containing protein 1 [Acromyrmex echinatior]
Length = 246
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 9/202 (4%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDL 76
LL + A N L PP T + TL+Y+ L + + +V + I+KYK+
Sbjct: 16 LLCMQALN--FGLDKIPPATLIGIIAQTLLYMG---LIRVSWNAEDVCISAIKIIKYKNW 70
Query: 77 KRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL-LGMSQGITLLLAK 135
+ FFLS F H S+ HL+YNM+S + KG LE G+ F ++ L +G S L
Sbjct: 71 RSFFLSNFEHGSDMHLYYNMLSFILKGSYLEPIYGTMNFVLLLGVLSIGCSAMYVFLGYI 130
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAMKVV-LNSRSEDYTNVHGLLVPARYAAWAELIII 194
+ L DY Y++ A+GFS LFA+KV+ L + N++GL+VP++ A W ELI+I
Sbjct: 131 LMQLTGDY--GYFTACAIGFSATLFALKVIALCEERDKLQNINGLIVPSKIAVWLELILI 188
Query: 195 QMFVPGVSFLGHLGGILAGILY 216
+ VP SF+GHLGGIL G LY
Sbjct: 189 HLLVPNSSFIGHLGGILVGCLY 210
>gi|291235069|ref|XP_002737468.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 414
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A L NT+IYLR VPSI V + + + R L+ ++H S+ HL
Sbjct: 36 PPVTLASLVANTVIYLRIL----QVPSIQTVCVSAVKVWHQHEWSRLLLASWFHTSDMHL 91
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S LWKG+ LE +GS FA M+ ++ + + L F + +Y A
Sbjct: 92 YFNMASFLWKGMSLERKLGSKYFAYMIAVFSVLTSSLLVCLDILASEVFG-DASYLYSCA 150
Query: 153 VGFSGVLFAMKVVLNSRSEDYTN-VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
VGFS V+F++K+V T + GL+ V +R A W EL++IQ+ VP VSF GHL GI
Sbjct: 151 VGFSAVIFSIKMVTTYSMAPGTQWIMGLIPVHSRIACWVELVLIQVLVPNVSFTGHLAGI 210
Query: 211 LAGILYLK 218
L G+ Y+K
Sbjct: 211 LVGLAYVK 218
>gi|47221041|emb|CAG12735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 149/339 (43%), Gaps = 69/339 (20%)
Query: 33 PPVTAALLATNTLIYLRPA--FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT A+L N +YL PA + + V WF K+ R LSP +HA +
Sbjct: 28 PPVTLAVLGLNVYLYLFPAAPLMQACVSVQRAYWF--------KEWHRLLLSPLHHADDF 79
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL++NM S LWKGI+LE +G F ++ ++ + G+ L+ ++L+ +++Y +
Sbjct: 80 HLYFNMASFLWKGIRLERRLGGAWFLYLL-SVFSVLTGVVYLVLETLLAELTQDQSYSMQ 138
Query: 151 YAVGFSG------------------------VLFAMKVVLNS-RSEDYTNVHGLLVPARY 185
AVGFSG VLFA+KV+ N T V GL V RY
Sbjct: 139 CAVGFSGILRNLNCNVYNGYLYIFLFFLFRGVLFALKVLSNHYHPGGVTYVMGLPVSNRY 198
Query: 186 AAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLR 245
A+W EL++I + PG S +GHL GI+ G+LY PL TI++ G ++
Sbjct: 199 ASWVELVLIHITAPGTSLIGHLSGIVVGLLYT--------VGPLKTIMKTCAGFITSD-- 248
Query: 246 FARYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDN-----SGWLSICEMCGTSRSG 300
Y R YG GT G D P + P N +G L+ E +
Sbjct: 249 --GYAHTRA-TYGSGTSGYDDGYGRYPRYQQYPLNRARNPTESYTGGLTEEEQIEAAIQN 305
Query: 301 NDLSSDQLSRHSNIP------------LEELRHRRIERF 327
S + H P EE+R RR+ RF
Sbjct: 306 ---SLNDGGNHRGAPPAYGFHFPEEAIAEEIRQRRLRRF 341
>gi|156351056|ref|XP_001622342.1| predicted protein [Nematostella vectensis]
gi|156208856|gb|EDO30242.1| predicted protein [Nematostella vectensis]
Length = 321
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 23/224 (10%)
Query: 2 ERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFL-----DSL 56
RG GG + L L L+ F ++R+P PVT + +A N IYLR D+
Sbjct: 3 RRGRGGLGI---FLLLAQLYNFG-FNRIP---PVTLSFIAGNAAIYLRLLPNLPRLRDAC 55
Query: 57 VPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA 116
V S + VW+ Y D R L+PF+H + HL+YNM S LWKG LET +GS F
Sbjct: 56 V-SANHVWY-------YGDWLRLALAPFFHLDDWHLYYNMASFLWKGKSLETKLGSGMFL 107
Query: 117 AMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSR-SEDYTN 175
++ A+ + + L+ + + +Y A GFSGV+FA+KV+ +
Sbjct: 108 YLL-AVFSVLTSVVLVGLDIFLANVTGDSSYLYSCAAGFSGVIFALKVLTTYELPSGVSM 166
Query: 176 VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLK 218
V G+ +P RYA WAELI+IQ+ VP SF GHL GI+ G+LY+K
Sbjct: 167 VMGMFPIPVRYACWAELILIQLMVPNASFTGHLAGIIVGLLYVK 210
>gi|431917916|gb|ELK17145.1| Rhomboid domain-containing protein 1 [Pteropus alecto]
Length = 189
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 97/169 (57%), Gaps = 8/169 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA NT +L P L L S V + KD +R LSPF+HA + HL
Sbjct: 28 PPVTLAALALNTWFFLSP--LKPLYGSCLSV----EKCFQQKDWQRLLLSPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM+SLLWKGI LE +GS FA ++ ++ + L L + F D E ++ A
Sbjct: 82 YFNMVSLLWKGINLERRLGSKWFAYVIATFSLLTGVVYLFLELAFAEFMD-EPSFRMNCA 140
Query: 153 VGFSGVLFAMKVVLNSR-SEDYTNVHGLLVPARYAAWAELIIIQMFVPG 200
VGFSGVLFA+KV+ N + +V G VP ++A WAEL+ I + VPG
Sbjct: 141 VGFSGVLFALKVLNNHYFPGGFVSVMGFPVPNKFACWAELVAIHLMVPG 189
>gi|348676100|gb|EGZ15918.1| hypothetical protein PHYSODRAFT_507191 [Phytophthora sojae]
Length = 326
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 147/315 (46%), Gaps = 19/315 (6%)
Query: 18 LALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW-FNPHLILKYKDL 76
L L + +L KPPVT L+A I+ F + P + + P +L D
Sbjct: 26 LMLMLVRQVQQLERKPPVTLGLMALMYGIH----FQKNQTPQLFAPYSLCPDRVLSNWDW 81
Query: 77 KRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKS 136
+R S H + HL++NM+S LWKG LE +GS F V LL + + +++A
Sbjct: 82 ERIVASGLIHVDDWHLYHNMISFLWKGYNLEYKLGSVRFLLTVGYLLVLCHVLVVVVALV 141
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDY-TNVHGLLVPARYAAWAELIIIQ 195
L F A + +VGFSGVLFA+KV+LN S + ++V+G VP +Y AW EL++I
Sbjct: 142 LATGFQMP-APLHQCSVGFSGVLFALKVLLNHNSPAFFSSVYGFQVPTKYTAWLELVVIH 200
Query: 196 MFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPR 255
VP SF+GH+ GILAG +++ S + GA V W A + R
Sbjct: 201 FLVPRSSFMGHMCGILAGYIFVDSPSMQSA------MTSGARVVSRWMRSLAGPISSRSE 254
Query: 256 IYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSR--HSN 313
R +R + + PA F+ L+ + D+++ Q +
Sbjct: 255 HDTRCAAPAHSSRSSTSM----PAQRFETDEQLARRLQEEEYQRAQDIAAPQREQPLPER 310
Query: 314 IPLEELRHRRIERFG 328
I ELR RR+ RFG
Sbjct: 311 ISPSELRRRRLARFG 325
>gi|348676094|gb|EGZ15912.1| hypothetical protein PHYSODRAFT_334115 [Phytophthora sojae]
Length = 275
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 15/233 (6%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDL 76
++ L++ E R KPPVT AL+A L++++ SL + P ++ K++
Sbjct: 35 MMVLNSVQEMDR---KPPVTIALIAVMYLLHVQATRTPSL---LRPFALCPGKVVANKEI 88
Query: 77 KRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKS 136
F+SPF H + HL+ +++S LWKG +LE +GS F ++V L+ ++Q L++A +
Sbjct: 89 AAVFISPFIHWEDLHLYQSILSFLWKGYKLEGRLGSIGFCVLLVYLIVLTQA--LIVAGA 146
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
V+ + E GFSGVL A+KV+LN S +T ++ VP +YAAW EL+I +
Sbjct: 147 HVISW----GAMQECITGFSGVLTAIKVILNVNSPAFTKLYSFKVPTKYAAWLELVITYL 202
Query: 197 FVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRG---ATGVLSWPLRF 246
VP + L G++AG +Y+ D + ++ G++ PL++
Sbjct: 203 LVPKLPILAQAAGLIAGYVYVVTPNAQGIVDCVAQQVQQLLIRAGIMKRPLQW 255
>gi|321459244|gb|EFX70299.1| hypothetical protein DAPPUDRAFT_300486 [Daphnia pulex]
Length = 312
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 152/317 (47%), Gaps = 57/317 (17%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHE---VWFNPHLILKYKDLKRFFLSPFYHASE 89
PPVT ++A +++ L+P + V + +LK+++ +R LS HA +
Sbjct: 28 PPVTILVVAGQVCLFM------GLIPVSWDAGGVCLSAQAVLKWREYERLVLSALEHADD 81
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQ----GITLLLAKSLVLFFDYER 145
HL+YNM+S L KG LE GS FA ++ ++ G+ +LL++ L +++
Sbjct: 82 LHLYYNMLSFLSKGRSLERHFGSPYFAYLLSVFTVLTSVTYVGLEVLLSELL-----HDK 136
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
+Y A+GFSGV+FA+KV+ S E Y G+ V +YA W ELI IQ+ VP SF+
Sbjct: 137 QHYKTCAIGFSGVIFALKVLTTSYWESGYRRYFGIRVSGKYAVWVELIAIQLMVPNTSFV 196
Query: 205 GHLGGILAGILYLKLKGGYSGSDPLTTIIR---GATGVLSWPLRFARYLFRRPRIY---G 258
GHL GIL G+ Y + PL I+ A G +S P +PR Y G
Sbjct: 197 GHLAGILVGVAYTQ--------GPLKFIMDLPIHAIGFVSGP------QMAQPRSYSDWG 242
Query: 259 RGTVGGSDTRRTAPIIWRCPA----CTFDNSGWLS--ICEMCGTSRSGN--DLSSDQLSR 310
G V G + + WR + +D + S + T R+ N D+ DQ
Sbjct: 243 SG-VSGYGAAQPSTYGWRVGSDINDADYDEAMRRSYETLQNEDTPRTFNPDDMQPDQ--- 298
Query: 311 HSNIPLEELRHRRIERF 327
+E+R RR+ RF
Sbjct: 299 ------DEIRRRRLNRF 309
>gi|242015304|ref|XP_002428304.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512889|gb|EEB15566.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 287
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 9/189 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVP-SIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT + TL+Y+ VP EV + + I+ KD KR FLS H + H
Sbjct: 30 PPVTLGAILGQTLLYMGIIN----VPWEKEEVCISGNSIINDKDWKRLFLSAVEHGDDMH 85
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM S L KG LE GS FA ++ L ++ + ++LA + + +Y
Sbjct: 86 LYFNMASFLIKGRSLEARYGSKNFAIILTFLTIVTSLMYVILAFIMSNVME-ATSYMDSC 144
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVH--GLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
A+GFSGV+FA+KV L + E Y G+ +P +YAAW ELIII M VP SF+GH G
Sbjct: 145 AIGFSGVIFALKV-LTTHEEPYIRAMLLGVDIPGKYAAWVELIIIHMLVPNSSFMGHFAG 203
Query: 210 ILAGILYLK 218
IL+G++Y K
Sbjct: 204 ILSGVIYCK 212
>gi|340725934|ref|XP_003401319.1| PREDICTED: rhomboid domain-containing protein 1-like [Bombus
terrestris]
Length = 247
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 16/239 (6%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDL 76
LL + A N + + PP T + L+Y+ L + + EV + + KY+D
Sbjct: 17 LLCMQALN--YGIDKIPPATLITIIAQVLLYVG---LIKVPWNAEEVCISAIKVFKYRDW 71
Query: 77 KRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL-LGMSQGITLLLAK 135
F +S F H S+ HL+YNM+SL+ KG LE G+ F ++ L G S L
Sbjct: 72 NSFLISNFEHGSDMHLYYNMVSLILKGSYLEPMYGTINFVILLAILSFGCSTMYAGLGYA 131
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIII 194
+ L DY YY++ A+GFS +LFA+KV++ D +V G V ++ A W ELI+I
Sbjct: 132 LMQLTGDY--GYYTQCAIGFSAILFALKVIVVCEEYDRIQDVGGFRVSSKIAVWVELILI 189
Query: 195 QMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRR 253
+ VP SF+GHLGGIL G LY G + + +I G TG P+ +RR
Sbjct: 190 HLLVPQSSFIGHLGGILVGCLYCYTFIG----EIVDNMIYGITGT---PIIHEEQFYRR 241
>gi|159470379|ref|XP_001693337.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277595|gb|EDP03363.1| predicted protein [Chlamydomonas reinhardtii]
Length = 249
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKD- 75
+LAL N+ ++L KPPVT ALLA +++ + P +L Y +
Sbjct: 2 ILALQLANQIYQLENKPPVTLALLAFQVVLFFGRGSGLGGGGLGGLI---PPELLPYMNV 58
Query: 76 -LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
L L P E HLFYNM SLLWKG QLE+ G FAA+V LL +S G+T LLA
Sbjct: 59 QLAAVCLQP-RQILEHHLFYNMGSLLWKGAQLESRYGHWGFAALVAELLLLSHGLTALLA 117
Query: 135 KSLVLFFD-YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+L F Y Y+ AVGFS VLFA+KVVLN +++ G +P +Y WAEL++
Sbjct: 118 AALAAGFPGYRYLYWDTCAVGFSAVLFALKVVLNYNQPGNSSIMGFELPTKYLCWAELVL 177
Query: 194 IQMFVPGVSFLGHLGGILAGILYLKL 219
P F+GHLGGILAG+ +++L
Sbjct: 178 ASYLTPQACFIGHLGGILAGLGHVRL 203
>gi|449509605|ref|XP_002194576.2| PREDICTED: rhomboid-related protein 4 [Taeniopygia guttata]
Length = 314
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 108/185 (58%), Gaps = 8/185 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P VT +L N ++L P + + E + + + K+ +R L+PF+HA + HL
Sbjct: 28 PSVTLGVLVLNIFLFLNP------LRPLSEACLSVNEAVYRKNWQRLLLAPFHHADDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+YNM+S+LWKGI LE + S F A ++A+ + GI ++ + L++ + +Y
Sbjct: 82 YYNMISMLWKGIMLERKLKSIWF-AYIIAVFSVLIGIVYMVLELLLVIILDDPSYEMNCG 140
Query: 153 VGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
VGFSGVLFA+KV+ N + ++V GL + ++YA W EL+ I PG SF GHL GIL
Sbjct: 141 VGFSGVLFALKVLNNHYNPGRVSSVLGLPISSKYACWVELLAIHFISPGTSFAGHLSGIL 200
Query: 212 AGILY 216
G++Y
Sbjct: 201 VGLMY 205
>gi|432891062|ref|XP_004075529.1| PREDICTED: rhomboid-related protein 4-like [Oryzias latipes]
Length = 291
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 10/173 (5%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPVT A++A N +YL PA L S+H+ + +YKD +R LSP +HA + H
Sbjct: 28 PPVTLAVMALNVYLYLFPAAPLMKTCISVHQAY-------RYKDWRRLLLSPVHHADDLH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L++NM+S LWKG++LE +G F + +++ + G L+ + L+ +++Y +
Sbjct: 81 LYFNMVSFLWKGVRLERRLGGAWFLYL-LSVFSLLTGCVYLVLEGLLTELTQDQSYSAAC 139
Query: 152 AVGFSGVLFAMKVVLNS-RSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
AVGFSGVLFA+KV+ N T V G+ V RY +W EL++I + PG SF
Sbjct: 140 AVGFSGVLFALKVLNNHYHPGGVTYVMGIPVSNRYVSWVELVLIHITSPGTSF 192
>gi|348676108|gb|EGZ15926.1| hypothetical protein PHYSODRAFT_459480 [Phytophthora sojae]
Length = 244
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 12/235 (5%)
Query: 15 LPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYK 74
+P + N + KPPVT AL+A L++++ SL + P ++ K
Sbjct: 1 IPPPLMMVLNSVQDMDRKPPVTIALIAVMYLLHVQATRTPSL---LRPFALCPGKVVANK 57
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
++ F+SPF H + HL+ +++S LWKG +LE +GS F ++V L+ ++Q L++A
Sbjct: 58 EIAAVFISPFIHWEDLHLYQSILSFLWKGYKLEGRLGSIGFCVLLVYLIVLTQA--LIVA 115
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
+ V+ + E GFSGVL A+KV+LN S +T ++ VP +YAAW EL+I
Sbjct: 116 GAHVISW----GAMQECITGFSGVLTAIKVILNVNSPAFTKLYSFKVPTKYAAWLELVIT 171
Query: 195 QMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGA---TGVLSWPLRF 246
+ VP + L G++AG +Y+ D + ++ G++ PL++
Sbjct: 172 YLLVPKLPILAQAAGLIAGYVYVVTPNAQGIVDCVAQQVQQLLIRAGIMKRPLQW 226
>gi|324513372|gb|ADY45497.1| Rhomboid domain-containing protein 1 [Ascaris suum]
Length = 331
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 113/207 (54%), Gaps = 12/207 (5%)
Query: 17 LLALHAF-NEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVP-SIHEVWFNPHLILKYK 74
LLA H NEY PPVT + ++L F+ + P E+ P I+ ++
Sbjct: 15 LLAYHLLQNEY-----IPPVTLGAILFQMAVFL--GFVPPIGPWKTREMCLLPSRIIGHR 67
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLL 133
+ R S H + HL+YNM+SLLWKG +LE +GS F ++V + S GI L
Sbjct: 68 EWIRMLASVVMHGDDMHLYYNMISLLWKGRRLERRLGSWRFLLILLVFAVASSCGIVALS 127
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSR--SEDYTNVHGLLVPARYAAWAEL 191
+ +F + A + AVGFSGVLFA+KV+ + ED + + +P+RYA WAEL
Sbjct: 128 VLATDVFHLHYLALMHQCAVGFSGVLFALKVLHTTYFPYEDSMLLGWMPIPSRYACWAEL 187
Query: 192 IIIQMFVPGVSFLGHLGGILAGILYLK 218
++IQ P SF+GHL GIL G+LY K
Sbjct: 188 LLIQFLAPEASFIGHLSGILVGLLYTK 214
>gi|350397339|ref|XP_003484847.1| PREDICTED: rhomboid domain-containing protein 1-like [Bombus
impatiens]
Length = 247
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 120/239 (50%), Gaps = 16/239 (6%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDL 76
LL + A N + + PP T + L+Y+ L + + EV + + KY D
Sbjct: 17 LLCMQALN--YGIDKIPPATLITIIAQVLLYVG---LIKVPWNAEEVCISAIKVFKYHDW 71
Query: 77 KRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL-LGMSQGITLLLAK 135
F +S F H S+ HL+YNM+SL+ KG LE G+ F ++ L G S L
Sbjct: 72 NSFLISNFEHGSDMHLYYNMVSLILKGSYLEPMYGTINFVMLLAILSFGCSTMYAGLGYA 131
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIII 194
+ L DY YY++ A+GFS +LFA+KV++ D +V G V ++ A W ELI+I
Sbjct: 132 LMQLTGDY--GYYTQCAIGFSAILFALKVIVVCEEYDRIQDVGGFRVSSKIAVWVELILI 189
Query: 195 QMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRR 253
+ VP SF+GHLGGIL G LY G + + +I G TG P+ +RR
Sbjct: 190 HLLVPQSSFIGHLGGILVGCLYCYTFIG----EIVDNMIYGITGT---PIIHEEQFYRR 241
>gi|328779994|ref|XP_001122441.2| PREDICTED: rhomboid domain-containing protein 1-like [Apis
mellifera]
Length = 247
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 106/190 (55%), Gaps = 15/190 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVP-SIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PP T + L+Y+ F+ VP + EV + I KY D F +S F H S+ H
Sbjct: 31 PPATLLTIIAQVLLYI--GFIK--VPWNAEEVCISAIKIFKYHDWNSFIISNFEHGSDMH 86
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVAL-LGMSQGITLLLAKSLVLF-FDYERAYYS 149
L+YNM+SL+ KG LE + F ++ L G S T+ + S VL + YY
Sbjct: 87 LYYNMVSLILKGSYLEPMYKTMNFVILLTILSFGCS---TMYIGLSYVLMQLTGDYGYYV 143
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYTNVH---GLLVPARYAAWAELIIIQMFVPGVSFLGH 206
+ A+GFS +LFA+KV++ E+Y +H GL VP++ A W ELI+I + VP SF+GH
Sbjct: 144 QCAIGFSSILFALKVIV--ICEEYDRIHDVGGLRVPSKIAVWVELILIHLLVPQSSFIGH 201
Query: 207 LGGILAGILY 216
LGGIL G LY
Sbjct: 202 LGGILIGCLY 211
>gi|380024431|ref|XP_003695999.1| PREDICTED: rhomboid domain-containing protein 1-like [Apis florea]
Length = 247
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 106/190 (55%), Gaps = 15/190 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVP-SIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PP T + L+Y+ F+ VP + EV + I KY D F +S F H S+ H
Sbjct: 31 PPATLLTIIAQVLLYI--GFIK--VPWNAEEVCISAIKIFKYHDWNSFIISNFEHGSDMH 86
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVAL-LGMSQGITLLLAKSLVLF-FDYERAYYS 149
L+YNM+SL+ KG LE + F ++ L G S T+ + S VL + YY
Sbjct: 87 LYYNMVSLILKGSYLEPMYKTMNFIILLTILSFGCS---TMYIGLSYVLMQLTGDYGYYV 143
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYTNVH---GLLVPARYAAWAELIIIQMFVPGVSFLGH 206
+ A+GFS +LFA+KV++ E+Y +H GL VP++ A W ELI+I + VP SF+GH
Sbjct: 144 QCAIGFSAILFALKVIV--ICEEYDKIHDIGGLRVPSKIAVWVELILIHLLVPQSSFIGH 201
Query: 207 LGGILAGILY 216
LGGIL G LY
Sbjct: 202 LGGILIGCLY 211
>gi|307213224|gb|EFN88719.1| Rhomboid domain-containing protein 1 [Harpegnathos saltator]
Length = 247
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 7/186 (3%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PP T + + TL+Y+ L + + EV + I KYK+ + FF S F H S+ HL
Sbjct: 31 PPATLIGVISQTLLYIG---LIKVPWNAEEVCISAVKIFKYKNWRSFFFSNFEHGSDMHL 87
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV-LFFDYERAYYSEY 151
+YNM+S + KG LE G+ F ++ L + + L L+ L DY YY+
Sbjct: 88 YYNMISFILKGSYLEPIYGTMNFVLLLFILSTGCSAMYVSLGYILMQLTGDY--GYYTTC 145
Query: 152 AVGFSGVLFAMKVV-LNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
A+GFS LFA+KV+ L + N++G V ++ A W ELI+I + VP SF+GHLGGI
Sbjct: 146 AIGFSATLFALKVIALCEERDRLHNINGFQVQSKLAVWVELILIHLLVPNASFVGHLGGI 205
Query: 211 LAGILY 216
L G LY
Sbjct: 206 LVGCLY 211
>gi|348537952|ref|XP_003456456.1| PREDICTED: rhomboid domain-containing protein 1-like [Oreochromis
niloticus]
Length = 298
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 27/221 (12%)
Query: 33 PPVTAALLATNTLIYL-RPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
P +T A+L N +Y+ PA S+ +V+ N K+ +R LSP +H + H
Sbjct: 25 PAITLAVLGFNVYLYVFPPAPPLKACMSLDQVYRN-------KEWRRLLLSPLHHIDDWH 77
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALL-------GMSQGITLLLAKSLVL---FF 141
L++NM S LWKGI+LE +G + F ++ + Q + + L +
Sbjct: 78 LYFNMASFLWKGIRLERRLGGSWFLYLLSVFFLLTGLVYLLLQALMIKLMEGTDRSDPLL 137
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPG 200
+Y +A+ E AVGFSGVLFA+KVV N + T V + V R+A+W EL++I + PG
Sbjct: 138 EYVQAFSRECAVGFSGVLFALKVVNNHFNPGGVTYVMNIRVSNRFASWVELVLIYLIAPG 197
Query: 201 VSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
S +GHL G+L G+LY + PL TI+ +LS
Sbjct: 198 TSLVGHLAGVLVGLLYT--------AGPLKTIMEACADMLS 230
>gi|198416524|ref|XP_002119628.1| PREDICTED: similar to rhomboid domain containing 1 [Ciona
intestinalis]
Length = 333
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 5/190 (2%)
Query: 33 PPVTAALLATNTLIYL--RPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PPVT +A N ++L FL+ P +V + K +D R + F+H +
Sbjct: 34 PPVTLGTIALNVGVFLGFVHKFLNLPFPHPLQVCAGVAQVWKRRDYWRIVEATFHHGGDW 93
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL+YNM+S LWKG LE +GS F M+ + + L L F + +Y ++
Sbjct: 94 HLYYNMISFLWKGRSLERKIGSKRFLYMIAVFSVLVNYVMLWLNYGAANVFR-DGSYINQ 152
Query: 151 YAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELIIIQMFVPGVSFLGHLG 208
A+GFSGV+FA+KVV E T + +P +R + W ELI+IQ+ VP SF GHL
Sbjct: 153 CAIGFSGVVFAVKVVTTQLMEPGTVLLLGFIPVNSRLSCWFELILIQVLVPNASFTGHLA 212
Query: 209 GILAGILYLK 218
GIL G+ Y+K
Sbjct: 213 GILVGLAYVK 222
>gi|391331176|ref|XP_003740026.1| PREDICTED: rhomboid domain-containing protein 1-like [Metaseiulus
occidentalis]
Length = 471
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 22/234 (9%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT + ++L + SI E + + +++ ++ R F S H+ HL
Sbjct: 28 PPVTLGTIGLQVCLFL--GLIKVPWRSIEECCISAYTLIERREFMRIFSSALEHSDSYHL 85
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+YNM S +WKGI LE+ MG+ FA ++V + +++ + +L + F + S A
Sbjct: 86 YYNMASFVWKGIILESVMGAPFFAYLLVVFTILVALVSVSINYALAILFS-SFDFMSSCA 144
Query: 153 VGFSGVLFAMKVVLNSRSEDYTNVHG---LLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
+GFSGV+FA+KVV+N D V G L VP W EL +I +FVP SF+GHL G
Sbjct: 145 IGFSGVIFALKVVVNKVYPDVHPVIGGYNLRVPGGMYVWLELALISLFVPRASFVGHLAG 204
Query: 210 ILAGILY--------LKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPR 255
IL G Y + G +G +P RGA Y +RRP+
Sbjct: 205 ILVGTAYSVGFLHPIFDIFGAVAGYNPHRQWTRGAQP--------RSYGYRRPQ 250
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 21 HAFNEYHRLPWKPPVTAALLATNTLIY---LRPAFLDSLVPSIHEVWFNPHLILKYKDLK 77
+AF + R P P +T L AT ++ L P L L + N +L+
Sbjct: 262 YAFFQVQRFP--PILTTLLAATLVGVFYHDLLPEQLKVLYRYVGGKCLNSYLVFDAHRYA 319
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
F +P + + HL Y++++LL G +E +G +A +V+ L S + L K +
Sbjct: 320 SIFTAPLHTLNGYHLLYSVLTLLRVGSNIERRVGLLRYAILVLILTAGSSLAYVCLVKYV 379
Query: 138 VL-------FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL-----VPARY 185
++ + YE Y + +G + +L AMK+ + Y N L+ +P +
Sbjct: 380 LVRAESVGGVYPYEMKY--KCFMGPTAILIAMKLA-HGELLPYLNSTFLIFELPAIPLVF 436
Query: 186 AAWAELIIIQMFVPGVSFLGHLGGILAGILYLKL 219
E+ ++ M P +G+ G+LAG++++ +
Sbjct: 437 VVLGEIFLLHMLFPQAWVVGNAAGMLAGLVFVTI 470
>gi|255083188|ref|XP_002504580.1| predicted protein [Micromonas sp. RCC299]
gi|226519848|gb|ACO65838.1| predicted protein [Micromonas sp. RCC299]
Length = 381
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 4/204 (1%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKD 75
+LA+ + + RLP KPPVT A++ + ++ FL+ + S E+ + I++
Sbjct: 50 MLAMQLWQQIERLPVKPPVTLAVMGASAALHF--GFLNLPMGTSAAEMCLSAGAIVEAGQ 107
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R S + E HL YN+ S LWKG LE MGS +F +++ LL + + + +
Sbjct: 108 FYRILTSFLSYGDEMHLIYNLSSFLWKGANLEIKMGSEKFTKLLIGLLVCTNAMAVGVMY 167
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQ 195
++ + AY + +G +GV FA+K +L + T++ G+ +P+++A+WAEL ++
Sbjct: 168 AMAAYLGMPEAYRNSCVMGNNGVNFALKTILFADEASNTSMLGITMPSKWASWAELGLMY 227
Query: 196 MFVPGVS-FLGHLGGILAGILYLK 218
+ P + + H+ GIL G+ YL+
Sbjct: 228 LMYPHTAGLVVHVCGILVGLAYLR 251
>gi|311273152|ref|XP_003133738.1| PREDICTED: rhomboid domain-containing protein 1-like [Sus scrofa]
Length = 299
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A LA N +L P L L S V + KD +R LSP +H + HL
Sbjct: 28 PPVTVATLALNIWFFLNP--LKPLFSSCLSV----EKCYQQKDWQRLLLSPLHHVDDWHL 81
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
++NM S+LWKGI LE +GS F A ++A + G+ LL + + E + A
Sbjct: 82 YFNMASMLWKGINLERRLGSRWF-AYIIATFSLLTGVVYLLLEFALAELLDEPGFRRNCA 140
Query: 153 VGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPG 200
VGFSGVLFA+KV+ N + NV G VP ++A WAEL+ I PG
Sbjct: 141 VGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNKFACWAELLAIHFISPG 189
>gi|359481109|ref|XP_002267146.2| PREDICTED: uncharacterized protein At3g58460-like [Vitis vinifera]
gi|296089310|emb|CBI39082.3| unnamed protein product [Vitis vinifera]
Length = 406
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P +T+A++ ++IYL + DS V E+ F+P I+ + R + + +H S
Sbjct: 23 PFLTSAVVIICSIIYLVCLLVGYDSFV----EICFSPSAIISQFQVYRIYTAIIFHGSLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY-- 148
H+ +NMM+L+ G +LE MGS M+V LL S I +L SLV + + +Y
Sbjct: 79 HVLFNMMALVPLGSELERIMGSVRLFYMIV-LLATSNAIFHVLIASLVAYNPFYSYHYLM 137
Query: 149 SEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGH 206
+E A+GFSG+LF+M V+ S S T +V GL VPA++ AW L++ Q+ + VS LGH
Sbjct: 138 NECAIGFSGILFSMIVIETSLSGAQTRSVFGLFNVPAKWYAWILLVVFQLLMTNVSLLGH 197
Query: 207 LGGILAGILY 216
L GIL+G Y
Sbjct: 198 LCGILSGFAY 207
>gi|67968683|dbj|BAE00700.1| unnamed protein product [Macaca fascicularis]
Length = 232
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 96 MMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGF 155
M S+LWKGI LE +GS FA +V+ + G+ LL + V F E + AVGF
Sbjct: 1 MASMLWKGIHLERRLGSRWFA-LVITTFSILTGVVYLLLQFAVAEFMDEPDFKRSCAVGF 59
Query: 156 SGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGI 214
SGVLFA+KV+ N + N+ G VP R+A W EL+ I +F PG SF GHL GIL G+
Sbjct: 60 SGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGL 119
Query: 215 LYLKLKGGYSGSDPLTTIIRGATGVLS 241
+Y + PL ++ G S
Sbjct: 120 MYTQ--------GPLKKMMEACAGGFS 138
>gi|301122523|ref|XP_002908988.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099750|gb|EEY57802.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 269
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 16 PLLA-LHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYK 74
PL+ L + E R KPPVT AL+ L++++ + SL+ S P + K
Sbjct: 27 PLMTMLKSVQEMDR---KPPVTLALMGIMYLLHVQAKRMPSLLLSYA---LCPGKVAANK 80
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
++ L+PF H+ E +L +S LWKG +LE +GS F ++V L+ +SQ + + A
Sbjct: 81 EIGAVILAPFIHSEELYL----LSFLWKGYKLEGRLGSIGFCILLVYLIVVSQLLIVFGA 136
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
+ + E GFSGVL AMKV+LN S +T ++ +P +YAAW EL+I
Sbjct: 137 HMISM------GATQECFTGFSGVLTAMKVILNVNSPTFTKLYSFKIPTKYAAWLELLIT 190
Query: 195 QMFVPGVSFLGHLGGILAGILYL 217
+ VP + L G++AG +Y+
Sbjct: 191 YLLVPKLPLLAQAAGLVAGYIYV 213
>gi|393907597|gb|EJD74708.1| hypothetical protein LOAG_18018 [Loa loa]
Length = 314
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 114/229 (49%), Gaps = 18/229 (7%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHE-VWFNPHLILKYKD 75
LLA FN P PP+T A++ I+L +L L E + P IL +
Sbjct: 17 LLAYQLFNS----PNIPPITLAVIIFQMAIFL--GYLPLLGQHRTEAMCLLPSRILYRSE 70
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R S H + HL++NM+SLLWKG +LE +GS F ++ + + L+
Sbjct: 71 WLRMLASTVMHVDDMHLYFNMISLLWKGRRLEPWLGSRRFLLLLATFALATSSTMVGLSY 130
Query: 136 SLVLFFDYERA-YYSEYAVGFSGVLFAMKVVLNSR--SEDYTNVHGLLVPARYAAWAELI 192
F + Y ++ AVGFSGVLFA+KV+ + D+ L +P+++A WAELI
Sbjct: 131 LADEVFTFNGGGYMNQCAVGFSGVLFALKVLHTTHFPYSDHNLFGWLPIPSQFACWAELI 190
Query: 193 IIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
++QM P SF+GHL GI+ G+ Y PL T++ ++S
Sbjct: 191 LLQMLTPNASFIGHLSGIIVGLAYTM--------GPLKTVVDILESIIS 231
>gi|301122517|ref|XP_002908985.1| serine protease family S54, putative [Phytophthora infestans T30-4]
gi|262099747|gb|EEY57799.1| serine protease family S54, putative [Phytophthora infestans T30-4]
Length = 298
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 146/340 (42%), Gaps = 72/340 (21%)
Query: 4 GGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEV 63
G R +G+ LL L + +L KPPVT L+A ++ F P +
Sbjct: 13 GPNAGRNGQGIALLLML--MQQIQQLERKPPVTLGLMALMYGLH----FQKEQSPELFSP 66
Query: 64 W-FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL 122
+ P +L + DL R S H + HL++NM+S LWKG LE MGS F VV L
Sbjct: 67 YSLCPDRVLSHWDLTRIVASGLIHVDDWHLYHNMVSFLWKGCNLEYKMGSVRFLLTVVYL 126
Query: 123 LGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP 182
L + + +++A L A GF M V+LN S +++V+G VP
Sbjct: 127 LVLCHVLVVVVALVL--------------ATGFQ-----MPVLLNHNSPAFSSVYGFQVP 167
Query: 183 ARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSW 242
+YAAW EL++I VP SF+GH+ GILAG L++ S + +++ G
Sbjct: 168 TKYAAWLELVVIHFLVPRSSFIGHMCGILAGYLFVY-------SSVMQSVMTSGAGA--- 217
Query: 243 PLRFARYLFRRPRIYGRGTVGGSDTRRTAPI--IWRCPACTFDNSGWLSICEMCGTSRSG 300
F+R+L R G + R P R P +F+ ++
Sbjct: 218 ---FSRWL--------RAVAGPTYYRHDTPPPRYSRPPTSSFETDEDIA----------- 255
Query: 301 NDLSSDQLSRHS------------NIPLEELRHRRIERFG 328
L ++ H+ +I ELR RR+ RFG
Sbjct: 256 RRLQEEEYQDHAAPQPQPGQPTPEHISPSELRRRRLARFG 295
>gi|303281010|ref|XP_003059797.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458452|gb|EEH55749.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 153
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 18 LALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK 77
+A+ +NE RLP KPPVT ++A ++ ++ L S + NP +++ +
Sbjct: 1 MAIRLWNEIDRLPVKPPVTLGVMALSSALHF--GILGDRTFSASDACLNPRAVIELGEWH 58
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA-KS 136
R +P ++A E HL YN+ S+LWKG+QLET MGS FA ++V LL +A +
Sbjct: 59 RLVTAPLFYADEMHLVYNLSSMLWKGVQLETRMGSEAFAKLLVFLLVSVNAAACAVAWVT 118
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNS 168
F E AYY G +GVLFA+K V+ S
Sbjct: 119 RAHFASVEEAYYRSCVTGSAGVLFALKSVIFS 150
>gi|242001818|ref|XP_002435552.1| hypothetical protein IscW_ISCW006085 [Ixodes scapularis]
gi|215498888|gb|EEC08382.1| hypothetical protein IscW_ISCW006085 [Ixodes scapularis]
Length = 453
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT A++ +L L P+ E + ++ R + F H HL
Sbjct: 29 PPVTLAIVVAQACTFLGLVDLPWRSPA--EACISVDKVVFRGQWWRILFAAFEHGDSFHL 86
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+YNM+S +WKGI++ET +GS F +V G++ G+TL+ L F ++ + A
Sbjct: 87 YYNMVSFIWKGIRMETELGSAYFLYIVCLFTGLT-GVTLVGLSYLCGMF-VNPSFNYQCA 144
Query: 153 VGFSGVLFAMKVVLNSRSEDYT-NVHGLLV--PARYAAWAELIIIQMFVPGVSFLGHLGG 209
VGFS V+FA+KV+ N + + G+ V P+ WAEL++IQ+ P SFLGHL G
Sbjct: 145 VGFSAVIFALKVLNNHYWPGISPTIMGMSVSMPSGLIVWAELVLIQLVTPNASFLGHLAG 204
Query: 210 ILAGILYL 217
IL G+ Y+
Sbjct: 205 ILVGLAYV 212
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 31 WKPPVTAALLATNTLIY---LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
++ PV AAL+++ + + L P FL ++ N +L+LK + ++ + +
Sbjct: 252 FRIPVGAALISSALVAHKMRLLPVFLSY---KLNNPCVNSYLVLKQERWEQLLVPALHTY 308
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA- 146
+ HL Y ++SLL G LE +G+ +FA +A ++ + L VL + E
Sbjct: 309 NSMHLLYTVVSLLGLGFYLERRLGTVQFALTTLA-ATVATNLAYCLMTHFVLPYAKEIDG 367
Query: 147 ---YYSEYA--VGFSGVLFAMKVVLNSRSEDYTNVHGLL---VPARYAAWAELIIIQMFV 198
+ EY +G +G L A+KV+ + + + VP E+ ++ +
Sbjct: 368 IPHFEMEYKCFLGMTGALMALKVIYSYYYPYAGYLLFFIEVPVPKFIGLVLEIALLHFLL 427
Query: 199 PGVSFLGHLGGILAGILYL 217
P V +G++ G GI+Y+
Sbjct: 428 PHVWIVGNVVGFAVGIVYV 446
>gi|427785133|gb|JAA58018.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 450
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
K R F H HL+YNM+S +WKG+ LE +G +FA ++V + + L L
Sbjct: 68 KQWLRIFYGAIEHGDSLHLYYNMVSFIWKGMLLEPVLGGAQFAYIIVLFTALCGIVLLGL 127
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLN----SRSEDYTNVHGLLVPARYAAWA 189
L F D A+Y + AVGFSGV+FA+KV+ N RS + + + +PA W
Sbjct: 128 NYLLGTFVD--SAFYYQCAVGFSGVIFALKVLNNYYFPGRSRRFLGI-DIDLPAGQVVWL 184
Query: 190 ELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFAR 248
EL++IQ+ P S +GHL GIL G+ Y+ Y P++ ++ G P R R
Sbjct: 185 ELVLIQLVTPNASLVGHLAGILVGLAYV-----YGVITPVSDLVWNLLG--QQPTRLTR 236
>gi|224178866|ref|XP_002193393.1| PREDICTED: rhomboid-related protein 4-like [Taeniopygia guttata]
Length = 189
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 33 PPVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
P VT +L N ++L P L S++E + K+ +R L+PF+HA + H
Sbjct: 28 PSVTLGVLVLNIFLFLNPLRPLSEACLSVNEAVYR-------KNWQRLLLAPFHHADDWH 80
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L+YNM+S+LWKGI LE + S F A ++A+ + GI ++ + L++ + +Y
Sbjct: 81 LYYNMISMLWKGIMLERKLKSIWF-AYIIAVFSVLIGIVYMVLELLLVIILDDPSYEMNC 139
Query: 152 AVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPG 200
VGFSGVLFA+KV+ N + ++V GL + ++YA W EL+ I PG
Sbjct: 140 GVGFSGVLFALKVLNNHYNPGRVSSVLGLPISSKYACWVELLAIHFISPG 189
>gi|255581586|ref|XP_002531598.1| Rhomboid protein, putative [Ricinus communis]
gi|223528794|gb|EEF30801.1| Rhomboid protein, putative [Ricinus communis]
Length = 397
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T+A++ IYL + S E+ F P I+ + + R + S +H S H+
Sbjct: 23 PFLTSAIVIVCGTIYLACLLIG--YDSFFEICFLPSAIISHFQVYRIYTSILFHGSLLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF--FDYERAYYSE 150
F+NMM+L+ G +LE MGS + + LL S I L +LV F ++ +E
Sbjct: 81 FFNMMALVPLGSELERIMGSVRLLYLTI-LLATSNAIFHLFIATLVAHNPFHSDQHLINE 139
Query: 151 YAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLG 208
A+GFSG+LF+M V+ S S + +V GL VPA++ A+ L++ Q+ + VS LGHL
Sbjct: 140 CAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFILLVVFQLLMTNVSLLGHLC 199
Query: 209 GILAGILY 216
GIL+G Y
Sbjct: 200 GILSGFAY 207
>gi|356570925|ref|XP_003553633.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g58460-like [Glycine max]
Length = 415
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 13/191 (6%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T+A++ +IYL + S +EV F P ++ + R + S +H S H+
Sbjct: 29 PFLTSAVVVVCGIIYLVCLLVG--YDSFNEVCFLPSAVVSRFQVYRIYTSILFHGSLLHV 86
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG-----ITLLLAKSLVLFFDYERAY 147
+NMM+L+ G +LE MGS V+ L+ S I LL+A + +L +DY
Sbjct: 87 VFNMMALVPLGSELERIMGSVRL-LYVIILVATSNAIFHVLIALLVAHNPLLTYDY---L 142
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLG 205
+E A+GFSGVLF+M V+ S S + +V GL VPA++ A+ L++ Q+ + VS LG
Sbjct: 143 MNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVSLLG 202
Query: 206 HLGGILAGILY 216
HL GIL+G Y
Sbjct: 203 HLCGILSGFAY 213
>gi|18410961|ref|NP_567064.1| rhomboid-like protein 15 [Arabidopsis thaliana]
gi|73921121|sp|Q8LB17.2|Y3846_ARATH RecName: Full=Uncharacterized protein At3g58460
gi|22531096|gb|AAM97052.1| putative protein [Arabidopsis thaliana]
gi|23197956|gb|AAN15505.1| putative protein [Arabidopsis thaliana]
gi|332646263|gb|AEE79784.1| rhomboid-like protein 15 [Arabidopsis thaliana]
Length = 403
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T++++ +IYL L + + +EV F P I+ + RF+ + +H S H+
Sbjct: 23 PFLTSSVVVVCGVIYL--ICLLTGYDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSLLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV---LFFDYERAYYS 149
+NMM+L+ G +LE MGS + V LL + + LL SL F+ Y+ +
Sbjct: 81 LFNMMALVPMGSELERIMGSVRLLYLTV-LLATTNAVLHLLIASLAGYNPFYQYDH-LMN 138
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHL 207
E A+GFSG+LF+M V+ S S + +V GL VPA+ W LI+ Q+ + VS LGHL
Sbjct: 139 ECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSLLGHL 198
Query: 208 GGILAGILY 216
GIL+G Y
Sbjct: 199 CGILSGFSY 207
>gi|334186083|ref|NP_001190126.1| rhomboid-like protein 15 [Arabidopsis thaliana]
gi|332646264|gb|AEE79785.1| rhomboid-like protein 15 [Arabidopsis thaliana]
Length = 426
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T++++ +IYL L + + +EV F P I+ + RF+ + +H S H+
Sbjct: 46 PFLTSSVVVVCGVIYL--ICLLTGYDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSLLHV 103
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV---LFFDYERAYYS 149
+NMM+L+ G +LE MGS + V LL + + LL SL F+ Y+ +
Sbjct: 104 LFNMMALVPMGSELERIMGSVRLLYLTV-LLATTNAVLHLLIASLAGYNPFYQYDH-LMN 161
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHL 207
E A+GFSG+LF+M V+ S S + +V GL VPA+ W LI+ Q+ + VS LGHL
Sbjct: 162 ECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSLLGHL 221
Query: 208 GGILAGILY 216
GIL+G Y
Sbjct: 222 CGILSGFSY 230
>gi|227204337|dbj|BAH57020.1| AT3G58460 [Arabidopsis thaliana]
Length = 362
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T++++ +IYL L + + +EV F P I+ + RF+ + +H S H+
Sbjct: 23 PFLTSSVVVVCGVIYL--ICLLTGYDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSLLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV---LFFDYERAYYS 149
+NMM+L+ G +LE MGS + V LL + + LL SL F+ Y+ +
Sbjct: 81 LFNMMALVPMGSELERIMGSVRLLYLTV-LLATTNAVLHLLIASLAGYNPFYQYDH-LMN 138
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHL 207
E A+GFSG+LF+M V+ S S + +V GL VPA+ W LI+ Q+ + VS LGHL
Sbjct: 139 ECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSLLGHL 198
Query: 208 GGILAGILY 216
GIL+G Y
Sbjct: 199 CGILSGFSY 207
>gi|21593075|gb|AAM65024.1| unknown [Arabidopsis thaliana]
Length = 403
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T++++ +IYL L + + +EV F P I+ + RF+ + +H S H+
Sbjct: 23 PFLTSSVVVVCGVIYL--ICLLTGYDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSLLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV---LFFDYERAYYS 149
+NMM+L+ G +LE MGS + V LL + + LL SL F+ Y+ +
Sbjct: 81 LFNMMALVPMGSELERIMGSVRLLYLTV-LLATTNAVLHLLIASLAGYNPFYQYDH-LMN 138
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHL 207
E A+GFSG+LF+M V+ S S + +V GL VPA+ W LI+ Q+ + VS LGHL
Sbjct: 139 ECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSLLGHL 198
Query: 208 GGILAGILY 216
GIL+G Y
Sbjct: 199 CGILSGFSY 207
>gi|356505467|ref|XP_003521512.1| PREDICTED: uncharacterized protein At3g58460-like [Glycine max]
Length = 414
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 13/191 (6%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T+A++ +IYL + S +EV F P ++ + R + S +H S H+
Sbjct: 29 PFLTSAVVVVCGVIYLICLLVG--YDSFYEVCFLPSAVVSRFQVYRIYTSILFHGSLLHV 86
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG-----ITLLLAKSLVLFFDYERAY 147
+NMM+L+ G +LE MGS V+ L+ S I LL+A + +L +DY
Sbjct: 87 VFNMMALVPLGSELERIMGSVRL-LYVIILVATSNAIFHVLIALLVAHNPLLTYDY---L 142
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLG 205
+E A+GFSGVLF+M V+ S S + +V GL VPA++ A+ L++ Q+ + VS LG
Sbjct: 143 MNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVSLLG 202
Query: 206 HLGGILAGILY 216
HL GIL+G Y
Sbjct: 203 HLCGILSGFAY 213
>gi|6735363|emb|CAB68184.1| putative protein [Arabidopsis thaliana]
Length = 411
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T++++ +IYL L + + +EV F P I+ + RF+ + +H S H+
Sbjct: 23 PFLTSSVVVVCGVIYL--ICLLTGYDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSLLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV---LFFDYERAYYS 149
+NMM+L+ G +LE MGS + V LL + + LL SL F+ Y+ +
Sbjct: 81 LFNMMALVPMGSELERIMGSVRLLYLTV-LLATTNAVLHLLIASLAGYNPFYQYDH-LMN 138
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHL 207
E A+GFSG+LF+M V+ S S + +V GL VPA+ W LI+ Q+ + VS LGHL
Sbjct: 139 ECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSLLGHL 198
Query: 208 GGILAGILY 216
GIL+G Y
Sbjct: 199 CGILSGFSY 207
>gi|297820678|ref|XP_002878222.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297324060|gb|EFH54481.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T++++ +IYL L + + +EV F P I+ + RF+ + +H S H+
Sbjct: 23 PFLTSSVVVVCGVIYL--ICLLTGYDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSLLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV---LFFDYERAYYS 149
+NMM+L+ G +LE MGS + + LL + I L+ SL F+ Y+ +
Sbjct: 81 LFNMMALVPMGSELERIMGSVRLLYLTI-LLATTNAILHLIIASLAGYNPFYQYDH-LMN 138
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHL 207
E A+GFSG+LF+M V+ S S + +V GL VPA+ W LI+ Q+ + VS LGHL
Sbjct: 139 ECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSLLGHL 198
Query: 208 GGILAGILY 216
GIL+G Y
Sbjct: 199 CGILSGFSY 207
>gi|326500926|dbj|BAJ95129.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 401
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
S E+ F P + + + RF+ S +H S H+ +NM++ + G +LE MGS +
Sbjct: 47 SYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFL 106
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYERAYYSEY-----AVGFSGVLFAMKVVLNSRS-ED 172
+ LL + I L+ LV DY Y+ Y ++GFSGV+F+M V+ S S
Sbjct: 107 MF-LLATTNAIFHLIVAFLV---DYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSGVQ 162
Query: 173 YTNVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
Y +V GL VPA++ AW LI+ Q VS LGHL GIL+G Y
Sbjct: 163 YRSVFGLFNVPAKWYAWILLILFQFLASNVSLLGHLSGILSGFAY 207
>gi|224091513|ref|XP_002309277.1| predicted protein [Populus trichocarpa]
gi|222855253|gb|EEE92800.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T+A++ +IYL + S +E+ F P ++ + + R + S F+H S H+
Sbjct: 23 PFLTSAVVVVCGVIYLVCLLIG--YDSFYEICFLPTAVVSHFQVYRIYTSIFFHGSLLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY--SE 150
+NM++L+ G +LE MGS A +++ LL + I L LV + Y E
Sbjct: 81 LFNMLALVPLGSELERIMGSIRLAYLII-LLATTNAIFHLFIALLVAHNPFHPYQYLLDE 139
Query: 151 YAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLG 208
A+GFSG+LF+M V+ S S + +V GL VPA++ A+ L+ Q+ + VS LGHL
Sbjct: 140 CAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFILLVAFQLLMTNVSLLGHLC 199
Query: 209 GILAGILY 216
GIL+G Y
Sbjct: 200 GILSGFAY 207
>gi|449518911|ref|XP_004166479.1| PREDICTED: uncharacterized protein At3g58460-like [Cucumis sativus]
Length = 344
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 11/191 (5%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P T++++ IYL + DS V EV F P IL + + R F S +H S
Sbjct: 31 PFFTSSIILICGTIYLVCLLVGYDSFV----EVCFLPVAILSHFQVYRIFTSVLFHGSLL 86
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF--FDYERAYY 148
H+ +NM++L+ G +LE MGS + + LL +S I L ++ F +
Sbjct: 87 HVLFNMLALVPLGSELERIMGSIRMLYLTI-LLAISNAIIHLFIAVVMAHNPFHHYDNLM 145
Query: 149 SEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGH 206
+E A+GFSG+LF++ V+ S S + +V GL VPA++ W L++ Q+ + VSFLGH
Sbjct: 146 NECAIGFSGILFSLIVIETSLSGIQSRSVFGLFNVPAQWYVWILLVVFQLLMTNVSFLGH 205
Query: 207 LGGILAGILYL 217
L GI+ G Y+
Sbjct: 206 LCGIITGFAYI 216
>gi|224001444|ref|XP_002290394.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973816|gb|EED92146.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 331
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 6/187 (3%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P T +++A +YL D P++H P L+L + R S +H S H+
Sbjct: 12 PLATLSIMALCCFVYLYQLAFD---PTLHNFTMCPRLVLYMNEYYRIITSSLFHGSLMHI 68
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
NMMS + G LE G+ A V+ + ++ I + + L + F YE+ Y +++
Sbjct: 69 GMNMMSTMAIGTSLEKRFGTFTMALTVLWGVLLTSVIYMTTSWLLYVGFGYEKMMY-QHS 127
Query: 153 VGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
+GFSGV+F + V+ + + + + +V G++ V ++ W L+++Q +P +SFLGHL GI
Sbjct: 128 LGFSGVIFQLSVLEANLTPNRSRSVFGMIQVSSKMYPWCLLVVLQFIMPQISFLGHLSGI 187
Query: 211 LAGILYL 217
L G L L
Sbjct: 188 LLGTLQL 194
>gi|449459580|ref|XP_004147524.1| PREDICTED: uncharacterized protein At3g58460-like [Cucumis sativus]
Length = 397
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 11/191 (5%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P T++++ IYL + DS V EV F P IL + + R F S +H S
Sbjct: 23 PFFTSSIILICGTIYLVCLLVGYDSFV----EVCFLPVAILSHFQVYRIFTSVLFHGSLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF--FDYERAYY 148
H+ +NM++L+ G +LE MGS + + LL +S I L ++ F +
Sbjct: 79 HVLFNMLALVPLGSELERIMGSIRMLYLTI-LLAISNAIIHLFIAVVMAHNPFHHYDNLM 137
Query: 149 SEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGH 206
+E A+GFSG+LF++ V+ S S + +V GL VPA++ W L++ Q+ + VSFLGH
Sbjct: 138 NECAIGFSGILFSLIVIETSLSGIQSRSVFGLFNVPAQWYVWILLVVFQLLMTNVSFLGH 197
Query: 207 LGGILAGILYL 217
L GI+ G Y+
Sbjct: 198 LCGIITGFAYI 208
>gi|412988172|emb|CCO17508.1| predicted protein [Bathycoccus prasinos]
Length = 329
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 19 ALHAFNEYHRLPWKPPVTAALLATNTLIYLRP-AFLDSLVPSIHEVWFNPHLILKYKDLK 77
A + +Y +P KP T ++A Y L+ ++ I F+P +L+ +L+
Sbjct: 24 AYRMYQQYQAVPNKPHGTLVVMAVMASYYFEVFPLLNDIIGDISSACFSPAKVLRDFELQ 83
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMG--SNEFAAMVVALLGMSQGITLLLAK 135
R S F H E HL YN+ SLL KGI+LE G + +F + + ++ G ++A
Sbjct: 84 RTLFSSFVHGDELHLAYNLSSLLTKGIKLEERYGGKAEKFVLLFCLVSVLTHGFAAIIAG 143
Query: 136 SLVL--FFDYERAYYSEYAVGFSGVLFAMK-VVLNSRSEDYTNVHGLLVPARYAAWAELI 192
L FD + Y + Y G SGVLFA++ +VL + GL VPA A E+
Sbjct: 144 GLFHSGLFDGDVYYNATY--GSSGVLFALQTIVLGENPRGNYSFFGLQVPAHRLALTEVG 201
Query: 193 IIQMFVPG-VSFLGHLGGILAGILYLK 218
++ + P ++ + H+ GILAG+L L+
Sbjct: 202 LLYLMNPSTLNLIVHVSGILAGMLVLR 228
>gi|307107576|gb|EFN55818.1| hypothetical protein CHLNCDRAFT_145331 [Chlorella variabilis]
Length = 361
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFY 94
T L+A +++RP L +V N H +L + + +R HA +HL
Sbjct: 96 ATVGLVAAQAALHMRPGGYRLL-----QVGLNTHRVLHHGEYRRLLTGVMLHADMTHLVS 150
Query: 95 NMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF---DYERAYYSEY 151
N S++ +G+ LE +GS F A+V + SQG+ LL + V F YY +
Sbjct: 151 NCTSVVLEGLPLERRLGSPAFLALVASTSLTSQGLYLLSTRLAVRFLPNSSLANDYYLSF 210
Query: 152 AVGFSGVLFAMKVVLN-SRSEDYTNVHG------LLVPARYAAWAELIIIQMFVPGVSFL 204
VGFSG+ A++VV R D +L R AAW L++ P S
Sbjct: 211 VVGFSGIALALRVVGGYMREADLAAAQVAPSEEFVLTAGRLAAWPSLLMSHALFPNASLT 270
Query: 205 GHLGGILAGILYL 217
GHL GI G+L++
Sbjct: 271 GHLCGIATGVLHV 283
>gi|384252274|gb|EIE25750.1| rhomboid-domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 286
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
V NPH++++ + R F S F+HA H+ +NM++ + + LE +GS + +++
Sbjct: 47 AVCLNPHILVERFQVFRLFTSAFFHAGLLHIGFNMLAFVPVAMSLERQLGSLQTLHLLLM 106
Query: 122 LLGMSQGITLLLAKSLVLFFDYE-RAYYSEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGL 179
L+ + I + A L F + R+Y + A+G SG +F + VV N+ S T ++ G+
Sbjct: 107 LILVGD-IFYISASYLASFVLADARSYLASCAIGLSGAIFGLIVVDNACSGAQTRSIFGM 165
Query: 180 L-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYL 217
V A++ WA L+ Q+ +PGVSFLGHLGG+LAG Y+
Sbjct: 166 FTVSAKWYPWALLVFWQLLMPGVSFLGHLGGVLAGQAYV 204
>gi|302756069|ref|XP_002961458.1| hypothetical protein SELMODRAFT_140420 [Selaginella moellendorffii]
gi|300170117|gb|EFJ36718.1| hypothetical protein SELMODRAFT_140420 [Selaginella moellendorffii]
Length = 413
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLV--PSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P +T L IY+ +D L+ + +V F+ ++ + R + +HAS
Sbjct: 23 PAITGGTLILCVAIYI----VDLLIGYDTFQQVCFSTDTVIGNFQVYRAITAVLFHASLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF--FDYERAYY 148
H+ +NM++L+ G LE MGS + V+ LL +S + +L +V + ++
Sbjct: 79 HVLFNMLALVPIGSSLERVMGSVRYL-HVILLLAVSNAVIHILIAYIVAYNPIYVHKSVL 137
Query: 149 SEYAVGFSGVLFAMKVVLNS-RSEDYTNVHGLL-VPARYAAWAELIIIQMFVPGVSFLGH 206
E +GFSG+LFAM V+ S + ++ GL VPA++ W LII QM +P VS LGH
Sbjct: 138 MECQIGFSGILFAMIVIEGSLYTGQNRSIFGLFNVPAKWYPWVLLIIFQMIMPRVSLLGH 197
Query: 207 LGGILAGILY 216
L GIL+G Y
Sbjct: 198 LSGILSGFSY 207
>gi|302776366|ref|XP_002971354.1| hypothetical protein SELMODRAFT_147697 [Selaginella moellendorffii]
gi|300161336|gb|EFJ27952.1| hypothetical protein SELMODRAFT_147697 [Selaginella moellendorffii]
Length = 413
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLV--PSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P +T L IY+ +D L+ + +V F+ ++ + R + +HAS
Sbjct: 23 PAITGGTLILCVAIYI----VDLLIGYDNFQQVCFSTDSVIGNFQVYRAITAVLFHASLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF--FDYERAYY 148
H+ +NM++L+ G LE MGS + V+ LL +S + +L +V + ++
Sbjct: 79 HVLFNMLALVPIGSSLERIMGSVRYL-HVILLLAVSNAVIHILIAYIVAYNPIYVHKSVL 137
Query: 149 SEYAVGFSGVLFAMKVVLNS-RSEDYTNVHGLL-VPARYAAWAELIIIQMFVPGVSFLGH 206
E +GFSG+LFAM V+ S + ++ GL VPA++ W LII QM +P VS LGH
Sbjct: 138 MECQIGFSGILFAMIVIEGSLYTGQNRSIFGLFNVPAKWYPWVLLIIFQMIMPRVSLLGH 197
Query: 207 LGGILAGILY 216
L GIL+G Y
Sbjct: 198 LSGILSGFAY 207
>gi|428171532|gb|EKX40448.1| hypothetical protein GUITHDRAFT_75573, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 67 PHLI-LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
PH+I + ++ R S F H HL +NM + ++ G +LE MG+ F ++V + +
Sbjct: 4 PHVIWIDHRQCYRIVTSAFVHGGFLHLGFNMYNFVFAGGRLEQMMGTVRFVNLIVVWV-L 62
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYT--NVHGLLVPA 183
GI + + F Y R +++E AVGFSGVLFA+ V + + T ++ G +PA
Sbjct: 63 VLGILYFVIAFVGALFQYAR-FWNECAVGFSGVLFAILTVDSFAAPLGTQFSMFGWQIPA 121
Query: 184 RYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
R+ WA LI Q+ +P VSF+GHL GIL ++
Sbjct: 122 RWYPWAMLIFTQVLMPNVSFIGHLVGILGAFVF 154
>gi|302843800|ref|XP_002953441.1| hypothetical protein VOLCADRAFT_94253 [Volvox carteri f.
nagariensis]
gi|300261200|gb|EFJ45414.1| hypothetical protein VOLCADRAFT_94253 [Volvox carteri f.
