Query 020301
Match_columns 328
No_of_seqs 258 out of 2083
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 14:49:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020301.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020301hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 2.5E-70 8.5E-75 521.5 35.2 292 12-326 25-317 (345)
2 3kb6_A D-lactate dehydrogenase 100.0 1.1E-69 3.8E-74 515.9 26.1 282 16-326 1-300 (334)
3 4e5n_A Thermostable phosphite 100.0 1.3E-67 4.5E-72 501.1 31.5 290 14-326 1-298 (330)
4 3k5p_A D-3-phosphoglycerate de 100.0 4E-67 1.4E-71 508.6 32.8 288 10-326 10-303 (416)
5 4dgs_A Dehydrogenase; structur 100.0 1.7E-67 5.8E-72 501.1 26.1 285 13-326 28-312 (340)
6 1sc6_A PGDH, D-3-phosphoglycer 100.0 2.7E-66 9.2E-71 503.8 32.4 286 12-326 1-292 (404)
7 3hg7_A D-isomer specific 2-hyd 100.0 3.1E-66 1.1E-70 489.5 26.7 280 14-326 4-285 (324)
8 2yq5_A D-isomer specific 2-hyd 100.0 4E-66 1.4E-70 492.2 26.6 286 15-326 1-304 (343)
9 3jtm_A Formate dehydrogenase, 100.0 2.6E-65 9E-70 488.2 28.9 289 16-326 20-311 (351)
10 3gg9_A D-3-phosphoglycerate de 100.0 8.3E-65 2.8E-69 485.1 30.6 288 15-326 2-306 (352)
11 3evt_A Phosphoglycerate dehydr 100.0 1.4E-65 4.8E-70 485.5 24.9 279 15-326 1-282 (324)
12 2pi1_A D-lactate dehydrogenase 100.0 4.8E-65 1.7E-69 484.0 23.1 283 16-326 1-300 (334)
13 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 4.4E-63 1.5E-67 470.5 32.2 286 13-326 24-309 (335)
14 4hy3_A Phosphoglycerate oxidor 100.0 8.5E-64 2.9E-68 479.3 24.3 285 14-326 26-320 (365)
15 1xdw_A NAD+-dependent (R)-2-hy 100.0 5.5E-63 1.9E-67 469.8 29.2 285 16-326 1-303 (331)
16 1gdh_A D-glycerate dehydrogena 100.0 4.9E-62 1.7E-66 461.3 35.4 289 16-326 2-292 (320)
17 2cuk_A Glycerate dehydrogenase 100.0 2.7E-62 9.3E-67 461.2 33.4 282 16-326 1-283 (311)
18 1dxy_A D-2-hydroxyisocaproate 100.0 3.6E-63 1.2E-67 471.3 26.6 284 16-326 1-301 (333)
19 1wwk_A Phosphoglycerate dehydr 100.0 3.5E-62 1.2E-66 459.9 31.2 285 14-326 2-287 (307)
20 1j4a_A D-LDH, D-lactate dehydr 100.0 1.5E-62 5E-67 467.3 28.8 285 16-326 2-303 (333)
21 2ekl_A D-3-phosphoglycerate de 100.0 5.8E-62 2E-66 459.5 32.1 283 14-326 4-289 (313)
22 3pp8_A Glyoxylate/hydroxypyruv 100.0 1.5E-62 5E-67 463.3 26.8 275 14-326 2-284 (315)
23 2nac_A NAD-dependent formate d 100.0 3.1E-62 1.1E-66 472.6 27.1 277 29-326 59-338 (393)
24 2j6i_A Formate dehydrogenase; 100.0 2.4E-62 8.2E-67 470.6 23.3 291 14-326 16-317 (364)
25 3ba1_A HPPR, hydroxyphenylpyru 100.0 7E-60 2.4E-64 448.3 31.2 282 15-326 23-305 (333)
26 2gcg_A Glyoxylate reductase/hy 100.0 7.8E-59 2.7E-63 441.3 34.3 294 12-326 5-301 (330)
27 1mx3_A CTBP1, C-terminal bindi 100.0 1.4E-59 4.7E-64 448.5 27.1 290 12-326 18-315 (347)
28 2dbq_A Glyoxylate reductase; D 100.0 2E-58 6.7E-63 439.1 31.6 289 15-326 2-294 (334)
29 2d0i_A Dehydrogenase; structur 100.0 1.5E-58 5.3E-63 439.6 29.5 284 15-326 2-290 (333)
30 3oet_A Erythronate-4-phosphate 100.0 4.1E-59 1.4E-63 447.8 25.0 258 14-326 2-263 (381)
31 2w2k_A D-mandelate dehydrogena 100.0 2.7E-58 9.2E-63 440.4 25.9 290 15-326 3-310 (348)
32 1qp8_A Formate dehydrogenase; 100.0 2.1E-58 7.2E-63 433.2 22.3 262 16-324 1-264 (303)
33 1ygy_A PGDH, D-3-phosphoglycer 100.0 1.5E-56 5.2E-61 449.8 31.5 284 14-326 3-286 (529)
34 3gvx_A Glycerate dehydrogenase 100.0 5.4E-57 1.8E-61 420.4 24.9 228 62-326 34-262 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 7E-56 2.4E-60 426.2 23.4 256 16-326 1-260 (380)
36 3d64_A Adenosylhomocysteinase; 100.0 1.8E-35 6.1E-40 292.1 3.1 197 87-325 214-416 (494)
37 1v8b_A Adenosylhomocysteinase; 100.0 3.3E-35 1.1E-39 289.2 4.4 200 86-325 193-399 (479)
38 3d4o_A Dipicolinate synthase s 100.0 6.2E-30 2.1E-34 238.6 14.7 215 14-276 4-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 1.4E-26 4.6E-31 216.6 15.3 221 14-276 6-250 (300)
40 2vhw_A Alanine dehydrogenase; 99.9 1.4E-23 4.7E-28 202.3 17.4 251 29-325 22-305 (377)
41 3ce6_A Adenosylhomocysteinase; 99.9 3E-25 1E-29 219.7 4.0 200 88-325 212-420 (494)
42 1gtm_A Glutamate dehydrogenase 99.8 8.1E-22 2.8E-26 191.7 -2.0 131 160-321 206-341 (419)
43 3h9u_A Adenosylhomocysteinase; 99.8 5.7E-19 1.9E-23 171.2 14.3 156 93-285 155-312 (436)
44 1x13_A NAD(P) transhydrogenase 99.8 1.5E-18 5.1E-23 168.4 13.6 230 29-279 29-301 (401)
45 2eez_A Alanine dehydrogenase; 99.8 5.2E-18 1.8E-22 162.8 16.5 255 29-324 22-309 (369)
46 3n58_A Adenosylhomocysteinase; 99.8 2.8E-18 9.5E-23 166.3 13.8 155 93-284 191-347 (464)
47 1l7d_A Nicotinamide nucleotide 99.7 3.3E-17 1.1E-21 158.0 16.4 240 29-278 22-302 (384)
48 3gvp_A Adenosylhomocysteinase 99.7 8.2E-17 2.8E-21 155.8 12.8 154 93-283 164-319 (435)
49 1gpj_A Glutamyl-tRNA reductase 99.6 3.1E-17 1.1E-21 159.3 -0.3 192 88-325 83-293 (404)
50 1c1d_A L-phenylalanine dehydro 99.4 1.2E-12 4E-17 124.5 11.7 108 162-292 172-280 (355)
51 3p2y_A Alanine dehydrogenase/p 99.4 3.9E-11 1.3E-15 114.9 21.5 255 11-278 18-310 (381)
52 3doj_A AT3G25530, dehydrogenas 99.3 1.4E-12 4.8E-17 121.9 8.1 118 159-291 15-134 (310)
53 3qsg_A NAD-binding phosphogluc 99.3 1.9E-11 6.3E-16 114.4 12.6 145 142-303 2-150 (312)
54 3l6d_A Putative oxidoreductase 99.3 5.7E-12 2E-16 117.5 8.4 116 161-291 5-120 (306)
55 3obb_A Probable 3-hydroxyisobu 99.3 5.8E-12 2E-16 117.4 7.2 115 166-297 4-120 (300)
56 4gbj_A 6-phosphogluconate dehy 99.2 1.1E-11 3.6E-16 115.5 8.2 115 166-297 6-120 (297)
57 4dll_A 2-hydroxy-3-oxopropiona 99.2 1.2E-11 4.1E-16 116.1 8.5 116 162-292 28-144 (320)
58 2d5c_A AROE, shikimate 5-dehyd 99.2 3.1E-11 1.1E-15 110.1 10.0 197 30-290 21-222 (263)
59 2g5c_A Prephenate dehydrogenas 99.2 8.1E-11 2.8E-15 107.9 12.8 142 166-324 2-150 (281)
60 4e21_A 6-phosphogluconate dehy 99.2 4.7E-11 1.6E-15 114.0 10.4 122 163-301 20-144 (358)
61 3ond_A Adenosylhomocysteinase; 99.2 1.2E-10 4.1E-15 114.6 12.6 158 88-282 203-363 (488)
62 3pef_A 6-phosphogluconate dehy 99.2 2.6E-11 9E-16 111.7 7.4 111 166-291 2-114 (287)
63 3qha_A Putative oxidoreductase 99.2 2.3E-11 7.9E-16 112.9 6.3 111 165-292 15-125 (296)
64 3ggo_A Prephenate dehydrogenas 99.2 1.4E-10 4.9E-15 108.6 11.3 144 162-322 30-180 (314)
65 4dio_A NAD(P) transhydrogenase 99.1 1.4E-10 4.7E-15 111.9 10.8 238 29-279 47-321 (405)
66 4ezb_A Uncharacterized conserv 99.1 2.6E-10 9E-15 106.9 11.9 125 165-303 24-152 (317)
67 3pdu_A 3-hydroxyisobutyrate de 99.1 2.6E-11 8.9E-16 111.8 4.9 111 166-291 2-114 (287)
68 4e12_A Diketoreductase; oxidor 99.1 4.8E-10 1.7E-14 103.2 13.4 145 166-322 5-161 (283)
69 3g0o_A 3-hydroxyisobutyrate de 99.1 3.7E-11 1.3E-15 111.7 5.6 112 165-291 7-121 (303)
70 2h78_A Hibadh, 3-hydroxyisobut 99.1 8.4E-11 2.9E-15 109.0 7.8 111 166-291 4-116 (302)
71 4gwg_A 6-phosphogluconate dehy 99.1 2.6E-10 8.9E-15 112.7 11.5 125 165-300 4-131 (484)
72 2pv7_A T-protein [includes: ch 99.1 1.8E-10 6.2E-15 106.9 9.7 119 165-321 21-142 (298)
73 3dtt_A NADP oxidoreductase; st 99.1 6.9E-11 2.4E-15 106.7 6.6 108 149-272 3-124 (245)
74 2hk9_A Shikimate dehydrogenase 99.1 2.8E-10 9.6E-15 104.5 9.3 184 31-273 33-222 (275)
75 3b1f_A Putative prephenate deh 99.0 1E-09 3.6E-14 100.9 11.9 144 165-324 6-158 (290)
76 1leh_A Leucine dehydrogenase; 99.0 1.4E-09 4.7E-14 103.9 10.6 108 162-291 170-278 (364)
77 3cky_A 2-hydroxymethyl glutara 99.0 6.3E-10 2.2E-14 102.7 7.6 109 166-289 5-115 (301)
78 1vpd_A Tartronate semialdehyde 99.0 6.9E-10 2.4E-14 102.3 7.6 109 166-289 6-116 (299)
79 3ktd_A Prephenate dehydrogenas 99.0 4.3E-10 1.5E-14 106.5 6.2 138 166-322 9-154 (341)
80 2zyd_A 6-phosphogluconate dehy 99.0 1.7E-09 5.7E-14 107.0 9.9 118 162-291 12-132 (480)
81 2gf2_A Hibadh, 3-hydroxyisobut 98.9 8.4E-10 2.9E-14 101.6 6.8 107 167-288 2-110 (296)
82 1yb4_A Tartronic semialdehyde 98.9 7.5E-10 2.6E-14 101.8 5.3 107 166-288 4-112 (295)
83 2uyy_A N-PAC protein; long-cha 98.9 2.6E-09 8.8E-14 99.5 8.0 109 166-289 31-141 (316)
84 2cvz_A Dehydrogenase, 3-hydrox 98.9 2E-09 6.7E-14 98.6 6.8 106 166-289 2-107 (289)