nagariensis]
Length = 412
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 105/234 (44%), Gaps = 18/234 (7%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT AL+A + YL P L EV +P+ ++ ++ R + + H HL
Sbjct: 118 PPVTLALVAASVWRYLNPVLL-------REVCLSPYCVIDRNEVGRLWTASLTHLDLPHL 170
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
N+ SLL LE GS F A V L +S G+ + A YY+ A
Sbjct: 171 MSNLASLLPDAAVLERQEGSALFIADVALLSTLSSGLFVGWAVLEKQVLQRTGTYYAVGA 230
Query: 153 VGFSGVLFAMKVVLN-SRSEDYTNVHGLLVPARYAAWAELIIIQMF-VPGVSFLGHLGGI 210
VG S + FA++VV + +R+ GL +P R++ L + P SF GH+ G+
Sbjct: 231 VGLSSLAFALQVVADETRAGGERRCLGLPLPGRFSWVLSLGFTHLVSAPDTSFAGHMCGV 290
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGTVGG 264
LAGI ++ Y L T++R L + RPR YG GT+ G
Sbjct: 291 LAGIAHV-----YLIRPALRTLLRS----LGNGVSGGGGARPRPRFYGGGTLSG 335
>gi|357119970|ref|XP_003561705.1| PREDICTED: uncharacterized protein At3g58460-like [Brachypodium
distachyon]
Length = 403
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
S E+ F P + + + RF+ S +H S H+ +NM++L G +LE MGS +
Sbjct: 47 SYREICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTLAPLGTELERIMGSVRLLFL 106
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYERAY-----YSEYAVGFSGVLFAMKVVLNSRSEDY 173
+ LL + + L+ LV Y Y E ++GFSGVLF+M V+ S S
Sbjct: 107 MF-LLATTNAVLHLIVAFLV---AYNPLYPVPSLVDECSIGFSGVLFSMIVIETSLSGVQ 162
Query: 174 T-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
+ +V GL +PA++ AW LI+ Q VS LGHL GIL+G Y
Sbjct: 163 SRSVFGLFNIPAKWYAWILLILFQFLASNVSLLGHLSGILSGFAY 207
>gi|159464026|ref|XP_001690243.1| rhomboid-like protease [Chlamydomonas reinhardtii]
gi|158284231|gb|EDP09981.1| rhomboid-like protease [Chlamydomonas reinhardtii]
Length = 394
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
+I+ V +P+ + + ++ R S H H+ +NM++ + LE +G+ +F +
Sbjct: 45 NIYGVCLSPYETVVHYEVYRLLTSVLVHGGLLHVTFNMLAFVPMACSLERLVGTVQFTYL 104
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYER-AYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNV 176
++ L+ + G+ + A S +LFF + A + A+GFSGV+F + VV N++S + ++
Sbjct: 105 LL-LMTVLAGL-VFTATSFLLFFSHVLPAAMRQCAIGFSGVIFGLIVVDNAQSASSHRSI 162
Query: 177 HGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGY----SGSDPLTT 231
GL VPA Y WA L+ Q+ +P VSF+GHL G+L G ++ GGY + S P T
Sbjct: 163 FGLFTVPAAYYPWALLLFWQLLMPSVSFIGHLAGVLVGAAWV---GGYLRPLALSRPATV 219
Query: 232 IIRGATGVLS 241
+ G G+ S
Sbjct: 220 WLEGWAGLSS 229
>gi|108710127|gb|ABF97922.1| expressed protein [Oryza sativa Japonica Group]
Length = 379
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
S E+ F P ++ + RF+ S +H S H+ +NM++L+ G +LE MGS +
Sbjct: 47 SFAEICFLPSVVASRFQVYRFYTSVVFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFL 106
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYERAYY--SEYAVGFSGVLFAMKVVLNSRSEDYT-N 175
+ LL + I L+ L + ++ E ++GFSGV+F+M V+ S S T +
Sbjct: 107 MF-LLATTNAIFHLIIAFLAAYNPLYPLHFLVDECSIGFSGVIFSMIVIETSLSGVQTRS 165
Query: 176 VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
V GL VPA + AW L++ Q VS LGHL GIL+G Y
Sbjct: 166 VFGLFNVPANWYAWILLVLFQFLASNVSLLGHLCGILSGFAY 207
>gi|31712095|gb|AAP68399.1| unknown protein [Oryza sativa Japonica Group]
gi|108710126|gb|ABF97921.1| expressed protein [Oryza sativa Japonica Group]
gi|218193411|gb|EEC75838.1| hypothetical protein OsI_12827 [Oryza sativa Indica Group]
gi|222625474|gb|EEE59606.1| hypothetical protein OsJ_11927 [Oryza sativa Japonica Group]
Length = 399
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
S E+ F P ++ + RF+ S +H S H+ +NM++L+ G +LE MGS +
Sbjct: 47 SFAEICFLPSVVASRFQVYRFYTSVVFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFL 106
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYERAYY--SEYAVGFSGVLFAMKVVLNSRSEDYT-N 175
+ LL + I L+ L + ++ E ++GFSGV+F+M V+ S S T +
Sbjct: 107 MF-LLATTNAIFHLIIAFLAAYNPLYPLHFLVDECSIGFSGVIFSMIVIETSLSGVQTRS 165
Query: 176 VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
V GL VPA + AW L++ Q VS LGHL GIL+G Y
Sbjct: 166 VFGLFNVPANWYAWILLVLFQFLASNVSLLGHLCGILSGFAY 207
>gi|212722872|ref|NP_001131556.1| uncharacterized protein LOC100192896 [Zea mays]
gi|194691838|gb|ACF80003.1| unknown [Zea mays]
gi|414872100|tpg|DAA50657.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 321
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P VT+ ++ +IYL + DS V E+ F P + + + RF+ S +H S
Sbjct: 23 PFVTSGVILICGVIYLLCLLIGYDSYV----EICFLPSAVASHFQVYRFYTSVLFHGSLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY-- 148
H+ +NM++L+ G +LE MGS +++ L + +L ++ Y Y+
Sbjct: 79 HVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNA----ILHLTIAFLVAYNPLYHVP 134
Query: 149 ---SEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSF 203
+E ++GFSGV+F+M V+ S S + +V GL VPA++ AW L++ Q VS
Sbjct: 135 NLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSL 194
Query: 204 LGHLGGILAGILY 216
LGHL GIL+G Y
Sbjct: 195 LGHLCGILSGFAY 207
>gi|414872102|tpg|DAA50659.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 390
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P VT+ ++ +IYL + DS V E+ F P + + + RF+ S +H S
Sbjct: 23 PFVTSGVILICGVIYLLCLLIGYDSYV----EICFLPSAVASHFQVYRFYTSVLFHGSLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY-- 148
H+ +NM++L+ G +LE MGS +++ L + +L ++ Y Y+
Sbjct: 79 HVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNA----ILHLTIAFLVAYNPLYHVP 134
Query: 149 ---SEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSF 203
+E ++GFSGV+F+M V+ S S + +V GL VPA++ AW L++ Q VS
Sbjct: 135 NLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSL 194
Query: 204 LGHLGGILAGILY 216
LGHL GIL+G Y
Sbjct: 195 LGHLCGILSGFAY 207
>gi|62733420|gb|AAX95537.1| Putative Rhomboid family protein [Oryza sativa Japonica Group]
Length = 393
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
S E+ F P ++ + RF+ S +H S H+ +NM++L+ G +LE MGS +
Sbjct: 41 SFAEICFLPSVVASRFQVYRFYTSVVFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFL 100
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYERAYY--SEYAVGFSGVLFAMKVVLNSRSEDYT-N 175
+ LL + I L+ L + ++ E ++GFSGV+F+M V+ S S T +
Sbjct: 101 MF-LLATTNAIFHLIIAFLAAYNPLYPLHFLVDECSIGFSGVIFSMIVIETSLSGVQTRS 159
Query: 176 VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
V GL VPA + AW L++ Q VS LGHL GIL+G Y
Sbjct: 160 VFGLFNVPANWYAWILLVLFQFLASNVSLLGHLCGILSGFAY 201
>gi|195627118|gb|ACG35389.1| rhomboid family protein [Zea mays]
Length = 396
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P VT+ ++ +IYL + DS V E+ F P + + + RF+ S +H S
Sbjct: 23 PFVTSGVILICGVIYLLCLLIGYDSYV----EICFLPSAVASHFQVYRFYTSVLFHGSLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY-- 148
H+ +NM++L+ G +LE MGS +++ L + +L ++ Y Y+
Sbjct: 79 HVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNA----ILHLTIAFLVAYNPLYHVP 134
Query: 149 ---SEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSF 203
+E ++GFSGV+F+M V+ S S + +V GL VPA++ AW L++ Q VS
Sbjct: 135 NLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSL 194
Query: 204 LGHLGGILAGILY 216
LGHL GIL+G Y
Sbjct: 195 LGHLCGILSGFAY 207
>gi|223942663|gb|ACN25415.1| unknown [Zea mays]
gi|414872103|tpg|DAA50660.1| TPA: rhomboid family protein [Zea mays]
Length = 396
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P VT+ ++ +IYL + DS V E+ F P + + + RF+ S +H S
Sbjct: 23 PFVTSGVILICGVIYLLCLLIGYDSYV----EICFLPSAVASHFQVYRFYTSVLFHGSLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY-- 148
H+ +NM++L+ G +LE MGS +++ L + +L ++ Y Y+
Sbjct: 79 HVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNA----ILHLTIAFLVAYNPLYHVP 134
Query: 149 ---SEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSF 203
+E ++GFSGV+F+M V+ S S + +V GL VPA++ AW L++ Q VS
Sbjct: 135 NLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSL 194
Query: 204 LGHLGGILAGILY 216
LGHL GIL+G Y
Sbjct: 195 LGHLCGILSGFAY 207
>gi|414872101|tpg|DAA50658.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 381
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P VT+ ++ +IYL + DS V E+ F P + + + RF+ S +H S
Sbjct: 23 PFVTSGVILICGVIYLLCLLIGYDSYV----EICFLPSAVASHFQVYRFYTSVLFHGSLL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY-- 148
H+ +NM++L+ G +LE MGS +++ L + +L ++ Y Y+
Sbjct: 79 HVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNA----ILHLTIAFLVAYNPLYHVP 134
Query: 149 ---SEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSF 203
+E ++GFSGV+F+M V+ S S + +V GL VPA++ AW L++ Q VS
Sbjct: 135 NLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSL 194
Query: 204 LGHLGGILAGILY 216
LGHL GIL+G Y
Sbjct: 195 LGHLCGILSGFAY 207
>gi|242033515|ref|XP_002464152.1| hypothetical protein SORBIDRAFT_01g013170 [Sorghum bicolor]
gi|241918006|gb|EER91150.1| hypothetical protein SORBIDRAFT_01g013170 [Sorghum bicolor]
Length = 396
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P VT+ ++ +IYL + S E+ F P + + + RF+ S +H S H+
Sbjct: 23 PFVTSGVVLICGVIYLLCLLIG--YDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF---FDYERAYYS 149
+NM++L+ G +LE MGS ++ LL + I L LV + F +
Sbjct: 81 LFNMLALVPLGTELERIMGSVRLLFLMF-LLATTNAILHLTIAFLVAYNPLFPVPN-LVN 138
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHL 207
E ++GFSGV+F+M V+ S S + +V GL VPA++ AW L++ Q VS LGHL
Sbjct: 139 ECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSLLGHL 198
Query: 208 GGILAGILY 216
GIL+G Y
Sbjct: 199 CGILSGFAY 207
>gi|358348102|ref|XP_003638088.1| hypothetical protein MTR_118s0012 [Medicago truncatula]
gi|355504023|gb|AES85226.1| hypothetical protein MTR_118s0012 [Medicago truncatula]
Length = 403
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 11/165 (6%)
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
S E+ F P ++ + R + + +H S H+ +NMM+L+ G +LE MGS +
Sbjct: 47 SFSEICFLPSAVVSRFQVYRIYTAILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYV 106
Query: 119 VVALLGMSQGI-----TLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDY 173
+ LL S I LL+A + +L Y +E A+GFSGVLF+M V+ S S
Sbjct: 107 TI-LLATSNAIIHVFIALLVAYNPILTNGY---LMNECAIGFSGVLFSMIVIETSLSGVQ 162
Query: 174 T-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
+ +V GL VPA++ A+ L++ Q+ + VS LGHL GI++G Y
Sbjct: 163 SRSVFGLFNVPAKWYAFFLLVVFQLLMQNVSLLGHLSGIVSGFAY 207
>gi|308806321|ref|XP_003080472.1| Rhomboid family proteins (ISS) [Ostreococcus tauri]
gi|116058932|emb|CAL54639.1| Rhomboid family proteins (ISS) [Ostreococcus tauri]
Length = 350
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVP----SIHEVWFNPHLILKYKDLKRFFLSPF 84
LP P++ A LAT T++ + L S V V P + + R + S F
Sbjct: 5 LPRPSPLSNAPLATTTIVVVMFVALASRVAIGANDFVGVCAVPKIAFHWTAYYRVYTSIF 64
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H + H+ +N ++ + G LE S+G+ FA + V ++ + LA L Y
Sbjct: 65 THGNLPHVIFNALAFVSTGGNLERSVGTFHFAWLFVTFAHVAYFASAALAWGLYFGLGYT 124
Query: 145 RAYYSEYAVGFSGVLFAMKVVLNSRSE-DYTNVHGLL-VPARYAAWAELIIIQMFVPGVS 202
+ + AVG SGV+FA+ V + ++ +V GL V + + A L++IQ+ +PGVS
Sbjct: 125 QGILT-CAVGMSGVIFALIVCETNYTDVGRRSVFGLFDVASEWYPLALLVLIQLMIPGVS 183
Query: 203 FLGHLGGILAGILYLK 218
FLGH GG++ G +Y+K
Sbjct: 184 FLGHAGGVVCGWMYVK 199
>gi|115454379|ref|NP_001050790.1| Os03g0651100 [Oryza sativa Japonica Group]
gi|62733419|gb|AAX95536.1| Putative Rhomboid family protein [Oryza sativa Japonica Group]
gi|113549261|dbj|BAF12704.1| Os03g0651100 [Oryza sativa Japonica Group]
Length = 222
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Query: 59 SIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
S E+ F P ++ + RF+ S +H S H+ +NM++L+ G +LE MGS +
Sbjct: 47 SFAEICFLPSVVASRFQVYRFYTSVVFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFL 106
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYERAYY--SEYAVGFSGVLFAMKVVLNSRSEDYT-N 175
+ LL + I L+ L + ++ E ++GFSGV+F+M V+ S S T +
Sbjct: 107 MF-LLATTNAIFHLIIAFLAAYNPLYPLHFLVDECSIGFSGVIFSMIVIETSLSGVQTRS 165
Query: 176 VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
V GL VPA + AW L++ Q VS LGHL GIL+G L+
Sbjct: 166 VFGLFNVPANWYAWILLVLFQFLASNVSLLGHLCGILSGYLW 207
>gi|294460477|gb|ADE75816.1| unknown [Picea sitchensis]
Length = 410
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P +T+ L+A +IYL + S + + F P ++ + R + S +H S H+
Sbjct: 23 PFITSGLVAVCGIIYLVCLLVG--YDSFYAICFWPAQLILRLQVYRIYTSVVFHGSVLHV 80
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY-SEY 151
+NMM+L+ G LE MGS + + + L + + LL+A + ++ E
Sbjct: 81 MFNMMALVPIGSGLERIMGSVRYLHVTLLLATCNAVLHLLIAYLAAHNPVHPYPFFMDEC 140
Query: 152 AVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGG 209
+GFSG++FAM V+ S + + + +V GL VP ++ A LI+ Q+ +P VS LGHL G
Sbjct: 141 TIGFSGIIFAMIVMETSLNGNQSRSVFGLFNVPGKWYASILLILFQLLMPNVSLLGHLCG 200
Query: 210 ILAGILY 216
IL+G Y
Sbjct: 201 ILSGFAY 207
>gi|412991448|emb|CCO16293.1| predicted protein [Bathycoccus prasinos]
Length = 388
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRF--- 79
F+ Y +LP T + N +L A L + S + P L+ L +F
Sbjct: 15 FSRYQQLPM---TTRCVFTINVFAFLFNAILR--LFSYSTLCLIPALMRGGDFLGQFYRI 69
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQ-LETSMGSNEFAAMVVALLGMSQGITLLLAKSLV 138
F S F H S HL NM + + G LE +GS FA ++V L + G T +L S +
Sbjct: 70 FTSAFTHGSFFHLLVNMCAFIQIGAYGLEMKLGSVNFA-LLVFLFTILCGTTHVLLASGM 128
Query: 139 LFFDYERAYYSEYAVGFSGVLFAMKVV----LNSRSEDYTNVHGLLVPARYA-AWAELII 193
+ Y +E AVGFSGV+F++ V+ N R D V GL V Y +A + I
Sbjct: 129 WYLLGMSGYQNECAVGFSGVIFSLVVLDTAFSNIRQRD---VFGLFVVNAYMYPFALIAI 185
Query: 194 IQMFVPGVSFLGHLGGILAGILYLK 218
+Q+ P SFLGHL G++ G LY+K
Sbjct: 186 VQLLAPNSSFLGHLSGVVVGSLYVK 210
>gi|413946849|gb|AFW79498.1| hypothetical protein ZEAMMB73_137499 [Zea mays]
Length = 132
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 11 SRGMLPLLALHAFNEYHRL-PWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHL 69
S GMLPLLAL EY R +PPVTAALLA N LIYLRP LD ++PS+ V FNP L
Sbjct: 18 SGGMLPLLALQVLIEYGRAGASRPPVTAALLAGNALIYLRPGALDGILPSVTRVSFNPRL 77
Query: 70 ILKYKDLKRFFLSPF-----YHASESHLFYNM 96
I++ +L ++ H S+SH +++
Sbjct: 78 IVEVPNLTYSSVAQLENEIPVHVSKSHPCFSV 109
>gi|226509028|ref|NP_001144460.1| uncharacterized protein LOC100277425 [Zea mays]
gi|195642488|gb|ACG40712.1| hypothetical protein [Zea mays]
Length = 150
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 7 GWRVSRGMLPLLALHAFNEY-HRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWF 65
G SRGMLPLLAL EY H +PPVT ALLA N+L+YLRP L ++PS+ V F
Sbjct: 14 GLEASRGMLPLLALQVIIEYGHAGASRPPVTVALLAVNSLVYLRPGALGGVLPSLARVSF 73
Query: 66 NPHLILK 72
NP LI++
Sbjct: 74 NPQLIIE 80
>gi|149016258|gb|EDL75504.1| hypothetical LOC316557, isoform CRA_a [Rattus norvegicus]
gi|149016260|gb|EDL75506.1| hypothetical LOC316557, isoform CRA_a [Rattus norvegicus]
Length = 187
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 152 AVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A WAEL I PG SF GHL GI
Sbjct: 11 AVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELAAIHFCTPGTSFAGHLAGI 70
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVL 240
L G++Y + PL I+ G+
Sbjct: 71 LVGLMYTQ--------GPLKKIMDACAGIF 92
>gi|405975233|gb|EKC39814.1| Serine/threonine-protein kinase RIO2 [Crassostrea gigas]
Length = 670
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTN-VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVGFSGV+FA+KV++ S T + G + VP++Y WAEL+ IQM P VSF+GHL G
Sbjct: 505 AVGFSGVIFALKVLVTHYSPSGTQYLMGFIPVPSKYIFWAELVFIQMITPNVSFVGHLAG 564
Query: 210 ILAGILYLK 218
IL G+LY K
Sbjct: 565 ILVGLLYTK 573
>gi|149016259|gb|EDL75505.1| hypothetical LOC316557, isoform CRA_b [Rattus norvegicus]
gi|149016261|gb|EDL75507.1| hypothetical LOC316557, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 152 AVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
AVGFSGVLFA+KV+ N + N+ G VP R+A WAEL I PG SF GHL GI
Sbjct: 11 AVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELAAIHFCTPGTSFAGHLAGI 70
Query: 211 LAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRF 246
L G++Y + PL I+ G + R+
Sbjct: 71 LVGLMYTQ--------GPLKKIMDACAGPSGYQNRY 98
>gi|168022284|ref|XP_001763670.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685163|gb|EDQ71560.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 214
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 13/188 (6%)
Query: 33 PPVTAALLATNTLIYLRPAFL--DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
P VTA ++ T IY+ DS + +V P I+ + R + S +HAS
Sbjct: 23 PCVTAGVVFLCTAIYVICLLFGYDSFI----QVCLLPKYIVDRVQVYRPYTSIVFHASIL 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF---FDYERAY 147
HL +NM++L G LE +GS + V+ ++ S + ++ L + Y
Sbjct: 79 HLVFNMLALAPIGSGLERILGSVRYLH-VLFIMATSNALIEVVIAYLAAYNPVHPYPGLM 137
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLG 205
Y E +GFSGV+F+M V+ S + T +V G VPA++ WA L++ Q+ +P S LG
Sbjct: 138 Y-ECGIGFSGVIFSMIVMETSLNPVQTRSVFGFFSVPAKWYPWALLVLFQLLMPRASLLG 196
Query: 206 HLGGILAG 213
HL GIL+G
Sbjct: 197 HLAGILSG 204
>gi|154421477|ref|XP_001583752.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121917995|gb|EAY22766.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 289
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 60 IHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMV 119
+ +++ NP L++K + R F S + HA HL NMM+ G E S+G+ F +
Sbjct: 35 MQKLYLNPFLVIKQNEYWRIFTSQYVHADIIHLAMNMMTFYQLGNFFERSVGTIAFFYYI 94
Query: 120 VALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSE-DYTNVHG 178
+S + L+A + + ++ AVGFSGVLF++ V+ ++ S +V G
Sbjct: 95 FIFGVLSNLLDCLIAWFMA--WGGRPEHFIGSAVGFSGVLFSLTVIDSAVSPGSQRSVMG 152
Query: 179 L-LVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYL 217
L LVP + WA L+ + + +P S LGH G++ G LY+
Sbjct: 153 LFLVPKDFYPWALLLFMSIIIPSASLLGHATGMVMGYLYI 192
>gi|299473184|emb|CBN78760.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 317
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
P I+ + R H H+ +NMMS L G LE + G+ ++ + ++
Sbjct: 45 PSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSSLEVAFGTLSLLFTILWSMILA 104
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPAR 184
+ + ++ ++ Y ++ +VGFSGV+F + ++ + RS T +V G++ VP R
Sbjct: 105 GVVHCGAEWVMTVWVTHDPTYVNQPSVGFSGVIFTLALMESYRSTQPTRSVFGMMRVPTR 164
Query: 185 YAAWAELIIIQMFVPGVSFLGHLGGILAGILYL 217
W L+++ +F+ +SF+GHL GIL G++++
Sbjct: 165 MYPWVLLVLLSVFMRDISFVGHLSGILVGVMHV 197
>gi|255080710|ref|XP_002503928.1| predicted protein [Micromonas sp. RCC299]
gi|226519195|gb|ACO65186.1| predicted protein [Micromonas sp. RCC299]
Length = 232
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
++ P +L+ + R F S +H S HL +NMM+ + LE +G+ +F ++V
Sbjct: 45 QICMAPSWVLRDGQVYRMFTSVLFHGSVLHLAFNMMAFVPMASSLERLLGTVQFTYILVL 104
Query: 122 LLGMSQGITLLLAKSLVLFFDYERAYYS--EYAVGFSGVLFAMKVV-LNSRSEDYTNVHG 178
++ + LA F Y S E A+GFSGV+F + VV + S ++ G
Sbjct: 105 FTLLASIFHVGLA-----FIGGTLGYPSMHECAIGFSGVIFGVIVVDTHLSSVAQRSIFG 159
Query: 179 LL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLK 218
VP+++ + LI +Q+ +P VSF+GHL G+LAG+ Y++
Sbjct: 160 FFTVPSQWYPLSLLIFLQVLMPSVSFVGHLSGLLAGLTYVR 200
>gi|145348648|ref|XP_001418758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578988|gb|ABO97051.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 351
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Query: 63 VWFNPHLILKY--KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
V +P L ++ R + S F H S H N ++ + LE S+G+ FA +
Sbjct: 44 VCASPRLAFEHPLSSYHRVWTSTFSHGSFPHALLNCLAFVPMASALERSIGTTHFAWLFA 103
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVV-LNSRSEDYTNVHGL 179
+ ++ A +L + Y RA Y A+G SGV+FA+ V N + +V GL
Sbjct: 104 TFAHAAYALSASAATALWMALGY-RASYESCAIGMSGVVFALIVCETNVNDVERRSVFGL 162
Query: 180 L-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLK 218
V + Y A L+ IQ+ +PGVSF+GH GGI AG LY++
Sbjct: 163 FTVSSEYYPIALLLFIQLLMPGVSFIGHAGGIAAGWLYVR 202
>gi|255082832|ref|XP_002504402.1| predicted protein [Micromonas sp. RCC299]
gi|226519670|gb|ACO65660.1| predicted protein [Micromonas sp. RCC299]
Length = 471
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 95/233 (40%), Gaps = 55/233 (23%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PP T A++A N ++ P D + + +V NP+ ++ L+R S F H HL
Sbjct: 78 PPGTLAIVAANVAVFSLP---DGV--AFGDVCLNPYAVIHLAQLERLVTSAFVHVDAFHL 132
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFD-----YERA- 146
NM +L G LE+ G+ F A LLG+SQ + L+ + F+ RA
Sbjct: 133 LSNMQGVLQDGSFLESLDGTPRFLARCATLLGLSQCTLVGLSWAERRFYQRGSSASRRAD 192
Query: 147 ----------------------------------------YYSEYAVGFSGVLFAMKVVL 166
+Y+ VGFSGV FA+KV
Sbjct: 193 AWLDDAVDRVSKYAYGGNSPGYHVPIRGTSSSSSAPKLLPFYNSGVVGFSGVNFALKVAA 252
Query: 167 NSR---SEDYTNVHGLLVPARYAAWAELIIIQMFVPGV-SFLGHLGGILAGIL 215
R + + VPARY+AW EL + + VP +F H G +AG++
Sbjct: 253 AHRRPANSVVLVGGLVPVPARYSAWFELALGTLIVPSAGTFAAHFAGTIAGLI 305
>gi|303271301|ref|XP_003055012.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462986|gb|EEH60264.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 231
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
P +L ++ R +PF+H S HL NM + + LE S+G+ +FA ++V L +
Sbjct: 48 PRHVLATGEVYRALTAPFFHGSLLHLALNMTAFVGTASGLERSLGTTQFA-LIVLLFALV 106
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSE-DYTNVHGLL-VPAR 184
+ + + A E A+G SG++F + VV S + +V G VP+
Sbjct: 107 AAAYHVALATAAALVGFTGAPM-ECAIGLSGIIFGLIVVDTHLSAIERRSVFGFFDVPSG 165
Query: 185 YAAWAELIIIQMFVPGVSFLGHLGGILAGILYLK 218
+ L+ IQ+ P VSFLGH G+LAG+ Y++
Sbjct: 166 WYPLGLLLFIQVIAPAVSFLGHAAGLLAGLTYVR 199
>gi|219112025|ref|XP_002177764.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410649|gb|EEC50578.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLS 82
FNE L P T ++A ++++ L L I + P L++ ++ R S
Sbjct: 4 FNEL--LQRTPQTTTGIIALCVILHVVTKVLLDLNLRIFTLC--PQLVIYRLEIYRIATS 59
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQ----GITLLLAKSLV 138
+H + HL NMM+ L G LE G+ +++ + ++ GI L LA +
Sbjct: 60 ALFHGNIMHLAMNMMTTLAIGSLLEKRFGTFRLLLIILWSILLTGILYIGIALFLAIII- 118
Query: 139 LFFDYERAYYSEYAVGFSGVLFAMKVVL-NSRSEDYTNVHGLL-VPARYAAWAELIIIQM 196
+ +++VGFSGV+F + V+ N + +V G VP+ W L+ +Q+
Sbjct: 119 ----QKNQLMRQHSVGFSGVIFHLSVLESNLGTHQSRSVFGFFDVPSYLYPWVLLVGLQI 174
Query: 197 FVPGVSFLGHLGGILAGILYL 217
F+PG+SF GHL GIL G L L
Sbjct: 175 FMPGLSFTGHLVGILVGTLQL 195
>gi|320168465|gb|EFW45364.1| hypothetical protein CAOG_03370 [Capsaspora owczarzaki ATCC 30864]
Length = 451
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 93/217 (42%), Gaps = 40/217 (18%)
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
+V F+ + + + L R +PF+HAS HL N MS +W E G+ E+
Sbjct: 109 QVTFSYAAVYERQQLSRIITAPFFHASLVHLLMN-MSAVWTCSFFEEERGTLEYMRATAL 167
Query: 122 LLGMSQGITLLLAKSLVLFFDY----ER--AYYSEYAVGFSGVLFAMKVVLNSRSEDYTN 175
L+G+S + L L LVL ++ ER +Y + +VG+SGV F + +L Y
Sbjct: 168 LIGLSAFVHLALTHCLVLHANWRGLVERRDSYRTCLSVGYSGVAFGLATLLGLAHPMYP- 226
Query: 176 VHGLLVP---ARYAAWA----ELIIIQMFVPGVSFLGHLGGILAGI-------------- 214
VP A + AW+ LI+ Q V S L H+ GI+AG+
Sbjct: 227 -----VPFLFANFPAWSAPLFNLILTQFLVRRASLLAHVSGIIAGVFLHFGGLDVVSNFA 281
Query: 215 ---LYLKLKGGYSGSD---PLTTIIRGATGVLSWPLR 245
L + GGY P + G VL PL+
Sbjct: 282 VFCLAAQFVGGYMLEHDMWPFENLADGPAAVLDLPLQ 318
>gi|403374294|gb|EJY87090.1| hypothetical protein OXYTRI_06350 [Oxytricha trifallax]
Length = 256
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 70 ILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGI 129
+L Y+ R S F H + +H+F+NM LL G+++E + G+ +A + L+ +S +
Sbjct: 15 VLDYQQFYRIVTSEFSHGNVAHIFFNMCGLLVFGVEVEKTYGTLYYAMINFWLMMISNIL 74
Query: 130 TL--LLAKSLVLFFDY----ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL-VP 182
+L + + V+ +Y + +Y VG+S +LF + ++ + + N GL
Sbjct: 75 SLAFFMLMAFVIPEEYRGGTQNFFYC--GVGYSNILFGLSIIFAYKGDTQQNFMGLCKFE 132
Query: 183 ARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGY 223
+Y W +I+I + SF+GH G++ G+L +K G Y
Sbjct: 133 KKYVPWFYMILIFFTIENSSFIGHFLGMITGLL-IKFGGLY 172
>gi|66813132|ref|XP_640745.1| hypothetical protein DDB_G0281359 [Dictyostelium discoideum AX4]
gi|60468764|gb|EAL66765.1| hypothetical protein DDB_G0281359 [Dictyostelium discoideum AX4]
Length = 343
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
+L R LS F H S H+ YNM++ L + G+ ++ ++ L G +
Sbjct: 79 DNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLF-LFG--------I 129
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVV-LNSRSEDYTNVHGLLVPARYAAWAELI 192
+L+ F Y + +GFSGVLFA+ + NS D + + +P++ WA LI
Sbjct: 130 ITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLI 189
Query: 193 IIQMFVPGVSFLGHLGGILAGILYLK 218
+ +FVP SF+GH GI+ GIL++K
Sbjct: 190 LAHVFVPRSSFIGHFSGIVVGILFIK 215
>gi|449015371|dbj|BAM78773.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 425
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
+P P L+ + TL++L L +P + V +P L + + R F +PF+H +
Sbjct: 25 IPSMPFGNLLLVGSCTLLFLCQQALQ--IP-LSAVCIDPELQIS-SNTYRLFTAPFFHVN 80
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKS------------ 136
H+F NM+ LL G LE +GS F +V ++ +S +LA S
Sbjct: 81 LVHIFANMIVLLDIGPPLERRLGSFLFLFIVFLMICVSGVFRAILAMSVRVALTPFEMST 140
Query: 137 ---LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSR--SEDYTNVHGLL-VPARYAAWAE 190
L+ Y R AVGFSGVLFA V+ + + D + G++ P+R+ A
Sbjct: 141 RAPLLPLLSYIRRQTHACAVGFSGVLFAFLVIHVHQFVATDILWILGVVPCPSRFYPLAL 200
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILYLK 218
L+++Q+ VP V GHL G+L G Y++
Sbjct: 201 LVLLQLMVPAVDLCGHLAGMLVGYTYVR 228
>gi|440800861|gb|ELR21891.1| peptidase, S54 (rhomboid) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 342
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
F P++I +++ + R + F+H H+ NM++ LE +MGS F+ +VV
Sbjct: 51 FPPNVIEQFQ-VYRLLTAGFFHVGFLHVVMNMLAFQALAPSLERAMGSFTFSYLVVLFQV 109
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VP 182
+S + L+ L Y A+ ++ +G S VLF+ V+ + + + ++ G + VP
Sbjct: 110 VSSLMNTFLSLVLYKTGAYPDAW-NQCTIGLSSVLFSFLVLRSHLHQSHNMSLFGFVSVP 168
Query: 183 ARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYL 217
A++ W L++ Q +P VSFLGHL GIL L++
Sbjct: 169 AQWYPWVLLVLFQFLMPEVSFLGHLTGILVAYLHV 203
>gi|290980876|ref|XP_002673157.1| rhomboid domain-containing protein [Naegleria gruberi]
gi|284086739|gb|EFC40413.1| rhomboid domain-containing protein [Naegleria gruberi]
Length = 296
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLF 93
P++ ++ NT+++ +F +PS V +N I+ K + R S F H S H+
Sbjct: 12 PLSFTIVLINTIVFFILSF--GRIPS-EFVSYNYDKIIGEKQVWRIVTSTFSHFSIIHIL 68
Query: 94 YNMMSLLWKGIQLE----TSMGSN------EFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
+N+ SL W Q+E ++GS+ E+ + LL S + LV F +
Sbjct: 69 FNLGSL-WGMRQVELIGQETLGSHSFHSVMEYFKITFLLLVFSTLFITVTYFCLVKFMKW 127
Query: 144 ERAYYSEYAVGFSGVLF---AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG 200
E Y VG+SGVLF M ++ N S +++ GL +P + LI+ QM +P
Sbjct: 128 EN-YRQVNIVGYSGVLFGMMTMSILQNGISSKGSSMFGLNLPNILMPFMSLILTQMLIPQ 186
Query: 201 VSFLGHLGGILAGIL 215
SF+GHLGGI+ +
Sbjct: 187 ASFVGHLGGIVGAFI 201
>gi|159475046|ref|XP_001695634.1| rhomboid-like protease [Chlamydomonas reinhardtii]
gi|158275645|gb|EDP01421.1| rhomboid-like protease [Chlamydomonas reinhardtii]
Length = 429
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 102/270 (37%), Gaps = 63/270 (23%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT AL A +L P L E +P+ +++ +++ R + S H HL
Sbjct: 126 PPVTLALTAAAVWRFLNPVML-------REWCLSPYCVVERREVGRLWRSGLVHLDAPHL 178
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALL-------------------------GMSQ 127
N+ +L+ LE A G+S
Sbjct: 179 LSNLAALIPDCAALERQHQRQHQQAGARGGGGGGGGGVEGALLPAAAFAADVAVLAGLSS 238
Query: 128 GITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTN-----VHGLLVP 182
G+ ++ A + YY+ AVG S + FA++V R E + GL VP
Sbjct: 239 GLFVVWAVAERQLLRRPGTYYAVGAVGLSSLAFALQVEAVVRGEARGPGARVWLLGLPVP 298
Query: 183 ARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSW 242
A +A A+L + + P SF GH+ G+LAG+ ++ L G VL W
Sbjct: 299 AAHAWLAQLALTHVTAPDASFAGHVAGVLAGVAHVYLVG----------------PVLRW 342
Query: 243 PLRFARYLFR--------RPRIYGRGTVGG 264
F R R +PR YG GT G
Sbjct: 343 --IFGRGRRRTAAGAGGAQPRFYGSGTTSG 370
>gi|167523737|ref|XP_001746205.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775476|gb|EDQ89100.1| predicted protein [Monosiga brevicollis MX1]
Length = 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 33 PPVTAALLATNTLIYLRP-AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PP T L NT+++L A L P I P I++ + R F H S H
Sbjct: 90 PPATLFLFGLNTVVHLDLLAPLGIYPPPIQASCLLPAAIVEGQAWLRLFWPVILHTSSYH 149
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-----MSQGITLLLAKSLVLFFDYERA 146
L+YNM+SLL+KG +LE +G+ E M+ AL G + G+ LL L F+D
Sbjct: 150 LYYNMVSLLYKGRKLEPRLGT-ERMLMLTALFGVGGNMLHTGLAYLL--HLAGFYD---- 202
Query: 147 YYSEYAVGFSGVLFAMKV 164
Y +VGFSGVLFA+K+
Sbjct: 203 SYVSCSVGFSGVLFALKL 220
>gi|395533706|ref|XP_003768895.1| PREDICTED: uncharacterized protein LOC100925524 [Sarcophilus
harrisii]
Length = 305
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 79 FFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV 138
L+P +H + HL N++ L G +LE S+G+ +++ L+ + T L +L
Sbjct: 161 LLLAPVHHENPWHLACNVVGLWLTGRRLELSVGT----GLLLVLMTSAALFTGFLHLALN 216
Query: 139 LFFDY---ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQ 195
L + E +Y ++ A+GFSGVLFAM+V+ S SE+ LV AE ++
Sbjct: 217 LAMEVTLQESSYRADCALGFSGVLFAMQVM--SSSENS------LVGNLLLCLAESLVAS 268
Query: 196 MFVPGVSFLGHLGGILAGILY 216
F P VSF GHL G+L G+ Y
Sbjct: 269 YFAPKVSFSGHLTGVLVGLAY 289
>gi|452824142|gb|EME31147.1| rhomboid domain-containing protein 1 [Galdieria sulphuraria]
Length = 337
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 23/202 (11%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFL--DSL--VPSIHEVWFNPHLILKYKDLKRFFLSP 83
P V+ +L + L+YL DS S+ +V+F+ + L F++P
Sbjct: 14 NFPGTTLVSGSLCSLVILLYLLQTITKTDSFFYCVSLEQVFFSYRVYL-------LFIAP 66
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG------ITLLLAKSL 137
H+S HL +N+++LL G +E+ GS + + + LL +S+ + + L
Sbjct: 67 LLHSSFWHLLFNVIALLGIGPVVESRKGSTLYGLLCLLLLLVSESLFLIFELLIYLQSRY 126
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR--YAAWAELIIIQ 195
+ FF ++ VGFSG+LFA+ V+ + T +P R + W L++IQ
Sbjct: 127 LFFFPISQSC----VVGFSGLLFALFVIDCIQVSVRTVQLFGRIPVRSNWIPWIFLLLIQ 182
Query: 196 MFVPGVSFLGHLGGILAGILYL 217
+PGVSFLGHL GI AG +Y+
Sbjct: 183 AILPGVSFLGHLSGIFAGYIYI 204
>gi|358342534|dbj|GAA49978.1| rhomboid domain-containing protein 1 [Clonorchis sinensis]
Length = 161
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 81 LSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF 140
+S F H +E H+++N+ + + +E +G + + L+ SQ I L L+
Sbjct: 1 MSHFCHLNEWHIYHNLTGFIRHAVWVEVLVGWRSALVVFLHLMVRSQ-ILHLFINHLLYI 59
Query: 141 FDYERAYYSEYAVGFSGVLFAMKVVLNSRSE-----DYTNVHGLLVPARYAAWAELIIIQ 195
+ AY + +G SG++FA+ V+ N + TN +P AW +L +IQ
Sbjct: 60 LTEDEAYSKDCFIGISGLVFAINVLSNLSMKGTWEFQLTNGRIFRIPKAAIAWGDLFLIQ 119
Query: 196 MFVPGVSFLGHLGGILAGILY 216
VP S +GHL G+ AG+ Y
Sbjct: 120 FPVPTSSLVGHLAGVFAGLSY 140
>gi|307109842|gb|EFN58079.1| hypothetical protein CHLNCDRAFT_142374 [Chlorella variabilis]
Length = 727
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 9 RVSRGMLPLLA--LHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIH----E 62
R SRG++P L Y L P T+AL T+ Y +L+ H +
Sbjct: 433 RRSRGIIPFWPSMLAKLTGYQAL--AQPATSALALLLTVAY-------ALIQWRHLGYPD 483
Query: 63 VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL 122
V + ++ +++L R S H HL +N+ S LW +E ++G+ + L
Sbjct: 484 VGLSYDRVVVHRELWRTAASQLAHIDLVHLAFNL-SALWSIGLVERTLGTLHYLQHTALL 542
Query: 123 LGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFA-MKVVLNSRSEDYT--NVHGL 179
+S I +L+ L++ E+ Y AVG+S VLF M ++ S+ T V GL
Sbjct: 543 FLLSPAICILIYHLLIVVGQREQ-YREVTAVGYSCVLFGWMSLMATSKPGGITMLPVFGL 601
Query: 180 L-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDP 228
+P WA L+I + +P SF+GHL G+LAG Y G +S +P
Sbjct: 602 ASIPLWATPWASLLITSLLIPRASFVGHLAGMLAG--YAVALGAFSWLNP 649
>gi|441432485|ref|YP_007354527.1| Integral membrane protein [Acanthamoeba polyphaga moumouvirus]
gi|371944779|gb|AEX62601.1| putative rhomboid protein [Moumouvirus Monve]
gi|440383565|gb|AGC02091.1| Integral membrane protein [Acanthamoeba polyphaga moumouvirus]
Length = 177
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
++ +FL FYHA+ HL N +SL + LE MG +FA + + + + I L +
Sbjct: 39 NEIINYFLRTFYHANLEHLLANSISL-YSLSFLEDLMGHKQFA-LAIIFIWIVSSIILYI 96
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+L+ Y VGFSGV+F + V+ Y G V I+
Sbjct: 97 IHALI-------PSRKVYTVGFSGVIFGLIVI-------YYMSLGQGVGITLTGLVVSIL 142
Query: 194 IQMFVPGVSFLGHLGGILAGILYLKL 219
Q+ +PG+SF GHL GI+AGI+Y+ L
Sbjct: 143 PQLVIPGISFEGHLSGIIAGIIYIML 168
>gi|281204487|gb|EFA78682.1| methionyl-tRNA synthetase beta subunit [Polysphondylium pallidum
PN500]
Length = 400
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
S F H+ H+ +NM S IQL++ +N ++ MS I L++ +
Sbjct: 104 SAFTHSGILHILFNMSSF----IQLKSLESTNVLVSL------MSFAIAFLISYPPL--- 150
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL-VPARYAAWAELIIIQMFVPG 200
+Y + Y+ +VG SGV+FA+ + S TN+ + +P + WA L++ Q +P
Sbjct: 151 NYMNSLYT-CSVGLSGVIFALLEIQCYGSIHSTNLFAQIQIPLKLYPWAALLLAQFLMPN 209
Query: 201 VSFLGHLGGILAGILY 216
VSF+GHL GI+ G LY
Sbjct: 210 VSFIGHLSGIIIGFLY 225
>gi|330801370|ref|XP_003288701.1| hypothetical protein DICPUDRAFT_98105 [Dictyostelium purpureum]
gi|325081264|gb|EGC34786.1| hypothetical protein DICPUDRAFT_98105 [Dictyostelium purpureum]
Length = 382
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 62 EVWFNPHLILKY--KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETS-MGSNEFAAM 118
+V +P+ +L + + S ++H + H+ +NM++ + G +LE S G+ +F +
Sbjct: 63 QVCLSPYYLLSHPLSNAYTIITSNYFHINILHILFNMLAFIPLGSRLEKSKFGTLQFFYL 122
Query: 119 VVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHG 178
+V + +T +L+ + L+ + R Y +VGFSG++F++ + + + +++G
Sbjct: 123 IVLFSILIPLMTTVLSV-IGLYTNITRFGYYSCSVGFSGIVFSL-LEIEFFEDRLVSLYG 180
Query: 179 LL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLK 218
+ +P++ +A L I + P SFLGHL GI G+L++K
Sbjct: 181 ITNIPSKLYPFAILFITYLIFPSSSFLGHLSGIFVGLLFVK 221
>gi|452820434|gb|EME27476.1| hypothetical protein Gasu_49270 [Galdieria sulphuraria]
Length = 357
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R F++P+++ S + + + + LE +GS F ++V+ +G+ T LL +L
Sbjct: 87 RVFVAPWFYHSAAEFASSAFAWCFIAGPLEKLLGSLRFLSIVLWFVGL----TGLLYITL 142
Query: 138 VLFFD-YERAYYSEYAVGFSGVLFAMKVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQ 195
LFF + + + +G S VLFA+ V+ SR E + L VP+ W LI+ Q
Sbjct: 143 GLFFSKFHWSLPEDCVLGISNVLFALLVLAFSRFEFSLATLRDLPVPSWSFPWMILIVCQ 202
Query: 196 MFVPGVSFLGHLGGILAGILYL 217
+P FLGHL G+LAG L++
Sbjct: 203 AMIPSSPFLGHLSGVLAGTLFV 224
>gi|363540224|ref|YP_004894693.1| mg642 gene product [Megavirus chiliensis]
gi|448825630|ref|YP_007418561.1| putative rhomboid protein [Megavirus lba]
gi|350611389|gb|AEQ32833.1| putative rhomboid protein [Megavirus chiliensis]
gi|425701565|gb|AFX92727.1| putative rhomboid protein [Megavirus courdo11]
gi|444236815|gb|AGD92585.1| putative rhomboid protein [Megavirus lba]
Length = 163
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 35 VTAALLATNTLIYLRPA-FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLF 93
VT LL +IY PA F D+ +L + L +YHA+ HL
Sbjct: 4 VTYILLLIMVVIYFSPANFYDT-----------------SNELVNYSLRTYYHANIEHLI 46
Query: 94 YNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE-RAYYSEYA 152
N +SL + LE +G +FA + I + L S++L+ + Y
Sbjct: 47 ANSISLYYLSF-LEDLLGHTQFAIAI---------IFIWLVSSMILYIIHAIMPSRKVYT 96
Query: 153 VGFSGVLFAMKVV--LNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
VGFSGV+F + V+ + + GL++ I+ Q+ VPG+SF GHL GI
Sbjct: 97 VGFSGVIFGLIVIYYFSLNQNPGITMTGLIIS---------ILPQLVVPGISFEGHLSGI 147
Query: 211 LAGILYLKL 219
+AG++Y+ L
Sbjct: 148 IAGVIYVTL 156
>gi|451927292|gb|AGF85170.1| membrane protein [Moumouvirus goulette]
Length = 165
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
++ + L FYHA+ HL N +SL + LE MG +FA M + + + I L +
Sbjct: 27 NEIINYLLRTFYHANLEHLLANSISL-YSLSFLEDLMGHKQFA-MAIIFIWIVSSIILYI 84
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVV--LNSRSEDYTNVHGLLVPARYAAWAEL 191
+L+ Y VGFSGV+F + V+ ++ + GL+V
Sbjct: 85 IHALI-------PSRKVYTVGFSGVIFGLIVIYYMSLGQGAGITLTGLVVS--------- 128
Query: 192 IIIQMFVPGVSFLGHLGGILAGILYLKL 219
I+ Q+ +PG+SF GHL GI+AG++Y+ L
Sbjct: 129 ILPQLVIPGISFEGHLSGIIAGLIYITL 156
>gi|371944005|gb|AEX61833.1| putative rhomboid protein [Megavirus courdo7]
Length = 152
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
+L + L +YHA+ HL N +SL + LE +G +FA + I + L
Sbjct: 16 NELVNYSLRTYYHANIEHLIANSISLYYLSF-LEDLLGHTQFAIAI---------IFIWL 65
Query: 134 AKSLVLFFDYE-RAYYSEYAVGFSGVLFAMKVV--LNSRSEDYTNVHGLLVPARYAAWAE 190
S++L+ + Y VGFSGV+F + V+ + + GL++
Sbjct: 66 VSSMILYIIHAIMPSRKVYTVGFSGVIFGLIVIYYFSLNQNPGITMTGLIIS-------- 117
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILYLKL 219
I+ Q+ VPG+SF GHL GI+AG++Y+ L
Sbjct: 118 -ILPQLVVPGISFEGHLSGIIAGVIYVTL 145
>gi|66819575|ref|XP_643447.1| hypothetical protein DDB_G0275611 [Dictyostelium discoideum AX4]
gi|60471600|gb|EAL69556.1| hypothetical protein DDB_G0275611 [Dictyostelium discoideum AX4]
Length = 458
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 118 MVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVH 177
M L+ M I L+A + D +YYS +VGFSG +FA+ + ++ +++ +++
Sbjct: 229 MTSVLISMMNFILSLVA----YYLDIGYSYYS-CSVGFSGCIFAL-LTIHCFNDNLVSLY 282
Query: 178 GLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYL 217
G+ +P++ WA LII +P SF+GHL GIL G LY+
Sbjct: 283 GITRIPSKLYPWAILIITNFILPMTSFVGHLSGILIGTLYM 323
>gi|303290999|ref|XP_003064786.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453812|gb|EEH51120.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 370
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 81/201 (40%), Gaps = 48/201 (23%)
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSL----------LWKGIQLETSMG 111
+V NP+ +L L+R S F H HL NM L + G +E+ G
Sbjct: 168 DVCLNPYAVLHMNQLERVVTSAFVHRDLFHLLNNMTGLGAFSVFSHCTVEDGSYVESRDG 227
Query: 112 SNEFAAMVVALLGMSQGITLLLA------------KSLVLFFDYERA------------- 146
F A LL +SQG + L+ + + D
Sbjct: 228 VGSFLAQTALLLVLSQGALVTLSWAERKLTGRGGSRGASGWIDDALGGLTTTTTTTTRRS 287
Query: 147 ---------YYSEYAVGFSGVLFAMKVVLNSRSEDYTNV--HGLL-VPARYAAWAELIII 194
+YS VGFSGV +A+KVV + R + V G+L VPARY+ W EL +
Sbjct: 288 GGGGAETLPFYSSGVVGFSGVNYALKVVASHRRPLGSRVLLLGVLPVPARYSFWCELALN 347
Query: 195 QMFVPGV-SFLGHLGGILAGI 214
+ +P +F H G +AG+
Sbjct: 348 TLLMPSSGTFAAHFAGCVAGL 368
>gi|147773437|emb|CAN73436.1| hypothetical protein VITISV_006399 [Vitis vinifera]
Length = 353
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 72/155 (46%), Gaps = 36/155 (23%)
Query: 97 MSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY--SEYAVG 154
M+L+ G +LE MGS M+V LL S I +L SLV + + +Y +E A+G
Sbjct: 1 MALVPLGSELERIMGSVRLFYMIV-LLATSNAIFHVLIASLVAYNPFYSYHYLMNECAIG 59
Query: 155 FSGVLFAMKVVLNSRSEDYT-----------NVHGLLV------------------PARY 185
FSG+LF+M V+ S S T NV LV PAR
Sbjct: 60 FSGILFSMIVIETSLSGAQTRRIFAETVISANVVNSLVSADAWELRICNLSVESCAPARL 119
Query: 186 A----AWAELIIIQMFVPGVSFLGHLGGILAGILY 216
AW L++ Q+ + VS LGHL GIL+G Y
Sbjct: 120 DVHMYAWILLVVFQLLMTNVSLLGHLCGILSGFAY 154
>gi|320168488|gb|EFW45387.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 327
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 73 YKDLK---RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGI 129
Y+DL R F H H+ NMM+ + E + GS A +++ L G
Sbjct: 58 YRDLTQPWRLFTHMLIHEQLWHIVLNMMTFVPLAAASERAHGS--IALVLLLLELSLLGE 115
Query: 130 TLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHG-------LLVP 182
+ +A + +L A Y ++G SGV+F++ V+ R+ + + + VP
Sbjct: 116 LVHVAIAALLLAAGFPAAYYTTSIGMSGVIFSLLVISIHRTANASAANEQRSLCAIFTVP 175
Query: 183 ARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
+ WA L++IQ F+P VSFLGHL GIL G L+
Sbjct: 176 SSVYPWALLLVIQAFIPSVSFLGHLSGILVGYLF 209
>gi|168005315|ref|XP_001755356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693484|gb|EDQ79836.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 272
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSN-------EFAAMVVALLGMSQGIT 130
RF S F H S HL +NM S LW +E+ N ++ ++V L G+
Sbjct: 54 RFITSAFSHISFLHLVFNM-SALWSLGVVESFNDYNLGTAYYIQYTTILVLLSGL----- 107
Query: 131 LLLAKSLVLFFDYERAYYSEY-AVGFSGVLFAMKVVLNSRSEDYT-NVHGLL-VPARYAA 187
++L VL + YY AVG+S V+F +L R N+ GLL +P A
Sbjct: 108 MVLGMYHVLITRAKLEYYRRVTAVGYSCVVFGWMTILAVRQPSLKLNLFGLLSLPISLAP 167
Query: 188 WAELIIIQMFVPGVSFLGHLGGILAGIL 215
+ LI + VP SFLGHL GIL G L
Sbjct: 168 FESLIFTSIIVPQASFLGHLAGILVGYL 195
>gi|219126331|ref|XP_002183413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405169|gb|EEC45113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 687
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAA----MVVALLGMSQGITLLLAKSLVLFF 141
H HLF+NM +L G +LE++ GS ++++ M A L + I LL ++L F
Sbjct: 284 HFETWHLFFNMQALYSLGSELESNDGSTKYSSVTFFMYTASLVLWTTIFWLLLETLKRRF 343
Query: 142 DYER---AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPA-------------RY 185
+ A VGFSGVLFA VV + VH +P+ +
Sbjct: 344 ESAMSPVASGDSPTVGFSGVLFAWMVVASLEQSQTCPVH--FLPSLCFVTHEFVGFRFNF 401
Query: 186 AAWAELIIIQMFVPGVSFLGHLGGILAGI 214
A +L I Q+ +P VS GHL GIL+G+
Sbjct: 402 APLVQLGIAQVLLPRVSLTGHLAGILSGL 430
>gi|326432288|gb|EGD77858.1| hypothetical protein PTSG_09492 [Salpingoeca sp. ATCC 50818]
Length = 433
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 9/190 (4%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
P VT ++ L ++ A ++P++ P + Y L R F H + H
Sbjct: 13 PLVTRVVVVFQLLGFIIGASFPQVIPAL---CLQPATAIMYFQLHRLFTYAVIHRNLIHF 69
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV-LFFDYERAYYSEY 151
NM+ LL +LETSMGS +A M +A+ + +T + +L L ++++
Sbjct: 70 VLNMIGLLMVSSRLETSMGSVRYAHMFLAMTAVV-AVTYCMGAALAYLIVGINFSFWNIC 128
Query: 152 AVGFSGVLFAMKVV---LNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLG 208
+G + L M V+ S S +V+GL +P LI F+P SF +
Sbjct: 129 TIGLTSPLLTMAVIYVYCFSTSSSVISVYGLQMPPTILPPLMLICTH-FLPTTSFWCNFT 187
Query: 209 GILAGILYLK 218
G++ G +Y++
Sbjct: 188 GLVMGYMYVQ 197
>gi|452822090|gb|EME29113.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
Length = 195
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLF 93
PVT ++A +++L + S ++V N ++ K+ R+ S H S HL
Sbjct: 19 PVTCLVIAICIIVWLVITYKG---WSYYDVGCNYDCVIVDKETWRWISSTLSHISLMHLI 75
Query: 94 YNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAV 153
NM SL W +E +GS + V + +S +TL + + F E+ + Y V
Sbjct: 76 LNMYSL-WNLSWMEQRLGSLVYLTWNVVIAFLSTCVTLFINYLQLTVFHSEQVRHV-YLV 133
Query: 154 GFSGVLFAMKVVLNS--RSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
G+S VLF + V+ + + + +L+ + + L ++ + VP SF+GH GIL
Sbjct: 134 GYSAVLFGLFVIASQHIKVARIWILDEVLISPIWIPFISLGVVTLLVPEASFVGHCSGIL 193
Query: 212 AG 213
G
Sbjct: 194 IG 195
>gi|302853316|ref|XP_002958174.1| hypothetical protein VOLCADRAFT_99376 [Volvox carteri f.
nagariensis]
gi|300256535|gb|EFJ40799.1| hypothetical protein VOLCADRAFT_99376 [Volvox carteri f.
nagariensis]
Length = 373
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 24 NEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSP 83
N Y+ LP T +L+ ++ L + S ++ V PH +L + RFF +
Sbjct: 37 NWYNGLPLCTKATFSLIMGIFIVQLLTGWYGSQSTAVSLV---PHAVLYDYQVYRFFTAV 93
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
H H+ +NM++ + G LE + G+ + ++ L +G+ + L+
Sbjct: 94 LVHGGLLHVTFNMLAFVPIGASLERAAGTWQLLHFML-LSCFLEGVIYAVVSGLLAASGL 152
Query: 144 ERAYYSEYAVGFSGVLFAMKV-----VLNSRSEDYTNVHGLL-VPARYAAWAELIIIQMF 197
AVGFSGV+F + V + +S S + ++ GL VPA + W L++ Q+
Sbjct: 153 VHGALFHGAVGFSGVIFGLLVWDSALLSSSSSSSHRSIFGLFHVPAPWYPWVLLLLCQLM 212
Query: 198 VPGVSFLGHLGGILAGILYL 217
+P S LGHL G+L G L++
Sbjct: 213 LPEASLLGHLAGLLVGQLWV 232
>gi|359425053|ref|ZP_09216156.1| rhomboid family protein [Gordonia amarae NBRC 15530]
gi|358239633|dbj|GAB05738.1| rhomboid family protein [Gordonia amarae NBRC 15530]
Length = 299
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 33 PPVTAALLATNTLIYL----RPAFLDSLVPSIHEVW--FNPHLILKYKDLKRFFLSPFYH 86
P VT L+A N L+++ + D L S+ W F P + + R + F H
Sbjct: 73 PYVTYGLIAFNVLVFVICVGQAGGTDMLNSSLFTDWALFKP--FVHDGEYWRLLTAGFLH 130
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
S +H+ NM+SL G LE ++G +A + +A L +L A L + A
Sbjct: 131 FSLTHIAANMLSLFLLGRDLELAIGYPRYAGVYLASLVGGSAAVMLFAGDLTINAGASGA 190
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGH 206
Y G G + + + + + ++ GL I++ + VPG+S H
Sbjct: 191 IY-----GLMGAMLVIVLRMRASPVPVLSIIGL-----------NIVLSITVPGISLAAH 234
Query: 207 LGGIL------AGILYLKLKGGYSGSDP 228
LGG+L AG++YL G G P
Sbjct: 235 LGGLLFGALATAGLIYLPQVAGDRGRTP 262
>gi|169347291|ref|ZP_02866229.1| hypothetical protein CLOSPI_00006 [Clostridium spiroforme DSM 1552]
gi|169293908|gb|EDS76041.1| peptidase, S54 family [Clostridium spiroforme DSM 1552]
Length = 214
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 32 KPPVTAALLATNTLIY----LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
K P+T+ ++ ++Y L+ ++ I FNP L++ KD R + F H
Sbjct: 7 KYPITSVVIGICMIVYIYTTLKYGIEMNVYQGIESGGFNPILVIHLKDYYRLITANFIHF 66
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H+F N SLL G +E +G +A +++A S T + +L L +
Sbjct: 67 GLMHIFCNCYSLLNFGSVMEYLLGQKRYAIVMIA----SMFATTIFPCALYLI---NGSG 119
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHL 207
+ G SG +F + L + + ++ +V+ + ++ +++I VP +S +GH+
Sbjct: 120 ANSVMGGISGAIFGLMGALLALAMEFKSVYAYVFKQIASSVILMLLISFLVPSISLVGHV 179
Query: 208 GGILAGILYLKL 219
G++ G + + L
Sbjct: 180 SGMIGGFIAMLL 191
>gi|297570706|ref|YP_003696480.1| rhomboid family protein [Arcanobacterium haemolyticum DSM 20595]
gi|296931053|gb|ADH91861.1| Rhomboid family protein [Arcanobacterium haemolyticum DSM 20595]
Length = 210
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 25/187 (13%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK--RFFLSPFYHASES 90
PPVTA + A + L VP EV F+ I + + + RF F H+
Sbjct: 25 PPVTAVMSALCIIATLA----SYAVP---EVLFSYAFIPLFAEAEPWRFLTGAFLHSGFM 77
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
H+ +N+M+L++ G +LE ++ S FAA+ LG + G + V + ++
Sbjct: 78 HILFNVMALIFLGAELEPALKSGRFAALY---LGSAIG-----GNAAVYAWSAWTGEWNT 129
Query: 151 YAVGFSGVLFAM--KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLG 208
AVG SG +F + +++ +R+ +T++ G+L+ A +I + P +S+ HLG
Sbjct: 130 AAVGASGAIFGLFGALIVLTRAL-HTDMRGILILLGINA-----LIAITTPQISWQAHLG 183
Query: 209 GILAGIL 215
G L GI+
Sbjct: 184 GFLTGII 190
>gi|397569632|gb|EJK46866.1| hypothetical protein THAOC_34449 [Thalassiosira oceanica]
Length = 246
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 103 GIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAM 162
G LE +G+ A + + ++ I + ++ L F E+ ++A GFSGV+F +
Sbjct: 4 GSSLERQIGTIMMALTIFFGILLTGAIYISISWLLFAVFGLEKMML-QHAAGFSGVIFQL 62
Query: 163 KVVLNSRSEDYT-NVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
V+ ++ S + T +V G+ V +R WA L+ IQ+ +P +SFLGHL GIL G L
Sbjct: 63 SVLESNLSPNRTRSVFGVFTVSSRMYPWALLVAIQLVMPHISFLGHLSGILIGSL 117
>gi|402584901|gb|EJW78842.1| hypothetical protein WUBG_10251 [Wuchereria bancrofti]
Length = 153
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 17 LLALHAFNEYHRLPWKPPVTAALLATNTLIYL-RPAFLDSLVPSIHEVWFNPHLILKYKD 75
LLA FN + PPVT A++ I+L FL + P IL +
Sbjct: 17 LLAYQLFNS----RYIPPVTLAVIIFQMAIFLGYFPFLGQ--HRTEAMCLLPSRILYRSE 70
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R S H + HL++NM+SLLWKG +LE +GSN F +++A+ ++ T++
Sbjct: 71 WLRMLASTVMHVDDMHLYFNMISLLWKGRRLEPWLGSNRF-LLLLAVFAVATNCTMVGLS 129
Query: 136 SLV--LFFDYERAYYSEYAVGFSG 157
L +F Y ++ AVGFSG
Sbjct: 130 YLADEVFSFNGGGYMNQCAVGFSG 153
>gi|227549462|ref|ZP_03979511.1| S54 family peptidase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078461|gb|EEI16424.1| S54 family peptidase [Corynebacterium lipophiloflavum DSM 44291]
Length = 197
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 63/143 (44%), Gaps = 27/143 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLAKS 136
R + F H SHLF NM+ L+ G ++E +G+ F A VV L S +
Sbjct: 63 RLLTAGFLHLDLSHLFVNMLMLVLIGGEIERFIGTARFVVAWVVGTLASSAAV------- 115
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNS----RSEDYTNVHGLLVPARYAAWAELI 192
L + FD A G SG LFA+ VL + RS D LLV +
Sbjct: 116 LAMAFDTPTA-------GASGALFALLAVLVAIAYRRSSDLRAPIALLVLN--------V 160
Query: 193 IIQMFVPGVSFLGHLGGILAGIL 215
PGVS GHLGG+ AGIL
Sbjct: 161 AFTFIAPGVSVWGHLGGLAAGIL 183
>gi|255080834|ref|XP_002503990.1| predicted protein [Micromonas sp. RCC299]
gi|226519257|gb|ACO65248.1| predicted protein [Micromonas sp. RCC299]
Length = 183
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLF 93
P+T+ ++A + ++ FL+S EV + +++ ++ R + F H S HL
Sbjct: 1 PITSLVIALCSGVWY---FLNSKGLGYEEVGVSYAKVVRDREYWRCLTASFSHISPLHLL 57
Query: 94 YNMMSLLWKGIQLET-----SMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
+NM SL G+ + GS + + +L + + +L LV +ER Y
Sbjct: 58 FNMSSLWSLGVVEQMRGRGEGWGSGWYVRYTLVMLVGTMALVILSYHVLVRM-GHER-YE 115
Query: 149 SEYAVGFSGVLFAMKVVLNSR--SEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGH 206
AVG+S V+F VL+ R + + + + +P A + LI + VP SF+GH
Sbjct: 116 RVTAVGYSCVVFGWMTVLSVRQPTSSLSLLGYIQLPVNLAPFGSLIFTSVVVPQASFVGH 175
Query: 207 LGGILAG 213
L GI+ G
Sbjct: 176 LAGIVVG 182
>gi|300120076|emb|CBK19630.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 152 AVGFSGVLFAMKVVLNSRSE-DYTNVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGG 209
A GFSGV+F++ +V+ + D ++ GL VP ++ A LI++ + +PGVSF+GHL G
Sbjct: 35 AAGFSGVIFSLLLVMTYVIDVDTLSIFGLFSVPRKWYAIIYLILMSVLIPGVSFIGHLCG 94
Query: 210 ILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLR 245
IL+G YL + G + + P+ ++ G + L+
Sbjct: 95 ILSG--YLFVFGYLNWAIPMHCLVAMEKGFIGSVLK 128
>gi|405979365|ref|ZP_11037709.1| hypothetical protein HMPREF9241_00432 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404392746|gb|EJZ87804.1| hypothetical protein HMPREF9241_00432 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 284
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHE-VWFNPHLILKYKDLKRFFLSPFYHASES 90
+P VT L+ N +++ L ++P + ++FNP + Y+ + RF + F H+
Sbjct: 66 QPVVTYTLIGINVALFI----LSFVLPLVGNWLFFNPAV--GYRQVWRFLTTAFLHSGFM 119
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
H+ +NM++L G++LE +G + + V LL +LA L+ + +
Sbjct: 120 HIAFNMLALYSVGVELEQVLGRTRY--LSVYLLSAIGASLFVLAWVLI-----QPSSLGT 172
Query: 151 YAVGFSGVLFAM---KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHL 207
VG SG +F + VL +S G+ A ++I VP VS+ GH+
Sbjct: 173 VTVGASGAVFGLFGAMFVLQKQS-------GMDTRAVVGLLLVNLLIGFIVPNVSWQGHV 225
Query: 208 GGILAGIL 215
GG+ G L
Sbjct: 226 GGLATGAL 233
>gi|290999042|ref|XP_002682089.1| rhomboid domain-containing protein [Naegleria gruberi]
gi|284095715|gb|EFC49345.1| rhomboid domain-containing protein [Naegleria gruberi]
Length = 368
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
+ F PF+H S +H+ +NM++L G ++E+++G+ F + + ++ + + +
Sbjct: 126 QLFTFPFFHGSITHILFNMLALYQFGNRIESTLGTIYFFFISLFMIIFGSAVWVAIDALF 185
Query: 138 VLFFDYERA---YYSEYAVGFSGVLFAMKV-VLNSR---SEDYTNVHGLLVPARYAAWAE 190
+ F + VG+SGVLF V + R + Y + + W
Sbjct: 186 IQGFGAGQTLSFLLDRCTVGYSGVLFGYLVFTVQYRPLFEQLYPGANADDFAPKLIPWLM 245
Query: 191 LIIIQMFVPGVSFLGHLGGILAGIL 215
LI+ + +P VS +GHL G+++G L
Sbjct: 246 LIVTSLLMPNVSLMGHLTGMISGYL 270
>gi|227494200|ref|ZP_03924516.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
gi|226831934|gb|EEH64317.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
Length = 309
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 42 TNTLIYLRPA--FLDSLVPSIHE-VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMS 98
TN +I + A L L+P++ ++FNP IL YK+ RF H HL NM S
Sbjct: 96 TNVIIAITVATSLLAMLIPAVGNFLFFNP--ILGYKEPWRFLTVMLVHGGLIHLALNMYS 153
Query: 99 LLWKGIQLETSMGSNEFAAMVVAL-LGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSG 157
L G LE +G+ + A+ VA LG S + L SL F+ VG SG
Sbjct: 154 LYLVGNSLERVLGTYRYLALYVASGLGGSLAVLLWAMVSLDSFY--------HVTVGASG 205
Query: 158 V---LFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGI 214
LFA V+ +S G+L+ A + + VS+ GHLGG++ G
Sbjct: 206 AIFGLFAAVYVVQRKSGMDARAMGILLAVNLA-------LGFTISNVSWQGHLGGMIVGA 258
Query: 215 L 215
L
Sbjct: 259 L 259
>gi|326432618|gb|EGD78188.1| hypothetical protein PTSG_09065 [Salpingoeca sp. ATCC 50818]
Length = 224
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 165 VLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKL 219
+ R + + + G+ VP +YA W EL++IQ+ P S LGHL GIL G+ Y ++
Sbjct: 3 ATDPRGDGSSFILGMRVPTKYAYWVELLVIQVIAPQSSLLGHLCGILVGLAYARV 57
>gi|377572160|ref|ZP_09801257.1| hypothetical protein GOTRE_152_00160 [Gordonia terrae NBRC 100016]
gi|377530656|dbj|GAB46422.1| hypothetical protein GOTRE_152_00160 [Gordonia terrae NBRC 100016]
Length = 237
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 30 PWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK-----RFFLSPF 84
P +P T AL+A N LI+ + F+ +LK D+ R + F
Sbjct: 8 PTQPYATYALIAVNLLIFALCVLQAGVGDPGGASIFSAGDLLK-SDVAAGEYWRLLTAGF 66
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
H S H+ NM+SL G LE ++G + A+ V+ALLG S V+ F+
Sbjct: 67 LHFSVMHVAVNMLSLYILGRDLELALGIGRYLAVYVIALLGGSAA---------VMLFEN 117
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV----- 198
+RA + + G++ AM V++ + AR + L+II V
Sbjct: 118 DRALTAGASGAIYGLMGAMLVII--------------LKARVSPVPVLLIIGFNVVLSFS 163
Query: 199 -PGVSFLGHLGGILAG 213
PG+S LGHLGG++ G
Sbjct: 164 LPGISVLGHLGGLVFG 179
>gi|115379487|ref|ZP_01466582.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|310822642|ref|YP_003955000.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|115363496|gb|EAU62636.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|309395714|gb|ADO73173.1| Rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
Length = 236
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 34 PVTAALLATNTLIYLRPAFL--DSLVPS---IHEV-----WFNPHLILKYKDLKRFFLSP 83
PV +A+LA + +++ FL L+P + V + P +++ R
Sbjct: 28 PVCSAVLALSVVMFFLDGFLLRQGLIPGGDWLERVGKPLALYGP--LIQQGQPWRVLTYA 85
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL +NM + G LE ++GS F LG+S +T + + + L FD+
Sbjct: 86 FEHGGPIHLLFNMSAAFTLGPSLERAIGSWRF-------LGLSL-VTCVGSAAFALLFDF 137
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
++ VG SG++ L + YT + W I + +PGVS+
Sbjct: 138 DQP-----TVGASGMILGWLGALLPIAPGYTR-------RQLGLWLLQIALISLIPGVSW 185
Query: 204 LGHLGGILAGI---LYLKL-KGGYSGSDPLTTII 233
GHLGG+L G+ L LK+ K Y+ + PL I
Sbjct: 186 AGHLGGVLFGLPCGLALKMGKAVYARALPLLLFI 219
>gi|344233876|gb|EGV65746.1| hypothetical protein CANTEDRAFT_112606 [Candida tenuis ATCC 10573]
Length = 284
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
DL R YH +H N++++ E + G+ + + LL ++ G+ L
Sbjct: 60 DLNRVSFYVLYHTGFTHYLVNILAIAAPMCHFERAHGTVH-TGITLNLLAVTAGLQYCLL 118
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVH--------GLLVPARYA 186
S + Y + +G SG++F+ + ++ V + +P +Y+
Sbjct: 119 GSFL--------YPNTRVIGLSGIIFSFVTYFAVKEHEFQPVSFRFPLNGTDISLPTKYS 170
Query: 187 AWAELIIIQMFVPGVSFLGHLGGILAGIL--YLKLKGGYSGSDPLTTIIRGATGVL 240
+ L I+ + PG SF GHL GI +G L Y KL Y S + I G++
Sbjct: 171 PFVSLAIVTVIFPGSSFFGHLAGISSGYLLAYGKLNILYPPSSIIVAIENKLAGLI 226
>gi|224095662|ref|XP_002310428.1| predicted protein [Populus trichocarpa]
gi|222853331|gb|EEE90878.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL +G + + L+ +S + L +
Sbjct: 53 RIITSAFSHISVIHLVFNMSALWSLGVVEQLGHIGLGVAYYLHHTLVLVVLSGALVLGMY 112
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAELI 192
L+ F E + S AVG+S V+F +L+ + ++ G L +P +A + LI
Sbjct: 113 HLLIQRFKIEY-FRSVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLI 171
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SFLGHL GI+ G
Sbjct: 172 FTSIIVPQASFLGHLSGIVVG 192
>gi|258650339|ref|YP_003199495.1| rhomboid family protein [Nakamurella multipartita DSM 44233]
gi|258553564|gb|ACV76506.1| Rhomboid family protein [Nakamurella multipartita DSM 44233]
Length = 292
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLD--SLVPSIHEVWFNPHLI---LKYKDLKRFFLS 82
RL KP VT AL+A N +L A ++ S E++ LI + + R S
Sbjct: 58 RLGDKPVVTFALIAVNLAFFLVTALQSRSAMDLSYSELYLRGGLIPAEVASGEYWRLLTS 117
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFF 141
F H + HL NM+SL W GI LE +G + +++LLG S + LL + + L
Sbjct: 118 GFLHGNLVHLATNMLSLYWLGIPLERILGRGRMLTIYLISLLGASVSV-LLFSAPVSLTI 176
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
A Y G G L A L + L V I PG+
Sbjct: 177 GASGAVY-----GLMGALLATFRRLRLDLRPLVVILALNV-----------FITFSYPGL 220
Query: 202 SFLGHLGGILAGIL 215
S+ GHLGG +AG +
Sbjct: 221 SWQGHLGGFVAGAI 234
>gi|28572184|ref|NP_788964.1| integral membrane protein [Tropheryma whipplei TW08/27]
gi|28410315|emb|CAD66701.1| putative integral membrane protein [Tropheryma whipplei TW08/27]
Length = 207
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 31/194 (15%)
Query: 26 YHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
+ RL PP TA ++ ++L L S V + + ++ R F S F
Sbjct: 4 WRRLRAYPPATATIITLCIFLWLLQMLLGSGVTT-SLAFAGAYVFPDSLQPWRIFTSMFL 62
Query: 86 HASES--HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFD 142
H++ + HL +NM SL W G LE +GS F A+ ++ LG + GI L
Sbjct: 63 HSTFTPLHLLFNMYSLWWLGSNLEQRIGSWRFLALYFISGLGAAVGIVYLQP-------- 114
Query: 143 YERAYYSEYAVGFSGVLF---AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
Y+ +G SG +F A +VL S + GL +II +P
Sbjct: 115 -----YNTLTLGASGGIFGLLAAFIVLRIDSGQLWGIVGL-----------NLIISFLLP 158
Query: 200 GVSFLGHLGGILAG 213
GVS+ H+GG+L+G
Sbjct: 159 GVSWQAHIGGLLSG 172
>gi|28492976|ref|NP_787137.1| hypothetical protein TWT009 [Tropheryma whipplei str. Twist]
gi|28476016|gb|AAO44106.1| unknown [Tropheryma whipplei str. Twist]
Length = 212
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 31/194 (15%)
Query: 26 YHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
+ RL PP TA ++ ++L L S V + + ++ R F S F
Sbjct: 9 WRRLRAYPPATATIITLCIFLWLLQMLLGSGVTT-SLAFAGAYVFPDSLQPWRIFTSMFL 67
Query: 86 HASES--HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFD 142
H++ + HL +NM SL W G LE +GS F A+ ++ LG + GI L
Sbjct: 68 HSTFTPLHLLFNMYSLWWLGSNLEQRIGSWRFLALYFISGLGAAVGIVYLQP-------- 119
Query: 143 YERAYYSEYAVGFSGVLF---AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
Y+ +G SG +F A +VL S + GL +II +P
Sbjct: 120 -----YNTLTLGASGGIFGLLAAFIVLRIDSGQLWGIVGL-----------NLIISFLLP 163
Query: 200 GVSFLGHLGGILAG 213
GVS+ H+GG+L+G
Sbjct: 164 GVSWQAHIGGLLSG 177
>gi|388521227|gb|AFK48675.1| unknown [Lotus japonicus]
Length = 271
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QLE-TSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL+ +G + + L+ +S + L +
Sbjct: 53 RIITSAFSHISVIHLVFNMSALWSLGVVEQLDHLGLGVEYYLQYTLVLVILSGVLVLAMY 112
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAELI 192
L+ F E + AVG+S V+F +L+ + ++ G L +P +A + LI
Sbjct: 113 HLLIQRFKIEY-FRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLI 171
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SFLGHL GI+ G
Sbjct: 172 FTSIIVPQASFLGHLSGIVVG 192
>gi|116621336|ref|YP_823492.1| rhomboid family protein [Candidatus Solibacter usitatus Ellin6076]
gi|116224498|gb|ABJ83207.1| Rhomboid family protein [Candidatus Solibacter usitatus Ellin6076]
Length = 246
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 33 PPVTAALLATNTLIYLRPA-FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PP LL NT+++L + F + P ++++ + + F H +H
Sbjct: 18 PPGVKWLLIVNTVVFLITSLFARQFGDDFRLLALAPVAVVQHFAIWQLVTYLFLHGGITH 77
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L +NM++L G LE+ G+ +F + G+ G+ + +++ +
Sbjct: 78 LLFNMLALWMFGTPLESDWGTRQFLKYYF-ICGIGAGVCDVAMNAMM-------GNWVTS 129
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR-------YAAWAELIIIQMFVPGVSFL 204
+G SG ++ + + D T + G L P + YAA EL + G+S +
Sbjct: 130 TIGASGAIYGLLLAYGVCYPDQTVLMGFLFPIKAKYMVMIYAA-IELYLSIGVNNGISNI 188
Query: 205 GHLGGILAGILYLK 218
HLGG++ G +YLK
Sbjct: 189 AHLGGMVVGFVYLK 202
>gi|379733579|ref|YP_005327084.1| putative rhomboid protease [Blastococcus saxobsidens DD2]
gi|378781385|emb|CCG01035.1| Putative rhomboid protease [Blastococcus saxobsidens DD2]
Length = 253
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 36/193 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLV----------PSIHEVWFNPHLILKYKDLKRFFLSPF 84
VT +L+A N +++L A L P E+ P L +++ R + F
Sbjct: 40 VTLSLIAINVVMFLVTAVSAGLAGSAPLDNFRSPVFAELSQYP-LAVEFGQPWRLLTAAF 98
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
H HL NM++LL G +LE +G + + +V+ LG S I L F D
Sbjct: 99 LHIGLLHLALNMLALLIFGSELERQLGRWRYVGLYLVSALGGSTAIQL--------FGDP 150
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV---PG 200
R + + G+L A+ V++ R +D + G+LV L+ I +F+ PG
Sbjct: 151 LRPV-AGASTAIYGLLGALGVLMLVRRQD---IRGILV---------LLAINVFISFLPG 197
Query: 201 VSFLGHLGGILAG 213
VS LGHLGG++ G
Sbjct: 198 VSLLGHLGGLVTG 210
>gi|237732716|ref|ZP_04563197.1| predicted protein [Mollicutes bacterium D7]
gi|229384211|gb|EEO34302.1| predicted protein [Coprobacillus sp. D7]
Length = 209
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 32 KPPVTAALLATNTLIY----LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
K PVTA ++ L+Y ++ F + I FNP L+L R + F H
Sbjct: 7 KYPVTAGVIGICILVYCYTTVKYGFEMNAYQGIRAGGFNPILVLAGNQYWRLISANFIHF 66
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL------VLFF 141
H+F N SL+ G +E LLGM + + +L+A +L +F+
Sbjct: 67 GIMHIFCNCYSLVNLGSVMEY-------------LLGMKRYLIILIASALATTILPTVFY 113
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
S G SG +F + L + + + +V+ L ++ +++I + VP +
Sbjct: 114 ILTGNGASSIMGGISGAIFGLMGALLALAWKFKDVYAYLFKQISSSVLLMLLISILVPSI 173
Query: 202 SFLGHLGGILAGIL 215
S GH+ G++ G +
Sbjct: 174 SLSGHISGMIGGFI 187
>gi|225433926|ref|XP_002268743.1| PREDICTED: uncharacterized protein LOC100252469 [Vitis vinifera]
gi|147779771|emb|CAN67998.1| hypothetical protein VITISV_001298 [Vitis vinifera]
gi|297743810|emb|CBI36693.3| unnamed protein product [Vitis vinifera]
Length = 271
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S H S HL +NM +L G+ QL MG + + L+ +S G L+L
Sbjct: 53 RIITSALSHISVIHLVFNMSALWSLGVVEQLGHMGMGVEFYLQYTLVLVVLSGG--LVLG 110
Query: 135 KSLVLFFDYERAYYSEY-AVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAEL 191
VL ++ Y+ AVG+S V+F +L+ + + G L +P +A + L
Sbjct: 111 SYHVLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESL 170
Query: 192 IIIQMFVPGVSFLGHLGGILAG 213
I + VP SFLGHL GI+ G
Sbjct: 171 IFTSIIVPQASFLGHLSGIIVG 192
>gi|351737683|gb|AEQ60718.1| Integral membrane protein [Acanthamoeba castellanii mamavirus]
gi|398257347|gb|EJN40955.1| hypothetical protein lvs_L452 [Acanthamoeba polyphaga
lentillevirus]
Length = 171
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
++ + + FYHA+ HL N S LE MG +FA ++ + +S LLL
Sbjct: 27 SEIINYLIRTFYHANLQHLLANSFSFYMLSF-LEDVMGHAKFAFCIIFIWILSS--MLLL 83
Query: 134 AKSLVLFFDYERAYYSE--YAVGFSGVLFAMKVV-LNSRSEDYTNVHGLLVPARYAAWAE 190
A+ A+ S Y VGFSGV+F + VV L S ++ GL + A
Sbjct: 84 AE--------HTAFPSRKVYTVGFSGVIFGLIVVYLMSLGKN----RGLSI----AGLVL 127
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILYLKL 219
II Q FV G+S+ GH+ G++AG +Y+ L
Sbjct: 128 SIIPQFFVSGISYEGHICGMIAGFVYVVL 156
>gi|167756710|ref|ZP_02428837.1| hypothetical protein CLORAM_02248 [Clostridium ramosum DSM 1402]
gi|374627722|ref|ZP_09700124.1| hypothetical protein HMPREF0978_03444 [Coprobacillus sp.
8_2_54BFAA]
gi|167702885|gb|EDS17464.1| peptidase, S54 family [Clostridium ramosum DSM 1402]
gi|373912961|gb|EHQ44804.1| hypothetical protein HMPREF0978_03444 [Coprobacillus sp.
8_2_54BFAA]
Length = 214
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 32 KPPVTAALLATNTLIY----LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
K PVTA ++ L+Y ++ F + I FNP L+L R + F H
Sbjct: 7 KYPVTAGVIGICILVYCYTTVKYGFEMNAYQGIRAGGFNPILVLAGNQYWRLISANFIHF 66
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL------VLFF 141
H+F N SL+ G +E LLGM + + +L+A +L +F+
Sbjct: 67 GIMHIFCNCYSLVNLGSVMEY-------------LLGMKRYLIILIASALATTILPTVFY 113
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
S G SG +F + L + + + +V+ L ++ +++I + VP +
Sbjct: 114 ILTGNGASSIMGGISGAIFGLMGALLALAWKFKDVYAYLFKQISSSVLLMLLISILVPSI 173
Query: 202 SFLGHLGGILAGIL 215
S GH+ G++ G +
Sbjct: 174 SLSGHISGMIGGFI 187
>gi|311977917|ref|YP_003987037.1| putative rhomboid protein [Acanthamoeba polyphaga mimivirus]
gi|82000101|sp|Q5UQ86.1|RHBDL_MIMIV RecName: Full=Putative rhomboid protein L523
gi|55417137|gb|AAV50787.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|308204450|gb|ADO18251.1| putative rhomboid protein [Acanthamoeba polyphaga mimivirus]
gi|339061465|gb|AEJ34769.1| hypothetical protein MIMI_L523 [Acanthamoeba polyphaga mimivirus]
Length = 171
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
++ + + FYHA+ HL N S LE MG +FA ++ + +S LLL
Sbjct: 27 SEIINYLIRTFYHANLQHLLANSFSFYMLSF-LEDVMGHAKFAFCIIFIWILSS--MLLL 83
Query: 134 AKSLVLFFDYERAYYSE--YAVGFSGVLFAMKVV-LNSRSEDYTNVHGLLVPARYAAWAE 190
A+ A+ S Y VGFSGV+F + VV L S ++ GL + A
Sbjct: 84 AE--------HTAFPSRKVYTVGFSGVIFGLIVVYLMSLGKN----RGLSI----AGLVL 127
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILYLKL 219
II Q FV G+S+ GH+ G++AG +Y+ L
Sbjct: 128 SIIPQFFVSGISYEGHICGMIAGFVYVVL 156
>gi|255719446|ref|XP_002556003.1| KLTH0H02816p [Lachancea thermotolerans]
gi|238941969|emb|CAR30141.1| KLTH0H02816p [Lachancea thermotolerans CBS 6340]
Length = 284
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 20/188 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIH-EVWFNPHLILKYKDLKRFFLSPFYHASES 90
KPP A L T +I++ +L SLV I+ + P+ + K DL R L P H S +
Sbjct: 30 KPP---AALTTGLVIFMSLIYLLSLVVDINGHISLKPNALFKL-DLNRLSLYPLGHLSLT 85
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL N +SL E S G+ +V+ LL + I L SL ++S+
Sbjct: 86 HLVLNSLSLFGPLTMFERSHGTVH-TGVVLNLLAVFTAIVYCLMGSL---------FFSK 135
Query: 151 YAV-GFSGVLFAMKVVLNSRSE----DYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
V G SG F++ + + H P +Y L+++ +F PG SF G
Sbjct: 136 TEVLGSSGWCFSLFAYFSFKEATIRPQQRIFHSFSAPTKYMPVLILVLVTIFFPGSSFWG 195
Query: 206 HLGGILAG 213
H G+ G
Sbjct: 196 HFIGMGMG 203
>gi|290978551|ref|XP_002671999.1| predicted protein [Naegleria gruberi]
gi|284085572|gb|EFC39255.1| predicted protein [Naegleria gruberi]
Length = 230
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYTN-VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHL 207
E ++GFSGV+F+ + ++ + TN + G++ VP++Y W L++ P SF+GHL
Sbjct: 85 ECSIGFSGVIFSYLTIASTDTSQTTNSLFGMISVPSKYYPWILLLVTSFLFPSSSFVGHL 144
Query: 208 GGILAGILYLKL 219
GI++G +++ L
Sbjct: 145 FGIISGYIFVLL 156
>gi|255325720|ref|ZP_05366816.1| rhomboid family protein [Corynebacterium tuberculostearicum SK141]
gi|255297214|gb|EET76535.1| rhomboid family protein [Corynebacterium tuberculostearicum SK141]
Length = 217
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEF-AAMVVALLGMSQGITLLLAKSLVLF 140
S F H HL NM+ L+ G ++E ++G+ + AA +++ LG A +++L
Sbjct: 65 SAFMHLDAGHLAVNMIMLVLIGREVERALGTGLYLAAYLISCLG---------ASAMILT 115
Query: 141 FDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG 200
FD+E VG SG LFA+ +L GL + A A ++ G
Sbjct: 116 FDFETP-----TVGASGALFALMAMLVGAYRQ----RGLDLRAPIALVLANVVYTFLADG 166
Query: 201 VSFLGHLGGILAGIL 215
VS GHLGG+ GI+
Sbjct: 167 VSLWGHLGGLCTGIV 181
>gi|303289455|ref|XP_003064015.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454331|gb|EEH51637.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 319
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLF 93
PVT+ ++AT I +L + +V + +++ K R + H S HL
Sbjct: 13 PVTSLVVATCAAITW---YLHARGLGYDDVGMSYAAVVREKKYHRCVTASLSHVSVLHLL 69
Query: 94 YNMMSLLWKGIQLETS-----MGSNEFAA---------MVVALLGMSQGITLLLAKSLVL 139
+NM S LW +E + M E AA ++LL + ++LA VL
Sbjct: 70 FNM-STLWSCGVVEAAGGRGVMSDAESAAGYPWGSAWYARLSLLMLLGTCGIVLATYHVL 128
Query: 140 FFDYERAYYSEY-AVGFSGVLFAMKVVLNSRSEDYTNV---HGLLVPARYAAWAELIIIQ 195
+ R Y AVG+S V+F +L+ + + V + +P A +A L
Sbjct: 129 LTRFRREEYERVTAVGYSAVVFGWMTILSVKRPTSSLVLIGGAVNLPVNLAPFASLAFTS 188
Query: 196 MFVPGVSFLGHLGGILAGIL 215
+ VP SF+GHL GI+ G L
Sbjct: 189 IVVPRASFVGHLAGIVMGYL 208
>gi|365832927|ref|ZP_09374453.1| hypothetical protein HMPREF1021_03217 [Coprobacillus sp. 3_3_56FAA]
gi|365259760|gb|EHM89743.1| hypothetical protein HMPREF1021_03217 [Coprobacillus sp. 3_3_56FAA]
Length = 214
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 32 KPPVTAALLATNTLIY----LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
K PVTA ++ L+Y ++ F + I FNP L+L R + F H
Sbjct: 7 KYPVTAGVIGICILVYCYTTVKYDFEMNAYQGIRAGGFNPILVLAGNQYWRLISANFIHF 66
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL------VLFF 141
H+F N SL+ G +E LLGM + + +L+A +L +F+
Sbjct: 67 GIMHIFCNCYSLVNLGSVMEY-------------LLGMKRYLIILIASALATTILPTVFY 113
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
S G SG +F + L + + + +V+ L ++ +++I + VP +
Sbjct: 114 ILTGNGASSIMGGISGAIFGLMGALLALAWKFKDVYAYLFKQISSSVLLMLLISILVPSI 173
Query: 202 SFLGHLGGILAGIL 215
S GH+ G++ G +
Sbjct: 174 SLSGHISGMIGGFI 187
>gi|328870427|gb|EGG18801.1| methionyl-tRNA synthetase beta subunit [Dictyostelium fasciculatum]
Length = 277
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 41/192 (21%)
Query: 33 PPVTAALLATNTLIYLR-------PAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
P +T +L T ++L P L L +I+E W R S +
Sbjct: 29 PFITRIILYTCVTLFLLDSVLSFFPTVLCYLSFNIYESW-------------RLITSTLF 75
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
H + HL +NMM+ + LE S GS + +++ + S + ++++ + + + D
Sbjct: 76 HINLLHLLFNMMAFIPFSTLLENSCGSVLYGYLMLVFMITSSLMAVIISNT-IYWIDPTA 134
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
YS +G SGV+F + V N H + P + + P SF+G
Sbjct: 135 ISYSC-TIGLSGVVFLLVTV---------NCHWVTTPRSFILF----------PQSSFIG 174
Query: 206 HLGGILAGILYL 217
HLGGI+A +YL
Sbjct: 175 HLGGIVAAYIYL 186
>gi|170576544|ref|XP_001893672.1| MGC84665 protein [Brugia malayi]
gi|158600200|gb|EDP37503.1| MGC84665 protein, putative [Brugia malayi]
Length = 169
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM--VVALLG 124
P IL + R S H + HL++NM+SLLWKG +LE +GSN F + V A+
Sbjct: 5 PSRILYRCEWLRMLASTIMHVDDMHLYFNMISLLWKGRRLEPWLGSNRFLLLLAVFAVAT 64
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVL 159
S + L V F+ Y ++ A+GFSG +
Sbjct: 65 SSTMVGLSYLADEVFSFN-GGGYMNQCAIGFSGSI 98
>gi|294506415|ref|YP_003570473.1| Rhomboid protease glpG [Salinibacter ruber M8]
gi|294342743|emb|CBH23521.1| Rhomboid protease glpG [Salinibacter ruber M8]
Length = 230
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSI-HEVWFNPHLILKYKDLKRFFLSPFYHASES 90
+ P+T ALL +N + L AF D PS+ E+ F PH I +++ RF + F HAS +
Sbjct: 23 QAPITLALLLSNLGVSLY-AFTD---PSLLRELSFRPHRIRTHREFYRFLTAGFVHASGT 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEF 115
HL +NM++ + G LE +G F
Sbjct: 79 HLAFNMITFYFFGPLLEGILGIGAF 103
>gi|281205968|gb|EFA80157.1| hypothetical protein PPL_06979 [Polysphondylium pallidum PN500]
Length = 338
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 22/144 (15%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLL-WKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
+ +R LS F H+ HL N +SL+ K I E + GS + L+ + +++
Sbjct: 151 EYRRTLLSIFSHSGLIHLVLNCVSLIDLKSI--EETEGSFRYLQYTFMLIITCVVVEIII 208
Query: 134 AKSLV----LFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWA 189
+K L D E ++G+SGVLF + V+ R +G++ AR A ++
Sbjct: 209 SKQLSGNGQRLMDVE-------SLGYSGVLFGLLVISTFR-------YGIMSSARTALYS 254
Query: 190 ELIIIQMFVPGVSFLGHLGGILAG 213
LII Q+F F+GHL GI+AG
Sbjct: 255 -LIITQIFNRNAHFIGHLAGIVAG 277
>gi|449117125|ref|ZP_21753569.1| hypothetical protein HMPREF9726_01554 [Treponema denticola H-22]
gi|448952389|gb|EMB33193.1| hypothetical protein HMPREF9726_01554 [Treponema denticola H-22]
Length = 209
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
P L+++ + +FF F H HL +NM++L + G+ +E +G+ EF + L+G
Sbjct: 44 PILVVEAQTYWQFFTYQFVHGDFFHLAFNMLALFFFGVPVECKIGTKEF-ILYYLLIGTI 102
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFA---MKVVLNSRSEDYTNVHGLL-VP 182
GI L + +Y+ +G SG +F + VL S Y + G++ VP
Sbjct: 103 GGILSFLVYA-------ATGFYTITLIGASGAIFGVLLLYAVLYPNSVIY--IWGVIPVP 153
Query: 183 A-----RYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGG 222
A YA ELI I GV+ L H G++AG +Y++++ G
Sbjct: 154 APLLILGYAV-IELISIFSIGDGVAHLTHFIGLIAGWVYIRIRFG 197
>gi|15231701|ref|NP_191511.1| RHOMBOID-like protein 13 [Arabidopsis thaliana]
gi|6996288|emb|CAB75449.1| putative protein [Arabidopsis thaliana]
gi|332646414|gb|AEE79935.1| RHOMBOID-like protein 13 [Arabidopsis thaliana]
Length = 269
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S H S HL +NM +L G+ QL +G+ + + L+ S + + +
Sbjct: 53 RMITSALSHISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIY 112
Query: 135 KSLVLFF--DYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAE 190
L+ F DY R AVG+S V+F +L+ + N+ GLL +P +A +
Sbjct: 113 HLLIARFKIDYFR---RVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFES 169
Query: 191 LIIIQMFVPGVSFLGHLGGILAG 213
LI + VP SFLGHL GIL G
Sbjct: 170 LIFTSIIVPQASFLGHLSGILVG 192
>gi|404212656|ref|YP_006666831.1| putative membrane protein [Gordonia sp. KTR9]
gi|403643455|gb|AFR46695.1| putative membrane protein [Gordonia sp. KTR9]
Length = 237
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK-----RFFLSPFYH 86
+P T AL+A N L++ + F+ +LK D+ R + F H
Sbjct: 10 QPYATYALIAVNLLVFALCVLQSGVGDPGGASIFSAGDLLK-SDVASGEYWRLLTAGFLH 68
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
S H+ NM+SL G LE ++G + A+ GI LL + V+ F+ +RA
Sbjct: 69 FSVMHVAVNMLSLYILGRDLELALGIGRYLAV--------YGIALLGGSAAVMLFEDDRA 120
Query: 147 YYSEYAVGFSGVLFAMKV-VLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
+ + G++ AM V VL +R + V LL+ +++ +PG+S LG
Sbjct: 121 LTAGASGAIYGLMGAMLVIVLKAR---VSPVPVLLIIGFN------VVLSFSLPGISVLG 171
Query: 206 HLGGILAG 213
HLGG+ G
Sbjct: 172 HLGGLFFG 179
>gi|84497160|ref|ZP_00995982.1| membrane spanning protein [Janibacter sp. HTCC2649]
gi|84382048|gb|EAP97930.1| membrane spanning protein [Janibacter sp. HTCC2649]
Length = 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 25/193 (12%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK--RFFLSPFYHASE 89
+P VT ++ +++ + SL +V F P+L D + RF S F HA
Sbjct: 31 RPLVTLTIIGICVAVFVGQMAIPSLT---DDVAFAPYL----GDTQPWRFLTSAFAHAPN 83
Query: 90 S--HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLA--KSLVLFFDYE 144
+ H+ +NM +L G LE +G FAA+ +++ G S + LLLA S+ + +
Sbjct: 84 NFLHIGFNMWALWMMGQYLEPMLGRARFAALYLISAFGGSV-VYLLLAFPHSIAQLNNRD 142
Query: 145 RAYYSEYAVGFSGVLFAMK---VVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
+ AVG SG +F + ++L R G YA A +I VPG+
Sbjct: 143 YGPWETAAVGASGAVFGLFGAFLILQRR-------LGRSAATMYATIAINAVIGFVVPGI 195
Query: 202 SFLGHLGGILAGI 214
++ HLGG L GI
Sbjct: 196 AWQAHLGGFLVGI 208
>gi|307136259|gb|ADN34087.1| rhomboid protein [Cucumis melo subsp. melo]
Length = 271
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLE----TSMGSNEFAAMVVALLGMSQGITLLL 133
R S F H S HL +NM S LW +E +G + + L+ +S + L +
Sbjct: 53 RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 111
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAEL 191
L+ F E + AVG+S V+F +L+ R ++ G L +P +A + L
Sbjct: 112 YHLLIQKFKLEY-FRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESL 170
Query: 192 IIIQMFVPGVSFLGHLGGILAG 213
I + VP SFLGHL GI+ G
Sbjct: 171 IFTSIIVPQASFLGHLSGIIVG 192
>gi|384251613|gb|EIE25090.1| rhomboid-domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNE------F 115
+V N ++ +L R + H HL +N+ S LW +E S G+ +
Sbjct: 34 DVGLNYDQAVQKLELWRVLTAQVSHVELLHLLFNL-STLWSLGVIEESNGNGAKGGTRYY 92
Query: 116 AAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTN 175
+ LL S + LL L + E+ Y++ VG+S V+F +L+ +
Sbjct: 93 LQTSLVLLIFSGLVCLLFYHVLGVVLRREQ-YHTVTTVGYSAVIFGWMTILSRTGVASFS 151
Query: 176 VHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
V GL +P +A L++ + +P SFLGHL GI+ G +
Sbjct: 152 VFGLANIPMWLTPFASLVLTSIIIPRASFLGHLSGIVVGFM 192
>gi|302785620|ref|XP_002974581.1| hypothetical protein SELMODRAFT_101862 [Selaginella moellendorffii]
gi|300157476|gb|EFJ24101.1| hypothetical protein SELMODRAFT_101862 [Selaginella moellendorffii]
Length = 272
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLW--------KGIQLETSMGSNEFAAMVVALLGMSQGI 129
R S F H S HL +NM S LW KGI L + + +V+ + GI
Sbjct: 54 RILTSSFSHISFLHLVFNM-SALWSLGMVEGLKGIGLGVTFYVHYTLLLVLLSAALVLGI 112
Query: 130 TLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAA 187
LL F+ E Y AVG+S V+F +L S+ + GLL +P +A
Sbjct: 113 YHLLIHR----FNLEL-YKRVSAVGYSCVVFGWMTILASKQPSSKLELFGLLSLPINFAP 167
Query: 188 WAELIIIQMFVPGVSFLGHLGGILAGIL 215
+ L+ + VP SFLGHL GI+ G L
Sbjct: 168 FESLVFTSIIVPKASFLGHLAGIIVGYL 195
>gi|449454580|ref|XP_004145032.1| PREDICTED: rhomboid protein 2-like [Cucumis sativus]
gi|449471895|ref|XP_004153438.1| PREDICTED: rhomboid protein 2-like [Cucumis sativus]
gi|449520980|ref|XP_004167510.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid protein 2-like [Cucumis
sativus]
Length = 271
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLE----TSMGSNEFAAMVVALLGMSQGITLLL 133
R S F H S HL +NM S LW +E +G + + L+ +S + L +
Sbjct: 53 RIITSAFSHISVIHLVFNM-SALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 111
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAEL 191
L+ F E + AVG+S V+F +L+ R ++ G L +P +A + L
Sbjct: 112 YHLLIQKFKLEY-FRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFESL 170
Query: 192 IIIQMFVPGVSFLGHLGGILAG 213
I + VP SFLGHL GI+ G
Sbjct: 171 IFTSIIVPQASFLGHLSGIIVG 192
>gi|383829530|ref|ZP_09984619.1| putative membrane protein [Saccharomonospora xinjiangensis XJ-54]
gi|383462183|gb|EID54273.1| putative membrane protein [Saccharomonospora xinjiangensis XJ-54]
Length = 317
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFL--DSL----VPSIHEVWFNPHLILKYKDLKRFFLS 82
+P +P V L+A N ++++ AF D++ P E P ++ + + R S
Sbjct: 88 MPRRPVVVPLLIAVNVVVFVLTAFQARDAMNNYNSPVFAEGVLWPQAVVAFDEWWRLITS 147
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFD 142
F H HL NM++L G LE +G F A+ +++L + V F
Sbjct: 148 GFLHYGLLHLAMNMLALWVLGRDLEMLLGRVRFLAVYF--------VSMLGGGAAVFAFG 199
Query: 143 YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVS 202
+ + G++ AM V + + T G++V +I+ + +P +S
Sbjct: 200 APETSTAGASGAIYGLMGAMLVAVLRLRLNPTTAIGIIVLN--------LILTVSIPNIS 251
Query: 203 FLGHLGGI 210
LGHLGG+
Sbjct: 252 LLGHLGGL 259
>gi|311739300|ref|ZP_07713136.1| rhomboid family protein [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305598|gb|EFQ81665.1| rhomboid family protein [Corynebacterium pseudogenitalium ATCC
33035]
Length = 217
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEF-AAMVVALLGMSQGITLLLAKSLVLF 140
S F H HL NM+ LL G ++E ++G+ + AA +++ LG A +++L
Sbjct: 65 SEFMHLDAGHLAVNMVMLLLIGREVERALGTALYLAAYLISCLG---------ASAMILT 115
Query: 141 FDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG 200
FD+E VG SG LFA+ +L GL + A A + G
Sbjct: 116 FDFETP-----TVGASGALFALMAMLVGAYRQ----RGLDLRAPIALVLANVAYTFLADG 166
Query: 201 VSFLGHLGGILAGIL 215
VS GHLGG+ GI+
Sbjct: 167 VSLWGHLGGLCTGIV 181
>gi|453381363|dbj|GAC84026.1| rhomboid family protein [Gordonia paraffinivorans NBRC 108238]
Length = 294
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK-----RFFLSP 83
+P KP VT L+A N L++L A F +LK D+ R +
Sbjct: 64 VPTKPYVTYGLIAVNVLVFLLCAAQAGFGDPGAAPLFAEGDLLK-SDVASGEYWRLLTAG 122
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFD 142
F H S H+ NM+SL G LE ++G + A+ ++ALLG S V+ F+
Sbjct: 123 FLHFSVMHIAVNMLSLYILGRDLELALGMFRYLAIYLIALLGGSAA---------VMLFE 173
Query: 143 YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVS 202
+RA + + G++ AM V++ V ++ A +++ +PG+S
Sbjct: 174 ADRAVTAGASGAIYGLMGAMLVIILKARVSPVPVLSII--------AFNVVLSFSLPGIS 225
Query: 203 FLGH 206
LGH
Sbjct: 226 VLGH 229
>gi|429731520|ref|ZP_19266147.1| peptidase, S54 family [Corynebacterium durum F0235]
gi|429145437|gb|EKX88525.1| peptidase, S54 family [Corynebacterium durum F0235]
Length = 240
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLKRFFLSP--- 83
RL + P T L A N ++YL A S + ++ E H +L D+ + P
Sbjct: 10 RLFRQAPATFTLCAANVVVYLLTAVQSLSFLHNLDESSLAQHWVLYLPDMVDSIVGPLRA 69
Query: 84 ----FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F H +HL +N++ + G ++E +G F+ + A G++ +L +
Sbjct: 70 VGATFLHDGPAHLLFNIVMIYLLGREVEKKIGHALFSTVYFA-----GGVS---GSALSV 121
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVV---LNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
+ D + A VG SG +A+ V L ++ T++ G + LI++ +
Sbjct: 122 WLDPQHA-----VVGASGSAYALMAVFAGLAAKRRGRTDLRGAI---------TLILVNL 167
Query: 197 ----FVPGVSFLGHLGGILAGIL 215
PGVS GH GG+ AGI+
Sbjct: 168 GFSVLSPGVSLAGHAGGLTAGIV 190
>gi|170290174|ref|YP_001736990.1| rhomboid family protein [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174254|gb|ACB07307.1| Rhomboid family protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 452
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYH 86
K T +L+ N++IYL ++ ++ S+ + W F+P L+ RF S F H
Sbjct: 15 KHRATISLIVINSIIYLATSY-NNFFLSVSDYWVTVGGFSPSLLTHTDQWYRFLTSMFLH 73
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEF 115
A H+F+NM L + G +E ++GS F
Sbjct: 74 ADIFHIFFNMYFLFFAGRAVEDALGSTRF 102
>gi|42525643|ref|NP_970741.1| rhomboid [Treponema denticola ATCC 35405]
gi|422340835|ref|ZP_16421776.1| rhomboid family protein [Treponema denticola F0402]
gi|449103871|ref|ZP_21740614.1| hypothetical protein HMPREF9730_01511 [Treponema denticola AL-2]
gi|449106028|ref|ZP_21742720.1| hypothetical protein HMPREF9729_00985 [Treponema denticola ASLM]
gi|449108116|ref|ZP_21744760.1| hypothetical protein HMPREF9722_00456 [Treponema denticola ATCC
33520]
gi|449110633|ref|ZP_21747233.1| hypothetical protein HMPREF9735_00282 [Treponema denticola ATCC
33521]
gi|449114556|ref|ZP_21751033.1| hypothetical protein HMPREF9721_01551 [Treponema denticola ATCC
35404]
gi|449118805|ref|ZP_21755206.1| hypothetical protein HMPREF9725_00671 [Treponema denticola H1-T]
gi|449121194|ref|ZP_21757546.1| hypothetical protein HMPREF9727_00306 [Treponema denticola MYR-T]
gi|449124938|ref|ZP_21761255.1| hypothetical protein HMPREF9723_01299 [Treponema denticola OTK]
gi|449129942|ref|ZP_21766170.1| hypothetical protein HMPREF9724_00835 [Treponema denticola SP37]
gi|451967767|ref|ZP_21920996.1| hypothetical protein HMPREF9728_00162 [Treponema denticola US-Trep]
gi|41815654|gb|AAS10622.1| rhomboid family protein [Treponema denticola ATCC 35405]
gi|325475239|gb|EGC78424.1| rhomboid family protein [Treponema denticola F0402]
gi|448940621|gb|EMB21526.1| hypothetical protein HMPREF9723_01299 [Treponema denticola OTK]
gi|448944577|gb|EMB25455.1| hypothetical protein HMPREF9724_00835 [Treponema denticola SP37]
gi|448951420|gb|EMB32233.1| hypothetical protein HMPREF9727_00306 [Treponema denticola MYR-T]
gi|448951833|gb|EMB32642.1| hypothetical protein HMPREF9725_00671 [Treponema denticola H1-T]
gi|448956181|gb|EMB36943.1| hypothetical protein HMPREF9721_01551 [Treponema denticola ATCC
35404]
gi|448960007|gb|EMB40724.1| hypothetical protein HMPREF9735_00282 [Treponema denticola ATCC
33521]
gi|448961966|gb|EMB42660.1| hypothetical protein HMPREF9722_00456 [Treponema denticola ATCC
33520]
gi|448964324|gb|EMB44996.1| hypothetical protein HMPREF9730_01511 [Treponema denticola AL-2]
gi|448966596|gb|EMB47251.1| hypothetical protein HMPREF9729_00985 [Treponema denticola ASLM]
gi|451703553|gb|EMD57919.1| hypothetical protein HMPREF9728_00162 [Treponema denticola US-Trep]
Length = 209
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
P L+++ + +FF F H HL +NM++L + G+ +E +G+ EF + L+G
Sbjct: 44 PILVVEAQTYWQFFTYQFVHGDFFHLAFNMLALFFFGVPVERKIGTKEF-ILYYLLIGTI 102
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFA---MKVVLNSRSEDYTNVHGLL-VP 182
GI L + +Y+ +G SG +F + VL S Y + G++ VP
Sbjct: 103 GGILSFLVYA-------ATGFYTITLIGASGAIFGVLLLYAVLYPNSVIY--IWGVIPVP 153
Query: 183 A-----RYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGG 222
A YA ELI I GV+ L H G++AG +Y++++ G
Sbjct: 154 APLLILGYAV-IELISIFSIGDGVAHLTHFIGLIAGWVYIRIRFG 197
>gi|399524860|ref|ZP_10765362.1| peptidase, S54 family [Atopobium sp. ICM58]
gi|398373815|gb|EJN51650.1| peptidase, S54 family [Atopobium sp. ICM58]
Length = 292
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
P VT A++A L+YL + SL S+ + P ++ + F H +H
Sbjct: 73 APVVTYAMMAICVLMYLVTSVSPSLKASLSLL---PATLMTHP--WTVLTGAFLHGGITH 127
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAA--MVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
+ +NM+SL W G +E +MG F A +V AL G + I L + +F A S
Sbjct: 128 ILFNMLSLYWVGRAIEPAMGRWRFLALYLVSALGGSAFIIAWCLIQPSEIFVSTVGA--S 185
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
G G +F ++ + S + + G+ ++ V G+S+ GH+GG
Sbjct: 186 GAVFGLFGAVFVLQRLGGSDTTVILTLLGI-----------NLVYGFMVSGISWQGHIGG 234
Query: 210 ILAGI 214
+AG+
Sbjct: 235 AIAGV 239
>gi|299470170|emb|CBN78198.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 305
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 26/158 (16%)
Query: 70 ILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGI 129
+L ++ R + H HL +++ SL W ++ET +GS G
Sbjct: 88 LLVRQEWWRVVTAAVAHGGLLHLAFSISSL-WSCRRIETELGS--------------WGY 132
Query: 130 TLLLAKSLVLFFDYERAY----------YSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGL 179
L A +VL +E+ + E + G+SGV+FA VVL+ R + V G
Sbjct: 133 LLASAHFVVLAEVFEKMFMHVLLRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPARVIGG 192
Query: 180 LVPARYAAWA-ELIIIQMFVPGVSFLGHLGGILAGILY 216
V + +A+ L+++++ + SF+GHL G+ AG+L+
Sbjct: 193 FVFSGFASVVLNLVVVRILIRQSSFVGHLAGVWAGLLF 230
>gi|291438500|ref|ZP_06577890.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291341395|gb|EFE68351.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 296
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 37/195 (18%)
Query: 35 VTAALLATNTLIY----LRPAFLDSLVPSIHEVW----FNPHLILKYKDLKRFFLSPFYH 86
VT LL N ++ +RP+ L L + VW F P + + R F S F H
Sbjct: 85 VTKILLGINLAVFVAVQIRPSLLRDLY--LIGVWPPAPFLPTEGVADGEWYRLFTSMFTH 142
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
+ H+ +NM+ L W G LE ++G + A+ + +T LLA
Sbjct: 143 EAIWHIAFNMLGLWWLGGPLEQALGRARYLALYLISGLAGSALTYLLASG---------- 192
Query: 147 YYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG-- 200
+ +G SG +F AM V++ D + LLV + +I F PG
Sbjct: 193 --TTATLGASGAIFGLFGAMAVLMRRLDYDMRPIIALLV---------INLIFTFSPGFN 241
Query: 201 VSFLGHLGGILAGIL 215
+++ H+GG++AG++
Sbjct: 242 IAWQAHIGGLVAGVV 256
>gi|323342857|ref|ZP_08083089.1| hypothetical protein HMPREF0357_11270 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463969|gb|EFY09163.1| hypothetical protein HMPREF0357_11270 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 399
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 40 LATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSL 99
L NT+ + AF + HE WF RF + F H S HL N+M+L
Sbjct: 180 LNINTVAVMLGAFYKPFIVHAHE-WF------------RFITAGFLHISFLHLIMNLMAL 226
Query: 100 LWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVL 159
G+ +ET M ++ ++A + M +L + ++ +G SG L
Sbjct: 227 RNLGVVMETVMEGKKYLFTLIAGILMGNAFVFILDEGVI-------------GLGISGGL 273
Query: 160 FAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV---PGVSFLGHLGGILAGIL 215
FA+ L + + P + +++ I + + PGVS HLGG++AG+L
Sbjct: 274 FAL---LGAMCVYLFETKAMRNPKVMSQVFQVLFINLIISSLPGVSATAHLGGLIAGLL 329
>gi|162449650|ref|YP_001612017.1| hypothetical protein sce1379 [Sorangium cellulosum So ce56]
gi|161160232|emb|CAN91537.1| hypothetical protein sce1379 [Sorangium cellulosum So ce56]
Length = 565
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 24/150 (16%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
+++ +L R S F HA HLF NM++L G LE +G F + L G S
Sbjct: 219 VRHGELYRLLASAFLHADPMHLFVNMLALWSFGPMLEALLGPRRF----LLLYGASA--- 271
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPA-----RY 185
L SL +R ++VG SG ++ + + + HGLL PA R
Sbjct: 272 --LGGSLASAMLEDR-----WSVGASGAIWGL---MTAGIGVALRPHGLLPPAMIAQMRS 321
Query: 186 AAWAE--LIIIQMFVPGVSFLGHLGGILAG 213
AW L ++ F PGV L HLGG + G
Sbjct: 322 RAWLPLGLNLVYSFQPGVDLLAHLGGGVVG 351
>gi|336066342|ref|YP_004561200.1| peptidase, S54 (rhomboid) family [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334296288|dbj|BAK32159.1| peptidase, S54 (rhomboid) family [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 399
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 40 LATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSL 99
L NT+ + AF + HE WF RF + F H S HL N+M+L
Sbjct: 180 LNINTVAVMLGAFYKPFIVHAHE-WF------------RFITAGFLHISFLHLIMNLMAL 226
Query: 100 LWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVL 159
G+ +ET M ++ ++A + M +L + ++ +G SG L
Sbjct: 227 RNLGVVMETVMEGKKYLFTLIAGILMGNAFVFILDEGVI-------------GLGISGGL 273
Query: 160 FAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV---PGVSFLGHLGGILAGIL 215
FA+ L + + P + +++ I + + PGVS HLGG++AG+L
Sbjct: 274 FAL---LGAMCVYLFETKAIRNPKVMSQVFQVLFINLIISSLPGVSATAHLGGLIAGLL 329
>gi|83814935|ref|YP_444663.1| integral membrane protein [Salinibacter ruber DSM 13855]
gi|83756329|gb|ABC44442.1| putative integral membrane protein [Salinibacter ruber DSM 13855]
Length = 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSI-HEVWFNPHLILKYKDLKRFFLSPFYHASES 90
+ P+T ALL +N + L AF D PS+ E+ F PH I +++ RF + F HAS +
Sbjct: 23 QAPITLALLLSNLGVSLY-AFTD---PSLLRELSFRPHRIRTHREGYRFLTAGFVHASGT 78
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEF 115
HL +NM++ + G LE +G F
Sbjct: 79 HLAFNMITFYFFGPLLEGILGIGAF 103
>gi|302759717|ref|XP_002963281.1| hypothetical protein SELMODRAFT_79372 [Selaginella moellendorffii]
gi|300168549|gb|EFJ35152.1| hypothetical protein SELMODRAFT_79372 [Selaginella moellendorffii]
Length = 272
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 69/157 (43%), Gaps = 34/157 (21%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKS- 136
R S F H S HL +NM S LW S+G MV L G+ GIT + +
Sbjct: 54 RILTSSFSHISFLHLVFNM-SALW-------SLG------MVEGLKGIGLGITFYVHYTL 99
Query: 137 ----------------LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGL 179
LV F+ E Y AVG+S V+F +L S+ + GL
Sbjct: 100 LLVLLSAALVLGIYHFLVHRFNLEL-YKRVSAVGYSCVVFGWMTILASKQPSSKLELFGL 158
Query: 180 L-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
L +P +A + L+ + VP SFLGHL GI+ G L
Sbjct: 159 LSLPINFAPFESLVFTSIIVPKASFLGHLAGIIVGYL 195
>gi|357019099|ref|ZP_09081357.1| rhomboid family protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356481160|gb|EHI14270.1| rhomboid family protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 281
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 77/189 (40%), Gaps = 23/189 (12%)
Query: 28 RLPWKPPV-TAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYH 86
R+ PPV T L+A N L+Y+ L E + + + R S F H
Sbjct: 68 RISTGPPVLTYTLIAVNVLMYV----LQRASTGFTEAFVLWAPAVAAGEYYRLVTSAFLH 123
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
HL +NM +L G LE ++G F G+ ++ L LV
Sbjct: 124 FGLMHLLFNMFALYVIGGPLEAALGRLRF--------GLLYALSALGGSVLVYLLAMNPT 175
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGH 206
+ AV G+ A VV + D V GL+V ++I VPG+S+ GH
Sbjct: 176 AGASGAV--FGLFAATYVVAKRLNLDVRFVTGLIVVN--------LVITFVVPGISWQGH 225
Query: 207 LGGILAGIL 215
LGG+L G L
Sbjct: 226 LGGLLTGAL 234
>gi|269954822|ref|YP_003324611.1| Rhomboid family protein [Xylanimonas cellulosilytica DSM 15894]
gi|269303503|gb|ACZ29053.1| Rhomboid family protein [Xylanimonas cellulosilytica DSM 15894]
Length = 282
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPS-IHEVWFNPHLILKYKDLKRFFLSPFYHASE- 89
+P VT L+ + ++ L VP + + P +L + RF + F H++
Sbjct: 76 RPVVTFTLIGICAVSFV----LQLAVPGWTQQFMYAP--VLGVGEPFRFLTAAFLHSTGF 129
Query: 90 -SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ +NM +L G LE +G F A+ V L + + +LL S V
Sbjct: 130 FGHILFNMWALYVTGQFLEPVLGRARFIALCV-LSAIGGSVAVLLLASPV---------- 178
Query: 149 SEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
+ VG SG++F AM VL + + GL+ A +I VPG+S+
Sbjct: 179 -QAVVGASGMVFGLFGAMVPVLRRLGGNAAQIIGLI--------AINGVIGFLVPGISWQ 229
Query: 205 GHLGGILAGI 214
GHLGG++ G+
Sbjct: 230 GHLGGLVVGL 239
>gi|428173649|gb|EKX42550.1| hypothetical protein GUITHDRAFT_88083, partial [Guillardia theta
CCMP2712]
Length = 241
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
K R + H + HL +NM S W+ E +GS E+ + L +S +
Sbjct: 53 KQWWRTLSASLSHINLVHLGFNMFST-WQLRHAEQILGSLEYLRFTLVFLLLSVIFQNAI 111
Query: 134 AKSLVLFFDYERAYYSEYA-----VGFSGVLFA----MKVVLNSRSEDYTNVHGLLVPAR 184
L+ R +EY VGFS V+FA M ++ + +S D+ VP
Sbjct: 112 HHVLL------RTPSAEYTLNTVGVGFSCVVFAWMTWMSLLTSGQSLDFLFFR---VPYN 162
Query: 185 YAAWAELIIIQMFVPGVSFLGHLGGILAG 213
+ +A LI Q+ +P V F+GHL GI+AG
Sbjct: 163 MSPFASLIFTQLMIPRVDFIGHLSGIIAG 191
>gi|222619672|gb|EEE55804.1| hypothetical protein OsJ_04394 [Oryza sativa Japonica Group]
Length = 362
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL + +G + + L+ +S + L
Sbjct: 54 RIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYTLVLVVLSGLLVLGFY 113
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLL-VPARYAAWAELI 192
++ F E + AVG+S V+F M ++ + N+ G+L +P +A + LI
Sbjct: 114 HVMIQKFKVEY-FRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGVLSLPISFAPFESLI 172
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SF+GHL GI+ G
Sbjct: 173 FTSIMVPQASFIGHLSGIIVG 193
>gi|296268056|ref|YP_003650688.1| rhomboid family protein [Thermobispora bispora DSM 43833]
gi|296090843|gb|ADG86795.1| Rhomboid family protein [Thermobispora bispora DSM 43833]
Length = 286
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 85/193 (44%), Gaps = 36/193 (18%)
Query: 34 PVTAA-----LLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA- 87
PVT A LLA N L Y+ V S + +W + + + R S F HA
Sbjct: 75 PVTTARVSWTLLAINLLAYVAEVLDPERVISAYGMW---SIGVYQGEWWRLITSAFLHAP 131
Query: 88 --SESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYE 144
S H+ +NM +L G LE +GS FAA+ +++ LG S I L +L
Sbjct: 132 PPSFWHILFNMWALYVIGPDLERLLGSARFAALYLLSALGGSVAIYLFGVAAL----GAS 187
Query: 145 RAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAW--AELIIIQMFVPGVS 202
A Y G G LF + L T+V G+L W ++I VPG+S
Sbjct: 188 GAIY-----GLFGALFVVARRLG------TDVRGVL-------WLIGINVLITFVVPGIS 229
Query: 203 FLGHLGGILAGIL 215
+ GHLGG++ G +
Sbjct: 230 WQGHLGGLVTGTV 242
>gi|21952847|dbj|BAC06262.1| P0696G06.19 [Oryza sativa Japonica Group]
Length = 685
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL + +G + + L+ +S + L
Sbjct: 466 RIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYTLVLVVLSGLLVLGFY 525
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLL-VPARYAAWAELI 192
++ F E + AVG+S V+F M ++ + N+ G+L +P +A + LI
Sbjct: 526 HVMIQKFKVEY-FRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGVLSLPISFAPFESLI 584
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SF+GHL GI+ G
Sbjct: 585 FTSIMVPQASFIGHLSGIIVG 605
>gi|257054112|ref|YP_003131944.1| membrane protein [Saccharomonospora viridis DSM 43017]
gi|256583984|gb|ACU95117.1| uncharacterized membrane protein [Saccharomonospora viridis DSM
43017]
Length = 336
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 22/185 (11%)
Query: 39 LLATNTLIYLRPAFL------DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
L+A N +IY AF + L P + P ++ + + R S F H HL
Sbjct: 118 LIAINVVIYALTAFQAGSVMDNHLSPVFEDGVLWPVAVVLFDEWWRLLASGFLHYGLLHL 177
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
NM++L G LE +G F A V L M G V F + +
Sbjct: 178 AMNMLALWVLGRDLELLLGRIRFLA--VYFLSMFAGAVA------VFVFGAADTATAGAS 229
Query: 153 VGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILA 212
G++ A+ V + + T G++V I+I + +PG+S LGHLGG++A
Sbjct: 230 GAIYGLMGAVLVAVLRLRLNATAAIGIIVLN--------IVISVSLPGISLLGHLGGLVA 281
Query: 213 GILYL 217
G L +
Sbjct: 282 GALAM 286
>gi|50307309|ref|XP_453633.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606352|sp|Q6CR06.1|RBD2_KLULA RecName: Full=Rhomboid protein 2
gi|49642767|emb|CAH00729.1| KLLA0D12804p [Kluyveromyces lactis]
Length = 271
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 40 LATNTLIYLRPAFL-DSLVPSIHE-VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMM 97
LA I+L FL ++LV I+E + P + K+ DL R L P H S HLF+N++
Sbjct: 17 LAVGLSIFLTALFLVNNLVYPINEHLLLKPDSLFKF-DLNRISLYPLAHLSFFHLFFNVI 75
Query: 98 SLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSG 157
S + E S G+ + +++ LL + I L SL LF + E S + F G
Sbjct: 76 STFSMIVMFEESHGT-LYTGVILNLLAVFTAIPYCLIGSL-LFPNVEIGGASGWFFSFLG 133
Query: 158 VLFAMKVVLNSRSEDYTNVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGGILAG 213
FA+K SR + + P Y A L + + PG S GH G+L G
Sbjct: 134 Y-FAVK---ESRVRNSVMITSTFSFPTLYFPVALLFVTALLAPGSSLPGHAIGLLLG 186
>gi|409392616|ref|ZP_11244170.1| hypothetical protein GORBP_101_00320 [Gordonia rubripertincta NBRC
101908]
gi|403197559|dbj|GAB87404.1| hypothetical protein GORBP_101_00320 [Gordonia rubripertincta NBRC
101908]
Length = 241
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 87/195 (44%), Gaps = 42/195 (21%)
Query: 28 RLP-WKPPVTAALLATNTLIYLRPA-----FLDSLVPSIHEVWFNPHLI---LKYKDLKR 78
RLP KP VT L+ N LI+L A F D P ++ + L+ + + R
Sbjct: 8 RLPAGKPYVTYTLIGINILIFLLCAVQAGSFGD---PGAAAIFSSGDLLKSDVAAGEYWR 64
Query: 79 FFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSL 137
S F H S H+ NM+SL G LE ++G + + A+ ++ALLG S
Sbjct: 65 LLTSGFLHFSVMHVAVNMLSLYILGRDLELALGMSRYVAVYLIALLGGSAA--------- 115
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
V+ F+ +RA + + G++ AM V+ ++ AR + L+II
Sbjct: 116 VMLFENDRALTAGASGAIYGLMGAMLVI--------------ILKARVSPVPVLLIIGFN 161
Query: 198 V------PGVSFLGH 206
V PG+S LGH
Sbjct: 162 VVLSFSLPGISVLGH 176
>gi|297817250|ref|XP_002876508.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322346|gb|EFH52767.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 269
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S H S HL +NM +L G+ QL +G+ + + L+ S + + +
Sbjct: 53 RMITSALSHISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIY 112
Query: 135 KSLVLFF--DYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAE 190
L+ F DY R AVG+S V+F +L+ + ++ GLL +P +A +
Sbjct: 113 HLLIARFKIDYFR---RVTAVGYSCVVFGWMTILSMKQPSSKLDLFGLLSLPISFAPFES 169
Query: 191 LIIIQMFVPGVSFLGHLGGILAG 213
LI + VP SFLGHL GIL G
Sbjct: 170 LIFTSIIVPQASFLGHLSGILVG 192
>gi|42569431|ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|110737035|dbj|BAF00472.1| hypothetical protein [Arabidopsis thaliana]
gi|330253108|gb|AEC08202.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 389
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 37/195 (18%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLKRFFLSPFYH 86
R ++P LL ++L + LD S+V HEVW R F + H
Sbjct: 93 RFAFQPMKENPLLGPSSLTLEKMGALDVSMVVHKHEVW-------------RLFTCIWLH 139
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
A H+ NM+SL++ GI+LE EF + + LL M G L SL + RA
Sbjct: 140 AGVFHVLANMLSLIFIGIRLE-----QEFGFVRIGLLYMISGFGGSLLSSL-----FNRA 189
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM------FVPG 200
S VG SG LF + + SE TN + ++AA LI I +P
Sbjct: 190 GIS---VGASGALFGLLGAM--LSELLTN--WTIYANKFAALLTLIFIIAINLAVGILPH 242
Query: 201 VSFLGHLGGILAGIL 215
V HLGG +G L
Sbjct: 243 VDNFAHLGGFTSGFL 257
>gi|297822631|ref|XP_002879198.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
gi|297325037|gb|EFH55457.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 37/195 (18%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLKRFFLSPFYH 86
R ++P LL ++L + LD S+V HEVW R F + H
Sbjct: 91 RFAFQPMKENPLLGPSSLTLEKMGALDVSMVVHKHEVW-------------RLFTCIWLH 137
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
A H+ NM+SL++ GI+LE EF + + LL M G L SL + RA
Sbjct: 138 AGVFHVLANMLSLIFIGIRLE-----QEFGFVRIGLLYMISGFGGSLLSSL-----FNRA 187
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM------FVPG 200
S VG SG LF + + SE TN + ++AA LI I +P
Sbjct: 188 GIS---VGASGALFGLLGAM--LSELLTN--WTIYANKFAALLTLIFIIAINLAVGILPH 240
Query: 201 VSFLGHLGGILAGIL 215
V HLGG +G L
Sbjct: 241 VDNFAHLGGFTSGFL 255
>gi|168016300|ref|XP_001760687.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688047|gb|EDQ74426.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 431
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQL-----------SRHSNIPLEELRHRR 323
W C ACTF+N G + CEMC T RS +D D+ SN LE L R
Sbjct: 36 WTCEACTFENIGETAFCEMCDTGRSTSDSRGDEFVVKDGKKKKDVQEESNHLLENLHKER 95
Query: 324 IERF 327
I R
Sbjct: 96 ISRM 99
>gi|428185760|gb|EKX54612.1| hypothetical protein GUITHDRAFT_100085 [Guillardia theta CCMP2712]
Length = 572
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 90/241 (37%), Gaps = 61/241 (25%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY--KDLKRFFLSPFYHASESH 91
P T ALL N L YL + +P IL Y ++ R F H + +H
Sbjct: 95 PTTRALLIINVLCYLFAKVGLLGKDPAASLGISPDRILLYPMREGHRLLTGIFLHLNHAH 154
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMV------VALLGMSQGITLLLAKSLVLFFDYER 145
L NM++L G ++E +GS +FA +V V L +S + L SL+ F D +
Sbjct: 155 LVSNMLALAALGNKVEDRIGSFKFALLVSLLIPSVGLAHVSTTVLLNAVGSLLGFKDTRQ 214
Query: 146 AY-----------------------YSEYAVGFSGVLFAMKVV----------------- 165
+ ++GFSG+LFA+ +
Sbjct: 215 VQLGGFLPRASVHQVVRRLVMHQISLTTVSIGFSGILFALNAIGTEMFAGGSLFCFPLSD 274
Query: 166 ------------LNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP-GVSFLGHLGGILA 212
L E L +P+ +A + ++II Q+ P VS GHL G +A
Sbjct: 275 LPPEIRLYVVKYLRRYIEKRWGSPRLCIPSYWAPYLQVIISQLADPLRVSLCGHLAGAIA 334
Query: 213 G 213
Sbjct: 335 A 335
>gi|302336842|ref|YP_003802048.1| rhomboid family protein [Spirochaeta smaragdinae DSM 11293]
gi|301634027|gb|ADK79454.1| Rhomboid family protein [Spirochaeta smaragdinae DSM 11293]
Length = 214
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
P LI+ +FF F HA+ SH+F+NM+ L + G Q+E +GS+EF + L G
Sbjct: 47 PGLIIGKGFYWQFFTYMFTHANISHIFFNMLGLFFFGTQVERRIGSSEF-LLFYLLTGFL 105
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGL-LVPAR- 184
G+ + +L Y +G SG +FA+ + + Y N++ + ++P +
Sbjct: 106 AGLFSFIVYTLT-------GMYGAVLLGASGAIFAVLLAF-AVYFPYANIYIMGIIPVKA 157
Query: 185 ------YAA---WAELIIIQMFVPGVSFLGHLGGILAGILYLKLK 220
Y A +++L+ I GV+ L HL G + Y ++
Sbjct: 158 PLLVIGYTAIELFSQLLSIN---SGVAHLTHLAGFVFAFFYFLIR 199
>gi|299538296|ref|ZP_07051581.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|424736343|ref|ZP_18164803.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
gi|298726498|gb|EFI67088.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|422949946|gb|EKU44319.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 31/191 (16%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFN----PHLILKYKDLKRFFLSPFYHASE 89
PV + L+A N +Y+ SL+PSI + +N + +++ + R F + F HA
Sbjct: 16 PVVSTLIAINLTLYVL-----SLIPSIGTLLWNYGIQANFLIQSGEWWRVFSAIFLHAGF 70
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
H+F+NM SL G +LE G F IT+ L +V Y S
Sbjct: 71 MHVFFNMFSLYLFGPELEKIAGKARF-------------ITIYLVSGIVGNMATYIFYDS 117
Query: 150 EYA-VGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
YA +G SG +F A ++ + L++P + +I+ P V+
Sbjct: 118 SYASLGASGAIFGIFGAFGALVYYTRRTMPMLRKLILPIIVIS----VIMTFLQPNVNVF 173
Query: 205 GHLGGILAGIL 215
HLGG++ G +
Sbjct: 174 AHLGGLVTGFI 184
>gi|260439384|ref|ZP_05793200.1| rhomboid family protein [Butyrivibrio crossotus DSM 2876]
gi|292808180|gb|EFF67385.1| rhomboid family protein [Butyrivibrio crossotus DSM 2876]
Length = 337
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIH---EVWFNPHLILKYKDLKRFFLSPF 84
RL V AL+A N ++Y+ A + + + ++ YK+ R F S F
Sbjct: 142 RLSRYSVVNFALIAANIIVYIIVASGGNTYNGFYLATKGGLVAKYVIDYKEYYRLFTSMF 201
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
HA HL NM+ LL+ G +E +G +A + +A G+ + LL Y
Sbjct: 202 LHAGVQHLASNMIMLLFVGDTIERIVGHVRYAIIYLA-GGLFASVGTLL---------YY 251
Query: 145 RAYYSEYA--VGFSGVLFAMKVVL-------NSRSEDYTNVHGLLVPARYAAWAELIIIQ 195
R Y YA +G SG +FA+ L R+E ++ V +L A YA ++ L
Sbjct: 252 RT-YDMYACCIGASGAIFAVMGALIYILICNRGRTEGFSIVRIILFVA-YAIYSGLT--- 306
Query: 196 MFVPGVSFLGHLGGILAGIL 215
G H+ G+L G+L
Sbjct: 307 --TQGTCNAAHIAGLLGGLL 324
>gi|210613903|ref|ZP_03289967.1| hypothetical protein CLONEX_02180 [Clostridium nexile DSM 1787]
gi|210150928|gb|EEA81936.1| hypothetical protein CLONEX_02180 [Clostridium nexile DSM 1787]
Length = 197
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 32 KPPVTAALLATNTLIYLRPAF----LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
K T + A N +++L +F D + H + P+++ +YK+ R F F H
Sbjct: 6 KAVCTIGIAAVNVIVFLLLSFGGRTEDGMYMLEHGAMYVPYVV-EYKEYYRLFTCIFLHF 64
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
SHL NM++L+ G +E +G F + + +++ + + DY +
Sbjct: 65 GFSHLMNNMLTLVVVGWNVEMFVGKARFLTIYLLSGLGGNLLSM---AADIWRQDYSVSA 121
Query: 148 YSEYAV-GFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV----PGVS 202
+ A+ G +G L + ++ + R + T G++V +I+I ++ GV
Sbjct: 122 GASGAIFGLTGALLCLAILNHGRVGNITK-QGMIV---------MILISLYTGFTSGGVD 171
Query: 203 FLGHLGGILAGILYLKL 219
L H+GG+L GIL L
Sbjct: 172 NLAHVGGLLTGILVTAL 188
>gi|338210344|ref|YP_004654393.1| rhomboid family protein [Runella slithyformis DSM 19594]
gi|336304159|gb|AEI47261.1| Rhomboid family protein [Runella slithyformis DSM 19594]
Length = 305
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 50 PAFLDSLVPSIH-EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLET 108
PA+ D ++ + FN L + L FF+ H H+F+NM+SL W G LE
Sbjct: 46 PAYYDRVMEQLRLPADFNSFLYKPWTLLTNFFV----HQGPFHIFFNMLSLYWFGRVLEE 101
Query: 109 SMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNS 168
+GS A+ + + L + +L F + + VG SG +FA+ + +
Sbjct: 102 YLGSRRLTALYLLGGLGGGLLFLAMYNTLPYF---QGELINTTLVGASGAIFAVILGAAT 158
Query: 169 RSEDYTNVHGLLVPARYAAWAELIII----QMFVPGV-SFLGHLGGILAGILYLK-LKGG 222
++T L+ P R A L II Q+ P L HL G + G ++K LK G
Sbjct: 159 LLPEHTFFVFLIGPVRLKYIAALCIIISMAQLVGPNAGGNLAHLAGAMVGFGFIKSLKKG 218
Query: 223 YSGSDPLTTI 232
+ P+ I
Sbjct: 219 HDWGAPIYAI 228
>gi|443734934|gb|ELU18790.1| hypothetical protein CAPTEDRAFT_229338 [Capitella teleta]
Length = 592
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 270 TAPIIWRCPACTFDNSGWLSICEMCG 295
T +WRCPACTFDN+ +CEMCG
Sbjct: 510 TQNDVWRCPACTFDNALERIVCEMCG 535
>gi|300781971|ref|YP_003762262.1| hypothetical protein AMED_0036 [Amycolatopsis mediterranei U32]
gi|384145172|ref|YP_005527988.1| hypothetical protein RAM_00180 [Amycolatopsis mediterranei S699]
gi|399533854|ref|YP_006546515.1| hypothetical protein AMES_0034 [Amycolatopsis mediterranei S699]
gi|299791485|gb|ADJ41860.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340523326|gb|AEK38531.1| hypothetical protein RAM_00180 [Amycolatopsis mediterranei S699]
gi|398314624|gb|AFO73571.1| hypothetical protein AMES_0034 [Amycolatopsis mediterranei S699]
Length = 266
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 78/199 (39%), Gaps = 30/199 (15%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFL------DSLVPSIHEVWFNPHLILKYKDLKRFFL 81
RL VT A+LA N L++L + L + L + + R
Sbjct: 29 RLSRSVLVTQAILAVNVLVFLLTVAQAGSLNDNDLSSAFQHGALYGDATLGHGEWWRILT 88
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
+ F H H+ NM SL G LE G F A+ +++L A + VL F
Sbjct: 89 NGFLHYGPIHIAVNMFSLWMMGRSLEQVCGRGRFLALYF--------VSMLGASASVLLF 140
Query: 142 DYERAYYSEYAVGFSGVLFAMK-----VVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
Y VG SG LF + VL R N GL++ A+ I
Sbjct: 141 GNPGGYPGT--VGASGALFGLMGAYAVTVLKLR----LNPTGLIITLALNAF-----ITF 189
Query: 197 FVPGVSFLGHLGGILAGIL 215
+PG+S GH+GG++ G L
Sbjct: 190 GIPGISIFGHIGGLVTGAL 208
>gi|381394664|ref|ZP_09920376.1| hypothetical protein GPUN_1385 [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379329631|dbj|GAB55509.1| hypothetical protein GPUN_1385 [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 211
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
LP PVT ++A N L + ++ ++ + + P +++ R S F H S
Sbjct: 4 LPKGCPVTLTIMAANILFFAGQFATQDMLTNM-GLLYGP--LVQDGQYWRMISSGFLHGS 60
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV-ALLGMSQGITLLLAKSLVLFFDYERAY 147
H+ +NM L G QLE+++GS F+ M AL+G + + L F
Sbjct: 61 ILHIAFNMYLLYMLGPQLESALGSVRFSLMYFGALIGGTLAV-------LSFGFMQPTLG 113
Query: 148 YSEYAVGFSGVLFAMKVVLNSR--SEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
S +G +G +F + L R S + V GL+V + + + +PG+SF G
Sbjct: 114 ASGAVLGLAGAMF---ITLWGRGISPTKSPVFGLVVLN--------LGLPLLIPGISFWG 162
Query: 206 HLGGILAG 213
H GG++AG
Sbjct: 163 HFGGVVAG 170
>gi|125528698|gb|EAY76812.1| hypothetical protein OsI_04771 [Oryza sativa Indica Group]
Length = 273
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL + +G + + L+ +S + L
Sbjct: 54 RIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYTLVLVVLSGLLVLGFY 113
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLL-VPARYAAWAELI 192
++ F E + AVG+S V+F M ++ + N+ G+L +P +A + LI
Sbjct: 114 HVMIQKFKVEY-FRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGVLSLPISFAPFESLI 172
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SF+GHL GI+ G
Sbjct: 173 FTSIMVPQASFIGHLSGIIVG 193
>gi|115441593|ref|NP_001045076.1| Os01g0895500 [Oryza sativa Japonica Group]
gi|57899816|dbj|BAD87561.1| unknown protein [Oryza sativa Japonica Group]
gi|113534607|dbj|BAF06990.1| Os01g0895500 [Oryza sativa Japonica Group]
gi|215686553|dbj|BAG88806.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 273
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL + +G + + L+ +S + L
Sbjct: 54 RIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYTLVLVVLSGLLVLGFY 113
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLL-VPARYAAWAELI 192
++ F E + AVG+S V+F M ++ + N+ G+L +P +A + LI
Sbjct: 114 HVMIQKFKVEY-FRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGVLSLPISFAPFESLI 172
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SF+GHL GI+ G
Sbjct: 173 FTSIMVPQASFIGHLSGIIVG 193
>gi|449126889|ref|ZP_21763164.1| hypothetical protein HMPREF9733_00567 [Treponema denticola SP33]
gi|448945092|gb|EMB25967.1| hypothetical protein HMPREF9733_00567 [Treponema denticola SP33]
Length = 209
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
P L+++ + +FF F H HL +NM++L + G+ +E +G+ EF + L+G
Sbjct: 44 PILVVEAQTYWQFFTYQFVHGDFFHLAFNMLALFFFGVPVERKIGTKEF-ILYYLLIGTI 102
Query: 127 QGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFA---MKVVLNSRSEDYT-NVHGLLVP 182
G+ L + +Y VG SG +F + V+ S Y V + P
Sbjct: 103 DGVLSFLVYA-------ATGFYIISLVGASGAIFGVLLLYAVIYPNSVVYLWAVIPVPAP 155
Query: 183 ARYAAWAELIIIQMFV--PGVSFLGHLGGILAGILYLKLKGG 222
+A + +I +F GV+ L H G+LAG +Y++++ G
Sbjct: 156 LLILGYAVIELISIFSVGDGVAHLTHFIGLLAGWVYIRIRFG 197
>gi|154422081|ref|XP_001584053.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121918298|gb|EAY23067.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 256
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
++ ++ + F SPF H+S HLF N++ + + +E G F M V L + G+T
Sbjct: 49 IEIRNFWKLFTSPFVHSSFPHLFLNIVFIWQRFSHIEKRAGM-AFLFMHVFLFSVLIGLT 107
Query: 131 LLLAKSLVLFFDYERAY--YSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLL-VPARYA 186
+++ F + Y + +G + +L A+ V+ + S + Y+++ GL+ VP R+
Sbjct: 108 Y---SGIIILFSVAGCFGLYYKPVIGMTSILLALNVIESQLSSNPYSSLLGLIHVPTRWL 164
Query: 187 AWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKGG-----YSGSDPL 229
A I + + VS H+ + G Y + G + +DP+
Sbjct: 165 PIAISITYHIALSNVSTFAHICALTVGYTYWLIVGKGLRRLWGTTDPM 212
>gi|441514647|ref|ZP_20996463.1| rhomboid family protein [Gordonia amicalis NBRC 100051]
gi|441450558|dbj|GAC54424.1| rhomboid family protein [Gordonia amicalis NBRC 100051]
Length = 294
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 40/189 (21%)
Query: 32 KPPVTAALLATNTLIYL----RPAFLDSLVPSIHEVWFNPHLI---LKYKDLKRFFLSPF 84
KP VT L+ N L++L + F D P ++ + L+ + + R S F
Sbjct: 67 KPYVTYTLIGINILVFLLCVAQAGFGD---PGAATIFSSGDLLKSDVAAGEYWRLLTSGF 123
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
H S H+ NM+SL G LE ++G + A+ ++ALLG S + V+ F+
Sbjct: 124 LHFSVMHVAVNMLSLYILGRDLELALGMARYLAVYLIALLGGS---------AAVMLFEN 174
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV----- 198
+RA + + G++ AM V+ ++ AR + L+II V
Sbjct: 175 DRALTAGASGAIYGLMGAMLVI--------------ILKARVSPVPVLLIIGFNVVLSFS 220
Query: 199 -PGVSFLGH 206
PG+S LGH
Sbjct: 221 LPGISVLGH 229
>gi|422012514|ref|ZP_16359194.1| peptidase, S54 family [Actinomyces georgiae F0490]
gi|394755698|gb|EJF38895.1| peptidase, S54 family [Actinomyces georgiae F0490]
Length = 305
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFL--SPFYHASESH 91
PVT L+ L+YL L +VP++ ++ L+ + + + + S F H+ H
Sbjct: 91 PVTLVLIGACVLMYL----LALVVPAVQSLFM---LVPAWVGPRPWIVVTSAFLHSGFLH 143
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY-ERAYYSE 150
+F+NM++L W G +E ++G + A+ + I+ L +LV+ + + + A
Sbjct: 144 VFFNMLTLYWVGSVVERAIGHWRYGAVCL--------ISALGGSALVMLWCFVQPAALFA 195
Query: 151 YAVGFSGV---LFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHL 207
VG SG LF VL S T +L+ ++ PGVS+ H+
Sbjct: 196 ATVGASGAVFGLFGAVFVLQRLSGSSTAPILILLGIN-------LVYGFANPGVSWQAHI 248
Query: 208 GGILAG 213
GG LAG
Sbjct: 249 GGFLAG 254
>gi|375098380|ref|ZP_09744643.1| putative membrane protein [Saccharomonospora cyanea NA-134]
gi|374659112|gb|EHR58990.1| putative membrane protein [Saccharomonospora cyanea NA-134]
Length = 333
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 39 LLATNTLIYLRPAFLDSLVPSIHEV-WFN-----PHLILKYKDLKRFFLSPFYHASESHL 92
L+A N ++Y F V S H FN P +++ + + R S F H HL
Sbjct: 114 LIAVNVIVYALTVFQARDVMSNHNSPVFNDGVLWPEVVVLFDEWWRLLTSGFLHYGLLHL 173
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
NM++L G LE +G F A V L M G + V F + +
Sbjct: 174 AMNMLALWVLGRDLEMLLGRVRFLA--VYFLSMFAG------GAAVFVFGDPATGTAGAS 225
Query: 153 VGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILA 212
G++ A+ V + + T G++V +II + +P +S LGHLGG++A
Sbjct: 226 GAIYGLMGAILVAVLRLRLNPTTAIGIIVLN--------VIISVSIPNISLLGHLGGLVA 277
Query: 213 G 213
G
Sbjct: 278 G 278
>gi|335357178|ref|ZP_08549048.1| rhomboid family integral membrane protein [Lactobacillus animalis
KCTC 3501]
Length = 224
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 24 NEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEV-W---FNPHLILKYKDLKRF 79
N +H+ KP VT L+A N L+++ +++ + W +NP +I +L R
Sbjct: 2 NSFHK---KPIVTYGLIAVNLLVFIGMTLSGGTQNAVNLIAWGAKYNPLII--QGELWRL 56
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F F H HL N+++L + G+QLE G F A+ L+ G L A S
Sbjct: 57 FTPMFIHIGLEHLALNLLTLYFLGVQLEQLFGKWRFLALY--LISGVGGNILSFALS--- 111
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQ---- 195
+ + G S LF + E + + + +R + LI++
Sbjct: 112 ---------NNISAGASTSLFGLFGAYLMLGESFRQNQYIRMISR--QFLVLIVLNLGFD 160
Query: 196 MFVPGVSFLGHLGGILAGIL 215
+F G+ GHLGG+LAG L
Sbjct: 161 LFAGGIDIWGHLGGLLAGFL 180
>gi|359419226|ref|ZP_09211185.1| putative rhomboid family protein [Gordonia araii NBRC 100433]
gi|358244841|dbj|GAB09254.1| putative rhomboid family protein [Gordonia araii NBRC 100433]
Length = 218
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R S F H S H+ NM+SL+ G +E +G+ F + +VAL G S +TLL
Sbjct: 44 RLLTSGFLHLSIMHIAVNMISLVLLGTIIEPILGTARFLLVYLVALFGGSAAVTLLSGT- 102
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
+ A S G G + + +VL ++ + A A I I +
Sbjct: 103 -----NTATAGASGAIYGLMGAM--LVIVLKFKAPAGQVI---------AIIAVNIFISI 146
Query: 197 FVPGVSFLGHLGGILAGIL 215
VPG+S +GHLGG+L G L
Sbjct: 147 SVPGISLVGHLGGLLFGTL 165
>gi|389861448|ref|YP_006363688.1| rhomboid family protein [Thermogladius cellulolyticus 1633]
gi|388526352|gb|AFK51550.1| Rhomboid family protein [Thermogladius cellulolyticus 1633]
Length = 447
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 25 EYHRLPWKPPVTAALLATNTLIYLRPAF----LDSLVPSIHEVWFNPHLILK--YKDLKR 78
Y R P P +T L+A NT +Y+ ++ L+S SI+ + F P+L+ + L R
Sbjct: 7 SYRRGP-PPYLTIGLIAANTAVYVYTSYQNYLLESSAWSIYSLGFTPYLLFSSPVQGLIR 65
Query: 79 FFLSPFYHASESHLFYNMMSLLWKGIQLETSMG 111
F + F HA H+F+NM L G +E +G
Sbjct: 66 VFTAMFTHADILHIFFNMYFLYLFGYSVENYLG 98
>gi|242059531|ref|XP_002458911.1| hypothetical protein SORBIDRAFT_03g042510 [Sorghum bicolor]
gi|241930886|gb|EES04031.1| hypothetical protein SORBIDRAFT_03g042510 [Sorghum bicolor]
Length = 273
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL + +G + + L+ +S + L
Sbjct: 54 RIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYTLVLVVLSGLLVLGFY 113
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAELI 192
++ F E + AVG+S V+F +L ++ N+ G+L +P +A + LI
Sbjct: 114 HMMIQRFKVEY-FRRVTAVGYSCVVFGWMTILAAKQPSSKLNIFGVLSLPISFAPFESLI 172
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SF+GHL GI+ G
Sbjct: 173 FTSIMVPQASFIGHLSGIIVG 193
>gi|381179391|ref|ZP_09888244.1| Rhomboid family protein [Treponema saccharophilum DSM 2985]
gi|380768686|gb|EIC02672.1| Rhomboid family protein [Treponema saccharophilum DSM 2985]
Length = 229
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 36 TAALLATNTLIYLRPAFLDSLVP------SIHEVWFNPHLILKYKDLKRFFLSPFYHASE 89
T +++A N ++Y F +L+P SI+ V F H ++ L F+ H +
Sbjct: 21 TLSIIAINAVVYFLFNF-TNLIPVGEDYFSINVVGFVFHQCF-WQPLTYMFM----HGNI 74
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAM--VVALLG--MSQGITLLLAKSLVLFFDYER 145
HLF+NM+ LL+ G+Q+E ++GS EF M VV +L S G+ L ++ Y
Sbjct: 75 QHLFFNMLGLLFFGMQVERALGSKEFVMMYLVVGVLSGLFSVGVYYALGAYMISQGMYPY 134
Query: 146 AYYSEYAVGFSGVLFAMKV---VLNSRSEDYT-NVHGLLVPARYAAWAELIIIQMFVPG- 200
Y VG SG ++ + + V+ RS + V + P A+A + + F G
Sbjct: 135 TYLVS-LVGASGAIYGILLAYAVIFPRSRIFVWFVIPVPAPILVIAYAVIEFVSQFTGGS 193
Query: 201 -VSFLGHLGGILAGILYLKLKGG 222
V+ HL G LY+ ++ G
Sbjct: 194 NVAHQTHLAGFAFAFLYMLVRMG 216
>gi|399526757|ref|ZP_10766509.1| peptidase, S54 family [Actinomyces sp. ICM39]
gi|398362686|gb|EJN46363.1| peptidase, S54 family [Actinomyces sp. ICM39]
Length = 290
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 32 KPPVTAALLATNTLIY----LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
P VT A++ T L+Y L PA +L ++ W H + L FL H
Sbjct: 71 APVVTYAMMTTCVLMYVLTWLAPALTSAL--ALVPAWLMAH---PWTILTGAFL----HG 121
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H+ +NM+SL W G +E MG F + V L+ G ++A L+ + +
Sbjct: 122 GLLHILFNMLSLYWVGRAIEPVMGWWRF--LTVYLVSALGGSAFIIAWCLIQPSEIYVST 179
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHL 207
A F G+ A+ V+ D T + LL ++ V G+S+ GH+
Sbjct: 180 VGASAAVF-GLFGAVFVLQRLGGSDTTAILTLL--------GVNLVYGFMVSGISWQGHI 230
Query: 208 GGILAGI 214
GG +AG+
Sbjct: 231 GGAIAGV 237
>gi|414876345|tpg|DAA53476.1| TPA: hypothetical protein ZEAMMB73_598699 [Zea mays]
Length = 663
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 89/221 (40%), Gaps = 48/221 (21%)
Query: 14 MLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY 73
+ P L AF + P P +A LL A S V HE W
Sbjct: 111 LAPELGRFAFQSFKENPLIGPSSATLLEMG-------ALETSKVTKDHEGW--------- 154
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
R + HA H+ NM+SLL GI+LE EF + + L + G+ L
Sbjct: 155 ----RLITCIWLHAGVVHILANMLSLLMIGIRLE-----KEFGFIRIGTLYVISGVGGSL 205
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
SL + S +VG SG LF + + + SE TN + ++AA L++
Sbjct: 206 LSSLFMV--------SNISVGASGALFGL--LGSMLSELITN--WTIYENKFAALLTLVM 253
Query: 194 IQM------FVPGVSFLGHLGGILAG-----ILYLKLKGGY 223
I + +P V HLGG ++G +L ++ + GY
Sbjct: 254 IILINLAVGILPHVDNFAHLGGFMSGFCLGFVLLMRPQFGY 294
>gi|410906125|ref|XP_003966542.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Takifugu rubripes]
Length = 1035
Score = 45.8 bits (107), Expect = 0.027, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 267 TRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSD 306
T +P +W C ACT+ NS L CEMC RS + L SD
Sbjct: 628 TSDPSPEVWSCGACTYSNSSLLPYCEMCEYPRSSSALKSD 667
>gi|401623399|gb|EJS41500.1| rbd2p [Saccharomyces arboricola H-6]
Length = 262
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 38 ALLATNTLIYLRPAFLDSLVPSI-HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNM 96
A L T +++L FL S V ++ ++ P + K + + R L P H S HL +N+
Sbjct: 15 AALTTGLVVFLTAVFLLSFVFALGDDLSLAPESLFKLQ-MSRLSLYPLIHLSLPHLLFNV 73
Query: 97 MSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFS 156
+++ W + L + + + L + GI L L+ Y + G S
Sbjct: 74 LAI-WAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLL--------YPGVFVAGAS 124
Query: 157 G---VLFAMKVVLNSRSEDYTNVH--GLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
G LFA S+ T + VP Y A LI I + VPG SF GH G+
Sbjct: 125 GWCFTLFAYYSYKESQVRPRTRLFHTEYSVPTLYTPIALLIAIAVIVPGSSFWGHFFGLC 184
Query: 212 AG 213
G
Sbjct: 185 VG 186
>gi|390630603|ref|ZP_10258582.1| Membrane-associated serine protease [Weissella confusa LBAE C39-2]
gi|390484160|emb|CCF30930.1| Membrane-associated serine protease [Weissella confusa LBAE C39-2]
Length = 233
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 85/216 (39%), Gaps = 55/216 (25%)
Query: 25 EYHRLPWKPPVTAALLATNTLIYLRPAFL-DSLVPSIHEVW-----FNPHLILKYKDLKR 78
E+ R P T+AL+A ++YL A + S S ++ F P ++L Y + R
Sbjct: 4 EFKRAFKATPATSALVAFMVVVYLWEALIAQSFTISSRVLYETGAQFGP-IVLHYGEWWR 62
Query: 79 FFLSPFYHASESHLFYNMMSLLWKGIQLETSMG------------------SNEFAAMVV 120
+ F H + SHL +NM++L + G LE +G S F AM V
Sbjct: 63 LLTAGFLHVTASHLIFNMITLYFIGRLLELEIGPWRFLILFLTTVISGNLMSLAFGAMNV 122
Query: 121 ALLGMSQGITLLLAKSLVL-FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGL 179
G S G+ L + L D RAY+ RS+ +
Sbjct: 123 ISAGASGGVFGLFGAIVRLGLMDKRRAYW--------------------RSQAKLMTAFV 162
Query: 180 LVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
L+ +I +F PG+ H+GG++ G L
Sbjct: 163 LLS---------VISALFTPGIDLAAHIGGLIGGFL 189
>gi|404260618|ref|ZP_10963899.1| hypothetical protein GONAM_52_00550 [Gordonia namibiensis NBRC
108229]
gi|403400926|dbj|GAC02309.1| hypothetical protein GONAM_52_00550 [Gordonia namibiensis NBRC
108229]
Length = 241
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 32 KPPVTAALLATNTLIYLRPA-----FLDSLVPSIHEVWFNPHLI---LKYKDLKRFFLSP 83
KP VT L+ N LI+L A F D P ++ + L+ + + R S
Sbjct: 13 KPYVTYTLIGINILIFLLCAVQAGSFGD---PGAATIFSSGDLLKSDVAAGEYWRLLTSG 69
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFD 142
F H S H+ NM+SL G LE ++G + + A+ ++ALLG S V+ F+
Sbjct: 70 FLHFSVMHVAVNMLSLYILGRDLELALGMSRYLAVYLIALLGGSAA---------VMLFE 120
Query: 143 YERAYYSEYAVGFSGVLFAMKV-VLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
+RA + + G++ AM V +L +R+ VP +++ +PG+
Sbjct: 121 NDRALTAGASGAIYGLMGAMLVIILKARASP--------VPVLLIIGFN-VVLSFSLPGI 171
Query: 202 SFLGH 206
S LGH
Sbjct: 172 SVLGH 176
>gi|356557245|ref|XP_003546928.1| PREDICTED: rhomboid-related protein 3-like [Glycine max]
Length = 324
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 68 HLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQ 127
L++ ++ RFF F HA HL NM SLL+ G++LE EF + + LL +
Sbjct: 102 ELVVDQNEVWRFFSCMFLHAGVVHLLANMFSLLFIGVRLE-----KEFGFLKIGLLYVLS 156
Query: 128 GITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTN----VHGLLVPA 183
G S++ + + + +VG SG LF + + SE TN + +L P
Sbjct: 157 G----FGGSVLSVLHLKESEANTVSVGASGALFGLLGAM--LSELLTNWSIYANKVLYPC 210
Query: 184 --RYAAWAELIII------QMFVPGVSFLGHLGGILAG 213
+ AA L+II F+P V H+GG LAG
Sbjct: 211 LLQCAALTSLLIIVGLNLAVGFLPHVDNSAHVGGFLAG 248
>gi|345851676|ref|ZP_08804644.1| hypothetical protein SZN_17977 [Streptomyces zinciresistens K42]
gi|345636882|gb|EGX58421.1| hypothetical protein SZN_17977 [Streptomyces zinciresistens K42]
Length = 295
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 33/193 (17%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEV--W----FNPHLILKYKDLKRFFLSPFYHAS 88
VT L+A N +++ SL ++ + W F P + + R S F H +
Sbjct: 84 VTKILVAVNLAVFIAVQSSQSLRNDLYLIGSWPPAPFQPTQGVAEGEWWRLVTSMFTHEA 143
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
H +NM+SL W G LE ++G + A+ T LLA
Sbjct: 144 VWHFAFNMLSLWWLGGPLEAALGRARYLALYFCSGLAGSAFTYLLADP------------ 191
Query: 149 SEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG--VS 202
++G SG +F A V+L D + LLV + +I F PG +S
Sbjct: 192 HTASLGASGAIFGLFGATAVLLRRLQYDMRPIIALLV---------INLIFTFAPGFNIS 242
Query: 203 FLGHLGGILAGIL 215
+ H+GG++AG++
Sbjct: 243 WQAHIGGLVAGVI 255
>gi|332017348|gb|EGI58092.1| Calpain-D [Acromyrmex echinatior]
Length = 1370
Score = 45.4 bits (106), Expect = 0.035, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 14/71 (19%)
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSD--------------QLSR 310
S TR + I W+C CT++N +ICEMC +S+S + +S D ++ R
Sbjct: 695 SRTRDPSYIQWQCKLCTYENKSTTAICEMCQSSKSLSQVSGDRGIPRLLESGTSTLRIQR 754
Query: 311 HSNIPLEELRH 321
++ +E LR
Sbjct: 755 QESVVMENLRQ 765
>gi|425737376|ref|ZP_18855649.1| hypothetical protein C273_03260 [Staphylococcus massiliensis S46]
gi|425482724|gb|EKU49880.1| hypothetical protein C273_03260 [Staphylococcus massiliensis S46]
Length = 484
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNP----------HLILKYKDLKRFFLS 82
P+T L+ N +I+ +L+ +H F H + + + R S
Sbjct: 156 SPITYGLILLNVIIW-------ALINILHHNEFTDLKLIDLGALAHFNVVHGEWHRLITS 208
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFD 142
F H + H+ +NM+SL G LE+ +GS + V +L G + LA S F
Sbjct: 209 MFLHLNFEHILFNMLSLFIFGKLLESILGS--WRMFGVYMLSGIIGNLVTLAFSPDTF-- 264
Query: 143 YERAYYSEYAVGFSGVLFAM-----KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
++G SG +F + ++ S+ D + LL+ A +++I +F
Sbjct: 265 ---------SLGASGAIFGLIGSLIACMIISQKFDQRTIGQLLL-----ALLIMVVISLF 310
Query: 198 VPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIY 257
+ ++ L H+GG+L G+L L + L II T ++ L ++ + IY
Sbjct: 311 ISNINVLAHIGGLLGGVLVTFLGYYFLKDRKLFWIIIACTAFVALLLLIKIFVTQTDNIY 370
Query: 258 GR 259
R
Sbjct: 371 NR 372
>gi|398390255|ref|XP_003848588.1| hypothetical protein MYCGRDRAFT_63728 [Zymoseptoria tritici IPO323]
gi|339468463|gb|EGP83564.1| hypothetical protein MYCGRDRAFT_63728 [Zymoseptoria tritici IPO323]
Length = 270
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 6/198 (3%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
+ + L+R L P H + H N+++ + + E+ G+ A+ G+ G+
Sbjct: 49 INLQTLRRLNLFPMLHTNFFHYLLNLIAFVPLVERFESEHGTIVTFALFTGPFGLLPGLL 108
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAE 190
+ + VL + S + +L + + + R + + + +P
Sbjct: 109 YTVLERYVLRMNTTVVGASVWVF----LLLSNEAIKTYRQNPHFEISDVKIPTWTTPLFL 164
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYL 250
+++I + VPG S LGHL G L G YL G P I+R G L+ R Y+
Sbjct: 165 IVVIWVLVPGTSLLGHLCGALVG--YLWGLGYIRFLAPHDKILRWVEGKLNLLGRLPHYV 222
Query: 251 FRRPRIYGRGTVGGSDTR 268
+ YGR V + +R
Sbjct: 223 SVDQKTYGRYGVLPTSSR 240
>gi|379706281|ref|YP_005261486.1| putative membrane-bound rhomboid protease [Nocardia cyriacigeorgica
GUH-2]
gi|374843780|emb|CCF60842.1| putative membrane-bound rhomboid protease [Nocardia cyriacigeorgica
GUH-2]
Length = 247
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 33 PPVTAALLATNTLIY-LRPAFLDSLVPSIHE-------VWFNPHLILKYKDLKRFFLSPF 84
P VT AL+A N ++ + A SLV + + V F P + D R S F
Sbjct: 28 PYVTYALIAVNVAVFAVTAAQARSLVDNYNGSSLFLRWVMFPPAV--ADGDWVRVIGSGF 85
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
H HL NM +L G +E +G + + A+ +V+LLG S + + SL
Sbjct: 86 LHYGPIHLLLNMFALYVVGRDIELVLGRSRYLAVYLVSLLGGSAAVMVFSQDSLT----- 140
Query: 144 ERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
G SG ++ A+ V+L ++ TN+ ++ + I +P
Sbjct: 141 ---------AGASGAVYGLFGAITVILIRLRQNATNMFIII--------GINVFISFSLP 183
Query: 200 GVSFLGHLGGILAGIL 215
G+S GHLGG+ AG L
Sbjct: 184 GISLFGHLGGLAAGTL 199
>gi|343928757|ref|ZP_08768202.1| hypothetical protein GOALK_120_01840 [Gordonia alkanivorans NBRC
16433]
gi|343761506|dbj|GAA15128.1| hypothetical protein GOALK_120_01840 [Gordonia alkanivorans NBRC
16433]
Length = 238
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 41/190 (21%)
Query: 32 KPPVTAALLATNTLIYLRPA-----FLDSLVPSIHEVWFNPHLI---LKYKDLKRFFLSP 83
KP VT L+ N LI+L A F D P ++ + L+ + + R S
Sbjct: 10 KPYVTYTLIGINILIFLLCAVQAGSFGD---PGAATIFSSGDLLKSDVAAGEYWRLLTSG 66
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFD 142
F H S H+ NM+SL G LE ++G + + A+ ++ALLG S V+ F+
Sbjct: 67 FLHFSVMHVAVNMLSLYILGRDLELALGMSRYLAVYLIALLGGSAA---------VMLFE 117
Query: 143 YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV---- 198
+RA + + G++ AM VV ++ AR + L+II V
Sbjct: 118 NDRALTAGASGAIYGLMGAMLVV--------------ILKARVSPVPVLLIIGFNVVLSF 163
Query: 199 --PGVSFLGH 206
PG+S LGH
Sbjct: 164 SLPGISVLGH 173
>gi|375092943|ref|ZP_09739208.1| putative membrane protein [Saccharomonospora marina XMU15]
gi|374653676|gb|EHR48509.1| putative membrane protein [Saccharomonospora marina XMU15]
Length = 309
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 28/199 (14%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPA-----FLDSLVPSIHE---VWFNPHLILKYKDLKRF 79
R+ +P VT L+A N L+Y+ A F+ + V + +W P I + R
Sbjct: 87 RVSQRPVVTPVLIALNLLVYVLTAVQAQDFMRNDVSRLFNDGVLW--PVGIAAADEWWRL 144
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLV 138
S F H H+ NM++L G LE +G F A+ V++LG S + V
Sbjct: 145 VTSGFLHFGLLHIGMNMLALWILGRDLELLLGKVRFLAVYFVSMLGGS---------AAV 195
Query: 139 LFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV 198
F + + G++ A+ V + + T G++V +++ + +
Sbjct: 196 FAFGAVNTGTAGASGAIYGLMGAILVAVLRLRLNPTAAIGIIVLN--------VVLTISI 247
Query: 199 PGVSFLGHLGGILAGILYL 217
PG+S LGHLGG++ G L +
Sbjct: 248 PGISLLGHLGGLVVGALAM 266
>gi|298711414|emb|CBJ32555.1| MutS protein homolog 3 [Ectocarpus siliculosus]
Length = 1474
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 263 GGSDTRRTAPIIWRCPACTFDNSGWLSICEMCG 295
G DTRR+A W+CP CTF+N CEMCG
Sbjct: 70 AGGDTRRSAD--WQCPKCTFNNPAAKRACEMCG 100
>gi|219363065|ref|NP_001136563.1| putative Rhomboid family protein [Zea mays]
gi|194696188|gb|ACF82178.1| unknown [Zea mays]
gi|195635987|gb|ACG37462.1| rhomboid family protein [Zea mays]
gi|413951669|gb|AFW84318.1| putative Rhomboid family protein [Zea mays]
Length = 275
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLET----SMGSNEFAAMVVALLGMSQGITLLL 133
R S F H S HL +NM S LW +E +G + + L+ +S + L
Sbjct: 54 RVITSAFSHVSVVHLVFNM-SALWSLGAVEQLGQIGLGVEYYLHYTLVLVVLSGLLVLGF 112
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAEL 191
++ F E + AVG+S V+F +L ++ N+ G+L +P +A + L
Sbjct: 113 YHVMIQRFKVEY-FRRVTAVGYSCVVFGWMTILAAKQPSSKLNIFGVLSLPISFAPFESL 171
Query: 192 IIIQMFVPGVSFLGHLGGILAG 213
I + VP SF+GHL GI+ G
Sbjct: 172 IFTSIMVPQASFIGHLSGIIVG 193
>gi|319787457|ref|YP_004146932.1| rhomboid family protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465969|gb|ADV27701.1| Rhomboid family protein [Pseudoxanthomonas suwonensis 11-1]
Length = 226
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 37/208 (17%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVW----FNPHLILKYKDLKRFFLSPFYHAS 88
PPVT ALL N ++L L S +W F+P + + F H S
Sbjct: 7 PPVTKALLIANVAVFLLQLVLGDTTFSAFMLWPPLGFDPFWPAQSFQPWQLLSYGFLHGS 66
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAA-MVVALLGMSQGITLLLAKSLVLFFDYERAY 147
HLF+NM++L G LE++ G F +V + G L + LV ++
Sbjct: 67 LGHLFFNMLALYMFGAPLESTWGPRRFLTYWLVTVAGAG------LCQLLVGWWAVSSGS 120
Query: 148 YSEYAVGFSGVLFAMKVV----------------LNSRSEDYTNVHGLLVPARYAAWAEL 191
+G SG +F + + + ++ + V G+ AEL
Sbjct: 121 PPYPTIGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTFVIVFGV---------AEL 171
Query: 192 II-IQMFVPGVSFLGHLGGILAGILYLK 218
++ + + PGV+ HLGG+L G L ++
Sbjct: 172 VLGMTGWQPGVAHFAHLGGMLFGWLVIR 199
>gi|298713340|emb|CBJ33566.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 677
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
++ R F + F H HL +N M W +LE +G+ + + + L+ + + +++
Sbjct: 234 REYWRLFTASFSHFEPLHLVFNAMGT-WNTRELERLLGTFRYLYLSLDLVVTTIMVVMVI 292
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL------------- 180
+LV + E + AVGFS VLFA L ++ + L
Sbjct: 293 KHALVKWRGVESQREGK-AVGFSCVLFAYMTYLAVAMREFCPIGTLCFSTYSIPMFWGMP 351
Query: 181 -VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
+P +A I Q+ +P +FLGHL GI G L
Sbjct: 352 SLPVNLGPFASQAIAQVVMPRAAFLGHLSGIFMGYL 387
>gi|420152492|ref|ZP_14659536.1| peptidase, S54 family [Actinomyces massiliensis F0489]
gi|394764617|gb|EJF46356.1| peptidase, S54 family [Actinomyces massiliensis F0489]
Length = 279
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKS 136
RF + F HAS HL +NM +L G LE +G FAA+ ++ LG S I L + +
Sbjct: 113 RFMTTAFLHASLMHLAFNMWALWVLGSALEPILGRWRFAALCALSALGGSTMIYWLASPT 172
Query: 137 LVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
A + VG SG +F A+ ++ D + + GLLV +
Sbjct: 173 -------APASWLTSTVGASGAVFGLFAALFIIQRRFGRDTSAIVGLLV--------LNL 217
Query: 193 IIQMFVPGVSFLGHLGGILAGILYLKL 219
I +S+ GHLGG++ G + L
Sbjct: 218 AISFIGANISWQGHLGGLVTGAIVAAL 244