85 1np3_A Ketol-acid reductoisome 98.9 2.5E-09 8.5E-14 101.1 7.7 136 161-322 12-155 (338)
86 2yjz_A Metalloreductase steap4 98.4 2.3E-10 7.9E-15 100.5 0.0 93 163-276 17-109 (201)
87 2p4q_A 6-phosphogluconate dehy 98.9 4.4E-09 1.5E-13 104.4 9.1 116 165-291 10-128 (497)
88 3k6j_A Protein F01G10.3, confi 98.8 3E-08 1E-12 97.3 13.6 166 115-300 11-191 (460)
89 2iz1_A 6-phosphogluconate dehy 98.8 7E-09 2.4E-13 102.4 9.0 115 166-292 6-123 (474)
90 3oj0_A Glutr, glutamyl-tRNA re 98.8 2.2E-08 7.5E-13 82.5 10.3 105 165-287 21-132 (144)
91 3fr7_A Putative ketol-acid red 98.8 2.5E-09 8.4E-14 104.7 5.1 103 160-275 48-157 (525)
92 2dpo_A L-gulonate 3-dehydrogen 98.8 3.5E-08 1.2E-12 92.5 12.8 132 165-300 6-148 (319)
93 2f1k_A Prephenate dehydrogenas 98.8 2.9E-08 1E-12 90.5 11.8 137 167-322 2-142 (279)
94 2pgd_A 6-phosphogluconate dehy 98.8 8.2E-09 2.8E-13 102.1 8.3 116 166-292 3-121 (482)
95 1i36_A Conserved hypothetical 98.8 1.3E-08 4.5E-13 92.1 8.7 102 167-288 2-104 (264)
96 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.8 2.9E-08 9.9E-13 98.1 11.5 118 167-292 3-123 (478)
97 1zej_A HBD-9, 3-hydroxyacyl-CO 98.8 2E-08 6.8E-13 93.2 9.4 136 162-320 9-145 (293)
98 2q3e_A UDP-glucose 6-dehydroge 98.7 2.6E-08 8.9E-13 98.1 10.2 147 166-317 6-181 (467)
99 3d1l_A Putative NADP oxidoredu 98.7 2E-08 6.7E-13 91.1 7.5 102 161-278 6-108 (266)
100 1pjc_A Protein (L-alanine dehy 98.7 2.7E-07 9.3E-12 87.8 14.8 225 29-273 22-268 (361)
101 2i99_A MU-crystallin homolog; 98.7 9.6E-08 3.3E-12 89.2 10.7 96 164-276 134-230 (312)
102 2raf_A Putative dinucleotide-b 98.7 3.3E-08 1.1E-12 87.0 6.9 80 161-276 15-94 (209)
103 3p2o_A Bifunctional protein fo 98.6 9.2E-07 3.1E-11 81.2 16.6 170 32-275 57-235 (285)
104 2ahr_A Putative pyrroline carb 98.6 2.8E-07 9.6E-12 83.1 13.0 102 166-289 4-105 (259)
105 2vns_A Metalloreductase steap3 98.6 6.3E-08 2.1E-12 85.5 7.6 95 164-278 27-121 (215)
106 3gt0_A Pyrroline-5-carboxylate 98.6 1.2E-07 4E-12 85.3 8.9 105 166-288 3-111 (247)
107 4a26_A Putative C-1-tetrahydro 98.6 1.1E-06 3.8E-11 81.1 15.2 170 32-274 61-241 (300)
108 3c24_A Putative oxidoreductase 98.6 9.8E-08 3.4E-12 87.6 7.7 92 166-275 12-104 (286)
109 2izz_A Pyrroline-5-carboxylate 98.5 4.1E-07 1.4E-11 85.1 11.2 108 163-288 20-132 (322)
110 3tri_A Pyrroline-5-carboxylate 98.5 4.2E-07 1.4E-11 83.5 11.1 112 165-294 3-119 (280)
111 3pid_A UDP-glucose 6-dehydroge 98.5 3.7E-07 1.3E-11 88.9 11.1 124 159-289 30-170 (432)
112 1f0y_A HCDH, L-3-hydroxyacyl-C 98.5 8.5E-07 2.9E-11 82.0 11.4 130 166-300 16-161 (302)
113 1yqg_A Pyrroline-5-carboxylate 98.4 3.4E-07 1.2E-11 82.6 7.1 101 167-289 2-103 (263)
114 1mv8_A GMD, GDP-mannose 6-dehy 98.4 9.1E-07 3.1E-11 86.2 10.5 118 167-288 2-140 (436)
115 1b0a_A Protein (fold bifunctio 98.4 7.1E-07 2.4E-11 81.9 8.9 168 33-275 58-234 (288)
116 4a5o_A Bifunctional protein fo 98.4 1.1E-06 3.8E-11 80.6 10.1 168 32-274 59-235 (286)
117 3gg2_A Sugar dehydrogenase, UD 98.4 1.8E-06 6.1E-11 84.6 12.1 119 166-288 3-138 (450)
118 1bg6_A N-(1-D-carboxylethyl)-L 98.4 1.2E-06 4.2E-11 82.3 10.3 118 166-288 5-124 (359)
119 3ngx_A Bifunctional protein fo 98.4 1.1E-06 3.7E-11 80.3 8.9 164 33-274 52-224 (276)
120 1jay_A Coenzyme F420H2:NADP+ o 98.4 2.2E-06 7.6E-11 74.6 10.7 123 167-304 2-137 (212)
121 2c2x_A Methylenetetrahydrofola 98.4 1.3E-06 4.4E-11 80.0 9.4 169 33-276 57-236 (281)
122 3l07_A Bifunctional protein fo 98.4 1.2E-06 4.1E-11 80.4 9.2 168 32-274 58-235 (285)
123 1a4i_A Methylenetetrahydrofola 98.4 1.4E-06 4.9E-11 80.4 9.6 169 33-276 60-241 (301)
124 4a7p_A UDP-glucose dehydrogena 98.3 3.2E-06 1.1E-10 82.7 12.3 119 166-288 9-145 (446)
125 2rcy_A Pyrroline carboxylate r 98.3 1.3E-06 4.3E-11 78.7 8.8 99 165-289 4-106 (262)
126 3mog_A Probable 3-hydroxybutyr 98.3 1.5E-06 5.1E-11 85.9 9.9 131 166-303 6-148 (483)
127 3k96_A Glycerol-3-phosphate de 98.3 4.2E-06 1.4E-10 79.5 11.7 118 165-287 29-152 (356)
128 1edz_A 5,10-methylenetetrahydr 98.3 1.2E-06 4.2E-11 81.8 7.6 102 159-275 171-278 (320)
129 2o3j_A UDP-glucose 6-dehydroge 98.3 4.1E-06 1.4E-10 82.7 11.0 120 166-288 10-151 (481)
130 1dlj_A UDP-glucose dehydrogena 98.2 5E-06 1.7E-10 80.2 11.3 110 167-289 2-134 (402)
131 3u62_A Shikimate dehydrogenase 98.2 5.8E-06 2E-10 74.9 10.9 106 163-289 107-214 (253)
132 3don_A Shikimate dehydrogenase 98.2 3.1E-06 1.1E-10 77.7 8.9 110 162-289 114-226 (277)
133 1txg_A Glycerol-3-phosphate de 98.2 3.5E-06 1.2E-10 78.4 9.4 109 167-288 2-124 (335)
134 1x0v_A GPD-C, GPDH-C, glycerol 98.2 3.4E-06 1.2E-10 79.3 9.3 108 165-276 8-128 (354)
135 1y81_A Conserved hypothetical 98.2 2.1E-06 7E-11 70.7 6.3 103 163-292 12-118 (138)
136 2y0c_A BCEC, UDP-glucose dehyd 98.2 6E-06 2E-10 81.5 10.6 120 165-288 8-144 (478)
137 1zcj_A Peroxisomal bifunctiona 98.2 1.3E-05 4.5E-10 78.7 12.8 131 165-300 37-175 (463)
138 1evy_A Glycerol-3-phosphate de 98.2 2E-06 7E-11 81.4 6.6 107 167-277 17-129 (366)
139 1wdk_A Fatty oxidation complex 98.2 8.3E-06 2.8E-10 84.3 11.5 129 165-300 314-454 (715)
140 3hdj_A Probable ornithine cycl 98.1 1.6E-05 5.5E-10 74.2 12.1 95 164-274 120-215 (313)
141 3g79_A NDP-N-acetyl-D-galactos 98.1 5.1E-06 1.8E-10 81.9 9.0 116 166-284 19-159 (478)
142 2dc1_A L-aspartate dehydrogena 98.1 6.1E-06 2.1E-10 73.5 8.3 96 167-290 2-102 (236)
143 3ojo_A CAP5O; rossmann fold, c 98.1 9.5E-06 3.2E-10 78.9 10.2 112 162-287 8-144 (431)
144 2egg_A AROE, shikimate 5-dehyd 98.1 1.6E-05 5.5E-10 73.6 11.0 114 162-289 138-255 (297)
145 2wtb_A MFP2, fatty acid multif 98.1 1.6E-05 5.4E-10 82.3 12.0 129 166-300 313-452 (725)
146 1x7d_A Ornithine cyclodeaminas 98.1 1.7E-05 5.9E-10 75.1 11.3 99 164-273 128-227 (350)
147 3c85_A Putative glutathione-re 98.1 2.3E-06 7.8E-11 72.9 4.8 100 161-273 35-140 (183)
148 1yj8_A Glycerol-3-phosphate de 98.1 5.2E-06 1.8E-10 79.0 7.7 106 166-275 22-144 (375)
149 4huj_A Uncharacterized protein 98.1 4.4E-06 1.5E-10 73.7 6.6 93 165-275 23-116 (220)
150 1ks9_A KPA reductase;, 2-dehyd 98.1 5.2E-06 1.8E-10 75.4 7.2 95 167-274 2-99 (291)
151 1z82_A Glycerol-3-phosphate de 98.1 6.3E-06 2.1E-10 77.2 7.7 112 165-287 14-127 (335)
152 2ew2_A 2-dehydropantoate 2-red 98.0 7E-06 2.4E-10 75.4 7.4 120 166-292 4-127 (316)
153 2duw_A Putative COA-binding pr 98.0 3.9E-06 1.3E-10 69.6 4.3 103 165-294 13-121 (145)
154 1vl6_A Malate oxidoreductase; 98.0 2.9E-05 9.9E-10 74.1 10.6 113 160-285 187-308 (388)
155 2qrj_A Saccharopine dehydrogen 98.0 9.6E-06 3.3E-10 77.7 7.1 83 164-272 213-300 (394)
156 2g1u_A Hypothetical protein TM 98.0 5.8E-05 2E-09 62.5 10.7 104 159-275 13-121 (155)
157 3ulk_A Ketol-acid reductoisome 97.9 2.4E-05 8.3E-10 75.5 9.0 99 162-275 34-134 (491)
158 2i76_A Hypothetical protein; N 97.9 3.3E-06 1.1E-10 77.1 2.1 87 166-274 3-91 (276)
159 3phh_A Shikimate dehydrogenase 97.9 4.5E-05 1.5E-09 69.6 9.5 107 165-290 118-225 (269)
160 3ado_A Lambda-crystallin; L-gu 97.9 6.2E-05 2.1E-09 70.3 10.5 132 165-301 6-149 (319)
161 1omo_A Alanine dehydrogenase; 97.9 7.8E-05 2.7E-09 69.7 11.2 93 164-272 124-217 (322)
162 1lss_A TRK system potassium up 97.9 6.8E-05 2.3E-09 60.0 9.4 95 165-271 4-102 (140)
163 2z2v_A Hypothetical protein PH 97.9 1.3E-05 4.4E-10 76.4 5.9 114 162-291 13-126 (365)
164 2qyt_A 2-dehydropantoate 2-red 97.9 1.8E-05 6.1E-10 72.9 6.5 117 166-290 9-134 (317)
165 3dfu_A Uncharacterized protein 97.8 1.2E-05 4.2E-10 71.8 4.8 69 166-272 7-75 (232)
166 3fwz_A Inner membrane protein 97.8 3.7E-05 1.3E-09 62.7 7.0 95 166-273 8-106 (140)
167 3i83_A 2-dehydropantoate 2-red 97.8 7.2E-05 2.4E-09 69.6 9.4 120 166-293 3-125 (320)
168 3ghy_A Ketopantoate reductase 97.8 2.6E-05 9.1E-10 73.0 6.5 122 165-293 3-143 (335)
169 3uuw_A Putative oxidoreductase 97.7 0.00015 5E-09 66.9 9.8 108 165-290 6-117 (308)
170 2hmt_A YUAA protein; RCK, KTN, 97.7 0.00015 5.1E-09 58.2 8.5 100 163-275 4-107 (144)
171 3o8q_A Shikimate 5-dehydrogena 97.7 8.2E-05 2.8E-09 68.3 7.7 114 161-289 122-237 (281)
172 3hwr_A 2-dehydropantoate 2-red 97.7 0.00011 3.7E-09 68.4 8.4 117 163-287 17-134 (318)
173 1nyt_A Shikimate 5-dehydrogena 97.6 0.00038 1.3E-08 63.2 11.6 113 162-289 116-230 (271)
174 3hn2_A 2-dehydropantoate 2-red 97.6 0.00019 6.4E-09 66.5 9.6 119 166-294 3-124 (312)
175 1p77_A Shikimate 5-dehydrogena 97.6 0.00012 4E-09 66.7 8.0 115 162-290 116-232 (272)
176 3c7a_A Octopine dehydrogenase; 97.6 0.00016 5.6E-09 69.2 9.2 103 166-271 3-115 (404)
177 3ic5_A Putative saccharopine d 97.6 7.7E-05 2.6E-09 57.9 5.3 94 164-272 4-100 (118)
178 3jyo_A Quinate/shikimate dehyd 97.6 0.00099 3.4E-08 61.1 13.4 120 162-290 124-246 (283)
179 3llv_A Exopolyphosphatase-rela 97.6 0.00014 4.7E-09 58.9 6.8 93 164-269 5-101 (141)
180 2a9f_A Putative malic enzyme ( 97.5 0.00013 4.4E-09 69.7 7.2 112 160-284 183-302 (398)
181 1id1_A Putative potassium chan 97.5 0.00019 6.6E-09 59.1 7.3 102 165-274 3-107 (153)
182 3pwz_A Shikimate dehydrogenase 97.5 0.00053 1.8E-08 62.5 10.8 113 161-289 116-231 (272)
183 3tnl_A Shikimate dehydrogenase 97.5 0.0012 4.2E-08 61.4 13.0 122 161-290 150-280 (315)
184 4b4u_A Bifunctional protein fo 97.5 0.00046 1.6E-08 63.6 9.8 167 32-273 77-252 (303)
185 1guz_A Malate dehydrogenase; o 97.5 0.00042 1.4E-08 64.3 9.4 123 167-295 2-143 (310)
186 2ho3_A Oxidoreductase, GFO/IDH 97.4 0.00064 2.2E-08 63.0 10.3 68 167-246 3-72 (325)
187 1tlt_A Putative oxidoreductase 97.4 0.00058 2E-08 63.1 9.9 109 166-292 6-118 (319)
188 1iuk_A Hypothetical protein TT 97.4 0.00048 1.7E-08 56.4 8.0 104 164-292 12-119 (140)
189 2dvm_A Malic enzyme, 439AA lon 97.4 0.00033 1.1E-08 68.1 8.0 117 161-290 182-312 (439)
190 3c1a_A Putative oxidoreductase 97.4 0.00025 8.7E-09 65.5 7.0 105 166-290 11-120 (315)
191 4hkt_A Inositol 2-dehydrogenas 97.4 0.00088 3E-08 62.2 10.5 68 166-247 4-74 (331)
192 1pzg_A LDH, lactate dehydrogen 97.4 0.00081 2.8E-08 63.0 10.2 105 166-273 10-133 (331)
193 2ewd_A Lactate dehydrogenase,; 97.4 0.00047 1.6E-08 64.0 8.4 117 165-286 4-135 (317)
194 3euw_A MYO-inositol dehydrogen 97.3 0.0011 3.7E-08 61.9 10.8 69 166-247 5-76 (344)
195 3dfz_A SIRC, precorrin-2 dehyd 97.3 0.00053 1.8E-08 60.8 8.1 97 160-273 26-122 (223)
196 3cea_A MYO-inositol 2-dehydrog 97.3 0.00089 3E-08 62.4 9.8 69 166-246 9-81 (346)
197 3fbt_A Chorismate mutase and s 97.3 0.00067 2.3E-08 62.2 8.6 108 162-289 119-230 (282)
198 3db2_A Putative NADPH-dependen 97.3 0.001 3.4E-08 62.5 10.0 69 166-248 6-78 (354)
199 1hyh_A L-hicdh, L-2-hydroxyiso 97.3 0.00085 2.9E-08 62.0 9.3 76 166-246 2-79 (309)
200 2d59_A Hypothetical protein PH 97.3 0.00062 2.1E-08 56.0 7.4 101 165-292 22-126 (144)
201 3vtf_A UDP-glucose 6-dehydroge 97.3 0.0012 4E-08 64.4 10.5 146 164-317 20-194 (444)
202 4fgw_A Glycerol-3-phosphate de 97.3 0.00067 2.3E-08 65.0 8.7 106 167-275 36-154 (391)
203 3t4e_A Quinate/shikimate dehyd 97.3 0.002 6.8E-08 59.9 11.7 121 161-290 144-274 (312)
204 1xea_A Oxidoreductase, GFO/IDH 97.3 0.001 3.4E-08 61.7 9.7 110 166-292 3-116 (323)
205 3evn_A Oxidoreductase, GFO/IDH 97.3 0.00096 3.3E-08 62.0 9.4 69 166-246 6-77 (329)
206 2glx_A 1,5-anhydro-D-fructose 97.3 0.00095 3.2E-08 61.8 9.3 66 167-245 2-71 (332)
207 3e9m_A Oxidoreductase, GFO/IDH 97.2 0.0011 3.9E-08 61.6 9.8 70 166-247 6-78 (330)
208 3ezy_A Dehydrogenase; structur 97.2 0.0012 4.1E-08 61.7 9.9 69 166-246 3-74 (344)
209 1vlv_A Otcase, ornithine carba 97.2 0.062 2.1E-06 50.0 21.2 115 162-280 164-296 (325)
210 3bio_A Oxidoreductase, GFO/IDH 97.2 0.00054 1.8E-08 63.3 7.1 104 166-290 10-117 (304)
211 1jw9_B Molybdopterin biosynthe 97.2 0.00016 5.3E-09 65.1 3.2 96 161-261 27-145 (249)
212 1a5z_A L-lactate dehydrogenase 97.2 0.0015 5E-08 60.8 10.0 122 166-294 1-140 (319)
213 2ef0_A Ornithine carbamoyltran 97.2 0.063 2.1E-06 49.5 20.6 107 162-281 151-273 (301)
214 1nvt_A Shikimate 5'-dehydrogen 97.2 0.00097 3.3E-08 61.0 8.4 117 162-288 125-244 (287)
215 3q2i_A Dehydrogenase; rossmann 97.2 0.0012 4.3E-08 61.8 9.3 68 166-246 14-85 (354)
216 1duv_G Octase-1, ornithine tra 97.1 0.053 1.8E-06 50.6 19.8 106 162-271 152-273 (333)
217 1pvv_A Otcase, ornithine carba 97.1 0.13 4.3E-06 47.7 22.1 115 162-280 152-282 (315)
218 3e18_A Oxidoreductase; dehydro 97.1 0.0012 4.2E-08 62.2 8.6 66 166-246 6-75 (359)
219 3fef_A Putative glucosidase LP 97.1 0.0013 4.5E-08 64.1 8.9 116 164-285 4-159 (450)
220 3rc1_A Sugar 3-ketoreductase; 97.1 0.0018 6.2E-08 60.8 9.5 72 163-247 25-100 (350)
221 1ydw_A AX110P-like protein; st 97.1 0.0031 1.1E-07 59.3 11.1 113 166-292 7-124 (362)
222 3q2o_A Phosphoribosylaminoimid 97.1 0.0013 4.3E-08 62.6 8.5 39 161-200 10-48 (389)
223 3e82_A Putative oxidoreductase 97.1 0.002 6.9E-08 60.8 9.8 65 166-246 8-77 (364)
224 3mz0_A Inositol 2-dehydrogenas 97.1 0.0016 5.5E-08 60.8 9.0 71 166-247 3-77 (344)
225 2hjr_A Malate dehydrogenase; m 97.1 0.0021 7.2E-08 60.0 9.7 103 166-273 15-132 (328)
226 2v6b_A L-LDH, L-lactate dehydr 97.1 0.0013 4.4E-08 60.8 8.1 123 166-294 1-138 (304)
227 3g17_A Similar to 2-dehydropan 97.1 0.00015 5E-09 66.6 1.5 98 166-277 3-101 (294)
228 1t2d_A LDH-P, L-lactate dehydr 97.0 0.0024 8.4E-08 59.5 9.8 104 166-273 5-127 (322)
229 3ego_A Probable 2-dehydropanto 97.0 0.00076 2.6E-08 62.3 6.2 117 166-294 3-120 (307)
230 1dxh_A Ornithine carbamoyltran 97.0 0.037 1.3E-06 51.8 17.7 106 162-271 152-273 (335)
231 1f06_A MESO-diaminopimelate D- 97.0 0.0016 5.5E-08 60.5 8.2 103 166-290 4-110 (320)
232 1obb_A Maltase, alpha-glucosid 97.0 0.0013 4.6E-08 64.6 7.9 128 165-295 3-174 (480)
233 3ohs_X Trans-1,2-dihydrobenzen 97.0 0.0042 1.5E-07 57.7 10.9 69 166-247 3-77 (334)
234 1oth_A Protein (ornithine tran 96.9 0.053 1.8E-06 50.4 17.7 140 105-272 119-271 (321)
235 3l4b_C TRKA K+ channel protien 96.9 0.002 6.8E-08 56.1 7.6 94 167-272 2-99 (218)
236 2i6u_A Otcase, ornithine carba 96.9 0.019 6.6E-07 53.1 14.4 148 105-280 112-276 (307)
237 3m2t_A Probable dehydrogenase; 96.9 0.0019 6.6E-08 60.8 7.7 68 166-245 6-77 (359)
238 1j5p_A Aspartate dehydrogenase 96.9 0.0024 8.3E-08 57.5 7.8 99 163-290 10-112 (253)
239 3ec7_A Putative dehydrogenase; 96.9 0.0031 1.1E-07 59.3 8.9 74 163-247 21-98 (357)
240 1h6d_A Precursor form of gluco 96.9 0.0025 8.5E-08 61.8 8.4 73 166-246 84-160 (433)
241 1ldn_A L-lactate dehydrogenase 96.9 0.0031 1.1E-07 58.5 8.7 109 165-280 6-129 (316)
242 2w37_A Ornithine carbamoyltran 96.8 0.075 2.6E-06 50.1 18.1 139 105-271 140-294 (359)
243 3l9w_A Glutathione-regulated p 96.8 0.0014 4.6E-08 63.4 6.2 96 165-273 4-103 (413)
244 3r7f_A Aspartate carbamoyltran 96.8 0.043 1.5E-06 50.6 16.0 132 105-278 110-259 (304)
245 2axq_A Saccharopine dehydrogen 96.8 0.0024 8.2E-08 62.6 8.0 81 159-247 17-99 (467)
246 3f4l_A Putative oxidoreductase 96.8 0.0015 5.1E-08 61.1 6.3 69 166-247 3-76 (345)
247 1pg5_A Aspartate carbamoyltran 96.8 0.027 9.2E-07 51.9 14.4 103 162-275 146-264 (299)
248 2nu8_A Succinyl-COA ligase [AD 96.8 0.0026 8.8E-08 58.4 7.6 106 165-292 7-117 (288)
249 3qy9_A DHPR, dihydrodipicolina 96.8 0.0022 7.6E-08 57.4 6.7 81 166-274 4-85 (243)
250 3aog_A Glutamate dehydrogenase 96.7 0.018 6.2E-07 55.8 13.4 116 161-291 231-357 (440)
251 2aef_A Calcium-gated potassium 96.7 0.0036 1.2E-07 55.0 7.9 90 165-269 9-102 (234)
252 3tpf_A Otcase, ornithine carba 96.7 0.21 7E-06 46.1 19.9 115 162-280 142-273 (307)
253 4amu_A Ornithine carbamoyltran 96.7 0.022 7.6E-07 53.8 13.4 140 104-271 143-299 (365)
254 3gd5_A Otcase, ornithine carba 96.7 0.21 7E-06 46.4 19.7 115 162-280 154-284 (323)
255 3zwc_A Peroxisomal bifunctiona 96.7 0.007 2.4E-07 62.6 10.7 147 166-322 317-471 (742)
256 1oju_A MDH, malate dehydrogena 96.7 0.01 3.4E-07 54.6 10.5 125 167-297 2-147 (294)
257 3abi_A Putative uncharacterize 96.6 0.0044 1.5E-07 58.5 8.2 70 165-246 16-87 (365)
258 4had_A Probable oxidoreductase 96.6 0.0062 2.1E-07 56.7 9.1 68 167-246 25-96 (350)
259 3vku_A L-LDH, L-lactate dehydr 96.6 0.0059 2E-07 57.1 8.8 110 163-280 7-131 (326)