>gi|384563997|ref|ZP_10011101.1| putative membrane protein [Saccharomonospora glauca K62]
gi|384519851|gb|EIE97046.1| putative membrane protein [Saccharomonospora glauca K62]
Length = 330
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFL------DSLVPSIHEVWFNPHLILKYKDLKRFFL 81
R+P + V L+A N ++Y AF + L P + P ++ + R
Sbjct: 102 RVPGRLVVVPLLIAVNVVVYALTAFQAGDVMNNYLSPVFADGVLWPEAVVLIDEWWRLLT 161
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
S F H HL NM++L G LE +G F A V L M A ++ +F
Sbjct: 162 SGFLHYGLLHLAMNMLALWVLGRDLEMLLGRVRFLA--VYFLSM-------FAGAVAVFV 212
Query: 142 DYERAYYSEYAVG-FSGVLFAMKV-VLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
E + A G G++ A+ V VL R T + +++ + + M +P
Sbjct: 213 LGEPGTATAGASGAIYGLMGAVLVAVLRLRLNPTTAIAIIVLN---------VFLSMSIP 263
Query: 200 GVSFLGHLGGILAG 213
+S LGHLGG++AG
Sbjct: 264 NISLLGHLGGLVAG 277
>gi|261408389|ref|YP_003244630.1| Rhomboid family protein [Paenibacillus sp. Y412MC10]
gi|261284852|gb|ACX66823.1| Rhomboid family protein [Paenibacillus sp. Y412MC10]
Length = 204
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 41/197 (20%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK----------RFFLSP 83
PVT+ LL N ++++ + SI NP +LKY L R+F +
Sbjct: 17 PVTSLLLVINLVMFV--------ITSIDGGSRNPMTLLKYGALSDLPQFVDQAWRYFTAM 68
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL +N +LL LE MGS +FA ++ LL G + LA Y
Sbjct: 69 FLHNGFDHLLFNSFALLVFVPPLERIMGSWKFA--ILYLLSGVLGNVIGLAY-------Y 119
Query: 144 ERAYYSEYAVGFSGVLFA-----MKVVLNSRSEDYTNVHGLLVPARYAAWAELI--IIQM 196
ER + VG SG ++ + + L + H + +R + LI I+
Sbjct: 120 ERMDSYTFLVGASGAIYGAYGAYLYIALFQQ-------HVIDESSRKTLFTLLILGILFS 172
Query: 197 FVPGVSFLGHLGGILAG 213
F PGVS + H+GG++ G
Sbjct: 173 FTPGVSLVAHVGGLVGG 189
>gi|311112557|ref|YP_003983779.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
gi|310944051|gb|ADP40345.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
Length = 261
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYK------DLKRFFLSPFYH 86
P VT L+ N ++YL L ++P + W LK+ + R S F H
Sbjct: 73 PYVTYTLIGINVVVYL----LQLIIP---QYWVYSMFALKWDYTEFTGEYYRVLTSGFLH 125
Query: 87 ASE--SHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
+ SH+ NM+SL GI LE MG + + +++++G S G+ LL +
Sbjct: 126 SQNDYSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLLSIVGGSFGVLLLDDPTA------ 179
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
E S G G + VVL R N+ L++ A + VPG+S+
Sbjct: 180 EVVGASGGIFGLIGAYLVIMVVLRERD----NIRALMIMI-----AVNVAFGFLVPGISW 230
Query: 204 LGHLGGILAGIL 215
H GG + G L
Sbjct: 231 QAHAGGFVIGAL 242
>gi|229818522|ref|YP_002880048.1| rhomboid family protein [Beutenbergia cavernae DSM 12333]
gi|229564435|gb|ACQ78286.1| Rhomboid family protein [Beutenbergia cavernae DSM 12333]
Length = 315
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 21/143 (14%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
RF + F H HL +NM +L G LE +G +AA+ +++ +G S G LLLA
Sbjct: 150 RFLSAAFLHGGLLHLAFNMYALWIVGGFLEQMLGRWRYAALFLLSAIGGSVGY-LLLADP 208
Query: 137 LVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
L RA+ + VG SG +F A+ VL S + + + L+ A +
Sbjct: 209 L------SRAW-TIPVVGASGAVFGLFAAIVFVLRSTGRNASQILVLI--------AINV 253
Query: 193 IIQMFVPGVSFLGHLGGILAGIL 215
+I VPG+++ HLGG++ G L
Sbjct: 254 VIGFVVPGIAWQAHLGGMVTGAL 276
>gi|329929395|ref|ZP_08283143.1| peptidase, S54 family [Paenibacillus sp. HGF5]
gi|328936482|gb|EGG32927.1| peptidase, S54 family [Paenibacillus sp. HGF5]
Length = 204
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 41/197 (20%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK----------RFFLSP 83
PVT+ LL N ++++ + S NP +LKY L R+F +
Sbjct: 17 PVTSLLLVINLVMFV--------ITSFDGGSRNPMTLLKYGALSDLPQFVDQAWRYFTAM 68
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL +N +LL LE MGS +FA ++ LL G + LA Y
Sbjct: 69 FLHNGFDHLLFNSFALLVFVPPLERIMGSWKFA--ILYLLSGVLGNVIGLAY-------Y 119
Query: 144 ERAYYSEYAVGFSGVLFA-----MKVVLNSRSEDYTNVHGLLVPARYAAWAELI--IIQM 196
ER + VG SG ++ + + L R H + +R + LI I+
Sbjct: 120 ERMEDYTFLVGASGAIYGAYGAYLYIALFQR-------HVIDESSRKTLFTLLILGILFS 172
Query: 197 FVPGVSFLGHLGGILAG 213
F PGVS + H+GG++ G
Sbjct: 173 FTPGVSLVAHVGGLVGG 189
>gi|121702479|ref|XP_001269504.1| mitochondrial translation initiation factor, putative [Aspergillus
clavatus NRRL 1]
gi|119397647|gb|EAW08078.1| mitochondrial translation initiation factor, putative [Aspergillus
clavatus NRRL 1]
Length = 1009
Score = 44.7 bits (104), Expect = 0.056, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 252 RRPRIYGRGTVGGSDT--RRTAP----IIWRCPACTFDNSGWLSICEMCGTSRSGNDLSS 305
RRP R ++ RR P I W CPAC +D G SIC C T R G D ++
Sbjct: 161 RRPGFQKRQPEKKTEQNPRRNGPNLRSIDWICPACNYDCFGKHSICPRCDTPRPGVDGTA 220
Query: 306 DQLSRHSNIPLEELR 320
Q +R S + E++R
Sbjct: 221 HQAARRSMLA-EDVR 234
>gi|381163863|ref|ZP_09873093.1| putative membrane protein [Saccharomonospora azurea NA-128]
gi|379255768|gb|EHY89694.1| putative membrane protein [Saccharomonospora azurea NA-128]
Length = 317
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHE--------VWFNPHLILKYKDLKRF 79
R+P + V L+A N ++Y AF S + H +W P ++ + R
Sbjct: 87 RVPQRLVVVPLLIAINVVVYALTAFQASDAMNNHNSPVFADGVLW--PEAVVVLDEWWRL 144
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
S F H HL NM++L G LE +G F A+ L M A
Sbjct: 145 LTSGFLHYGLIHLAMNMLALWVLGRDLEMLLGRVRFVALY--FLSMF---AGGAAVFAFG 199
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
D A S G G + VL R T + G++V +I+ + +P
Sbjct: 200 AADTGTAGASGAIYGLMGAILV--AVLRLRLNPTTAI-GIIVLN--------VILSVSIP 248
Query: 200 GVSFLGHLGGILAGILYL 217
+S LGHLGG++AG L +
Sbjct: 249 NISLLGHLGGLVAGALAM 266
>gi|392418856|ref|YP_006455461.1| putative membrane protein [Mycobacterium chubuense NBB4]
gi|390618632|gb|AFM19782.1| putative membrane protein [Mycobacterium chubuense NBB4]
Length = 285
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 17/193 (8%)
Query: 22 AFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFL 81
A R P VT AL+ N L+++ L SL P + + DL R
Sbjct: 61 ALGGQRRRSAAPVVTYALIGLNVLMFV----LQSLSPDVERALVLWPPAVAGGDLYRLLT 116
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLF 140
+ F H +H+ +NM +L G LE ++G + A+ +++ LG S + LL+
Sbjct: 117 AAFLHYGFTHILFNMWALYVVGAPLEAALGRLRYGALYLLSALGGSV-LAYLLSP----- 170
Query: 141 FDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG 200
+ A S G G LF + LN +V G++V II +
Sbjct: 171 LNSATAGASGAVFGLFGALFVVGRKLN------MDVRGVVVIIVLNLAFTFIIPLVSSQN 224
Query: 201 VSFLGHLGGILAG 213
+S+ GH+GG++ G
Sbjct: 225 ISWQGHIGGLVTG 237
>gi|329938622|ref|ZP_08288018.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329302113|gb|EGG46005.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 303
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 24/155 (15%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
F+P + R + F H +H+ +NM+SL W G LE ++G F A+ +
Sbjct: 129 FSPLEGVAEGQYYRLLTAMFLHGGYAHIIFNMLSLWWLGAPLEKALGRARFLALYLVSGL 188
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLL 180
++ LLA + ++ ++G SG +F A V++ + D V LL
Sbjct: 189 AGSALSYLLAAA------------NQPSLGASGAIFGLFGATAVLVRRLNYDMRPVIALL 236
Query: 181 VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
V +++ G+++ H+GG++AG++
Sbjct: 237 VIN--------LVLTFGWSGIAWEAHIGGLVAGVM 263
>gi|302531387|ref|ZP_07283729.1| predicted protein [Streptomyces sp. AA4]
gi|302440282|gb|EFL12098.1| predicted protein [Streptomyces sp. AA4]
Length = 320
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 36/194 (18%)
Query: 35 VTAALLATNTLIYL-----RPAFLDSLVPSIH---EVWFNPHLILKYKDLKRFFLSPFYH 86
VTA L+A N I+L + D+ I E+W P L + R F S F H
Sbjct: 87 VTATLIAVNVAIFLITVVQAKSLFDNGAARIEMLGELWTYPAL--GGGEWWRIFTSGFLH 144
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
H+ N SL G LE G + F A+ +++ A + VL FD
Sbjct: 145 YGPIHIAANAFSLWMMGRALEQVFGKSRFLALYF--------VSMFGASTAVLLFDAP-- 194
Query: 147 YYSEYAVGFSGVLFAM-----KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
+ + G SG +F + +VL R + L++ A + +P +
Sbjct: 195 --NRPSAGASGAIFGLLGSYAVIVLKLRLNPTALLINLVINA---------YVTFTIPQI 243
Query: 202 SFLGHLGGILAGIL 215
S L H+GG++ G L
Sbjct: 244 SILAHVGGLVTGAL 257
>gi|145219606|ref|YP_001130315.1| ferredoxin [Chlorobium phaeovibrioides DSM 265]
gi|145205770|gb|ABP36813.1| Fe-S cluster domain protein [Chlorobium phaeovibrioides DSM 265]
Length = 277
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 192 IIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRG-----ATGVLSWPL-- 244
+I + F+P V+ LG L IL I+Y K Y DP+ TII G G +P
Sbjct: 1 MISEAFIPAVTSLGSLALILGIIIYFVSKKFYVAEDPMVTIINGILPGVNCGACGYPSCN 60
Query: 245 RFARYLFRRPRIYGRGTVGGSD 266
+FA L R VGG+D
Sbjct: 61 QFAEELVRTKDTTMTCPVGGAD 82
>gi|300088399|ref|YP_003758921.1| rhomboid family protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528132|gb|ADJ26600.1| Rhomboid family protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 191
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 33/201 (16%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYL----RPAFLDSLVPSIHEVWFNPHLILKYKDLKR 78
+ +Y+R W+ P+ L+ N +I+L P ++ L S P ++
Sbjct: 2 YQQYNRPVWQNPLFI-LIGVNVVIFLITLVSPGIVEQLAVSQSAFTSRPWTVIT------ 54
Query: 79 FFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKS 136
S F H++ S H+ +NM++L + G L ++G E A + + +G G
Sbjct: 55 ---SMFVHSTSSYTHILFNMLALYFFGSYLIQTIG--ERAMLAIYFIGGIVG-------- 101
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELI---I 193
LFF + +YS AVG SG +FA+ L + T V +P W +I +
Sbjct: 102 -SLFFIMLQPFYS--AVGASGAIFALGGAL-AILRPMTRVIIFPIPIPMPLWIAVIGGGL 157
Query: 194 IQMFVPGVSFLGHLGGILAGI 214
+ +PG+++ HLGG+L GI
Sbjct: 158 LISLLPGIAWEAHLGGLLTGI 178
>gi|45198366|ref|NP_985395.1| AFL155Cp [Ashbya gossypii ATCC 10895]
gi|74693150|sp|Q755H8.1|RBD2_ASHGO RecName: Full=Rhomboid protein 2
gi|44984253|gb|AAS53219.1| AFL155Cp [Ashbya gossypii ATCC 10895]
gi|374108623|gb|AEY97529.1| FAFL155Cp [Ashbya gossypii FDAG1]
Length = 261
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 17/184 (9%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFY 94
+TA L TL+Y+ L+ + P ++ +P + K + L R L P H S HL
Sbjct: 17 LTAGLSVFLTLVYV----LNWVFPINEKILLDPGALRKLQ-LTRLSLYPLAHLSIFHLLL 71
Query: 95 NMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVG 154
N+MSL E S G+ F + + LL + G+ L L+ Y + Y G
Sbjct: 72 NLMSLFVPLSMFEASHGT-VFTGITLNLLAIVTGVVYCLVGMLL--------YPNVYVGG 122
Query: 155 FSGVLFAMK---VVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
SG F + V + + + L +P Y L+++ + +PG SF+GHL G+
Sbjct: 123 ASGWCFTLCGYFAVQEAGFRPHYELASLKMPTLYIPLVFLVLVTLLMPGSSFVGHLIGLG 182
Query: 212 AGIL 215
G L
Sbjct: 183 LGYL 186
>gi|226494277|ref|NP_001151264.1| membrane protein [Zea mays]
gi|195645390|gb|ACG42163.1| membrane protein [Zea mays]
Length = 414
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 89/221 (40%), Gaps = 48/221 (21%)
Query: 14 MLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY 73
+ P L AF + P P +A LL A S V HE W
Sbjct: 111 LAPELGRFAFQSFKENPLIGPSSATLLEMG-------ALETSKVTKDHEGW--------- 154
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
R + HA H+ NM+SLL GI+LE EF + + L + G+ L
Sbjct: 155 ----RLITCIWLHAGVVHILANMLSLLMIGIRLE-----KEFGFIRIGTLYVISGVGGSL 205
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
SL + S +VG SG LF + + + SE TN + ++AA L++
Sbjct: 206 LSSLFM--------VSNISVGASGALFGL--LGSMLSELITNW--TIYENKFAALLTLVM 253
Query: 194 IQM------FVPGVSFLGHLGGILAG-----ILYLKLKGGY 223
I + +P V HLGG ++G +L ++ + GY
Sbjct: 254 IILINLAVGILPHVDNFAHLGGFMSGFCLGFVLLMRPQFGY 294
>gi|359771058|ref|ZP_09274523.1| rhomboid family protein [Gordonia effusa NBRC 100432]
gi|359311809|dbj|GAB17301.1| rhomboid family protein [Gordonia effusa NBRC 100432]
Length = 221
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 32 KPPVTAALLATNTLIYLRPAF------LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
+P VT L+A N I+ A + +P + + W + L + R + F
Sbjct: 5 RPLVTYTLIALNVAIFGICAIQANSTDIAVYLPPLFDRWALAGVDLAGGEYWRLLTAGFL 64
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYE 144
H S HL NM+SL G+ LE ++G ++ A+ + AL G S ++ +L + +
Sbjct: 65 HLSLIHLGVNMLSLYVLGVSLEPALGPRQYTAVYLTALFGGSAAVS-MLGEPTTMTAGAS 123
Query: 145 RAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
A Y G G L + VL +R V G++ A +++ + +P +S L
Sbjct: 124 GAIY-----GLMGALLIL--VLRAR-MSVAPVVGII--------AINVVLSLTLPNISIL 167
Query: 205 GHLGGIL 211
HLGG++
Sbjct: 168 AHLGGLI 174
>gi|307719843|ref|YP_003875375.1| rhomboid family protein [Spirochaeta thermophila DSM 6192]
gi|306533568|gb|ADN03102.1| rhomboid family protein [Spirochaeta thermophila DSM 6192]
Length = 213
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 23/199 (11%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFY 94
VT L+ TN L++ L ++ + NP +LK + + F HAS +H+ +
Sbjct: 18 VTLYLIGTNLLVFFLTYLNRGL---LYYMALNPLYLLKGGMVWQLVSYMFAHASFNHILF 74
Query: 95 NMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVG 154
NM+ L + G+Q+E MGS EF + G+ G+ LL L Y + +G
Sbjct: 75 NMLGLFFFGLQVEREMGSREF-LLFYFFTGIFAGLVSLLVYWL-------SGAYGVFLLG 126
Query: 155 FSGVLFAMKVVLNSRSEDYTNVHGLL-----VPARY--AAWAELIIIQMF--VPGVSFLG 205
SGV++ VL + + Y L VPA Y + + ++ F V+ L
Sbjct: 127 ASGVVYG---VLLAFATFYPRARIFLFGIFPVPAPYLVIGYTAIELLAQFGAQDNVAHLT 183
Query: 206 HLGGILAGILYLKLKGGYS 224
HL G LYL L+ G S
Sbjct: 184 HLAGFAGAYLYLVLRLGIS 202
>gi|315648497|ref|ZP_07901596.1| Rhomboid family protein [Paenibacillus vortex V453]
gi|315276191|gb|EFU39537.1| Rhomboid family protein [Paenibacillus vortex V453]
Length = 204
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 41/197 (20%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK----------RFFLSP 83
PVT+ LL N ++++ AF NP +LKY L R+ +
Sbjct: 17 PVTSLLLVINLVMFVITAFDGGSR--------NPVTLLKYGALSDLPEFVDQAWRYVTAM 68
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL +N +LL LE MGS +FA ++ LL G + LA Y
Sbjct: 69 FLHNGFDHLLFNSFALLVFVPPLERIMGSWKFA--ILYLLSGVLGNVIGLAY-------Y 119
Query: 144 ERAYYSEYAVGFSGVLFA-----MKVVLNSRSEDYTNVHGLLVPARYAAWAELI--IIQM 196
ER + + VG SG ++ + + L R H + +R + LI I+
Sbjct: 120 ERMEHYTFLVGASGAIYGAYGAYLYIALFQR-------HVIDESSRKTLYTLLILGILFS 172
Query: 197 FVPGVSFLGHLGGILAG 213
F PGVS + H+GG++ G
Sbjct: 173 FTPGVSLVAHVGGLVGG 189
>gi|157273306|gb|ABV27205.1| integral membrane protein Rhomboid family protein [Candidatus
Chloracidobacterium thermophilum]
Length = 386
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 80/191 (41%), Gaps = 21/191 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVW--FNPHLILKYKDLKRFFLSPFYHAS 88
+ P++ L+ N +++L AF S P + + N LI + +L R + F H
Sbjct: 31 RAPLSYVLIGINVVMFLLTAFAGGSTDPEVLTAFGACNRKLIAQ-GELWRLVVPMFLHIG 89
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
HL NM +L G QLE+ GS F + V GI +A Y A+
Sbjct: 90 VIHLVANMYALWVVGPQLESLYGSARFTILYVL-----SGIGGFVA-------SYFFAHP 137
Query: 149 SEYAVGFSGVLFAM-----KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG LF M V RSE V + + A +II +P +S
Sbjct: 138 ESIGAGASGALFGMFGALLVFVYKYRSEIPPLVRATMRRGVWLTLALNLIITFSIPFISR 197
Query: 204 LGHLGGILAGI 214
GH+GG+L GI
Sbjct: 198 SGHVGGLLTGI 208
>gi|357126318|ref|XP_003564835.1| PREDICTED: rhomboid protein 2-like [Brachypodium distachyon]
Length = 273
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLET----SMGSNEFAAMVVALLGMSQGITLLL 133
R S F H S HL +NM S LW +E +G + + L+ +S + L +
Sbjct: 54 RIITSAFSHISVVHLVFNM-SALWSLGAVEQLGQLGLGVEYYLHYTLVLVVLSGLLVLGI 112
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAEL 191
++ F E + AVG+S V+F +L ++ N+ G+L +P +A + L
Sbjct: 113 YHVMIQKFKVEY-FRRVTAVGYSCVVFGWMTILAAKQPSSKLNLFGVLSLPISFAPFESL 171
Query: 192 IIIQMFVPGVSFLGHLGGILAG 213
I + VP SF+GHL GI+ G
Sbjct: 172 IFTSIMVPQASFIGHLSGIIVG 193
>gi|380300997|ref|ZP_09850690.1| membrane protein [Brachybacterium squillarum M-6-3]
Length = 310
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 25/187 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
+P VT ++ ++ A +V + + F P L Y F + F H H
Sbjct: 88 RPLVTYTVIGLCVALFAGQAISGGIVEQL--LIFAPFRALAYP--WTFLTAGFLHGGVMH 143
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA--KSLVLFFD-YERAYY 148
L NM +L G LE ++G FAA+ +T +LA +++LF D +A+Y
Sbjct: 144 LLLNMYALWIIGQYLEKTLGHVRFAAIY---------LTSILAGHTAVMLFTDATSQAWY 194
Query: 149 SEYAVGFSGV--LFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGH 206
S G+ LFA ++N R T +L+ ++I P +S+ GH
Sbjct: 195 SGTLGASGGIFGLFAALFIVNRRLGGQTAQVAVLIGLN-------LVITFLFPNISWQGH 247
Query: 207 LGGILAG 213
LGG++ G
Sbjct: 248 LGGLVMG 254
>gi|300742642|ref|ZP_07072663.1| rhomboid family protein [Rothia dentocariosa M567]
gi|300381827|gb|EFJ78389.1| rhomboid family protein [Rothia dentocariosa M567]
Length = 261
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 31/190 (16%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYK------DLKRFFLSPFYH 86
P VT L+ N ++YL L ++P + W LK+ + R S F H
Sbjct: 73 PYVTYTLIGINVVVYL----LQLIIP---QYWVYSMFALKWDYTEFTGEYYRVLTSGFLH 125
Query: 87 ASE--SHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
+ SH+ NM+SL GI LE MG + + +++++G S G+ LL +
Sbjct: 126 SQNDYSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLLSIVGGSFGVLLLDDPTA------ 179
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
E S G G + V+L R N+ L++ A + VPG+S+
Sbjct: 180 EVVGASGGIFGLIGAYLVIMVILRERD----NIRALMI-----MIAVNVAFGFLVPGISW 230
Query: 204 LGHLGGILAG 213
H GG + G
Sbjct: 231 QAHAGGFVVG 240
>gi|227506161|ref|ZP_03936210.1| rhomboid family protein [Corynebacterium striatum ATCC 6940]
gi|227197268|gb|EEI77316.1| rhomboid family protein [Corynebacterium striatum ATCC 6940]
Length = 214
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 25/136 (18%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL NM L++ G ++E ++G +AA S +++L A + VL+ DY
Sbjct: 64 FMHIDVGHLTLNMCLLVFIGREIEQALGHALYAA--------SYVVSVLGASAAVLWMDY 115
Query: 144 ERAYYSEYAVGFSGVLFAMKVVL----NSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
+ VG SG L+A+ +L SR D LV A ++ +
Sbjct: 116 DAP-----TVGASGALYALLAMLVGVYRSRGMD-LRAPIFLVLAN-------VVYTFIMS 162
Query: 200 GVSFLGHLGGILAGIL 215
GVS GHLGG+L GI+
Sbjct: 163 GVSLWGHLGGLLIGIV 178
>gi|383456807|ref|YP_005370796.1| rhomboid family protein [Corallococcus coralloides DSM 2259]
gi|380730049|gb|AFE06051.1| rhomboid family protein [Corallococcus coralloides DSM 2259]
Length = 252
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL +NM+++ G LE +GS F LG+S +T L + LFF++
Sbjct: 102 FEHGGAMHLLFNMLAVYSLGASLERGIGSLRF-------LGLSL-VTALGGSAFALFFNF 153
Query: 144 ERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
+ VG SG++ AM +L + + W + + +P
Sbjct: 154 D-----TVTVGASGMILGWGGAMLPILTQQGRR-----------EHMFWLVQVAVISLLP 197
Query: 200 GVSFLGHLGGILAGI 214
GVS+ GHLGG + G+
Sbjct: 198 GVSWAGHLGGFVFGL 212
>gi|376283529|ref|YP_005156739.1| hypothetical protein CD31A_0026 [Corynebacterium diphtheriae 31A]
gi|371577044|gb|AEX40712.1| putative membrane protein [Corynebacterium diphtheriae 31A]
Length = 205
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLK---- 77
N R + P TA L A LIYL S+ ++ + W H L Y
Sbjct: 7 MNALKRAYGQAPATAVLCALTILIYLLTVVESRSIEHNLSDSWIADHWTL-YGPYSHGLG 65
Query: 78 --RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLA 134
R + F H+ +HL NM L + G ++E +GS F A +V+ +G S T+LL
Sbjct: 66 WLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGRFTLAYIVSGIGASA--TVLLM 123
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
L VG SG ++ + + S S R A LI+I
Sbjct: 124 DPL------------APTVGASGAVYGLMAIFVSMSYRL----------RRDLTAPLILI 161
Query: 195 ------QMFVPGVSFLGHLGGILAG 213
+ + GVS GHLGG+L G
Sbjct: 162 AVNVGYSLLMDGVSLWGHLGGLLTG 186
>gi|295396584|ref|ZP_06806741.1| S54 family peptidase [Brevibacterium mcbrellneri ATCC 49030]
gi|294970599|gb|EFG46517.1| S54 family peptidase [Brevibacterium mcbrellneri ATCC 49030]
Length = 228
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIH---EVWFNPHLILKYKDLKRFFLSPFYHA- 87
K PVT + A L++L VP H + F P + + RF + H+
Sbjct: 43 KSPVTVTIAAVTVLVWL-----TQFVPGWHVQERLAFVP--LWALDEPWRFATTMLVHSQ 95
Query: 88 -SESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYER 145
S +H+ +NMM LL G LE ++GS FA V++ +G S + LL + + F
Sbjct: 96 PSPTHVLFNMMGLLIFGTFLERALGSVFFAVTYVLSGVGGSAMVWLLATQGIAHPF---- 151
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV-PGVSFL 204
A Y VG SG +F + VL S+ G +V + L ++ +FV P +++
Sbjct: 152 ALY----VGASGAVFGLVGVLLVPSKRLDRNWGGVV-----GFVLLNVLMLFVEPNIAWE 202
Query: 205 GHLGGILAGIL 215
HLGG++ G +
Sbjct: 203 AHLGGLIVGFI 213
>gi|320100850|ref|YP_004176442.1| rhomboid family protein [Desulfurococcus mucosus DSM 2162]
gi|319753202|gb|ADV64960.1| Rhomboid family protein [Desulfurococcus mucosus DSM 2162]
Length = 447
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 29 LPWK-------PPVTAALLATNTLIYL----RPAFLDSLVPSIHEVWFNPHLILK--YKD 75
+PW+ T ++A N ++YL R FL+S SI+ + F P L+ +
Sbjct: 4 VPWERSRGMGSSKATTLIVAANIVVYLYTSYRNMFLESTNESIYALGFIPALLFTDPLQG 63
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEF 115
+ R F + F HA H+F+NM L G ++E+ +GS +
Sbjct: 64 VVRIFTAMFTHADFFHIFFNMYFLWLFGRRIESVIGSRRY 103
>gi|312137531|ref|YP_004004867.1| serine peptidase [Rhodococcus equi 103S]
gi|311886870|emb|CBH46178.1| putative serine peptidase [Rhodococcus equi 103S]
Length = 321
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
+ +L R S F H HL NM +L G E +G + + A+ + I+
Sbjct: 139 VAQGELFRVIGSGFLHFGLIHLAVNMFALWVLGRDTEIVLGRSRYLAVYL--------IS 190
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAE 190
LL + L F+ A+ + + G++ A V+L T V ++
Sbjct: 191 LLGGSASALMFESPFAFTAGASGAIFGIMGAQAVLLLRMRRSATPVLTVI--------GI 242
Query: 191 LIIIQMFVPGVSFLGHLGGILAG 213
++I + VPG+S GHLGG++AG
Sbjct: 243 NVVISLTVPGISLWGHLGGLVAG 265
>gi|443670730|ref|ZP_21135859.1| Rhomboid family protein [Rhodococcus sp. AW25M09]
gi|443416665|emb|CCQ14196.1| Rhomboid family protein [Rhodococcus sp. AW25M09]
Length = 251
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPS-----IHEVWFNPHLILKYKDLKRFFLSPFYH 86
K P+T AL+A N +I+ A + S + W +++ DL R S F H
Sbjct: 24 KTPLTFALIAVNVVIFGITAAQSGSITSNFNSPLAREWSLNSVLVANGDLFRLIGSGFVH 83
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYER 145
HL NM +L G +E +G + + A+ ++LLG S + +L +
Sbjct: 84 IGPIHLLVNMFALYLIGRDVELILGRSRYLAVYFLSLLGGSASVMVL---------ENPL 134
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
A + + G+L A V+L V L++ A I I + +P +S G
Sbjct: 135 AATAGASGAVFGLLGAQAVILLRLKRSPAPV--LIIIALN------IFISVSIPSISLWG 186
Query: 206 HLGGILAG 213
H+GG++AG
Sbjct: 187 HMGGLVAG 194
>gi|432922836|ref|XP_004080383.1| PREDICTED: calpain-15-like [Oryzias latipes]
Length = 1140
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSRSGNDL 303
W+CP+C+ NSG S CE+C +SR+G+DL
Sbjct: 318 TWKCPSCSLPNSGSSSKCEVCRSSRAGSDL 347
>gi|307197682|gb|EFN78849.1| Calpain-D [Harpegnathos saltator]
Length = 1381
Score = 43.9 bits (102), Expect = 0.10, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQ-LSRHSNIPLEELRHRR 323
S TR ++ W+C CT++N +ICEMC +S+S + +S D+ +SR LR +R
Sbjct: 706 SRTRDSSHAQWQCKLCTYENKSTNAICEMCQSSKSLSQVSGDRGISRLIESGTSTLRIQR 765
Query: 324 IE 325
E
Sbjct: 766 QE 767
>gi|262200065|ref|YP_003271273.1| rhomboid family protein [Gordonia bronchialis DSM 43247]
gi|262083412|gb|ACY19380.1| Rhomboid family protein [Gordonia bronchialis DSM 43247]
Length = 303
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + F H S H+ NM+SL G LE ++G+ + A+ + I+LL +
Sbjct: 126 RLLTAGFLHFSVMHVAVNMISLYIIGRDLERALGTYRYLAVYL--------ISLLGGSAA 177
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
V+ F+ + + + G++ AM V++ + AR A L+II
Sbjct: 178 VMLFEADNVQTAGASGAIYGLIGAMLVIV--------------LKARVPATPVLVIIGFN 223
Query: 198 V------PGVSFLGHLGGILAGI 214
V PG+S + HLGG+ G+
Sbjct: 224 VVLSVSLPGISLMAHLGGLAFGV 246
>gi|119720561|ref|YP_921056.1| rhomboid family protein [Thermofilum pendens Hrk 5]
gi|119525681|gb|ABL79053.1| Rhomboid family protein [Thermofilum pendens Hrk 5]
Length = 444
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 83/216 (38%), Gaps = 52/216 (24%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFN-----PHLILKYKDLKRFFLSPFYHAS 88
PVT ++ N +YL ++ + + ++ + W N P + + L R F S F HA+
Sbjct: 18 PVTLGIILVNVAVYLVSSYENGFL-AVSDAWVNAFAFVPAYFARPEHLYRLFTSMFLHAN 76
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEF------------------------AAMVVALLG 124
+H+F+NM+ L G +E +GS + ++ V LG
Sbjct: 77 LAHIFFNMLYLYTFGKSVEAVLGSERYFLLYFASGILASVFHTAFLPIEGASSAFVPALG 136
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR 184
S I+ +L L+LF Y F + F MK A
Sbjct: 137 ASGAISGVLGAYLLLFPGTRLTMCFFYV--FIPLCFTMKA-----------------AAY 177
Query: 185 YAAWAELIIIQMFVP---GVSFLGHLGGILAGILYL 217
W L I+Q F+ GV+ H GG + G+ L
Sbjct: 178 LVFWFALQILQGFLGASLGVAVFAHAGGFIGGLALL 213
>gi|6325010|ref|NP_015078.1| Rbd2p [Saccharomyces cerevisiae S288c]
gi|74583829|sp|Q12270.1|RBD2_YEAST RecName: Full=Rhomboid protein 2
gi|1061243|emb|CAA91598.1| putative protein [Saccharomyces cerevisiae]
gi|1370507|emb|CAA97967.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285815299|tpg|DAA11191.1| TPA: Rbd2p [Saccharomyces cerevisiae S288c]
gi|392296043|gb|EIW07146.1| Rbd2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 262
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 38 ALLATNTLIYLRPAFLDSLVPSIHE-VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNM 96
A L T +++L +L S + ++ E + P + K + + R L P H S HL +N+
Sbjct: 15 AALTTGLVVFLTAIYLLSFIFALREDLSLAPESLFKLQ-MSRLSLYPLIHLSLPHLLFNV 73
Query: 97 MSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFS 156
+++ W + L + + + L + GI L L+ Y A + A G+
Sbjct: 74 LAI-WAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLL----YPEALVAG-ASGWC 127
Query: 157 GVLFAMKVVLNSRSEDYTNVH--GLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAG 213
LFA S+ T + +P Y L+ I + +PG SF GH G+ G
Sbjct: 128 FTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHFFGLCVG 186
>gi|348671805|gb|EGZ11625.1| hypothetical protein PHYSODRAFT_317136 [Phytophthora sojae]
Length = 4325
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 254 PRIYGRGTVGGSDTRRTAP----IIWRCPACT---FDNSGWLSICEMCGTSRSGNDLSSD 306
P +Y GT GGSD P + W CPACT F+ + C++CGT R
Sbjct: 1473 PVVYEPGTGGGSDNPDENPQELKMYWECPACTCANFNGDNPNATCDVCGTPRIARAPPQQ 1532
Query: 307 QLSR 310
Q +R
Sbjct: 1533 QQAR 1536
>gi|384109368|ref|ZP_10010246.1| putative membrane protein [Treponema sp. JC4]
gi|383869050|gb|EID84671.1| putative membrane protein [Treponema sp. JC4]
Length = 217
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 66 NPHLILKYKDLKRFFLSPFYH--ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALL 123
NP + KY +F F H +S H+ +NM+ LL G+QLE ++GS EF L
Sbjct: 49 NPVAVYKYHMYWQFVTYMFVHDYSSIRHILFNMLGLLVFGLQLEKAIGSKEF-----VLF 103
Query: 124 GMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAM---KVVLNSRSEDYTNVHGLL 180
+ GI + V +F + YS +G SG ++A+ V RS + + GL+
Sbjct: 104 YLLCGILSCVFSFAVYYFTGQ---YSVRLLGASGAVYAVLFAYAVFFPRSVIF--IWGLI 158
Query: 181 ---VPARYAAWAELIIIQMFVP--GVSFLGHLGGILAGILYLKLKGG 222
P +A + F P GV+ + HL G A LY ++ G
Sbjct: 159 PVPAPVLVLIYAAIEFFSQFNPASGVAHMTHLFGFFAAWLYFVIRMG 205
>gi|47216738|emb|CAG01012.1| unnamed protein product [Tetraodon nigroviridis]
Length = 381
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 271 APIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSS--DQLSRHSNIPLEELRH 321
+P W C ACT+ NS L CEMC + RS + S Q IPL + RH
Sbjct: 237 SPEAWSCGACTYSNSSLLPYCEMCESPRSASAPKSVLCQPVHRPGIPLHQGRH 289
>gi|294656613|ref|XP_458911.2| DEHA2D10252p [Debaryomyces hansenii CBS767]
gi|218511831|sp|Q6BSA9.2|RBD2_DEBHA RecName: Full=Rhomboid protein 2
gi|199431606|emb|CAG87065.2| DEHA2D10252p [Debaryomyces hansenii CBS767]
Length = 286
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 17/149 (11%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
DL R +H +H N++ L E + G+ F + + +L ++ G+ +
Sbjct: 61 DLNRLSFYLLFHRGFTHWLLNVVGLFSPLAIFERTNGT-VFTGVTLNVLAVTAGLQFCIV 119
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNV--------HGLLVPARYA 186
L+ Y + +G SGV+F+ + + T V + +P Y+
Sbjct: 120 GKLL--------YPNTQVIGLSGVVFSFMSFMAYKEHHTTPVIYTFKYQGSEVSIPTLYS 171
Query: 187 AWAELIIIQMFVPGVSFLGHLGGILAGIL 215
+ LI+ + +PG SF GHL GI +G L
Sbjct: 172 PFIFLIVCMVLIPGSSFWGHLAGISSGYL 200
>gi|167760294|ref|ZP_02432421.1| hypothetical protein CLOSCI_02667 [Clostridium scindens ATCC 35704]
gi|336421421|ref|ZP_08601579.1| hypothetical protein HMPREF0993_00956 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167662177|gb|EDS06307.1| peptidase, S54 family [Clostridium scindens ATCC 35704]
gi|336000700|gb|EGN30847.1| hypothetical protein HMPREF0993_00956 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 204
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 32 KPPVTAALLATNTLIYLRPAFL----DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
K P T LLA N ++ +F D L H + P I + + R F S F H
Sbjct: 7 KAPCTILLLAANVAVFFLLSFQGATEDGLFMLEHGAMYVP-FITEQGEYYRMFTSMFLHF 65
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
HLF NM++L+ G LE +GS F + +
Sbjct: 66 GFEHLFNNMITLVLIGWNLEVEIGSIRFLVIYI 98
>gi|409356388|ref|ZP_11234775.1| putative membrane-bound rhomboid protease [Dietzia alimentaria 72]
Length = 244
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 25/180 (13%)
Query: 34 PVTAALLATNTLIYLRP-----AFLDSLVPSIHE-VWFNPHLILKYKDLKRFFLSPFYHA 87
PVTA L+A N +Y+ +FLD+ ++ E P L+ + R S F H
Sbjct: 19 PVTAWLIAANLAVYVATVVQARSFLDNRASALFEFTALYPPLVAFRDEWWRLLTSAFQHF 78
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERA 146
HL NM L GI +E S+G + AM +V+ LG S V+FF + A
Sbjct: 79 GPMHLLLNMYMLWLLGIGIERSVGHARYLAMYLVSALGGSVA---------VMFFS-QNA 128
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGH 206
+ + G++ A +V + D + LLV + + VPG+S H
Sbjct: 129 LTAGASGAIFGLMGAYAIVAMTMRVDVRGIGILLVLN--------VGVSFIVPGISLAAH 180
>gi|383809416|ref|ZP_09964936.1| peptidase, S54 family [Rothia aeria F0474]
gi|383447768|gb|EID50745.1| peptidase, S54 family [Rothia aeria F0474]
Length = 257
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSI---HEVWFNPHLILKYKDLKRFFLSPFYHAS 88
P +T L+ N ++YL L ++P+ +E + + + R S F H+
Sbjct: 72 NPNITYTLIGINVVVYL----LQWIIPNYWVYNEFAYKADWVAYSHEYYRAITSGFLHSQ 127
Query: 89 E--SHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYER 145
SHL NM+SL G +E +G+ + + + A+LG S + +L ++V+
Sbjct: 128 NDPSHLLLNMVSLYLFGAAIEKMIGNWRYLLVYLTAILGGSAAVWVLEPHAVVVGA---- 183
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
S G G + V L R NV ++V +I +PG+S+
Sbjct: 184 ---SGGIFGLMGAYLTIMVALKERD----NVRSVMV-----LIGVNVIYGFIMPGISWQA 231
Query: 206 HLGGILAGIL 215
HLGG +AG +
Sbjct: 232 HLGGFIAGAI 241
>gi|410895715|ref|XP_003961345.1| PREDICTED: calpain-15-like [Takifugu rubripes]
Length = 1147
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRSGNDL 303
W+CP C+ N G LS CE C +SR+G DL
Sbjct: 328 WKCPGCSVPNPGSLSKCEACRSSRAGADL 356
>gi|336121537|ref|YP_004576312.1| Rhomboid family protein [Methanothermococcus okinawensis IH1]
gi|334856058|gb|AEH06534.1| Rhomboid family protein [Methanothermococcus okinawensis IH1]
Length = 191
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYN 95
T ++ +++L F +SLV + + FNP L +F S F H S +HLF N
Sbjct: 4 TITIIGVCVVVFLFELFSNSLV---NLLSFNPQYALNMP--WQFITSIFIHGSFTHLFLN 58
Query: 96 MMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGF 155
M L + G++LE +G F + + G++ I LL + Y Y AVG
Sbjct: 59 MFVLFFFGLRLEKWIGGANFLK-IFFISGIAGNIAYLL-------YSYSTNQYIP-AVGA 109
Query: 156 SGVLFAMKVVLNSRSEDYTNVHGLLVP-----------ARYAAWAELIIIQMFVPGVSFL 204
SG A+ ++ + + N+ ++ P +A + L +I +P +
Sbjct: 110 SG---AISGIIGALTILDPNMEIMIFPFPIPIKLKYATILFAGFEILCLIFSIMPTIGHA 166
Query: 205 GHLGGILAGILYLKL 219
HLGG+ G+L KL
Sbjct: 167 AHLGGLFTGMLCGKL 181
>gi|418459787|ref|ZP_13030898.1| membrane protein [Saccharomonospora azurea SZMC 14600]
gi|359740100|gb|EHK88949.1| membrane protein [Saccharomonospora azurea SZMC 14600]
Length = 267
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 79/196 (40%), Gaps = 26/196 (13%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHE--------VWFNPHLILKYKDLKRF 79
R+P + V L+A N ++Y AF S + H +W P ++ + R
Sbjct: 37 RVPQRLVVVPLLIAINVVVYALTAFQASDAMNNHNSPVFADGVLW--PEAVVVLDEWWRL 94
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
S F H HL NM++L G LE +G F A+ L M A
Sbjct: 95 LTSGFLHYGLIHLAMNMLALWVLGRDLEMLLGRVRFVALY--FLSMF---AGGAAVFAFG 149
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
D A S G G + VL R T + G++V +I+ + +P
Sbjct: 150 AADTGTAGASGAIYGLMGAILV--AVLRLRLNPTTAI-GIIVLN--------VILSVSIP 198
Query: 200 GVSFLGHLGGILAGIL 215
+S LGHLGG++AG L
Sbjct: 199 NISLLGHLGGLVAGAL 214
>gi|336319156|ref|YP_004599124.1| Rhomboid family protein [[Cellvibrio] gilvus ATCC 13127]
gi|336102737|gb|AEI10556.1| Rhomboid family protein [[Cellvibrio] gilvus ATCC 13127]
Length = 299
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES- 90
+P VT A +A + YL +D ++P + + + RF S F H+ S
Sbjct: 67 RPVVTLAFIALCVVAYLGQWTVDGFTTDWK---YSP--LRGHAEPWRFLTSAFLHSPGSI 121
Query: 91 -HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
H+ NM++L G LE +G +A + LL G ++L + + + D+ YS
Sbjct: 122 FHIVLNMVALWTVGPYLEVQLGRVRYATLY--LLSAIGGSVVVLLVAALGWSDW----YS 175
Query: 150 EYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
VG SG +F A VV+ + G++ ++ VPG+S+ G
Sbjct: 176 G-VVGASGAVFGLFGAAFVVMWRSGHPAQGMLGVI--------GVNMVFSFVVPGISWQG 226
Query: 206 HLGGILAG 213
HLGG++ G
Sbjct: 227 HLGGLVTG 234
>gi|21675030|ref|NP_663095.1| hypothetical protein CT2221 [Chlorobium tepidum TLS]
gi|21648265|gb|AAM73437.1| membrane protein, putative [Chlorobium tepidum TLS]
Length = 275
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 43/211 (20%)
Query: 33 PPVTAALLATNTLIYL--RPAFLDSLVPSIHEVW----FNP-----HLILKYKDLKRFFL 81
PP A++ TN +++L AF +L + +W NP HL ++ + FL
Sbjct: 17 PPAIKAIIITNVIVFLFQNSAFGPALT-TFGALWPIGSHNPAGYSFHL---WQPITYLFL 72
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
H S +H+F+NM +L G+++E G+ F + + G+ + LLA
Sbjct: 73 ----HGSFAHIFFNMFALWMFGVEIENYWGTRNFVSFYF-ICGIGAALINLLA------- 120
Query: 142 DYERAYYSEY-AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG 200
Y S Y +G SG +F + + D L+P + + + F+ G
Sbjct: 121 ----TYGSPYPTIGASGAIFGVLLAFGMMFPDRYIYLYFLLPIKTKYFVAGYALIEFIMG 176
Query: 201 -----------VSFLGHLGGILAGILYLKLK 220
+++ HLGG+L G +Y+ ++
Sbjct: 177 LGNRTMGSGSDIAYFAHLGGMLFGYIYIVIR 207
>gi|397678270|ref|YP_006519805.1| Rhomboid protease gluP [Mycobacterium massiliense str. GO 06]
gi|395456535|gb|AFN62198.1| Rhomboid protease gluP [Mycobacterium massiliense str. GO 06]
Length = 287
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 69 ITWALIAVNVLVY-TATVSDGVDGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 127
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 128 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 177
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 178 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 224
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 225 AGHMGGLLFGVL 236
>gi|374316397|ref|YP_005062825.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359352041|gb|AEV29815.1| putative membrane protein [Sphaerochaeta pleomorpha str. Grapes]
Length = 213
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 24 NEYHRLPWK-PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLS 82
N Y + K + A + T I R A+ +++PS + + + +FF
Sbjct: 15 NTYTNITLKLIIINAVVFLLTTYIAPRSAYYLAMIPSF----------VLHGYIWQFFTY 64
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFD 142
F H SH+F+NM+SL G +E +GS EF + L G+ GI + F
Sbjct: 65 MFVHGGFSHIFFNMLSLFIFGTMVEQRVGSKEF-LLFYLLTGIVSGI--------ISFLC 115
Query: 143 YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGL-LVPARYAAWAELIII-----QM 196
Y A + VG SG ++ + +++ + Y V L+P R L Q+
Sbjct: 116 YLAAGTNVILVGASGAIYGV-LLMFAVFYPYARVFVFGLIPIRAPVLVVLYAFIELSSQV 174
Query: 197 FVPG--VSFLGHLGGILAGILYLKLK 220
F G V+ L HL G+L LY +++
Sbjct: 175 FGAGGNVAHLTHLSGLLFAYLYCRIR 200
>gi|453362588|dbj|GAC81512.1| hypothetical protein GM1_036_00120 [Gordonia malaquae NBRC 108250]
Length = 234
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 22/187 (11%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK----RFFLSPFYHA 87
KP VT L+A N +++ + + +++ R S F H
Sbjct: 14 KPIVTYTLIAINVVVFAAVLLQAGGTTLFYSSIYREGVLISGAGFDDQYWRLLTSGFLHQ 73
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERA 146
S HL NM SL G LE ++G + A+ +V+LLG S + V+ F
Sbjct: 74 SVPHLAINMFSLYIIGADLERALGRGRYLAIYLVSLLGGS---------AAVMAFQSGVT 124
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGH 206
+ + G++ A+ ++L V G++ A I+I + +PG+S GH
Sbjct: 125 ATAGASGAIYGLMGALLILLLRVKAPVQTVLGVI--------AINIVISVTIPGISLFGH 176
Query: 207 LGGILAG 213
LGG++ G
Sbjct: 177 LGGLVFG 183
>gi|367004200|ref|XP_003686833.1| hypothetical protein TPHA_0H01940 [Tetrapisispora phaffii CBS 4417]
gi|357525135|emb|CCE64399.1| hypothetical protein TPHA_0H01940 [Tetrapisispora phaffii CBS 4417]
Length = 269
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
DL R L P H S HL +N +L E + G+ + +++ +L + G
Sbjct: 52 DLTRLLLYPLAHLSIPHLLFNCFALFTPLNAFEATHGT-VYTFIMLNILSVVTG------ 104
Query: 135 KSLVLFFDYERAYYSEYAV----GFSGVLFAMKVVLNSRSEDYTNVH--GLLVPARYAAW 188
V++ Y A+ G+ LFA V S + T + + +P
Sbjct: 105 ---VIYCVVGHWLYPTVAIAGASGWCFTLFAYFSVRESTVKPTTTLFFANITIPTILDPV 161
Query: 189 AELIIIQMFVPGVSFLGHLGGILAGIL 215
L++I + +PG SF GHL G+L G L
Sbjct: 162 VTLVVIALLIPGSSFWGHLFGLLVGYL 188
>gi|376247391|ref|YP_005139335.1| hypothetical protein CDHC04_0024 [Corynebacterium diphtheriae HC04]
gi|372113959|gb|AEX80017.1| putative membrane protein [Corynebacterium diphtheriae HC04]
Length = 205
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLK---- 77
N R + P TA L A LIYL S+ ++ + W H L Y
Sbjct: 7 MNALKRAYGQTPATAVLCALTILIYLLTVVESRSIEHNLSDSWIADHWTL-YGPYSHGLG 65
Query: 78 --RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLA 134
R + F H+ +HL NM L + G ++E +GS F A +V+ +G S T+LL
Sbjct: 66 WLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGRFTLAYIVSGIGASA--TVLLM 123
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
L VG SG ++ + + + S R A LI+I
Sbjct: 124 DPL------------APTVGASGAVYGLMAIFVAMSYRL----------RRDLTAPLILI 161
Query: 195 ------QMFVPGVSFLGHLGGILAG 213
+ + GVS GHLGG+L G
Sbjct: 162 AVNVGYSLLMDGVSLWGHLGGLLTG 186
>gi|376250196|ref|YP_005137077.1| hypothetical protein CDHC03_0028 [Corynebacterium diphtheriae HC03]
gi|372111700|gb|AEX77759.1| putative membrane protein [Corynebacterium diphtheriae HC03]
Length = 205
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLK---- 77
N R + P TA L A LIYL S+ ++ + W H L Y
Sbjct: 7 MNALKRAYGQAPATAVLCALTILIYLLTVVESRSIEHNLSDSWIADHWTL-YGPYSHGLG 65
Query: 78 --RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLA 134
R + F H+ +HL NM L + G ++E +GS F A +V+ +G S T+LL
Sbjct: 66 WLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGRFTLAYIVSGIGASA--TVLLM 123
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
L VG SG ++ + + + S R A LI+I
Sbjct: 124 DPL------------APTVGASGAVYGLMAIFVAMSYRL----------RRDLTAPLILI 161
Query: 195 ------QMFVPGVSFLGHLGGILAG 213
+ + GVS GHLGG+L G
Sbjct: 162 AVNVGYSLLMDGVSLWGHLGGLLTG 186
>gi|169627133|ref|YP_001700782.1| rhomboid family protein [Mycobacterium abscessus ATCC 19977]
gi|169239100|emb|CAM60128.1| Rhomboid family protein [Mycobacterium abscessus]
Length = 287
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 69 ITWALIAVNVLVY-TATVSDGVGGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 127
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 128 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 177
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 178 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 224
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 225 AGHMGGLLFGVL 236
>gi|302559651|ref|ZP_07311993.1| rhomboid family protein [Streptomyces griseoflavus Tu4000]
gi|302477269|gb|EFL40362.1| rhomboid family protein [Streptomyces griseoflavus Tu4000]
Length = 295
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 32/192 (16%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEV--W----FNPHLILKYKDLKRFFLSPFYHAS 88
VT LL N ++L SLV ++ + W F P + + R F S F H
Sbjct: 85 VTKILLGINLAVFLAVQVRPSLVRDLYLIGTWPPAPFLPTQGVAEGEWYRLFTSMFTHQE 144
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG-ITLLLAKSLVLFFDYERAY 147
H+ +NM+SL W G LE ++G + + + + G++ G +T LLA
Sbjct: 145 IWHIAFNMLSLWWLGGPLEQALGRVRYLTLYL-ISGLAGGALTYLLASG----------- 192
Query: 148 YSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
+ ++G SG +F A V++ + D V LLV +I +++
Sbjct: 193 -TTASLGASGAIFGLFGATAVLMRRLNYDMRPVIALLVIN--------LIFTFGWSNIAW 243
Query: 204 LGHLGGILAGIL 215
H+GG++AG++
Sbjct: 244 QAHIGGLVAGVV 255
>gi|326529769|dbj|BAK04831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + F H S HL +NM S LW +E +G + L + L L
Sbjct: 54 RLITAAFSHVSVVHLVFNM-SALWSLGAVE-QLGPQAGLGVQYYLHYTLVLVVLSGLLVL 111
Query: 138 VLFFDYERAYYSEY-----AVGFSGVLFA-MKVVLNSRSEDYTNVHGLL-VPARYAAWAE 190
++ R + +Y AVG+S V+F M ++ + N+ G+L +P +A +
Sbjct: 112 GIYHVMIRRFKVDYFRRVTAVGYSCVVFGWMTILAAKQPSSKLNLFGVLSLPISFAPFES 171
Query: 191 LIIIQMFVPGVSFLGHLGGILAG 213
LI + VP SF+GHL GI+ G
Sbjct: 172 LIFTSIMVPQASFVGHLSGIIVG 194
>gi|50547587|ref|XP_501263.1| YALI0B23364p [Yarrowia lipolytica]
gi|49647129|emb|CAG83516.1| YALI0B23364p [Yarrowia lipolytica CLIB122]
Length = 356
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
S F H H F NM L GI + +MGS F M + + +S T LL SL+
Sbjct: 199 SAFSHQEFWHFFVNMFVLYQFGIPVAMTMGSAWFCHMYMTSVVVSS-FTSLLVPSLL--- 254
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELI-IIQMFVPG 200
RA S +G SG +F++ V S D T + VP + AW + I M V G
Sbjct: 255 --GRAIMS---LGASGAIFSVVGVFCSVFPDAT-IGFFFVPLPFGAWWFFLGSIAMNVGG 308
Query: 201 V-------SFLGHLGGILAGILY 216
+ + GHLGG L+G+ +
Sbjct: 309 IVGRWGRYDYAGHLGGSLSGLYF 331
>gi|300780117|ref|ZP_07089973.1| rhomboid family protein [Corynebacterium genitalium ATCC 33030]
gi|300534227|gb|EFK55286.1| rhomboid family protein [Corynebacterium genitalium ATCC 33030]
Length = 215
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 63 VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVAL 122
V + P ++ R S F H SHL N+ L++ G +E +G+ + A +A
Sbjct: 46 VLYGPLVVDTPFGYLRALTSGFLHVDISHLVVNLFVLVFIGPVVERFVGTGPYVAAYLA- 104
Query: 123 LGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLLV 181
+L + VLFF + ++ G SG L+ M +++ + + ++ LV
Sbjct: 105 -------CILGGSAAVLFFGF-----AQPTAGASGALYGLMAILVAIAARNRADLRAPLV 152
Query: 182 PARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
A ++ + +PGVS GHLGG++ G L
Sbjct: 153 LV-----AGNLVFTLVMPGVSLWGHLGGMVTGAL 181
>gi|375289754|ref|YP_005124294.1| hypothetical protein CD241_0025 [Corynebacterium diphtheriae 241]
gi|371579425|gb|AEX43092.1| putative membrane protein [Corynebacterium diphtheriae 241]
Length = 204
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLK---- 77
N R + P TA L A LIYL S+ ++ + W H L Y
Sbjct: 6 MNALKRAYGQAPATAVLCALTILIYLLTVVESRSIEHNLSDSWIADHWTL-YGPYSHGLG 64
Query: 78 --RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLA 134
R + F H+ +HL NM L + G ++E +GS F A +V+ +G S T+LL
Sbjct: 65 WLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGRFTLAYIVSGIGASA--TVLLM 122
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
L VG SG ++ + + + S R A LI+I
Sbjct: 123 DPL------------APTVGASGAVYGLMAIFVAMSYRL----------RRDLTAPLILI 160
Query: 195 ------QMFVPGVSFLGHLGGILAG 213
+ + GVS GHLGG+L G
Sbjct: 161 AVNVGYSLLMDGVSLWGHLGGLLTG 185
>gi|38232669|ref|NP_938436.1| hypothetical protein DIP0027 [Corynebacterium diphtheriae NCTC
13129]
gi|376253148|ref|YP_005141607.1| hypothetical protein CDPW8_0020 [Corynebacterium diphtheriae PW8]
gi|376256043|ref|YP_005143934.1| hypothetical protein CDVA01_0025 [Corynebacterium diphtheriae VA01]
gi|376286557|ref|YP_005159123.1| hypothetical protein CDBH8_0029 [Corynebacterium diphtheriae BH8]
gi|376292146|ref|YP_005163820.1| hypothetical protein CDHC02_0028 [Corynebacterium diphtheriae HC02]
gi|38198927|emb|CAE48538.1| Putative membrane protein [Corynebacterium diphtheriae]
gi|371583891|gb|AEX47556.1| putative membrane protein [Corynebacterium diphtheriae BH8]
gi|372109469|gb|AEX75529.1| putative membrane protein [Corynebacterium diphtheriae HC02]
gi|372116232|gb|AEX68702.1| putative membrane protein [Corynebacterium diphtheriae PW8]
gi|372118560|gb|AEX82294.1| putative membrane protein [Corynebacterium diphtheriae VA01]
Length = 205
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLK---- 77
N R + P TA L A LIYL S+ ++ + W H L Y
Sbjct: 7 MNALKRAYGQAPATAVLCALTILIYLLTVVESRSIEHNLSDSWIADHWTL-YGPYSHGLG 65
Query: 78 --RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLA 134
R + F H+ +HL NM L + G ++E +GS F A +V+ +G S T+LL
Sbjct: 66 WLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGRFTLAYIVSGIGASA--TVLLM 123
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
L VG SG ++ + + + S R A LI+I
Sbjct: 124 DPL------------APTVGASGAVYGLMAIFVAMSYRL----------RRDLTAPLILI 161
Query: 195 ------QMFVPGVSFLGHLGGILAG 213
+ + GVS GHLGG+L G
Sbjct: 162 AVNVGYSLLMDGVSLWGHLGGLLTG 186
>gi|419861887|ref|ZP_14384511.1| hypothetical protein W5M_11313 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387981722|gb|EIK55267.1| hypothetical protein W5M_11313 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 205
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLK---- 77
N R + P TA L A LIYL S+ ++ + W H L Y
Sbjct: 7 MNALKRAYGQTPATAVLCALTILIYLLTVVESRSIEHNLSDSWIADHWTL-YGPYSHGLG 65
Query: 78 --RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLA 134
R + F H+ +HL NM L + G ++E +GS F A +V+ +G S T+LL
Sbjct: 66 WLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGRFTLAYIVSGIGASA--TVLLM 123
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
L VG SG ++ + + + S R A LI+I
Sbjct: 124 DPL------------APTVGASGAVYGLMAIFVAMSYRL----------RRDLTAPLILI 161
Query: 195 ------QMFVPGVSFLGHLGGILAG 213
+ + GVS GHLGG+L G
Sbjct: 162 AVNVGYSLLMDGVSLWGHLGGLLTG 186
>gi|356528366|ref|XP_003532775.1| PREDICTED: HBS1-like protein-like [Glycine max]
Length = 714
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 263 GGSDTRRTA--PIIWRCPACTFDNSGWLSICEMCGTSR 298
GG DT++ P +W+C CT+DN ++ C++CG R
Sbjct: 34 GGPDTKQETIKPGLWQCSICTYDNDESMTFCDICGVVR 71
>gi|282163047|ref|YP_003355432.1| peptidase S54, rhomboid family protein [Methanocella paludicola
SANAE]
gi|282155361|dbj|BAI60449.1| peptidase S54, rhomboid family protein [Methanocella paludicola
SANAE]
Length = 261
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 34/198 (17%)
Query: 28 RLPWKPPVTAALLATNTLIY----LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSP 83
+LP+ AL+A ++Y L P D+L+ S + +P IL S
Sbjct: 68 KLPYSGYYAYALIAITVIVYVLQVLFPGITDALILSSSNLLSHPWGILT---------SI 118
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H+S HLF+NM++L + G LE +GS F LG+ G ++ + +L
Sbjct: 119 FLHSSLMHLFFNMLALFFFGPLLERRIGSGRF-------LGLYFGTGIIAGLAQIL---- 167
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP---- 199
A+ +G SG +F + L + D V+ VP + L + P
Sbjct: 168 --AFPGSAVLGASGAIFGVLGTLTVLTPDLV-VYLYFVPLKMVYVTILFAVLDLFPVLTG 224
Query: 200 ---GVSFLGHLGGILAGI 214
GV+ + HL G+ G+
Sbjct: 225 TSDGVAHIAHLAGLAIGL 242
>gi|410092561|ref|ZP_11289084.1| rhomboid family protein [Pseudomonas viridiflava UASWS0038]
gi|409760069|gb|EKN45235.1| rhomboid family protein [Pseudomonas viridiflava UASWS0038]
Length = 188
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 72 KYKDLKRFFLSPFYHASESHLFYNM---MSLLWKGIQLETSMGSNEFAAMVVALLGMSQG 128
+ L+ F +PF H S HLF N+ M L W L + G +A + G
Sbjct: 40 TFSGLQGIFFAPFIHGSFRHLFGNLLPFMVLSW----LVATEGVKRYAWV--------AG 87
Query: 129 ITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLLVPARYAA 187
+ LL LV F S VG SG++F + L +R+ + V LL A
Sbjct: 88 LICLLGGILVWLFGR-----SSIHVGASGLIFGLWTYLLARAWYQRSLVSLLLAMIALAG 142
Query: 188 WAELIIIQMFVPGVSFLGHLGGILAGILYLKL 219
++ LI + +PG+SF HL G LAG++ +L
Sbjct: 143 YSGLIYGFVPMPGISFESHLAGALAGVVVARL 174
>gi|375292001|ref|YP_005126540.1| hypothetical protein CDB402_0026 [Corynebacterium diphtheriae INCA
402]
gi|376241724|ref|YP_005132576.1| hypothetical protein CDCE8392_0024 [Corynebacterium diphtheriae
CDCE 8392]
gi|376289234|ref|YP_005161481.1| hypothetical protein CDC7B_0026 [Corynebacterium diphtheriae C7
(beta)]
gi|371581672|gb|AEX45338.1| putative membrane protein [Corynebacterium diphtheriae INCA 402]
gi|372102630|gb|AEX66227.1| putative membrane protein [Corynebacterium diphtheriae C7 (beta)]
gi|372104966|gb|AEX71028.1| putative membrane protein [Corynebacterium diphtheriae CDCE 8392]
Length = 214
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLK---- 77
N R + P TA L A LIYL S+ ++ + W H L Y
Sbjct: 16 MNALKRAYGQAPATAVLCALTILIYLLTVVESRSIEHNLSDSWIADHWTL-YGPYSHGLG 74
Query: 78 --RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLA 134
R + F H+ +HL NM L + G ++E +GS F A +V+ +G S T+LL
Sbjct: 75 WLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGRFTLAYIVSGIGASA--TVLLM 132
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
L VG SG ++ + + + S R A LI+I
Sbjct: 133 DPL------------APTVGASGAVYGLMAIFVAMSYRL----------RRDLTAPLILI 170
Query: 195 ------QMFVPGVSFLGHLGGILAG 213
+ + GVS GHLGG+L G
Sbjct: 171 AVNVGYSLLMDGVSLWGHLGGLLTG 195
>gi|326520241|dbj|BAK04045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 681
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 266 DTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR-----SGND 302
++ P++W+C CTFDN + CEMCG R SG D
Sbjct: 49 NSSNAVPVLWKCSMCTFDNHETMVYCEMCGVFRESFVKSGKD 90
>gi|385680095|ref|ZP_10054023.1| membrane protein [Amycolatopsis sp. ATCC 39116]
Length = 256
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 32 KPPVTAALLATNTLIYLRPAFL------DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
+P VT L+ N L Y+ + P + P I + R +S F
Sbjct: 26 RPVVTPILIVLNVLAYVVTVSQAGSLTRNDTAPLFGDGVLWPLAIAGEDEWWRLVMSGFL 85
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYE 144
H HL NM++L G +ET +G F + +V+LLG A ++ LF +
Sbjct: 86 HYGPIHLAVNMLALWILGRDMETLLGRVRFTVLYLVSLLGG--------AVAVYLFDGVD 137
Query: 145 RAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
R + G+L AM V + + G +V +II + +P +S L
Sbjct: 138 RGTAGASGAIY-GLLGAMLVAVIRLRLNPAYAIGTIVLN--------LIITVSLPNISLL 188
Query: 205 GHLGGILAGIL 215
GHLGG++ G L
Sbjct: 189 GHLGGLVVGAL 199
>gi|345480933|ref|XP_001606848.2| PREDICTED: calpain-D-like [Nasonia vitripennis]
Length = 1174
Score = 42.7 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRI 324
S + +A W+C CT++N CEMC +S+S + ++ D+ H + LR +R
Sbjct: 500 SKGKESANTQWQCKLCTYENKSTSGNCEMCQSSKSLSQMAGDRPKLHHEPSMNTLRIQRQ 559
Query: 325 E 325
E
Sbjct: 560 E 560
>gi|357165561|ref|XP_003580426.1| PREDICTED: HBS1-like protein-like [Brachypodium distachyon]
Length = 660
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 266 DTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR 298
++ P++W+C CTFDN + CEMCG R
Sbjct: 48 NSSNKVPVLWKCSMCTFDNHETMVYCEMCGVFR 80
>gi|376244587|ref|YP_005134826.1| hypothetical protein CDHC01_0025 [Corynebacterium diphtheriae HC01]
gi|372107217|gb|AEX73278.1| putative membrane protein [Corynebacterium diphtheriae HC01]
Length = 205
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLK---- 77
N R + P TA L A LIYL S+ ++ + W H L Y
Sbjct: 7 MNALKRAYGQAPATAVLCALTILIYLLTVVESRSIEHNLSDSWIADHWTL-YGPYSHGLG 65
Query: 78 --RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLA 134
R + F H+ +HL NM L + G ++E +GS F A +V+ +G S T+LL
Sbjct: 66 WLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGRFTLAYIVSGIGASA--TVLLM 123
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
L VG SG ++ + + + S R A LI+I
Sbjct: 124 DPL------------APTVGASGAVYGLMAIFVAMSYRL----------RRDLTAPLILI 161
Query: 195 ------QMFVPGVSFLGHLGGILAG 213
+ + GVS GHLGG+L G
Sbjct: 162 AVNVGYSLLMDGVSLWGHLGGLLTG 186
>gi|407368366|ref|ZP_11114898.1| peptidase, S54 (rhomboid) family protein [Pseudomonas mandelii
JR-1]
Length = 187
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
SPF HAS +HL N+++ L G L G N F A+ I +LL +LV F
Sbjct: 50 SPFLHASFAHLSANLIAFLILG-TLVIIEGLNRFIAV--------SAIIILLGGALVWLF 100
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP-- 199
+ + +G SG +F + L SR+ + G L+ A A +I F+P
Sbjct: 101 GFAGVH-----IGASGWVFGLWAYLLSRAW-FQRSWGNLITAGVVALLYGGLIFGFLPRQ 154
Query: 200 GVSFLGHLGGILAGILYLKL 219
GVSF GHL G LAG + K+
Sbjct: 155 GVSFEGHLFGALAGFIAAKV 174
>gi|115460266|ref|NP_001053733.1| Os04g0595300 [Oryza sativa Japonica Group]
gi|113565304|dbj|BAF15647.1| Os04g0595300 [Oryza sativa Japonica Group]
gi|215713566|dbj|BAG94703.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629464|gb|EEE61596.1| hypothetical protein OsJ_16005 [Oryza sativa Japonica Group]
Length = 656
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 270 TAPIIWRCPACTFDNSGWLSICEMCGTSR 298
T P++WRC C FDN + CEMCG R
Sbjct: 55 TVPVLWRCSMCMFDNHESMVYCEMCGVFR 83
>gi|32492336|emb|CAE05476.1| OSJNBa0006A01.22 [Oryza sativa Japonica Group]
gi|39545852|emb|CAE03930.3| OSJNba0093F12.4 [Oryza sativa Japonica Group]
Length = 799
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 270 TAPIIWRCPACTFDNSGWLSICEMCGTSR 298
T P++WRC C FDN + CEMCG R
Sbjct: 55 TVPVLWRCSMCMFDNHESMVYCEMCGVFR 83
>gi|117927224|ref|YP_871775.1| rhomboid family protein [Acidothermus cellulolyticus 11B]
gi|117647687|gb|ABK51789.1| Rhomboid family protein [Acidothermus cellulolyticus 11B]
Length = 287
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 33/195 (16%)
Query: 30 PWKPPVTAALLATNTLIYL------RPAFLDSLVPSIHEVWF-NPHLILKYKDLKRFFLS 82
P + VT L+A N +++L R +L+P E F +P+ + + R +
Sbjct: 72 PQQTAVTYLLIAINAVVFLLEQVSPRFELRYALIPG--ETGFAHPYAGVAGGEFYRLITA 129
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFF 141
F HAS H+ +NM +LL G LE +G F + +A LG S + L +
Sbjct: 130 MFLHASVLHIVFNMWALLVVGAPLEALLGRLRFLVLYFLAGLGGSTAVYLFAPR------ 183
Query: 142 DYERAYYSEYAVGFSGV---LFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV 198
+G SG LFA V R GL++ A + +
Sbjct: 184 -------GSATLGASGAIFGLFAALFVFGRRLNFDIRPIGLVIVINLA-------LTFVL 229
Query: 199 PGVSFLGHLGGILAG 213
GVS+ GH+GG+L+G
Sbjct: 230 SGVSWQGHIGGLLSG 244
>gi|415722834|ref|ZP_11469227.1| rhomboid family membrane protein [Gardnerella vaginalis
00703C2mash]
gi|388064306|gb|EIK86863.1| rhomboid family membrane protein [Gardnerella vaginalis
00703C2mash]
Length = 233
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYHASE- 89
T +++ +++ L + +PS ++++ F P LI K +F S F HA E
Sbjct: 21 TYSIIYICVFVWIIEMILHTFLPSAYQLFVENTAFAPFLITKAS--WTWFTSMFVHAPEL 78
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
+H+ +NM+ L G++LE G +F + A+ G+ + LL L D+ A Y
Sbjct: 79 THILFNMICLYSLGVELERFFGKWKFF-FLYAISGLGGCVATLLYSKLTQ--DWVIAAY- 134
Query: 150 EYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAELII-IQMFVPGVSFLGHL 207
G SG + + +L ++ +V+G L+ W L + + + VP +++ H+
Sbjct: 135 ----GASGAIMGLIGALLVAQWRLGESVNGTLI------WIGLTLAMPLLVPNIAWQAHI 184
Query: 208 GGILAGILYLKLKG 221
GGI+ GI+ L G
Sbjct: 185 GGIVTGIVLSALLG 198
>gi|126651489|ref|ZP_01723693.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
gi|126591742|gb|EAZ85838.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
Length = 207
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFN----PHLILKYKDLKRFFLSPFYHASE 89
PV + L+A N ++Y+ SL+P + + +N + +++ + R F + F HA
Sbjct: 16 PVVSTLIAINLILYVL-----SLLPGVGTLLWNYGIQANFLVQKGEWWRVFSAIFLHAGF 70
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
H+F+NM SL G +LE G F IT+ L +V Y S
Sbjct: 71 MHVFFNMFSLYLFGPELEKIAGKARF-------------ITIYLVSGIVGNMATYIFYDS 117
Query: 150 EYA-VGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLG 208
YA +G SG +F + + +L +I+ P V+ HLG
Sbjct: 118 SYASLGASGAIFGIFGAFGALVYYTRRTMPMLRKLILPIIIISVIMTFLQPNVNVFAHLG 177
Query: 209 GILAGIL 215
G++ G +
Sbjct: 178 GLVTGFI 184
>gi|260906986|ref|ZP_05915308.1| Rhomboid family protein [Brevibacterium linens BL2]
Length = 235
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPS---IHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
P V+ L+ + +I FL L+PS +H + F P L+L+ R H
Sbjct: 15 APSVSPPLVTSIIMILTGVVFLAQLLPSLDLVHRLSFVPALVLEQP--WRVLSVALVHEQ 72
Query: 89 ES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG--ITLLLAKSLVLFFDYE 144
S HL NM+ L + G +E ++G F + + LLG G + L+LAK F +
Sbjct: 73 PSPFHLLANMIGLFFFGSFIERALGRWRF--LTIYLLGTVGGSVMVLVLAKP----FTVD 126
Query: 145 RAYYSEYAVGFSGVLFAMKVVLNSRSEDYT-NVHG--LLVPARYAAWAELIIIQMFVPGV 201
+ +G SG +FA+ VL ++ N+ G L V + V GV
Sbjct: 127 ---WVTNNIGASGAVFAIVGVLLVPTQKLDRNITGVVLFVALNFG-------YGFLVAGV 176
Query: 202 SFLGHLGGILAG 213
S+ HLGG++AG
Sbjct: 177 SWQAHLGGLIAG 188
>gi|405984124|ref|ZP_11042428.1| hypothetical protein HMPREF9451_01546 [Slackia piriformis YIT
12062]
gi|404388260|gb|EJZ83343.1| hypothetical protein HMPREF9451_01546 [Slackia piriformis YIT
12062]
Length = 294
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 29/156 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFN------PHLILKYKDLKRFFLSPFYHAS 88
VT AL+A N ++Y FL I P L+ DL RF F H
Sbjct: 74 VTLALIAINVVVYAVEVFLSGFSFDISSRVLVGMGAMYPPLVQSAADLYRFVTPMFLHLD 133
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAM----------VVALLGMSQG---------- 128
HL +NM++L G LE +G F + V L+GM+ G
Sbjct: 134 LMHLAFNMVALYSVGALLEQVLGKANFVLLYFIGGITGNAVSYLVGMADGGMTVSAGAST 193
Query: 129 --ITLLLAKSLVLFFDYE-RAYYSEYAVGFSGVLFA 161
L +A +L+ E R +++EY+ G GV+ A
Sbjct: 194 SVFGLFVATALLGVLHREGREFFAEYSKGMWGVIAA 229
>gi|285019203|ref|YP_003376914.1| hypothetical protein XALc_2443 [Xanthomonas albilineans GPE PC73]
gi|283474421|emb|CBA16922.1| hypothetical uncharacterized membrane protein [Xanthomonas
albilineans GPE PC73]
Length = 218
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 23/223 (10%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW----FNPHLILKYKDLKRFFLSPF 84
P PPVT ALL N +++L L + + +W F+P + + + F
Sbjct: 2 FPRLPPVTQALLIGNVVVFLLQISLGTATFAPFMLWPIGSFDPFSSGQNFQIWQLLTYAF 61
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H SHL +NM++L G LE + G+ F + + + L + LV ++
Sbjct: 62 LHGGFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVAGAG-----LCQLLVGWWMLR 116
Query: 145 RAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM-------- 196
+G SG +F + + + V L P A +I+
Sbjct: 117 NGSAPYPTLGASGGIFGLLLAFGMLFPN-QRVMLLFPPIPMTARTFVIVFGALELVMGFA 175
Query: 197 -FVPGVSFLGHLGGILAGILYLKLKGGY----SGSDPLTTIIR 234
+ PGV+ HLGG+L G L ++ G G P I+R
Sbjct: 176 GWEPGVAHFAHLGGMLFGWLMIRYWRGQPPFGKGKPPRPRIVR 218
>gi|239629073|ref|ZP_04672104.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519219|gb|EEQ59085.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 206
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 27 HRLPWKPPVTAALLATNTLIYLRPAFL----DSLVPSIHEVWFNPHLILKYKDLKRFFLS 82
+++ K V AL+A N LI+L + D++ +H + P ++L+ + R F S
Sbjct: 4 YKIRDKAYVNIALIAVNVLIFLYFELIGDTEDTMFMIMHGAVYEPLVVLR-GEYYRLFTS 62
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEF 115
F H SHL NM+ L G ++E +G ++
Sbjct: 63 MFLHFGASHLVNNMLVLFVLGERMEQVLGHVKY 95
>gi|153853648|ref|ZP_01995028.1| hypothetical protein DORLON_01019 [Dorea longicatena DSM 13814]
gi|149753803|gb|EDM63734.1| peptidase, S54 family [Dorea longicatena DSM 13814]
Length = 204
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 32 KPPVTAALLATNTLIYLRPAFL----DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
K P T L A N +++L +FL D H + P+LI + + R F S F H
Sbjct: 7 KAPCTILLAAVNVIVFLVLSFLGMTEDGEFMLKHGAMYVPYLIQR-GEYYRLFSSMFLHF 65
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEF 115
HL NM+ L+ G LE +G +F
Sbjct: 66 GYDHLVNNMIVLVAMGWNLELDIGKVKF 93
>gi|374815406|ref|ZP_09719143.1| rhomboid family protein [Treponema primitia ZAS-1]
Length = 207
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 27/199 (13%)
Query: 35 VTAALLATNTLIYL----RPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
V ++ N L+Y+ P F L NP LI + +F F H S
Sbjct: 15 VVLYIIGINVLVYIMQRINPRFTSYLA-------LNPILIQR-GFYWQFVTYMFAHGGIS 66
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
H+ +NM++L G Q+E MGS EF +S GI LA L + Y
Sbjct: 67 HILFNMLALFIFGAQVERRMGSKEFLVYY-----LSTGI---LAGFLSFVIYWFTGSYGV 118
Query: 151 YAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR-------YAAWAELIIIQMFVPGVSF 203
+ +G SG LFA+++ + D ++P + + A + F GV+
Sbjct: 119 FLLGASGALFAVQLAYATFFPDSVIYLWGILPLKAPIMVLGFTALELFSSVTGFRSGVAH 178
Query: 204 LGHLGGILAGILYLKLKGG 222
L HL G G +Y ++ G
Sbjct: 179 LTHLAGFAFGWIYFLVRFG 197
>gi|356545465|ref|XP_003541163.1| PREDICTED: rhomboid protein 2-like [Glycine max]
Length = 271
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL +G + + L+ +S + L +
Sbjct: 53 RIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMY 112
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAELI 192
L+ F E + AVG+S V+F +L+ + ++ G L +P +A + LI
Sbjct: 113 HLLIQRFKLEY-FRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLI 171
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SFLGHL GI+ G
Sbjct: 172 FTSIIVPQASFLGHLSGIVVG 192
>gi|339498801|ref|YP_004696836.1| peptidase S54, rhomboid domain-containing protein [Spirochaeta
caldaria DSM 7334]
gi|338833150|gb|AEJ18328.1| Peptidase S54, rhomboid domain protein [Spirochaeta caldaria DSM
7334]
Length = 211
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEF 115
N L+L+Y + +FF F H SHL NM+ L + G +E MGS EF
Sbjct: 46 NTQLVLRYGMVWQFFTYMFAHGGISHLLLNMLGLFFFGTPVERQMGSKEF 95
>gi|418423189|ref|ZP_12996358.1| rhomboid family protein [Mycobacterium abscessus subsp. bolletii
BD]
gi|363993164|gb|EHM14390.1| rhomboid family protein [Mycobacterium abscessus subsp. bolletii
BD]
Length = 252
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 34 ITWALIAVNVLVY-TATLSDGVDGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 92
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 93 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 142
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 143 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 189
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 190 AGHMGGLLFGVL 201
>gi|242056443|ref|XP_002457367.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
gi|241929342|gb|EES02487.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
Length = 338
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 81/205 (39%), Gaps = 45/205 (21%)
Query: 16 PLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKD 75
P L AF + P P +A LL A S V HE W
Sbjct: 120 PELGRFAFQSFKENPLIGPTSATLLEMG-------ALETSKVTKDHEGW----------- 161
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R + HA H+ NM+SLL GI+LE EF + + L + G+ L
Sbjct: 162 --RLITCIWLHAGVIHILANMLSLLMIGIRLE-----KEFGFIRIGTLYVISGVGGSLLS 214
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSR-SEDYTNVHGLLVPARYAAWAELIII 194
SL + S +VG SG LF + L S SE TN + ++AA L++I
Sbjct: 215 SLFM--------VSNISVGASGALFGL---LGSMLSELITNWT--IYENKFAALLTLVMI 261
Query: 195 QM------FVPGVSFLGHLGGILAG 213
+ +P V HLGG ++G
Sbjct: 262 IVINLAVGILPHVDNFAHLGGFMSG 286
>gi|417555956|ref|ZP_12207018.1| peptidase, S54 family [Gardnerella vaginalis 315-A]
gi|333603279|gb|EGL14697.1| peptidase, S54 family [Gardnerella vaginalis 315-A]
Length = 233
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYHA-SE 89
T +L+ ++L L + P++++V F+P LI K + +F S F H+
Sbjct: 21 TYSLIYICVFVWLVEIILHTFSPNLYQVLIENTAFSPFLI--KKSIWTWFTSMFVHSPGF 78
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
SH+F+NM+ L GI+LE G +F + A+ G+ + LL + + S
Sbjct: 79 SHIFFNMLCLYSLGIELEKFFGRCKF-FFLYAISGLGGCVATLLYCRMT-----GNWFLS 132
Query: 150 EYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAELII-IQMFVPGVSFLGHL 207
Y G SG + + +L ++ N G L+ W L + + + +P +++ H+
Sbjct: 133 AY--GASGAIMGLIGALLVAQWRLGENTRGTLI------WIALTLAMPIIIPNIAWQAHV 184
Query: 208 GGILAGILYLKLKG 221
GG++ G + L G
Sbjct: 185 GGLITGTILATLLG 198
>gi|357134029|ref|XP_003568622.1| PREDICTED: uncharacterized protein LOC100834911 [Brachypodium
distachyon]
Length = 417
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 48/219 (21%)
Query: 16 PLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKD 75
P L AF Y P P +A LL A S V HE W
Sbjct: 116 PELGRFAFQSYRENPLVGPSSATLLKMG-------ALETSKVAKDHEGW----------- 157
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R + HA H+ NM+SLL GI+LE EF + + L + G+ L
Sbjct: 158 --RLITCIWLHAGVIHILANMLSLLMIGIRLE-----KEFGFLRIGTLYVISGVGGSLLS 210
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQ 195
+L + S +VG SG LF + + + SE TN + ++AA L++I
Sbjct: 211 ALFMV--------SNISVGASGALFGL--LGSMLSELITN--WTIYENKFAALLTLVMII 258
Query: 196 M------FVPGVSFLGHLGGILAG-----ILYLKLKGGY 223
+P V H+GG ++G +L ++ + GY
Sbjct: 259 AINLAVGILPHVDNFAHIGGFISGFFLGFVLLIRPQFGY 297
>gi|296127888|ref|YP_003635138.1| rhomboid family protein [Cellulomonas flavigena DSM 20109]
gi|296019703|gb|ADG72939.1| Rhomboid family protein [Cellulomonas flavigena DSM 20109]
Length = 238
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 30/187 (16%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW-FNPHLILKYKDLKRFFLSPFYHASES 90
+P VT ++ Y+ L VP W F+P + + RF + F H++
Sbjct: 29 RPIVTLTIIGLCVASYV----LQLAVPGWTSRWAFSP--VAGAFEPWRFLTAAFLHSTGV 82
Query: 91 -HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ +NM++L G LE ++G FA + +V+ LG S G LL + +
Sbjct: 83 FHILFNMVALWMVGPSLEQTLGRARFATLYLVSALGGSVGAVLLAPAT---------GSW 133
Query: 149 SEYAVGFSGVLFAM----KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
VG SG +F M VVL D + G+LV ++ +P +++
Sbjct: 134 LTPIVGASGAVFGMFGAVLVVLRRMGRDAGPIIGILVLNG--------VLGFVLPNIAWQ 185
Query: 205 GHLGGIL 211
HLGG++
Sbjct: 186 AHLGGLV 192
>gi|195346158|ref|XP_002039634.1| GM23078 [Drosophila sechellia]
gi|194134860|gb|EDW56376.1| GM23078 [Drosophila sechellia]
Length = 1627
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 258 GRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS-GNDLSSDQLSRHS 312
G G VG S + + W+CPACT+DN +C++C + R + + + L R S
Sbjct: 906 GAGAVGASTSSKK----WQCPACTYDNCAASVVCDICSSPRGLASSVLGEALGRKS 957
>gi|357606300|gb|EHJ65003.1| hypothetical protein KGM_07826 [Danaus plexippus]
Length = 929
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 245 RFARYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLS 304
R + R R R T G+DTRR W C CT+ N CEMCG S+ G ++
Sbjct: 837 RTPKQNGERERTPNR-TDEGTDTRRDK---WECNTCTYLNKNAAVACEMCGKSKKGPEIE 892
>gi|57640721|ref|YP_183199.1| integral membrane protein rhomboid-like protein [Thermococcus
kodakarensis KOD1]
gi|57159045|dbj|BAD84975.1| integral membrane protein Rhomboid homolog [Thermococcus
kodakarensis KOD1]
Length = 206
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 34/203 (16%)
Query: 21 HAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDS--------LVPSIHEVWFNPHLILK 72
H F+ Y R T L N +Y+ A L V ++ W + +L
Sbjct: 5 HYFHRYGR------ATFTLFLINVAVYVVEAVLSGGNFLSIRGSVLALLGQW--NYAVLN 56
Query: 73 YKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLL 132
Y + F + F H + H+F+NM LL G QLE +G M+ ++ L
Sbjct: 57 YGYWWQLFTAMFVHVNIIHIFFNMYFLLTMGRQLERVLGPRRVV--------MTYIVSGL 108
Query: 133 LAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDY-TNVHGLLVPARYAAWAEL 191
+ L LF + G SG LF + L + S N+ ++ A + L
Sbjct: 109 VGNVLTLFLKPPM----TVSAGASGALFGIVGALITISGVVGGNMQAAMMNAFF-----L 159
Query: 192 IIIQMFVPGVSFLGHLGGILAGI 214
+I +PGV+ HLGG+LAGI
Sbjct: 160 FLINSVLPGVNAYAHLGGLLAGI 182
>gi|347755936|ref|YP_004863500.1| hypothetical protein [Candidatus Chloracidobacterium thermophilum
B]
gi|347588454|gb|AEP12984.1| putative membrane protein [Candidatus Chloracidobacterium
thermophilum B]
Length = 424
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 80/194 (41%), Gaps = 27/194 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVW--FNPHLILKYKDLKRFFLSPFYHAS 88
+ P++ L+ N ++L AF S P + + N LI ++ R + F H
Sbjct: 57 RAPLSYVLIGINVAMFLLTAFAGGSTDPDVLTAFGACNRKLI-DQGEVWRLVVPMFLHIG 115
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
HL NM +L G QLE+ GS F +L + GI +A Y A+
Sbjct: 116 MIHLLANMYALWVLGPQLESLYGSARF-----TILYLLSGIGGFVA-------SYFFAHP 163
Query: 149 SEYAVGFSGVLFAM-----KVVLNSRSEDYTNVHGLLVPARYAAWAELII---IQMFVPG 200
G SG LF M V R+E V + + W LII I +P
Sbjct: 164 ESIGAGASGALFGMFGALLVFVYKYRAEIPPMVRATM---QRGVWLTLIINLVITFSIPF 220
Query: 201 VSFLGHLGGILAGI 214
+S GH+GG+L GI
Sbjct: 221 ISRSGHVGGLLTGI 234
>gi|311742190|ref|ZP_07716000.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
gi|311314683|gb|EFQ84590.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
Length = 283
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F HA HL +NM +L G +E ++GS + A + + S + LL
Sbjct: 124 RLLTSAFLHAGVLHLLFNMYALYLFGPFVERALGSARYVAAYLTMAVFSGAVVYLLTDP- 182
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAM---KVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
+ VG SG +F + +VL R++ +V LLV L