260 4a7p_A UDP-glucose dehydrogena 96.6 0.012 4.1E-07 57.3 11.1 104 160-283 317-431 (446)
261 3tl2_A Malate dehydrogenase; c 96.6 0.012 4.1E-07 54.7 10.6 114 164-282 7-135 (315)
262 1lld_A L-lactate dehydrogenase 96.6 0.014 4.8E-07 53.6 11.0 105 165-275 7-127 (319)
263 3orq_A N5-carboxyaminoimidazol 96.6 0.0015 5.2E-08 62.0 4.3 39 162-201 9-47 (377)
264 2we8_A Xanthine dehydrogenase; 96.5 0.0051 1.7E-07 58.8 7.8 87 165-289 204-296 (386)
265 4h31_A Otcase, ornithine carba 96.5 0.32 1.1E-05 45.8 20.0 141 105-271 143-299 (358)
266 2p2s_A Putative oxidoreductase 96.5 0.0056 1.9E-07 56.8 7.9 68 166-246 5-76 (336)
267 3grf_A Ornithine carbamoyltran 96.5 0.23 7.8E-06 46.2 18.8 155 105-280 118-294 (328)
268 4a8p_A Putrescine carbamoyltra 96.5 0.34 1.2E-05 45.5 19.9 114 162-280 150-281 (355)
269 3kux_A Putative oxidoreductase 96.5 0.0066 2.3E-07 56.8 8.3 68 166-248 8-79 (352)
270 1zud_1 Adenylyltransferase THI 96.5 0.0018 6E-08 58.2 4.1 95 161-261 24-142 (251)
271 1u8x_X Maltose-6'-phosphate gl 96.5 0.0046 1.6E-07 60.7 7.2 127 165-294 28-193 (472)
272 4a8t_A Putrescine carbamoyltra 96.4 0.29 1E-05 45.7 19.0 150 105-280 136-303 (339)
273 3gdo_A Uncharacterized oxidore 96.4 0.0048 1.6E-07 58.0 6.9 67 166-248 6-77 (358)
274 3nep_X Malate dehydrogenase; h 96.4 0.015 5.1E-07 54.0 10.1 110 166-282 1-126 (314)
275 3d0o_A L-LDH 1, L-lactate dehy 96.4 0.019 6.5E-07 53.2 10.7 123 165-294 6-147 (317)
276 3pqe_A L-LDH, L-lactate dehydr 96.4 0.0086 2.9E-07 55.9 8.3 108 165-280 5-128 (326)
277 1y6j_A L-lactate dehydrogenase 96.4 0.0095 3.2E-07 55.3 8.5 123 166-297 8-152 (318)
278 2cdc_A Glucose dehydrogenase g 96.4 0.0032 1.1E-07 59.2 5.4 95 162-273 178-279 (366)
279 4fb5_A Probable oxidoreductase 96.4 0.0086 2.9E-07 56.2 8.4 71 163-246 23-104 (393)
280 4ep1_A Otcase, ornithine carba 96.4 0.071 2.4E-06 49.9 14.4 115 162-280 176-305 (340)
281 2tmg_A Protein (glutamate dehy 96.4 0.053 1.8E-06 52.2 13.8 118 160-292 204-333 (415)
282 3rui_A Ubiquitin-like modifier 96.4 0.0052 1.8E-07 57.7 6.7 103 161-272 30-171 (340)
283 1hdg_O Holo-D-glyceraldehyde-3 96.3 0.0081 2.8E-07 56.2 7.8 32 166-197 1-34 (332)
284 1pjq_A CYSG, siroheme synthase 96.3 0.0056 1.9E-07 59.8 6.9 44 160-204 7-50 (457)
285 2czc_A Glyceraldehyde-3-phosph 96.3 0.0086 2.9E-07 56.0 7.9 78 167-247 4-90 (334)
286 1yqd_A Sinapyl alcohol dehydro 96.3 0.0055 1.9E-07 57.7 6.6 94 164-273 187-283 (366)
287 3moi_A Probable dehydrogenase; 96.3 0.0088 3E-07 56.8 8.0 68 166-246 3-74 (387)
288 3p7m_A Malate dehydrogenase; p 96.3 0.018 6.3E-07 53.5 10.0 110 164-280 4-128 (321)
289 3gvi_A Malate dehydrogenase; N 96.3 0.0096 3.3E-07 55.5 8.0 106 163-273 5-125 (324)
290 1s6y_A 6-phospho-beta-glucosid 96.3 0.011 3.8E-07 57.6 8.8 126 166-294 8-174 (450)
291 3ldh_A Lactate dehydrogenase; 96.3 0.0057 2E-07 57.2 6.4 110 164-280 20-144 (330)
292 1ur5_A Malate dehydrogenase; o 96.3 0.0091 3.1E-07 55.2 7.7 107 166-279 3-124 (309)
293 4f2g_A Otcase 1, ornithine car 96.3 0.073 2.5E-06 49.2 13.7 142 105-280 118-275 (309)
294 1u8f_O GAPDH, glyceraldehyde-3 96.3 0.012 4E-07 55.2 8.4 31 166-196 4-34 (335)
295 2vt3_A REX, redox-sensing tran 96.3 0.0038 1.3E-07 54.9 4.7 68 166-246 86-155 (215)
296 1ff9_A Saccharopine reductase; 96.2 0.0041 1.4E-07 60.6 5.4 76 164-247 2-79 (450)
297 1rjw_A ADH-HT, alcohol dehydro 96.2 0.0088 3E-07 55.6 7.4 95 164-273 164-262 (339)
298 2zqz_A L-LDH, L-lactate dehydr 96.2 0.0086 2.9E-07 55.9 7.3 122 165-294 9-149 (326)
299 2d8a_A PH0655, probable L-thre 96.2 0.0058 2E-07 57.0 6.1 95 164-273 167-268 (348)
300 1ez4_A Lactate dehydrogenase; 96.2 0.0078 2.7E-07 56.0 6.9 121 166-294 6-145 (318)
301 1piw_A Hypothetical zinc-type 96.2 0.008 2.7E-07 56.4 7.0 96 164-272 179-276 (360)
302 4gqa_A NAD binding oxidoreduct 96.2 0.011 3.7E-07 56.5 8.0 68 167-246 28-106 (412)
303 1oi7_A Succinyl-COA synthetase 96.2 0.012 4.2E-07 53.9 8.0 106 165-292 7-117 (288)
304 3ip1_A Alcohol dehydrogenase, 96.2 0.017 5.8E-07 55.1 9.3 101 163-273 212-319 (404)
305 1b7g_O Protein (glyceraldehyde 96.2 0.0093 3.2E-07 56.0 7.3 80 167-247 3-88 (340)
306 1npy_A Hypothetical shikimate 96.1 0.028 9.6E-07 51.0 10.1 106 164-289 118-229 (271)
307 1cdo_A Alcohol dehydrogenase; 96.1 0.029 9.9E-07 52.7 10.6 95 164-273 192-295 (374)
308 4f3y_A DHPR, dihydrodipicolina 96.1 0.0099 3.4E-07 54.1 6.9 73 166-245 8-82 (272)
309 2i6t_A Ubiquitin-conjugating e 96.1 0.0064 2.2E-07 56.2 5.8 98 165-273 14-126 (303)
310 3two_A Mannitol dehydrogenase; 96.1 0.0085 2.9E-07 55.9 6.7 91 164-273 176-266 (348)
311 1pqw_A Polyketide synthase; ro 96.1 0.0073 2.5E-07 51.3 5.7 95 164-274 38-139 (198)
312 2yfq_A Padgh, NAD-GDH, NAD-spe 96.1 0.025 8.6E-07 54.5 10.0 116 161-291 208-339 (421)
313 1zq6_A Otcase, ornithine carba 96.1 0.54 1.9E-05 44.2 18.8 148 104-280 152-326 (359)
314 3e8x_A Putative NAD-dependent 96.1 0.015 5.2E-07 50.6 7.8 76 161-247 17-95 (236)
315 4ew6_A D-galactose-1-dehydroge 96.1 0.0093 3.2E-07 55.5 6.7 62 164-245 24-90 (330)
316 3s2e_A Zinc-containing alcohol 96.1 0.0091 3.1E-07 55.4 6.7 115 164-293 166-308 (340)
317 3on5_A BH1974 protein; structu 96.1 0.0098 3.3E-07 56.3 6.8 87 165-289 199-287 (362)
318 4fcc_A Glutamate dehydrogenase 96.1 0.017 5.7E-07 56.1 8.5 119 161-292 231-368 (450)
319 3fhl_A Putative oxidoreductase 96.0 0.0069 2.4E-07 57.0 5.7 66 166-246 6-75 (362)
320 3ojo_A CAP5O; rossmann fold, c 96.0 0.025 8.6E-07 54.8 9.8 87 162-275 312-409 (431)
321 3k92_A NAD-GDH, NAD-specific g 96.0 0.025 8.5E-07 54.5 9.6 115 161-292 217-343 (424)
322 3i23_A Oxidoreductase, GFO/IDH 96.0 0.0098 3.4E-07 55.6 6.6 68 166-246 3-75 (349)
323 1kyq_A Met8P, siroheme biosynt 96.0 0.0056 1.9E-07 55.8 4.7 40 160-200 8-47 (274)
324 2jhf_A Alcohol dehydrogenase E 96.0 0.028 9.4E-07 52.9 9.8 94 164-272 191-293 (374)
325 3gg2_A Sugar dehydrogenase, UD 96.0 0.039 1.3E-06 53.7 11.0 96 161-274 314-420 (450)
326 3cmc_O GAPDH, glyceraldehyde-3 96.0 0.012 4.1E-07 55.1 7.0 32 167-198 3-34 (334)
327 1zh8_A Oxidoreductase; TM0312, 96.0 0.021 7.2E-07 53.1 8.7 68 166-246 19-92 (340)
328 1uuf_A YAHK, zinc-type alcohol 96.0 0.008 2.7E-07 56.7 5.9 93 164-273 194-289 (369)
329 1p0f_A NADP-dependent alcohol 96.0 0.027 9.1E-07 53.0 9.5 94 164-272 191-293 (373)
330 3tum_A Shikimate dehydrogenase 96.0 0.03 1E-06 50.8 9.4 119 161-290 121-242 (269)
331 1e3j_A NADP(H)-dependent ketos 96.0 0.035 1.2E-06 51.7 10.2 95 164-273 168-272 (352)
332 4ej6_A Putative zinc-binding d 96.0 0.011 3.9E-07 55.6 6.8 94 164-272 182-284 (370)
333 3ijr_A Oxidoreductase, short c 95.9 0.03 1E-06 50.9 9.3 109 161-274 43-184 (291)
334 3fi9_A Malate dehydrogenase; s 95.9 0.019 6.5E-07 54.0 8.1 113 163-284 6-136 (343)
335 2fp4_A Succinyl-COA ligase [GD 95.9 0.02 7E-07 52.8 8.2 110 161-292 9-125 (305)
336 1e3i_A Alcohol dehydrogenase, 95.9 0.035 1.2E-06 52.2 10.0 94 164-272 195-297 (376)
337 4e4t_A Phosphoribosylaminoimid 95.9 0.0074 2.5E-07 58.2 5.3 39 162-201 32-70 (419)
338 1lu9_A Methylene tetrahydromet 95.9 0.017 6E-07 52.4 7.6 80 162-246 116-198 (287)
339 1xyg_A Putative N-acetyl-gamma 95.9 0.029 9.9E-07 53.0 9.2 96 164-273 15-113 (359)
340 3dty_A Oxidoreductase, GFO/IDH 95.9 0.018 6.2E-07 54.8 7.9 73 165-247 12-96 (398)
341 1cf2_P Protein (glyceraldehyde 95.9 0.02 6.8E-07 53.7 8.0 80 167-247 3-89 (337)
342 2fzw_A Alcohol dehydrogenase c 95.9 0.031 1.1E-06 52.4 9.4 94 164-272 190-292 (373)
343 3u3x_A Oxidoreductase; structu 95.8 0.031 1E-06 52.6 9.3 69 165-246 26-98 (361)
344 2dt5_A AT-rich DNA-binding pro 95.8 0.0068 2.3E-07 53.1 4.3 67 166-246 81-150 (211)
345 4h3v_A Oxidoreductase domain p 95.8 0.014 4.8E-07 54.6 6.8 69 166-246 7-85 (390)
346 1pl8_A Human sorbitol dehydrog 95.8 0.02 7E-07 53.5 7.9 95 164-273 171-274 (356)
347 1iz0_A Quinone oxidoreductase; 95.8 0.011 3.8E-07 53.9 5.9 93 164-273 125-219 (302)
348 3g79_A NDP-N-acetyl-D-galactos 95.8 0.029 9.8E-07 55.1 9.1 98 161-282 349-458 (478)
349 4gsl_A Ubiquitin-like modifier 95.8 0.015 5E-07 58.6 7.0 103 161-272 322-463 (615)
350 1ys4_A Aspartate-semialdehyde 95.8 0.0095 3.3E-07 56.1 5.4 102 166-273 9-115 (354)
351 2dq4_A L-threonine 3-dehydroge 95.8 0.016 5.5E-07 53.8 6.9 94 164-273 164-263 (343)
352 2hcy_A Alcohol dehydrogenase 1 95.7 0.021 7E-07 53.2 7.5 95 164-273 169-270 (347)
353 2nvw_A Galactose/lactose metab 95.7 0.03 1E-06 54.8 9.0 70 165-245 39-117 (479)
354 3ijp_A DHPR, dihydrodipicolina 95.7 0.022 7.5E-07 52.2 7.4 98 166-274 22-121 (288)
355 3vh1_A Ubiquitin-like modifier 95.7 0.018 6E-07 57.9 7.3 104 161-272 323-464 (598)
356 3r6d_A NAD-dependent epimerase 95.7 0.01 3.5E-07 51.2 4.9 102 165-276 5-111 (221)
357 3btv_A Galactose/lactose metab 95.7 0.016 5.6E-07 56.0 6.9 70 166-246 21-99 (438)
358 1ml4_A Aspartate transcarbamoy 95.7 0.028 9.5E-07 52.0 8.0 106 162-275 152-272 (308)
359 3sds_A Ornithine carbamoyltran 95.7 1.4 4.8E-05 41.3 21.2 107 161-272 184-308 (353)
360 2ozp_A N-acetyl-gamma-glutamyl 95.7 0.025 8.5E-07 53.1 7.8 95 166-273 5-100 (345)
361 3do5_A HOM, homoserine dehydro 95.7 0.025 8.5E-07 52.8 7.7 116 167-291 4-135 (327)
362 4eye_A Probable oxidoreductase 95.7 0.019 6.3E-07 53.5 6.8 92 164-272 159-257 (342)
363 3cps_A Glyceraldehyde 3-phosph 95.6 0.045 1.6E-06 51.6 9.4 31 166-196 18-48 (354)
364 2ixa_A Alpha-N-acetylgalactosa 95.6 0.028 9.7E-07 54.3 8.3 74 166-246 21-101 (444)
365 3e5r_O PP38, glyceraldehyde-3- 95.6 0.026 9E-07 52.8 7.7 30 167-196 5-34 (337)
366 2yyy_A Glyceraldehyde-3-phosph 95.6 0.018 6E-07 54.2 6.5 31 166-196 3-33 (343)
367 3uog_A Alcohol dehydrogenase; 95.6 0.021 7.2E-07 53.6 7.0 94 164-273 189-288 (363)
368 1gad_O D-glyceraldehyde-3-phos 95.6 0.031 1.1E-06 52.2 8.1 32 167-198 3-34 (330)
369 2xxj_A L-LDH, L-lactate dehydr 95.6 0.022 7.4E-07 52.7 7.0 107 166-280 1-122 (310)
370 3uko_A Alcohol dehydrogenase c 95.6 0.032 1.1E-06 52.6 8.3 94 164-272 193-295 (378)
371 1v3u_A Leukotriene B4 12- hydr 95.6 0.03 1E-06 51.7 7.8 94 164-273 145-245 (333)
372 3v5n_A Oxidoreductase; structu 95.5 0.054 1.9E-06 51.9 9.8 73 165-247 37-121 (417)
373 3o9z_A Lipopolysaccaride biosy 95.5 0.024 8E-07 52.3 6.9 67 166-246 4-82 (312)
374 4b7c_A Probable oxidoreductase 95.5 0.015 5.3E-07 53.7 5.7 95 164-273 149-249 (336)
375 1f8f_A Benzyl alcohol dehydrog 95.5 0.017 5.8E-07 54.3 6.0 95 164-273 190-290 (371)
376 4dup_A Quinone oxidoreductase; 95.5 0.017 6E-07 53.9 6.0 94 164-273 167-266 (353)
377 3lk7_A UDP-N-acetylmuramoylala 95.5 0.025 8.4E-07 54.9 7.2 120 162-290 6-138 (451)
378 3csu_A Protein (aspartate carb 95.5 0.042 1.4E-06 50.8 8.4 111 162-280 151-276 (310)
379 3qvo_A NMRA family protein; st 95.5 0.0087 3E-07 52.4 3.6 102 163-276 21-128 (236)
380 2y0c_A BCEC, UDP-glucose dehyd 95.4 0.13 4.6E-06 50.2 12.4 110 161-282 324-447 (478)
381 3fpc_A NADP-dependent alcohol 95.4 0.018 6.3E-07 53.6 5.9 94 164-272 166-266 (352)
382 1rm4_O Glyceraldehyde 3-phosph 95.4 0.032 1.1E-06 52.3 7.4 30 167-196 3-34 (337)
383 4aj2_A L-lactate dehydrogenase 95.4 0.054 1.8E-06 50.6 9.0 112 162-280 16-142 (331)
384 2d4a_B Malate dehydrogenase; a 95.4 0.02 6.8E-07 52.9 5.9 106 167-279 1-121 (308)
385 3d6n_B Aspartate carbamoyltran 95.4 0.61 2.1E-05 42.6 15.7 69 162-246 143-214 (291)
386 3hhp_A Malate dehydrogenase; M 95.3 0.085 2.9E-06 48.8 10.0 109 166-283 1-127 (312)
387 1hdo_A Biliverdin IX beta redu 95.3 0.11 3.7E-06 43.5 9.9 73 165-247 3-78 (206)
388 3h9e_O Glyceraldehyde-3-phosph 95.3 0.022 7.5E-07 53.4 5.9 35 166-201 8-43 (346)
389 2x5j_O E4PDH, D-erythrose-4-ph 95.3 0.041 1.4E-06 51.5 7.8 31 167-197 4-37 (339)
390 3tqh_A Quinone oxidoreductase; 95.3 0.016 5.4E-07 53.4 4.9 92 164-272 152-245 (321)
391 2rir_A Dipicolinate synthase, 95.3 0.068 2.3E-06 48.8 9.1 109 163-294 5-123 (300)
392 1lc0_A Biliverdin reductase A; 95.3 0.024 8.4E-07 51.7 6.1 62 166-246 8-75 (294)
393 3oa2_A WBPB; oxidoreductase, s 95.2 0.03 1E-06 51.7 6.7 67 166-246 4-83 (318)
394 3keo_A Redox-sensing transcrip 95.2 0.018 6.2E-07 50.4 4.8 70 166-247 85-159 (212)
395 2cf5_A Atccad5, CAD, cinnamyl 95.2 0.029 9.9E-07 52.5 6.5 93 164-272 180-275 (357)
396 1nvm_B Acetaldehyde dehydrogen 95.2 0.044 1.5E-06 50.7 7.5 69 166-245 5-80 (312)
397 3eag_A UDP-N-acetylmuramate:L- 95.2 0.044 1.5E-06 50.8 7.6 114 165-289 4-133 (326)
398 1mld_A Malate dehydrogenase; o 95.1 0.071 2.4E-06 49.3 8.9 104 167-281 2-124 (314)
399 3h8v_A Ubiquitin-like modifier 95.1 0.036 1.2E-06 50.9 6.7 38 161-199 32-70 (292)
400 3v2g_A 3-oxoacyl-[acyl-carrier 95.1 0.053 1.8E-06 48.6 7.8 108 161-273 27-166 (271)
401 3h2s_A Putative NADH-flavin re 95.1 0.1 3.6E-06 44.5 9.4 97 167-274 2-106 (224)
402 1v9l_A Glutamate dehydrogenase 95.1 0.12 4E-06 49.9 10.5 120 160-292 205-339 (421)
403 2nqt_A N-acetyl-gamma-glutamyl 95.1 0.11 3.9E-06 48.8 10.3 103 165-282 9-120 (352)
404 3aoe_E Glutamate dehydrogenase 95.1 0.32 1.1E-05 46.7 13.5 113 161-292 214-337 (419)
405 2yv1_A Succinyl-COA ligase [AD 95.1 0.031 1.1E-06 51.3 6.2 105 166-292 14-123 (294)
406 3qwb_A Probable quinone oxidor 95.1 0.03 1E-06 51.8 6.1 93 164-272 148-247 (334)
407 3oqb_A Oxidoreductase; structu 95.1 0.039 1.3E-06 52.0 7.0 69 166-246 7-93 (383)
408 3gms_A Putative NADPH:quinone 95.0 0.022 7.4E-07 52.9 5.1 94 164-273 144-244 (340)
409 2c0c_A Zinc binding alcohol de 95.0 0.024 8.2E-07 53.2 5.4 94 164-273 163-262 (362)
410 3r3s_A Oxidoreductase; structu 95.0 0.082 2.8E-06 47.9 8.9 39 161-200 45-84 (294)
411 3jv7_A ADH-A; dehydrogenase, n 95.0 0.045 1.5E-06 50.7 7.3 114 164-293 171-315 (345)
412 3jyn_A Quinone oxidoreductase; 95.0 0.031 1.1E-06 51.4 6.0 94 164-273 140-240 (325)
413 3ff4_A Uncharacterized protein 95.0 0.03 1E-06 44.6 5.1 99 166-292 5-107 (122)
414 3vtf_A UDP-glucose 6-dehydroge 95.0 0.13 4.5E-06 49.8 10.5 90 161-274 329-428 (444)
415 3k31_A Enoyl-(acyl-carrier-pro 95.0 0.047 1.6E-06 49.6 7.1 39 161-200 26-67 (296)
416 3ew7_A LMO0794 protein; Q8Y8U8 94.9 0.096 3.3E-06 44.5 8.6 97 166-274 1-104 (221)
417 4ina_A Saccharopine dehydrogen 94.9 0.037 1.3E-06 53.0 6.4 78 166-246 2-86 (405)
418 2h6e_A ADH-4, D-arabinose 1-de 94.9 0.017 6E-07 53.6 4.0 94 164-272 170-269 (344)
419 1dih_A Dihydrodipicolinate red 94.9 0.026 9E-07 51.2 5.1 74 166-245 6-81 (273)
420 1b8p_A Protein (malate dehydro 94.9 0.13 4.4E-06 47.8 9.9 102 166-272 6-133 (329)
421 3b1j_A Glyceraldehyde 3-phosph 94.9 0.044 1.5E-06 51.4 6.7 30 167-196 4-35 (339)
422 2pd4_A Enoyl-[acyl-carrier-pro 94.9 0.03 1E-06 50.2 5.4 38 162-200 3-43 (275)
423 4ekn_B Aspartate carbamoyltran 94.8 0.3 1E-05 45.0 12.1 106 162-277 148-269 (306)
424 2d2i_A Glyceraldehyde 3-phosph 94.8 0.046 1.6E-06 52.0 6.6 31 167-197 4-36 (380)
425 3ip3_A Oxidoreductase, putativ 94.8 0.024 8.3E-07 52.6 4.7 71 166-245 3-76 (337)
426 3m6i_A L-arabinitol 4-dehydrog 94.7 0.11 3.7E-06 48.5 9.1 97 164-273 179-284 (363)
427 1qor_A Quinone oxidoreductase; 94.7 0.045 1.5E-06 50.3 6.4 94 164-273 140-240 (327)
428 2q3e_A UDP-glucose 6-dehydroge 94.7 0.14 4.7E-06 49.9 10.1 110 162-279 326-448 (467)
429 4gmf_A Yersiniabactin biosynth 94.7 0.03 1E-06 53.1 5.2 68 165-247 7-77 (372)
430 1vj0_A Alcohol dehydrogenase, 94.7 0.048 1.6E-06 51.5 6.5 95 164-273 195-299 (380)
431 3oig_A Enoyl-[acyl-carrier-pro 94.7 0.17 5.8E-06 44.7 9.9 38 162-200 4-44 (266)
432 3is3_A 17BETA-hydroxysteroid d 94.7 0.065 2.2E-06 47.8 7.1 111 160-275 13-155 (270)
433 1mv8_A GMD, GDP-mannose 6-dehy 94.6 0.1 3.6E-06 50.2 8.9 97 164-271 312-419 (436)
434 2b5w_A Glucose dehydrogenase; 94.6 0.036 1.2E-06 51.8 5.5 94 163-273 171-274 (357)
435 2vn8_A Reticulon-4-interacting 94.6 0.16 5.5E-06 47.6 10.0 96 164-274 183-282 (375)
436 2ep5_A 350AA long hypothetical 94.6 0.058 2E-06 50.7 6.8 99 166-273 5-109 (350)
437 1kol_A Formaldehyde dehydrogen 94.6 0.066 2.3E-06 50.7 7.3 99 164-272 185-300 (398)
438 3pi7_A NADH oxidoreductase; gr 94.6 0.088 3E-06 48.9 8.0 92 166-273 166-264 (349)
439 3nv9_A Malic enzyme; rossmann 94.6 0.71 2.4E-05 44.8 14.3 133 108-276 186-331 (487)