Sbjct: 183 -----------RTFTVGASGAVFGLFGYALVLLVRAKQ--DVRTLLVLLAVNGVISL--- 226
Query: 195 QMFVPGVSFLGHLGGILAGI 214
P +S+ GHLGG +AG+
Sbjct: 227 ---APNISWQGHLGGFIAGL 243
>gi|386347942|ref|YP_006046191.1| rhomboid family protein [Spirochaeta thermophila DSM 6578]
gi|339412909|gb|AEJ62474.1| Rhomboid family protein [Spirochaeta thermophila DSM 6578]
Length = 213
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFY 94
VT L+ N L++ L ++ + NP +LK + + F HAS +H+ +
Sbjct: 18 VTLYLIGANLLVFFLTYLNRGL---LYYMALNPLYLLKGGMVWQLVSYMFAHASFNHILF 74
Query: 95 NMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVG 154
NM+ L + G+Q+E MGS EF + G+ G+ LL L Y + +G
Sbjct: 75 NMLGLFFFGLQVEREMGSREF-LLFYFFTGIFAGLVSLLVYWL-------SGAYGVFLLG 126
Query: 155 FSGVLFAMKVVLNSRSEDYTNVHGLL-----VPARY--AAWAELIIIQMF--VPGVSFLG 205
SGV++ VL + + Y L VPA Y + + ++ F V+ L
Sbjct: 127 ASGVVYG---VLLAFATFYPRARIFLFGIFPVPAPYLVIGYTAIELLAQFGAQDNVAHLT 183
Query: 206 HLGGILAGILYLKLKGGYS 224
HL G LYL L+ G S
Sbjct: 184 HLAGFAGAYLYLVLRLGIS 202
>gi|356538887|ref|XP_003537932.1| PREDICTED: rhomboid protein 2-like [Glycine max]
Length = 271
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL +G + + L+ +S + L +
Sbjct: 53 RIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMY 112
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAELI 192
L+ F E + AVG+S V+F +L+ + ++ G L +P +A + LI
Sbjct: 113 HLLIERFKLEY-FRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLI 171
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SFLGHL GI+ G
Sbjct: 172 FTSIIVPQASFLGHLSGIVVG 192
>gi|295107889|emb|CBL21842.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Ruminococcus obeum A2-162]
Length = 200
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEV----WFNPHLILKYKDLKRFFLSPFYHA 87
K PVT L+ N +++L F S +IH + + P +I++ + R F F H
Sbjct: 9 KEPVTVGLILINIIVFLAVEFTGSSQNTIHMLDCGAAYTP-MIIEGGEYYRLFTCMFLHF 67
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
HL NM+ L G +LE +G +F +++ L+G
Sbjct: 68 GIEHLLNNMLVLFVLGSRLERVIGKIKF--LIIYLVG 102
>gi|255634698|gb|ACU17711.1| unknown [Glycine max]
Length = 271
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL +G + + L+ +S + L +
Sbjct: 53 RIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMY 112
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAELI 192
L+ F E + AVG+S V+F +L+ + ++ G L +P +A + LI
Sbjct: 113 HLLIERFKLEY-FRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLI 171
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ VP SFLGHL GI+ G
Sbjct: 172 FTSIIVPQASFLGHLSGIVVG 192
>gi|151942556|gb|EDN60902.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407719|gb|EDV10984.1| rhomboid protease [Saccharomyces cerevisiae RM11-1a]
gi|207340765|gb|EDZ69014.1| YPL246Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270648|gb|EEU05813.1| Rbd2p [Saccharomyces cerevisiae JAY291]
gi|259149911|emb|CAY86714.1| Rbd2p [Saccharomyces cerevisiae EC1118]
gi|323302636|gb|EGA56442.1| Rbd2p [Saccharomyces cerevisiae FostersB]
gi|323306904|gb|EGA60188.1| Rbd2p [Saccharomyces cerevisiae FostersO]
gi|323335253|gb|EGA76542.1| Rbd2p [Saccharomyces cerevisiae Vin13]
gi|323346079|gb|EGA80369.1| Rbd2p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581576|dbj|GAA26733.1| K7_Rbd2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365762680|gb|EHN04213.1| Rbd2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 262
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 10/179 (5%)
Query: 38 ALLATNTLIYLRPAFLDSLVPSIHE-VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNM 96
A L T +++L +L S + ++ E + P + K + + R L P H S HL +N+
Sbjct: 15 AALTTGLVVFLTAIYLLSFIFALREDLSLAPESLFKLQ-MSRLSLYPLIHLSLPHLLFNV 73
Query: 97 MSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFS 156
+++ W + L + + + L + GI L L+ Y + A G+
Sbjct: 74 LAI-WAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLL----YPEVLVAG-ASGWC 127
Query: 157 GVLFAMKVVLNSRSEDYTNVH--GLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAG 213
LFA S+ T + +P Y L+ I + +PG SF GH G+ G
Sbjct: 128 FTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHFFGLCVG 186
>gi|443626016|ref|ZP_21110448.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
gi|443340440|gb|ELS54650.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
Length = 313
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H S H+ +NM+SL W G LE ++G + A+ + +T L+A +
Sbjct: 152 RLLTSMFLHGSYIHILFNMLSLWWIGGPLEAALGRVRYIALYLVSGLAGSALTYLIAAA- 210
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
++ ++G SG +F A V++ D V LLV +I
Sbjct: 211 -----------NQPSLGASGAIFGLFGATAVLMRRLQYDMRPVIALLVIN--------LI 251
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
+ +++ H+GG++AG+L
Sbjct: 252 FTFGLAQIAWQAHIGGLVAGLL 273
>gi|255577227|ref|XP_002529496.1| Rhomboid protein, putative [Ricinus communis]
gi|223531054|gb|EEF32906.1| Rhomboid protein, putative [Ricinus communis]
Length = 269
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGI--QL-ETSMGSNEFAAMVVALLGMSQGITLLLA 134
R S F H S HL +NM +L G+ QL +G + + L+ +S + L +
Sbjct: 53 RIITSAFSHISVLHLVFNMSALWSLGVVEQLGHMGLGIAYYLHYTLVLVVLSGVLVLGMY 112
Query: 135 KSLVLFF--DYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAE 190
+ L+ F DY R AVG+S V+F +L+ + ++ G L +P +A +
Sbjct: 113 RILIQRFKVDYFR---RVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFES 169
Query: 191 LIIIQMFVPGVSFLGHLGGILAG 213
LI + VP SFLGHL GI+ G
Sbjct: 170 LIFTSIIVPQASFLGHLSGIIVG 192
>gi|119472796|ref|XP_001258417.1| rhomboid family protein, putative [Neosartorya fischeri NRRL 181]
gi|119406569|gb|EAW16520.1| rhomboid family protein, putative [Neosartorya fischeri NRRL 181]
Length = 272
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 16/182 (8%)
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-MSQGITLLLAKSLVLFF 141
PF H H F N+++L + E G+ A+ + L GI +L+ K ++
Sbjct: 72 PFIHVGFFHAFVNLLALTPLLERFEAEHGTLTAVALFIGPLSTFPAGIYILIEKFIL--- 128
Query: 142 DYERAYYSEYAVGFSGV----LFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
+S AV + V L + + +S Y ++ +P + ++ +F
Sbjct: 129 ------HSNTAVVGASVWVFLLLGSEAIKTFKSNPYFSLGTTKIPTWTSPLFACALVSIF 182
Query: 198 VPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIY 257
VP SFLGHL I+ G YL G P I+R G L+ R Y+ + Y
Sbjct: 183 VPNTSFLGHLSAIIIG--YLLGLGYLKVFVPPEKILRWIEGKLNLLGRLPHYVSVDQKTY 240
Query: 258 GR 259
GR
Sbjct: 241 GR 242
>gi|284047014|ref|YP_003397354.1| rhomboid family protein [Conexibacter woesei DSM 14684]
gi|283951235|gb|ADB53979.1| Rhomboid family protein [Conexibacter woesei DSM 14684]
Length = 228
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 21/146 (14%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
+ + D R F S F HA+ +HLF N+++L+ G L + G +
Sbjct: 63 VDHGDWYRIFTSAFLHANAAHLFGNLVALVILGGVLTLAAGPLRMV--------LVYATG 114
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMK---VVLNSRSEDYTNVHGLLVPARYAA 187
LL + VL F E VG SG +F + +V+ R V L+ A +
Sbjct: 115 LLGSAFSVLAFAPE-----TLTVGASGAIFGLAGGALVVGWRQR---RVLLLIFAAGWTV 166
Query: 188 WAELIIIQMFVPGVSFLGHLGGILAG 213
+A + +FVPG+S GHLGG++AG
Sbjct: 167 YA--LSSTLFVPGISQAGHLGGLVAG 190
>gi|417938970|ref|ZP_12582263.1| peptidase, S54 family [Streptococcus infantis SK970]
gi|343390415|gb|EGV02995.1| peptidase, S54 family [Streptococcus infantis SK970]
Length = 224
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 28/193 (14%)
Query: 34 PVTAALLATNTLIY----LRPAFLDSLVPSIHE--VWFNPHLILKYKDLKRFFLSPFYHA 87
PVT+ L TL++ L F + ++++ + P + + + R F + F H
Sbjct: 10 PVTSFFLLVTTLVFVLMFLTSGFNYTSAATLYQFGAVYPPAIKAMPEQIWRLFSATFVHI 69
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H NM+SL + G Q+E GS +F + L GM + +L+ + A
Sbjct: 70 GLEHFLVNMLSLYFLGRQMEQIFGSKQF-FFIYLLSGMMGNLFVLVFSPNAITAGASTAL 128
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQM----FVPGVS 202
Y +FA VVL S + Y G ++ L++I + +PG+S
Sbjct: 129 YG---------MFASIVVLRYASRNPYLQQLG-------QSYLSLLVINLVGSVLIPGIS 172
Query: 203 FLGHLGGILAGIL 215
GHLGG + G L
Sbjct: 173 LAGHLGGAVGGAL 185
>gi|383783179|ref|YP_005467746.1| hypothetical protein AMIS_80100 [Actinoplanes missouriensis 431]
gi|381376412|dbj|BAL93230.1| hypothetical protein AMIS_80100 [Actinoplanes missouriensis 431]
Length = 301
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 58/139 (41%), Gaps = 18/139 (12%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R F F H HL NMM + G LE +G F A+ + G+ +A L
Sbjct: 139 RLFTGMFLHYGVLHLLLNMMLVAQLGRYLEAQLGPARFVALY-----LIAGVGGNVAAYL 193
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRS-EDYTNVHGLLVPARYAAWAELIIIQM 196
+ A S G L +VLN R+ D + + LLV +I
Sbjct: 194 FQAPNQPSAGASTATFG----LVIAAIVLNRRTGRDSSQLVPLLVIN--------LIFTF 241
Query: 197 FVPGVSFLGHLGGILAGIL 215
+PG+S GHLGG++AG L
Sbjct: 242 TIPGISIAGHLGGLVAGAL 260
>gi|365872871|ref|ZP_09412407.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|363992937|gb|EHM14164.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
Length = 252
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 34 ITWALIAVNVLVY-TATVSDGVDGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 92
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 93 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 142
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 143 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 189
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 190 AGHMGGLLFGVL 201
>gi|402217084|gb|EJT97166.1| hypothetical protein DACRYDRAFT_59608 [Dacryopinax sp. DJM-731 SS1]
Length = 532
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 252 RRPRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTS 297
RRP+ T+ + + T+ + CPACTF N +L+ CE+C TS
Sbjct: 167 RRPQTTCSLTINENRSEETSDGLIPCPACTFLNHPYLTACEICSTS 212
>gi|383821590|ref|ZP_09976832.1| hypothetical protein MPHLEI_19664 [Mycobacterium phlei RIVM601174]
gi|383332932|gb|EID11395.1| hypothetical protein MPHLEI_19664 [Mycobacterium phlei RIVM601174]
Length = 248
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
KP VT L+A N L++L A L E P+ + + R S F H +H
Sbjct: 35 KPTVTYTLIAVNVLVFLLQAVLPGFT---REFVLQPYAVAD-GEFYRLLTSAFLHYGLTH 90
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAM 118
+ +NM +L G LE ++G F +
Sbjct: 91 ILFNMWALYVVGPALEAALGRLRFVGL 117
>gi|307186108|gb|EFN71833.1| Calpain-D [Camponotus floridanus]
Length = 1386
Score = 42.0 bits (97), Expect = 0.37, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 14/71 (19%)
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSD--------------QLSR 310
S TR + W+C CT++N +CEMC +S+S + +S D ++ R
Sbjct: 711 SRTRDPSHTQWQCKLCTYENKSTTVVCEMCQSSKSLSQVSGDRGIPRLLESGTSTLRIQR 770
Query: 311 HSNIPLEELRH 321
++ +E LR
Sbjct: 771 QESVVMENLRQ 781
>gi|227515651|ref|ZP_03945700.1| S54 family peptidase [Lactobacillus fermentum ATCC 14931]
gi|227086081|gb|EEI21393.1| S54 family peptidase [Lactobacillus fermentum ATCC 14931]
Length = 221
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 21/196 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPS--IHEVWFNPHLILKYKDLKRFFLSPFYHASE 89
+ P+T L+ L+YL S + + N ++ R F + F H
Sbjct: 7 QAPLTCCLVGVCVLVYLLEELAGGATNSATLLNLGANYGPFVRAGQWWRVFTAAFLHIGL 66
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
+HLF NMM L + G +E G A V+ L+ + G +LV + +
Sbjct: 67 THLFLNMMVLYYLGRTIEELTGHLRMA--VIYLVSILMG-------NLVSVAVHPVTISA 117
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM----FVPGVSFLG 205
+ G G LF + + S Y + GL AR + L+II + PG+ G
Sbjct: 118 GASTGIFG-LFGAFLFMGSEFRQYPALRGL---AR--QYLILVIINLVYDLIAPGIDIFG 171
Query: 206 HLGGILAGILYLKLKG 221
HLGG++ G L L G
Sbjct: 172 HLGGLVGGFLACALVG 187
>gi|389861756|ref|YP_006363995.1| Rhomboid Peptidase S54 [Modestobacter marinus]
gi|388483958|emb|CCH85490.1| Rhomboid Peptidase S54 [Modestobacter marinus]
Length = 246
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 34 PVTAALLATNTLIYLRPAFL------DSLVPSIHEVWFNPHLI---LKYKDLKRFFLSPF 84
PVT L+ N ++L A L D L +E++ + + ++ D R F + F
Sbjct: 39 PVTLTLIGINVAMFLLTAVLTGIGGQDPLQNYRNELFQDLAQVPVFVQIGDWWRPFTAAF 98
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
H HL NM+SLL G +LE +G + + +V++ G + I LL F
Sbjct: 99 LHYGVLHLGLNMLSLLVFGSELERLLGRGRYLVVYLVSIAGGAAAIQLLGTP----FGQV 154
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
A + Y G++ A VVL + +D + GLLV + ++ F+PGVS
Sbjct: 155 AGASTAIY-----GLMGAFGVVLVHQKQD---LRGLLV------LLGINLVISFLPGVSL 200
Query: 204 LGH 206
+GH
Sbjct: 201 IGH 203
>gi|408530693|emb|CCK28867.1| integral membrane protein [Streptomyces davawensis JCM 4913]
Length = 296
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 27/144 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H S HL +NM+SL W G LE ++G + A+ + LLA+
Sbjct: 134 RLLTSMFLHGSVIHLLFNMLSLWWLGGPLEAALGRARYLALYFVSGLAGSALAYLLAEP- 192
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+ +G SG +F A V++ + D + LL + +
Sbjct: 193 -----------NTATLGASGAIFGLFGATAVLMRRLNYDMRPIIALLA---------INL 232
Query: 194 IQMFVPG--VSFLGHLGGILAGIL 215
I F PG +S+ H+GG++AG++
Sbjct: 233 IFTFSPGFNISWQAHIGGLVAGVV 256
>gi|421036084|ref|ZP_15499101.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-S]
gi|392219936|gb|EIV45460.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-S]
Length = 252
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 34 ITWALIAVNVLVY-TATVSDGVGGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 92
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 93 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 142
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 143 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 189
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 190 AGHMGGLLFGVL 201
>gi|224121372|ref|XP_002330811.1| predicted protein [Populus trichocarpa]
gi|222872613|gb|EEF09744.1| predicted protein [Populus trichocarpa]
Length = 658
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSRS 299
+W CP CT+DN +S C++CG RS
Sbjct: 43 VWSCPICTYDNDESMSACDICGVIRS 68
>gi|414584256|ref|ZP_11441396.1| rhomboid family protein [Mycobacterium abscessus 5S-1215]
gi|420881430|ref|ZP_15344797.1| rhomboid family protein [Mycobacterium abscessus 5S-0304]
gi|420884483|ref|ZP_15347843.1| rhomboid family protein [Mycobacterium abscessus 5S-0421]
gi|420887277|ref|ZP_15350635.1| rhomboid family protein [Mycobacterium abscessus 5S-0422]
gi|420896232|ref|ZP_15359571.1| rhomboid family protein [Mycobacterium abscessus 5S-0708]
gi|420901413|ref|ZP_15364744.1| rhomboid family protein [Mycobacterium abscessus 5S-0817]
gi|420907312|ref|ZP_15370630.1| rhomboid family protein [Mycobacterium abscessus 5S-1212]
gi|420974770|ref|ZP_15437960.1| rhomboid family protein [Mycobacterium abscessus 5S-0921]
gi|421052000|ref|ZP_15514994.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392080246|gb|EIU06072.1| rhomboid family protein [Mycobacterium abscessus 5S-0421]
gi|392086339|gb|EIU12164.1| rhomboid family protein [Mycobacterium abscessus 5S-0304]
gi|392093991|gb|EIU19787.1| rhomboid family protein [Mycobacterium abscessus 5S-0422]
gi|392095544|gb|EIU21339.1| rhomboid family protein [Mycobacterium abscessus 5S-0708]
gi|392098774|gb|EIU24568.1| rhomboid family protein [Mycobacterium abscessus 5S-0817]
gi|392105216|gb|EIU31002.1| rhomboid family protein [Mycobacterium abscessus 5S-1212]
gi|392119408|gb|EIU45176.1| rhomboid family protein [Mycobacterium abscessus 5S-1215]
gi|392159888|gb|EIU85581.1| rhomboid family protein [Mycobacterium abscessus 5S-0921]
gi|392240603|gb|EIV66096.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898]
Length = 247
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 29 ITWALIAVNVLVY-TATVSDGVDGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 87
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 88 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 137
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 138 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 184
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 185 AGHMGGLLFGVL 196
>gi|420912660|ref|ZP_15375972.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-R]
gi|420919114|ref|ZP_15382417.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-S]
gi|420924284|ref|ZP_15387580.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-S]
gi|420929944|ref|ZP_15393223.1| rhomboid family protein [Mycobacterium abscessus 6G-1108]
gi|420969638|ref|ZP_15432841.1| rhomboid family protein [Mycobacterium abscessus 3A-0810-R]
gi|420980281|ref|ZP_15443458.1| rhomboid family protein [Mycobacterium abscessus 6G-0212]
gi|420985667|ref|ZP_15448834.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-R]
gi|421009768|ref|ZP_15472877.1| rhomboid family protein [Mycobacterium abscessus 3A-0119-R]
gi|421010496|ref|ZP_15473600.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-R]
gi|421020930|ref|ZP_15483986.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-S]
gi|421025708|ref|ZP_15488751.1| rhomboid family protein [Mycobacterium abscessus 3A-0731]
gi|421031230|ref|ZP_15494260.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-R]
gi|392112005|gb|EIU37775.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-S]
gi|392114654|gb|EIU40423.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-R]
gi|392126932|gb|EIU52683.1| rhomboid family protein [Mycobacterium abscessus 6G-1108]
gi|392128937|gb|EIU54687.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-S]
gi|392164559|gb|EIU90248.1| rhomboid family protein [Mycobacterium abscessus 6G-0212]
gi|392170663|gb|EIU96341.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-R]
gi|392195374|gb|EIV20993.1| rhomboid family protein [Mycobacterium abscessus 3A-0119-R]
gi|392206653|gb|EIV32236.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-S]
gi|392209231|gb|EIV34803.1| rhomboid family protein [Mycobacterium abscessus 3A-0731]
gi|392216607|gb|EIV42150.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-R]
gi|392219112|gb|EIV44637.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-R]
gi|392245294|gb|EIV70772.1| rhomboid family protein [Mycobacterium abscessus 3A-0810-R]
Length = 247
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 29 ITWALIAVNVLVY-TATVSDGVGGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 87
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 88 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 137
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 138 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 184
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 185 AGHMGGLLFGVL 196
>gi|420866475|ref|ZP_15329864.1| rhomboid family protein [Mycobacterium abscessus 4S-0303]
gi|420871266|ref|ZP_15334648.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RA]
gi|420875716|ref|ZP_15339092.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RB]
gi|420988850|ref|ZP_15452006.1| rhomboid family protein [Mycobacterium abscessus 4S-0206]
gi|421040347|ref|ZP_15503355.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-R]
gi|421046065|ref|ZP_15509065.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-S]
gi|392065191|gb|EIT91040.1| rhomboid family protein [Mycobacterium abscessus 4S-0303]
gi|392067191|gb|EIT93039.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RB]
gi|392070736|gb|EIT96583.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RA]
gi|392183129|gb|EIV08780.1| rhomboid family protein [Mycobacterium abscessus 4S-0206]
gi|392221275|gb|EIV46798.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-R]
gi|392235518|gb|EIV61016.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-S]
Length = 247
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 29 ITWALIAVNVLVY-TATVSDGVDGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 87
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 88 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 137
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 138 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 184
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 185 AGHMGGLLFGVL 196
>gi|395768820|ref|ZP_10449335.1| hypothetical protein Saci8_03541 [Streptomyces acidiscabies 84-104]
Length = 298
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H S H+ N +SL W G LE ++G + A+ +T L+A+
Sbjct: 137 RLLTSMFLHGSIIHILSNALSLWWIGGPLEAALGRARYLALFFVSGLAGSALTYLVAEP- 195
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
++ ++G SG +F AM V++ + D + +LV +I
Sbjct: 196 -----------NQASLGASGAIFGVFGAMAVLMRRQRYDMRPMIAILVIN--------LI 236
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
I G+++ H+GG++AG++
Sbjct: 237 ITFGWSGIAWQAHVGGLVAGVI 258
>gi|340358738|ref|ZP_08681246.1| rhomboid family protein [Actinomyces sp. oral taxon 448 str. F0400]
gi|339885875|gb|EGQ75566.1| rhomboid family protein [Actinomyces sp. oral taxon 448 str. F0400]
Length = 280
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 22/148 (14%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLL--LAK 135
RF + F HAS HL +NM +L G LE +G FAA+ V L G T++ LA
Sbjct: 114 RFVTTAFLHASLWHLAFNMWALWVLGSALEPVLGRWRFAALYV--LSAVGGSTMIYWLAS 171
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
+ + + + VG SG +F A+ ++ + D + + GLL A
Sbjct: 172 PVTM------SSWWGLTVGASGAVFGLFAALFIIQHRFGRDTSGILGLL--------AVN 217
Query: 192 IIIQMFVPGVSFLGHLGGILAGILYLKL 219
+ I +S+ GHLGG+ G L L
Sbjct: 218 LAISFMGEYISWQGHLGGLATGALIAAL 245
>gi|227502265|ref|ZP_03932314.1| rhomboid family protein [Corynebacterium accolens ATCC 49725]
gi|227077089|gb|EEI15052.1| rhomboid family protein [Corynebacterium accolens ATCC 49725]
Length = 215
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 29/140 (20%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEF-AAMVVALLGMSQGITLLLAKSLVLF 140
S F H HL NM+ LL G ++E ++ + + AA +V+ LG A ++VL+
Sbjct: 63 SEFMHLDGGHLAVNMVMLLLIGREVERALNTGLYIAAYLVSCLG---------ASAMVLW 113
Query: 141 FDYERAYYSEYAVGFSGVLFAMKVVL----NSRSEDY-TNVHGLLVPARYAAWAELIIIQ 195
FD+ VG SG +FA+ +L R D + +LV Y AE
Sbjct: 114 FDF-----GTPTVGASGAIFALMGMLVGVFRQRGMDLRAPIVLVLVNVGYTFVAE----- 163
Query: 196 MFVPGVSFLGHLGGILAGIL 215
GVS GHLGG+ GI+
Sbjct: 164 ----GVSLWGHLGGLCTGII 179
>gi|317123235|ref|YP_004097347.1| rhomboid family protein [Intrasporangium calvum DSM 43043]
gi|315587323|gb|ADU46620.1| Rhomboid family protein [Intrasporangium calvum DSM 43043]
Length = 314
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 43/202 (21%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYK--------DLKRFFLSP 83
+P VT A++ +++L W +P + Y + RF +
Sbjct: 85 RPIVTQAIIGICVVVFL-------------VQWVSPGTTVDYAFAPSAGWIEPWRFVTAM 131
Query: 84 FYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL---AKSLV 138
F HA S H+ +N+ +L G LE MG AA+ + + G+ +++LL ++
Sbjct: 132 FLHAPRSLLHIGFNLYALFILGSYLEPLMGRARLAALYL-ISGIGGQVSVLLFAGNPTIE 190
Query: 139 LFFDYERAYYSEYAVGFSGVLFAM---KVVLNSR-SEDYTNVHGLLVPARYAAWAELI-- 192
F+ A ++ VG SG +F + +VLN ++G+L LI
Sbjct: 191 GLFNGTDAAWATPVVGASGAIFGLFGALIVLNRHLGRSAAGMYGVL----------LING 240
Query: 193 IIQMFVPGVSFLGHLGGILAGI 214
++ +P +S+ HLGG + G+
Sbjct: 241 VLGFVIPNISWQAHLGGFVTGL 262
>gi|417937077|ref|ZP_12580383.1| peptidase, S54 family [Streptococcus infantis X]
gi|343399519|gb|EGV12041.1| peptidase, S54 family [Streptococcus infantis X]
Length = 230
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 28/193 (14%)
Query: 34 PVTAALLATNTLIY----LRPAFLDSLVPSIHE--VWFNPHLILKYKDLKRFFLSPFYHA 87
PVT+ L TL++ L F + ++++ + P + + + R F + F H
Sbjct: 16 PVTSFFLLVTTLVFVLMFLTSGFNYTSAATLYKFGAVYPPAIKAMPEQIWRLFSATFVHI 75
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H NM+SL + G Q+E GS +F + L GM + +L+ + A
Sbjct: 76 GLQHFLVNMLSLYFLGRQMEQIFGSKQF-FFIYLLSGMMGNLFVLVFSPDAITAGASTAL 134
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQM----FVPGVS 202
Y +FA VVL S + Y G ++ L++I + +PG+S
Sbjct: 135 YG---------MFASIVVLRYASRNPYLQQLG-------QSYLSLLVINLVGSVLIPGIS 178
Query: 203 FLGHLGGILAGIL 215
GHLGG + G L
Sbjct: 179 LAGHLGGAVGGAL 191
>gi|308234864|ref|ZP_07665601.1| peptidase, S54 (rhomboid) family protein [Gardnerella vaginalis
ATCC 14018 = JCM 11026]
gi|311114036|ref|YP_003985257.1| rhomboid family protein [Gardnerella vaginalis ATCC 14019]
gi|310945530|gb|ADP38234.1| Rhomboid family protein [Gardnerella vaginalis ATCC 14019]
Length = 233
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYHA-SE 89
T +L+ ++L L + P++++V F+P LI K + +F S F H+
Sbjct: 21 TYSLIYICVFVWLVEIILHTFSPNLYQVLIENTAFSPFLI--KKSIWTWFTSMFVHSPGF 78
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
SH+F+NM+ L GI+LE G +F + A+ G+ + LL + + S
Sbjct: 79 SHIFFNMLCLYSLGIELEKFFGRWKF-FFLYAISGLGGCVATLLYCKIT-----GNWFLS 132
Query: 150 EYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAELII-IQMFVPGVSFLGHL 207
Y G SG + + +L ++ N G L+ W L + + + +P +++ H+
Sbjct: 133 AY--GASGAIMGLIGALLVAQWRLGENTRGTLI------WIALTLAMPIIIPNIAWQAHV 184
Query: 208 GGILAGILYLKLKG 221
GG++ G + L G
Sbjct: 185 GGLITGTILATLLG 198
>gi|146278360|ref|YP_001168519.1| rhomboid family protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556601|gb|ABP71214.1| Rhomboid family protein [Rhodobacter sphaeroides ATCC 17025]
Length = 246
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFN----PHLILKYKDLKRFFLSPFYHA 87
P VT AL+A N LI+L + ++ +FN P +L+ + F S F H
Sbjct: 13 TPYVTYALIAANVLIFLLMHYGAPSRLALEAAFFNWGLVPAELLQGTGYEGIFTSMFLHG 72
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
+HL NM+ L G LE MG FA +A
Sbjct: 73 GWAHLLGNMLFLYIYGDNLEDVMGHGRFAGFYLA 106
>gi|419710435|ref|ZP_14237901.1| rhomboid family protein [Mycobacterium abscessus M93]
gi|382941267|gb|EIC65587.1| rhomboid family protein [Mycobacterium abscessus M93]
Length = 247
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 29 ITWALIAVNVLVY-TATVSDGVDGDVTGSQLFRELVLYLPWVAEGELWRTVTTGFLHLGL 87
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 88 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 137
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 138 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 184
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 185 AGHMGGLLFGVL 196
>gi|357053297|ref|ZP_09114395.1| hypothetical protein HMPREF9467_01367 [Clostridium clostridioforme
2_1_49FAA]
gi|355385874|gb|EHG32920.1| hypothetical protein HMPREF9467_01367 [Clostridium clostridioforme
2_1_49FAA]
Length = 206
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSI----HEVWFNPHLILKYKDLKRFFLSPFYHA 87
+P V AL A N L++L + S + H F P +IL + R F + F H
Sbjct: 9 RPYVNIALAAVNALVFLYLEAIGSTEDGVFMVKHGAVFAPFVILG-GEYYRLFTAMFLHF 67
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITL 131
SHL NM+ LL G ++E ++G ++ +A + GI+L
Sbjct: 68 GVSHLANNMLVLLVLGEKMEKALGHIKYLIFYLASGVAANGISL 111
>gi|321252353|ref|XP_003192376.1| hypothetical protein CGB_B6280C [Cryptococcus gattii WM276]
gi|317458844|gb|ADV20589.1| Hypothetical Protein CGB_B6280C [Cryptococcus gattii WM276]
Length = 379
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFY 94
VT A++ + L + LD + P +H + F PH+ KY R PF A+ + L
Sbjct: 9 VTKAMMMLLGVSTLAASLLD-IKPYLH-LQFVPHMT-KYHQYWRILTHPFAFANSAELLM 65
Query: 95 NMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLF---FDYERAYYSEY 151
+ L G+ E + GS ++A+ ++ +S I+ +LA ++++ F + Y
Sbjct: 66 GEVLLYGTGVHTERAFGSRKYASFIL----ISSVISTILACAVIVLLHPFGIKSIPGGPY 121
Query: 152 AVGFSGVLFAMKVVLNSRSEDYT-NVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
V FS + ++V Y N+ G+ + ++ W + + + VP S L L G+
Sbjct: 122 GVIFSILWQRYRMV----PPLYQFNLFGIHISQKFFQWIFALHLMLSVPPSSILISLCGL 177
Query: 211 LAGILY 216
L+G +Y
Sbjct: 178 LSGYIY 183
>gi|427390838|ref|ZP_18885244.1| hypothetical protein HMPREF9233_00747 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732574|gb|EKU95382.1| hypothetical protein HMPREF9233_00747 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 221
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
Query: 27 HRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYH 86
R ++P T AL+A N +YL L ++ F P + RF S F H
Sbjct: 8 ERRAYRPWATVALIAINIGVYLVEMVWSGLSQALL---FAPGI--AEDQPYRFISSAFAH 62
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
+ HL +NM +L G+ LE ++G F M+ AL + + +LL S +
Sbjct: 63 SGFWHLIFNMYALWLMGMFLERAIGRWRF-VMLYALAAIGGNVFVLLTAS-----EDTMG 116
Query: 147 YYSEYAVGFSGVLFAM--KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG--VS 202
+++ VG SG +F + + + R +V L++ + ++ F+PG +S
Sbjct: 117 WWTG-VVGASGAVFGLFGALFVVQRHLGRNDVQLLVIIG-------INLVIGFMPGMNIS 168
Query: 203 FLGHLGGILAGILYLK 218
+ H+GG++ G + +
Sbjct: 169 WQSHVGGLIVGAILMA 184
>gi|415711175|ref|ZP_11463988.1| rhomboid family membrane protein [Gardnerella vaginalis 55152]
gi|388058486|gb|EIK81276.1| rhomboid family membrane protein [Gardnerella vaginalis 55152]
Length = 233
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYHA-SE 89
T +L+ ++L L + P++++V F+P LI K + +F S F H+
Sbjct: 21 TYSLIYICVFVWLVEIILHTFSPNLYQVLIENTAFSPFLI--KKSIWTWFTSMFVHSPGF 78
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
SH+F+NM+ L GI+LE G +F + A+ G+ + LL + + S
Sbjct: 79 SHIFFNMLCLYSLGIELEKFFGRWKF-FFLYAISGLGGCVATLLYCRIT-----GNWFLS 132
Query: 150 EYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAELII-IQMFVPGVSFLGHL 207
Y G SG + + +L ++ N G L+ W L + + + +P +++ H+
Sbjct: 133 AY--GASGAIMGLIGALLVAQWRLGENTRGTLI------WIALTLAMPIIIPNIAWQAHV 184
Query: 208 GGILAGILYLKLKG 221
GG++ G + L G
Sbjct: 185 GGLITGTILATLLG 198
>gi|385801006|ref|YP_005837409.1| peptidase, S54 family [Gardnerella vaginalis HMP9231]
gi|415703668|ref|ZP_11459419.1| rhomboid family membrane protein [Gardnerella vaginalis 284V]
gi|415706245|ref|ZP_11461319.1| rhomboid family membrane protein [Gardnerella vaginalis 0288E]
gi|333393280|gb|AEF31198.1| peptidase, S54 family [Gardnerella vaginalis HMP9231]
gi|388050974|gb|EIK73999.1| rhomboid family membrane protein [Gardnerella vaginalis 284V]
gi|388055137|gb|EIK78058.1| rhomboid family membrane protein [Gardnerella vaginalis 0288E]
Length = 233
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYHA-SE 89
T +L+ ++L L + P++++V F+P LI K + +F S F H+
Sbjct: 21 TYSLIYICVFVWLVEIILHTFSPNLYQVLIENTAFSPFLI--KKSIWTWFTSMFVHSPGF 78
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
SH+F+NM+ L GI+LE G +F + A+ G+ + LL + + S
Sbjct: 79 SHIFFNMLCLYSLGIELEKFFGRWKF-FFLYAISGLGGCVATLLYCRMT-----GNWFLS 132
Query: 150 EYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAELII-IQMFVPGVSFLGHL 207
Y G SG + + +L ++ N G L+ W L + + + +P +++ H+
Sbjct: 133 AY--GASGAIMGLIGALLVAQWRLGENTRGTLI------WIALTLAMPIIIPNIAWQAHV 184
Query: 208 GGILAGILYLKLKG 221
GG++ G + L G
Sbjct: 185 GGLITGTILATLLG 198
>gi|397690913|ref|YP_006528167.1| hypothetical protein MROS_1922 [Melioribacter roseus P3M]
gi|395812405|gb|AFN75154.1| Hypothetical protein MROS_1922 [Melioribacter roseus P3M]
Length = 306
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
+F F H S +H+ +NM L G+++ MG +F +A G+ G+ +L L
Sbjct: 80 QFITYQFMHGSFTHILFNMFMLWMFGMEIANLMGPRKFLIFYLA-CGIGAGLFQILLSPL 138
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
+ S +G SG +F + + D + L+P + ++++ F
Sbjct: 139 L-------GSVSAPTIGASGAVFGIMIAFAMFFPDRYILFYFLIPIKAKYLIAILVLFEF 191
Query: 198 VPG-----VSFLGHLGGILAGILYLKLKGGY 223
V V+ L H+GG + G L++ L Y
Sbjct: 192 VSVNEPTIVAHLAHIGGAVTGFLFIMLDRNY 222
>gi|440300205|gb|ELP92694.1| rhomboid protein, putative [Entamoeba invadens IP1]
Length = 248
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F F HA+ H+ N M+L G +E +G+ +F + + L + + +L A S+ L
Sbjct: 63 FTHSFVHANILHIVMNSMALFGFGCTVEYRIGTVKFIVLFIVSLVFNP-VFILSAASIGL 121
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
++ + VG SG LF + VV + + Y ++ + + II +F
Sbjct: 122 IYNTD-------VVGMSGFLFTLMVVEYYKEDGYIDI----IYSITINIVIYIIGILFQM 170
Query: 200 GVSFLGHLGGILAGILYLK 218
VS GH GIL G LY +
Sbjct: 171 PVSLAGHFSGILVGFLYTR 189
>gi|296087429|emb|CBI34018.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSR 298
IWRC CTFDN +S C++CG R
Sbjct: 48 IWRCSICTFDNDESMSACDICGVLR 72
>gi|306834822|ref|ZP_07467886.1| rhomboid family protein [Corynebacterium accolens ATCC 49726]
gi|304569350|gb|EFM44851.1| rhomboid family protein [Corynebacterium accolens ATCC 49726]
Length = 215
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 29/140 (20%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEF-AAMVVALLGMSQGITLLLAKSLVLF 140
S F H HL NM+ LL G ++E ++ + + AA +V+ LG A ++VL+
Sbjct: 63 SEFMHLDGGHLAVNMVMLLLIGREVERALDTGLYIAAYLVSCLG---------ASAMVLW 113
Query: 141 FDYERAYYSEYAVGFSGVLFAMKVVL----NSRSEDY-TNVHGLLVPARYAAWAELIIIQ 195
FD+ VG SG +FA+ +L R D + +LV Y AE
Sbjct: 114 FDF-----GTPTVGASGAIFALMGMLVGVFRQRGMDLRAPIVLVLVNVGYTFVAE----- 163
Query: 196 MFVPGVSFLGHLGGILAGIL 215
GVS GHLGG+ GI+
Sbjct: 164 ----GVSLWGHLGGLCTGII 179
>gi|365987714|ref|XP_003670688.1| hypothetical protein NDAI_0F01260 [Naumovozyma dairenensis CBS 421]
gi|343769459|emb|CCD25445.1| hypothetical protein NDAI_0F01260 [Naumovozyma dairenensis CBS 421]
Length = 277
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 5/187 (2%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVP--SIHEVW-FNPHLILKYKDLKRFFLSPFYHAS 88
P A L T ++L + S P +++E W N + K + P H S
Sbjct: 10 NPEYPPAALTTGLTVFLAIIYTLSWFPRTNLNESWSLNTDSLFHLKTFSKLSTYPLIHLS 69
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
HL N+ ++ ET+ G+ + +++ LL + G+ A + +L+ + A
Sbjct: 70 LLHLLCNVFAIFVPLTIFETNHGT-IYTGVILNLLAIFTGVFYCFAGT-ILYPNVSIAGA 127
Query: 149 SEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLG 208
S + F G + + R E++ ++ GL +P L +I VPG SF GH
Sbjct: 128 SGWCFTFWGYFALQESRIRPRYENFAHISGLNIPTVAVPIVMLFVIAFLVPGSSFPGHAL 187
Query: 209 GILAGIL 215
G++ G L
Sbjct: 188 GLMFGYL 194
>gi|421276262|ref|ZP_15727085.1| hypothetical protein SPAR10_0144 [Streptococcus mitis SPAR10]
gi|395878215|gb|EJG89282.1| hypothetical protein SPAR10_0144 [Streptococcus mitis SPAR10]
Length = 224
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 28/193 (14%)
Query: 34 PVTAALLATNTLIY----LRPAFLDSLVPSIHE--VWFNPHLILKYKDLKRFFLSPFYHA 87
PVT+ L TL++ L F + ++++ + P + + + R F + F H
Sbjct: 10 PVTSFFLLVTTLVFVLMFLTSGFNYTSAATLYKFGAVYPPAIKAMPEQIWRLFSATFVHI 69
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H NM+SL + G Q+E GS +F + L GM + +L+ + A
Sbjct: 70 GLEHFLVNMLSLYFLGRQMEDIFGSKQF-FFIYLLSGMMGNLFVLVFSPNAITAGASTAL 128
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQM----FVPGVS 202
Y +FA VVL S + Y G ++ L++I + +PG+S
Sbjct: 129 YG---------MFASIVVLRYASRNPYLQQLG-------QSYLSLLVINLVGSVLIPGIS 172
Query: 203 FLGHLGGILAGIL 215
GHLGG + G L
Sbjct: 173 LAGHLGGAVGGAL 185
>gi|398878884|ref|ZP_10633989.1| putative membrane protein [Pseudomonas sp. GM67]
gi|398198003|gb|EJM84971.1| putative membrane protein [Pseudomonas sp. GM67]
Length = 187
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
SPF HAS +HL N++ L G L G N F A+ I +LL +LV F
Sbjct: 50 SPFLHASFAHLSANLIPFLILG-TLVIVDGLNRFLAV--------SAIIILLGGALVWLF 100
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP-- 199
+ + +G SG +F + L SR+ + + G L+ A A ++ F+P
Sbjct: 101 GFSGVH-----IGASGWVFGLWAYLLSRAWFHRS-WGNLITASVVALLYGGLVFGFLPRQ 154
Query: 200 GVSFLGHLGGILAGILYLKL 219
GVSF GHL G LAG + K+
Sbjct: 155 GVSFEGHLFGALAGFIAAKV 174
>gi|418251560|ref|ZP_12877691.1| rhomboid family protein [Mycobacterium abscessus 47J26]
gi|420934166|ref|ZP_15397439.1| rhomboid family protein [Mycobacterium massiliense 1S-151-0930]
gi|420935691|ref|ZP_15398961.1| rhomboid family protein [Mycobacterium massiliense 1S-152-0914]
gi|420944426|ref|ZP_15407681.1| rhomboid family protein [Mycobacterium massiliense 1S-153-0915]
gi|420949678|ref|ZP_15412927.1| rhomboid family protein [Mycobacterium massiliense 1S-154-0310]
gi|420954531|ref|ZP_15417773.1| rhomboid family protein [Mycobacterium massiliense 2B-0626]
gi|420958705|ref|ZP_15421939.1| rhomboid family protein [Mycobacterium massiliense 2B-0107]
gi|420963609|ref|ZP_15426833.1| rhomboid family protein [Mycobacterium massiliense 2B-1231]
gi|420994639|ref|ZP_15457785.1| rhomboid family protein [Mycobacterium massiliense 2B-0307]
gi|420995600|ref|ZP_15458743.1| rhomboid family protein [Mycobacterium massiliense 2B-0912-R]
gi|421004948|ref|ZP_15468070.1| rhomboid family protein [Mycobacterium massiliense 2B-0912-S]
gi|353448717|gb|EHB97118.1| rhomboid family protein [Mycobacterium abscessus 47J26]
gi|392132578|gb|EIU58323.1| rhomboid family protein [Mycobacterium massiliense 1S-151-0930]
gi|392146032|gb|EIU71756.1| rhomboid family protein [Mycobacterium massiliense 1S-153-0915]
gi|392147198|gb|EIU72919.1| rhomboid family protein [Mycobacterium massiliense 1S-152-0914]
gi|392150719|gb|EIU76432.1| rhomboid family protein [Mycobacterium massiliense 1S-154-0310]
gi|392153444|gb|EIU79151.1| rhomboid family protein [Mycobacterium massiliense 2B-0626]
gi|392180741|gb|EIV06393.1| rhomboid family protein [Mycobacterium massiliense 2B-0307]
gi|392191420|gb|EIV17045.1| rhomboid family protein [Mycobacterium massiliense 2B-0912-R]
gi|392193651|gb|EIV19275.1| rhomboid family protein [Mycobacterium massiliense 2B-0912-S]
gi|392246522|gb|EIV71999.1| rhomboid family protein [Mycobacterium massiliense 2B-1231]
gi|392248431|gb|EIV73907.1| rhomboid family protein [Mycobacterium massiliense 2B-0107]
Length = 232
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 14 ITWALIAVNVLVY-TATVSDGVDGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 72
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFDYERAYY 148
H+ NM+SL G LE + G +AA+ ALLG S L ++V
Sbjct: 73 MHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVV---------- 122
Query: 149 SEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 123 ----AGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISL 169
Query: 204 LGHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 170 AGHMGGLLFGVL 181
>gi|238061764|ref|ZP_04606473.1| rhomboid family protein [Micromonospora sp. ATCC 39149]
gi|237883575|gb|EEP72403.1| rhomboid family protein [Micromonospora sp. ATCC 39149]
Length = 303
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + F H HL NM +L G LE ++G F A+ + + G + L
Sbjct: 141 RLVTAMFLHYGVVHLLLNMWALWVLGRSLEANLGPLRFLALYL-IAGFGGNVAAYL---- 195
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
F E A + + G+ A+ V+ D ++V +LV ++ +
Sbjct: 196 ---FSAENATTAGASTAIFGLFAALIVIERRMGRDISSVLPVLVIN--------LVFTLT 244
Query: 198 VPGVSFLGHLGGILAG 213
VPG+S GHLGG++ G
Sbjct: 245 VPGISIPGHLGGLVTG 260
>gi|398885013|ref|ZP_10639936.1| putative membrane protein [Pseudomonas sp. GM60]
gi|398193293|gb|EJM80403.1| putative membrane protein [Pseudomonas sp. GM60]
Length = 187
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
SPF HAS +HL N++ L G L G N F A+ I +LL +LV F
Sbjct: 50 SPFLHASFAHLSANLIPFLILG-TLVIVDGLNRFLAV--------SAIIILLGGALVWLF 100
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP-- 199
+ + +G SG +F + L SR+ + + G L+ A A ++ F+P
Sbjct: 101 GFSGVH-----IGASGWVFGLWAYLLSRAWFHRS-WGNLITASVVALLYGGLVFGFLPRQ 154
Query: 200 GVSFLGHLGGILAGILYLKL 219
GVSF GHL G LAG + K+
Sbjct: 155 GVSFEGHLFGALAGFIAAKV 174
>gi|383865777|ref|XP_003708349.1| PREDICTED: uncharacterized protein LOC100877493 [Megachile
rotundata]
Length = 617
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR-SGND 302
+ + A + W C CT+ NS ICEMCG SR GN+
Sbjct: 540 ENAKENASVGWNCATCTYLNSSSKEICEMCGKSRHKGNE 578
>gi|225465785|ref|XP_002268387.1| PREDICTED: HBS1-like protein-like [Vitis vinifera]
Length = 686
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSR 298
IWRC CTFDN +S C++CG R
Sbjct: 48 IWRCSICTFDNDESMSACDICGVLR 72
>gi|436833411|ref|YP_007318627.1| Rhomboid family protein [Fibrella aestuarina BUZ 2]
gi|384064824|emb|CCG98034.1| Rhomboid family protein [Fibrella aestuarina BUZ 2]
Length = 306
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H H+ +NM+ L W G +E +GS + + + + G+ +A +LV +F+
Sbjct: 77 FTHYDPFHILWNMVFLYWFGRLIEEYLGSRRLVGLYI-MGALGGGLCYFVAYNLVPYFNN 135
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLV-PARYAAWAELIIIQMFVPGV- 201
+ + +G SG ++ V + +YT H L + P R ++ F V
Sbjct: 136 QVG--GQVLLGASGAALSVAVGAATLLPNYT-FHLLFIGPVRIKYIVLFFVVLSFFNSVG 192
Query: 202 ----SFLGHLGGILAGILYLKLKGGYSGSD 227
L H+GG L G +Y+KL +GSD
Sbjct: 193 NNAGGNLAHIGGALVGFVYIKLLQ--NGSD 220
>gi|386841294|ref|YP_006246352.1| hypothetical protein SHJG_5211 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101595|gb|AEY90479.1| hypothetical protein SHJG_5211 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
Length = 281
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 40 LATNTLIYLRPAFLDSLVPSIHEVW----FNPHLILKYKDLKRFFLSPFYHASESHLFYN 95
LA + + LD LV ++ W F P + + RF S F H H+ +N
Sbjct: 80 LAVFIAVQADSSLLDHLV--LYGAWPPKPFAPTSGVAGGEWYRFVTSMFAHQEYWHIGFN 137
Query: 96 MMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG-ITLLLAKSLVLFFDYERAYYSEYAVG 154
M+SL W G LE ++G + A V + G++ G +T LL ++G
Sbjct: 138 MLSLWWIGGPLEAALGRARYLA-VYFVSGLAGGALTYLLTSP------------QTASLG 184
Query: 155 FSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
SG +F A V++ + D V LLV +I V +++ H+GG+
Sbjct: 185 ASGAIFGLFGATAVLMRRLNYDMRPVIALLVIN--------LIFTFGVGNIAWQAHIGGL 236
Query: 211 LAGIL 215
+AG++
Sbjct: 237 VAGVV 241
>gi|415713946|ref|ZP_11465326.1| rhomboid family membrane protein [Gardnerella vaginalis 1400E]
gi|388059304|gb|EIK82044.1| rhomboid family membrane protein [Gardnerella vaginalis 1400E]
Length = 233
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYHA-SE 89
T +L+ ++L L + P++++V F+P LI K + +F S F H+
Sbjct: 21 TYSLIYICVFVWLVEIILHTFSPNLYQVLIENTAFSPFLI--KKSIWTWFTSMFVHSPGF 78
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
SH+F+NM+ L GI+LE G +F + V + G+ + LL + + S
Sbjct: 79 SHIFFNMLCLYSLGIELEKFFGRWKFFFLYV-ISGLGGCVATLLYCRIT-----GNWFLS 132
Query: 150 EYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAELII-IQMFVPGVSFLGHL 207
Y G SG + + +L ++ N G L+ W L + + + +P +++ H+
Sbjct: 133 AY--GASGAIMGLIGALLVAQWRLGENTRGTLI------WIALTLAMPIIIPNIAWQAHV 184
Query: 208 GGILAGILYLKLKG 221
GG++ G + L G
Sbjct: 185 GGLITGTILATLLG 198
>gi|419714376|ref|ZP_14241793.1| rhomboid family protein [Mycobacterium abscessus M94]
gi|382945655|gb|EIC69948.1| rhomboid family protein [Mycobacterium abscessus M94]
Length = 247
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 33/191 (17%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYHASE 89
+T AL+A N L+Y D + + L+L +L R + F H
Sbjct: 29 ITWALIAVNVLVY-TATVSDGVDGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGL 87
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
H+ NM+SL G LE + G +AA+ G LL + + ++F +
Sbjct: 88 MHIAVNMLSLAMIGPGLERAFGGQRYAAI--------YGTALLGSSAAAMWFSP-----N 134
Query: 150 EYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
G SG ++ A+ + L R T + LL+ I + + +PG+S
Sbjct: 135 AVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLN---------IGLSISLPGISLA 185
Query: 205 GHLGGILAGIL 215
GH+GG+L G+L
Sbjct: 186 GHMGGLLFGVL 196
>gi|228469447|ref|ZP_04054455.1| rhomboid family protein [Porphyromonas uenonis 60-3]
gi|228309022|gb|EEK17665.1| rhomboid family protein [Porphyromonas uenonis 60-3]
Length = 240
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 20 LHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSL------VPSIHEVWFNPHLILKY 73
+H+F+ R+ PPVT LL N L YL L + + +H V H +
Sbjct: 1 MHSFDTNRRIQ-IPPVTLNLLIINVLCYLAQQVLPRVGIDLTGLLGLHYV--TAHDFHVW 57
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
+ + FL H S +HLF+NM +L G +E + G+ F L + G+T L
Sbjct: 58 QPISYMFL----HGSFTHLFFNMFALFMFGTTIERTWGAKRF-----LLFYLVCGLTAAL 108
Query: 134 AKSLV 138
++ LV
Sbjct: 109 SQELV 113
>gi|451794589|gb|AGF64638.1| hypothetical protein SHJGH_4975 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 295
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 40 LATNTLIYLRPAFLDSLVPSIHEVW----FNPHLILKYKDLKRFFLSPFYHASESHLFYN 95
LA + + LD LV ++ W F P + + RF S F H H+ +N
Sbjct: 94 LAVFIAVQADSSLLDHLV--LYGAWPPKPFAPTSGVAGGEWYRFVTSMFAHQEYWHIGFN 151
Query: 96 MMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG-ITLLLAKSLVLFFDYERAYYSEYAVG 154
M+SL W G LE ++G + A V + G++ G +T LL ++G
Sbjct: 152 MLSLWWIGGPLEAALGRARYLA-VYFVSGLAGGALTYLLTSP------------QTASLG 198
Query: 155 FSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGI 210
SG +F A V++ + D V LLV +I V +++ H+GG+
Sbjct: 199 ASGAIFGLFGATAVLMRRLNYDMRPVIALLVIN--------LIFTFGVGNIAWQAHIGGL 250
Query: 211 LAGIL 215
+AG++
Sbjct: 251 VAGVV 255
>gi|415704610|ref|ZP_11459881.1| rhomboid family membrane protein [Gardnerella vaginalis 75712]
gi|388051332|gb|EIK74356.1| rhomboid family membrane protein [Gardnerella vaginalis 75712]
Length = 233
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYHA-SE 89
T +L+ ++L L + P++++V F+P LI K + +F S F H+
Sbjct: 21 TYSLIYICVFVWLVEIILHTFSPNLYQVLIENTAFSPFLI--KKSIWTWFTSMFVHSPGF 78
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
SH+F+NM+ L GI+LE G +F + V + G+ + LL + + S
Sbjct: 79 SHIFFNMLCLYSLGIELEKFFGRWKFFFLYV-ISGLGGCVATLLYCRMT-----GNWFLS 132
Query: 150 EYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAELII-IQMFVPGVSFLGHL 207
Y G SG + + +L ++ N G L+ W L + + + +P +++ H+
Sbjct: 133 AY--GASGAIMGLIGALLVAQWRLGENTRGTLI------WIALTLAMPIIIPNIAWQAHV 184
Query: 208 GGILAGILYLKLKG 221
GG++ G + L G
Sbjct: 185 GGLITGTILATLLG 198
>gi|268317852|ref|YP_003291571.1| rhomboid family protein [Rhodothermus marinus DSM 4252]
gi|345304133|ref|YP_004826035.1| Rhomboid family protein [Rhodothermus marinus SG0.5JP17-172]
gi|262335386|gb|ACY49183.1| Rhomboid family protein [Rhodothermus marinus DSM 4252]
gi|345113366|gb|AEN74198.1| Rhomboid family protein [Rhodothermus marinus SG0.5JP17-172]
Length = 203
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 20/131 (15%)
Query: 58 PSIHEVW-FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA 116
PS+ + W F P IL+ ++ R + F H +HL +NM++L + G +E MG F
Sbjct: 27 PSLIDRWAFRPLHILRGREYHRMITAGFVHVGWAHLAFNMITLFFFGRPMEVLMGPVRFL 86
Query: 117 AMVVA--LLGMSQGITLL-----------------LAKSLVLFFDYERAYYSEYAVGFSG 157
+ L G + L L LFF ++R Y + VG
Sbjct: 87 LIYFGAELAGHGLSLWLHRNRPTYAAVGASGAISGLLFGYCLFFPFDRIYLFFFPVGIPA 146
Query: 158 VLFAMKVVLNS 168
VLFA+ V+ S
Sbjct: 147 VLFAIGYVVLS 157
>gi|268315851|ref|YP_003289570.1| rhomboid family protein [Rhodothermus marinus DSM 4252]
gi|262333385|gb|ACY47182.1| Rhomboid family protein [Rhodothermus marinus DSM 4252]
Length = 220
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEV---WFN------PHLILKYKDLKRFFLSP 83
PPV LL N L+ FL LVP+ + WF P + + S
Sbjct: 18 PPVVKNLLILNGLV-----FLAQLVPTTDRLLIEWFALWPLGLPDFYPGFWPWQLITYS- 71
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H +HLF+NM +L G+ +E + GS F + + G+T LL +L
Sbjct: 72 FLHGGFAHLFFNMFALWMFGVPIERAWGSRRFGVYYFVCV-VGAGLTQLLVVTL------ 124
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR----------YAAWAELII 193
A Y VG SG +F + + + L P + WA +
Sbjct: 125 SGAVYP--TVGASGGVFGILLAFGMMFPNTPIYLYFLFPIKAKWLVIGYGLLELWAGVTG 182
Query: 194 IQMFVPGVSFLGHLGGILAGILYLK 218
Q GV+ HLGG+L G L ++
Sbjct: 183 TQ---SGVAHFAHLGGMLFGFLLIQ 204
>gi|449437072|ref|XP_004136316.1| PREDICTED: HBS1-like protein-like [Cucumis sativus]
Length = 683
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 15/53 (28%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIER 326
+WRC CT+DN S+C++CG R IPL+ R+ + +R
Sbjct: 48 LWRCSICTYDNEDSFSVCDICGVLR---------------IPLDNNRNTQDDR 85
>gi|320095206|ref|ZP_08026910.1| rhomboid family protein [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977858|gb|EFW09497.1| rhomboid family protein [Actinomyces sp. oral taxon 178 str. F0338]
Length = 293
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
S F H+ H+F+NM++L W G +E ++G + A V L+ G L++ L F
Sbjct: 122 SAFLHSGFLHVFFNMLTLYWVGSVVERAIGHWRYGA--VCLISALGGSALVM---LWCFV 176
Query: 142 DYERAYYSEYAVGFSGV---LFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV 198
E + + VG SG LF VL S T +L+ ++
Sbjct: 177 QPEALFAAT--VGASGAVFGLFGAVFVLQRLSGSSTAPILILLGVN-------LVYGFAN 227
Query: 199 PGVSFLGHLGGILAG 213
PGVS+ H+GG LAG
Sbjct: 228 PGVSWQAHIGGFLAG 242
>gi|348506836|ref|XP_003440963.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Oreochromis niloticus]
Length = 1148
Score = 41.2 bits (95), Expect = 0.65, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSRSGNDLSSD 306
+W C ACT+ NS L CEMC RS + +SS+
Sbjct: 637 VWDCGACTYSNSSLLPYCEMCECPRSTSAVSSE 669
>gi|300123463|emb|CBK24735.2| Peptidase S54 [Blastocystis hominis]
Length = 398
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 28/126 (22%)
Query: 149 SEYAVGFSGVLFAM--KVVLNSRSEDYTNVHGLLVPA-----------------RYAAWA 189
S + +G+S VLFA+ ++L ++ N++G+ P +
Sbjct: 214 SVWGLGYSCVLFALMTTIILKGDTQCPVNLYGMCFPTYEFKLLPFPSTCTGIRINLYPFV 273
Query: 190 ELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARY 249
L+++++ VP SF GHL GIL GI+ S L +I+ T +S L + Y
Sbjct: 274 LLVVMKLIVPISSFFGHLAGILVGIVI---------STDLLSILSPVTCCVSVELLYFAY 324
Query: 250 LFRRPR 255
F R +
Sbjct: 325 HFYREK 330
>gi|387139692|ref|YP_005695670.1| rhomboid family protein [Corynebacterium pseudotuberculosis 1/06-A]
gi|355391483|gb|AER68148.1| Rhomboid family protein [Corynebacterium pseudotuberculosis 1/06-A]
Length = 256
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFL-DSLVPSIHEVWFNPHLILKYKDLK------RFFLSPF 84
+ PVTA L + +I+L AF S+ ++++ W H IL ++ R S F
Sbjct: 20 QAPVTALLSLSTLIIFLITAFQSQSITDNLYDSWIGTHWILYTPEMHEPLGMLRAIGSMF 79
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H HL N+ L + G ++E +GS F A + I+ L A +++ D
Sbjct: 80 LHIGPGHLAINIFLLFFLGREIEQCIGSALFCA--------AYFISGLGASLMIMIMDPL 131
Query: 145 RAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ M +++ T++ L+ LI VS
Sbjct: 132 SP-----TAGASGAIYGLMAIMVAIAITRKTDIRAPLILVAVNVGYSLI-----ADNVSL 181
Query: 204 LGHLGGILAG 213
GH+GG++AG
Sbjct: 182 WGHIGGLVAG 191
>gi|120406695|ref|YP_956524.1| rhomboid family protein [Mycobacterium vanbaalenii PYR-1]
gi|119959513|gb|ABM16518.1| Rhomboid family protein [Mycobacterium vanbaalenii PYR-1]
Length = 290
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLL 133
+L R S F H S +H+ +NM++L + G LE ++G F A+ + + LG S + LL
Sbjct: 116 ELYRLLTSAFLHFSVTHIAFNMLALYFVGAPLEFALGRLRFVALYLFSALGGSVLVYLLT 175
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
F+ A S G G F + LN + GL A +
Sbjct: 176 -------FNALTAGASGAVFGLFGATFVVGKRLNMDVRSVVMIIGL-------NLAFTFL 221
Query: 194 IQMFVP-GVSFLGHLGGILAG 213
I +F +S+ GH+GG++ G
Sbjct: 222 IPLFTSQNISWQGHIGGLVTG 242
>gi|317419285|emb|CBN81322.1| Calpain-15 [Dicentrarchus labrax]
Length = 1154
Score = 41.2 bits (95), Expect = 0.66, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRSGNDL 303
W+CP+C+ N G S CE C +SR+G DL
Sbjct: 329 WKCPSCSLPNPGNSSKCEACRSSRAGADL 357
>gi|397566569|gb|EJK45095.1| hypothetical protein THAOC_36308 [Thalassiosira oceanica]
Length = 533
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 48 LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLE 107
L P FLD+ +H+ + L + R+ S F H S H+ NM +L+ LE
Sbjct: 296 LGPFFLDN----VHQPY-----PLSHVQRHRYISSSFLHGSLVHIVMNMRALVSLPSWLE 346
Query: 108 TSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLN 167
+G + A + S I+ +A +LV + A S +G SG + + ++
Sbjct: 347 NGIGKGVYLASYI-----SGVISGNVASTLVNVGNVSAA--STLCLGCSGGICGLYGLMM 399
Query: 168 SRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILYLKLKG-GYSGS 226
+ N + W L++ + +PG+S GH+GG + G L L G GY S
Sbjct: 400 ASLMKMGNPDAAWYVLKSMIW--LVMFGLIIPGISNAGHVGGFIGGWLVGYLFGPGYERS 457
Query: 227 DPLTTIIRGATGVLSWPLRFA 247
T+ R + SW R A
Sbjct: 458 ---YTLGRSKSDTASWDFRRA 475
>gi|400293315|ref|ZP_10795191.1| peptidase, S54 family [Actinomyces naeslundii str. Howell 279]
gi|399901556|gb|EJN84435.1| peptidase, S54 family [Actinomyces naeslundii str. Howell 279]
Length = 285
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
RF + F HA+ HL +NM +L G LE +G F A+ +++ LG S I L
Sbjct: 120 RFLTTAFLHANYMHLGFNMWALWVLGGALEPVLGRWRFTAVYLLSALGGSTAIYWLSWP- 178
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFA----MKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
E ++ VG SG +F M VV D + + LLV
Sbjct: 179 -------ETEAWTTLTVGASGAVFGLFSTMFVVQRRFGRDTSGIVALLVING-------- 223
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
++ +S+ GHLGG++ G
Sbjct: 224 VVSFLGANISWQGHLGGLIVG 244
>gi|452822089|gb|EME29112.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 196
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLF 93
PVT ++A +++L + S ++V N ++ K+ R+ S H S HL
Sbjct: 19 PVTCLVIAICIIVWLVITYKG---WSYYDVGCNYDCVIVDKETWRWISSTLSHISLMHLI 75
Query: 94 YNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAV 153
NM S LW +E +GS + V + +S +TL + + F E+ + Y V
Sbjct: 76 LNMYS-LWNLSWMEQRLGSLVYLTWNVVIAFLSTCVTLFINYLQLTVFHSEQVRHV-YLV 133
Query: 154 GFSGVLFAMKVV 165
G+S VLF + V+
Sbjct: 134 GYSAVLFGLFVI 145
>gi|345302141|ref|YP_004824043.1| Rhomboid family protein [Rhodothermus marinus SG0.5JP17-172]
gi|345111374|gb|AEN72206.1| Rhomboid family protein [Rhodothermus marinus SG0.5JP17-172]
Length = 220
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEV---WFN------PHLILKYKDLKRFFLSP 83
PPV LL N L+ FL LVP+ + WF P + + S
Sbjct: 18 PPVVKNLLILNGLV-----FLAQLVPTTDRLLIEWFALWPLGLPDFYPGFWPWQLITYS- 71
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H +HLF+NM +L G+ +E + GS F + + G+T LL +L
Sbjct: 72 FLHGGFAHLFFNMFALWMFGVPIERAWGSRRFGVYYFVCV-VGAGLTQLLVVTL------ 124
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR----------YAAWAELII 193
A Y VG SG +F + + + L P + WA +
Sbjct: 125 SGAVYP--TVGASGGVFGILLAFGMMFPNTPIYLYFLFPIKAKWLVIGYGLLELWAGVTG 182
Query: 194 IQMFVPGVSFLGHLGGILAGILYLK 218
Q GV+ HLGG+L G L ++
Sbjct: 183 TQ---SGVAHFAHLGGMLFGFLLIQ 204
>gi|160935902|ref|ZP_02083276.1| hypothetical protein CLOBOL_00795 [Clostridium bolteae ATCC
BAA-613]
gi|158441144|gb|EDP18861.1| hypothetical protein CLOBOL_00795 [Clostridium bolteae ATCC
BAA-613]
Length = 206
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSI----HEVWFNPHLILKYKDLKRFFLSPFYHA 87
+P V AL A N L++L + S + H F P +IL + R F + F H
Sbjct: 9 RPYVNIALAAVNVLVFLYLEAIGSTEDGVFMVKHGAVFAPFVILG-GEYYRLFTAMFLHF 67
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEF 115
SHL NM+ LL G ++E ++G ++
Sbjct: 68 GVSHLANNMLVLLVLGEKMERALGHIKY 95
>gi|305662826|ref|YP_003859114.1| rhomboid family protein [Ignisphaera aggregans DSM 17230]
gi|304377395|gb|ADM27234.1| Rhomboid family protein [Ignisphaera aggregans DSM 17230]
Length = 452
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYH 86
+P T L+ATN +Y+ ++ + + I + W F P ++ + R F S F H
Sbjct: 11 RPIATYILIATNIAVYIISSY-QNFLTQISDDWVTRYAFVPIMLQEPMQWYRIFTSMFLH 69
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
H+F+NM L G ++E S+G + A+
Sbjct: 70 GDILHIFFNMWFLYMFGKEVELSLGITRYLAI 101
>gi|380510776|ref|ZP_09854183.1| hypothetical protein XsacN4_06161 [Xanthomonas sacchari NCPPB 4393]
Length = 218
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW----FNPHLILKYKDLKRFFLSPF 84
P PPVT ALL N +++L S +W F+ + L + F
Sbjct: 2 FPRLPPVTQALLIGNVVVFLLQMLFGMDTFSPFMLWPIGAFDAFSPGENFQLWQLLTYGF 61
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAA-MVVALLGMSQGITLLLAKSLVLFFDY 143
H S SHL +NM++L G LE + G+ F +V ++G L + LV ++
Sbjct: 62 LHGSFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVVGAG------LCQLLVGWWML 115
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP-----AR-----YAAWAELII 193
+G SG +F + + + V LL P AR + A L+
Sbjct: 116 SNGNAPYPTLGASGGIFGLLLAFGMLFPNQRVV--LLFPPIPMKARTFVIVFGALELLMG 173
Query: 194 IQMFVPGVSFLGHLGGILAGILYLK 218
+ PGV+ HLGG+L G L ++
Sbjct: 174 FTGWQPGVAHFAHLGGMLFGWLMIR 198
>gi|297595974|ref|NP_001041845.2| Os01g0116600 [Oryza sativa Japonica Group]
gi|53791458|dbj|BAD52510.1| putative translation elongation factor eEF-1 [Oryza sativa Japonica
Group]
gi|215706904|dbj|BAG93364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672805|dbj|BAF03759.2| Os01g0116600 [Oryza sativa Japonica Group]
Length = 655
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 272 PIIWRCPACTFDNSGWLSICEMCGTSR 298
P++WRC C FDN + CEMCG R
Sbjct: 56 PVLWRCSMCMFDNHESMVYCEMCGVFR 82
>gi|325916919|ref|ZP_08179164.1| uncharacterized membrane protein [Xanthomonas vesicatoria ATCC
35937]
gi|325536865|gb|EGD08616.1| uncharacterized membrane protein [Xanthomonas vesicatoria ATCC
35937]
Length = 255
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 51/228 (22%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSL----VPSIHEV-----W--------------F 65
+P PPVT ALL N ++L L L +PS + W F
Sbjct: 23 MPQLPPVTKALLIANIGLFLLQWALGDLGAGVLPSDSTLSWLMLWPISNGFDAFSPGASF 82
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
P +L Y F H +HLF+NM++L G LE + G F + +
Sbjct: 83 MPWQLLTYA---------FLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAG 133
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
+ LL+A +F + A + G G+L A ++ ++ V L P
Sbjct: 134 AGLCQLLMA-----WFTHSGAPVVGASGGVFGLLLAYGMLFPNQ-----RVMLLFPPIPM 183
Query: 186 AAWAELII---IQMFV------PGVSFLGHLGGILAGILYLKLKGGYS 224
A +I+ I++F+ PGV+ HLGG+L G L ++ G S
Sbjct: 184 KARTFVIVFGAIELFLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQS 231
>gi|315446599|ref|YP_004079478.1| hypothetical protein Mspyr1_51170 [Mycobacterium gilvum Spyr1]
gi|315264902|gb|ADU01644.1| uncharacterized membrane protein [Mycobacterium gilvum Spyr1]
Length = 279
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
P VT AL+ N L + L P + + + ++ R S F H +H
Sbjct: 66 TPVVTYALIGINLLAFA----LQMASPGLQRAFGLWSPAVADGEMYRLLTSAFLHFGLTH 121
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
L +NM++L + G LE ++G F + +V+ LG S + LL F+ A S
Sbjct: 122 LAFNMLALYFVGPPLEAALGRARFVTLYLVSALGGSVLVYLLT-------FNALTAGASG 174
Query: 151 YAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP-GVSFLGHLGG 209
G G F + LN D +V ++V A +I +F +S+ GH+GG
Sbjct: 175 AVFGLFGATFVVGRKLN---MDVRSVMAIIV----LNLAFTFLIPLFTSQNISWQGHIGG 227
Query: 210 ILAGIL 215
++ G L
Sbjct: 228 LVTGAL 233
>gi|296242184|ref|YP_003649671.1| rhomboid family protein [Thermosphaera aggregans DSM 11486]
gi|296094768|gb|ADG90719.1| Rhomboid family protein [Thermosphaera aggregans DSM 11486]
Length = 447
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 83/212 (39%), Gaps = 47/212 (22%)
Query: 32 KPPVTAALLATNTLIYLRPA----FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
+P VT L+ N +Y + FL + I+ FNP + + +KR F S F HA
Sbjct: 15 RPVVTVLLVLANLAVYFYTSRARSFLQTDPYFIYTYGFNPLFLSTLEGVKRVFTSMFIHA 74
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFA------------------------AMVVALL 123
H+ +NM+ L G +E GS F A+V+ +
Sbjct: 75 DLFHIVFNMLFLYLFGKSVEAVTGSLRFLLLYLAGGLGAVLFHVALIPIGGYEALVIPAV 134
Query: 124 GMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPA 183
G S I+ +L +LF V F + + L S Y LL+
Sbjct: 135 GASGAISAVLGAFFILF--------PHTRVSLCMFFFFLPICLPLPSSIY-----LLI-- 179
Query: 184 RYAAWAELIII-QMFVPGVSFLGHLGGILAGI 214
+AE +I + + GV++ H GG +AG+
Sbjct: 180 ---WFAEQVIYGYLNLGGVAYFAHAGGFIAGM 208
>gi|170090562|ref|XP_001876503.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647996|gb|EDR12239.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 317
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 117/288 (40%), Gaps = 29/288 (10%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFY 94
VT AL+A + L + D V + F PH I ++ R F+ ++ S LF
Sbjct: 8 VTKALIAGSALTSILAGMFD--VKHYFHIQFVPH-ISRHHQYWRLFVHHLAFSNSSDLFL 64
Query: 95 NMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVG 154
++ L G+Q+E GS +FA+ + + +S TLL SL+LF R + ++G
Sbjct: 65 GVVILYNVGVQIERQFGSVKFASFALVSIMVS---TLLELVSLMLF---HRVGLNFMSLG 118
Query: 155 FSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV---PGVSFLGHLGGIL 211
S ++F++ + N +P + ++ +QM + PG + + + GIL
Sbjct: 119 PSALIFSILYQYSRIVPPVYNYRIFGIPLSNKSLNYVLALQMAISRLPGSAAVAII-GIL 177
Query: 212 AGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGTVGGSDTRRTA 271
G LY G+ ++R +T L PL + R PR R G+ T
Sbjct: 178 TGQLYRSDLAGFKSYRIPPYVVRFSTNYL-LPLIGS---LRAPRRSNRALPDGATTLE-- 231
Query: 272 PIIWRCPACTFDNSGWLSICEMCGTSRSG--NDLSSDQLSRHSNIPLE 317
F N ++ S SG N S D + + + E
Sbjct: 232 --------VPFQNEEVITTARTPAASPSGTRNITSPDNAASNPTVMQE 271
>gi|356512557|ref|XP_003524985.1| PREDICTED: HBS1-like protein-like [Glycine max]
Length = 793
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 264 GSDTRRTA--PIIWRCPACTFDNSGWLSICEMCGTSR 298
G DT++ P +W+C CT+DN ++ C++CG R
Sbjct: 36 GPDTKQETIKPGLWQCSICTYDNDESMTFCDICGVVR 72
>gi|404443258|ref|ZP_11008430.1| rhomboid family protein [Mycobacterium vaccae ATCC 25954]
gi|403655930|gb|EJZ10759.1| rhomboid family protein [Mycobacterium vaccae ATCC 25954]
Length = 289
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLL 133
+L R S F H S +H+ +NM++L + G LE ++G F A+ +++ LG S + LL
Sbjct: 115 ELYRLVTSAFLHFSVTHIAFNMLALYFVGPPLEHALGRLRFVALYLLSALGGSVLVYLLT 174
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
F+ A S G G F + LN + GL A +
Sbjct: 175 -------FNALTAGASGAVFGLFGATFVVGRKLNMDVRSVLAIIGL-------NLAFTFL 220
Query: 194 IQMFVP-GVSFLGHLGGILAG 213
I +F +S+ GH+GG++ G
Sbjct: 221 IPLFTSQNISWQGHIGGLVTG 241
>gi|237784673|ref|YP_002905378.1| hypothetical protein ckrop_0036 [Corynebacterium kroppenstedtii DSM
44385]
gi|237757585|gb|ACR16835.1| putative membrane protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 278
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 35/197 (17%)
Query: 32 KPPVTAALLATNTLIYLRPAFLD-SLVPSIHEV------W-FNPHLILKYKDLKRFFLSP 83
+ PVT+ L ++YL SL + HE W + P L + L R
Sbjct: 8 QTPVTSGALIACIVVYLVTVVQSGSLDGNTHESSLAASWWLYLPALTPDNEALLRGLTFS 67
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H+ +HL +N + L G+ +E + GS AM + G S G + +++ + D
Sbjct: 68 FLHSGLTHLLFNGVMLWVFGVGIERTYGS---LAMAIIFAGTSYG-----SAAMIQWRDP 119
Query: 144 ERAYYSEYAVGFSGVLFAMKVV-----LNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV 198
VG SGV++ + V LN++ + + ++V Y+ +
Sbjct: 120 L-----SLTVGASGVIYGLMAVAAGMYLNNKPQMRALIVLIVVNLGYS---------LIT 165
Query: 199 PGVSFLGHLGGILAGIL 215
PG+S GH+GG+L G L
Sbjct: 166 PGISLWGHIGGLLTGAL 182
>gi|222617633|gb|EEE53765.1| hypothetical protein OsJ_00145 [Oryza sativa Japonica Group]
Length = 707
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 272 PIIWRCPACTFDNSGWLSICEMCGTSR 298
P++WRC C FDN + CEMCG R
Sbjct: 108 PVLWRCSMCMFDNHESMVYCEMCGVFR 134
>gi|184155757|ref|YP_001844097.1| hypothetical protein LAF_1281 [Lactobacillus fermentum IFO 3956]
gi|260663527|ref|ZP_05864417.1| rhomboid family protein [Lactobacillus fermentum 28-3-CHN]
gi|183227101|dbj|BAG27617.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|260552068|gb|EEX25121.1| rhomboid family protein [Lactobacillus fermentum 28-3-CHN]
Length = 221
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 21/196 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPS--IHEVWFNPHLILKYKDLKRFFLSPFYHASE 89
+ P+T L+ L+YL S + + N ++ R F + F H
Sbjct: 7 QAPLTCCLVGVCVLVYLLEELAGGATNSATLLNLGANYGPFVRAGQWWRVFTAAFLHIGL 66
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
+HLF NMM L + G +E G A + + + M +++ + + +
Sbjct: 67 THLFLNMMVLYYLGRTIEELTGHLRMAVIYLVSILMGNLVSVAVQPVTI---------SA 117
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM----FVPGVSFLG 205
+ G G LF + + S Y + GL AR + L+II + PG+ G
Sbjct: 118 GASTGIFG-LFGAFLFMGSEFRQYPALRGL---AR--QYLILVIINLVYDLIAPGIDIFG 171
Query: 206 HLGGILAGILYLKLKG 221
HLGG++ G L L G
Sbjct: 172 HLGGLVGGFLACALVG 187
>gi|444429847|ref|ZP_21225028.1| rhomboid family protein [Gordonia soli NBRC 108243]
gi|443889267|dbj|GAC66749.1| rhomboid family protein [Gordonia soli NBRC 108243]
Length = 268
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R F S F H S H+ NM++L G LE ++G + A+ V +L +
Sbjct: 90 RLFTSGFLHLSVIHIAGNMLALYILGRDLELALGIPRYVAVYVT--------SLFGGSAF 141
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL-IIIQM 196
V+ F+ + A + + G++ A+ VVL + L P + L I++ +
Sbjct: 142 VMLFESDTAVTAGASGAIYGLMGAILVVL---------LKARLSPVPVLSIIGLNIVLSI 192
Query: 197 FVPGVSFLGHLGGILAG 213
+PG+S H+GG++ G
Sbjct: 193 AIPGISIWAHIGGLVFG 209
>gi|377574619|ref|ZP_09803641.1| rhomboid family protein [Mobilicoccus pelagius NBRC 104925]
gi|377536616|dbj|GAB48806.1| rhomboid family protein [Mobilicoccus pelagius NBRC 104925]
Length = 354
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 78 RFFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLA 134
RF + F H+ +S HL +NMMSL G LE ++G + A+ +++ LG S G LLLA
Sbjct: 165 RFLTAAFLHSPDSISHLLFNMMSLYAMGQFLEPALGRARYTALYLLSALGGSVGC-LLLA 223
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAM 162
L + + VG SG +F +
Sbjct: 224 PHLDAVDQASVMAWFQGMVGASGAVFGL 251
>gi|452206496|ref|YP_007486618.1| rhomboid family protein [Natronomonas moolapensis 8.8.11]
gi|452082596|emb|CCQ35857.1| rhomboid family protein [Natronomonas moolapensis 8.8.11]
Length = 326
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 81 LSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA---LLGMSQ-GITLLLAKS 136
+S F H SHL +N ++L + G +E +GS +FAA+ +A L G+ Q G+ L+ +
Sbjct: 158 VSVFSHGGPSHLLFNAIALYFFGPIVERQVGSRKFAALFLASGVLAGLGQVGVGLVTGEQ 217
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR-------YAAWA 189
+ + +G SG L A+ VL S D + +P +AA++
Sbjct: 218 VAV-------------LGASGALMAIMGVLAVTSPDLKVLLFFFIPMSIRTLTVLFAAFS 264
Query: 190 ELIIIQ--MFVPGVSFLGHLGGILAGILY 216
+ + GV+ HL G++ G+ Y
Sbjct: 265 IFAFVADGGILSGVAHFAHLVGLVIGLWY 293
>gi|398999048|ref|ZP_10701801.1| putative membrane protein [Pseudomonas sp. GM18]
gi|398132667|gb|EJM21929.1| putative membrane protein [Pseudomonas sp. GM18]
Length = 187
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 23/143 (16%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
SPF H S +HL N+++ L G L G N F A+ I +LL SL+ F
Sbjct: 50 SPFLHTSFAHLSANLIAFLILG-TLVIVEGLNRFMAV--------SAIIILLGGSLIWLF 100
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRS---EDYTNVHGLLVPARYAAWAELIIIQMFV 198
+ + +G SG +F + L SR+ ++N L+ A A +I F+
Sbjct: 101 GFAGVH-----IGASGWVFGLWAYLLSRAWFQRSWSN----LITASVVALLYGGLIVGFL 151
Query: 199 P--GVSFLGHLGGILAGILYLKL 219
P G+SF GH+ G +AG + K+
Sbjct: 152 PRRGISFEGHIFGAIAGFIAAKV 174
>gi|326504866|dbj|BAK06724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 418
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 87/219 (39%), Gaps = 48/219 (21%)
Query: 16 PLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKD 75
P L +AF Y P P +A LL A V HE W
Sbjct: 117 PDLGRYAFQPYKENPLVGPTSATLLQMG-------ALETGKVAKDHEWW----------- 158
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R + HA H+ NM+SLL GI+LE EF + + L + G+ L
Sbjct: 159 --RLITCIWLHAGVIHILANMLSLLMIGIRLE-----KEFGFLRIGTLYVISGVGGSLLS 211
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQ 195
+L + S +VG SG LF + + + SE TN + + AA L++I
Sbjct: 212 ALFMV--------SNISVGASGALFGL--LGSMLSELITN--WTIYENKCAALLTLVMII 259
Query: 196 M------FVPGVSFLGHLGGILAG-----ILYLKLKGGY 223
+ +P V H+GG ++G +L ++ + GY
Sbjct: 260 VINLAVGILPHVDNFAHIGGFVSGFFLGFVLLMRPQFGY 298
>gi|255326467|ref|ZP_05367549.1| rhomboid family protein [Rothia mucilaginosa ATCC 25296]
gi|255296507|gb|EET75842.1| rhomboid family protein [Rothia mucilaginosa ATCC 25296]
Length = 270
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 71 LKYKDLKRFFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG 128
+ + + R F H+ H+ +NM+ L G+ LE MG +F + +A
Sbjct: 109 VHHGEYYRLITHGFVHSQNDPMHMVWNMIYLFIFGVSLERMMGRWKFLFVYMA------- 161
Query: 129 ITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMK-----VVLNSRSEDYTNVHGLLVPA 183
L A V FDY R AVG SG ++ + ++L R +D + LL+
Sbjct: 162 -ATLGAGLSVYLFDYYRG-----AVGASGGVYGLYGAFFVILLLRRQKDTARLFMLLIGI 215
Query: 184 RYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
++ +F P +S GH GG+++G L
Sbjct: 216 G-------VVQSLFHPNISHAGHFGGLVSGAL 240
>gi|387895854|ref|YP_006326151.1| peptidase, S54 (rhomboid) family [Pseudomonas fluorescens A506]
gi|423693791|ref|ZP_17668311.1| peptidase, S54 (rhomboid) family [Pseudomonas fluorescens SS101]
gi|387164522|gb|AFJ59721.1| peptidase, S54 (rhomboid) family [Pseudomonas fluorescens A506]
gi|388001551|gb|EIK62880.1| peptidase, S54 (rhomboid) family [Pseudomonas fluorescens SS101]
Length = 186
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
SPF HAS +HL N+++ L G L G + F A+ I ++L +LV F
Sbjct: 50 SPFLHASFAHLSANLIAFLVLG-TLVILDGLHRFIAV--------SAIVIVLGGALVWLF 100
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP-- 199
+ + VG SG +F + L SR+ + + LL A A +I+ F+P
Sbjct: 101 GFAGVH-----VGASGWVFGLWAYLLSRAWFHRSWSNLLTAAVVALLYGGLIVG-FLPRQ 154
Query: 200 GVSFLGHLGGILAGILYLKL 219
G+SF GHL G LAG + K+
Sbjct: 155 GISFEGHLFGALAGFIAAKV 174
>gi|449519476|ref|XP_004166761.1| PREDICTED: LOW QUALITY PROTEIN: HBS1-like protein-like [Cucumis
sativus]
Length = 618
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 15/53 (28%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIER 326