440 3grk_A Enoyl-(acyl-carrier-pro 94.6 0.079 2.7E-06 48.1 7.5 38 161-199 27-67 (293)
441 2eih_A Alcohol dehydrogenase; 94.6 0.052 1.8E-06 50.3 6.4 94 164-273 166-266 (343)
442 2j3h_A NADP-dependent oxidored 94.5 0.045 1.5E-06 50.6 5.9 94 164-272 155-255 (345)
443 2yv2_A Succinyl-COA synthetase 94.5 0.064 2.2E-06 49.2 6.8 105 166-292 14-124 (297)
444 1js1_X Transcarbamylase; alpha 94.5 3 0.0001 38.6 18.5 137 105-280 131-286 (324)
445 3fbg_A Putative arginate lyase 94.5 0.049 1.7E-06 50.6 6.0 93 164-272 150-248 (346)
446 2dph_A Formaldehyde dismutase; 94.4 0.047 1.6E-06 51.8 5.9 98 164-272 185-299 (398)
447 2yfk_A Aspartate/ornithine car 94.4 0.074 2.5E-06 51.1 7.2 105 163-271 186-330 (418)
448 2g82_O GAPDH, glyceraldehyde-3 94.4 0.056 1.9E-06 50.5 6.2 30 167-197 2-31 (331)
449 2o3j_A UDP-glucose 6-dehydroge 94.4 0.37 1.3E-05 47.0 12.4 113 162-284 332-457 (481)
450 3upl_A Oxidoreductase; rossman 94.4 0.12 4.1E-06 50.2 8.6 118 166-289 24-157 (446)
451 3i6i_A Putative leucoanthocyan 94.4 0.085 2.9E-06 48.6 7.4 79 163-246 8-93 (346)
452 1y8q_A Ubiquitin-like 1 activa 94.3 0.055 1.9E-06 50.8 6.0 95 161-261 32-149 (346)
453 3pxx_A Carveol dehydrogenase; 94.3 0.16 5.4E-06 45.4 8.9 37 161-198 6-43 (287)
454 2h7i_A Enoyl-[acyl-carrier-pro 94.2 0.046 1.6E-06 48.8 5.0 39 162-201 4-45 (269)
455 1lnq_A MTHK channels, potassiu 94.2 0.071 2.4E-06 49.3 6.4 88 165-267 115-206 (336)
456 2j8z_A Quinone oxidoreductase; 94.1 0.08 2.7E-06 49.4 6.7 94 164-273 162-262 (354)
457 3dr3_A N-acetyl-gamma-glutamyl 94.1 0.087 3E-06 49.3 6.7 100 166-274 5-108 (337)
458 1wly_A CAAR, 2-haloacrylate re 94.0 0.075 2.6E-06 49.0 6.2 93 164-272 145-244 (333)
459 2p91_A Enoyl-[acyl-carrier-pro 94.0 0.14 4.6E-06 46.0 7.7 38 162-200 18-58 (285)
460 3u95_A Glycoside hydrolase, fa 94.0 0.15 5.1E-06 50.0 8.5 115 167-285 2-172 (477)
461 2z1m_A GDP-D-mannose dehydrata 93.9 0.061 2.1E-06 49.0 5.3 36 164-200 2-38 (345)
462 1vkn_A N-acetyl-gamma-glutamyl 93.9 0.27 9.3E-06 46.2 9.7 101 164-278 12-113 (351)
463 3q98_A Transcarbamylase; rossm 93.9 0.53 1.8E-05 44.9 11.9 106 162-271 188-333 (399)
464 2zb4_A Prostaglandin reductase 93.9 0.085 2.9E-06 49.1 6.3 92 166-272 162-260 (357)
465 2ejw_A HDH, homoserine dehydro 93.8 0.067 2.3E-06 50.0 5.4 101 167-289 5-116 (332)
466 3k5i_A Phosphoribosyl-aminoimi 93.8 0.061 2.1E-06 51.3 5.3 41 158-200 17-57 (403)
467 3gqv_A Enoyl reductase; medium 93.8 0.26 9.1E-06 46.1 9.6 94 163-272 163-263 (371)
468 1ja9_A 4HNR, 1,3,6,8-tetrahydr 93.8 0.045 1.5E-06 48.4 4.0 37 161-198 17-54 (274)
469 1yb5_A Quinone oxidoreductase; 93.7 0.11 3.9E-06 48.3 7.0 94 164-273 170-270 (351)
470 2wyu_A Enoyl-[acyl carrier pro 93.7 0.052 1.8E-06 48.2 4.3 39 161-200 4-45 (261)
471 3mtj_A Homoserine dehydrogenas 93.7 0.13 4.5E-06 49.9 7.4 107 166-291 11-130 (444)
472 1jvb_A NAD(H)-dependent alcoho 93.6 0.13 4.3E-06 47.8 7.0 95 164-273 170-272 (347)
473 1qsg_A Enoyl-[acyl-carrier-pro 93.6 0.065 2.2E-06 47.6 4.8 37 162-199 6-45 (265)
474 3kzn_A Aotcase, N-acetylornith 93.6 2.9 0.0001 39.2 16.4 149 104-280 152-326 (359)
475 3edm_A Short chain dehydrogena 93.5 0.11 3.8E-06 46.1 6.1 37 162-199 5-43 (259)
476 3gpi_A NAD-dependent epimerase 93.5 0.056 1.9E-06 48.3 4.2 68 164-245 2-72 (286)
477 4eez_A Alcohol dehydrogenase 1 93.5 0.15 5.2E-06 47.0 7.3 38 164-201 163-200 (348)
478 1smk_A Malate dehydrogenase, g 93.5 0.13 4.4E-06 47.8 6.7 103 165-279 8-130 (326)
479 4a2c_A Galactitol-1-phosphate 93.5 0.23 7.9E-06 45.7 8.5 95 163-272 159-260 (346)
480 4fs3_A Enoyl-[acyl-carrier-pro 93.5 0.13 4.5E-06 45.6 6.5 39 162-201 3-44 (256)
481 3sc4_A Short chain dehydrogena 93.4 0.22 7.4E-06 44.8 8.0 39 161-200 5-44 (285)
482 3mw9_A GDH 1, glutamate dehydr 93.4 0.72 2.5E-05 45.2 12.1 115 162-292 241-366 (501)
483 3h5n_A MCCB protein; ubiquitin 93.4 0.15 5.1E-06 47.9 7.1 38 161-199 114-152 (353)
484 4dvj_A Putative zinc-dependent 93.4 0.23 7.8E-06 46.4 8.4 93 164-272 171-270 (363)
485 2x0j_A Malate dehydrogenase; o 93.4 0.25 8.6E-06 45.2 8.4 113 166-283 1-127 (294)
486 1y1p_A ARII, aldehyde reductas 93.3 0.19 6.4E-06 45.6 7.6 82 162-246 8-93 (342)
487 3dhn_A NAD-dependent epimerase 93.3 0.11 3.6E-06 44.6 5.5 100 166-276 5-115 (227)
488 3r3j_A Glutamate dehydrogenase 93.2 0.2 7E-06 48.5 7.7 120 161-292 235-373 (456)
489 1p9l_A Dihydrodipicolinate red 93.2 0.34 1.1E-05 43.2 8.7 28 167-194 2-30 (245)
490 3c8m_A Homoserine dehydrogenas 93.2 0.12 4E-06 48.2 5.9 116 166-290 7-140 (331)
491 1g0o_A Trihydroxynaphthalene r 93.2 0.2 6.8E-06 44.9 7.4 40 161-201 25-65 (283)
492 1o6z_A MDH, malate dehydrogena 93.1 0.45 1.5E-05 43.5 9.8 120 167-294 2-143 (303)
493 4a0s_A Octenoyl-COA reductase/ 93.1 0.27 9.1E-06 47.2 8.6 95 163-273 219-337 (447)
494 2bka_A CC3, TAT-interacting pr 93.0 0.077 2.6E-06 46.0 4.2 75 163-247 16-95 (242)
495 1xgk_A Nitrogen metabolite rep 93.0 0.064 2.2E-06 50.0 3.9 105 164-275 4-115 (352)
496 1xq6_A Unknown protein; struct 93.0 0.17 5.9E-06 43.6 6.5 73 163-246 2-79 (253)
497 1h2b_A Alcohol dehydrogenase; 92.9 0.18 6.3E-06 47.0 6.9 37 164-201 186-223 (359)
498 3dqp_A Oxidoreductase YLBE; al 92.9 0.27 9.2E-06 41.9 7.5 70 167-248 2-75 (219)
499 2ph5_A Homospermidine synthase 92.9 0.076 2.6E-06 51.9 4.3 38 162-200 11-51 (480)
500 2x9g_A PTR1, pteridine reducta 92.8 0.16 5.3E-06 45.7 6.1 39 160-199 18-57 (288)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=2.5e-70 Score=521.51 Aligned_cols=292 Identities=28% Similarity=0.471 Sum_probs=259.6
Q ss_pred CCCCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHh-hccCCceE
Q 020301 12 PNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGKAF 90 (328)
Q Consensus 12 ~~~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~l~~k~i 90 (328)
+++++|||++.++++. ..+.|++. +++++.. .+...+++++.+.+. ++|+++++..+++++++++++ |+| |+|
T Consensus 25 ~~~~~kvlv~~~~~~~-~~~~l~~~-~~v~~~~-~~~~~~~~~l~~~~~-~~d~li~~~~~~i~~~~l~~~~~~L--k~I 98 (345)
T 4g2n_A 25 THPIQKAFLCRRFTPA-IEAELRQR-FDLEVNL-EDTVLTPSGIASRAH-GAEVLFVTATEAITAEVIRKLQPGL--KTI 98 (345)
T ss_dssp --CCCEEEESSCCCHH-HHHHHHHH-SEEEECT-TCCCCCHHHHHHHTT-TCSEEEECTTSCBCHHHHHHTTTTC--CEE
T ss_pred cCCCCEEEEeCCCCHH-HHHHHHcc-CCEEEec-CCCCCCHHHHHHHhc-CCeEEEEeCCCCCCHHHHHhhcCCc--eEE
Confidence 3568999999999875 45777765 5776533 344578899999887 799999987788999999998 676 999
Q ss_pred EEccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEE
Q 020301 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (328)
Q Consensus 91 ~~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgI 170 (328)
++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|.+....|++|+|+|+||
T Consensus 99 ~~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGI 178 (345)
T 4g2n_A 99 ATLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGI 178 (345)
T ss_dssp EESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEE
T ss_pred EEcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988875545689999999999
Q ss_pred EecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhh
Q 020301 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (328)
Q Consensus 171 iG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t 250 (328)
||+|+||+++|+++ ++|||+|++|||++.+.... . +.....++++++++||+|++|+|+|++|
T Consensus 179 IGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~~~-----------~-----g~~~~~~l~ell~~sDvV~l~~Plt~~T 241 (345)
T 4g2n_A 179 FGMGRIGRAIATRA-RGFGLAIHYHNRTRLSHALE-----------E-----GAIYHDTLDSLLGASDIFLIAAPGRPEL 241 (345)
T ss_dssp ESCSHHHHHHHHHH-HTTTCEEEEECSSCCCHHHH-----------T-----TCEECSSHHHHHHTCSEEEECSCCCGGG
T ss_pred EEeChhHHHHHHHH-HHCCCEEEEECCCCcchhhh-----------c-----CCeEeCCHHHHHhhCCEEEEecCCCHHH
Confidence 99999999999997 79999999999986432110 0 1223359999999999999999999999
Q ss_pred hccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 251 ~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++||+.++|||++|||++|||+||+|.