+WRC CT+DN S+C++CG R IPL+ R+ + +R
Sbjct: 48 LWRCSICTYDNEDSFSVCDICGVLR---------------IPLDNNRNTQDDR 85
>gi|363736001|ref|XP_003641641.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Gallus gallus]
Length = 1093
Score = 40.8 bits (94), Expect = 0.88, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRSGN 301
W C CT+ N+ WL CEMC +S N
Sbjct: 634 WHCSVCTYSNNKWLPYCEMCNCPQSNN 660
>gi|47225952|emb|CAG04326.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1345
Score = 40.8 bits (94), Expect = 0.89, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRSGNDL 303
W+CP+C+ N G S CE C +SR+G DL
Sbjct: 548 WKCPSCSLPNPGSSSKCEGCRSSRAGADL 576
>gi|427439986|ref|ZP_18924515.1| rhomboid family integral membrane protein [Pediococcus lolii NGRI
0510Q]
gi|425787818|dbj|GAC45303.1| rhomboid family integral membrane protein [Pediococcus lolii NGRI
0510Q]
Length = 229
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 33 PPVTAALLATNTLIYL----RPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
P VT L+A N L+YL D V H P +I F S F H
Sbjct: 15 PFVTITLVALNVLVYLWLTLAGGSTDLTVLVTHGAMV-PAMIKDGAGWASLFTSMFVHIG 73
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
HL +NM++L + G LE +G F +++ LL GI A + L F A
Sbjct: 74 FEHLLFNMITLYFIGRLLEQVIGHGRF--LLIYLL---SGI---FANVVSLAF----AAP 121
Query: 149 SEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR----YAAWAELIIIQMFVPGVSFL 204
+ + G SG +F + V +E Y N L R ++A I+ MF +
Sbjct: 122 NSISAGASGAIFGIIGVWIMMAEQYRNYPFLAGMGRQMLIFSALG--IVSGMFGTNIDIF 179
Query: 205 GHLGGILAGILYLKLKGGYSGSDP 228
HLGG++AG L GY S P
Sbjct: 180 AHLGGLVAGFLL-----GYGFSFP 198
>gi|195652545|gb|ACG45740.1| membrane protein [Zea mays]
Length = 334
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 46/220 (20%)
Query: 2 ERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIH 61
RGG G V+RG L + +E P P +A L L++ D +V H
Sbjct: 71 RRGGAGSCVARGFLHRFSFQPLSEN---PLLGPSSATLQKLGALVW------DKVVRE-H 120
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
+ W R + HA +HL NM+SL+ G++LE +F + V
Sbjct: 121 QGW-------------RLVTCIWLHAGVAHLLANMISLVLIGLRLE-----QQFGYVRVG 162
Query: 122 LLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLV 181
++ + G+ + SL + + +VG SG LF + + SE +TN +
Sbjct: 163 IIYLVSGVGGSVLSSLFI--------RNNISVGASGALFGLLGAM--LSELFTN--WTIY 210
Query: 182 PARYAAWAELIIIQM------FVPGVSFLGHLGGILAGIL 215
+ AA L+++ +P V H+GG L G L
Sbjct: 211 ANKAAALVTLLVVIAINLAIGILPHVDNFAHIGGFLTGFL 250
>gi|449303984|gb|EMC99991.1| hypothetical protein BAUCODRAFT_30429 [Baudoinia compniacensis UAMH
10762]
Length = 286
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 11/237 (4%)
Query: 40 LATNTLIYLRPAFLDS--LVPSI-HEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNM 96
LAT +++L AF + P++ H P I + L R PF H + H N
Sbjct: 33 LATRAVLFLLTAFYVAHLFAPALTHWGALIPQEI-RLDTLYRLNTYPFLHRNILHFALNC 91
Query: 97 MSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFS 156
+LL + E G+ + + G G L + V + S +
Sbjct: 92 FALLPLLERFEAEHGTVVTFILFTGMFGTLPGSLYTLLERYVFHLNGAAVGASVWVF--- 148
Query: 157 GVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGILY 216
+L A + V RS Y + G+ +P +++I VP SFLGH+ G A + Y
Sbjct: 149 -LLLANEAVKTYRSNPYFELAGVKIPTWTTPIFFILVINFLVPHTSFLGHMCG--AAVGY 205
Query: 217 LKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGR-GTVGGSDTRRTAP 272
L G P +++ G L+ R Y+ + YGR G + + R P
Sbjct: 206 LWGLGYIRFLAPPDWVLKFIEGKLNLLGRLPHYVSVDQKTYGRYGVLPSTGNARVGP 262
>gi|323135989|ref|ZP_08071072.1| Rhomboid family protein [Methylocystis sp. ATCC 49242]
gi|322399080|gb|EFY01599.1| Rhomboid family protein [Methylocystis sp. ATCC 49242]
Length = 537
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 23/201 (11%)
Query: 27 HRLPWK-PPVTAALLATNTLIYLRP------AFLDSLVPSIHEVWFNPHLILKYKDLKRF 79
H W+ P VT AL+A N L+++ L +LV ++ +W L+L+ + R
Sbjct: 337 HARGWRLPRVTFALVAVNALVFVAEIALGGSQNLGTLV-ALGALW--APLVLQQGEDWRL 393
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
S F H H NM+ L G +E +G+ + L + G L + ++
Sbjct: 394 LTSAFLHFGGMHFALNMLMLALIGRDVEHEIGA-------IRTLALYLGGALFSSAFVLG 446
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNS-RSEDYTNVHGLLVPARYAAWAELIIIQM-- 196
+ Y Y VG SG +FA+ V+ + R D+ L R AA A I++Q+
Sbjct: 447 LMAFGSVAYGLY-VGASGAIFALFGVVGALRVRDWLRHRASLDTFRTAALALAILVQIGA 505
Query: 197 --FVPGVSFLGHLGGILAGIL 215
+P S HL G G++
Sbjct: 506 DFLLPMSSLAAHLSGFGFGLV 526
>gi|442322030|ref|YP_007362051.1| rhomboid family protein [Myxococcus stipitatus DSM 14675]
gi|441489672|gb|AGC46367.1| rhomboid family protein [Myxococcus stipitatus DSM 14675]
Length = 241
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 24/139 (17%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + F H HL +NM ++ G LE +GS FA + + +T L A +
Sbjct: 85 RLVAAAFEHGGILHLAFNMSVVVTLGFTLERGIGSLRFAGLSL--------VTALGASAF 136
Query: 138 VLFFDYERAYY--SEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQ 195
L FD+++ S +G++G + + R W + +
Sbjct: 137 SLLFDFDKTMVGASGMILGWAGAMLPIATRQGRR--------------ELGTWLVQVAVL 182
Query: 196 MFVPGVSFLGHLGGILAGI 214
+P VS+ GHLGG L G+
Sbjct: 183 SLLPMVSWSGHLGGFLFGL 201
>gi|150020441|ref|YP_001305795.1| rhomboid family protein [Thermosipho melanesiensis BI429]
gi|149792962|gb|ABR30410.1| Rhomboid family protein [Thermosipho melanesiensis BI429]
Length = 223
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 27/146 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + F H HL +NM +L + G +E G+++F S GI LA
Sbjct: 52 RIVTAMFVHGGFIHLVFNMYALYFLGRIVENVYGTDKF-----LFFYFSTGIIGNLATQF 106
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNS----RSEDYTNVHGLLVPARYAAWAELII 193
YY+ ++VG SG +F + VL + R YT L P A+ +I+
Sbjct: 107 F--------YYNSFSVGASGAIFGLVGVLFAAGFRRDTPYT-----LKPITGTAFLPMIL 153
Query: 194 IQM---FVPG--VSFLGHLGGILAGI 214
+ + F+PG ++ HLGG L+G+
Sbjct: 154 VNIFLGFIPGSNINNAAHLGGFLSGM 179
>gi|312086618|ref|XP_003145148.1| hypothetical protein LOAG_09573 [Loa loa]
Length = 146
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 67 PHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMS 126
P IL + R S H + HL++NM+SLLWKG +LE +GS F ++ +
Sbjct: 5 PSRILYRSEWLRMLASTVMHVDDMHLYFNMISLLWKGRRLEPWLGSRRFLLLLATFALAT 64
Query: 127 QGITLLLAKSLVLFFDYE-RAYYSEYAVGFS 156
+ L+ F + Y ++ AVGFS
Sbjct: 65 SSTMVGLSYLADEVFTFNGGGYMNQCAVGFS 95
>gi|414867422|tpg|DAA45979.1| TPA: membrane protein [Zea mays]
Length = 334
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 46/220 (20%)
Query: 2 ERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIH 61
RGG G V+RG L + +E P P +A L L++ D +V H
Sbjct: 71 RRGGAGSCVARGFLHRFSFQPLSEN---PLLGPSSATLQKLGALVW------DKVVRE-H 120
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
+ W R + HA +HL NM+SL+ G++LE +F + V
Sbjct: 121 QGW-------------RLVTCIWLHAGVAHLLANMISLVLIGLRLE-----QQFGYVRVG 162
Query: 122 LLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLV 181
++ + G+ + SL + + +VG SG LF + + SE +TN +
Sbjct: 163 IIYLVSGVGGSVLSSLFI--------RNNISVGASGALFGLLGAM--LSELFTN--WTIY 210
Query: 182 PARYAAWAELIIIQM------FVPGVSFLGHLGGILAGIL 215
+ AA L+++ +P V H+GG L G L
Sbjct: 211 ANKAAALVTLLVVIAINLAIGILPHVDNFAHIGGFLTGFL 250
>gi|333383754|ref|ZP_08475409.1| hypothetical protein HMPREF9455_03575 [Dysgonomonas gadei ATCC
BAA-286]
gi|332827349|gb|EGK00109.1| hypothetical protein HMPREF9455_03575 [Dysgonomonas gadei ATCC
BAA-286]
Length = 251
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 17/91 (18%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVP-----SIHEV---WFNPHLILKYKDLKRFFLSPF 84
P VT LL N L Y L +V S+H + F PH I+ Y F
Sbjct: 14 PVVTRNLLIINVLAYFATVMLKDIVNLNNYLSLHYITSSLFMPHQIITYM---------F 64
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEF 115
H SHLF+NM ++ G LET G +F
Sbjct: 65 MHGGISHLFFNMFAVFMFGRVLETVWGPKKF 95
>gi|159124724|gb|EDP49842.1| rhomboid family protein, putative [Aspergillus fumigatus A1163]
Length = 272
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 14/181 (7%)
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-MSQGITLLLAKSLVLFF 141
PF H H F N+++L + E G+ A+ + L GI +L+ K ++
Sbjct: 72 PFIHVGFFHAFVNLLALTPLLERFEAEHGTLTAVALFIGPLSTFPAGIYILVEKFIL--- 128
Query: 142 DYERAYYSEYAVGFSGVLFAM---KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV 198
R+ + VG S +F + + + +S Y ++ +P + ++ +FV
Sbjct: 129 ---RS--NTAVVGASVWIFLLLGSEAIKTFKSNPYFSLGTTKIPTWTSPLFACALVSIFV 183
Query: 199 PGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYG 258
P SFLGHL I+ G YL G P I+R G L+ R Y+ + YG
Sbjct: 184 PNTSFLGHLSAIIIG--YLLGLGYLKVFVPPEKILRWIEGKLNLLGRLPHYVSVDQKTYG 241
Query: 259 R 259
R
Sbjct: 242 R 242
>gi|334366418|ref|ZP_08515350.1| peptidase, S54 family [Alistipes sp. HGB5]
gi|390945646|ref|YP_006409406.1| hypothetical protein Alfi_0319 [Alistipes finegoldii DSM 17242]
gi|313157384|gb|EFR56807.1| peptidase, S54 family [Alistipes sp. HGB5]
gi|390422215|gb|AFL76721.1| putative membrane protein [Alistipes finegoldii DSM 17242]
Length = 202
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPV L+ N LI++ A L +I E + L + + +F F HA+ H
Sbjct: 8 TPPVVLNLIIINVLIFMATALLPKAGNAIME-YCALSLGTPFFHVYQFITYMFLHANFEH 66
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
+F+NM +L G LE +G F M GI L + L E +
Sbjct: 67 IFFNMFALWMFGRTLEYELGQKRFLTYY-----MVCGIGAALIQYLTALAFGE---FPLV 118
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELI--IIQMF-----VPGVS 202
VG SG + + + + V LL+P A W +I +I++F V V+
Sbjct: 119 LVGASGAVMGLLLAFGVLHPN--AVIMLLIPPIPMKAKWFVVIYGVIELFLGWRGVGNVA 176
Query: 203 FLGHLGGILAGILYLK 218
H+GG+L G L L+
Sbjct: 177 HFAHVGGMLWGFLLLQ 192
>gi|145596990|ref|YP_001161287.1| rhomboid family protein [Salinispora tropica CNB-440]
gi|145306327|gb|ABP56909.1| Rhomboid family protein [Salinispora tropica CNB-440]
Length = 303
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 18/137 (13%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R + F H HL NM +L G LE S+G F A+ +VA LG + L+ A +
Sbjct: 141 RLVTAMFLHYGVIHLLLNMYALWILGRTLEASLGPARFLALYLVAGLGGNVAAYLISAPN 200
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
A + + G+ A+ VV D + V +LV ++ +
Sbjct: 201 ---------AATAGASTAIFGLFAALFVVGRRMGRDVSQVLPILVIN--------LVFTL 243
Query: 197 FVPGVSFLGHLGGILAG 213
VPG+S GHLGG+ G
Sbjct: 244 TVPGISIPGHLGGLAVG 260
>gi|392399602|ref|YP_006436202.1| rhomboid family protein [Corynebacterium pseudotuberculosis Cp162]
gi|390530680|gb|AFM06409.1| Rhomboid family protein [Corynebacterium pseudotuberculosis Cp162]
Length = 256
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFL-DSLVPSIHEVWFNPHLILKYKDLK------RFFLSPF 84
+ PVT L + +I+L AF S+ ++++ W H IL ++ R S F
Sbjct: 20 QAPVTVLLSLSTLIIFLITAFQSQSITDNLYDSWIGTHWILYTPEMHEPLGMLRAIGSMF 79
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEF-AAMVVALLGMSQGITLLLAKSLVLFFDY 143
H HL N+ L + G ++E +GS F AA ++ LG S I ++ S
Sbjct: 80 LHIGPGHLAINIFLLFFLGREIEQCIGSALFCAAYFISGLGASLMIMIMDPLS------- 132
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
A S G ++ A+ V +R D + A A + + VS
Sbjct: 133 PTAGASGAIYGLMAIMVAIAV---TRKTD--------IRAPLILVAVNVGYSLIADNVSL 181
Query: 204 LGHLGGILAG 213
GH+GG++AG
Sbjct: 182 WGHIGGLIAG 191
>gi|70992609|ref|XP_751153.1| rhomboid family protein [Aspergillus fumigatus Af293]
gi|74670449|sp|Q4WLP9.1|RBD2_ASPFU RecName: Full=Rhomboid protein 2
gi|66848786|gb|EAL89115.1| rhomboid family protein, putative [Aspergillus fumigatus Af293]
Length = 272
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 14/181 (7%)
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-MSQGITLLLAKSLVLFF 141
PF H H F N+++L + E G+ A+ + L GI +L+ K ++
Sbjct: 72 PFIHVGFFHAFVNLLALTPLLERFEAEHGTLTAVALFIGPLSTFPAGIYILVEKFIL--- 128
Query: 142 DYERAYYSEYAVGFSGVLFAM---KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV 198
R+ + VG S +F + + + +S Y ++ +P + ++ +FV
Sbjct: 129 ---RS--NTAVVGASVWIFLLLGSEAIKTFKSNPYFSLGTTKIPTWTSPLFACALVSIFV 183
Query: 199 PGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYG 258
P SFLGHL I+ G YL G P I+R G L+ R Y+ + YG
Sbjct: 184 PNTSFLGHLSAIIIG--YLLGLGYLKVFVPPEKILRWIEGKLNLLGRLPHYVSVDQKTYG 241
Query: 259 R 259
R
Sbjct: 242 R 242
>gi|45190698|ref|NP_984952.1| AER092Wp [Ashbya gossypii ATCC 10895]
gi|44983677|gb|AAS52776.1| AER092Wp [Ashbya gossypii ATCC 10895]
gi|374108175|gb|AEY97082.1| FAER092Wp [Ashbya gossypii FDAG1]
Length = 528
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 276 RCPACTFDNSGWLSICEMCGT 296
+CPACTFDN ++ CEMCGT
Sbjct: 185 KCPACTFDNHVHMNNCEMCGT 205
>gi|348501904|ref|XP_003438509.1| PREDICTED: calpain-15-like [Oreochromis niloticus]
Length = 1155
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 270 TAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDL 303
T+ W+CP+C+ N G + CE C +SR G DL
Sbjct: 323 TSASTWKCPSCSVANQGSSAKCETCRSSRGGADL 356
>gi|390938381|ref|YP_006402119.1| rhomboid family protein [Desulfurococcus fermentans DSM 16532]
gi|390191488|gb|AFL66544.1| Rhomboid family protein [Desulfurococcus fermentans DSM 16532]
Length = 447
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 35 VTAALLATNTLIYLRPA----FLDSLVPSIHEVWFNPHLILK--YKDLKRFFLSPFYHAS 88
VT ++ N L+YL + FL+S SI+ + F P + + + R F + F HA
Sbjct: 17 VTTLIILVNALVYLYTSYPNLFLESTNESIYLLGFTPATLFTNPLQGVARIFTAMFTHAD 76
Query: 89 ESHLFYNMMSLLWKGIQLETSMGS 112
H+F+NM L G ++E+ +GS
Sbjct: 77 LFHIFFNMYFLWLFGRRVESIIGS 100
>gi|358371343|dbj|GAA87951.1| rhomboid protein 2 [Aspergillus kawachii IFO 4308]
Length = 911
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 14/191 (7%)
Query: 73 YKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-MSQGITL 131
+ + R PF H H F N+++L + E G+ A+ + L + GI +
Sbjct: 62 FGTMYRLNTYPFIHLGFFHAFLNILALTPLLERFEAEHGTLTAVALFIGPLSTLPAGIYI 121
Query: 132 LLAKSLVLFFDYERAYYSEYAVGFSGVLFAM---KVVLNSRSEDYTNVHGLLVPARYAAW 188
L+ K ++ + + VG S +F + + + +S Y ++ +P +
Sbjct: 122 LIEKFVL--------HRNTAVVGSSIWVFLLLGSEAIRTFKSNPYFSLGSTKIPTWTSPL 173
Query: 189 AELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFAR 248
++ + VP SFLGHL IL G YL G P ++R G L+ R
Sbjct: 174 FACALVSILVPNTSFLGHLCAILVG--YLLGLGVLKIFVPPEKVLRWIEGKLNLLGRLPH 231
Query: 249 YLFRRPRIYGR 259
Y+ + YGR
Sbjct: 232 YVSADQKTYGR 242
>gi|150864296|ref|XP_001383053.2| Rhomboid family proteins Function unknown [Scheffersomyces stipitis
CBS 6054]
gi|149385552|gb|ABN65024.2| Rhomboid family proteins Function unknown [Scheffersomyces stipitis
CBS 6054]
Length = 282
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
DL R P +H+ H F N+++L E + G+ + + + LL + + +A
Sbjct: 59 DLNRVSFYPLFHSGLFHWFLNVLTLFQPLAIFEKTHGT-VYTGITLNLLAVLTALQYCIA 117
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL---------VPARY 185
+ Y +A+G S ++F+ L + E + + +L +P +
Sbjct: 118 GYWL--------YPGTHAIGLSALVFSFLAWLAYK-EHFVRPNIVLYRQEGSEIKLPTLF 168
Query: 186 AAWAELIIIQMFVPGVSFLGHLGGILAG 213
A A L I + +PG SF GHL G+ AG
Sbjct: 169 APVAYLFISMILLPGSSFWGHLAGLFAG 196
>gi|333999825|ref|YP_004532437.1| rhomboid family protein [Treponema primitia ZAS-2]
gi|333738842|gb|AEF84332.1| rhomboid family protein [Treponema primitia ZAS-2]
Length = 209
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
+F F H S +H+ +NM++L + G Q+E MGS EF + +T +LA L
Sbjct: 54 QFLTYMFAHGSITHILFNMLALFFFGAQVERRMGSKEFLLYYL--------VTGVLAGVL 105
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR-------YAAWAE 190
+ Y +G SG LFA+++ + D ++P R + A
Sbjct: 106 SFCIYWFTGAYMVQLMGASGALFAVQLAYATFFPDSMVYLWGILPLRAPVMVLGFTALEL 165
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILYLKLK 220
+ F GV+ L HL G G LY ++
Sbjct: 166 FSSVFGFRSGVAHLTHLAGFAFGWLYFLVR 195
>gi|298706194|emb|CBJ29235.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 256
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYN 95
T ALL N L++L+ S+ S +++ + I + + R + H HL N
Sbjct: 80 TNALLVINFLVFLQQQQDPSVTTSFYKLAYA---ITDHGEWYRLVTAVMLHGGWGHLAGN 136
Query: 96 MMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY----SEY 151
M+L G ET MG+ +F A+ V G+S + + L A + +E
Sbjct: 137 SMALFNIGRGTETYMGTEKFVALYVC-SGVSGNVLSCIVDPLTPSLGASGAIFGLLGAEA 195
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGIL 211
+ +G +M + ++S + A +A +++ + VP + GHLGG +
Sbjct: 196 MIHLAGPKASMPLFVSSVGQT----------AFFA-----VLVGLLVPNIDHWGHLGGFV 240
Query: 212 AG 213
G
Sbjct: 241 GG 242
>gi|171057356|ref|YP_001789705.1| rhomboid family protein [Leptothrix cholodnii SP-6]
gi|170774801|gb|ACB32940.1| Rhomboid family protein [Leptothrix cholodnii SP-6]
Length = 200
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 48/212 (22%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW-FNPHLILKYKDLKRFFLSPFYHA 87
+P PPVT AL+ T ++ S + + +W L + ++ L FL H
Sbjct: 1 MPQLPPVTKALMLICTAMFCVQLLFGSWLEGLFALWPLGSGLFMPWQPLTHAFL----HG 56
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEF-------------AAMVVALLGMSQGITLLLA 134
HLF+NM L G ++E G + A M+V+LLG+ G T+ +
Sbjct: 57 DPLHLFFNMFGLWMFGSEIEMIWGRKRYWHFLLASAVAGAVAQMLVSLLGIPMGPTVGAS 116
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLN------SRSEDYTNVHGLLVPARYAAW 188
+L + A+ G++F ++++ +++ + V G +
Sbjct: 117 GAL---YGLLLAF---------GMMFPERIIMPLFPPIPMKAKIFVVVFGGIA------- 157
Query: 189 AELIIIQMFVP--GVSFLGHLGGILAGILYLK 218
++ +F P GV+ HLGG+L G L ++
Sbjct: 158 ---LLSGIFSPTGGVAHFAHLGGMLGGWLMIR 186
>gi|260951065|ref|XP_002619829.1| hypothetical protein CLUG_00988 [Clavispora lusitaniae ATCC 42720]
gi|238847401|gb|EEQ36865.1| hypothetical protein CLUG_00988 [Clavispora lusitaniae ATCC 42720]
Length = 269
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNV--------HGLLVPARYAAWAELIIIQMFV 198
Y S+ G SG+ F+ + + V H L VP Y + L +I + +
Sbjct: 115 YPSDAVAGLSGICFSFLTYFCYKEHEMKPVIMSLNFAGHELQVPTIYFPFFNLFLIALII 174
Query: 199 PGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTII 233
P SF GHL GI AG YL G S P II
Sbjct: 175 PSTSFFGHLAGIGAG--YLLAMGKLSVLYPPAKII 207
>gi|146162537|ref|XP_001009676.2| Rhomboid family protein [Tetrahymena thermophila]
gi|146146309|gb|EAR89431.2| Rhomboid family protein [Tetrahymena thermophila SB210]
Length = 239
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 39/228 (17%)
Query: 12 RGMLPLLALHAFNEY-HRLPWKPPVTAALLATNTLIY-------LRPA-FLDSLVPSIHE 62
+GM P + N++ +R+ PVT +LL N L++ ++P+ F+D+ +
Sbjct: 32 QGMKPQFNYNRVNQFFYRM--NNPVTYSLLGANLLVFGLYQFRVIKPSTFIDNFTLGQKQ 89
Query: 63 VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV-- 120
+ N H +Y L + F H + HL NM+ L + G +E GS A +
Sbjct: 90 I--NQH---RYHTLATY---SFAHTNLMHLGANMIGLYFFGKFIENQFGSRALAKLYFGG 141
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL 180
ALLG GI +LL D + ++ +G S + A+ T V+
Sbjct: 142 ALLG---GIFILL--------DLYKKRSNQIHIGASASISAIVTNFTLNFPRLT-VYFFF 189
Query: 181 VPARYAAWAELIIIQMFV-----PGVSFLGHLGGIL-AGILYLKLKGG 222
+P LI++Q V VS GHLGGI+ G+ Y +K G
Sbjct: 190 IPMPAWVLGILILLQSVVFYGDNGSVSHQGHLGGIVFGGLSYFLMKKG 237
>gi|124359588|gb|ABD28718.2| Protein secE/sec61-gamma protein; Rhomboid-like protein [Medicago
truncatula]
Length = 324
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 69 LILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG 128
L++ ++ RF F HA HL NM SLL+ G++LE NEF + + +L + G
Sbjct: 102 LVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLE-----NEFGFLKIGVLYLLSG 156
Query: 129 I--TLLLAKSLVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVP 182
+LL S++ D + + +VG SG LF AM L + Y N +
Sbjct: 157 FGGSLL---SILHMGDVKAP--NTVSVGASGALFGLLGAMLSELLTNWTIYLNKGEKPLT 211
Query: 183 ARYAAWAELIII------QMFVPGVSFLGHLGGILAG 213
++ A L++I F+P V H+GG L+G
Sbjct: 212 VQFKALTSLLLIIGLNLAVGFIPHVDNSAHIGGFLSG 248
>gi|325677503|ref|ZP_08157167.1| rhomboid family protein [Rhodococcus equi ATCC 33707]
gi|325551750|gb|EGD21448.1| rhomboid family protein [Rhodococcus equi ATCC 33707]
Length = 300
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 29/187 (15%)
Query: 30 PWKPPVTAALLATNTLIYLRPAF-----LDSLVPS---IHEVWFNPHLILKYKDLKRFFL 81
P P +T L+A N I+ A +D+ V S + V + P + + R
Sbjct: 80 PPTPLLTYVLIAVNVAIFAVTAVQSRSVMDNHVASPLFLDWVLWGPAV--AAGEFSRIVT 137
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMG-SNEFAAMVVALLGMSQGITLLLAKSLVLF 140
S F H HL NM +L G E +G + FA V+ALLG S + +L LV
Sbjct: 138 SGFLHIGLMHLAVNMFALYVIGRDTEMVLGRARYFAVYVIALLGGSASVLML--DPLVPT 195
Query: 141 FDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPG 200
A + G+L A V+L T V A A +II + +PG
Sbjct: 196 AGASGAIF--------GLLGAQAVILLRLKRSPTPV--------LAVIAINVIISITIPG 239
Query: 201 VSFLGHL 207
+S GH+
Sbjct: 240 ISLWGHM 246
>gi|254566099|ref|XP_002490160.1| Possible rhomboid protease, has similarity to eukaryotic rhomboid
proteases including Pcp1p [Komagataella pastoris GS115]
gi|238029956|emb|CAY67879.1| Possible rhomboid protease, has similarity to eukaryotic rhomboid
proteases including Pcp1p [Komagataella pastoris GS115]
gi|328350561|emb|CCA36961.1| rhomboid family protein [Komagataella pastoris CBS 7435]
Length = 258
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
L + +L + L P H+S HLF+N+ +L+ E S G+ +V+ +L + +
Sbjct: 57 LYHLNLNKISLYPLVHSSFLHLFFNIFALISPLSLYERSNGTVH-TGVVLNVLAVVTALP 115
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAE 190
+ +V F S + F F L S S V +P +
Sbjct: 116 YCVL-GMVFFPKVSVVGASAWCFSF----FGYYSYLQSLSYPTFKVQDYEIPTIATPFIL 170
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSW-PLRFARY 249
L+ + PG SF+GHL G+L+G L GY L +I ++ V+SW R +Y
Sbjct: 171 LVASALIFPGSSFIGHLLGLLSG---FALAKGY-----LKPLIEPSSKVISWLEERLEKY 222
Query: 250 LFRRPRI 256
+ P +
Sbjct: 223 IDMIPLV 229
>gi|397612198|gb|EJK61641.1| hypothetical protein THAOC_17833 [Thalassiosira oceanica]
Length = 620
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 35/165 (21%)
Query: 86 HASESHLFYNMMSLLWKGIQLETSM-GSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H H+ +NMMS+ G ++E S+ S EF AL+ + I + + + + + +
Sbjct: 160 HFEPLHIGFNMMSMNTLGSEIEGSLLNSVEFLMWNGALVVYTTMIMMAMVYARIRYLQRK 219
Query: 145 -----------RAYYSEY--------AVGFSGVLFAMKVV--------------LNSRSE 171
+A Y E +VG+S VLFA V+ LN
Sbjct: 220 IDACGNAQPQLQATYEEKQELLRDTSSVGYSAVLFAWMVISTMERKQPTCPIPFLNDVCF 279
Query: 172 DYTNVHGL-LVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
V GL + + L + Q +P VSF+GHL GI+AG L
Sbjct: 280 STYEVPGLPFLRFNLSPIVSLFVCQFIMPRVSFMGHLAGIVAGFL 324
>gi|313884239|ref|ZP_07818005.1| peptidase, S54 family [Eremococcus coleocola ACS-139-V-Col8]
gi|312620686|gb|EFR32109.1| peptidase, S54 family [Eremococcus coleocola ACS-139-V-Col8]
Length = 229
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 92/220 (41%), Gaps = 27/220 (12%)
Query: 31 WKPPVTAALLATNT-------LIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSP 83
+KP +T A L N L+Y DS V F P+ + + + R +
Sbjct: 7 FKPWLTYAFLVINIGWFAFTYLVYGTTT--DSRVLLDTGANFMPY-VFQNHEYWRILSAT 63
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H SHL +NMM+L + G +LE +G +F ++ + G+ +T L
Sbjct: 64 FVHIGMSHLLFNMMTLYFMGPELEEILGHIKF-LLIYLIAGIGGNLTSL----------- 111
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR-YAAWAELIIIQMFV-PGV 201
A+ + + G S LF M + + + H L +R + L ++ F+ PG+
Sbjct: 112 --AFNTGVSAGASTALFGMFAAFIVLAIIHPDSHYLWQRSRSFIILVGLNLVNGFLSPGI 169
Query: 202 SFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLS 241
GHLGG+L G L + G G RG VLS
Sbjct: 170 DNWGHLGGLLFGALATYVIGS-KGKSKAKLWQRGLVAVLS 208
>gi|345561482|gb|EGX44571.1| hypothetical protein AOL_s00188g239 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 270 TAPII---WRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIER 326
T PI+ W CPACTF N C +C R+ L D +R I L + R+ ER
Sbjct: 382 TVPIVSPGWSCPACTFRNEESHLQCSLCRVERN-TKLHDDSETRAQIIALRDFERRKAER 440
>gi|221069925|ref|ZP_03546030.1| Rhomboid family protein [Comamonas testosteroni KF-1]
gi|220714948|gb|EED70316.1| Rhomboid family protein [Comamonas testosteroni KF-1]
Length = 500
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 24/156 (15%)
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F S F H S SHL NM+ L G LE ++G+ + A V I + A L
Sbjct: 163 FTSIFLHGSTSHLLGNMVFLFLFGFTLELALGAFTYLAFYV--------IGGIGASLFAL 214
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV- 198
F Y A G L AM V+ R + LL YA+W LI++ +++
Sbjct: 215 MFYAGMGGYGLGASGAISALMAMYAVMY-RMRRIRFFYMLLFYFNYASWPALIMLPVWMG 273
Query: 199 ----------PGVSFLGHLGGILAGIL----YLKLK 220
V+++ H GG+LAG L Y++L+
Sbjct: 274 VELLQHLLGGKQVAYMAHFGGLLAGSLLMWIYMRLQ 309
>gi|167752897|ref|ZP_02425024.1| hypothetical protein ALIPUT_01159 [Alistipes putredinis DSM 17216]
gi|167659966|gb|EDS04096.1| peptidase, S54 family [Alistipes putredinis DSM 17216]
Length = 213
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 32 KPPVTAALLATNTLIYLRPAFL---DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
PPV L+ N L+ L L + +V ++ L Y+ + FL H
Sbjct: 10 TPPVVLNLIIINALMLLATELLPVGNRIVGALALFNVESPLFHSYQLVTYMFL----HGG 65
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
SHLF+NM +L G LE +GS F + + G+ G+ LL L +Y
Sbjct: 66 FSHLFFNMFALWMFGRTLEYELGSKRFLTYYM-VCGVGAGVLQLLVGWL----EYRYGNV 120
Query: 149 SEYA-----VGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELI--IIQMF-- 197
A VG SG +F + + + V LL+P A W ++ +I++F
Sbjct: 121 GMMALMVPTVGASGAVFGLLLAFGVMHPN--AVIMLLIPPIPMKAKWFVVVYGVIELFFG 178
Query: 198 ----VPGVSFLGHLGGILAGIL---YLKLKG 221
+ GV+ H+GG+L G L Y K KG
Sbjct: 179 ISGRMDGVAHFAHVGGMLWGFLLLYYWKHKG 209
>gi|342321566|gb|EGU13499.1| Hypothetical Protein RTG_00227 [Rhodotorula glutinis ATCC 204091]
Length = 690
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 61/146 (41%), Gaps = 26/146 (17%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
RFF+ F HA HL NM++ Q+E MG+ F ++V L G L +L
Sbjct: 466 RFFVPIFLHAGVVHLLLNMLAQCTSSAQVERMMGTPRF--LIVYLAAGIFGFVLGANFAL 523
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKV-----VLNSRSEDYTNVHGLLVPARYAAWAELI 192
V + +VG SG +F +L +Y + LL I
Sbjct: 524 V----------GQPSVGASGAIFGTHAALLVDLLAHWKIEYRPLRKLLF------LVVEI 567
Query: 193 IIQM---FVPGVSFLGHLGGILAGIL 215
II + +VPGV HLGG L G+L
Sbjct: 568 IIGLGLGWVPGVDNFAHLGGFLMGLL 593
>gi|300857436|ref|YP_003782419.1| hypothetical protein cpfrc_00019 [Corynebacterium
pseudotuberculosis FRC41]
gi|383313212|ref|YP_005374067.1| rhomboid family protein [Corynebacterium pseudotuberculosis P54B96]
gi|384503626|ref|YP_005680296.1| rhomboid family protein [Corynebacterium pseudotuberculosis 1002]
gi|384505717|ref|YP_005682386.1| rhomboid family protein [Corynebacterium pseudotuberculosis C231]
gi|384507809|ref|YP_005684477.1| rhomboid family protein [Corynebacterium pseudotuberculosis I19]
gi|384509905|ref|YP_005689483.1| rhomboid family protein [Corynebacterium pseudotuberculosis PAT10]
gi|385806458|ref|YP_005842855.1| rhomboid family protein [Corynebacterium pseudotuberculosis 267]
gi|387135581|ref|YP_005691561.1| rhomboid family protein [Corynebacterium pseudotuberculosis
42/02-A]
gi|300684890|gb|ADK27812.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302205176|gb|ADL09518.1| Rhomboid family protein [Corynebacterium pseudotuberculosis C231]
gi|302329735|gb|ADL19929.1| Rhomboid family protein [Corynebacterium pseudotuberculosis 1002]
gi|308275418|gb|ADO25317.1| Rhomboid family protein [Corynebacterium pseudotuberculosis I19]
gi|341823844|gb|AEK91365.1| Rhomboid family protein [Corynebacterium pseudotuberculosis PAT10]
gi|348606026|gb|AEP69299.1| Rhomboid family protein [Corynebacterium pseudotuberculosis
42/02-A]
gi|380868713|gb|AFF21187.1| Rhomboid family protein [Corynebacterium pseudotuberculosis P54B96]
gi|383803851|gb|AFH50930.1| Rhomboid family protein [Corynebacterium pseudotuberculosis 267]
Length = 256
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFL-DSLVPSIHEVWFNPHLILKYKDLK------RFFLSPF 84
+ PVT L + +I+L AF S+ ++++ W H IL ++ R S F
Sbjct: 20 QAPVTVLLSLSTLIIFLITAFQSQSITDNLYDSWIGTHWILYTPEMHEPLGMLRAIGSMF 79
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H HL N+ L + G ++E +GS F A + I+ L A +++ D
Sbjct: 80 LHIGPGHLAINIFLLFFLGREIEQCIGSALFCA--------AYFISGLGASLMIMIMDPL 131
Query: 145 RAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ M +++ T++ L+ LI VS
Sbjct: 132 SP-----TAGASGAIYGLMAIMVAIAVTRKTDIRAPLILVAVNVGYSLI-----ADNVSL 181
Query: 204 LGHLGGILAG 213
GH+GG++AG
Sbjct: 182 WGHIGGLVAG 191
>gi|159040476|ref|YP_001539729.1| rhomboid family protein [Salinispora arenicola CNS-205]
gi|157919311|gb|ABW00739.1| Rhomboid family protein [Salinispora arenicola CNS-205]
Length = 303
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 18/139 (12%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R + F H HL NM +L G LE S+G F A+ +++ LG + L+ A +
Sbjct: 141 RLITAMFLHYGVIHLLLNMYALWILGRNLEASLGPARFLALYLISGLGGNVAAYLISAPN 200
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
A + + G+ A+ VV D + V +LV ++ +
Sbjct: 201 ---------AATAGASTAIFGLFAALFVVGRRLGRDVSQVLPILVIN--------LVFTL 243
Query: 197 FVPGVSFLGHLGGILAGIL 215
VPG+S GHLGG++ G L
Sbjct: 244 TVPGISIPGHLGGLVLGAL 262
>gi|375287605|ref|YP_005122146.1| rhomboid family protein [Corynebacterium pseudotuberculosis 3/99-5]
gi|371574894|gb|AEX38497.1| Rhomboid family protein [Corynebacterium pseudotuberculosis 3/99-5]
Length = 249
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFL-DSLVPSIHEVWFNPHLILKYKDLK------RFFLSPF 84
+ PVT L + +I+L AF S+ ++++ W H IL ++ R S F
Sbjct: 13 QAPVTVLLSLSTLIIFLITAFQSQSITDNLYDSWIGTHWILYTPEMHEPLGMLRAIGSMF 72
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H HL N+ L + G ++E +GS F A + I+ L A +++ D
Sbjct: 73 LHIGPGHLAINIFLLFFLGREIEQCIGSALFCA--------AYFISGLGASLMIMIMDPL 124
Query: 145 RAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ M +++ T++ L+ LI VS
Sbjct: 125 SP-----TAGASGAIYGLMAIMVAIAVTRKTDIRAPLILVAVNVGYSLI-----ADNVSL 174
Query: 204 LGHLGGILAG 213
GH+GG++AG
Sbjct: 175 WGHIGGLVAG 184
>gi|291515609|emb|CBK64819.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Alistipes shahii WAL 8301]
Length = 200
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 32 KPPVTAALLATNTLIYLRPAFL---DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
PPV L+ N L+Y+ A L D+++ P Y +F F HA+
Sbjct: 7 TPPVVKNLIIINVLVYMATALLPVGDTIMQYCALSLGTP-----YFHTYQFITYMFLHAN 61
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAA--MVVAL-LGMSQGITLLLAKSLVLFFDYER 145
H+F+NM +L G LE +GS F MV + + Q +T L L L
Sbjct: 62 FEHIFFNMFALWMFGRTLEYELGSQRFLTFYMVCGVGAALIQYLTALAFGELPLLL---- 117
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELI--IIQMF---- 197
VG SG + + + + V LL+P A W +I +I++F
Sbjct: 118 -------VGASGAVMGLLLAFGVMHPN--AVIMLLIPPIPMKAKWFVIIYAVIELFLGWK 168
Query: 198 -VPGVSFLGHLGGILAGILYL 217
V V+ H+GG+L G L L
Sbjct: 169 GVGNVAHFAHVGGMLWGFLLL 189
>gi|321478580|gb|EFX89537.1| hypothetical protein DAPPUDRAFT_303248 [Daphnia pulex]
Length = 964
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 275 WRCPACTFDNSGWLSI-CEMCGTSRSGNDLSSD---QLSRHSNIPLEELRHRRIER 326
W+C ACTF N S CE+C +SRS LS +SRH + P LRH E+
Sbjct: 308 WQCSACTFHNKKSKSYSCEICQSSRSLTALSPPAPAAISRHESEPSASLRHTEEEQ 363
>gi|293193637|ref|ZP_06609859.1| rhomboid family protein [Actinomyces odontolyticus F0309]
gi|292819869|gb|EFF78872.1| rhomboid family protein [Actinomyces odontolyticus F0309]
Length = 292
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 28/189 (14%)
Query: 32 KPPVTAALLATNTLIY----LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
P VT A++A L+Y L P SL ++ W H + L FL H
Sbjct: 73 TPVVTYAMMAICVLMYVVTLLAPTTKLSL--ALVPAWLMAH---PWTVLTGAFL----HG 123
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAA--MVVALLGMSQGITLLLAKSLVLFFDYER 145
H+ +NM+SL W G +E +G F +V AL G + + L + +F
Sbjct: 124 GIMHILFNMLSLYWVGRAIEPVLGRWRFLTLYLVSALGGSAFILVWCLIQPSEIFVSTVG 183
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
A S G G +F ++ + S + + G+ ++ V G+S+ G
Sbjct: 184 A--SGAVFGLFGAVFVLQRLGGSDTTAILTLLGI-----------NLVYGFMVSGISWQG 230
Query: 206 HLGGILAGI 214
H+GG +AG+
Sbjct: 231 HIGGAIAGV 239
>gi|255553147|ref|XP_002517616.1| KOM, putative [Ricinus communis]
gi|223543248|gb|EEF44780.1| KOM, putative [Ricinus communis]
Length = 303
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMG 111
+P I+K + RFF + HA HLF NM+SLL+ GI+LE G
Sbjct: 101 LDPMAIVKNGEAWRFFSCIWLHAGVVHLFTNMISLLFIGIRLEEEFG 147
>gi|20093492|ref|NP_613339.1| membrane serine protease [Methanopyrus kandleri AV19]
gi|19886321|gb|AAM01269.1| Predicted membrane serine protease of the Rhomboid superfamily
[Methanopyrus kandleri AV19]
Length = 210
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 48 LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLE 107
+RP L S +H + +P ++ Y F HA+ HL +NM+ LL G+QLE
Sbjct: 25 IRPDVLYSYGLYLHNITVHPECLITYM---------FLHANLIHLLFNMLGLLTFGVQLE 75
Query: 108 TSMGSNEF 115
+ ++EF
Sbjct: 76 RVLSTSEF 83
>gi|344175988|emb|CCA87141.1| putative rhomboid protease [Ralstonia syzygii R24]
Length = 543
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 23/224 (10%)
Query: 3 RGGGGWRVSRGMLPLLALHAFNEY-HRLPWKPPVTAALLATNTLIYL-RPAFLDSLVPSI 60
RGG + + P A F E L +P +T AL+A N L++L P +L+ +
Sbjct: 148 RGGTAGAQAIPVNPFKAERQFTEQLEALTPRPYLTHALIALNVLVWLATPGLGGNLLQTP 207
Query: 61 HEVWF----NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA 116
+V F N +++ + R + F HA HL N++ L GI +E G A
Sbjct: 208 IDVLFKLGGNAAFEVQHGEWWRLLSATFLHAGVLHLVINVIGLYATGIAVERIYGP---A 264
Query: 117 AMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNV 176
A ++ LG LL +L L F + A VG SG +F + Y
Sbjct: 265 AYLLIYLGAG-----LLGSALSLSFAAQHA----IGVGASGAVFGVAGAWLVAICRYRGQ 315
Query: 177 HGLLVPARYAAWAELIIIQMFV-----PGVSFLGHLGGILAGIL 215
+ R + ++ V PGV H+GG++ G +
Sbjct: 316 MPATLSKRLLTQLGMFVLYSLVQGLTKPGVDNAAHIGGLVGGCM 359
>gi|218187398|gb|EEC69825.1| hypothetical protein OsI_00145 [Oryza sativa Indica Group]
Length = 780
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 272 PIIWRCPACTFDNSGWLSICEMCGTSR 298
P++WRC C FDN + CEMCG R
Sbjct: 212 PVLWRCSMCMFDNHESMVYCEMCGVFR 238
>gi|443287776|ref|ZP_21026871.1| Rhomboid family protein [Micromonospora lupini str. Lupac 08]
gi|385882192|emb|CCH21804.1| Rhomboid family protein [Micromonospora lupini str. Lupac 08]
Length = 303
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 18/137 (13%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R + F H HL NM +L G LE ++G F A+ ++A LG
Sbjct: 141 RLVTAMFLHYGVIHLLLNMWALWVLGRSLEANLGPLRFGALYLIAGLG---------GNV 191
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
F + + + + G+ A+ ++ D + V +LV ++ +
Sbjct: 192 AAYLFSAQNSATAGASTAVFGLFAALIIIERKLGRDISQVIPILVIN--------LVFTL 243
Query: 197 FVPGVSFLGHLGGILAG 213
VPG+S GHLGG++ G
Sbjct: 244 TVPGISIPGHLGGLVVG 260
>gi|317030716|ref|XP_001393177.2| rhomboid protein 2 [Aspergillus niger CBS 513.88]
Length = 270
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 8/188 (4%)
Query: 73 YKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-MSQGITL 131
+ + R PF H H F N+++L + E G+ A+ + L + GI +
Sbjct: 62 FGTMYRLNTYPFIHLGFFHAFLNILALTPLLERFEAEHGTLTAVALFIGPLSTLPAGIYI 121
Query: 132 LLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
L+ K F R + + +L + + +S Y ++ +P +
Sbjct: 122 LIEK-----FVLHRNTAVVGSSIWVFLLLGSEAIRTFKSNPYFSLGSTKIPTWTSPLFAC 176
Query: 192 IIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLF 251
++ + VP SFLGHL IL G YL G P ++R G L+ R Y+
Sbjct: 177 ALVSILVPNTSFLGHLCAILVG--YLLGLGVLKIFVPPEKVLRWIEGKLNLLGRLPHYVS 234
Query: 252 RRPRIYGR 259
+ YGR
Sbjct: 235 VDQKTYGR 242
>gi|145221663|ref|YP_001132341.1| rhomboid family protein [Mycobacterium gilvum PYR-GCK]
gi|145214149|gb|ABP43553.1| Rhomboid family protein [Mycobacterium gilvum PYR-GCK]
Length = 279
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
P VT AL+ N L + L P + + + ++ R S F H +H
Sbjct: 66 TPVVTYALIGINLLAFA----LQMASPGLQRAFGLWSPAVADGEMYRLLTSAFLHFGLTH 121
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
L +NM++L + G LE ++G F + +V+ LG S + LL +L A S
Sbjct: 122 LAFNMLALYFVGPPLEAALGRARFITLYLVSALGGSVLVYLLTLNALT-------AGASG 174
Query: 151 YAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP-GVSFLGHLGG 209
G G F + LN D +V ++V A +I +F +S+ GH+GG
Sbjct: 175 AVFGLFGATFVVGRKLN---MDVRSVMAIIV----LNLAFTFLIPLFTSQNISWQGHIGG 227
Query: 210 ILAG 213
++ G
Sbjct: 228 LVTG 231
>gi|403727958|ref|ZP_10947871.1| rhomboid family protein [Gordonia rhizosphera NBRC 16068]
gi|403203710|dbj|GAB92202.1| rhomboid family protein [Gordonia rhizosphera NBRC 16068]
Length = 254
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 32 KPPVTAALLATNTLIYLRPAF----LDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHA 87
+P T L+A N +I++ A +D L + W + + R + F H
Sbjct: 26 RPYATYGLIAVNVVIFVICALQARGVDMLRSQLFVDWALYKPWVADGEYWRLLTAGFLHF 85
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERA 146
S +H+ NM+SL G LE ++G + + + ALLG S + +L A + V A
Sbjct: 86 SVTHIAVNMLSLYILGRDLEIAIGIPRYLGVYLTALLGGSAAVMVLGADNGV------NA 139
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGH 206
S G G + + VV+ +R+ T V ++V +++ + +PG+S H
Sbjct: 140 GASGAIYGLMGAV--LVVVIKARASP-TPVITIIVLN--------LVLSVTIPGISLFAH 188
Query: 207 LGGILAG 213
+GG++ G
Sbjct: 189 VGGLVFG 195
>gi|50547373|ref|XP_501156.1| YALI0B20878p [Yarrowia lipolytica]
gi|74635233|sp|Q6CDV6.1|RBD2_YARLI RecName: Full=Rhomboid protein 2
gi|49647022|emb|CAG83409.1| YALI0B20878p [Yarrowia lipolytica CLIB122]
Length = 297
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 18/196 (9%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLS 82
F ++ + PP L+ I+L FL S VW L L+ L F L+
Sbjct: 7 FQKFQKAIQHPPA----LSLGLPIFLTVIFLLSQ----RYVWIEDDLELRSTALTNFELN 58
Query: 83 -----PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
P HA+ HL N+++L Q E G+ +V+ +L + I L S+
Sbjct: 59 RISFYPLVHATWFHLLLNLVALQPIVSQFERVNGTVR-TGIVLNILAVVTAIPWCLL-SI 116
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
F D S + F G +A++ +S+ L+VP L++I +
Sbjct: 117 GFFPDEAVLGSSAWIFSFMG-YWAIRE--SSKQPTTQLAPNLVVPTWLLPIIYLVVIAIV 173
Query: 198 VPGVSFLGHLGGILAG 213
+P SF+GHL G++AG
Sbjct: 174 IPSSSFIGHLLGLIAG 189
>gi|398784354|ref|ZP_10547618.1| hypothetical protein SU9_14461 [Streptomyces auratus AGR0001]
gi|396995277|gb|EJJ06295.1| hypothetical protein SU9_14461 [Streptomyces auratus AGR0001]
Length = 303
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 26/141 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R + F H +H+ +NM+SL W G LE ++G F A+ ++A LG S
Sbjct: 141 RLLTAMFLHQQVAHIAFNMLSLWWLGPPLEAALGRARFIALYLLAGLGGSA--------- 191
Query: 137 LVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
Y A ++ ++G SG +F A V+L D V LL +
Sbjct: 192 ----LSYFLAAQNQPSLGASGAIFGLLGATAVLLRRLRYDMKPVLILL--------GLNL 239
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ P +++ H+GG++ G
Sbjct: 240 VFTFLWPNIAWQAHVGGLVVG 260
>gi|227877719|ref|ZP_03995755.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|312984383|ref|ZP_07791722.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
gi|227862707|gb|EEJ70190.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|310894227|gb|EFQ43310.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
Length = 228
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R F++ F H HL N + + + G +E MG F +V LL G + LA
Sbjct: 60 RLFMAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHVRF--LVTYLLAGVGGNLMSLA--- 114
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELI--I 193
F +R + + G+ AM + N+H ++ R A LI
Sbjct: 115 ---FSADRGLSAGASTALFGLFGAMTAI------GLRNLHNPMIAFLGRQAFVLALINLA 165
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
+ +FVPG+ GH+GG++AG L
Sbjct: 166 LDIFVPGIDIWGHIGGLIAGFL 187
>gi|154148562|ref|YP_001406738.1| DNA repair protein RadA [Campylobacter hominis ATCC BAA-381]
gi|153804571|gb|ABS51578.1| DNA repair protein RadA [Campylobacter hominis ATCC BAA-381]
Length = 447
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 269 RTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSNIPLEELRHRRIE 325
+T P+I+ C C S WL C CG S +L ++Q+ + I E+ H +E
Sbjct: 3 KTKPVIYECEFCGNQQSRWLGKCPECGAFNSFKELKAEQIKVLNEIA--EISHAGVE 57
>gi|432850159|ref|XP_004066741.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Oryzias latipes]
Length = 1053
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRSGN 301
W C ACT+ NSG L CEMC RS +
Sbjct: 574 WNCGACTYSNSGLLPYCEMCEFPRSAS 600
>gi|365827061|ref|ZP_09368936.1| hypothetical protein HMPREF0975_00719 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365265470|gb|EHM95232.1| hypothetical protein HMPREF0975_00719 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 279
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
RF + F HA+ HL +NM +L G LE +G F A+ +++ LG S I L
Sbjct: 114 RFLTTAFLHANYMHLGFNMWALWVLGGSLEPVLGRWRFTAVYLLSALGGSTAIYWLSWP- 172
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFA----MKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
+ + VG SG +F M VV D + + LL A
Sbjct: 173 -------DTDAWGTMTVGASGAVFGLFSTMFVVQRRFGRDTSGIVALL--------AINA 217
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+I +S+ GHLGG++ G
Sbjct: 218 VISFLGANISWQGHLGGLIVG 238
>gi|198274049|ref|ZP_03206581.1| hypothetical protein BACPLE_00186 [Bacteroides plebeius DSM 17135]
gi|198273127|gb|EDY97396.1| peptidase, S54 family [Bacteroides plebeius DSM 17135]
Length = 297
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F HA H+ +NM+ L W G +L + S++ + L G+ G+ +LA ++ +F
Sbjct: 76 FMHAGVLHILFNMLWLFWFG-RLFLAFFSSKHLRGLYFLGGICGGLLYMLAYNVFPYF-- 132
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPA---RYAAWAELIIIQMFVPG 200
+ YS Y +G S + A+ V ++ R +Y V L + +Y A + + +F+
Sbjct: 133 QDVVYSSYLLGASASVLAIVVAVSVREPNYP-VQFLFIGTVRLKYVALFMVALDLLFMTS 191
Query: 201 VS---FLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRI 256
+ + HLGG LAG + G SG D I V W R + R+P++
Sbjct: 192 ENAGGHIAHLGGALAGWWF--AAGLQSGHDATKWI----NLVCDWFAGLGRPVKRKPKM 244
>gi|295693318|ref|YP_003601928.1| hypothetical protein LCRIS_01456 [Lactobacillus crispatus ST1]
gi|295031424|emb|CBL50903.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 228
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R F++ F H HL N + + + G +E MG F +V LL G + LA
Sbjct: 60 RLFMAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHVRF--LVTYLLAGVGGNLMSLA--- 114
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELI--I 193
F +R + + G+ AM + N+H ++ R A LI
Sbjct: 115 ---FSADRGLSAGASTALFGLFGAMTAI------GLRNLHNPMIAFLGRQAFVLALINLA 165
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
+ +FVPG+ GH+GG++AG L
Sbjct: 166 LDIFVPGIDIWGHIGGLIAGFL 187
>gi|241155739|ref|XP_002407633.1| calcium-dependent cysteine protease, putative [Ixodes scapularis]
gi|215494153|gb|EEC03794.1| calcium-dependent cysteine protease, putative [Ixodes scapularis]
Length = 1067
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 253 RPRIYGRGTV-GGSDTRRTAPII-------WRCPACTFDNSGWLSICEMCGTSRS 299
RP GTV G+ RR ++ W C +CTF NSG + CEMC TSRS
Sbjct: 382 RPSPVNGGTVRPGTRNRRMTKLLGEPAEDAWECASCTFLNSGPHAACEMCCTSRS 436
>gi|389849381|ref|YP_006351616.1| rhomboid family protein [Corynebacterium pseudotuberculosis 258]
gi|388246687|gb|AFK15678.1| Rhomboid family protein [Corynebacterium pseudotuberculosis 258]
Length = 265
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFL-DSLVPSIHEVWFNPHLILKYKDLK------RFFLSPF 84
+ PVT L + +I+L AF S+ ++++ W H IL ++ R S F
Sbjct: 29 QAPVTVLLSLSTLIIFLITAFQSQSITDNLYDSWIGTHWILYTPEMHEPLGMLRAIGSMF 88
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H HL N+ L + G ++E +GS F A + I+ L A +++ D
Sbjct: 89 LHIGPGHLAINIFLLFFLGREIEQCIGSALFCA--------AYFISGLGASLMIMIMDPL 140
Query: 145 RAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ M +++ T++ L+ LI VS
Sbjct: 141 SP-----TAGASGAIYGLMAIMVAIAITRKTDIRAPLILVAVNVGYSLI-----ADNVSL 190
Query: 204 LGHLGGILAG 213
GH+GG++AG
Sbjct: 191 WGHIGGLVAG 200
>gi|354615757|ref|ZP_09033490.1| Rhomboid family protein [Saccharomonospora paurometabolica YIM
90007]
gi|353219898|gb|EHB84403.1| Rhomboid family protein [Saccharomonospora paurometabolica YIM
90007]
Length = 311
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 32/201 (15%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPH-----LILKYK-DLKRFFL 81
R+ + VT L+ N I++ A L S H F L + Y+ + R F
Sbjct: 87 RVADRALVTPVLIGLNAAIFVLTALLASDPLQNHLSRFFADGTMQTLAVAYEGEWWRLFT 146
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLF 140
S F H HL NM+ L + G +E +G F + VA+L S + F
Sbjct: 147 SGFLHYGLVHLGMNMLVLWFLGRDVELLLGKVRFLTLYFVAMLAGSVAV--------YAF 198
Query: 141 FDYERAYYSEYAVGFSGVLFAMKVVLNSRSE----DYTNVHGLLVPARYAAWAELIIIQM 196
D+ A G SG ++ + L + T G++V +++ +
Sbjct: 199 GDFNTA-----TAGASGAIYGLLGALLVAVLRLKLNPTMAIGIIVLN--------LVLSV 245
Query: 197 FVPGVSFLGHLGGILAGILYL 217
+PG+S LGHLGG++AG L +
Sbjct: 246 TIPGISLLGHLGGLIAGALVM 266
>gi|187934985|ref|YP_001884978.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
gi|187723138|gb|ACD24359.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
Length = 321
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 27 HRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIH-------EVWFNPHLILKYK-DLKR 78
++ T L+A N +I+L AF+ + +I +NP L Y+ ++ R
Sbjct: 130 NKFSKNKKSTLILIAMNVIIFLLTAFISRRILTIDINVLINFGAKYNP---LIYQGEIWR 186
Query: 79 FFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV 138
F H +HL NM SL G Q+E G ++ + S +++LL ++ V
Sbjct: 187 LITCAFLHGGIAHLLSNMYSLYILGPQVERIFGLKKYLCIYFTSAITSSLLSVLLNENSV 246
Query: 139 LFFDYERAYYSEYAVGFSGVLFAM--KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
+VG SG +F + +++ S E + G ++ LI++
Sbjct: 247 -------------SVGASGAIFGLLGAILIFSIKERHRIKKGYIL--NLVGIIILILMSG 291
Query: 197 F-VPGVSFLGHLGGILAGIL 215
F + G+ LGH+GG L G++
Sbjct: 292 FTIRGIDNLGHIGGFLGGLI 311
>gi|224132770|ref|XP_002327876.1| predicted protein [Populus trichocarpa]
gi|222837285|gb|EEE75664.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 152 AVGFSGVLFAMKVVLNSRS-EDYTNVHGLL-VPARYAAWAELIIIQMFVPGVSFLGHLGG 209
AVG+S V+F +L+ + ++ G L +P +A + LI + VP SFLGHL G
Sbjct: 59 AVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSG 118
Query: 210 ILAG 213
I+ G
Sbjct: 119 IVVG 122
>gi|268637931|ref|XP_002649151.1| rhomboid family protein [Dictyostelium discoideum AX4]
gi|256012943|gb|EEU04099.1| rhomboid family protein [Dictyostelium discoideum AX4]
Length = 489
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
RFF F H H NM++ L G+QLE + G + + + L G++ + S
Sbjct: 295 RFFTPIFLHVGIFHYLMNMVTQLRVGMQLERAYGGHRIVPIYL-LCGVAGNLC-----SA 348
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLN--SRSEDYTNVHGLLVPARYAAWAELIIIQ 195
++ + + S GF GVL ++ N ++ + N LL + +
Sbjct: 349 IMLPNSVQVGASGAIFGFLGVLLT-DLIRNWSVLAKPWLNFGSLLFSIITS-----FAVG 402
Query: 196 MFVPGVSFLGHLGGILAGIL 215
+F+PGV HLGG +AGIL
Sbjct: 403 LFLPGVDNFAHLGGFIAGIL 422
>gi|124003019|ref|ZP_01687870.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
gi|123991669|gb|EAY31077.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
Length = 219
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGS 112
FNP++I K+ RF S F H +HL +NM++L + Q+E G+
Sbjct: 40 FNPYIIESRKEYYRFLSSGFIHGGSTHLLFNMLTLFFFARQVELIYGA 87
>gi|386739372|ref|YP_006212552.1| rhomboid family protein [Corynebacterium pseudotuberculosis 31]
gi|387137634|ref|YP_005693613.1| rhomboid family protein [Corynebacterium pseudotuberculosis CIP
52.97]
gi|349734112|gb|AEQ05590.1| Rhomboid family protein [Corynebacterium pseudotuberculosis CIP
52.97]
gi|384476066|gb|AFH89862.1| Rhomboid family protein [Corynebacterium pseudotuberculosis 31]
Length = 256
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFL-DSLVPSIHEVWFNPHLILKYKDLK------RFFLSPF 84
+ PVT L + +I+L AF S+ ++++ W H IL ++ R S F
Sbjct: 20 QAPVTVLLSLSTLIIFLITAFQSQSITDNLYDSWIGTHWILYTPEMHEPLGMLRAIGSMF 79
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H HL N+ L + G ++E +GS F A + I+ L A +++ D
Sbjct: 80 LHIGPGHLAINIFLLFFLGREIEQCIGSALFCA--------AYFISGLGASLMIMIMDPL 131
Query: 145 RAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ M +++ T++ L+ LI VS
Sbjct: 132 SP-----TAGASGAIYGLMAIMVAIAITRKTDIRAPLILVAVNVGYSLI-----ADNVSL 181
Query: 204 LGHLGGILAG 213
GH+GG++AG
Sbjct: 182 WGHIGGLVAG 191
>gi|385805593|ref|YP_005841991.1| peptidase, family S54 [Fervidicoccus fontis Kam940]
gi|383795456|gb|AFH42539.1| peptidase, family S54 [Fervidicoccus fontis Kam940]
Length = 472
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 36 TAALLATNTLIYLRPAF----LDSLVPSIHEVWFNPHLILK--YKDLKRFFLSPFYHASE 89
T +L+ N ++Y+ ++ L S SI+++ F P ++L+ + + R F S F HA+
Sbjct: 43 TYSLILINIIVYVYTSYNNLLLTSTNESIYKLGFIPQILLEDPVQGVLRIFTSMFTHANI 102
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEF 115
H+F+NM L G +E ++G F
Sbjct: 103 FHIFFNMYFLWIFGRSVENAIGHKRF 128
>gi|315638293|ref|ZP_07893474.1| rhomboid family protein [Campylobacter upsaliensis JV21]
gi|315481640|gb|EFU72263.1| rhomboid family protein [Campylobacter upsaliensis JV21]
Length = 178
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 28/187 (14%)
Query: 35 VTAALLATNTLIY-LRPAFLDSLVPSIHEVWFNPHLILKYKD-LKRFFLSPFYHASESHL 92
+T AL+ N LI+ L+ F D+ + +++F+ +L+ ++ L + S F H + +HL
Sbjct: 2 ITWALIILNGLIFILQTWFFDT---DLFDLYFSLNLLFFEENFLWQPLSSMFLHGNFTHL 58
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
NM+ L G LE+ MGS +F ALL G+ L + L F +E +
Sbjct: 59 VLNMIVLFSFGRILESYMGSLKF-----ALLYFVGGLITSLLSAFYLLFAFEFWGQKIFL 113
Query: 153 VGFSGVLFAMKVVLNSRS-EDYTNVHGLLVPARYAAWAELIIIQMFVP-----GVSFLGH 206
VG SG A+ V++ + D T+ GL+V I++ F+P V++ GH
Sbjct: 114 VGASG---AICVLMGFYAFLDKTSTKGLVVA---------ILLMSFLPLFMGINVAWYGH 161
Query: 207 LGGILAG 213
+ G ++G
Sbjct: 162 IFGFMSG 168
>gi|419967548|ref|ZP_14483436.1| rhomboid family protein [Rhodococcus opacus M213]
gi|424859689|ref|ZP_18283671.1| rhomboid family protein [Rhodococcus opacus PD630]
gi|356661133|gb|EHI41465.1| rhomboid family protein [Rhodococcus opacus PD630]
gi|414567056|gb|EKT77861.1| rhomboid family protein [Rhodococcus opacus M213]
Length = 305
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 75/194 (38%), Gaps = 37/194 (19%)
Query: 33 PPVTAALLATNTLIYL------RPAFLDSLVPSIHEVW--FNPHLILKYKDLKRFFLSPF 84
P VT L+A N I+L R + + W F P ++ + R S F
Sbjct: 81 PLVTYILMAVNVGIFLITAAQSRSIMQNQAGSKLFADWALFPPAVV--DGQIVRVLGSGF 138
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
H HL NM +L G E +G +A + V+LLG S + L
Sbjct: 139 LHFGIIHLAVNMFALWVIGRDTELVLGRARYACVYFVSLLGGSAAVMLF----------- 187
Query: 144 ERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
G SG +F A V+L V ++ A +II + +P
Sbjct: 188 ---QLGAVTAGASGAVFGLMGAQAVILLRLRRSPAPVISVI--------AVNVIISITIP 236
Query: 200 GVSFLGHLGGILAG 213
G+S GHLGG++AG
Sbjct: 237 GISLWGHLGGLVAG 250
>gi|159485784|ref|XP_001700924.1| rhomboid-like protease [Chlamydomonas reinhardtii]
gi|158281423|gb|EDP07178.1| rhomboid-like protease [Chlamydomonas reinhardtii]
Length = 440
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFY 94
VT LA N YL S+V ++ + PH + + + R + F H HL
Sbjct: 235 VTNLFLAINVATYLVARTDRSVVLAMAAI---PHEVAR-GEWHRLLTAGFLHTDFLHLLS 290
Query: 95 NMMSLLWKGIQLETSMGSNEFAAM 118
NM++L W G LE++ G FAA+
Sbjct: 291 NMLALHWLGPDLESAAGRGRFAAI 314
>gi|148657883|ref|YP_001278088.1| rhomboid family protein [Roseiflexus sp. RS-1]
gi|148569993|gb|ABQ92138.1| Rhomboid family protein [Roseiflexus sp. RS-1]
Length = 283
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 28 RLPWKPPVTAALLAT-NTLIYLRPAFLDSL------VPSIHEVWFNPHLILKYKD----- 75
R+P P A +L T N L+++ P LD + V S++E+ LI K+
Sbjct: 39 RVPLFTPWAARILLTINILVFVGPWLLDVIGIRIAGVVSVYEL----TLIWGAKENAAIS 94
Query: 76 ----LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITL 131
RF + F H S +HLF+N +L G + E GS F A+ + + G+ G+
Sbjct: 95 IGGQYYRFLTAMFLHGSIAHLFFNSFALYSLGFEAERIFGSQRFLALYL-IAGLGGGVM- 152
Query: 132 LLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
A+ +VG SG +F + L + +V G + + + +
Sbjct: 153 ------------SYAFNPNPSVGASGAIFGLIGALIAFYVVARSVLGGIARQQLGSLIFV 200
Query: 192 IIIQMFV----PGVSFLGHLGGILAG 213
++I + + P + H+GG+L G
Sbjct: 201 VMINLALGFTSPYIDNNAHIGGLLTG 226
>gi|379714304|ref|YP_005302641.1| rhomboid family protein [Corynebacterium pseudotuberculosis 316]
gi|377653010|gb|AFB71359.1| Rhomboid family protein [Corynebacterium pseudotuberculosis 316]
Length = 249
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 32 KPPVTAALLATNTLIYLRPAFL-DSLVPSIHEVWFNPHLILKYKDLK------RFFLSPF 84
+ PVT L + +I+L AF S+ ++++ W H IL ++ R S F
Sbjct: 13 QAPVTVLLSLSTLIIFLITAFQSQSITDNLYDSWIGTHWILYTPEMHEPLGMLRAIGSMF 72
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H HL N+ L + G ++E +GS F A + I+ L A +++ D
Sbjct: 73 LHIGPGHLAINIFLLFFLGREIEQCIGSALFCA--------AYFISGLGASLMIMIMDPL 124
Query: 145 RAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG ++ M +++ T++ L+ LI VS
Sbjct: 125 SP-----TAGASGAIYGLMAIMVAIAITRKTDIRAPLILVAVNVGYSLI-----ADNVSL 174
Query: 204 LGHLGGILAG 213
GH+GG++AG
Sbjct: 175 WGHIGGLVAG 184
>gi|452842369|gb|EME44305.1| hypothetical protein DOTSEDRAFT_71968 [Dothistroma septosporum
NZE10]
Length = 616
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 264 GSDTRRTAPI-IWRCPACTFDNSGWLSICEMCGTS-RSGNDL 303
G DT TAP+ +CP CTF N L+ CE+CG S R G DL
Sbjct: 218 GRDTS-TAPVPAGQCPRCTFRNHPSLTSCEVCGASLRGGTDL 258
>gi|218187509|gb|EEC69936.1| hypothetical protein OsI_00380 [Oryza sativa Indica Group]
Length = 428
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 56/147 (38%), Gaps = 33/147 (22%)
Query: 16 PLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKD 75
P L AF Y P P +A LL A S V + HE W
Sbjct: 127 PELGRFAFQSYKENPLIGPSSATLLKMG-------ALETSKVTNDHEGW----------- 168
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R + HA H+ NM+SLL GI+LE EF M + L + G+ L
Sbjct: 169 --RLITCIWLHAGVVHILANMLSLLLIGIRLE-----KEFGFMRIGTLYVISGVGGSLLS 221
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAM 162
+L + S +VG SG LF +
Sbjct: 222 ALFMV--------SNISVGASGALFGL 240
>gi|397733720|ref|ZP_10500434.1| rhomboid family protein [Rhodococcus sp. JVH1]
gi|396930518|gb|EJI97713.1| rhomboid family protein [Rhodococcus sp. JVH1]
Length = 305
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 74/190 (38%), Gaps = 27/190 (14%)
Query: 32 KPPVTAALLATNTLIYL------RPAFLDSLVPSIHEVW--FNPHLILKYKDLKRFFLSP 83
P VT L+A N I+L R + + W F P ++ + R S
Sbjct: 80 TPLVTYILMAANVGIFLITAAQSRSIMQNQAGSKLFADWALFPPAVV--DGQIVRVLGSG 137
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL NM +L G E +G +A + A +LL + V+ F
Sbjct: 138 FLHFGIIHLAVNMFALWVIGRDTELVLGRARYACVYFA--------SLLGGSAAVMLFQL 189
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
F G++ A V+L V ++ A +II + +PG+S
Sbjct: 190 GAVTAGASGAVF-GLMGAQAVILLRLRRSPAPVISVI--------AINVIISITIPGISL 240
Query: 204 LGHLGGILAG 213
GHLGG++AG
Sbjct: 241 WGHLGGLVAG 250
>gi|323694355|ref|ZP_08108528.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
gi|323501595|gb|EGB17484.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
Length = 209
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPH------LILKYKDLKRFFLSPFY 85
K V A++A N + +L FL+ S++ + LIL+Y + R S F
Sbjct: 7 KAYVNGAIIAVNIIYFL---FLEITGSSLNTGFMVKRGAMYAPLILQYGEYYRLLTSVFM 63
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
H HL NM+ L G LE ++G ++ + L G+ A + L + R
Sbjct: 64 HFGIGHLINNMLVLFVLGDNLERALGKVKYLIFYL-LCGIG-------ANIISLAVNMGR 115
Query: 146 AYYSEYAVGFSGVLFAM------KVVLN-SRSEDYTNVHGLLVPAR--YAAWAELIIIQM 196
YY A G SG +F + V +N R ED + +++ A Y +
Sbjct: 116 GYYVVSA-GASGAIFGVVGGLVYAVAVNRGRLEDLSTQQLMILVAVTLYHGFTS------ 168
Query: 197 FVPGVSFLGHLGGILAGI 214
GV + H+GG+L GI
Sbjct: 169 --TGVDNVAHVGGLLIGI 184
>gi|195438966|ref|XP_002067402.1| GK16404 [Drosophila willistoni]
gi|194163487|gb|EDW78388.1| GK16404 [Drosophila willistoni]
Length = 1723
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRS-GNDLSSDQLSRHS 312
W+CPACT++N +C++C + R N + +D L+R S
Sbjct: 1060 WQCPACTYENCAASVVCDICSSPRGLVNAVLTDALARKS 1098
>gi|124266322|ref|YP_001020326.1| integral membrane protein [Methylibium petroleiphilum PM1]
gi|124259097|gb|ABM94091.1| integral membrane protein [Methylibium petroleiphilum PM1]
Length = 196
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSP 83
+P PP+T AL+ N ++ FL + +W F P + Y
Sbjct: 1 MPPLPPITQALILINVAVFCLDQFLGMWFTRLFALWPLGGGFMPWQVASYA--------- 51
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFA 116
F H HLF+NM+ L G +LE G+ F
Sbjct: 52 FLHGGIGHLFFNMLGLWMFGAELERLWGTKRFV 84
>gi|409386424|ref|ZP_11238834.1| GlpG protein (membrane protein of glp regulon) [Lactococcus
raffinolactis 4877]
gi|399206351|emb|CCK19749.1| GlpG protein (membrane protein of glp regulon) [Lactococcus
raffinolactis 4877]
Length = 227
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
F P LI L R F H H N SL++ G Q+E GS F +V+ LL
Sbjct: 49 FGPDLIEHPTHLWRLVTPIFVHIGWEHFLLNFFSLIFIGRQIEDVFGSRRF--LVIYLLS 106
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVV----LNSRSEDYTNVHGLL 180
G +++ FF + + G+ AM ++ N + +L
Sbjct: 107 GIFG-------NILAFFVQPNILLAGASTSLFGIFGAMAMLGYLTKNPSFQAVGKQFAVL 159
Query: 181 VPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
+ A ++I +F P V GH+GG L G+L
Sbjct: 160 ILAN-------LVINLFQPAVGIFGHIGGALGGVL 187
>gi|297200957|ref|ZP_06918354.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197712264|gb|EDY56298.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 294
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 24/165 (14%)
Query: 55 SLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNE 114
SLV + F P + R S F H H+ +NMMSL W G LE ++G
Sbjct: 110 SLVGAWPPAPFQPTEGVADGQYYRLVTSMFAHQEIWHIGFNMMSLWWLGGPLEAALGRAR 169
Query: 115 FAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRS 170
+ V + G++ G Y A S +G SG +F A V++ +
Sbjct: 170 YLT-VYFVSGLAGGA-----------LAYLLASPSTATLGASGAIFGLFGATAVLMRRLN 217
Query: 171 EDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
D + LLV +I G+S+ H+GG++AG++
Sbjct: 218 YDLRPIIALLVIN--------LIFTFSWSGISWQAHIGGLVAGLI 254
>gi|256425736|ref|YP_003126389.1| rhomboid family protein [Chitinophaga pinensis DSM 2588]
gi|256040644|gb|ACU64188.1| Rhomboid family protein [Chitinophaga pinensis DSM 2588]
Length = 280
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
F IL KD KR S F H S HLF+NM+SL LE +G + + A L
Sbjct: 34 FEVDRILIEKDYKRLITSGFLHVSWMHLFFNMVSLFLFSNSLEVKLGPTAYLTLYFASLV 93
Query: 125 MSQGITLLLAKS 136
++LL+ ++
Sbjct: 94 GGNLLSLLIHRN 105
>gi|222617736|gb|EEE53868.1| hypothetical protein OsJ_00361 [Oryza sativa Japonica Group]
Length = 335
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 56/147 (38%), Gaps = 33/147 (22%)
Query: 16 PLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKD 75
P L AF Y P P +A LL A S V + HE W
Sbjct: 34 PELGRFAFQSYKENPLIGPSSATLLKMG-------ALETSKVTNDHEGW----------- 75
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R + HA H+ NM+SLL GI+LE EF M + L + G+ L
Sbjct: 76 --RLITCIWLHAGVVHILANMLSLLLIGIRLE-----KEFGFMRIGTLYVISGVGGSLLS 128
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAM 162
+L + S +VG SG LF +
Sbjct: 129 ALFMV--------SNISVGASGALFGL 147
>gi|260833574|ref|XP_002611732.1| hypothetical protein BRAFLDRAFT_98697 [Branchiostoma floridae]
gi|229297103|gb|EEN67742.1| hypothetical protein BRAFLDRAFT_98697 [Branchiostoma floridae]
Length = 981
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 5/33 (15%)
Query: 265 SDTRRTAPIIWRCPACTFDNSGWLSICEMCGTS 297
SD+ R WRC CT+DNS + +C+MCGT+
Sbjct: 275 SDSER-----WRCKKCTYDNSRKVRVCKMCGTA 302
>gi|384107096|ref|ZP_10007998.1| rhomboid family protein [Rhodococcus imtechensis RKJ300]
gi|383833031|gb|EID72500.1| rhomboid family protein [Rhodococcus imtechensis RKJ300]
Length = 305
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 75/194 (38%), Gaps = 37/194 (19%)
Query: 33 PPVTAALLATNTLIYL------RPAFLDSLVPSIHEVW--FNPHLILKYKDLKRFFLSPF 84
P VT L+A N I+L R + + W F P ++ + R S F
Sbjct: 81 PLVTYILMAVNVGIFLITAAQSRSIMQNQAGSKLFADWALFPPAVV--DGQIVRVLGSGF 138
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
H HL NM +L G E +G +A + V+LLG S + L
Sbjct: 139 LHFGIIHLAVNMFALWVIGRDTELVLGRARYACVYFVSLLGGSAAVMLF----------- 187
Query: 144 ERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
G SG +F A V+L V ++ A +II + +P
Sbjct: 188 ---QLGAVTAGASGAVFGLMGAQAVILLRLRRSPAPVISVI--------AVNVIISITIP 236
Query: 200 GVSFLGHLGGILAG 213
G+S GHLGG++AG
Sbjct: 237 GISLWGHLGGLVAG 250
>gi|296118375|ref|ZP_06836955.1| rhomboid family protein [Corynebacterium ammoniagenes DSM 20306]
gi|295968653|gb|EFG81898.1| rhomboid family protein [Corynebacterium ammoniagenes DSM 20306]
Length = 217
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL NM+ LL G ++E G+ F A+ ++ +S G+ L+L D+
Sbjct: 70 FMHLDIGHLTVNMIMLLLIGREVERHFGTKLFVALYISA-AISSGL-------LILTLDF 121
Query: 144 ERAYYSEYAVGFSGVLFAMKVVL----NSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
G SG LFA+ V+L SR D + A ++
Sbjct: 122 MAP-----TAGASGALFALMVLLISVYRSRGAD--------LRAPTVLVVVNVVYTFITT 168
Query: 200 GVSFLGHLGGILAGIL 215
GVS GHLGG+ AG++
Sbjct: 169 GVSLWGHLGGLFAGVI 184
>gi|270307582|ref|YP_003329640.1| rhomboid [Dehalococcoides sp. VS]
gi|270153474|gb|ACZ61312.1| rhomboid [Dehalococcoides sp. VS]
Length = 190
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
S F HA HLF NM++L + G L + N+ + +++ G LA SL+ F
Sbjct: 54 SLFVHADLWHLFANMITLYFFGNALLQMI--NQRSWLIIFFGGG-------LAGSLL--F 102
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELI---IIQMFV 198
A Y +G SG +FA+ L + + V +P W +I II F+
Sbjct: 103 ILLNAGSFGYVIGASGAVFALGGTLAVLRPN-SKVMVFPLPVPIPLWIAVIGSFIILSFL 161
Query: 199 PGVSFLGHLGGILAG 213
P V++ GHLGG+L G
Sbjct: 162 PSVAWQGHLGGLLVG 176
>gi|429963069|gb|ELA42613.1| hypothetical protein VICG_00365 [Vittaforma corneae ATCC 50505]
Length = 478
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRS 299
W C ACT+ N + ++CEMCGTS+
Sbjct: 454 WNCSACTYLNQPFNTLCEMCGTSKE 478
>gi|389774391|ref|ZP_10192510.1| hypothetical protein UU7_01252 [Rhodanobacter spathiphylli B39]
gi|388437990|gb|EIL94745.1| hypothetical protein UU7_01252 [Rhodanobacter spathiphylli B39]
Length = 204
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 21/195 (10%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHL 92
PPVT LL N ++L + ++ +W L + + S F H S +H+
Sbjct: 6 PPVTRNLLIANVAVFLLQQVMGQVLLLNFALW---PLGSGLFGVWQIVTSAFMHGSLTHI 62
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+NM++L G +E + G+ F + + +S LL +++ FF +
Sbjct: 63 AFNMIALYMFGGTIERTFGARNF-TLYYFVCAISAS---LLQLAVLWFFPGQVG----PT 114
Query: 153 VGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAW--------AELII-IQMFVPGVSF 203
+G SG +F + + V + +P AW AEL + + PGV+
Sbjct: 115 LGASGAIFGLLLAFGVLYPQ-EKVMLIFLPIPMPAWLFVSLYAAAELTMGVTGIEPGVAH 173
Query: 204 LGHLGGILAGILYLK 218
HLGG+L GI+ ++
Sbjct: 174 FAHLGGMLGGIVLIQ 188
>gi|54290319|dbj|BAD61123.1| putative membrane protein [Oryza sativa Japonica Group]
gi|54290396|dbj|BAD61266.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 56/147 (38%), Gaps = 33/147 (22%)
Query: 16 PLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKD 75
P L AF Y P P +A LL A S V + HE W
Sbjct: 122 PELGRFAFQSYKENPLIGPSSATLLKMG-------ALETSKVTNDHEGW----------- 163
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R + HA H+ NM+SLL GI+LE EF M + L + G+ L
Sbjct: 164 --RLITCIWLHAGVVHILANMLSLLLIGIRLE-----KEFGFMRIGTLYVISGVGGSLLS 216
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLFAM 162
+L + S +VG SG LF +
Sbjct: 217 ALFMV--------SNISVGASGALFGL 235
>gi|367009458|ref|XP_003679230.1| hypothetical protein TDEL_0A06870 [Torulaspora delbrueckii]
gi|359746887|emb|CCE90019.1| hypothetical protein TDEL_0A06870 [Torulaspora delbrueckii]
Length = 267
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Query: 54 DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSN 113
+ ++P + +P + L + P H S HLF+N++SL+ E+ G+
Sbjct: 32 NKIIPIFDAMTLSPQSMFNIGRLSNY---PLAHLSFFHLFFNVISLMGPLNLFESQHGT- 87
Query: 114 EFAAMVVALLGMSQGITLLLAKSL--VLFFDYERAYYSEYAV-GFSGVLFAMKVVLN-SR 169
+ G+ L LA + +L+ + R Y + +V G SG F M
Sbjct: 88 -----------VHTGVVLNLAAVITGLLYCLFGRLAYPDASVAGASGWCFTMFGYFGLKE 136
Query: 170 SEDYTNVH----GLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAG 213
S + H P + LI+I +FVPGVSF GH ++ G
Sbjct: 137 SALHPRYHIPGSNFAFPTVLSPLVLLILISIFVPGVSFWGHFFALMVG 184
>gi|358447564|ref|ZP_09158084.1| rhomboid family protein [Corynebacterium casei UCMA 3821]
gi|356606496|emb|CCE56455.1| rhomboid family protein [Corynebacterium casei UCMA 3821]
Length = 217
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL NM L+ G ++E G+ F A+ ++ +S G+ L+L D+
Sbjct: 70 FMHLDIGHLTVNMFMLMLIGREVERHFGTVLFVALYISA-AISSGL-------LILTLDF 121
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
G SG LFA+ V+L S G + A A +I GVS
Sbjct: 122 MSP-----TAGASGALFALMVLLVSVYRS----RGADLRAPIVLVAVNVIYTFISAGVSL 172
Query: 204 LGHLGGILAGIL 215
GHLGG+ AGI+
Sbjct: 173 WGHLGGLFAGII 184
>gi|424791297|ref|ZP_18217756.1| Rhomboid family membrane protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422797604|gb|EKU25836.1| Rhomboid family membrane protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 219
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 29/208 (13%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFL--DSLVPSIHEVW-------FNPHLILKYKDLKRF 79
P PPVT ALL N ++L L DS P + +W F+P + L +
Sbjct: 2 FPRLPPVTQALLIGNVAVFLLQLLLGDDSFAPFM--LWPISNFDAFSPGQNFQIWQLLTY 59
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F H SHL +NM++L G LE + G+ F + + + L + LV
Sbjct: 60 ---GFLHGGFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVAGAG-----LCQVLVG 111
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAA------WAELII 193
++ +G SG +F + + + V L P A + L +
Sbjct: 112 WWTVSNGGDPYPTLGASGGVFGLLLAFGMLFPN-QRVMLLFPPIPMKARTFVIVFGALEL 170
Query: 194 IQMFV---PGVSFLGHLGGILAGILYLK 218
I F PGV+ HLGG+L G L ++
Sbjct: 171 IMGFTGWQPGVAHFAHLGGMLFGWLLIR 198
>gi|417850304|ref|ZP_12496214.1| peptidase, S54 family [Streptococcus mitis SK1080]
gi|339452888|gb|EGP65508.1| peptidase, S54 family [Streptococcus mitis SK1080]
Length = 224
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
+ P + L + + RFF + F H H NM+SL + G Q+E GS +F + + L G
Sbjct: 47 YGPAIRLFPEQVWRFFSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKQFFFLYL-LSG 105
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR 184
M +L +F ++ + + G+ A+ V+ + Y G +
Sbjct: 106 M--------MGNLFVFVFSPKSLAAGASTSLYGLFAAIIVLRYATRNPYIQQLG---QSY 154
Query: 185 YAAWAELIIIQMFVPGVSFLGHLGGILAG 213
+ II + +PG+S GH+GG + G
Sbjct: 155 LTLFVVNIIGSVLIPGISLAGHIGGAVGG 183
>gi|325923383|ref|ZP_08185053.1| uncharacterized membrane protein [Xanthomonas gardneri ATCC 19865]
gi|325546153|gb|EGD17337.1| uncharacterized membrane protein [Xanthomonas gardneri ATCC 19865]
Length = 241
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 90/228 (39%), Gaps = 51/228 (22%)
Query: 29 LPWKPPVTAALLATNT-LIYLRPAFLDSLVPSIHE--------VW--------------F 65
+P PPVT ALL N L L+ A D +H +W F
Sbjct: 11 MPQLPPVTKALLIANIGLFLLQWALGDLGAGVLHSDAALSSLMLWPISNGFDAFSPGASF 70
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
P +L Y F H +HLF+NM++L G LE + G F + +
Sbjct: 71 MPWQLLTYA---------FLHGGFNHLFFNMLALFMFGAALEQTWGQKRFLTYYLVCVAG 121
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
+ LL+A +F A + G G+L A ++ ++ V L P
Sbjct: 122 AGVCQLLMA-----WFTQSGAPVVGASGGVFGLLLAYGMLFPNQ-----RVMLLFPPIPM 171
Query: 186 AAWAELII---IQMFV------PGVSFLGHLGGILAGILYLKLKGGYS 224
A +I+ I++F+ PGV+ HLGG+L G L ++ G S
Sbjct: 172 KARTFVIVFGAIELFLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQS 219
>gi|328866134|gb|EGG14520.1| beta-lactamase family protein [Dictyostelium fasciculatum]
Length = 490
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 70 ILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGI 129
++ Y + RFF F H HL N+ + L G+QLE S G++ + + G+
Sbjct: 285 LILYGEWWRFFSPIFLHVGIFHLLMNLGTQLRIGMQLERSYGAHRIVPIYLLC-----GV 339
Query: 130 TLLLAKSLVLFFDYERAYYSEYAVGFSGVLFA-MKVVLNSRSEDYTNVHGLLVPARYAAW 188
L S+ L + S GF GVL A + ++ + Y N L+ +
Sbjct: 340 MGNLCSSIFLPLSVQVG-ASGSIFGFLGVLLADLARNWSALASPYLNCCSLVFTIITS-- 396
Query: 189 AELIIIQMFVPGVSFLGHLGGILAGIL 215
+ +F+PGV H GG + GIL
Sbjct: 397 ---FAVGLFLPGVDNFAHFGGFVMGIL 420
>gi|304384713|ref|ZP_07367059.1| rhomboid family integral membrane protein [Pediococcus acidilactici
DSM 20284]
gi|418068986|ref|ZP_12706266.1| membrane-associated serine protease [Pediococcus acidilactici
MA18/5M]
gi|304328907|gb|EFL96127.1| rhomboid family integral membrane protein [Pediococcus acidilactici
DSM 20284]
gi|357537719|gb|EHJ21742.1| membrane-associated serine protease [Pediococcus acidilactici
MA18/5M]
Length = 229
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 33 PPVTAALLATNTLIYL----RPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
P +T L+A N L+YL D V H P +I F S F H
Sbjct: 15 PFMTITLVALNVLVYLWLTLAGGSTDLTVLVTHGAMV-PAMIKDGAGWASLFTSMFVHIG 73
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
HL +NM++L + G LE +G F +++ LL GI A + L F A
Sbjct: 74 FEHLLFNMITLYFIGRLLEQVIGHGRF--LLIYLL---SGI---FANVVSLAF----AAP 121
Query: 149 SEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR----YAAWAELIIIQMFVPGVSFL 204
+ + G SG +F + V +E Y N L R ++A I+ MF +
Sbjct: 122 NSISAGASGAIFGIIGVWIMMAEQYRNYPFLAGMGRQMLIFSALG--IVSGMFGTNIDIF 179
Query: 205 GHLGGILAGILYLKLKGGYSGSDP 228
HLGG++AG L GY S P
Sbjct: 180 AHLGGLVAGFLL-----GYGFSFP 198
>gi|103486476|ref|YP_616037.1| rhomboid-like protein [Sphingopyxis alaskensis RB2256]
gi|98976553|gb|ABF52704.1| Rhomboid-like protein [Sphingopyxis alaskensis RB2256]
Length = 211
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 65 FNPHLILKYKDLKRFFLSP----FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV 120
F LIL L F L+P F H H+ +NM+ LL+ G QLE +G+ A +++
Sbjct: 43 FGQELILPPGTLVPFVLTPLTSAFLHGGVLHIAFNMVVLLFIGRQLEAPLGTKAMAVLLL 102
Query: 121 A 121
A
Sbjct: 103 A 103
>gi|58582905|ref|YP_201921.1| hypothetical protein XOO3282 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58427499|gb|AAW76536.1| integral membrane protein [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 260
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 95/241 (39%), Gaps = 51/241 (21%)
Query: 16 PLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSL---------VPSIHEVW-- 64
P + + + + +P PP+T ALL N ++L + L V S +W
Sbjct: 16 PTVIIGSIPKDAAMPQLPPITKALLIANIGLFLLQWAVGDLSAGVLPSDSVLSWLMLWPL 75
Query: 65 ------------FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGS 112
F P +L Y F H +HLF+NM++L G LE + G
Sbjct: 76 SNGFDAFSPGASFMPWQLLTYA---------FLHGGFNHLFFNMLALFMFGAPLEQTWGQ 126
Query: 113 NEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED 172
F + + + LL+A +F A + G G+L A ++ ++
Sbjct: 127 KRFLTYYLVCVAGAGVCQLLIA-----WFTQSGAPVVGASGGVFGLLLAYGMLFPNQ--- 178
Query: 173 YTNVHGLLVPARYAAWAELII---IQMFV------PGVSFLGHLGGILAGILYLKLKGGY 223
V L P A +I+ I++F+ PGV+ HLGG+L G L ++ G
Sbjct: 179 --RVMLLFPPIPMKARTFVIVFGAIELFLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQ 236
Query: 224 S 224
S
Sbjct: 237 S 237
>gi|304382432|ref|ZP_07364931.1| rhomboid family protein [Prevotella marshii DSM 16973]
gi|304336440|gb|EFM02677.1| rhomboid family protein [Prevotella marshii DSM 16973]
Length = 316
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 48/223 (21%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRF-----FLSPFYHA 87
P +T LL N L+ FL + V I + N L L + F F F H
Sbjct: 10 PTITKNLLIINVLV-----FLAAYVLGIRGIDLNGLLGLHFFPASHFGIYQLFTYLFMHG 64
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
+HLF+NM +L G +E + G +F +A G+ L + + F +
Sbjct: 65 GWAHLFFNMFALWMFGCVVENAWGPKKFLFYYIAC-----GVGAGLLQEVAQFVQFYVLI 119
Query: 148 YSEYA-VGFSGVLFAMKVVLNSRSEDYTNV------------HGLLVPAR---------- 184
+YA V FS V F + ++S+ +T V G++ P +
Sbjct: 120 SDQYAGVSFSDV-FHIAQSMSSQLNGWTTVGASGAVYGILLAFGMIYPEQRIFVFPLPIP 178
Query: 185 -YAAWAELII--IQMF------VPGVSFLGHLGGILAGILYLK 218
A W +I I++F GV+ HLGG+L G +K
Sbjct: 179 IKAKWFVMIYAGIELFSALGTSSDGVAHFAHLGGMLFGYFMIK 221
>gi|194337873|ref|YP_002019667.1| rhomboid family protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194310350|gb|ACF45050.1| Rhomboid family protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 273
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 29/202 (14%)
Query: 33 PPVTAALLATNTLIYLRPAF--LDSLVPSIHEVW-FNPHLILKYKDLKRFFLSPFYHASE 89
PP ++ N ++L F L +++ ++ +W ++ L FL H +
Sbjct: 17 PPAIKTIIIINVAVFLLQFFTPLGAIIQALGALWPIGSSNFQLWQPLTYMFL----HGNG 72
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
+HLF+NM +L G ++E G+ +F G+ I LLA Y +
Sbjct: 73 THLFFNMFALWMFGAEIENQWGTRQFNIYYFT-CGIGAAIINLLA-------TIGDPYPT 124
Query: 150 EYAVG-FSGVLFAMKVVLNSRSEDYTNVHGLL-VPARY--AAWAELIIIQMF-------V 198
A G GVL A ++ +R Y ++ L V A+Y A +A + I F
Sbjct: 125 VGASGAIYGVLLAFGMMFPNR---YIFLYFLFPVKAKYFIAGYALIEFISGFGSRAMGSG 181
Query: 199 PGVSFLGHLGGILAGILYLKLK 220
V+ HLGG+L G +Y+ +K
Sbjct: 182 SNVAHFAHLGGMLIGFIYITIK 203
>gi|418528432|ref|ZP_13094382.1| Rhomboid-like protein [Comamonas testosteroni ATCC 11996]
gi|371454808|gb|EHN67810.1| Rhomboid-like protein [Comamonas testosteroni ATCC 11996]
Length = 500
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F S F H S SHL NM+ L G LE ++G+ + A V I + A L
Sbjct: 163 FTSIFLHGSTSHLLGNMVFLFLFGFTLELALGAFTYLAFYV--------IGGIGASLFAL 214
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV- 198
F Y A G L AM V+ R + LL YA+W LI++ +++
Sbjct: 215 MFYAGMGGYGLGASGAISALMAMYAVMY-RMRRIRFFYMLLFYFNYASWPALIMLPVWMG 273
Query: 199 ----------PGVSFLGHLGGILAGIL----YLKLK 220
V+++ H GG+L G L Y++L+
Sbjct: 274 VELLQHLLGGKQVAYMAHFGGLLTGALLMWGYMRLQ 309
>gi|334335573|ref|YP_004540725.1| rhomboid family protein [Isoptericola variabilis 225]
gi|334105941|gb|AEG42831.1| Rhomboid family protein [Isoptericola variabilis 225]
Length = 292
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 78 RFFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT--LLL 133
RF + F H++ H+ +NM +L G LE +G F +V+ALL G LLL
Sbjct: 121 RFLTAAFLHSTSGVLHILFNMWALWITGQALEPLLGRGRF--VVLALLSAVGGSVGWLLL 178
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWA 189
A + +Y + VG SG++F A+ VL + LL A
Sbjct: 179 AGG-----PADGTWY-QGVVGASGMVFGLFGALIPVLRRMGGSARQIVVLL--------A 224
Query: 190 ELIIIQMFVPGVSFLGHLGGILAGI 214
+I VPG+++ HLGG++ G+
Sbjct: 225 INGVIGFVVPGIAWQAHLGGLVTGL 249
>gi|420236439|ref|ZP_14740922.1| hypothetical protein A200_01381 [Parascardovia denticolens IPLA
20019]
gi|391880266|gb|EIT88760.1| hypothetical protein A200_01381 [Parascardovia denticolens IPLA
20019]
Length = 266
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 22/140 (15%)
Query: 84 FYHASE-SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFD 142
F H+ + SH+F+NM+SL G+ LE +G EF A+ + + G+ + LL+ L
Sbjct: 98 FMHSIDISHIFFNMVSLYLAGLSLEKMLGHWEFLALYL-VSGLGASVAFLLSA---LASG 153
Query: 143 YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAE-------LIIIQ 195
A S +G SG +F + V L P R AW+ L++
Sbjct: 154 PSSAVAS--MIGASGAIFGLF--------GAMVVTALKSPGRQNAWSMVVFLGLILVVPM 203
Query: 196 MFVPGVSFLGHLGGILAGIL 215
+F GV++ HLGG G L
Sbjct: 204 LFGSGVAWQAHLGGFAVGAL 223
>gi|387793462|ref|YP_006258527.1| hypothetical protein Solca_4361 [Solitalea canadensis DSM 3403]
gi|379656295|gb|AFD09351.1| putative membrane protein [Solitalea canadensis DSM 3403]
Length = 297
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 26/200 (13%)
Query: 40 LATNTLIYLR-PAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMS 98
L+T + YL PA LD+L I + W F F H HL +NM+
Sbjct: 48 LSTKIVSYLAVPASLDAL---IKQPW-------------SLFTYMFLHEGFFHLLFNMLG 91
Query: 99 LLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGV 158
L W G LE +G +FA + + L G++ G +L + +F +E +G S
Sbjct: 92 LYWFGQLLEEYIGGKKFAWIYI-LGGLTGGALFILMFN--IFPAFENNALLPRTLGASAG 148
Query: 159 LFAMKVVLNSRSEDYTNVHGL--LVPARYAAWAELIIIQMFVPGVS---FLGHLGGILAG 213
+ A+ V + +Y + + LV +Y +++ + + G + + HLGG + G
Sbjct: 149 VLAIAVATATLLPNYQFMLFIFGLVKIKYIVLFFVLLDLINITGDNAGGHIAHLGGAILG 208
Query: 214 ILYLK-LKGGYSGSDPLTTI 232
Y+K L+ G S P +T+
Sbjct: 209 FCYVKQLRAGNDISSPFSTL 228
>gi|271961709|ref|YP_003335905.1| rhomboid-like protein [Streptosporangium roseum DSM 43021]
gi|270504884|gb|ACZ83162.1| rhomboid-like protein [Streptosporangium roseum DSM 43021]
Length = 291
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 39/195 (20%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVW--FNPHLILKYKDLKRFFLSPFYHASES 90
P VT ALL N L Y +SL PS+ + + H+ + + R F H S
Sbjct: 76 PRVTWALLIVNILAYAA----ESLSPSVVSAFQMSSGHVAFR-GEWWRLITGAFLHMPLS 130
Query: 91 -------HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFD 142
H+ +NM +L G +LE +GS F + +++ LG S I L
Sbjct: 131 AGGFALTHILFNMWALYAIGPELERRLGSLRFLVLYLLSALGGSVAIYL----------- 179
Query: 143 YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAW--AELIIIQMFVPG 200
+ AVG SG ++ M L S+ L AR W +++ VP
Sbjct: 180 -----FGIAAVGASGAIYGMFGALFVVSKK------LGYDARGVLWLIGINVVLTFTVPS 228
Query: 201 VSFLGHLGGILAGIL 215
+S+ GHLGG++ G +
Sbjct: 229 ISWQGHLGGLITGAI 243
>gi|451337929|ref|ZP_21908468.1| rhomboid family serine protease [Amycolatopsis azurea DSM 43854]
gi|449419521|gb|EMD25056.1| rhomboid family serine protease [Amycolatopsis azurea DSM 43854]
Length = 320
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 27/144 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R F S F H+ N SL + G LET++G F A+ V++LG S A +
Sbjct: 138 RIFTSGFLQYGLLHIASNAFSLWFVGRPLETALGRVPFTALYFVSMLGGS-------AAN 190
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAM-----KVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
LV F D + A VG SG +F + +V+ R N LLV
Sbjct: 191 LV-FTDLDAAP----VVGASGAIFGLIGAYTVIVIKLR----LNPSWLLVILGLN----- 236
Query: 192 IIIQMFVPGVSFLGHLGGILAGIL 215
+ I VPG+S L H GG +AG+L
Sbjct: 237 VFITFQVPGISILAHAGGFVAGLL 260
>gi|325188707|emb|CCA23237.1| HECT E3 ubiquitin ligase putative [Albugo laibachii Nc14]
Length = 2179
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 264 GSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSR 298
G+ + W C CTF N +L CEMC T R
Sbjct: 16 GTQSEMQTEDFWSCGTCTFQNESYLQYCEMCSTPR 50
>gi|408679359|ref|YP_006879186.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
gi|328883688|emb|CCA56927.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
Length = 294
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 29/191 (15%)
Query: 35 VTAALLATNTLIYLRP-AFLDSLVPSIHEVWF--NPHL--ILKYKDLK--RFFLSPFYHA 87
VT L+ N +YL F D LV + + + +P L ++ D + R S H
Sbjct: 83 VTKILIGVNLAVYLAVLVFGDRLVDELVLIGYAWSPALGEVVGVADGEWYRLLTSTVLHQ 142
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H+ +N++ L G +E +G +AA+ + L G+S + Y A
Sbjct: 143 EVWHILFNVLGLWVIGGIVEPELGRIRYAALCL-LSGLSGSV-----------LAYVVAE 190
Query: 148 YSEYAVGFSGVLFAMK---VVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
++ ++G SGV++ + VVL R L V A ++I PG+S+
Sbjct: 191 PNQPSLGASGVVYGLIGAWVVLARRRRHDMRPVILFV-------ALSLLITFTRPGISWE 243
Query: 205 GHLGGILAGIL 215
H+GG++AG+L
Sbjct: 244 AHVGGLVAGVL 254
>gi|406962194|gb|EKD88637.1| rhomboid family protein [uncultured bacterium]
Length = 215
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILK--YKDLKRFFLSPFYHASES 90
P VT AL+A N +++L L I+ F P L + L F S F HA
Sbjct: 15 PIVTYALIAINIIVFLLE--LRGGDAFIYAWSFIPLRFLSSPIEGLITLFTSMFLHAGWL 72
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL NM+ LL G +E G +F V L G++ G+ Y + +SE
Sbjct: 73 HLGGNMLYLLIFGDNVEDRFGHFKFLVFYV-LSGLAAGLA-----------QYAVSMFSE 120
Query: 151 YAV-----GFSGVLFAMKVVLNSR------SEDYTNVHGLLVPARYAAWAELIIIQMF-- 197
Y +GVL A V+ R + N+ LLV AW I+IQ+
Sbjct: 121 YPTLGASGAIAGVLAAYLVLFPGRRVRVLLAAWIVNLPALLV---IGAW---IVIQLVSG 174
Query: 198 ---------VPGVSFLGHLGGILAGIL 215
GV+++ H+GG +AG++
Sbjct: 175 LGTFSDSTATGGVAYMAHIGGFVAGLV 201
>gi|145329975|ref|NP_001077973.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|77999982|dbj|BAE46872.1| Rhomboid family protein AtRBL1 [Arabidopsis thaliana]
gi|330253109|gb|AEC08203.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 346
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 86/219 (39%), Gaps = 57/219 (26%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLKRFFLSPFYH 86
R ++P LL ++L + LD S+V HEVW R F + H
Sbjct: 93 RFAFQPMKENPLLGPSSLTLEKMGALDVSMVVHKHEVW-------------RLFTCIWLH 139
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
A H+ NM+SL++ GI+LE EF + + LL M G L SL + RA
Sbjct: 140 AGVFHVLANMLSLIFIGIRLE-----QEFGFVRIGLLYMISGFGGSLLSSL-----FNRA 189
Query: 147 YYSEYAVGFSGVLF-----------------AMKVVLNS-------RSEDYTNVHGLLVP 182
S VG SG LF A KV +S D + + + +
Sbjct: 190 GIS---VGASGALFGLLGAMLSELLTNWTIYANKVAKSSLVKQAALSMNDVSIMSLVFLH 246
Query: 183 ARYAAWAELIIIQMF------VPGVSFLGHLGGILAGIL 215
++AA LI I +P V HLGG +G L
Sbjct: 247 LQFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGFL 285
>gi|313886257|ref|ZP_07819986.1| peptidase, S54 family [Porphyromonas asaccharolytica PR426713P-I]
gi|332299847|ref|YP_004441768.1| rhomboid family protein [Porphyromonas asaccharolytica DSM 20707]
gi|312924328|gb|EFR35108.1| peptidase, S54 family [Porphyromonas asaccharolytica PR426713P-I]
gi|332176910|gb|AEE12600.1| Rhomboid family protein [Porphyromonas asaccharolytica DSM 20707]
Length = 239
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 20 LHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRF 79
+H+F+ R+ PPVT LL N + Y+ +VP + L L Y + F
Sbjct: 1 MHSFDTTPRIQ-IPPVTLNLLIINLIFYIA----QQVVPRT-GIDLTGLLGLHYVTAQGF 54
Query: 80 FL-SP----FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
+ P F H S +HLF+NM +L G+ +E + G+ F L + G+T L+
Sbjct: 55 HIWQPVTYMFLHGSFTHLFFNMFALFMFGVTIERTWGAQRF-----LLFYLVCGLTAALS 109
Query: 135 KSLV 138
+ LV
Sbjct: 110 QELV 113
>gi|84624764|ref|YP_452136.1| integral membrane protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368704|dbj|BAE69862.1| integral membrane protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 254
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 95/241 (39%), Gaps = 51/241 (21%)
Query: 16 PLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSL---------VPSIHEVW-- 64
P + + + + +P PP+T ALL N ++L + L V S +W
Sbjct: 10 PTVIIGSIPKDAAMPQLPPITKALLIANIGLFLLQWAVGDLSAGVLPSDSVLSWLMLWPL 69
Query: 65 ------------FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGS 112
F P +L Y F H +HLF+NM++L G LE + G
Sbjct: 70 SNGFDAFSPGASFMPWQLLTYA---------FLHGGFNHLFFNMLALFMFGAPLEQTWGQ 120
Query: 113 NEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED 172
F + + + LL+A +F A + G G+L A ++ ++
Sbjct: 121 KRFLTYYLVCVAGAGVCQLLIA-----WFTQSGAPVVGASGGVFGLLLAYGMLFPNQ--- 172
Query: 173 YTNVHGLLVPARYAAWAELII---IQMFV------PGVSFLGHLGGILAGILYLKLKGGY 223
V L P A +I+ I++F+ PGV+ HLGG+L G L ++ G
Sbjct: 173 --RVMLLFPPIPMKARTFVIVFGAIELFLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQ 230
Query: 224 S 224
S
Sbjct: 231 S 231
>gi|270290405|ref|ZP_06196630.1| membrane-associated serine protease [Pediococcus acidilactici 7_4]
gi|270281186|gb|EFA27019.1| membrane-associated serine protease [Pediococcus acidilactici 7_4]
Length = 222
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 33 PPVTAALLATNTLIYL----RPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
P +T L+A N L+YL D V H P +I F S F H
Sbjct: 8 PFMTITLVALNVLVYLWLTLAGGSTDLTVLVTHGAMV-PAMIKDGAGWASLFTSMFVHIG 66
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYY 148
HL +NM++L + G LE +G F +++ LL GI A + L F A
Sbjct: 67 FEHLLFNMITLYFIGRLLEQVIGHGRF--LLIYLL---SGI---FANVVSLAF----AAP 114
Query: 149 SEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR----YAAWAELIIIQMFVPGVSFL 204
+ + G SG +F + V +E Y N L R ++A I+ MF +
Sbjct: 115 NSISAGASGAIFGIIGVWIMMAEQYRNYPFLAGMGRQMLIFSALG--IVSGMFGTNIDIF 172
Query: 205 GHLGGILAGILYLKLKGGYSGSDP 228
HLGG++AG L GY S P
Sbjct: 173 AHLGGLVAGFLL-----GYGFSFP 191
>gi|145503155|ref|XP_001437555.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404705|emb|CAK70158.1| unnamed protein product [Paramecium tetraurelia]
Length = 277
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 25/172 (14%)
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
P +I +++ R F H S SH+ NMM ++ G LE + G V++L +
Sbjct: 86 TPSIIYRFQ-FWRLVCPIFLHGSFSHIIGNMMVQIYYGFILELTHGWKR-----VSILYI 139
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
GI L + +YSE +VG SG +FA+ L + + P R
Sbjct: 140 VGGIGASLFSCV--------RFYSETSVGASGSIFAL---LALELIYFITAFPGIEPKRI 188
Query: 186 AAWAEL--IIIQMFV---PGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTI 232
+ L +I F+ P V GHLGG++ G+L + GY+ +D + I
Sbjct: 189 VVFILLAPMIFLSFIDAPPQVDIAGHLGGLVVGLL---IGIGYAFADAQSNI 237
>gi|218883583|ref|YP_002427965.1| Rhomboid family protein [Desulfurococcus kamchatkensis 1221n]
gi|218765199|gb|ACL10598.1| Rhomboid family protein [Desulfurococcus kamchatkensis 1221n]
Length = 447
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 35 VTAALLATNTLIYLRPA----FLDSLVPSIHEVWFNPHLILK--YKDLKRFFLSPFYHAS 88
VT ++ N L+Y + FL+S SI+ + F P + + + R F + F HA
Sbjct: 17 VTILIILVNVLVYFYTSYPNLFLESTNESIYLLGFTPATLFTNPLQGVARIFTAMFTHAG 76
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGI-TLLLAKSLVLFFDYERAY 147
H+F+NM L G ++E+ +GS + LL ++ GI +L +++ Y+
Sbjct: 77 LFHIFFNMYFLWLFGRRVESIIGSWRY-----LLLYLTSGIAAVLFHVAIIPVGGYDSLV 131
Query: 148 YSEYAVGFSGVLFAMKVVLNSRSEDYTN------VHGLLVPARYAAWAELIIIQMFVP-- 199
AVG SG A+ VL S + N + L +P + + ++ F
Sbjct: 132 VP--AVGASG---AISGVLGSYLLMFPNTRLMWCMSFLFLPYCFPVSTSVFLLIWFAEQV 186
Query: 200 --------GVSFLGHLGGILAGI 214
GV++ H+GG +AGI
Sbjct: 187 LYGYLRLGGVAYFAHVGGFVAGI 209
>gi|411003693|ref|ZP_11380022.1| hypothetical protein SgloC_12861 [Streptomyces globisporus C-1027]
Length = 301
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H HL +NM+ L W G QLE ++G + + A+ + +T LLA
Sbjct: 139 RLVTSMFLHQEVVHLGFNMLGLWWLGGQLEAALGRSRYLALYLLSGLAGSALTYLLAAQN 198
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
A Y G+ A V++ + D V LL L
Sbjct: 199 QPSLGASGAVY--------GLFGATAVLMRRMNYDMRPVLILLA-------VNLAFTFFN 243
Query: 198 VPGVSFLGHLGGILAGI 214
G+++ H+GG++AG+
Sbjct: 244 RDGIAWQAHVGGLIAGV 260
>gi|303389927|ref|XP_003073195.1| NPL4 nuclear pore protein [Encephalitozoon intestinalis ATCC 50506]
gi|303302340|gb|ADM11835.1| NPL4 nuclear pore protein [Encephalitozoon intestinalis ATCC 50506]
Length = 505
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSRS 299
+W C ACTF N S+CEMCG R
Sbjct: 480 VWECKACTFANERNTSLCEMCGGGRD 505
>gi|354580522|ref|ZP_08999427.1| Rhomboid family protein [Paenibacillus lactis 154]
gi|353202953|gb|EHB68402.1| Rhomboid family protein [Paenibacillus lactis 154]
Length = 204
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 82/197 (41%), Gaps = 41/197 (20%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY---KDLKRFFLSP------- 83
PVT+ LL N +++ F NP +LKY DL +F P
Sbjct: 17 PVTSLLLVANLVMFFITVFDGGSR--------NPITLLKYGALTDLPQFTGEPWRYVTAM 68
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL +N +LL LE MGS +F LL + GI L + L + Y
Sbjct: 69 FLHNGFDHLLFNSFALLVFVPPLERIMGSWKFG-----LLYLLSGI---LGNVIALAY-Y 119
Query: 144 ERAYYSEYAVGFSGVLFA-----MKVVLNSRSEDYTNVHGLLVPARYAAWAELI--IIQM 196
R E VG SG ++ + + L R H + + +R + LI I+
Sbjct: 120 GRMEGYETLVGASGAIYGAYGAYLYIALFQR-------HVMDMASRRTLFTLLILGIVLS 172
Query: 197 FVPGVSFLGHLGGILAG 213
F PG+S + H GG++ G
Sbjct: 173 FTPGISLVAHFGGLIGG 189
>gi|269793370|ref|YP_003312825.1| hypothetical protein Sked_00140 [Sanguibacter keddieii DSM 10542]
gi|269095555|gb|ACZ19991.1| uncharacterized membrane protein [Sanguibacter keddieii DSM 10542]
Length = 286
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 20/143 (13%)
Query: 78 RFFLSPFYHASES-HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKS 136
RF + F H++ H+ NM +L G LE +G F A+ LL G +
Sbjct: 120 RFVTAAFVHSTSFFHIALNMYALWIVGPYLENLLGRVRFTALY--LLSAIGG-----QVA 172
Query: 137 LVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
+VL D A + VG SG +F A+ VV+ ++ G+LV +
Sbjct: 173 VVLLADPSGASWFTGTVGASGAVFGLFGAIFVVMRKMGQE---ARGMLVIIGLN-----L 224
Query: 193 IIQMFVPGVSFLGHLGGILAGIL 215
++ VP +S+ GHLGG++ G +
Sbjct: 225 VVGFVVPNISWQGHLGGLVTGTV 247
>gi|251796149|ref|YP_003010880.1| rhomboid family protein [Paenibacillus sp. JDR-2]
gi|247543775|gb|ACT00794.1| Rhomboid family protein [Paenibacillus sp. JDR-2]
Length = 215
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 23/194 (11%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVW------FNPHLILKYKDLKRFFLSPFYHA 87
PVT+ ++A N + ++ A + + H V + P K+ R S F H+
Sbjct: 17 PVTSVIIALNLIYFIVIAVTGDINDNYHLVQSGGFVSYMPDNPYGLKEPWRIITSMFMHS 76
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV--LFFDYER 145
S H+F+NM S+L LE + ++A + GI L +V LF D
Sbjct: 77 SFQHIFFNMFSILVFAPPLERLLKPVKYAVFYLLC-----GIIANLLTGVVHGLFGDDRT 131
Query: 146 AYYSEYAVG-FSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL---IIIQMFVPGV 201
Y S A G GV A + R +R + L ++ + VP V
Sbjct: 132 IYLSTGASGAIYGVFGAFLYIAIFRKAWLDQ------GSRKTVYTILGFGLVFSVIVPSV 185
Query: 202 SFLGHLGGILAGIL 215
S LGH+GG +AG L
Sbjct: 186 SLLGHVGGGVAGFL 199
>gi|429849740|gb|ELA25087.1| rhomboid protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 266
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 4/146 (2%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
L + R PF H + H+ N+ +L + E G+ A+ + L +
Sbjct: 56 LSFTSSYRMNTYPFVHVNFIHVILNLAALTPLLERFEAEFGTLTSIALFIGPLSTIPAVV 115
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAE 190
+L + F ++ A + +L M+ + ++ Y + +P
Sbjct: 116 YVLIER----FLFKGNVSVMGASVWVFLLLGMEAIRTYKTNPYLTIATHSIPTWTTPLIL 171
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILY 216
++++ VPG S LGHL G+L G L+
Sbjct: 172 VLVVTALVPGTSLLGHLCGVLVGYLF 197
>gi|407985614|ref|ZP_11166204.1| rhomboid family protein [Mycobacterium hassiacum DSM 44199]
gi|407372772|gb|EKF21798.1| rhomboid family protein [Mycobacterium hassiacum DSM 44199]
Length = 221
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 24/135 (17%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H HL +NM +L G LE+++G F A+ +A G G L+
Sbjct: 105 RLLTSTFLHFGPVHLLFNMWALYVVGPPLESALGRLRFTALYLA--GALGGSVLV----- 157
Query: 138 VLFFDYERAYYSEYAVGFSGV---LFAMKVVLNSR-SEDYTNVHGLLVPARYAAWAELII 193
Y A + G SG LFA +V+ R + D V L+V ++
Sbjct: 158 -----YLLAPLNAATAGASGAVFGLFAATLVIGRRLNLDVRWVLALIVIN--------LV 204
Query: 194 IQMFVPGVSFLGHLG 208
I VPG+S+ GH+G
Sbjct: 205 ITFSVPGISWQGHIG 219
>gi|374988154|ref|YP_004963649.1| hypothetical protein SBI_05398 [Streptomyces bingchenggensis BCW-1]
gi|297158806|gb|ADI08518.1| hypothetical protein SBI_05398 [Streptomyces bingchenggensis BCW-1]
Length = 295
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 28/142 (19%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R + F H H+ +NM+SL W G LE ++G + A+ ++A LG S
Sbjct: 133 RLVTAMFLHQQAYHIAFNMLSLWWLGGPLEAALGRARYLAVYLLAGLGGSA--------- 183
Query: 137 LVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
Y A ++ ++G SG +F A V++ + D V LLV L
Sbjct: 184 ----LSYLLAAQNQPSLGASGAIFGLLGATAVLMRRLNYDMRPVIALLV---------LN 230
Query: 193 IIQMFV-PGVSFLGHLGGILAG 213
+I F G+++ H+GG++ G
Sbjct: 231 LIFTFAWSGIAWQAHVGGLVVG 252
>gi|299529356|ref|ZP_07042794.1| Rhomboid-like protein [Comamonas testosteroni S44]
gi|298722605|gb|EFI63524.1| Rhomboid-like protein [Comamonas testosteroni S44]
Length = 500
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 24/156 (15%)
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F S F H S SHL NM+ L G LE ++G+ + A V I + A L
Sbjct: 163 FTSIFLHGSTSHLLGNMVFLFLFGFTLELALGAFTYLAFYV--------IGGIGASLFAL 214
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV- 198
F Y A G L AM V+ R + LL YA W LI++ +++
Sbjct: 215 MFYASMGGYGLGASGAISALMAMYAVMY-RMRRIRFFYMLLFYFNYARWPALIMLPVWMG 273
Query: 199 ----------PGVSFLGHLGGILAGIL----YLKLK 220
V+++ H GG+L G L Y++L+
Sbjct: 274 VELLQHLLGGKQVAYMAHFGGLLTGALLMWSYMRLQ 309
>gi|337282820|ref|YP_004622291.1| rhomboid family protein [Streptococcus parasanguinis ATCC 15912]
gi|335370413|gb|AEH56363.1| rhomboid family protein [Streptococcus parasanguinis ATCC 15912]
Length = 225
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 34 PVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLI-----LKYKDLKRFFLSPFYHA 87
PVT+ LL T ++L S + V+++ +I + L R + F H
Sbjct: 10 PVTSILLLVTTAVFLSMFIRFGSDYQTGAAVYYSGGIIGEVVKVDPSQLWRIVTATFVHI 69
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H NM++L + G E GS F A+ + L GM + + + D A
Sbjct: 70 GLEHFVLNMITLYYLGRLAEDLFGSKAFLALYL-LSGMMGNVFVAIFTP-----DVIAAG 123
Query: 148 YSEYAVGFSGVLFAMKVVLNS-----RSEDYTNVHGLLVPARYAAWAELIIIQM---FVP 199
S G G + A++ ++ S S+ YT+ LI++ + F+P
Sbjct: 124 ASTALFGLFGTIGALRFIVQSPYIRHLSQSYTS---------------LIVVNLIFSFMP 168
Query: 200 GVSFLGHLGGILAGIL 215
G+S GH+GG++AG++
Sbjct: 169 GISMSGHIGGLVAGVM 184
>gi|294786262|ref|ZP_06751516.1| rhomboid family protein [Parascardovia denticolens F0305]
gi|315225796|ref|ZP_07867584.1| rhomboid family membrane protein [Parascardovia denticolens DSM
10105 = JCM 12538]
gi|294485095|gb|EFG32729.1| rhomboid family protein [Parascardovia denticolens F0305]
gi|315119928|gb|EFT83060.1| rhomboid family membrane protein [Parascardovia denticolens DSM
10105 = JCM 12538]
Length = 266
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 84 FYHASE-SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFD 142
F H+ + SH+F+NM+SL G+ LE +G EF A+ + + G+ + LL+ L
Sbjct: 98 FMHSIDISHIFFNMVSLYLAGLSLERMLGHWEFLALYL-VSGLGASVAFLLSA---LASG 153
Query: 143 YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAE-------LIIIQ 195
A S +G SG +F + + V L P R AW+ L++
Sbjct: 154 PSSAVASM--IGASGAIFGLFGAM--------VVTALKSPGRQNAWSMVVFLGLILVVPM 203
Query: 196 MFVPGVSFLGHLGGILAGIL 215
+F GV++ HLGG G L
Sbjct: 204 LFGSGVAWQAHLGGFAVGAL 223
>gi|378732203|gb|EHY58662.1| glycosylphosphatidylinositol transamidase [Exophiala dermatitidis
NIH/UT8656]
Length = 284
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 9/199 (4%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-MSQGI 129
+ + L R F H H+ + + L+ + E G+ A+ + LG + GI
Sbjct: 68 IGFGSLYRLNTFAFIHNGFWHMLMDAICLIPLLERFEAEWGTLNSLALFMGPLGQIPAGI 127
Query: 130 TLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWA 189
LLL V+ D S V +L A + + ++ + + G +P +
Sbjct: 128 YLLLDG--VILRDNTPVVGSSIWVF---LLLASESIKTYKANPHFEISGHQIPTWISPLV 182
Query: 190 ELIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARY 249
L++ +P SFLGHL G + G YL G P ++R G L+ R Y
Sbjct: 183 ILVVTSALIPNTSFLGHLSGCITG--YLWGLGYIRFLAPPEKVLRWIEGKLNLLGRLPHY 240
Query: 250 LFRRPRIYGR-GTVGGSDT 267
+ + YGR G + S T
Sbjct: 241 VSVDQKTYGRYGVLPSSST 259
>gi|430805416|ref|ZP_19432531.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
gi|429502334|gb|ELA00646.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
Length = 533
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 38 ALLATNTLIYL----RPAFLDSLVPSIHEVWF-NPHLILKYKDLKRFFLSPFYHASESHL 92
+++A N L++L R A LD P + W N + + R + F H S HL
Sbjct: 177 SVIAVNVLVWLIMLSRGAALDGAAPKMLIDWGGNLGALTQDGQWWRLLTATFLHGSLKHL 236
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
NM+ L G +E G+ F + V LL +L L+F A + +
Sbjct: 237 AANMVVLYLLGKHVERFFGTRSFLLIYVG--------AGLLGSALSLYF----AAQTSVS 284
Query: 153 VGFSGVLFA-----MKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHL 207
VG SG +F + L R E N+ LV + V H+
Sbjct: 285 VGASGAVFGIGGALLVAALLHRRELPQNIRNRLVSDAVIMIGYSLAQGFLSTRVDNAAHV 344
Query: 208 GGILAGIL 215
GG++ G+L
Sbjct: 345 GGLIGGVL 352
>gi|227496597|ref|ZP_03926875.1| rhomboid family protein [Actinomyces urogenitalis DSM 15434]
gi|226833877|gb|EEH66260.1| rhomboid family protein [Actinomyces urogenitalis DSM 15434]
Length = 282
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 35 VTAALLATNTLIYLRPAFLDSLVPSIH-EVWFNPHLILKYKDLKRFFLSPFYHASESHLF 93
+T L+A ++Y+ + L PS+ + F P ++ RF + F H S HL
Sbjct: 79 ITTGLIAACVVVYV----IQMLRPSLTTDFGFAP--VVALSQPWRFLSTAFLHGSLMHLA 132
Query: 94 YNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
+NM +L G LE +G FAA+ ++ LG S I LL + A +
Sbjct: 133 FNMWALWVCGSALEPLLGRWRFAALYALSALGGSTAIYLLSSPG--------SASWITLT 184
Query: 153 VGFSGVLFAM--KVVLNSR--SEDYTNVHGLL 180
VG SG +F + V L R D + + GLL
Sbjct: 185 VGASGAVFGLFAAVFLIQRRFGRDTSAILGLL 216
>gi|154483847|ref|ZP_02026295.1| hypothetical protein EUBVEN_01551 [Eubacterium ventriosum ATCC
27560]
gi|149735338|gb|EDM51224.1| peptidase, S54 family [Eubacterium ventriosum ATCC 27560]
Length = 201
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 22/191 (11%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPS----IHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
P VTA L+A N +++L F S H + P I + R S F H
Sbjct: 10 PYVTAVLVAINVVVFLVMEFFGSTESGEYMYAHGASYAPD-IFENGQWYRILTSMFMHFG 68
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEF--AAMVVALLG--MSQGITLLLAKSLVLFFDYE 144
HL NM+ L G Q+E + G ++ + + G +S GI ++ + +
Sbjct: 69 AEHLINNMVMLYILGYQIEENFGRVKYLITYFICGIAGGIISSGIEMITGEYSI------ 122
Query: 145 RAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
A S G GVL M + SR + G + R L++ GV ++
Sbjct: 123 SAGASGAIFGIFGVLLVM--IFKSRKQ-----LGQVSAPRLILLFILMVFGNMQEGVDWM 175
Query: 205 GHLGGILAGIL 215
HLGG + G++
Sbjct: 176 AHLGGAVTGVV 186
>gi|393199141|ref|YP_006460983.1| membrane protein [Solibacillus silvestris StLB046]
gi|406666244|ref|ZP_11074012.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
gi|327438472|dbj|BAK14837.1| uncharacterized membrane protein [Solibacillus silvestris StLB046]
gi|405385783|gb|EKB45214.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
Length = 207
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 27/189 (14%)
Query: 34 PVTAALLATNTLIY---LRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
PV ++++A N +++ L P F + L+ + V + ++ + R S F HA
Sbjct: 16 PVVSSIIAINLIVFVLTLIPGFGEELLYAGMSV----NGLIAAGEWWRIITSMFLHAGFM 71
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
H+ +NM SL G +LE G F + + L G+ A + AYY+
Sbjct: 72 HVLFNMFSLFLFGPELEKIAGKMRF--LTIYFLAGIFGVAATYAT--------QDAYYA- 120
Query: 151 YAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGH 206
+VG SG L+ A ++ + + +++P + II+ P ++ H
Sbjct: 121 -SVGASGALYGIFGAFGALVYYTRHLFPQLRQIILPLIVIS----IIMTFLTPNINIAAH 175
Query: 207 LGGILAGIL 215
LGG++ G +
Sbjct: 176 LGGLVTGFI 184
>gi|312130606|ref|YP_003997946.1| rhomboid family protein [Leadbetterella byssophila DSM 17132]
gi|311907152|gb|ADQ17593.1| Rhomboid family protein [Leadbetterella byssophila DSM 17132]
Length = 221
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 48/220 (21%)
Query: 34 PVTAALLATNTLIYLRPAF------------LDSLVPSIHEVW---FNPHLILKYKDLKR 78
P LL N LI+L F + ++P ++W F P I+ Y
Sbjct: 7 PTVKNLLIANVLIHLLANFSPNDVIRQLFSMYNPVLPGTPDLWNPNFKPWQIVTYM---- 62
Query: 79 FFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKS 136
F H+ ++ HLF NM +LL G +E MGS +F + + G+ + +A
Sbjct: 63 -----FLHSRDTFMHLFSNMFALLIFGPAIEMYMGSKKFLKYYL-ICGIGAAL-FNMAID 115
Query: 137 LVLFFDY------ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL------VPAR 184
FF Y +R + +G SG +F +L + + + N+ +L + A+
Sbjct: 116 YYTFFQYPISDATQRFLSIKSMLGASGAIFG---ILVAFAMIFPNIEMMLLFLPVPIKAK 172
Query: 185 Y--AAWAELIIIQMFV---PGVSFLGHLGGILAGILYLKL 219
Y A +A I+Q F G++ H+GG++ G + L+
Sbjct: 173 YFVAMYAIFEIVQGFQRTGSGIAHWAHIGGLITGFILLQF 212
>gi|395212597|ref|ZP_10399870.1| rhomboid family protein [Pontibacter sp. BAB1700]
gi|394457114|gb|EJF11307.1| rhomboid family protein [Pontibacter sp. BAB1700]
Length = 305
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H H+ +NM++L W G + +G + ++ + L G++ G+ +L+ +L+ +F
Sbjct: 76 FTHEGFLHIIFNMLNLYWFGQLIREYLGEKKLLSLYI-LGGIAGGLLYILSYNLIPYFA- 133
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV-- 201
+RA Y+ +G S + A+ V + +YT ++ P R A ++I +
Sbjct: 134 DRAAYA-VMIGASASVLAVVVAAATLIPNYTFNLLIIGPVRIKYIAAFLVILSISGAIGD 192
Query: 202 ---SFLGHLGGILAGILYLK-LKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIY 257
+ HLGG L G L++K L+ G PL + TG+ RRP++
Sbjct: 193 NAGGNIAHLGGALFGWLFIKQLQRGRDMGRPLHGTMDFFTGLFK----------RRPKLK 242
Query: 258 ----GRGTVGGSDTRRTA 271
+ TVG + R +
Sbjct: 243 VTHRQKATVGNNGARNNS 260
>gi|326678432|ref|XP_002666261.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Danio rerio]
Length = 607
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRS 299
W C +CTF NSG L CEMC + R+
Sbjct: 323 WNCSSCTFSNSGLLLRCEMCDSPRN 347
>gi|345000844|ref|YP_004803698.1| Rhomboid family protein [Streptomyces sp. SirexAA-E]
gi|344316470|gb|AEN11158.1| Rhomboid family protein [Streptomyces sp. SirexAA-E]
Length = 299
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R F S F H H+ +NM+ L W G LE ++G + A+ + ++ L +L
Sbjct: 137 RLFTSMFLHQEVWHIAFNMLGLWWLGGPLEAALGRVRYLALYL--------LSGLAGSAL 188
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
Y + ++ ++G SG +F A V++ + D V LLV + +
Sbjct: 189 T----YAVSDPAQGSLGASGAVFGLLGATAVLMRRMNYDMRPVIALLV---------VNL 235
Query: 194 IQMFVP--GVSFLGHLGGILAGIL 215
I F P +++ HLGG++AG++
Sbjct: 236 IFTFNPWGSIAWQAHLGGLVAGVV 259
>gi|170035589|ref|XP_001845651.1| stem cell tumor [Culex quinquefasciatus]
gi|167877624|gb|EDS41007.1| stem cell tumor [Culex quinquefasciatus]
Length = 364
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 79/211 (37%), Gaps = 58/211 (27%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLS 82
F YH L A + +++ RP HEVW RF
Sbjct: 127 FFTYHTLTSGQADPAGPVPIDSMFIYRP-------DKRHEVW-------------RFLFY 166
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA-LLGMSQGITLLLAKSLVLFF 141
HA HL +N++ L G+ LE GS + +A +L S G ++ F
Sbjct: 167 MVLHAGWFHLGFNLVVQLLVGLPLEMVHGSTRIGCVYLAGVLAGSLGTSV---------F 217
Query: 142 DYERAYYSEYAVGFSGVLFAM------KVVLNSRSEDYTNVH------------GLLVPA 183
D E Y VG SG ++A+ V+LN R Y + G + +
Sbjct: 218 DPE-----VYLVGASGGVYALLAAHLANVMLNYRQMQYGIIRLLAIFLFASCDVGFAIYS 272
Query: 184 RYAAWAELIIIQMFVPGVSFLGHLGGILAGI 214
RYA E P VS++ HL G LAG+
Sbjct: 273 RYAVEPE-----SGAPSVSYVAHLTGALAGL 298
>gi|322390373|ref|ZP_08063896.1| rhomboid family protein [Streptococcus parasanguinis ATCC 903]
gi|321142914|gb|EFX38369.1| rhomboid family protein [Streptococcus parasanguinis ATCC 903]
Length = 225
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 34 PVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLI-----LKYKDLKRFFLSPFYHA 87
PVT+ LL T ++L S + V+++ +I + L R + F H
Sbjct: 10 PVTSLLLLVTTAVFLSMFIRFGSDYQTGAAVYYSGGIIGEVVKVDPSQLWRIVTATFVHI 69
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H NM++L + G E GS F A+ + L GM + + + D A
Sbjct: 70 GLEHFVLNMITLYYLGRLAEDLFGSKAFLALYL-LSGMMGNVFVAIFTP-----DVIAAG 123
Query: 148 YSEYAVGFSGVLFAMKVVLNS-----RSEDYTNVHGLLVPARYAAWAELIIIQM---FVP 199
S G G + A++ ++ S S+ YT+ LI++ + F+P
Sbjct: 124 ASTALFGLFGTIGALRFIVQSPYIRHLSQSYTS---------------LIVVNLIFSFMP 168
Query: 200 GVSFLGHLGGILAGIL 215
G+S GH+GG++AG++
Sbjct: 169 GISMAGHIGGLVAGLM 184
>gi|212555202|gb|ACJ27656.1| Rhomboid-like protein [Shewanella piezotolerans WP3]
Length = 360
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 22/214 (10%)
Query: 32 KPPVTAALLATNTLIYLRPAFLD-SLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES 90
KP VT ALLA N +I+ + + + V P L+++ + + F H
Sbjct: 150 KPWVTYALLALNIIIFFAYGYSEPATVWVFDHFAMQPSLVMQGEQVMPLLSHMFLHGDII 209
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
HL NM L G LE ++G F A V L G + + + D A +
Sbjct: 210 HLLGNMYFLYVVGDNLEDALGHARFLA-VYLLCGFAAAFAQIAS-------DPTSAIFMV 261
Query: 151 YAVGFSGVLFAMKVVL---NSRSEDYTNVHGLLVP-ARYAAWAELIIIQMFVP-----GV 201
A G LF M ++ S + + L P +A W ++I +F GV
Sbjct: 262 GASGAIAGLFGMYLLWFRHASLTFMFVIYQKKLSPMVFFAIW---LLINLFGAWAAQGGV 318
Query: 202 SFLGHLGGILAG-ILYLKLKGGYSGSDPLTTIIR 234
++ H+GG +AG I+ L LK ++P+ ++
Sbjct: 319 AYWAHIGGFIAGLIIGLLLKARVMSANPILALLN 352
>gi|312963279|ref|ZP_07777763.1| rhomboid family protein [Pseudomonas fluorescens WH6]
gi|311282545|gb|EFQ61142.1| rhomboid family protein [Pseudomonas fluorescens WH6]
Length = 186
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 23/143 (16%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
SPF HAS +HL N+++ L G L G F A+ I ++L SLV F
Sbjct: 50 SPFLHASFAHLSANLIAFLILG-TLVIIEGVKRFMAV--------SAIIIVLGGSLVWLF 100
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRS---EDYTNVHGLLVPARYAAWAELIIIQMFV 198
+ + +G SG +F + L SR+ ++N L+ A A ++ F+
Sbjct: 101 GFAGLH-----IGASGWVFGLWAYLLSRAWFHRSWSN----LITASVVALLYGGLVVGFL 151
Query: 199 P--GVSFLGHLGGILAGILYLKL 219
P GVSF GHL G AG + K+
Sbjct: 152 PRQGVSFEGHLFGAFAGFIAAKV 174
>gi|126438092|ref|YP_001073783.1| rhomboid family protein [Mycobacterium sp. JLS]
gi|126237892|gb|ABO01293.1| Rhomboid family protein [Mycobacterium sp. JLS]
Length = 289
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 27/188 (14%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
KP VT AL+A N L++L L V + P + + R S F H H
Sbjct: 75 KPVVTYALIAVNVLVFLMQTTSGQL--EREFVLWTPGV--ADGEWYRLATSAFLHYGAMH 130
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L +NM +L G LE +G F A+ ++ L LV A +
Sbjct: 131 LLFNMWALYVVGPPLEMWLGRLRFGAL--------YALSALGGSVLVYLLSPINAATAGA 182
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV------PGVSFLG 205
+ G+ AM VV + D + +++ L ++ FV G+S+ G
Sbjct: 183 SGAVFGLFGAMFVVARKLNLDIRGIAAIII---------LNLVFTFVYPLISGQGISWQG 233
Query: 206 HLGGILAG 213
H+GG++ G
Sbjct: 234 HVGGLVTG 241
>gi|404406119|ref|ZP_10997703.1| hypothetical protein AJC13_11845 [Alistipes sp. JC136]
Length = 200
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL--KYKDLKRFFLSPFYHASE 89
PPV L+ N L+Y+ A L+P +++ L L + +F F HA+
Sbjct: 7 TPPVVKNLIIINVLVYMATA----LLPVGNQIMEYCALSLGTPFFHTYQFITYMFLHANF 62
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAA--MVVAL-LGMSQGITLLLAKSLVLFFDYERA 146
H+F+NM +L G LE +GS F MV + + Q +T L L L
Sbjct: 63 EHIFFNMFALWMFGRTLEYELGSQRFLTFYMVCGIGAALIQYLTALAFGELPLLL----- 117
Query: 147 YYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELI--IIQMF----- 197
VG SG + + + + V LL+P A W +I +I++F
Sbjct: 118 ------VGASGAVMGLLLAFGVMHPN--AVIMLLIPPIPMKAKWFVIIYAVIELFLGWRG 169
Query: 198 VPGVSFLGHLGGILAGILYL 217
V V+ H+GG+L G L L
Sbjct: 170 VGNVAHFAHVGGMLWGFLLL 189
>gi|166033079|ref|ZP_02235908.1| hypothetical protein DORFOR_02801 [Dorea formicigenerans ATCC
27755]
gi|166027436|gb|EDR46193.1| peptidase, S54 family [Dorea formicigenerans ATCC 27755]
Length = 199
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 33 PPVTAALLATNTLIYLRPAFL----DSLVPSIHEVWFNPHLILKYKDLKRFFL---SPFY 85
P T A+ A N LI+L +F+ DS H + P+L+ + +R++ S F
Sbjct: 8 PICTIAIAAANVLIFLGLSFMGMTEDSAFMMEHGAMYVPYLM----NGERYYTLITSMFL 63
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
H SHL NM+ LL G LE +G F L+ + G L+ + +FD +
Sbjct: 64 HFGFSHLMNNMVMLLVIGYSLEPEIGKIRF-----LLIYLGSG---LMGNLVSAWFDVSQ 115
Query: 146 AYYSEYAVGFSGVLFAMKVVL------NSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
Y+ A G SG +F + L N + GL++ A + +
Sbjct: 116 GSYAVSA-GASGAIFGIVGALLYVAIRNHGRVGEISTRGLVLMAGLSLYYGFT-----AQ 169
Query: 200 GVSFLGHLGGILAGIL 215
GV H+GG+++G L
Sbjct: 170 GVDNAAHIGGLVSGFL 185
>gi|225174272|ref|ZP_03728271.1| Rhomboid family protein [Dethiobacter alkaliphilus AHT 1]
gi|225170057|gb|EEG78852.1| Rhomboid family protein [Dethiobacter alkaliphilus AHT 1]
Length = 192
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKS 136
F H +H+ NM L+W GI +E +GSN + +V+ + ++ G+TLLL ++
Sbjct: 57 FVHVDWNHIIINMGLLIWIGIWVERLIGSNRYIVLVIGGI-LAGGLTLLLRET 108
>gi|325299446|ref|YP_004259363.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
gi|324318999|gb|ADY36890.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
Length = 298
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F HA H+ +NM+ L W G + + V L G++ +LA +L +F
Sbjct: 77 FMHAGILHILFNMLWLYWFGRLFLGFFSARHLRGLYV-LGGIAGAALYMLAYNLFPYF-- 133
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL--VPARYAAWAELIIIQMFVPGV 201
E A YS Y +G S + A+ V R DY + V +Y A + + +F+
Sbjct: 134 EDAVYSSYLLGASASVLAIVVATAVREPDYPVQFMFIGTVRLKYVAVFMVALDLLFMTAD 193
Query: 202 S---FLGHLGGILAG 213
+ L HLGG LAG
Sbjct: 194 NAGGHLAHLGGALAG 208
>gi|452910770|ref|ZP_21959448.1| rhomboid family serine protease [Kocuria palustris PEL]
gi|452834191|gb|EME36994.1| rhomboid family serine protease [Kocuria palustris PEL]
Length = 268
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 82 SPFYHA--SESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLV 138
S F H+ + +HL NM +L G LE +G F + +++LLG + + LLL+ +
Sbjct: 128 SGFSHSMSNPAHLLLNMYTLWIFGRMLEPEIGRGRFLTVYLLSLLGGAAAV-LLLSPAYT 186
Query: 139 LFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV 198
A + G G + A+ + R + N+ G+LV + +F
Sbjct: 187 FTVGASGAVF-----GLFGAVLALALWGGRRYRE--NLSGILVLIGFNT-----AFGLFF 234
Query: 199 PGVSFLGHLGGILAGILYL 217
PG+S+ GHLGGI+ G++ +
Sbjct: 235 PGISWQGHLGGIVTGMVVM 253
>gi|373253330|ref|ZP_09541448.1| rhomboid family protein [Nesterenkonia sp. F]
Length = 219
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 78 RFFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R S H+ S H+ +NMM+L G +E ++G+ + +++V ++ A
Sbjct: 48 RMLTSAVLHSPSSVMHIAFNMMALWVVGRTIEPAVGTWRYLSLLV--------LSAFGAS 99
Query: 136 SLVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
VLF VG SG +F A+ V+L S + L+
Sbjct: 100 VAVLFLSEP----GTLTVGASGAVFGLFGALFVLLRSTGAQTGGIIALV--------GIN 147
Query: 192 IIIQMFVPGVSFLGHLGGILAGIL 215
+ + VPG+S+ GHLGG++ G+L
Sbjct: 148 MAVSFLVPGISWQGHLGGLVTGLL 171
>gi|320102400|ref|YP_004177991.1| rhomboid family protein [Isosphaera pallida ATCC 43644]
gi|319749682|gb|ADV61442.1| Rhomboid family protein [Isosphaera pallida ATCC 43644]
Length = 406
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
+ +L + R S F H HL +NM+ L + G LE +G+ EF + +
Sbjct: 133 LDSQAVLNQFQVWRLITSIFLHEGPFHLLFNMLVLFFIGRILEHELGTREFVMVFLV--- 189
Query: 125 MSQGITLLLAKSLVLFFDYERAYYS----EYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL 180
G+ LA++ A+Y+ +G SG + + +L R + + +
Sbjct: 190 --SGLVGSLAQT---------AFYALTGPGLCLGASGAVSGLFGLLALRMPNLQVLLFFI 238
Query: 181 VPA--RYAAWAELII--IQMFVPGVS-FLGHLGGILAGILYLKLKGGYSG 225
+P R A A ++I I F+PG + L HLGG+ G+ + +SG
Sbjct: 239 IPVTMRNALIAFIVIDVIFTFLPGTTATLAHLGGLSVGMAHSYFNLNFSG 288
>gi|108802111|ref|YP_642308.1| rhomboid-like protein [Mycobacterium sp. MCS]
gi|119871264|ref|YP_941216.1| rhomboid family protein [Mycobacterium sp. KMS]
gi|108772530|gb|ABG11252.1| Rhomboid-like protein [Mycobacterium sp. MCS]
gi|119697353|gb|ABL94426.1| Rhomboid family protein [Mycobacterium sp. KMS]
Length = 289
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 27/188 (14%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
KP VT AL+A N L++L L V + P + + R S F H H
Sbjct: 75 KPVVTFALIAVNVLVFLMQTTSGQL--EREFVLWTPGV--ADGEWYRLATSAFLHYGAMH 130
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L +NM +L G LE +G F A+ ++ L LV A +
Sbjct: 131 LLFNMWALYVVGPPLEMWLGRLRFGAL--------YALSALGGSVLVYLLSPINAATAGA 182
Query: 152 AVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV------PGVSFLG 205
+ G+ AM VV + D + +++ L ++ FV G+S+ G
Sbjct: 183 SGAVFGLFGAMFVVARKLNLDIRGIAAIII---------LNLVFTFVYPLISGQGISWQG 233
Query: 206 HLGGILAG 213
H+GG++ G
Sbjct: 234 HVGGLVTG 241
>gi|417003054|ref|ZP_11942140.1| peptidase, S54 family [Anaerococcus prevotii ACS-065-V-Col13]
gi|325478800|gb|EGC81910.1| peptidase, S54 family [Anaerococcus prevotii ACS-065-V-Col13]
Length = 227
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 73/189 (38%), Gaps = 28/189 (14%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + F H H+ +NM L G E GS F I LLA +
Sbjct: 58 RILSAAFIHIGFFHIMFNMYFLYNIGPLFERLYGSINFL------------IIYLLAGVM 105
Query: 138 VLFFDYERAYYSEYAVGFSGVLF-----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
F Y S + G S L+ AM +++N + + G A++ +I
Sbjct: 106 GNLFTYAFGDVSTVSAGASTSLYGMFGLAMGLMINYKDDAVLRGLG-------ASFISII 158
Query: 193 IIQM----FVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFAR 248
+I + PG+ GHLGG LAG+L + + + PLTTI+ + F R
Sbjct: 159 VINLIYSLLAPGIGIQGHLGGFLAGVLLAGIFPVVNRNLPLTTIVISVAAFVILCFLFIR 218
Query: 249 YLFRRPRIY 257
+ IY
Sbjct: 219 IGNKSISIY 227
>gi|194688302|gb|ACF78235.1| unknown [Zea mays]
Length = 336
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 46/220 (20%)
Query: 2 ERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIH 61
GG G V+RG L + +E P P +A L L++ D +V H
Sbjct: 73 RHGGAGSCVARGFLHRFSFQPLSEN---PLLGPSSATLQKLGALVW------DKVVRE-H 122
Query: 62 EVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
+ W R + HA +HL NM+SL+ G++LE +F + V
Sbjct: 123 QGW-------------RLVTCIWLHAGVAHLLANMISLVLIGLRLE-----QQFGYVRVG 164
Query: 122 LLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLV 181
++ + G+ + SL + + +VG SG LF + + SE +TN +
Sbjct: 165 IIYLVSGVGGSVLSSLFI--------RNNISVGASGALFGLLGAM--LSELFTN--WTIY 212
Query: 182 PARYAAWAELIIIQM------FVPGVSFLGHLGGILAGIL 215
+ AA L+++ +P V H+GG L G L
Sbjct: 213 ANKAAALVTLLVVIAINLAIGILPHVDNFAHIGGFLTGFL 252
>gi|302552712|ref|ZP_07305054.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
gi|302470330|gb|EFL33423.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
Length = 296
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 27/144 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H H+ +NM+SL W G LE ++G + A+ + ++ L +L
Sbjct: 134 RMVTSMFTHQEIWHIAFNMLSLWWLGGPLEAALGRVRYLALYL--------VSGLAGSAL 185
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
Y A + +G SG +F A V++ + D + LL + +
Sbjct: 186 A----YLLASPNTATLGASGAIFGLFGATAVLMRRLNYDMRPIIALLA---------INL 232
Query: 194 IQMFVPG--VSFLGHLGGILAGIL 215
I F PG +S+ H+GG++AG++
Sbjct: 233 IFTFSPGFNISWQAHIGGLVAGVV 256
>gi|115486807|ref|NP_001068547.1| Os11g0704800 [Oryza sativa Japonica Group]
gi|62733172|gb|AAX95289.1| Rhomboid family, putative [Oryza sativa Japonica Group]
gi|77552712|gb|ABA95509.1| rhomboid family protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645769|dbj|BAF28910.1| Os11g0704800 [Oryza sativa Japonica Group]
Length = 374
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + HA HL NM+ LL+ GI+LE EF + + L+ + G+ L +L
Sbjct: 116 RLITCIWLHAGVVHLLINMLCLLFIGIRLE-----QEFGFVRIGLVYLISGLGGSLMSAL 170
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM- 196
+ S +VG SG LF + + + SE TN L + AA L+ + +
Sbjct: 171 FI--------RSSISVGASGALFGL--IGSMLSELITNWS--LYANKVAALLTLVFVIVV 218
Query: 197 -----FVPGVSFLGHLGGILAGIL 215
+P V H+GG+++G L
Sbjct: 219 NLALGILPRVDNFAHIGGLISGFL 242
>gi|288931169|ref|YP_003435229.1| rhomboid family protein [Ferroglobus placidus DSM 10642]
gi|288893417|gb|ADC64954.1| Rhomboid family protein [Ferroglobus placidus DSM 10642]
Length = 260
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
S F H S H N + LL+ G +LE +GS + + L G+ I +L F
Sbjct: 115 SIFLHGSFDHYLVNAIVLLFFGGELERRLGSKRYLE-IFFLSGIVGNIFYIL-------F 166
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR-------YAAWAELIII 194
+ ++ AVG SG L+ + L + + + ++P +AA+ L++
Sbjct: 167 SFATNNFAP-AVGASGALYGIMGALALIAPEIRVLLFFVIPVDIKTAILLFAAYNILMLP 225
Query: 195 QMFVPGVSFLGHLGGILAGILYLK 218
GV+++ HLGG+L G+ Y K
Sbjct: 226 FTAFTGVAYIAHLGGLLVGLYYGK 249
>gi|323486504|ref|ZP_08091827.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|355629057|ref|ZP_09050194.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
gi|323400207|gb|EGA92582.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|354819380|gb|EHF03825.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
Length = 209
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 37/199 (18%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHE-------VWFNPHLILKYKDLKRFFLSPF 84
K V A++A N + +L FL+ S++ + P LIL+Y + R S F
Sbjct: 7 KAYVNGAIIAVNIIYFL---FLEITGSSLNTGFMVKRGAMYAP-LILQYGEYYRLLTSVF 62
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYE 144
H HL NM+ L G LE ++G ++ + L G+ A + L +
Sbjct: 63 MHFGIGHLINNMLVLFVLGDNLERALGKVKYLIFYL-LCGIG-------ANIISLAVNMG 114
Query: 145 RAYYSEYAVGFSGVLFAM------KVVLN-SRSEDYTNVHGLLVPAR--YAAWAELIIIQ 195
R YY A G SG +F + V +N R ED + +++ A Y +
Sbjct: 115 RGYYVVSA-GASGAIFGVVGGLVYAVAVNRGRLEDLSTQQLMILVAVTLYHGFTS----- 168
Query: 196 MFVPGVSFLGHLGGILAGI 214
GV H+GG+L GI
Sbjct: 169 ---TGVDNAAHVGGLLIGI 184
>gi|307710953|ref|ZP_07647376.1| rhomboid family protein [Streptococcus mitis SK321]
gi|307617193|gb|EFN96370.1| rhomboid family protein [Streptococcus mitis SK321]
Length = 225
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
+ P ++L + + R F + F H H NM+SL + G Q+E GS +F + + L G
Sbjct: 47 YGPAILLFPEQVWRLFSAIFVHIGWEHFIVNMISLYYLGRQVEEIFGSKKFFFLYL-LSG 105
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR 184
M +L +F ++ + + G+ A+ V+ + Y G +
Sbjct: 106 M--------MGNLFVFVFSPKSLAAGASTSLYGLFAAIIVLRYATRNPYIQQLG---QSY 154
Query: 185 YAAWAELIIIQMFVPGVSFLGHLGGILAG 213
+ II + +PG+S GH+GG + G
Sbjct: 155 LTLFVVNIIGSVLIPGISLAGHIGGAVGG 183
>gi|419800122|ref|ZP_14325427.1| peptidase, S54 family [Streptococcus parasanguinis F0449]
gi|385696180|gb|EIG26685.1| peptidase, S54 family [Streptococcus parasanguinis F0449]
Length = 225
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 34 PVTAALLATNTLIYLRPAF-LDSLVPSIHEVWFNPHLI-----LKYKDLKRFFLSPFYHA 87
PVT+ LL T ++L S + V+++ +I + L R + F H
Sbjct: 10 PVTSLLLLVTTAVFLSMFIRFGSDYQTGAAVYYSGGIIGEVVKVDPSQLWRIVTATFVHI 69
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAY 147
H NM++L + G E GS F A+ + L GM + + + D A
Sbjct: 70 GLEHFVLNMITLYYLGRLAEDLFGSKAFLALYL-LSGMMGNVFVAIFTP-----DVIAAG 123
Query: 148 YSEYAVGFSGVLFAMKVVLNS-----RSEDYTNVHGLLVPARYAAWAELIIIQM---FVP 199
S G G + A++ ++ S S+ YT+ LI++ + F+P
Sbjct: 124 ASTALFGLFGTIGALRFIVQSPYIRHLSQSYTS---------------LIVVNLIFSFMP 168
Query: 200 GVSFLGHLGGILAGIL 215
G+S GH+GG++AG++
Sbjct: 169 GISMAGHIGGLVAGLM 184
>gi|351705102|gb|EHB08021.1| Nuclear protein localization protein 4-like protein [Heterocephalus
glaber]
Length = 583
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 254 PRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS 299
P ++ G VGGS TR +W C CTF N CEMC R+
Sbjct: 539 PGLHEYGAVGGS-TRAATTAMWACQHCTFMNQPGTGHCEMCSLPRT 583
>gi|387880413|ref|YP_006310716.1| rhomboid family membrane protein [Streptococcus parasanguinis
FW213]
gi|386793861|gb|AFJ26896.1| rhomboid family membrane protein [Streptococcus parasanguinis
FW213]
Length = 225
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
L R + F H H NM++L + G E GS F A+ + L GM + + +
Sbjct: 56 SQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYL-LSGMMGNVFVAI 114
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNS-----RSEDYTNVHGLLVPARYAAW 188
D A S G G + A++ ++ S S+ YT+
Sbjct: 115 FTP-----DVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYTS------------- 156
Query: 189 AELIIIQM---FVPGVSFLGHLGGILAGIL 215
LI++ + F+PG+S GH+GG++AG++
Sbjct: 157 --LIVVNLIFSFMPGISMSGHIGGLVAGVM 184
>gi|408500318|ref|YP_006864237.1| integral membrane protein (Rhomboid family) [Bifidobacterium
asteroides PRL2011]
gi|408465142|gb|AFU70671.1| integral membrane protein (Rhomboid family) [Bifidobacterium
asteroides PRL2011]
Length = 253
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 37/168 (22%)
Query: 57 VPSIHEVWFNPHLILKYKDLKRFFLSPFYHASE-SHLFYNMMSLLWKGIQLETSMGSNEF 115
+ +IHE W F + F HA+ SH+ +NM++L G LE +G F
Sbjct: 72 ITAIHEPWM-------------FVTNIFLHATNVSHILFNMITLWVVGPVLENLIGHGRF 118
Query: 116 AAM-VVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRS 170
A+ +++ LG G L+++ + A+G SG LF A+ VV
Sbjct: 119 LALYMISGLGGDLG--------LMVYAVLAPNGWGTSAIGASGALFGLFAAILVVYRRLG 170
Query: 171 EDYTNVHGLLVPARYAAWAEL-IIIQMFVPGVSFLGHLGGILAGILYL 217
D ++ W + + +FVPG+++ H+GG + G L++
Sbjct: 171 IDIISM---------VVWMAINFCMPLFVPGIAWQDHVGGFIVGGLFM 209
>gi|345007980|ref|YP_004810334.1| rhomboid family protein [Streptomyces violaceusniger Tu 4113]
gi|344034329|gb|AEM80054.1| Rhomboid family protein [Streptomyces violaceusniger Tu 4113]
Length = 294
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R S F H H+ +NM+SL W G LE ++G F + +++ LG S
Sbjct: 132 RLVTSIFLHQQLIHIAFNMLSLWWIGGPLEAALGRVRFIVLYILSGLGGSA--------- 182
Query: 137 LVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
Y A ++ ++G SG +F A V++ + D V LL A +
Sbjct: 183 ----LSYLLAAQNQPSLGASGAIFGLLGATAVLMRRLNYDMRPVIALL--------ALNL 230
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+ G+++ H+GG++AG
Sbjct: 231 LFTFTWSGIAWQAHVGGLVAG 251
>gi|224010728|ref|XP_002294321.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969816|gb|EED88155.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 827
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 66/170 (38%), Gaps = 34/170 (20%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETS--MGSNEFAAMVVALLGMSQGITLLLAK 135
R F H H+ +NMMSL G +LE GS F VA + M+ + + +
Sbjct: 278 RGFTGATAHFEPLHIGFNMMSLNTLGRELEGGGIFGSVVFLVYNVAFVVMTSLVMMGMVF 337
Query: 136 SLVLFFDYE---------RAYYSE--------YAVGFSGVLFAMKVVLNSRSEDYT---- 174
+ + +Y+ R E VG+S VLFA V+ T
Sbjct: 338 GRLQWIEYQILRTRDEVLRQQLEERQTRLRETSTVGYSAVLFAWMVISTLERNQPTCPIP 397
Query: 175 ----------NVHGL-LVPARYAAWAELIIIQMFVPGVSFLGHLGGILAG 213
+V GL + A L I Q +P VSF+GHL GI+ G
Sbjct: 398 FFSDVCFSTYSVPGLPFLKFNIAPVISLFIAQFIMPRVSFMGHLAGIICG 447
>gi|289668300|ref|ZP_06489375.1| integral membrane protein [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 232
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 51/228 (22%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSL---------VPSIHEVW--------------F 65
+P PP+T ALL N ++L + L V S +W F
Sbjct: 1 MPQLPPITKALLIANIGLFLLQWAVGDLSADVLPSDSVLSWLMLWPLSNGFDAFSPGASF 60
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
P +L Y F H +HLF+NM++L G LE + G F + +
Sbjct: 61 MPWQLLTYA---------FLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAG 111
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
+ LL+A +F A + G G+L A ++ ++ V L P
Sbjct: 112 AGVCQLLMA-----WFTQSVAPVVGASGGVFGLLLAYGMLFPNQ-----RVMLLFPPIPM 161
Query: 186 AAWAELII---IQMFV------PGVSFLGHLGGILAGILYLKLKGGYS 224
A +I+ I++F+ PGV+ HLGG+L G L ++ G S
Sbjct: 162 KARTFVIVFGAIELFLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQS 209
>gi|449483645|ref|XP_004156648.1| PREDICTED: uncharacterized protein LOC101224387 [Cucumis sativus]
Length = 471
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 74 KDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLL 133
L R + HA HL NM+SLL GI+LE EF + + LL + G L
Sbjct: 209 NQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLE-----QEFGFIRIGLLYVISGFGGSL 263
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
SL + S +VG SG LF + + SE TN + + AA L++
Sbjct: 264 LSSLFI--------QSNISVGASGALFGL--LGGMLSELITN--WTIYSNKVAALVTLLV 311
Query: 194 IQM------FVPGVSFLGHLGGILAGIL 215
I +P V H+GG ++G L
Sbjct: 312 IIAINLAVGILPHVDNFAHIGGFISGFL 339
>gi|188577743|ref|YP_001914672.1| peptidase, S54 (rhomboid) family [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188522195|gb|ACD60140.1| peptidase, S54 (rhomboid) family, putative [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 232
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 51/228 (22%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSL---------VPSIHEVW--------------F 65
+P PP+T ALL N ++L + L V S +W F
Sbjct: 1 MPQLPPITKALLIANIGLFLLQWAVGDLSAGVLPSDSVLSWLMLWPLSNGFDAFSPGASF 60
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
P +L Y F H +HLF+NM++L G LE + G F + +
Sbjct: 61 MPWQLLTYA---------FLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAG 111
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
+ LL+A +F A + G G+L A ++ ++ V L P
Sbjct: 112 AGVCQLLIA-----WFTQSGAPVVGASGGVFGLLLAYGMLFPNQ-----RVMLLFPPIPM 161
Query: 186 AAWAELII---IQMFV------PGVSFLGHLGGILAGILYLKLKGGYS 224
A +I+ I++F+ PGV+ HLGG+L G L ++ G S
Sbjct: 162 KARTFVIVFGAIELFLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQS 209
>gi|320162418|ref|YP_004175643.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
gi|319996272|dbj|BAJ65043.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
Length = 258
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 79/197 (40%), Gaps = 30/197 (15%)
Query: 28 RLPW-KPPVTAALLATNTLIYL-----RPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFL 81
R+P KP VT LL +YL RP F L+ ++ + +++ + R
Sbjct: 30 RVPLTKPLVTYILLGVTVGVYLLQMLSRPLFGYDLLLAMGA---KSNTLIQQGEFWRLIT 86
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
F H S H+ +NM +L G+ LE G F +++ +G G+ L S
Sbjct: 87 PMFLHVSLPHIAFNMYALYAFGVSLERHYGRRRF--LLLYFIGGLGGVVLSYLLS----- 139
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM----- 196
E + G S LF VV Y N A A W + II +
Sbjct: 140 -------PENSAGASTALFG--VVAAEAVFLYYNRRWFGKEAVSALWNTVFIIGINLVLG 190
Query: 197 FVPGVSFLGHLGGILAG 213
PG+ GHLGG++AG
Sbjct: 191 LSPGIDNWGHLGGLIAG 207
>gi|296421368|ref|XP_002840237.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636451|emb|CAZ84428.1| unnamed protein product [Tuber melanosporum]
Length = 607
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 277 CPACTFDNSGWLSICEMCGTSRSGNDLSSDQL 308
CP CTF N WL CE+CG D+ ++QL
Sbjct: 231 CPRCTFLNHRWLRSCEICGERLISPDIPAEQL 262
>gi|399889571|ref|ZP_10775448.1| hypothetical protein CarbS_13682 [Clostridium arbusti SL206]
Length = 323
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 22/191 (11%)
Query: 32 KPPVTAALLATNTLIYLRPA-----FLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYH 86
K VT A++A N ++Y+ A F D + + + + ++ + R F F H
Sbjct: 135 KYIVTYAIIAINIVVYVISAILSSNFFDIDIRVLDFLGAKDNTLINSGEYYRLFTCMFLH 194
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
+ H+ NM SL G +E+ G ++ M LL+ + F Y
Sbjct: 195 SGIVHIASNMYSLYSIGGLVESIFGRKKYIIM------------YLLSGLIASLFSY--V 240
Query: 147 YYSEYAVGFSGVLFAM--KVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
+ S +VG SG +F + V++ S + GL + L I +P +
Sbjct: 241 FSSGISVGASGAIFGVLGGVLVISHKLKHRIGKGLFRNIIFVIAINLFI-SFTIPNIDIS 299
Query: 205 GHLGGILAGIL 215
HLGG+++GI+
Sbjct: 300 AHLGGLISGII 310
>gi|346318244|gb|EGX87848.1| Cyclin-like F-box [Cordyceps militaris CM01]
Length = 653
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 266 DTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSGNDLS 304
D RR P +WR P C + G C C RSG+D++
Sbjct: 181 DPRRLLPYVWRAPNCAYPGQGKPKFCSSCEEVRSGDDVA 219
>gi|332663565|ref|YP_004446353.1| rhomboid family protein [Haliscomenobacter hydrossis DSM 1100]
gi|332332379|gb|AEE49480.1| Rhomboid family protein [Haliscomenobacter hydrossis DSM 1100]
Length = 281
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
F IL +KD KR S F H + HL +NM+SL LE +G F + +
Sbjct: 34 FEVDSILFHKDFKRLVSSAFLHVNWMHLIFNMLSLYAFSNLLENQLGGLNFVLLYLT--- 90
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFS----GVLFAMKVVLNSRSEDYTNVHGLL 180
+L+ L LF + YS AVG S GV+FA + V
Sbjct: 91 -----SLVGGNLLALFVHRQHGSYS--AVGASGAVCGVIFASIALFPG-----IEVGTFF 138
Query: 181 VPARYAAWA-ELIIIQMFVPGVS-------FLGHLGGILAGIL 215
+P ++ W L+ + + + G+ HLGG L G+L
Sbjct: 139 LPFQFPGWLFGLLYVAISIYGIKSKRGNIGHEAHLGGALIGVL 181
>gi|289167049|ref|YP_003445316.1| hypothetical protein smi_0146 [Streptococcus mitis B6]
gi|288906614|emb|CBJ21448.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 225
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
+ P ++L + + R F + F H H NM+SL + G Q+E GS +F + + L G
Sbjct: 47 YGPAILLFPEQIWRLFSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKKFFFLYL-LSG 105
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR 184
M +L +F ++ + + G+ A+ ++ + Y G +
Sbjct: 106 M--------MGNLFVFVFSPKSLAAGASTSLYGLFAAIIILRYATRNPYIQQLG---QSY 154
Query: 185 YAAWAELIIIQMFVPGVSFLGHLGGILAG 213
+ II + +PG+S GH+GG + G
Sbjct: 155 LTLFVVNIIGSVLIPGISLAGHIGGAVGG 183
>gi|422323890|ref|ZP_16404927.1| hypothetical protein HMPREF0737_00037 [Rothia mucilaginosa M508]
gi|353344683|gb|EHB88984.1| hypothetical protein HMPREF0737_00037 [Rothia mucilaginosa M508]
Length = 270
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Query: 78 RFFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAK 135
R F H+ HL +NM+ L G+ LE MG +F + +A TL
Sbjct: 116 RLITHGFLHSQNDPMHLVWNMIYLFIFGVSLERMMGRWKFLFVYMA-------ATLGAGF 168
Query: 136 SLVLFFDYERAYYSEYAV-GFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
S+ +F Y R + V G G F ++L R +D + LL+ ++
Sbjct: 169 SVYIFDYYSRTVGASGGVYGLYGAFFV--ILLLRRQKDTARLFMLLIGID-------VVQ 219
Query: 195 QMFVPGVSFLGHLGGILAGIL 215
+F P +S GH GG+++G L
Sbjct: 220 SLFHPHISLAGHFGGLVSGAL 240
>gi|451855577|gb|EMD68869.1| hypothetical protein COCSADRAFT_33724 [Cochliobolus sativus ND90Pr]
gi|452005023|gb|EMD97479.1| hypothetical protein COCHEDRAFT_1125049 [Cochliobolus
heterostrophus C5]
Length = 262
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 6/189 (3%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
+ + + R L P H + H+ +N+ ++ + E+ G+ A+ G G
Sbjct: 56 MDFTQMHRLNLFPVLHWNFIHMIFNLFAVTPLIERFESEYGTLVTLALFTGPFGTIPGGV 115
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAE 190
L + VL + S + +L + +V+ ++ + +V +P
Sbjct: 116 YTLLEKFVLRSNTAVMGASVWVF----LLLSAEVMKTQKTNPFFSVGPYKIPTWTTPLIL 171
Query: 191 LIIIQMFVPGVSFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYL 250
++I + VP VS +GHL G AG+ YL G P I+R L+ R Y+
Sbjct: 172 IVITSILVPYVSLVGHLCG--AGLGYLWATGYIKFLVPHEKILRWIETKLNLLGRLPHYV 229
Query: 251 FRRPRIYGR 259
+ YGR
Sbjct: 230 SVDQKTYGR 238
>gi|322711970|gb|EFZ03543.1| zinc ion binding protein [Metarhizium anisopliae ARSEF 23]
Length = 349
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 222 GYSGSDPLTTIIRGATGVLSWPLRFA-RYLFRRPRIYGRGTVGGSDTRRTAPIIWRCPAC 280
G PLT G G P+ A R P+ G+GT G + + P W C C
Sbjct: 178 GTGAGGPLTREAVGTQGQALRPVTAAGASTIRDPKDRGQGTAGSGNGQ--GPDFWVCEIC 235
Query: 281 TFDNSGWLSICEMCGTSRS 299
T N CE CG+ R+
Sbjct: 236 TLHNPLQYLSCEACGSERT 254
>gi|433676794|ref|ZP_20508862.1| Rhomboid protease glpG [Xanthomonas translucens pv. translucens DSM
18974]
gi|430818120|emb|CCP39189.1| Rhomboid protease glpG [Xanthomonas translucens pv. translucens DSM
18974]
Length = 219
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 25/206 (12%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW-------FNPHLILKYKDLKRFFL 81
P PPVT ALL N ++L L + +W F+P + L +
Sbjct: 2 FPRLPPVTQALLIGNVAVFLLQLLLGDDTFAPFMLWPISNFDAFSPGQNFQIWQLLTY-- 59
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
F H SHL +NM++L G LE + G+ F + + + L + LV ++
Sbjct: 60 -GFLHGGFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVAGAG-----LCQVLVGWW 113
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAA------WAELIIIQ 195
+G SG +F + + + V L P A + L +I
Sbjct: 114 AVSNGGDPYPTLGASGGVFGLLLAFGMLFPN-QRVMLLFPPIPMKARTFVIVFGALELIM 172
Query: 196 MFV---PGVSFLGHLGGILAGILYLK 218
F PGV+ HLGG+L G L ++
Sbjct: 173 GFTGWQPGVAHFAHLGGMLFGWLLIR 198
>gi|289663205|ref|ZP_06484786.1| integral membrane protein [Xanthomonas campestris pv. vasculorum
NCPPB 702]
Length = 232
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 51/228 (22%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSL---------VPSIHEVW--------------F 65
+P PP+T ALL N ++L + L V S +W F
Sbjct: 1 MPQLPPITKALLIANIGLFLLQWAVGDLSAGVLPSDSVLSWLMLWPLSNGFDAFSPGASF 60
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
P +L Y F H +HLF+NM++L G LE + G F + +
Sbjct: 61 MPWQLLTYA---------FLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAG 111
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
+ LL+A +F A + G G+L A ++ ++ V L P
Sbjct: 112 AGVCQLLMA-----WFTQSVAPVVGASGGVFGLLLAYGMLFPNQ-----RVMLLFPPIPM 161
Query: 186 AAWAELII---IQMFV------PGVSFLGHLGGILAGILYLKLKGGYS 224
A +I+ I++F+ PGV+ HLGG+L G L ++ G S
Sbjct: 162 KARTFVIVFGAIELFLGATGWQPGVAHFAHLGGMLFGWLMIRYWRGQS 209
>gi|449440331|ref|XP_004137938.1| PREDICTED: uncharacterized protein LOC101206123 [Cucumis sativus]
Length = 397
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 70 ILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGI 129
++ L R + HA HL NM+SLL GI+LE EF + + LL + G
Sbjct: 131 VVHGNQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLE-----QEFGFIRIGLLYVISGF 185
Query: 130 TLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWA 189
L SL + S +VG SG LF + + SE TN + + AA
Sbjct: 186 GGSLLSSLFI--------QSNISVGASGALFGL--LGGMLSELITN--WTIYSNKVAALV 233
Query: 190 ELIIIQM------FVPGVSFLGHLGGILAGIL 215
L++I +P V H+GG ++G L
Sbjct: 234 TLLVIIAINLAVGILPHVDNFAHIGGFISGFL 265
>gi|333371980|ref|ZP_08463918.1| rhomboid protease GluP [Desmospora sp. 8437]
gi|332975161|gb|EGK12063.1| rhomboid protease GluP [Desmospora sp. 8437]
Length = 215
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSI 60
M GG +V +G +P+ H + R PV +LA TL++L + +I
Sbjct: 1 MHLFGGIRQVEKGGVPVFQ-HTQLPFRRFKSYFPVVTGILAIQTLLFL--------LMTI 51
Query: 61 HEVWFNPHLILKYKDLK-----------RFFLSPFYHASESHLFYNMMSLLWKGIQLETS 109
NP ++L++ L+ R F H +H +N SL G QLE
Sbjct: 52 SGGSTNPLVLLRFGALENTALLIDGEWWRLVTPVFLHIGITHFLFNSFSLYLLGPQLEWL 111
Query: 110 MGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSR 169
G F A+ + M T+ L + + A S G GV + +
Sbjct: 112 FGRWRFIALYLLTGIMGNLATVYLGEVGI------SAGASGAIYGLLGV-YVYLFLFRRG 164
Query: 170 SEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
S D GLL A ++I + P ++ HLGG++AG L
Sbjct: 165 SMDPDTGKGLL-----ALVGINLVISILTPTINLTAHLGGLVAGFL 205
>gi|456012071|gb|EMF45791.1| Rhomboid family protein [Planococcus halocryophilus Or1]
Length = 202
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 22 AFNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFL 81
+F +Y R+ PV + L+A N L+Y+ +L SL I+ + + RFF
Sbjct: 7 SFKQYLRMY---PVVSTLIALNLLVYVL-TWLPSLGQWIYFYGVGSNFYIAEGQWWRFFT 62
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
F H+ HL +NM SL G +LE G F +
Sbjct: 63 PMFLHSGVMHLLFNMFSLFLFGPELERLTGKIRFITI 99
>gi|326488163|dbj|BAJ89920.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326499095|dbj|BAK06038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 64/148 (43%), Gaps = 31/148 (20%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S + HA HL NM+SL++ G++LE G F + + L G ++L
Sbjct: 136 RLETSTWLHAGLIHLGANMISLIFVGVRLEQQFG---FWKVGLVYLFSGLGGSVL----S 188
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
VLF + +VG SG LF AM L + YTN R AA A LII
Sbjct: 189 VLFIR------NGVSVGASGALFGLLGAMLSELITNWTIYTN--------RLAAMANLII 234
Query: 194 IQM------FVPGVSFLGHLGGILAGIL 215
I +P V H+GG L G L
Sbjct: 235 IAAINLALGILPHVDNFAHIGGFLTGFL 262
>gi|157123902|ref|XP_001653965.1| ventrhoid transmembrane protein, putative [Aedes aegypti]
gi|108882867|gb|EAT47092.1| AAEL001749-PA [Aedes aegypti]
Length = 317
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 80/211 (37%), Gaps = 58/211 (27%)
Query: 23 FNEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLS 82
F YH L A + +++ RP HEVW RF
Sbjct: 80 FFTYHTLTSGQADPAGPVPIDSMFIYRP-------DKRHEVW-------------RFLFY 119
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA-LLGMSQGITLLLAKSLVLFF 141
HA HL +N++ L G+ LE GS + +A +L S G ++ F
Sbjct: 120 MVLHAGWFHLGFNLVVQLLVGLPLEMVHGSTRIGCVYLAGVLAGSLGTSV---------F 170
Query: 142 DYERAYYSEYAVGFSGVLFAM------KVVLNSRSEDYTNVH------------GLLVPA 183
D E Y VG SG ++A+ V+LN R+ Y + G + +
Sbjct: 171 DPEV-----YLVGASGGVYALLAAHLANVMLNYRNMQYGIIRLLAIFLFASCDVGFAIYS 225
Query: 184 RYAAWAELIIIQMFVPGVSFLGHLGGILAGI 214
RYA E P VS++ HL G LAG+
Sbjct: 226 RYAVEPE-----SGAPSVSYVAHLTGALAGL 251
>gi|264680766|ref|YP_003280676.1| Rhomboid-like protein [Comamonas testosteroni CNB-2]
gi|262211282|gb|ACY35380.1| Rhomboid-like protein [Comamonas testosteroni CNB-2]
Length = 500
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 24/156 (15%)
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F S F H S SHL NM+ L G LE ++G+ + A V I + A L
Sbjct: 163 FTSIFLHGSTSHLLGNMVFLFLFGFTLELALGAFTYLAFYV--------IGGIGASLFAL 214
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV- 198
F Y A G L AM V+ R + LL YA W LI++ +++
Sbjct: 215 MFYAGMGGYGLGASGAISALMAMYAVMY-RMRRIRFFYMLLFYFNYARWPALIMLPVWMG 273
Query: 199 ----------PGVSFLGHLGGILAGIL----YLKLK 220
V+++ H GG+L G L Y++L+
Sbjct: 274 VELLQHLLGGKQVAYMAHFGGLLTGALLMWSYMRLQ 309
>gi|389857558|ref|YP_006359801.1| hypothetical protein SSUST1_1941 [Streptococcus suis ST1]
gi|353741276|gb|AER22283.1| hypothetical protein SSUST1_1941 [Streptococcus suis ST1]
Length = 225
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 77/192 (40%), Gaps = 26/192 (13%)
Query: 34 PVTAALLATNTLIYLRPAFL----DSLVPSIHEVWFNPHLILKYK--DLKRFFLSPFYHA 87
PVT LLA L++L + +I E +++Y L R F H
Sbjct: 10 PVTNGLLAITALVFLLIQVFRFGQTTTAYTIFEFGGMYGQVVRYNPTQLWRLISPIFVHI 69
Query: 88 SESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF--DYER 145
H +N ++LL G QLE GS F LL + GI + VLFF D
Sbjct: 70 GWEHFIFNSITLLGLGYQLEGLFGSRRF-----FLLYLLSGI---MGNLFVLFFTPDVVG 121
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQ-MFVPGVSF 203
A S G LFA +L S Y V G RY L ++ +F P +S
Sbjct: 122 AGASTSLFG----LFAAMALLRKFSRSPYLQVLG----QRYMVLLGLNLVSGLFNPTISM 173
Query: 204 LGHLGGILAGIL 215
GH+GG + G L
Sbjct: 174 AGHIGGAVGGCL 185
>gi|322515950|ref|ZP_08068891.1| rhomboid family protein [Streptococcus vestibularis ATCC 49124]
gi|322125624|gb|EFX96954.1| rhomboid family protein [Streptococcus vestibularis ATCC 49124]
Length = 224
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 20/145 (13%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
DL R F H H +NM++L + G E G+ F + + M TLL
Sbjct: 57 DLWRLVTPIFVHIGVEHFLFNMLTLYFMGRMAEQIFGTLRFLGLYLLAGVMGNAFTLLFT 116
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
+++ A S G LFA V+L S H L+ + LI+I
Sbjct: 117 PNVI------AAGASTSLFG----LFAAIVILGYYS------HSPLLNQLGRNYLALIVI 160
Query: 195 ----QMFVPGVSFLGHLGGILAGIL 215
+F P V GHLGG++ G L
Sbjct: 161 NLIFNLFTPSVGITGHLGGLVGGAL 185
>gi|158483|gb|AAB95431.1| small optic lobes protein [Drosophila melanogaster]
Length = 1597
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSR 298
W+CPACT+DN +C++C + R
Sbjct: 934 WQCPACTYDNCAASVVCDICSSPR 957
>gi|21711741|gb|AAM75061.1| RE21811p [Drosophila melanogaster]
Length = 1593
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSR 298
W+CPACT+DN +C++C + R
Sbjct: 930 WQCPACTYDNCAASVVCDICSSPR 953
>gi|45549036|ref|NP_476738.3| small optic lobes, isoform B [Drosophila melanogaster]