T Consensus 242 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~ 317 (345)
T 4g2n_A 242 KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATH 317 (345)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBH
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCH
Confidence 9999999999999999999999999999999999999999999999999999977789999999999999999985
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=1.1e-69 Score=515.86 Aligned_cols=282 Identities=30% Similarity=0.440 Sum_probs=240.5
Q ss_pred eEEEEeCCCCch-H-HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEc
Q 020301 16 YRVVSTKPMPGT-R-WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (328)
Q Consensus 16 ~~vlv~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~ 93 (328)
||||++...... . +.+.|++.+ +++........+++++. ++|+++++..+++++++++++|+| |+|++.
T Consensus 1 Mkil~~~~~~~~~p~~~e~l~~~~--~~~~~~~~~~~~~~~l~-----~ad~i~v~~~~~i~~~~l~~~p~L--k~I~~~ 71 (334)
T 3kb6_A 1 MNVLFTSVPQEDVPFYQEALKDLS--LKIYTTDVSKVPENELK-----KAELISVFVYDKLTEELLSKMPRL--KLIHTR 71 (334)
T ss_dssp -CEEECSCCTTHHHHHHHHTTTSC--EEECSSCGGGSCHHHHH-----HCSEEEECTTSCBCHHHHHTCTTC--CEEEES
T ss_pred CEEEEeCCCcccCHHHHHHHHhCC--cEEEeCCcccCCHHHhc-----CCCEEEEeCCCCCCHHHHhcCCCC--cEEEEC
Confidence 688887533222 2 334455443 44433332334444443 689999988889999999999987 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~ 173 (328)
|+|+||||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.. ..+++++|+|+||||+
T Consensus 72 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~--~~~~~l~g~tvGIiG~ 149 (334)
T 3kb6_A 72 SVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSE--ILARELNRLTLGVIGT 149 (334)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGG--GCBCCGGGSEEEEECC
T ss_pred CcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccc--cccceecCcEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999866543 4678999999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcc
Q 020301 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (328)
Q Consensus 174 G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~l 253 (328)
|+||+.+|+++ ++|||+|++|||+......+ .+ ..+.+++|++++||||++|||+|++|+||
T Consensus 150 G~IG~~va~~~-~~fg~~v~~~d~~~~~~~~~-----------~~------~~~~~l~ell~~sDivslh~Plt~~T~~l 211 (334)
T 3kb6_A 150 GRIGSRVAMYG-LAFGMKVLCYDVVKREDLKE-----------KG------CVYTSLDELLKESDVISLHVPYTKETHHM 211 (334)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH-----------TT------CEECCHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred chHHHHHHHhh-cccCceeeecCCccchhhhh-----------cC------ceecCHHHHHhhCCEEEEcCCCChhhccC
Confidence 99999999996 89999999999987543211 01 13479999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCC-C---------------CcccCCCeEE
Q 020301 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-P---------------GLSEMKNAIV 317 (328)
Q Consensus 254 i~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~---------------~L~~~~nvil 317 (328)
||++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++||++. + |||++|||++
T Consensus 212 i~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvil 291 (334)
T 3kb6_A 212 INEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVII 291 (334)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEE
T ss_pred cCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEE
Confidence 99999999999999999999999999999999999999999999999999631 2 6899999999
Q ss_pred cCCCCCCCc
Q 020301 318 VPHIASASK 326 (328)
Q Consensus 318 TPHia~~t~ 326 (328)
|||+||+|.
T Consensus 292 TPHia~~T~ 300 (334)
T 3kb6_A 292 TPHIAYYTD 300 (334)
T ss_dssp CCSCTTCBH
T ss_pred CCchhhChH
Confidence 999999985
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1.3e-67 Score=501.05 Aligned_cols=290 Identities=30% Similarity=0.458 Sum_probs=256.9
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEc
Q 020301 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (328)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~ 93 (328)
+++|||++.++++. ..+.|++.+ ++.+. ..+...+++++.+.+. ++|+++++...++++++++++|+| |+|++.
T Consensus 1 m~~kvlv~~~~~~~-~~~~l~~~~-~v~~~-~~~~~~~~~~~~~~~~-~~d~~i~~~~~~i~~~~l~~~~~L--k~I~~~ 74 (330)
T 4e5n_A 1 MLPKLVITHRVHEE-ILQLLAPHC-ELITN-QTDSTLTREEILRRCR-DAQAMMAFMPDRVDADFLQACPEL--RVIGCA 74 (330)
T ss_dssp CCCEEEECSCCCHH-HHHHHTTTC-EEECC-CSSSCCCHHHHHHHHT-TCSEEEECTTCCBCHHHHHHCTTC--CEEEES
T ss_pred CCCEEEEecCCCHH-HHHHHHhCC-eEEEe-cCCCCCCHHHHHHHhC-CCeEEEEeCCCCCCHHHHhhCCCC--cEEEEC
Confidence 36899999999865 467887764 66542 2334568899998887 799999977789999999999987 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~ 173 (328)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|.+ ...|++|+|+|+||||+
T Consensus 75 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~~l~g~tvGIIG~ 153 (330)
T 4e5n_A 75 LKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQP-RFYGTGLDNATVGFLGM 153 (330)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCS-CCCCCCSTTCEEEEECC
T ss_pred CCcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCc-cccCCccCCCEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999988876 34578999999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcc
Q 020301 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (328)
Q Consensus 174 G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~l 253 (328)
|+||+.+|+++ ++|||+|++|||++...... ..+ + . ...++++++++||+|++|+|+|++|+++
T Consensus 154 G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~--~~~-------g-----~-~~~~l~ell~~aDvV~l~~P~t~~t~~l 217 (330)
T 4e5n_A 154 GAIGLAMADRL-QGWGATLQYHEAKALDTQTE--QRL-------G-----L-RQVACSELFASSDFILLALPLNADTLHL 217 (330)
T ss_dssp SHHHHHHHHHT-TTSCCEEEEECSSCCCHHHH--HHH-------T-----E-EECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCCcHhHH--Hhc-------C-----c-eeCCHHHHHhhCCEEEEcCCCCHHHHHH
Confidence 99999999996 89999999999987321110 011 1 1 2358999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCC-------CCC-CCCcccCCCeEEcCCCCCCC
Q 020301 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE-------PYM-KPGLSEMKNAIVVPHIASAS 325 (328)
Q Consensus 254 i~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~E-------P~~-~~~L~~~~nvilTPHia~~t 325 (328)
|+++.|++||+|++|||+|||+++|++||++||++|+|+||+||||++| |++ ++|||++|||++|||+||+|
T Consensus 218 i~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 218 VNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp BCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 9999999999999999999999999999999999999999999999999 964 57999999999999999998
Q ss_pred c
Q 020301 326 K 326 (328)
Q Consensus 326 ~ 326 (328)
.
T Consensus 298 ~ 298 (330)
T 4e5n_A 298 R 298 (330)
T ss_dssp H
T ss_pred H
Confidence 5
No 4
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=4e-67 Score=508.61 Aligned_cols=288 Identities=30% Similarity=0.396 Sum_probs=252.1
Q ss_pred eCCCCCeEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCc
Q 020301 10 WNPNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGK 88 (328)
Q Consensus 10 ~~~~~~~~vlv~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k 88 (328)
+-|++++|||+++++++. ..+.|++.++ +++... ...+++++.+.+. ++|+++++..+++++++++++|+| |
T Consensus 10 ~~~~~~~kIl~~~~i~~~-~~~~l~~~g~~~v~~~~---~~~~~~~l~~~~~-~~d~l~v~~~~~i~~~~l~~~p~L--k 82 (416)
T 3k5p_A 10 SLSRDRINVLLLEGISQT-AVEYFKSSGYTNVTHLP---KALDKADLIKAIS-SAHIIGIRSRTQLTEEIFAAANRL--I 82 (416)
T ss_dssp --CGGGSCEEECSCCCHH-HHHHHHHTTCCCEEECS---SCCCHHHHHHHHT-TCSEEEECSSCCBCHHHHHHCTTC--C
T ss_pred CCCCCCcEEEEECCCCHH-HHHHHHHCCCcEEEECC---CCCCHHHHHHHcc-CCEEEEEcCCCCCCHHHHHhCCCc--E
Confidence 457778999999999864 4678888887 776532 3468899999887 799998888889999999999987 9
Q ss_pred eEEEccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEE
Q 020301 89 AFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTV 168 (328)
Q Consensus 89 ~i~~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tv 168 (328)
+|+++|+|+||||+++|+++||.|+|+||+|+++||||++++||+++|++..+++.+++|.|..+ ...+.+++|||+
T Consensus 83 ~I~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~---~~~~~el~gktv 159 (416)
T 3k5p_A 83 AVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKT---AIGSREVRGKTL 159 (416)
T ss_dssp EEEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC---CTTCCCSTTCEE
T ss_pred EEEECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhccccccc---CCCCccCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999988643 234689999999
Q ss_pred EEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCCh
Q 020301 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (328)
Q Consensus 169 gIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~ 248 (328)
||||+|+||+++|+++ ++|||+|++||++.... ........++++++++||+|++|+|+|+
T Consensus 160 GIIGlG~IG~~vA~~l-~~~G~~V~~yd~~~~~~------------------~~~~~~~~sl~ell~~aDvV~lhvPlt~ 220 (416)
T 3k5p_A 160 GIVGYGNIGSQVGNLA-ESLGMTVRYYDTSDKLQ------------------YGNVKPAASLDELLKTSDVVSLHVPSSK 220 (416)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECTTCCCC------------------BTTBEECSSHHHHHHHCSEEEECCCC--
T ss_pred EEEeeCHHHHHHHHHH-HHCCCEEEEECCcchhc------------------ccCcEecCCHHHHHhhCCEEEEeCCCCH
Confidence 9999999999999996 79999999999875321 0012245799999999999999999999
Q ss_pred hhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCC-----CCcccCCCeEEcCCCCC
Q 020301 249 TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-----PGLSEMKNAIVVPHIAS 323 (328)
Q Consensus 249 ~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-----~~L~~~~nvilTPHia~ 323 (328)
+|+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++||++. +|||++|||++|||+||
T Consensus 221 ~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~ 300 (416)
T 3k5p_A 221 STSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGG 300 (416)
T ss_dssp ---CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTT
T ss_pred HHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999753 58999999999999999
Q ss_pred CCc
Q 020301 324 ASK 326 (328)
Q Consensus 324 ~t~ 326 (328)
+|.