gi|55584090|sp|P27398.2|CAND_DROME RecName: Full=Calpain-D; AltName: Full=Calcium-activated neutral
proteinase D; Short=CANP D; AltName: Full=Small optic
lobes protein
gi|45447065|gb|AAF50826.4| small optic lobes, isoform B [Drosophila melanogaster]
Length = 1594
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSR 298
W+CPACT+DN +C++C + R
Sbjct: 931 WQCPACTYDNCAASVVCDICSSPR 954
>gi|3004662|gb|AAC28409.1| small optic lobes [Drosophila melanogaster]
Length = 1597
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSR 298
W+CPACT+DN +C++C + R
Sbjct: 934 WQCPACTYDNCAASVVCDICSSPR 957
>gi|380484641|emb|CCF39867.1| rhomboid protein 2 [Colletotrichum higginsianum]
Length = 203
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 16/140 (11%)
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFD 142
PF H + H N+++L + E G+ A+ + L VL+
Sbjct: 5 PFIHKNFIHAIMNLLALTPLMERFEAEFGTLTSIALFIGPLSTIPA---------VLYVL 55
Query: 143 YERAYYSEYAVGFSG------VLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM 196
ER + + VG G +L M+ + S++ + +P ++++
Sbjct: 56 IERFLF-KGNVGVMGASVWVFLLLGMEAIRTSKTNPQLTIATYSIPMWTTPLILILVVTA 114
Query: 197 FVPGVSFLGHLGGILAGILY 216
VPG S LGHL G+L G L+
Sbjct: 115 LVPGTSLLGHLCGVLVGYLF 134
>gi|281361186|ref|NP_001162813.1| small optic lobes, isoform E [Drosophila melanogaster]
gi|272506193|gb|ACZ95346.1| small optic lobes, isoform E [Drosophila melanogaster]
gi|384381506|gb|AFH78571.1| FI20257p1 [Drosophila melanogaster]
Length = 1593
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSR 298
W+CPACT+DN +C++C + R
Sbjct: 930 WQCPACTYDNCAASVVCDICSSPR 953
>gi|195568003|ref|XP_002107545.1| GD17529 [Drosophila simulans]
gi|194204955|gb|EDX18531.1| GD17529 [Drosophila simulans]
Length = 1555
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSR 298
W+CPACT+DN +C++C + R
Sbjct: 926 WQCPACTYDNCAASVVCDICSSPR 949
>gi|440729654|ref|ZP_20909776.1| hypothetical protein A989_00090 [Xanthomonas translucens DAR61454]
gi|440380945|gb|ELQ17496.1| hypothetical protein A989_00090 [Xanthomonas translucens DAR61454]
Length = 218
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 25/206 (12%)
Query: 29 LPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW-------FNPHLILKYKDLKRFFL 81
P PPVT ALL N ++L L + +W F+P + L +
Sbjct: 2 FPRLPPVTQALLIGNVAVFLLQLLLGDDTFAPFMLWPISNFDAFSPGQNFQIWQLLTY-- 59
Query: 82 SPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFF 141
F H SHL +NM++L G LE + G+ F + + + L + LV ++
Sbjct: 60 -GFLHGGFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVAGAG-----LCQVLVGWW 113
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAA------WAELIIIQ 195
+G SG +F + + + V L P A + L +I
Sbjct: 114 AVSNGGDPYPTLGASGGVFGLLLAFGMLFPN-QRVMLLFPPIPMKARTFVIVFGALELIM 172
Query: 196 MFV---PGVSFLGHLGGILAGILYLK 218
F PGV+ HLGG+L G L ++
Sbjct: 173 GFTGWQPGVAHFAHLGGMLFGWLLIR 198
>gi|357455203|ref|XP_003597882.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
gi|355486930|gb|AES68133.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
Length = 345
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 43/178 (24%)
Query: 69 LILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQG 128
L++ ++ RF F HA HL NM SLL+ G++LE NEF + + +L + G
Sbjct: 102 LVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLE-----NEFGFLKIGVLYLLSG 156
Query: 129 I--TLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAM-----------------KVVLNS- 168
+LL S++ D + + +VG SG LF + KV+ N
Sbjct: 157 FGGSLL---SILHMGDVKAP--NTVSVGASGALFGLLGAMLSELLTNWTIYLNKVLYNDI 211
Query: 169 ---RSEDYTNVHGLLVPAR----YAAWAELIII------QMFVPGVSFLGHLGGILAG 213
+HG+ V A+ AA L++I F+P V H+GG L+G
Sbjct: 212 FCCLERKREKIHGVGVCAKGQCSCAALTSLLLIIGLNLAVGFIPHVDNSAHIGGFLSG 269
>gi|319948114|ref|ZP_08022278.1| rhomboid family protein [Dietzia cinnamea P4]
gi|319438225|gb|EFV93181.1| rhomboid family protein [Dietzia cinnamea P4]
Length = 244
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 73/192 (38%), Gaps = 28/192 (14%)
Query: 22 AFNEYHRLPWKPPVTAALLATNTLIYL------RPAFLDSLVPSIHEVWFNPHLILKYKD 75
A + + RL PVTA L+ N +Y+ R +S P ++ +
Sbjct: 10 AVSRFFRLQ---PVTAWLITANLAVYVATAAQARSIMANSASALFETTALFPPMVAVRDE 66
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLA 134
R S F H HL NM L G+ +E S+G F + +V+ LG
Sbjct: 67 WWRLLTSAFQHFGPMHLLLNMYMLWILGLGIERSIGHARFLGLYLVSALG---------- 116
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
S+ + F + A + + G++ A +V S D + LLV I +
Sbjct: 117 GSVAVMFTSQNALTAGASGAIFGLMGAYAIVAMSLRLDVKGIGLLLVLN--------IGV 168
Query: 195 QMFVPGVSFLGH 206
VPGVS H
Sbjct: 169 SFIVPGVSLGAH 180
>gi|190348169|gb|EDK40578.2| hypothetical protein PGUG_04676 [Meyerozyma guilliermondii ATCC
6260]
Length = 291
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITL-LL 133
+L R + P H H F N++SL + E G+ + GITL LL
Sbjct: 80 ELNRISMYPLAHTGIFHWFVNVISLSPLLARFEKVHGT------------VYTGITLNLL 127
Query: 134 AKSLVLFFDYERAYYS--EYAVGFSGVLFAMKVVLNSRSEDYTNV-----HGLLVPARYA 186
A S L + S G S + F+ + + Y + +P +Y+
Sbjct: 128 AVSTALIYSLLAGIISPSTRVEGLSAICFSFLEFYALKEQSYYPIAFQWGDRYRLPTKYS 187
Query: 187 AWAELIIIQMFVPGVSFLGHLGGILAGIL----YLKL 219
A+ LII + VP S LGHL GI +G L YLK+
Sbjct: 188 AFVVLIITFILVPNSSLLGHLAGIGSGYLLAENYLKI 224
>gi|34556529|ref|NP_906344.1| DNA repair protein RadA [Wolinella succinogenes DSM 1740]
gi|34482243|emb|CAE09244.1| DNA REPAIR PROTEIN RADA HOMOLOG DNA REPAIR PROTEIN SMS HOMOLOG
[Wolinella succinogenes]
Length = 447
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 274 IWRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLS----------RHSNIPLEELRHRR 323
++ C C F + WL C CG S +LS+ Q+S + + IP+ ++ R
Sbjct: 7 LFECQHCGFQSPKWLGKCSQCGAWESFIELSASQISTLKSLSPSSPKSTPIPITQIEQER 66
Query: 324 IERF 327
+++F
Sbjct: 67 VDKF 70
>gi|332298948|ref|YP_004440870.1| rhomboid family protein [Treponema brennaborense DSM 12168]
gi|332182051|gb|AEE17739.1| Rhomboid family protein [Treponema brennaborense DSM 12168]
Length = 213
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H S SH+ +NM+ + + G+ +E ++GS EF LL GI ++ F Y
Sbjct: 64 FVHGSFSHILFNMLGIFFFGVAVERAIGSKEF-----LLLYFCSGILC----GVISFAIY 114
Query: 144 ERAYYSEYAVGFSGVLFAMKV---VLNSRSEDYTNVHGLL---VPARYAAWAEL-IIIQM 196
+ +G SG ++A+ + V+ RS + + G+L P A +A + I Q+
Sbjct: 115 YATGTFVFLMGASGAIYALLLTYAVIFPRSRIF--IWGILPIPAPLLIAIYAGIEIASQL 172
Query: 197 FV--PGVSFLGHLGGILAGILYLKLKGG 222
F GV+ + HL G LYL ++ G
Sbjct: 173 FSLRDGVAHMAHLTGFAVAWLYLMIRMG 200
>gi|346306942|ref|ZP_08849090.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
gi|345907306|gb|EGX77017.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
Length = 199
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 33 PPVTAALLATNTLIYLRPAFL----DSLVPSIHEVWFNPHLILKYKDLKRFFL---SPFY 85
P T A+ A N LI+L +F+ DS H + P+L+ + +R++ S F
Sbjct: 8 PICTIAIAAANVLIFLGLSFMGMTEDSAFMMEHGAMYVPYLM----NGERYYTLITSMFL 63
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
H SHL NM+ LL G LE +G F + + + L+ + +FD +
Sbjct: 64 HFGFSHLMNNMVMLLVIGYSLEPEIGKIRFLFIYLG--------SGLMGNLVSAWFDVSQ 115
Query: 146 AYYSEYAVGFSGVLFAMKVVL------NSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
Y+ A G SG +F + L N + GL++ A + +
Sbjct: 116 GSYAVSA-GASGAIFGIVGALLYVAIRNHGRVGEISTRGLVLMAGLSLYYGFT-----AQ 169
Query: 200 GVSFLGHLGGILAGIL 215
GV H+GG+++G L
Sbjct: 170 GVDNAAHIGGLISGFL 185
>gi|45556136|ref|NP_996524.1| small optic lobes, isoform D [Drosophila melanogaster]
gi|45447067|gb|AAS65411.1| small optic lobes, isoform D [Drosophila melanogaster]
Length = 1240
Score = 38.1 bits (87), Expect = 6.0, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSR 298
W+CPACT+DN +C++C + R
Sbjct: 577 WQCPACTYDNCAASVVCDICSSPR 600
>gi|309811347|ref|ZP_07705134.1| peptidase, S54 family [Dermacoccus sp. Ellin185]
gi|308434654|gb|EFP58499.1| peptidase, S54 family [Dermacoccus sp. Ellin185]
Length = 311
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES- 90
+P VT ++A L++L D+L + V + + R+ S F H + +
Sbjct: 89 RPVVTIGIIAICCLVWLGQLASDALYRDVSFV-----AVFARDEPWRYLTSGFAHDTGTP 143
Query: 91 -HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERAYY 148
HL +NMM+L + G LE +G F A+ ++++LG S ++ A S L D + +
Sbjct: 144 MHLLFNMMALYFMGQYLEPLIGRVRFGALYLLSVLGGSVVYQIMTAPSSQL--DLLTSGW 201
Query: 149 SEYAVGFSGVLFAM---KVVLNSR 169
VG SG +F + VV N R
Sbjct: 202 VTPLVGASGGVFGLFLAVVVFNRR 225
>gi|326778165|ref|ZP_08237430.1| Peptidase S54, rhomboid domain protein [Streptomyces griseus
XylebKG-1]
gi|326658498|gb|EGE43344.1| Peptidase S54, rhomboid domain protein [Streptomyces griseus
XylebKG-1]
Length = 300
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H H+ +NM+ L W G QLE ++G + + A+ LL+
Sbjct: 139 RLVTSMFLHQEVVHIAFNMLGLWWLGGQLEAALGRSRYLAL------------YLLSGLA 186
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
Y A ++ ++G SG ++ A V++ + D V LL A ++
Sbjct: 187 GSALTYLIAAPNQGSLGASGAVYGLFGATAVLMRRMNYDMRPVLVLL--------AINMV 238
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
G+++ H+GG++AG++
Sbjct: 239 FTFTWGGIAWEAHVGGLIAGVV 260
>gi|405362758|ref|ZP_11025811.1| rhomboid family protein [Chondromyces apiculatus DSM 436]
gi|397090218|gb|EJJ21092.1| rhomboid family protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 243
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYE 144
H HL +NM ++ G LE +GS F + +V LG S A SL+ FD
Sbjct: 95 HGGAIHLLFNMSVVVTLGFTLERGIGSLRFLGLSLVTALGAS-------AFSLIFDFDVP 147
Query: 145 RAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
S +G++G + + R + + W + + +P VS+
Sbjct: 148 TVGASGMILGWAGAMLPVAT-REGRRDLFI-------------WLAQVAVLSLLPFVSWA 193
Query: 205 GHLGGILAGI 214
GHLGG L G+
Sbjct: 194 GHLGGFLFGL 203
>gi|386002483|ref|YP_005920782.1| rhomboid family protein [Methanosaeta harundinacea 6Ac]
gi|357210539|gb|AET65159.1| Rhomboid family protein [Methanosaeta harundinacea 6Ac]
Length = 236
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 22/140 (15%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVV--ALLGMSQGITLLLAKSLVLFF 141
F HA +HL +NM+ L + G +LE +G + F + + L+ + +L A S+
Sbjct: 99 FVHADMAHLLFNMIFLFFFGTELERRVGESRFLQIFIISGLVAAIGQMAVLPAGSM---- 154
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF---- 197
VG SG LF + L + + T + ++P A L I F
Sbjct: 155 -----------VGASGALFGVMGCLAVIAPEITVLLFFVIPLSIRAAVVLFAIIDFAFMG 203
Query: 198 -VPGVSFLGHLGGILAGILY 216
++ + H+ G+L G+ Y
Sbjct: 204 SADNIAHMAHIAGLLVGLAY 223
>gi|260587072|ref|ZP_05852985.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|331082843|ref|ZP_08331965.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542562|gb|EEX23131.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|330400172|gb|EGG79821.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 220
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 27/199 (13%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEV-W---FNPHLILKYKDLKRFFLSP 83
R + PV L+ N L++L S + + H + W + P +L+ + R S
Sbjct: 24 RKRKEVPVNTLLIGINLLVFLLVEVTGSSLDTYHILRWGGCYTPA-VLQSHEYYRLISSM 82
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HL NM+ LL+ G LE ++G ++ +++ LG GI A L ++ +
Sbjct: 83 FLHFGIQHLGNNMLVLLFLGDCLERNIGKIKY--LLIYFLG---GIG---ANVLSIYLEI 134
Query: 144 ERAYYSEYAVGFSGVLFAM------KVVLN-SRSEDYTNVHGLLVPARYAAWAELIIIQM 196
+ Y A G SG +FA+ V+ N R E++T L+V A + + M
Sbjct: 135 KNGKYFISA-GASGAVFAVIGALIYIVIANRGRIENFTTRQ-LIVMAGLSLY-----FGM 187
Query: 197 FVPGVSFLGHLGGILAGIL 215
GV H GG+++G +
Sbjct: 188 TSTGVDNAAHFGGLISGFI 206
>gi|406830563|ref|ZP_11090157.1| rhomboid family protein [Schlesneria paludicola DSM 18645]
Length = 295
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 71 LKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
+ + ++ R F H HL +NM+ G Q+E +GS +F MV+ + +S
Sbjct: 147 INHGEVWRLITPIFLHFGPMHLIFNMIWTYQLGTQIEPKIGSFKFLLMVIVIAALSNAAQ 206
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAA--- 187
F+ + R + G SGV++ + + R + GL +P +
Sbjct: 207 ---------FWFHPRNLFG----GMSGVVYGLFGYIWVRGK-LEPESGLFLPQQTITFML 252
Query: 188 -WAELIIIQMFVPGVSFLGHLGGILAGI 214
W L + + +P V+ H GG+LAG+
Sbjct: 253 LWHVLCSVGV-IPNVANWAHGGGLLAGV 279
>gi|365860674|ref|ZP_09400469.1| hypothetical protein SPW_0771 [Streptomyces sp. W007]
gi|364009831|gb|EHM30776.1| hypothetical protein SPW_0771 [Streptomyces sp. W007]
Length = 220
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 35 VTAALLATNTLIYL----RPAFLDSLVPSIHEVWFNPHLILKYKDLK-----RFFLSPFY 85
VT LL N ++L RPA ++ L ++ W +++ + R S F
Sbjct: 8 VTKILLGINLAVFLLVSIRPALVNDL--TLLGRWDPAPMLVPATGVAEGQWYRLVTSMFL 65
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAM 118
H H+ +NM+ L W G QLE ++G + + A+
Sbjct: 66 HQEVVHIAFNMLGLWWLGGQLEAALGRSRYLAL 98
>gi|357412396|ref|YP_004924132.1| rhomboid family protein [Streptomyces flavogriseus ATCC 33331]
gi|320009765|gb|ADW04615.1| Rhomboid family protein [Streptomyces flavogriseus ATCC 33331]
Length = 300
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 27/144 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H H+ +NM+ L W G LE+++G + A+ + +T L+A
Sbjct: 138 RLVTSTFLHQEVWHIAFNMLGLWWLGGPLESALGRARYLALYLLSGLAGSALTYLIADP- 196
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
++ +G SG +F A V++ + D V LLV + +
Sbjct: 197 -----------AQGTLGASGSVFGLLGATAVLMRRMNYDMRPVIALLV---------VNL 236
Query: 194 IQMFVP--GVSFLGHLGGILAGIL 215
I F P G+++ H+ G++AG L
Sbjct: 237 IFTFNPWGGIAWQAHVEGLIAGAL 260
>gi|345482414|ref|XP_001607800.2| PREDICTED: rhomboid-related protein 3 [Nasonia vitripennis]
Length = 415
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 38/162 (23%)
Query: 72 KYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA-LLGMSQGIT 130
K +L RF F HA HL +N+ + G+ LE GS AA+ +A +L S G +
Sbjct: 228 KRLELWRFAFYMFLHAGWLHLLFNLGVQVVVGLPLEMVHGSFRIAAVYMAGVLAGSLGTS 287
Query: 131 LLLAKSLVLFFDYERAYYSEYAVGFSGVLFAM------KVVLNSRSEDYTNVH------- 177
+ FD + Y VG SG ++A+ V+LN + ++ V
Sbjct: 288 V---------FDTDV-----YLVGASGGVYALLAAHLANVLLNYNNMEFGIVRLIGIFVI 333
Query: 178 -----GLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGI 214
G + RYAA Q P VS++ HL G LAG+
Sbjct: 334 ASADVGFAIYDRYAAEQ-----QQLGPPVSYVAHLTGALAGL 370
>gi|417846854|ref|ZP_12492838.1| peptidase, S54 family [Streptococcus mitis SK1073]
gi|339457974|gb|EGP70527.1| peptidase, S54 family [Streptococcus mitis SK1073]
Length = 224
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
+ P + L + + R F + F H H NM+SL + G Q+E GS +F + + L G
Sbjct: 47 YGPVIRLFPEQIWRLFSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKQFFFLYL-LSG 105
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR 184
M +L +F ++ + + G+ A+ V+ + Y G +
Sbjct: 106 M--------MGNLFVFVFSPKSLAAGASTSLYGLFAAIIVLRYATRNPYIQQLG---QSY 154
Query: 185 YAAWAELIIIQMFVPGVSFLGHLGGILAG 213
+ II + +PG+S GH+GG + G
Sbjct: 155 LTLFVVNIIGSVLIPGISLAGHIGGAVGG 183
>gi|319937466|ref|ZP_08011871.1| hypothetical protein HMPREF9488_02707 [Coprobacillus sp. 29_1]
gi|319807306|gb|EFW03915.1| hypothetical protein HMPREF9488_02707 [Coprobacillus sp. 29_1]
Length = 213
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 24 NEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW----FNPHLILKYKDLKRF 79
N+ + + PVT+ L+A +IY+ L +++E +NP + + R
Sbjct: 3 NQLLKQYKRAPVTSVLIALCVVIYVISFLLYGEEMNVYEGMAFGGYNPVFVQLNHEYYRL 62
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
+ F H H+ N SL G+ +E+S+ ++ + L +S T L L L
Sbjct: 63 ITANFIHFGIIHIAVNCYSLYGIGMFIESSLKPKKYCIV----LFISALATTGLPYLLYL 118
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
+E S G SGV+F + L + + Y ++ + ++ I + VP
Sbjct: 119 INGFEANTVSG---GISGVIFGLIGALGALALKYRDIFLDVFRQLAPNLLLMLFISVVVP 175
Query: 200 GVSFLGHLGGILAGIL 215
+S GH+ G++ G +
Sbjct: 176 SISLSGHVAGMIGGFI 191
>gi|171914248|ref|ZP_02929718.1| hypothetical protein VspiD_23755 [Verrucomicrobium spinosum DSM
4136]
Length = 1365
Score = 37.7 bits (86), Expect = 6.6, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 5 GGGWRVSRGMLPLLALHAFNEYH----RLPWK-------PPVTAALLATNTLIYLRP--- 50
G WR+ GM YH R+PW P A L NT ++
Sbjct: 344 GEPWRMDLGMADAEVSARVQRYHAISPRIPWGGSMGGTVAPTVAIPLVDNTGAPVKDDRL 403
Query: 51 -AFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLW 101
A LD LV + NP L + ++ RFFL+ A E +LF LLW
Sbjct: 404 YATLDELVYDRNRAAQNPALTWRDIEIGRFFLTAHSRAPELNLFNKPRILLW 455
>gi|453078406|ref|ZP_21981137.1| serine peptidase [Rhodococcus triatomae BKS 15-14]
gi|452757162|gb|EME15569.1| serine peptidase [Rhodococcus triatomae BKS 15-14]
Length = 252
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 39/196 (19%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNP---HLILKYKDLKRFFLSP----- 83
P VT AL+A N ++L A V + NP + R+ LSP
Sbjct: 15 TPVVTYALMAINVAVFLITALQAQSVMDNGRGFVNPLSGAAVFDSDLFGRWVLSPLDVAD 74
Query: 84 ----------FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLL 132
F H HL NM +L G E +G + + + +++LLG S +
Sbjct: 75 GDWMRVLGSGFLHFGLVHLAVNMFALYILGRDTELVLGRSRYVCVYLISLLGGSASV--- 131
Query: 133 LAKSLVLFFDYERAYYSEYAVG-FSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
+E ++ A G G++ A V+L V G++ A
Sbjct: 132 --------MAFENGGFTAGASGAIFGIMGAQAVILLKLRRSPAPVIGVI--------AIN 175
Query: 192 IIIQMFVPGVSFLGHL 207
+II + VPG+S GH+
Sbjct: 176 VIISVTVPGISLFGHM 191
>gi|182437510|ref|YP_001825229.1| hypothetical protein SGR_3717 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466026|dbj|BAG20546.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 285
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S F H H+ +NM+ L W G QLE ++G + + A+ LL+
Sbjct: 124 RLVTSMFLHQEVVHIAFNMLGLWWLGGQLEAALGRSRYLAL------------YLLSGLA 171
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
Y A ++ ++G SG ++ A V++ + D V LL A ++
Sbjct: 172 GSALTYLIAAPNQGSLGASGAVYGLFGATAVLMRRMNYDMRPVLVLL--------AINMV 223
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
G+++ H+GG++AG++
Sbjct: 224 FTFTWGGIAWEAHVGGLIAGVV 245
>gi|395533255|ref|XP_003768676.1| PREDICTED: nuclear protein localization protein 4 homolog
[Sarcophilus harrisii]
Length = 730
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 254 PRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS 299
P ++ G +GGS T T+ +W C CTF N CEMC R+
Sbjct: 686 PGMHEYGAIGGS-THATSSAMWACQHCTFMNQPGTDHCEMCSLPRT 730
>gi|322378009|ref|ZP_08052496.1| rhomboid family protein [Streptococcus sp. M334]
gi|321280991|gb|EFX58004.1| rhomboid family protein [Streptococcus sp. M334]
Length = 225
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R F + F H H NM+SL + G Q+E GS +F + + L GM +L
Sbjct: 60 RLFSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKKFFFLYL-LSGM--------MGNL 110
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMF 197
+F ++ + + GV A+ V+ + Y G + + II +
Sbjct: 111 FVFVFSPKSLAAGASTSLYGVFAAIIVLRYATRNPYIQQLG---QSYLTLFVVNIIGSVL 167
Query: 198 VPGVSFLGHLGGILAGIL 215
+PG+S GH+GG + G L
Sbjct: 168 IPGISLAGHIGGAVGGAL 185
>gi|300025024|ref|YP_003757635.1| rhomboid family protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526845|gb|ADJ25314.1| Rhomboid family protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 219
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 39/225 (17%)
Query: 24 NEYHRLPWKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKD-----LKR 78
++ L P VT L+A N L++L L++ I + F P ++ D L
Sbjct: 6 DDDSALRTTPVVTYGLIAINVLVFLLE--LNAGDQFIQDWSFIPS---RFNDDPAGNLPT 60
Query: 79 FFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV 138
+ F H HLF NM+ L G +E G F A +A GI A+
Sbjct: 61 LLTAMFMHGGWMHLFGNMLYLYIFGDNIEDRFGHVRFLAFYLAC-----GIAATFAQY-- 113
Query: 139 LFFDYERAYYSEYAVGFSG----VLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIII 194
Y + S VG SG VL A ++ D + ++ A I++
Sbjct: 114 ----YVNSGSSIPNVGASGAIAGVLGAYILLFPHARVDVFVIRQIVSLPALAVIGFWIVL 169
Query: 195 QMF--------------VPGVSFLGHLGGILAGILYLKLKGGYSG 225
Q+F V GV+++ H+GG +AG++ L GG G
Sbjct: 170 QLFSSVGSIARTDETADVGGVAYMAHVGGFVAGLVLAFLLGGRGG 214
>gi|385263137|ref|ZP_10041231.1| peptidase, S54 family [Streptococcus sp. SK643]
gi|385188675|gb|EIF36153.1| peptidase, S54 family [Streptococcus sp. SK643]
Length = 224
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG 124
++P + L + R F + F H H N++SL + G Q+E +GS +F + + L G
Sbjct: 47 YSPAIRLVPSQIWRLFSAIFVHIGWEHFIVNILSLYFLGRQVEEIVGSKQFFFLYL-LSG 105
Query: 125 MSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPA 183
M +L +F RA + + G LFA +VL S + Y G +
Sbjct: 106 M--------MGNLFVFAYTPRALAAGASTSLYG-LFAAIIVLRYASRNPYIQQLG---QS 153
Query: 184 RYAAWAELIIIQMFVPGVSFLGHLGGILAG 213
+ +I + +PG+S GH+GG + G
Sbjct: 154 YMTLFVVNLIGSILIPGISLAGHIGGAVGG 183
>gi|440903001|gb|ELR53718.1| Zinc finger Ran-binding domain-containing protein 3 [Bos grunniens
mutus]
Length = 1070
Score = 37.7 bits (86), Expect = 7.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 275 WRCPACTFDNSGWLSICEMCGTSRSGNDLSSDQLSRHSN 313
W+C CT+ N+ L CEMC R G D S +++ N
Sbjct: 622 WQCAFCTYINNSVLPYCEMCENPRGGADSLSQTQNKNKN 660
>gi|357400681|ref|YP_004912606.1| hypothetical protein SCAT_3097 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386356736|ref|YP_006054982.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337767090|emb|CCB75801.1| conserved membrane protein of unknown function [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365807244|gb|AEW95460.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 282
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 35 VTAALLATNTLIYLR-PAFLDSLVPSI--HEVW--FNPHLILKYKDLKRFFLSPFYHASE 89
+T L+ N ++L A DSLV + + W +P + R + F H +
Sbjct: 71 ITMILIGINVAVFLAVQAVGDSLVQDLILYGAWPPVDPTSGVAEGQWYRLLTATFLHQNV 130
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAK 135
H+ +NM+SL W G LE ++G F A+ +++ LG S ++ LLA
Sbjct: 131 MHIGFNMLSLWWIGPGLEVALGRVRFLAVYLLSALGGS-ALSFLLAN 176
>gi|327349312|gb|EGE78169.1| rhomboid protein 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 275
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 17/193 (8%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-MSQGITLLL 133
L R P H H F+N+++L + E G+ A+ V L + G+ LL
Sbjct: 62 SLYRLNTYPIIHNGLFHTFWNIVALTPLLERFEAEHGTLTSVALFVGPLSTLPAGLYLLF 121
Query: 134 AKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAE--L 191
K ++ AV S V + + + + TN H ++ R W L
Sbjct: 122 EKVIL---------RGNTAVLGSSVWIFLLLGIEAIKTFQTNPHFVIGTYRIPTWTTPLL 172
Query: 192 IIIQMF--VPGVSFLGHLGGILAGILYLKLKGGYSGSD---PLTTIIRGATGVLSWPLRF 246
++I +F VP S LGHL G+ G +Y+K + G P I+R G L+
Sbjct: 173 LVILVFALVPNTSLLGHLSGLAVGYVYMKNEVGLGYLKFLVPPEKILRWIEGKLNLLAIL 232
Query: 247 ARYLFRRPRIYGR 259
Y+ + YGR
Sbjct: 233 PHYVSVDQKTYGR 245
>gi|311748629|ref|ZP_07722414.1| rhomboid family protein [Algoriphagus sp. PR1]
gi|126577155|gb|EAZ81403.1| rhomboid family protein [Algoriphagus sp. PR1]
Length = 310
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H H+ +NM+ L W G + +GS + A + V L G++ + LL +L +F
Sbjct: 78 FLHEGIFHILFNMLFLFWFGQLVHQFLGSRKLANLYV-LGGLAGALFYLLIYNLAPYF-- 134
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSF 203
A S +G S +FA+ V + S + T LL P + A +I F
Sbjct: 135 RGAIDSSMMLGASAGVFAIVVGAATLSPNTTFFLILLGPVKIKYIAIFYVILSFANSAGA 194
Query: 204 -----LGHLGGILAGILYL 217
L HLGG L G Y+
Sbjct: 195 NAGGELAHLGGALLGYFYI 213
>gi|22122915|gb|AAM92298.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 29/147 (19%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + HA HL NM+SL+ G++LE +F M + ++ + GI + SL
Sbjct: 119 RLVTCIWLHAGVVHLLANMLSLVLIGLRLE-----QQFGYMRIGIIYLVSGIGGSVLSSL 173
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+ + +VG SG LF AM L + YTN LV LI+
Sbjct: 174 FI--------RNSISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTL-------LIV 218
Query: 194 IQM-----FVPGVSFLGHLGGILAGIL 215
I + +P V H+GG L G L
Sbjct: 219 IAINLAIGILPHVDNFAHIGGFLTGFL 245
>gi|156741085|ref|YP_001431214.1| rhomboid family protein [Roseiflexus castenholzii DSM 13941]
gi|156232413|gb|ABU57196.1| Rhomboid family protein [Roseiflexus castenholzii DSM 13941]
Length = 281
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 28 RLP-WKPPVTAALLATNTLIYLRPAFLDSLVPSIHEVW--FNPHLILKYKD--------- 75
R P + P V LL N ++++ P+FLD + I ++ LI KD
Sbjct: 42 RFPLFTPWVARVLLTINIIVFVVPSFLDVIGVRIAGTVSVYDFLLIWGAKDNAAIFVGGQ 101
Query: 76 LKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
RF + F H +HLF+N +L G + E G+ F A+ + L G+ G+
Sbjct: 102 YYRFLTAMFLHGGLAHLFFNSFALYSLGFETERLFGAQRFLAIYM-LAGLGGGVA 155
>gi|83775326|dbj|BAE65448.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 555
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 263 GGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSG--NDLSSDQLSRHSNIPLEELR 320
GG DT ++ + CP CTF N L CE+CG S SG +S+Q S PL L+
Sbjct: 166 GGQDTAQS---LVSCPRCTFVNHPSLHECEICGASLSGLLETPNSNQHRAESPAPLIHLQ 222
>gi|396586115|ref|ZP_10486089.1| peptidase, S54 family [Actinomyces sp. ICM47]
gi|395546456|gb|EJG14095.1| peptidase, S54 family [Actinomyces sp. ICM47]
Length = 241
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 24/187 (12%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
P VT A++A L+YL SL S+ V P ++ F H H
Sbjct: 22 APVVTYAMMAICILMYLATWVFPSLKSSLALV---PLFLMSRP--WTILTGAFLHGGLLH 76
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
+ +NM+SL W G +E +G F + V LL G +LA L+ + +
Sbjct: 77 ILFNMLSLYWVGRAIEPVLGWWRF--LTVYLLSALGGSAFILAWCLI-----QPSELLVG 129
Query: 152 AVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHL 207
VG SG +F A+ V+ D T + LL ++ G+S+ H+
Sbjct: 130 TVGASGAVFGLFGAVFVLQRLGGADTTPILTLL--------GINLVYGFLASGISWQAHI 181
Query: 208 GGILAGI 214
GG + G+
Sbjct: 182 GGAVVGV 188
>gi|436837540|ref|YP_007322756.1| rhomboid family protein [Fibrella aestuarina BUZ 2]
gi|384068953|emb|CCH02163.1| rhomboid family protein [Fibrella aestuarina BUZ 2]
Length = 275
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 57/229 (24%)
Query: 58 PSIHEVW-FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA 116
PS+ E + F IL +++ R + F H HLF+NM +LL FA
Sbjct: 26 PSVFERYAFTVDGILTHREYSRLISAGFVHVDWWHLFFNMYALL-------------SFA 72
Query: 117 AMVVALLGMSQGITLLLAKSL---VLFFDYERAYYSEYAVGFS----GVLFAMKVVLNSR 169
V ++G + + L LA + +L R S AVG S G++FA V+
Sbjct: 73 GTVEWVVGPWKVLILYLASLVGGNLLALYIHRNDSSYRAVGASGAVAGLIFATIVLYPGL 132
Query: 170 SEDYTNVHGLLVPARYAAWAELIIIQMF-VPGVSFL-------GHLGGILAGILYLKLKG 221
S + L +P R AW ++ +F + G+ L HLGG LAGI + L
Sbjct: 133 S-----ISPLFLPFRMPAWVFGLVYTLFSIYGLKSLNDNIGHDAHLGGALAGIFTICLLD 187
Query: 222 GYSGSDPLTTIIRGATGVLSWP---------LRFARYLFRRPR-IYGRG 260
T ++R ++WP L F ++ +RP +Y RG
Sbjct: 188 --------TDVVR-----VNWPFVLLLTAPTLVFLFFIIKRPDWLYIRG 223
>gi|242042499|ref|XP_002468644.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
gi|241922498|gb|EER95642.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
Length = 326
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R S + HA HL NM+ LL+ G++LE G A+ + G+ + SL
Sbjct: 116 RLLSSMWLHAGVLHLVANMLCLLFVGMRLEQQFGYVRIGAIYIL-----SGLGGAVLSSL 170
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+ + +VG SG LF AM L + YTN + + A L++
Sbjct: 171 FI--------RNHISVGASGALFGLLGAMLSELITNWTIYTNKAVAVATLLFVAAVNLVL 222
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
+P V+ H+GG LAG L
Sbjct: 223 --GILPHVNNFAHIGGFLAGFL 242
>gi|256843575|ref|ZP_05549063.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256850051|ref|ZP_05555481.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262047339|ref|ZP_06020296.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|293381863|ref|ZP_06627832.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|423319243|ref|ZP_17297119.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|423320787|ref|ZP_17298659.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
gi|256614995|gb|EEU20196.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713023|gb|EEU28014.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260572313|gb|EEX28876.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|290921584|gb|EFD98617.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|405589376|gb|EKB62943.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|405599039|gb|EKB72221.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
Length = 228
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 18/142 (12%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R F + F H HL N + + + G +E MG F +V LL G + LA
Sbjct: 60 RLFTAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHVRF--LVTYLLAGVGGNLMSLA--- 114
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVP--ARYAAWAELI--I 193
F +R + + G+ AM + N+H ++ R A LI
Sbjct: 115 ---FSADRGLSAGASTALFGLFGAMTAI------GLRNLHNPMIAFLGRQAFVLALINLA 165
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
+ +FVPG+ GH+GG++AG L
Sbjct: 166 LDIFVPGIDIWGHIGGLIAGFL 187
>gi|23098073|ref|NP_691539.1| hypothetical protein OB0618 [Oceanobacillus iheyensis HTE831]
gi|22776298|dbj|BAC12574.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 258
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 34 PVTAALLATNTLIYLRPAFLDSLVPSIHEVW---FNPHLILKYKDLKRFFLSPFYHASES 90
PV + L+ N ++ L + EV+ FN + + R F H
Sbjct: 17 PVVSVLVIINITLWAINDLLQLQIGRFIEVYGIGFNAAI--EAGQWWRLITPIFLHGGLM 74
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSE 150
H+ +N SL+ G LE +G +F ++A LG + + ++ +FF +Y
Sbjct: 75 HMLFNSFSLVLFGPALEQMLGRFKF---ILAYLGTA------ITANIAIFFLQPMSYAHL 125
Query: 151 YAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFV-PGVSFLGHLGG 209
A G LF + V + +D + A + ++ F+ P +S LGHL G
Sbjct: 126 GASGAIFGLFGIYVFMVMYRKDLIDQSS---SQMIAVIVGIGLVMTFIRPNISILGHLFG 182
Query: 210 ILAGILYLKL 219
L+GI+Y L
Sbjct: 183 FLSGIIYAPL 192
>gi|406885514|gb|EKD32686.1| hypothetical protein ACD_77C00001G0004 [uncultured bacterium]
Length = 226
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLV-PSIHEVWFNPHLILKYKDLKRFFLSPFYHASESH 91
PPV L+ N L+ L F + + +F L Y+ + F+ H + H
Sbjct: 14 PPVIKNLVIINGLMLLITFFAGNFMYEKFSLFYFGSELFRPYQFVTHMFM----HGNFIH 69
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFD 142
LF+NM SL+ G+ LE GS +F + M G+ SLVL+ D
Sbjct: 70 LFFNMYSLIIFGVVLEQVWGSKKF-----FIYYMVTGLGAAALHSLVLYID 115
>gi|154508338|ref|ZP_02043980.1| hypothetical protein ACTODO_00835 [Actinomyces odontolyticus ATCC
17982]
gi|153797972|gb|EDN80392.1| peptidase, S54 family [Actinomyces odontolyticus ATCC 17982]
Length = 231
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIH-EVWFNPHLILKYKDLKRFFLSPFYHASES 90
P VT A++A L+Y+ + LVP+ + P ++ + F H
Sbjct: 12 TPVVTYAMMAICVLMYV----VTLLVPTTKLSLALVPARLMAHP--WTVLTGAFLHGGIM 65
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
H+ +NM+SL W G +E +G F + +V+ LG G +L L+ + S
Sbjct: 66 HILFNMLSLYWVGRAIEPVLGRWRFLTLYLVSALG---GSAFILVWCLI---QPSEIFVS 119
Query: 150 EYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
VG SG +F A+ V+ D T + LL ++ V G+S+ G
Sbjct: 120 T--VGASGAVFGLFGAVFVLQRLGGSDTTAILTLL--------GINLVYGFMVSGISWQG 169
Query: 206 HLGGILAGI 214
H+GG +AG+
Sbjct: 170 HIGGAIAGV 178
>gi|391868556|gb|EIT77769.1| vacuolar sorting protein [Aspergillus oryzae 3.042]
Length = 555
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 263 GGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRSG--NDLSSDQLSRHSNIPLEELR 320
GG DT ++ + CP CTF N L CE+CG S SG +S+Q S PL L+
Sbjct: 166 GGQDTAQS---LVSCPRCTFVNHPSLHECEICGASLSGLLETPNSNQHRAESPAPLIHLQ 222
>gi|386335464|ref|YP_006031634.1| transmembrane hypothetical [Ralstonia solanacearum Po82]
gi|334197914|gb|AEG71098.1| transmembrane hypothetical [Ralstonia solanacearum Po82]
Length = 569
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 23/220 (10%)
Query: 3 RGGGGWRVSRGMLPLLALHAFNEY-HRLPWKPPVTAALLATNTLIYLRPAFL-----DSL 56
RGG S + P A F E L +P T AL+A N L +L L +
Sbjct: 174 RGGSAGAQSMPVNPFKAERQFEEKLEALAPQPRFTYALIALNVLAWLVTLLLGGNPLQTP 233
Query: 57 VPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA 116
+ + + N +++ + R + F HA HL NM+ L GI +E G A
Sbjct: 234 ISVLFNLGGNAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVERIYGP---A 290
Query: 117 AMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNV 176
A ++ LG LL +L L F + A VG SG +F + Y +
Sbjct: 291 AYLLTYLGAG-----LLGSALSLSFAAQHA----IGVGASGAVFGVAGAWLVAIGRYRGL 341
Query: 177 HGLLVPARYAAWAELIIIQMFV-----PGVSFLGHLGGIL 211
+ R L ++ V PGV H+GG++
Sbjct: 342 MPQTLSKRLLTQLGLFVLYSLVQGLTKPGVDNAAHIGGLV 381
>gi|317106731|dbj|BAJ53227.1| JHL06P13.7 [Jatropha curcas]
Length = 311
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
RFF + HA HL NM+SLL+ GI LE EF + + LL + G L +L
Sbjct: 113 RFFSCIWLHAGVLHLLTNMISLLFIGIPLE-----QEFGFLRIGLLYVMSGFGGSLMSAL 167
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM- 196
+ +VG SG LF + + + SE + N + + A + L+II +
Sbjct: 168 --------SPEPNISVGASGALFGL--LGSMLSELFLNWTTYVNKCK-AVTSLLLIIGLN 216
Query: 197 ----FVPGVSFLGHLGGILAGIL 215
+P V H+GG L+G L
Sbjct: 217 LSFGLIPHVDNSAHIGGFLSGFL 239
>gi|334564482|ref|ZP_08517473.1| hypothetical protein CbovD2_07894 [Corynebacterium bovis DSM 20582]
Length = 198
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 26/147 (17%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA-AMVVALLGMSQGITLLLAKS 136
R S H +H+ NM+ + G LE S GS A M++ +G S G L+
Sbjct: 62 RLATSALVHLGVTHIVLNMLLIGLVGRDLERSYGSVVVAVGMLLTAVGGSVGSVLM---- 117
Query: 137 LVLFFDYERAYYSEYAVGFSGVLFAMKVVLN-SRSEDYTNVHGLLVPARYAAWAELIIIQ 195
D A +G+ +FAM V + SR ED L++ ++
Sbjct: 118 -----DPYTAMGGASTIGYG--MFAMLVARSASRREDLRGPVTLIIVN--------LVFT 162
Query: 196 MFVPGVSFLGHLGGILAG-----ILYL 217
+ PGVS GH+GG++ G +LYL
Sbjct: 163 LASPGVSLWGHIGGLVVGAVIGAVLYL 189
>gi|296448751|ref|ZP_06890606.1| Rhomboid family protein [Methylosinus trichosporium OB3b]
gi|296253741|gb|EFH00913.1| Rhomboid family protein [Methylosinus trichosporium OB3b]
Length = 234
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 38/208 (18%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSL---VPSIHEVWFNPHLILKYKDLKRFFLSP----- 83
+P V +L+ N +++ F DSL + I P ++ + +L R+ ++P
Sbjct: 16 RPIVNWSLIVINIAVFVA-VFSDSLGDPLTVIRGFGLIPAVLFGHAELARWIVTPGPDWT 74
Query: 84 -----FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLV 138
F+H+ HL NM+ L G +E MGS + + L G+S G
Sbjct: 75 VVTSLFFHSGFGHLAGNMIFLYVFGDNVEDGMGSLPY-LLFYLLCGVSAG---------- 123
Query: 139 LFFDYERAYYSEYAVGFSGVL---FAMKVVLNSRSEDYTNVHGLL---VPARYAAWAELI 192
L F Y VG SG + A ++L RS + V G++ PA I
Sbjct: 124 LLFAYGAPMTLHPLVGASGAISGVCAAFILLYPRSTIFGLVAGIIPIHAPASLFV-GTWI 182
Query: 193 IIQMFVP------GVSFLGHLGGILAGI 214
+ Q+F V + H+GGILAG+
Sbjct: 183 LFQLFNALTDEQGQVGWWAHVGGILAGL 210
>gi|328875515|gb|EGG23879.1| hypothetical protein DFA_06017 [Dictyostelium fasciculatum]
Length = 206
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYN 95
+ ++A N LI++ S + S+ FN I +Y RF S F H + HL N
Sbjct: 11 STIVIAINILIWVYQYETRSQLESVS---FNFEKITRYGQYWRFISSTFTHINLVHLALN 67
Query: 96 MMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGF 155
+S LW+ LE S+G ++ +L +S + ++ S+V +G+
Sbjct: 68 SIS-LWQLRFLEQSIGLYQYVKYSFFIL-LSSNLMMMFFISIVNIQRPTLNLKDRNYIGY 125
Query: 156 SGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHL 207
S V F + S Y+ +H + + + L+ Q+ P SF+GHL
Sbjct: 126 SCVCFGL-------STYYSLIH--FGFSNLSIFTSLLFTQILFPNASFIGHL 168
>gi|325972771|ref|YP_004248962.1| peptidase S54, rhomboid domain [Sphaerochaeta globus str. Buddy]
gi|324028009|gb|ADY14768.1| Peptidase S54, rhomboid domain [Sphaerochaeta globus str. Buddy]
Length = 212
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 41/203 (20%)
Query: 36 TAALLATNTLIYL-------RPAFLDSLVPSI---HEVWFNPHLILKYKDLKRFFLSPFY 85
T L+ N L+YL R A+ +++PS VW P F F
Sbjct: 20 TLKLVVLNALVYLLTAYIYPRSAYYLAMIPSFVLGGYVW-QP------------FTYMFV 66
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
H +HL +NM+SL G +E +GS EF + L G+ GI V F Y
Sbjct: 67 HGGFNHLLFNMLSLFIFGSMVEKRIGSKEF-LLFYLLAGLFSGI--------VSFISYYL 117
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGL-LVPARYAAWAELIII-----QMFVP 199
A + VG SG ++A+ +++ + Y+ + +P R L I Q+F
Sbjct: 118 AGTNVILVGASGAIYAV-LLMFAVFYPYSVIFVFGFIPVRAPILVILYAIIELSSQVFGR 176
Query: 200 G--VSFLGHLGGILAGILYLKLK 220
G V+ L HL G++ LY +++
Sbjct: 177 GGNVAHLTHLSGLVFAYLYCRIR 199
>gi|308175827|ref|YP_003915233.1| rhomboid family protein [Arthrobacter arilaitensis Re117]
gi|307743290|emb|CBT74262.1| rhomboid family protein [Arthrobacter arilaitensis Re117]
Length = 285
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRFFLSPFYHASES-- 90
P VT + N L+Y+ L ++P + + Y+ R S F H++ S
Sbjct: 76 PIVTYTFIGLNVLVYV----LQWVIPGLTNQLVLAPALAAYEPW-RLITSAFAHSTSSLL 130
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
HL NM + G LE MG F + +++ G S GI LLL+ L A
Sbjct: 131 HLAMNMYGVYIFGTMLEPRMGRLRFTWLYLLSAFGGSLGI-LLLSAPLSATLGASGA--- 186
Query: 150 EYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGG 209
+G+ A VV S + ++ +L A + + FV +S+ GHLGG
Sbjct: 187 -----LAGLFLATFVVFRSNKQALRSMGIIL--------ALNVALGFFVQSISWQGHLGG 233
Query: 210 ILAGIL 215
+ GIL
Sbjct: 234 AILGIL 239
>gi|207738893|ref|YP_002257286.1| membrane protein [Ralstonia solanacearum IPO1609]
gi|206592264|emb|CAQ59170.1| membrane protein [Ralstonia solanacearum IPO1609]
Length = 543
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 86/224 (38%), Gaps = 23/224 (10%)
Query: 3 RGGGGWRVSRGMLPLLALHAFNE-YHRLPWKPPVTAALLATNTLIYLRPAFL-----DSL 56
RGG S + P A F E L +P T AL+A N L +L L +
Sbjct: 148 RGGSAGAPSMPVNPFKAERQFEEKLEALAPQPRFTYALIALNVLAWLVTLLLGGNPLQTP 207
Query: 57 VPSIHEVWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFA 116
+ + + N +++ + R + F HA HL NM+ L GI +E G A
Sbjct: 208 ISVLFSLGGNAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVERIYGP---A 264
Query: 117 AMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNV 176
A ++ LG LL +L L F + A VG SG +F + Y +
Sbjct: 265 AYLLIYLGAG-----LLGSALSLSFAAQHA----IGVGASGAVFGVAGAWLVAIGRYRGL 315
Query: 177 HGLLVPARYAAWAELIIIQMFV-----PGVSFLGHLGGILAGIL 215
+ R L ++ PGV H+GG++ G +
Sbjct: 316 MPQTLSKRLLTQLGLFVLYSLAQGLTKPGVDNAAHIGGLVGGCM 359
>gi|323351912|gb|EGA84451.1| Rbd2p [Saccharomyces cerevisiae VL3]
Length = 196
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 21/181 (11%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHE-VWFNPHLILKYKDLKRFFLSPFYHASESH 91
PP A L T +++L +L S + ++ E + P + K + + R L P H S H
Sbjct: 13 PP---AALTTGLVVFLTAIYLLSFIFALREDLSLAPESLFKLQ-MSRLSLYPLIHLSLPH 68
Query: 92 LFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEY 151
L +N++++ W + L + + + L + GI L L+ Y E
Sbjct: 69 LLFNVLAI-WXPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLL---------YPEV 118
Query: 152 AV----GFSGVLFAMKVVLNSRSEDYTNVH--GLLVPARYAAWAELIIIQMFVPGVSFLG 205
V G+ LFA S+ T + +P Y L+ I + +PG SF G
Sbjct: 119 LVAGASGWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWG 178
Query: 206 H 206
H
Sbjct: 179 H 179
>gi|57241982|ref|ZP_00369922.1| uncharacterized membrane protein [Campylobacter upsaliensis RM3195]
gi|57017174|gb|EAL53955.1| uncharacterized membrane protein [Campylobacter upsaliensis RM3195]
Length = 178
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 28/187 (14%)
Query: 35 VTAALLATNTLIY-LRPAFLDSLVPSIHEVWFNPHLILKYKD-LKRFFLSPFYHASESHL 92
+T AL+ N LI+ L+ F D+ + +++F+ +L+ ++ L + S F H + +HL
Sbjct: 2 ITWALIILNGLIFILQTWFFDT---DLFDLYFSLNLLFVGENFLWQPLSSMFLHGNFTHL 58
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
NM+ L G LE+ MGS +F ALL G+ L + L F + +
Sbjct: 59 VLNMIVLFSFGRILESYMGSVKF-----ALLYFVGGLITSLLSAFYLLFAFAFWGQKIFL 113
Query: 153 VGFSGVLFAMKVVLNSRS-EDYTNVHGLLVPARYAAWAELIIIQMFVP-----GVSFLGH 206
VG SG A+ V++ + D T+ GL+V I++ F+P V++ GH
Sbjct: 114 VGASG---AICVLMGFYAFLDKTSTKGLVVA---------ILLMSFLPLFMGINVAWYGH 161
Query: 207 LGGILAG 213
+ G ++G
Sbjct: 162 IFGFISG 168
>gi|94312789|ref|YP_585998.1| intramembrane serine protease [Cupriavidus metallidurans CH34]
gi|93356641|gb|ABF10729.1| putative intramembrane serine protease [Cupriavidus metallidurans
CH34]
Length = 554
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 17/130 (13%)
Query: 38 ALLATNTLIYL----RPAFLDSLVPSIHEVWF-NPHLILKYKDLKRFFLSPFYHASESHL 92
+++A N LI+L R A LD P + W N + + R + F H S HL
Sbjct: 198 SMIAVNVLIWLIMLSRGAALDGAAPKMLIDWGGNLGALTQDGQWWRLLTATFLHGSLKHL 257
Query: 93 FYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYA 152
NM+ L G +E G+ F + V LL +L L+F A + +
Sbjct: 258 AANMVVLYLLGTHVERFFGTRSFLLIYVG--------AGLLGSALSLYF----AAQASVS 305
Query: 153 VGFSGVLFAM 162
VG SG +F +
Sbjct: 306 VGASGAVFGI 315
>gi|415721270|ref|ZP_11468477.1| rhomboid family membrane protein [Gardnerella vaginalis 00703Bmash]
gi|388061058|gb|EIK83727.1| rhomboid family membrane protein [Gardnerella vaginalis 00703Bmash]
Length = 233
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 27/202 (13%)
Query: 36 TAALLATNTLIYLRPAFLDSLVPSIHEVW-----FNPHLILKYKDLKRFFLSPFYHASE- 89
T +++ +++ L + +P ++++ F P LI K +F S F HA E
Sbjct: 21 TYSIIYICVFVWIIEMILHTFLPRAYQLFVENTAFAPFLITKAS--WTWFTSMFVHAPEL 78
Query: 90 SHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYS 149
+H+ +NM+ L G++LE G +F + A+ G+ + LL L D+ A Y
Sbjct: 79 THILFNMICLYSLGVELERFFGKWKFF-FLYAISGLGGCVATLLYSKLTQ--DWVIAAY- 134
Query: 150 EYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAELII-IQMFVPGVSFLGHL 207
G SG + + +L ++ +V+G L+ W L + + + V +++ H+
Sbjct: 135 ----GASGAIMGLIGALLVAQWRLGESVNGTLI------WIGLTLAMPLLVQNIAWQAHI 184
Query: 208 GGILAGILYLKLKGGYSGSDPL 229
GGI+ GI+ L G ++PL
Sbjct: 185 GGIVTGIVLSALLG---TNNPL 203
>gi|154486380|ref|ZP_02027787.1| hypothetical protein BIFADO_00192 [Bifidobacterium adolescentis
L2-32]
gi|154084243|gb|EDN83288.1| peptidase, S54 family [Bifidobacterium adolescentis L2-32]
Length = 262
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 92/240 (38%), Gaps = 44/240 (18%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKR---FFLSPFYHAS 88
P +T A++A +++ A L + P + N ++L ++ F S F H
Sbjct: 32 DPVITTAIMAICIVVWAIEAVLFLVWPEGGNAFVNAGMLLPATAVRHPWTFITSMFLHQP 91
Query: 89 ES--HLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYERA 146
S H+ +NM++L G LE MG + A+ V ++ A +
Sbjct: 92 TSLWHILFNMLTLWCVGPVLERMMGHWPYLALYVLSGLGGGAGLMVWAVC-------SPS 144
Query: 147 YYSEYAVGFSGVLFAM-KVVLNSRSEDYTNVHGLLVPARYAAWAEL-IIIQMFVPGVSFL 204
+ A G SG LF + +L ++ +L+ W + ++ + PG+++
Sbjct: 145 GWMTAAYGASGALFGLFAAILVVYRRIGIDIRSMLI------WMLINFLMPVITPGIAWQ 198
Query: 205 GHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGTVGG 264
H+GG + G GVL+W L + FR + R TV G
Sbjct: 199 AHVGGFIVG------------------------GVLAWLLVTGLHAFRGKSLTWRTTVYG 234
>gi|302669450|ref|YP_003829410.1| peptidase [Butyrivibrio proteoclasticus B316]
gi|302393923|gb|ADL32828.1| membrane-associated peptidase rhomboid family [Butyrivibrio
proteoclasticus B316]
Length = 216
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 21 HAFNEYHRLPWKPP-VTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLKRF 79
F E + +K VT AL+ N +I++ + + +I V + P +L+ + R
Sbjct: 10 QEFIEKQKKIYKSSYVTIALVIINAVIFVLGSMFFPFIYTI-GVMYTPS-VLQDGEYHRL 67
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVA 121
+ F H +HLF NMM LL G +E +G + M +A
Sbjct: 68 VTAMFLHQDINHLFNNMMILLLVGAIIENYLGHVAYGIMYMA 109
>gi|149723455|ref|XP_001489914.1| PREDICTED: nuclear protein localization protein 4 homolog [Equus
caballus]
Length = 615
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 254 PRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS 299
P ++ G +GGS T T +W C CTF N CEMC R+
Sbjct: 571 PGLHEYGAIGGS-THATTAAMWACQHCTFMNQPGTGHCEMCSLPRT 615
>gi|333992831|ref|YP_004525445.1| serine protease [Mycobacterium sp. JDM601]
gi|333488799|gb|AEF38191.1| serine protease [Mycobacterium sp. JDM601]
Length = 264
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 40/194 (20%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLIL-----KYKDLKRFFLSPFYH 86
P ++ L+A N L AF+ + S H+ + L+L L R S F H
Sbjct: 60 TPVISYGLIALNVL-----AFIGQM--SSHQ--LDSELVLWSPAVADGQLYRLLTSAFLH 110
Query: 87 ASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDYER 145
HL NM +L G LE +G + F+A+ +++ LG S + LL
Sbjct: 111 YGAMHLLLNMWALYVVGPPLEGLLGRSRFSALYLLSALGGSVTVYLL------------- 157
Query: 146 AYYSEYAVGFSGVLFAM---KVVLNSRSE-DYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
A + G SG +F + +++ R + D V ++V ++ +P +
Sbjct: 158 APLNTATAGASGAIFGLFGATLIVGRRLQMDIGWVAAIIVIN--------LVFTFTIPQI 209
Query: 202 SFLGHLGGILAGIL 215
S+ GH+GG++ G+L
Sbjct: 210 SWQGHVGGLVTGLL 223
>gi|256831415|ref|YP_003160142.1| rhomboid family protein [Jonesia denitrificans DSM 20603]
gi|256684946|gb|ACV07839.1| Rhomboid family protein [Jonesia denitrificans DSM 20603]
Length = 292
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 35/151 (23%)
Query: 78 RFFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLA 134
RF + H++ H+ +NM +L G QLE +G F + V++ +G + LL +
Sbjct: 120 RFVTAALLHSTTRYFHILFNMWALWVVGSQLELILGRARFITLYVLSAIGGHVAVVLLAS 179
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL--- 191
+++ +G SG +F + G LVP A+L
Sbjct: 180 P-------VNESWFIP-TLGASGAVFGL--------------FGALVPVMKRVGADLRGI 217
Query: 192 -------IIIQMFVPGVSFLGHLGGILAGIL 215
+++ VP +S+ GHLGG+L G++
Sbjct: 218 AVLIGINVVLGFIVPNISWQGHLGGLLTGVV 248
>gi|429205379|ref|ZP_19196656.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
gi|428146451|gb|EKW98690.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
Length = 224
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 28 RLPWKPPVTAALLATNTLIYLRPAF----LDSLVPSIHEVWFNPHLILKYKDLKRFFLSP 83
L +P VT L+ N ++++ F D V + F P L+ + R +
Sbjct: 16 NLVQRPLVTYILIGINLVVFMGTVFAGGSTDIRVLYMFGAKFTPALL--QGEWWRLIAAM 73
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H HLF NM++L + G ++E G +V+ LL L+ +
Sbjct: 74 FLHDGIGHLFINMITLYFIGPEIEDHYGHARM--LVIYLLSG-------------LYGNL 118
Query: 144 ERAYY--SEYAVGFSGVLFAM---KVVLNSRSEDYTNVHGLLVPAR-YAAWAELIIIQMF 197
A++ + AVG SG LF + ++L +S D + AR + + L ++ F
Sbjct: 119 LSAFWAPTTLAVGASGALFGLFGAYLILGHQSTDAQ----IQAQARQFLLFVILNVVLGF 174
Query: 198 VPGVSFLGHLGGILAGIL 215
GH+GG++AG L
Sbjct: 175 SGNTDLAGHVGGLIAGCL 192
>gi|284028038|ref|YP_003377969.1| Rhomboid family protein [Kribbella flavida DSM 17836]
gi|283807331|gb|ADB29170.1| Rhomboid family protein [Kribbella flavida DSM 17836]
Length = 246
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 57/141 (40%), Gaps = 26/141 (18%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKS 136
R F S F H H+F N+ L G LE +G F + ++ LG S + LL
Sbjct: 107 RLFTSAFTHLQIFHIFSNLFMLYQVGPLLEQMLGRLRFVLLYFLSALGGSIAVWLL---- 162
Query: 137 LVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELI 192
A +G SG + A+ V+ +R D T + A A
Sbjct: 163 ---------ANPVSSTLGASGAVLGLVGALLVISRARGMDVTWI--------LAYVAITA 205
Query: 193 IIQMFVPGVSFLGHLGGILAG 213
+I P +S+ GHLGG LAG
Sbjct: 206 VISFLFPNISWQGHLGGFLAG 226
>gi|344291384|ref|XP_003417415.1| PREDICTED: nuclear protein localization protein 4 homolog
[Loxodonta africana]
Length = 609
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 254 PRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS 299
P + G VGGS T+ +W C CTF N CEMC R+
Sbjct: 564 PGLQEFGAVGGSAHTATSAAMWACQHCTFMNPPGTGHCEMCSLPRT 609
>gi|224090695|ref|XP_002309063.1| predicted protein [Populus trichocarpa]
gi|222855039|gb|EEE92586.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + H HL NM+SLL GI+LE EF + V LL + G L +L
Sbjct: 109 RLITCNWLHGGVFHLLANMLSLLVIGIRLE-----QEFGFVKVGLLYVISGFGGSLLSAL 163
Query: 138 VLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM- 196
+ S +VG SG LF + + + SE TN + + AA+ L++I
Sbjct: 164 FI--------QSNISVGASGALFGL--LGSMLSELITN--WTIYANQVAAFITLVVIIAV 211
Query: 197 -----FVPGVSFLGHLGGILAGIL 215
+P V H+GG L+G L
Sbjct: 212 NLALGILPHVDNFAHIGGFLSGFL 235
>gi|445067421|gb|AGE14563.1| rhomboid [Triticum aestivum]
Length = 323
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 19/142 (13%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + HA HL NM+SL+ G++LE +F + V ++ + G+ + SL
Sbjct: 113 RLVTCIWLHAGVVHLLANMLSLVLVGLRLE-----QQFGFVRVGVIYLVSGVGGSVMSSL 167
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+ +VG SG LF AM L + YTN LV + L I
Sbjct: 168 FI--------RDNISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLFVIAVNLAI 219
Query: 194 IQMFVPGVSFLGHLGGILAGIL 215
+P V H+GG L G L
Sbjct: 220 --GILPHVDNFAHIGGFLTGFL 239
>gi|432333562|ref|ZP_19585328.1| rhomboid family protein [Rhodococcus wratislaviensis IFP 2016]
gi|430779509|gb|ELB94666.1| rhomboid family protein [Rhodococcus wratislaviensis IFP 2016]
Length = 249
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 75/194 (38%), Gaps = 37/194 (19%)
Query: 33 PPVTAALLATNTLIYL------RPAFLDSLVPSIHEVW--FNPHLILKYKDLKRFFLSPF 84
P VT L+A N I+L R + + W F P ++ + R S F
Sbjct: 25 PLVTYILMAVNVGIFLITAAQSRSIMQNQAGSKLFADWALFPPAVV--DGQIVRVLGSGF 82
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEFAAM-VVALLGMSQGITLLLAKSLVLFFDY 143
H HL NM +L G E +G +A + V+LLG S + L
Sbjct: 83 LHFGIIHLAVNMFALWVIGRDTELVLGRARYACVYFVSLLGGSAAVMLF----------- 131
Query: 144 ERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVP 199
G SG +F A V+L V ++ A +II + +P
Sbjct: 132 ---QLGAVTAGASGAVFGLMGAQAVILLRLRRSPAPVISVI--------AVNVIISITIP 180
Query: 200 GVSFLGHLGGILAG 213
G+S GHLGG++AG
Sbjct: 181 GISLWGHLGGLVAG 194
>gi|332668555|ref|YP_004451562.1| Rhomboid family protein [Cellulomonas fimi ATCC 484]
gi|332337592|gb|AEE44175.1| Rhomboid family protein [Cellulomonas fimi ATCC 484]
Length = 286
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 64 WFNPHLILKYKDLKRFFLSPFYHASES--HLFYNMMSLLWKGIQLETSMGSNEFAAM-VV 120
+F+P L+ + RF + F H+ S H+ NM++L G LE ++G F + +
Sbjct: 105 YFDPERGLE--EPWRFLTASFLHSPGSYVHIGVNMLALWMTGPFLEQALGRARFLTLYAL 162
Query: 121 ALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAM-KVVLNSRSEDYTNVHGL 179
+ G S + ++LA+ L + VG SG +F + VL +V G+
Sbjct: 163 SAFGGSVAV-VVLAEPL--------DAWDVGVVGASGAIFGLFGAVLVVMRRLGGDVRGI 213
Query: 180 LVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGI 214
LV A ++I G+++ HLGG+L G+
Sbjct: 214 LV-----VLALNVVIGFVFAGIAWQAHLGGLLTGV 243
>gi|121700128|ref|XP_001268329.1| rhomboid family protein, putative [Aspergillus clavatus NRRL 1]
gi|119396471|gb|EAW06903.1| rhomboid family protein, putative [Aspergillus clavatus NRRL 1]
Length = 272
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 8/186 (4%)
Query: 83 PFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLG-MSQGITLLLAKSLVLFF 141
PF H H F N+++L + E G+ A+ + L G+ +L+ K F
Sbjct: 72 PFIHTGFFHTFLNLLALTPLLERFEAEHGTLTAVALFIGPLSTFPAGLYILVEK-----F 126
Query: 142 DYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGV 201
R A + +L + + +S Y ++ +P ++ ++ +FVP
Sbjct: 127 ILHRNTAVVGASVWVFLLLGSEAIRTYKSNPYFSLGPYKIPTWTSSLFACALVSIFVPDT 186
Query: 202 SFLGHLGGILAGILYLKLKGGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGT 261
SFLGHL +L G YL G P I+R G L+ R Y+ + YGR
Sbjct: 187 SFLGHLCSVLIG--YLLGLGYLKVFVPPEKILRWIEGKLNLLGRLPHYVSVDQKTYGRYG 244
Query: 262 VGGSDT 267
V S T
Sbjct: 245 VLPSST 250
>gi|21232008|ref|NP_637925.1| hypothetical protein XCC2577 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767865|ref|YP_242627.1| hypothetical protein XC_1541 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990980|ref|YP_001902990.1| Rhomboid family membrane protein [Xanthomonas campestris pv.
campestris str. B100]
gi|384428551|ref|YP_005637911.1| integral membrane protein [Xanthomonas campestris pv. raphani 756C]
gi|21113745|gb|AAM41849.1| integral membrane protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573197|gb|AAY48607.1| integral membrane protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167732740|emb|CAP50934.1| Rhomboid family membrane protein [Xanthomonas campestris pv.
campestris]
gi|341937654|gb|AEL07793.1| integral membrane protein [Xanthomonas campestris pv. raphani 756C]
Length = 228
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 39/216 (18%)
Query: 29 LPWKPPVTAALLATNT-LIYLRPAFLD---SLVPSIHEVWFNPHLILKYKDLKRFFLSP- 83
LP PPVT ALL N + L+ A D L+PS + +P ++ + F SP
Sbjct: 2 LPQLPPVTKALLIANLGMFILQWALGDLGAGLLPS--DAALSPLMLWPLSNGFDAF-SPG 58
Query: 84 ------------FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITL 131
F H +HLF+NM++L G LE + G F + + + L
Sbjct: 59 ASFMPWQLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQL 118
Query: 132 LLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
L+A +F A + G G+L A ++ ++ V L P A +
Sbjct: 119 LMA-----WFTQSGAPVLGASGGVFGLLLAYGMLFPNQ-----RVMLLFPPIPMKARTFV 168
Query: 192 II---IQMFV------PGVSFLGHLGGILAGILYLK 218
I+ I++ + PGV+ HLGG+L G L ++
Sbjct: 169 IVFGAIELLLGATGWQPGVAHFAHLGGMLFGWLLIR 204
>gi|15893486|ref|NP_346835.1| hypothetical protein CA_C0193 [Clostridium acetobutylicum ATCC 824]
gi|337735404|ref|YP_004634851.1| hypothetical protein SMB_G0198 [Clostridium acetobutylicum DSM
1731]
gi|384456914|ref|YP_005669334.1| hypothetical protein CEA_G0198 [Clostridium acetobutylicum EA 2018]
gi|15023024|gb|AAK78175.1|AE007532_8 Uncharacterized conserved membrane protein, affecting LPS
biosynthesis [Clostridium acetobutylicum ATCC 824]
gi|325507603|gb|ADZ19239.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
gi|336292553|gb|AEI33687.1| hypothetical protein SMB_G0198 [Clostridium acetobutylicum DSM
1731]
Length = 667
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 221 GGYSGSDPLTTIIRGATGVLSWPLRFARYLFRRPRIYGRGTVGGSDTRRTAPIIW-RCPA 279
GG+SGSDP+ T+ + V + LR+A + + G +GGS TA + W R
Sbjct: 565 GGFSGSDPILTLKKFKQLVKNGSLRYAMITTNKGKATGFANLGGSSNSNTAIMNWIRKHG 624
Query: 280 CTFDNSGWLS 289
N W++
Sbjct: 625 KLVPNKEWMT 634
>gi|261416932|ref|YP_003250615.1| rhomboid family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385791745|ref|YP_005822868.1| rhomboid family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373388|gb|ACX76133.1| Rhomboid family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326940|gb|ADL26141.1| rhomboid family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 297
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 17/172 (9%)
Query: 75 DLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLA 134
+L R+ F H H F+NM+ L G ++ MGS F +M GI
Sbjct: 59 ELWRYVTYMFIHFDFMHFFFNMLMLWMFGSEVAEWMGSRHFVSMYFFC-----GIF---- 109
Query: 135 KSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY--AAWAELI 192
+L FF + +G SG L + V D + ++P R A W +
Sbjct: 110 AALFSFFMCILGLTNNPIIGASGALMGVFVAYYKFFPDRVILMFFVIPMRIKNAMWVMIA 169
Query: 193 IIQMFVPG---VSFLGHLGGILAGILYLKLKGGYSG---SDPLTTIIRGATG 238
+ +F ++ HLGG++AG LY+ + PL+ I R +G
Sbjct: 170 LDILFANSGDMIAHFAHLGGVVAGFLYMAIYQNGPKVLYHSPLSAIFRLFSG 221
>gi|345885386|ref|ZP_08836763.1| hypothetical protein HMPREF0666_02939 [Prevotella sp. C561]
gi|345045310|gb|EGW49242.1| hypothetical protein HMPREF0666_02939 [Prevotella sp. C561]
Length = 318
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 33 PPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKYKDLK--RFFLSPFYHASES 90
P +T LL N L+++ L L + + H IL D + +F F H +
Sbjct: 5 PVITKNLLIINVLVFVATYALRGLNIDL-DTLLGLHFILA-PDFRAWQFVTYMFMHGGVT 62
Query: 91 HLFYNMMSLLWKGIQLETSMGSNEFA--AMVVAL----------------LGMSQGITLL 132
HL NM L G+ +E G +F MV L G++Q TL
Sbjct: 63 HLLMNMFMLWMFGMVVENVWGPKKFLFYYMVCGLGAGVCQELAQYGTYVVEGLAQYETLR 122
Query: 133 LAKSLVLFFDYERAYYSEYAVG-FSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAEL 191
+A S++ +Y + A G GVL A ++ E+ + + VP + A W +
Sbjct: 123 IANSIIPMSEYLNMMNTVGASGAIYGVLLAFGMLF---PEERMFIIPIPVPIK-AKWIVI 178
Query: 192 --IIIQMFV------PGVSFLGHLGGILAGILYLK 218
+++++F GV+ L HLGG+L G + ++
Sbjct: 179 GSVVVELFSAIGTSNDGVAHLAHLGGMLFGFILIR 213
>gi|296111906|ref|YP_003622288.1| small hydrophobic molecule transporter protein [Leuconostoc kimchii
IMSNU 11154]
gi|339490819|ref|YP_004705324.1| small hydrophobic molecule transporter protein [Leuconostoc sp. C2]
gi|295833438|gb|ADG41319.1| small hydrophobic molecule transporter protein, putative
[Leuconostoc kimchii IMSNU 11154]
gi|338852491|gb|AEJ30701.1| small hydrophobic molecule transporter protein, putative
[Leuconostoc sp. C2]
Length = 229
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 32 KPPVTAALLATNTLIYLRPAFL------DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
+ P+T ++L LI++ + D + + + P++ L + D R F
Sbjct: 11 QAPITVSILTLTVLIFILELVIGGGQTDDGQLLVVLGAKWGPYIKLHH-DYWRLVTPLFL 69
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
HA H+F NM++L + G +E+S GS +F + + G+ I L L +
Sbjct: 70 HAGFMHVFTNMLTLWFIGPLVESSFGSRKFLILYL-FSGVIGNIFSYLFAPLTVSVGASS 128
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
A + + +L+A++ + R V + V ++ G+ G
Sbjct: 129 ALFGLFG---GMILYAIQFKDDPRIRSQGTVMIMFVALN-------LVTGFATTGIDMWG 178
Query: 206 HLGGILAGILYLKLKGGY--SGSDPL 229
H+GG++ G+++ + G Y SG PL
Sbjct: 179 HIGGLVGGMIFTIIVGFYGRSGKYPL 204
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 23/136 (16%)
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
HA HL NM+ LL+ GI+LE EF + + L+ + G+ L +L +
Sbjct: 124 HAGVVHLLINMLCLLFIGIRLE-----QEFGFVRIGLVYLISGLGGSLMSALFI------ 172
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQM------FVP 199
S +VG SG LF + + + SE TN L + AA L+ + + +P
Sbjct: 173 --RSSISVGASGALFGL--IGSMLSELITNWS--LYANKVAALLTLVFVIVVNLALGILP 226
Query: 200 GVSFLGHLGGILAGIL 215
V H+GG+++G L
Sbjct: 227 RVDNFAHIGGLISGFL 242
>gi|116333635|ref|YP_795162.1| membrane-associated serine protease [Lactobacillus brevis ATCC 367]
gi|116098982|gb|ABJ64131.1| Membrane-associated serine protease [Lactobacillus brevis ATCC 367]
Length = 226
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H +H+F NM++L + G QLE + G F ++ + G+ +
Sbjct: 68 FLHIGFTHIFLNMVTLYFVGTQLEAAFGHARFL-IIFLVAGIGGNVA------------- 113
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPAR-YAAWAEL-IIIQMFVPGV 201
+ + + G S +F + E + + AR + A+ + I +F PG+
Sbjct: 114 SFCFLNSLSAGASTAIFGLFGAFMMLGESFWQNPIIRQLARTFLAFVVMNIAFDLFTPGI 173
Query: 202 SFLGHLGGILAGIL 215
GHLGG++AG L
Sbjct: 174 DLAGHLGGLIAGFL 187
>gi|431796163|ref|YP_007223067.1| hypothetical protein Echvi_0782 [Echinicola vietnamensis DSM 17526]
gi|430786928|gb|AGA77057.1| putative membrane protein [Echinicola vietnamensis DSM 17526]
Length = 306
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 80 FLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVL 139
F F H H+ +NM+ L W G+ ++ +GS + A + + L G++ + ++ ++
Sbjct: 74 FTYMFMHEGIFHILFNMLFLYWFGLLVQEYLGSRKLANLYI-LGGLAGAVLYVIMYNVAP 132
Query: 140 FFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLL---VPARYAAWAELIIIQM 196
+F +R + +G S ++A+ V + + D T H LL V +Y A ++I
Sbjct: 133 YFIEQRD--AALMLGASAGVYAIVVGAATLTPD-TTFHLLLLGPVKIKYIAIFYVVIAFA 189
Query: 197 FVPGVSF---LGHLGGILAGILYLK-LKGGYSGSDPLTTIIR 234
G + L HLGG G LY+ L+ G P+ + R
Sbjct: 190 NSTGANAGGELAHLGGAAIGYLYITMLRKGTDLGTPVQAVGR 231
>gi|383789325|ref|YP_005473899.1| hypothetical protein [Spirochaeta africana DSM 8902]
gi|383105859|gb|AFG36192.1| putative membrane protein [Spirochaeta africana DSM 8902]
Length = 232
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 27 HRLPWKP-PVTAALLATNTLIYLRPAFLDSLVPSIHEVW-FNPHLILKYKDLKRFFLSPF 84
H P++ V ++A N L + F +L P + + + NP+L + + + F F
Sbjct: 31 HPFPYRQWNVVTGIIAINLLAF----FFTTLSPRLLQYFAMNPYLTIYQRMYWQPFTYMF 86
Query: 85 YHASESHLFYNMMSLLWKGIQLETSMGSNEF 115
H + +H+ +NM+ L G LE ++GS EF
Sbjct: 87 LHGTVTHILFNMLILFVFGQYLERALGSIEF 117
>gi|357165337|ref|XP_003580349.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 343
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 31/156 (19%)
Query: 70 ILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGI 129
+++ + R S + HA HL NM+SL++ G++LE +F V L+ + G+
Sbjct: 129 VVRGNEAWRLETSTWLHAGLIHLGANMISLIFVGVRLE-----QQFGFWKVGLVYLVSGL 183
Query: 130 TLLLAKSLVLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARY 185
+ VLF + +VG SG LF AM L + YTN R
Sbjct: 184 GGSILS--VLFIR------NGVSVGASGALFGLLGAMLSELITNWSIYTN--------RI 227
Query: 186 AAWAELIIIQM------FVPGVSFLGHLGGILAGIL 215
AA A LIII +P V H+GG G L
Sbjct: 228 AAMANLIIIAAINLALGILPHVDNFAHIGGFATGFL 263
>gi|291520209|emb|CBK75430.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Butyrivibrio fibrisolvens 16/4]
Length = 191
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 10/151 (6%)
Query: 66 NPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGM 125
NP+L+L + R F + F H +HL NM+ L G E ++G + LG+
Sbjct: 17 NPYLVLYGHEWYRLFTATFMHFGINHLANNMLLLFLLGQMFERAVGPTRY-------LGI 69
Query: 126 SQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARY 185
G LA S + FF ++ G SG +F + + + + R
Sbjct: 70 YLGSG--LAGSFLSFFYMCLVGKNDIVAGASGAIFGIVGGMVVVVIVNKGRYKGISVRRM 127
Query: 186 AAWAELIIIQMF-VPGVSFLGHLGGILAGIL 215
A L + F G +GHLGG++AGI+
Sbjct: 128 VFMALLTLYFGFATAGTDNVGHLGGLMAGII 158
>gi|419780012|ref|ZP_14305863.1| peptidase, S54 family [Streptococcus oralis SK100]
gi|383185642|gb|EIC78137.1| peptidase, S54 family [Streptococcus oralis SK100]
Length = 226
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 24/189 (12%)
Query: 34 PVTAALLATNTLIYLRPAFL--------DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
PVT+ L L++L L D+L+ + P + L + + R F + F
Sbjct: 10 PVTSFFLLVTALVFLLMLVLTGLNFERADTLLQ--FGAMYGPIIRLFPEQIWRLFSAIFV 67
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
H H NM+SL + G Q+E GS +F + + L GM + + VL
Sbjct: 68 HIGWEHFIVNMISLYFLGRQVEEIFGSKQFFFLYL-LSGMMGNLFVFAFTPKVLAAGAST 126
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSED-YTNVHGLLVPARYAAWAELIIIQMFVPGVSFL 204
+ Y LFA +VL + + Y G + + II + +PG+S
Sbjct: 127 SLYG---------LFAAIIVLRYATRNPYIQQLG---QSYLTLFVINIIGSVLIPGISLA 174
Query: 205 GHLGGILAG 213
GH+GG + G
Sbjct: 175 GHIGGAVGG 183
>gi|125532680|gb|EAY79245.1| hypothetical protein OsI_34361 [Oryza sativa Indica Group]
Length = 332
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 29/147 (19%)
Query: 78 RFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSL 137
R + HA HL NM+SL+ G++LE +F M + ++ + GI + SL
Sbjct: 122 RLVTCIWLHAGVVHLLANMLSLVLIGLRLE-----QQFGYMRIGIIYLVSGIGGSVLSSL 176
Query: 138 VLFFDYERAYYSEYAVGFSGVLF----AMKVVLNSRSEDYTNVHGLLVPARYAAWAELII 193
+ + +VG SG LF AM L + YTN LV LI+
Sbjct: 177 FI--------RNSISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTL-------LIV 221
Query: 194 IQM-----FVPGVSFLGHLGGILAGIL 215
I + +P V H+GG L G L
Sbjct: 222 IAINLAIGILPHVDNFAHIGGFLTGFL 248
>gi|441518028|ref|ZP_20999756.1| hypothetical protein GOHSU_24_00060 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455057|dbj|GAC57717.1| hypothetical protein GOHSU_24_00060 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 244
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 1 MERGGGGWRVSRGMLPLLALHAFNEYHRLPWKPPVTAALLATNTLIY---LRPAFLDSLV 57
M R G RV G P +A H P VT L+A N +++ + + ++
Sbjct: 1 MARESAGARV--GTAPQVAEHTNR-------APVVTYGLIAVNLVLFAAAMAQSVGNAKA 51
Query: 58 PSIHE---VWFNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLETSMGSNE 114
SI ++ N HL+ +Y R S F H+S HL NM+SL G +LE G
Sbjct: 52 SSIMNDGALYSNRHLVFEYW---RLLTSGFLHSSVPHLALNMISLYIVGRELERLFGPAR 108
Query: 115 FAAMVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAVGFSGVLFAMKVVLNSRSEDYT 174
+ + + L+ + G + VL F A + G++ A+ VV+ T
Sbjct: 109 Y--LTIYLMSLFGG------SAAVLLFQQGPAPTVGASGAIYGLMGALLVVVLRLKLPAT 160
Query: 175 NVHGLLVPARYAAWAELIIIQMFVPGVSFLGHLGGILAGIL 215
+V L+V I++ + +PG+S HLGG+ G L
Sbjct: 161 SV--LVVIGLN------IVMSISIPGISLWAHLGGLAFGAL 193
>gi|325000791|ref|ZP_08121903.1| serine peptidase [Pseudonocardia sp. P1]
Length = 254
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 29/191 (15%)
Query: 32 KPPVTAALLATNTLIYLRPAFLDSLVPSIHEVWFNPHLILKY--------KDLKRFFLSP 83
KP + AL+A N +++ S++ + +P L L R +
Sbjct: 41 KPVIVPALIAVNVAVFVLTVVTAG---SLNRNFDSPLFGLGALTPVDVADGQLWRLVTAG 97
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMV-VALLGMSQGITLLLAKSLVLFFD 142
F H HL +NM +L G ++E +G F A+ V+LLG S + +LL+ L
Sbjct: 98 FLHIGPLHLAFNMFALWVIGREVEAVLGRARFTAVYGVSLLGGSAAV-MLLSNPL----- 151
Query: 143 YERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVS 202
A S G G LF + L + V + V +I + G+S
Sbjct: 152 GPTAGASGAVFGLMGALFVLLRRLRLPAGQVIGVIAINV-----------VISFTLQGIS 200
Query: 203 FLGHLGGILAG 213
+ GHLGG++ G
Sbjct: 201 WQGHLGGLVFG 211
>gi|225849971|ref|YP_002730205.1| rhomboid family protein [Persephonella marina EX-H1]
gi|225646578|gb|ACO04764.1| rhomboid family protein [Persephonella marina EX-H1]
Length = 224
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 32 KPPV-TAALLATNTLIYLRPAFLDSL--VPSIHEVWFNPHLILKYKDLKRFFLSPFYHAS 88
KPPV T + + N LI+ L L + IH+ P I+ Y + ++ S F H S
Sbjct: 12 KPPVLTVSFILINVLIFFYEVSLPELELIRFIHQFGLLPVDII-YLNWEKILTSMFLHGS 70
Query: 89 ESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGIT 130
+HLF NM+ L G +E ++G +F + L G+ +T
Sbjct: 71 FAHLFGNMLFLWIFGNNVEDALGRFKFVIFYI-LSGVGAAVT 111
>gi|441498231|ref|ZP_20980431.1| Rhomboid family protein [Fulvivirga imtechensis AK7]
gi|441438019|gb|ELR71363.1| Rhomboid family protein [Fulvivirga imtechensis AK7]
Length = 206
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 65 FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLET-------SMGSNEFAA 117
FNP+ + KYK RF S F H HL +NM+ L G Q+E + G+ F A
Sbjct: 30 FNPYSVNKYKQYYRFVTSGFIHNDFIHLLFNMLVLWMFGEQVEYVFTALYGTTGTVLFVA 89
Query: 118 MVVALLGMSQGITLLLAKSLVLFFDYERAYYSEYAV--GFSGVLFA 161
+ + + +S T L K + AYY+ G S VLF+
Sbjct: 90 LYILGIIVSDIPTYLKHK--------DHAYYNALGASGGVSSVLFS 127
>gi|426239181|ref|XP_004013504.1| PREDICTED: nuclear protein localization protein 4 homolog [Ovis
aries]
Length = 614
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 254 PRIYGRGTVGGSDTRRTAPIIWRCPACTFDNSGWLSICEMCGTSRS 299
P + G VGGS T T+ +W C CTF N CEMC R+
Sbjct: 570 PGLQEYGAVGGS-THATSSAMWACQHCTFMNQPGTGHCEMCSLPRT 614
>gi|406577415|ref|ZP_11053025.1| peptidase, S54 (rhomboid) family protein [Streptococcus sp. GMD6S]
gi|406586912|ref|ZP_11061831.1| peptidase, S54 (rhomboid) family protein [Streptococcus sp. GMD1S]
gi|419814082|ref|ZP_14338885.1| peptidase, S54 (rhomboid) family protein [Streptococcus sp. GMD2S]
gi|419817140|ref|ZP_14341309.1| peptidase, S54 (rhomboid) family protein [Streptococcus sp. GMD4S]
gi|404459967|gb|EKA06267.1| peptidase, S54 (rhomboid) family protein [Streptococcus sp. GMD6S]
gi|404466392|gb|EKA11732.1| peptidase, S54 (rhomboid) family protein [Streptococcus sp. GMD4S]
gi|404472252|gb|EKA16685.1| peptidase, S54 (rhomboid) family protein [Streptococcus sp. GMD2S]
gi|404473602|gb|EKA17934.1| peptidase, S54 (rhomboid) family protein [Streptococcus sp. GMD1S]
Length = 226
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 34 PVTAALLATNTLIYLRPAFL--------DSLVPSIHEVWFNPHLILKYKDLKRFFLSPFY 85
PVT+ L L++L L D+L+ + P + L + + R F + F
Sbjct: 10 PVTSFFLLVTALVFLLMLVLTGLNFERADTLLQ--FGAMYGPIIRLFPEQIWRLFSAIFV 67
Query: 86 HASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDYER 145
H H NM+SL + G Q+E GS +F LL + G + +L +F +
Sbjct: 68 HIGWEHFIVNMISLYFLGRQVEEIFGSKQF-----FLLYLLSG----MMGNLFVFAFTPK 118
Query: 146 AYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELIIIQMFVPGVSFLG 205
+ + G+ A+ V+ + Y G + + II + +PG+S G
Sbjct: 119 VVAAGASTSLYGLFAAIIVLRYATRNPYIQQLG---QSYLTLFVINIIGSVLIPGISLAG 175
Query: 206 HLGGILAG 213
H+GG + G
Sbjct: 176 HIGGAVGG 183
>gi|390945303|ref|YP_006409064.1| hypothetical protein Belba_3827 [Belliella baltica DSM 15883]
gi|390418731|gb|AFL86309.1| putative membrane protein [Belliella baltica DSM 15883]
Length = 210
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 58 PSIHEVW-FNPHLILKYKDLKRFFLSPFYHASESHLFYNMMSLLWKGIQLE 107
PSI + W F P+LI RF LS F H HL +NM + + G +E
Sbjct: 25 PSILDRWMFTPYLIKNKNQYDRFVLSGFIHKDSMHLLFNMFTFYFFGGAVE 75
>gi|389759371|ref|ZP_10191765.1| hypothetical protein UU5_18447 [Rhodanobacter sp. 115]
gi|388430478|gb|EIL87642.1| hypothetical protein UU5_18447 [Rhodanobacter sp. 115]
Length = 221
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 84 FYHASESHLFYNMMSLLWKGIQLETSMGSNEFAAMVVALLGMSQGITLLLAKSLVLFFDY 143
F H +H+ +NM +L G +E + G+ F I LA+ LV+ + +
Sbjct: 71 FMHGGFTHILFNMFALYMFGGAIEQTFGARHFVIYYFVC-----AIVAALAQLLVVKY-F 124
Query: 144 ERAYYSEYAVGFSGVLFAMKVVLNSRSEDYTNVHGLLVPARYAAWAELI---IIQMFV-- 198
+Y +G SG +F + + V L +P AW +I +++F+
Sbjct: 125 THGFYPT--IGASGAIFGLLLAFGMLYPQ-EKVMLLFLPVPMPAWLFVIGYAAVELFMGV 181
Query: 199 ----PGVSFLGHLGGILAGILYLK 218
GV+ HLGG++ GI+ ++
Sbjct: 182 TGTEAGVAHFAHLGGMVGGIVLIQ 205
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.141 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,392,378,868
Number of Sequences: 23463169
Number of extensions: 227625983
Number of successful extensions: 641936
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 1805
Number of HSP's that attempted gapping in prelim test: 639452
Number of HSP's gapped (non-prelim): 2397
length of query: 328
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 186
effective length of database: 9,027,425,369
effective search space: 1679101118634
effective search space used: 1679101118634
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)