T Consensus 301 ~T~ 303 (416)
T 3k5p_A 301 STE 303 (416)
T ss_dssp CCH
T ss_pred CCH
Confidence 985
No 5
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-67 Score=501.05 Aligned_cols=285 Identities=29% Similarity=0.428 Sum_probs=223.3
Q ss_pred CCCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEE
Q 020301 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (328)
Q Consensus 13 ~~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~ 92 (328)
++++|||++.++++. ..+.|++ ++++..... ..+++++.+.+. ++|+++++..+++++++++++|+| |+|++
T Consensus 28 ~~~~~vl~~~~~~~~-~~~~L~~-~~~v~~~~~---~~~~~~~~~~~~-~~d~li~~~~~~i~~~~l~~~p~L--k~I~~ 99 (340)
T 4dgs_A 28 NVKPDLLLVEPMMPF-VMDELQR-NYSVHRLYQ---AADRPALEAALP-SIRAVATGGGAGLSNEWMEKLPSL--GIIAI 99 (340)
T ss_dssp -----CEECSCCCHH-HHHTHHH-HSCCEETTC---GGGHHHHHHHGG-GCCEEEEETTTCBCHHHHHHCSSC--CEEEE
T ss_pred CCCCEEEEECCCCHH-HHHHHhc-CCcEEEeCC---CCCHHHHHHHhC-CcEEEEEcCCCCCCHHHHhhCCCC--EEEEE
Confidence 467899999999875 4577765 456654321 235778887775 799999987788999999999987 99999
Q ss_pred ccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEe
Q 020301 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (328)
Q Consensus 93 ~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG 172 (328)
.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..+.. ...+++|+|+|+||||
T Consensus 100 ~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~-~~~~~~l~gktiGIIG 178 (340)
T 4dgs_A 100 NGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQ-LPLGHSPKGKRIGVLG 178 (340)
T ss_dssp ESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC-------CCCCCCTTCEEEEEC
T ss_pred CCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccC-cCccccccCCEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999865311 1246899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhc
Q 020301 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (328)
Q Consensus 173 ~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~ 252 (328)
+|+||+.+|+++ ++|||+|++|||++... .......++++++++||+|++|+|+|++|++
T Consensus 179 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~-------------------~~~~~~~sl~ell~~aDvVil~vP~t~~t~~ 238 (340)
T 4dgs_A 179 LGQIGRALASRA-EAFGMSVRYWNRSTLSG-------------------VDWIAHQSPVDLARDSDVLAVCVAASAATQN 238 (340)
T ss_dssp CSHHHHHHHHHH-HTTTCEEEEECSSCCTT-------------------SCCEECSSHHHHHHTCSEEEECC--------
T ss_pred CCHHHHHHHHHH-HHCCCEEEEEcCCcccc-------------------cCceecCCHHHHHhcCCEEEEeCCCCHHHHH
Confidence 999999999997 79999999999986431 1122346999999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 253 li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
+++++.|+.||+|++|||+|||++||++||++||++|+|+||+||||++||++++|||++|||++|||+||+|.
T Consensus 239 li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~ 312 (340)
T 4dgs_A 239 IVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATV 312 (340)
T ss_dssp --CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCH
T ss_pred HhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCH
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999985
No 6
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=2.7e-66 Score=503.77 Aligned_cols=286 Identities=26% Similarity=0.364 Sum_probs=246.4
Q ss_pred CCCCeEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceE
Q 020301 12 PNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAF 90 (328)
Q Consensus 12 ~~~~~~vlv~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i 90 (328)
|+++|||++++++++. ..+.|++.++ ++++.. ...+++++.+.+. ++|++++++.+++++++++++|+| |+|
T Consensus 1 ~~~~~kil~~~~~~~~-~~~~l~~~~~~~v~~~~---~~~~~~~l~~~~~-~~d~l~~~~~~~~~~~~l~~~~~L--k~I 73 (404)
T 1sc6_A 1 EKDKIKFLLVEGVHQK-ALESLRAAGYTNIEFHK---GALDDEQLKESIR-DAHFIGLRSRTHLTEDVINAAEKL--VAI 73 (404)
T ss_dssp CCSSCCEEECSCCCHH-HHHHHHHTTCCCEEECS---SCCCHHHHHHHTT-SCSEEEECSSCCBCHHHHHHCSSC--CEE
T ss_pred CCCceEEEEeCCCCHH-HHHHHHhCCCcEEEEcC---CCCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--cEE
Confidence 4567899999888754 4678887777 676532 2467899988887 799999888789999999999987 999
Q ss_pred EEccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEE
Q 020301 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (328)
Q Consensus 91 ~~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgI 170 (328)
+++|+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++.+++.+++|.|..+ .+.+.+++|||+||
T Consensus 74 ~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~---~~~~~el~gktlGi 150 (404)
T 1sc6_A 74 GAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKL---AAGSFEARGKKLGI 150 (404)
T ss_dssp EECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC--------CCCSTTCEEEE
T ss_pred EECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCcccc---CCCccccCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999999988533 23578999999999
Q ss_pred EecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhh
Q 020301 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (328)
Q Consensus 171 iG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t 250 (328)
||+|+||+.+|+++ ++|||+|++|||+.... .+ ......++++++++||+|++|+|+|++|
T Consensus 151 IGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~--------------~~----~~~~~~~l~ell~~aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 151 IGYGHIGTQLGILA-ESLGMYVYFYDIENKLP--------------LG----NATQVQHLSDLLNMSDVVSLHVPENPST 211 (404)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCCC--------------CT----TCEECSCHHHHHHHCSEEEECCCSSTTT
T ss_pred EeECHHHHHHHHHH-HHCCCEEEEEcCCchhc--------------cC----CceecCCHHHHHhcCCEEEEccCCChHH
Confidence 99999999999996 79999999999975321 01 1223458999999999999999999999
Q ss_pred hccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-----CCCcccCCCeEEcCCCCCCC
Q 020301 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-----KPGLSEMKNAIVVPHIASAS 325 (328)
Q Consensus 251 ~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-----~~~L~~~~nvilTPHia~~t 325 (328)
+++|+++.|++||+|++|||+|||+++|++||++||++|+++||+||||++||++ ++|||++|||++|||+|++|
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T 291 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGST 291 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCS
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999975 36999999999999999998
Q ss_pred c
Q 020301 326 K 326 (328)
Q Consensus 326 ~ 326 (328)
.
T Consensus 292 ~ 292 (404)
T 1sc6_A 292 Q 292 (404)
T ss_dssp H
T ss_pred H
Confidence 5
No 7
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=3.1e-66 Score=489.46 Aligned_cols=280 Identities=23% Similarity=0.268 Sum_probs=244.6
Q ss_pred CCeEEEEeCCCCchHHHHHH-HhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEE
Q 020301 14 GKYRVVSTKPMPGTRWINLL-IEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (328)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~ 92 (328)
++|||+++.+..+ .|.+.| ++..+++++.... +++++.+.+. ++|++++.. ++++++++++|+| |+|++
T Consensus 4 ~~mkili~~~~~~-~~~~~L~~~~~p~~~~~~~~----~~~~~~~~~~-~ad~li~~~--~~~~~~l~~~~~L--k~I~~ 73 (324)
T 3hg7_A 4 SQRTLLLLSQDNA-HYERLLKAAHLPHLRILRAD----NQSDAEKLIG-EAHILMAEP--ARAKPLLAKANKL--SWFQS 73 (324)
T ss_dssp CCEEEEEESTTHH-HHHHHHHHSCCTTEEEEECS----SHHHHHHHGG-GCSEEEECH--HHHGGGGGGCTTC--CEEEE
T ss_pred cccEEEEecCCCH-HHHHHHhhccCCCeEEEeCC----ChhHHHHHhC-CCEEEEECC--CCCHHHHhhCCCc--eEEEE
Confidence 4599999999875 578889 6666677665432 4677777787 799999853 4567788889987 99999
Q ss_pred ccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEe
Q 020301 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (328)
Q Consensus 93 ~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG 172 (328)
.|+|+|+||++++++ ||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..+ .+.+++|+|+||||
T Consensus 74 ~~~G~d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~tvGIIG 147 (324)
T 3hg7_A 74 TYAGVDVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH-----PYQGLKGRTLLILG 147 (324)
T ss_dssp SSSCCGGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTCEEEEEC
T ss_pred CCCCCCccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC-----CCcccccceEEEEE
Confidence 999999999998764 999999999999999999999999999999999999999987642 35799999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhc
Q 020301 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (328)
Q Consensus 173 ~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~ 252 (328)
+|.||+++|+++ ++|||+|++|||++.... .. .......++++++++||+|++|+|+|++|++
T Consensus 148 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~~--~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~ 210 (324)
T 3hg7_A 148 TGSIGQHIAHTG-KHFGMKVLGVSRSGRERA--------------GF--DQVYQLPALNKMLAQADVIVSVLPATRETHH 210 (324)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCCCT--------------TC--SEEECGGGHHHHHHTCSEEEECCCCCSSSTT
T ss_pred ECHHHHHHHHHH-HhCCCEEEEEcCChHHhh--------------hh--hcccccCCHHHHHhhCCEEEEeCCCCHHHHH
Confidence 999999999997 799999999999864210 00 0112346899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEEcCCCCCCCc
Q 020301 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 253 li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~ 326 (328)
+|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++||++ ++|||++|||++|||+||+|.
T Consensus 211 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~ 285 (324)
T 3hg7_A 211 LFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSF 285 (324)
T ss_dssp SBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCC
T ss_pred HhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccH
Confidence 99999999999999999999999999999999999999999999999999975 579999999999999999985
No 8
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=4e-66 Score=492.16 Aligned_cols=286 Identities=28% Similarity=0.428 Sum_probs=243.6
Q ss_pred CeEEEEeCCCCc-hHHHHH-HHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHH-HHHHhhccCCceEE
Q 020301 15 KYRVVSTKPMPG-TRWINL-LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGET-LFAALSRAGGKAFS 91 (328)
Q Consensus 15 ~~~vlv~~~~~~-~~~~~~-l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~-~l~~~~~l~~k~i~ 91 (328)
+|||++....+. ..+.+. +++.++++..... ..+ +++.+.+. ++|+++++...+++++ +++++|+.++|+|+
T Consensus 1 Mmki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~-~~~~~~~~-~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~ 75 (343)
T 2yq5_A 1 MTKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQ---ALT-SATVDLAE-GCSSVSLKPLGPVDEEVVYQKLSEYGVKCIG 75 (343)
T ss_dssp -CEEEEESCCGGGHHHHHHHHHHHTCEEEEESS---CCS-TTGGGGGT-TCSEEEECCSSCBCCHHHHHHHHHTTCCEEE
T ss_pred CceEEEEecCcccHHHHHHHHHhCCeEEEECCC---CCC-HHHHHHhc-CCcEEEEcCCCCcCHHHHHHhccccCceEEE
Confidence 378888764332 223333 4456777765432 223 45666676 7999999877899999 99999875669999
Q ss_pred EccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHH-cCCCCCCCCCcccccccCCCEEEE
Q 020301 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMR-AGLYDGWLPNLFVGNLLKGQTVGV 170 (328)
Q Consensus 92 ~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~-~g~w~~w~~~~~~~~~l~g~tvgI 170 (328)
+.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.++ +|.|. |.. ...+++|+|+|+||
T Consensus 76 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~-w~~-~~~~~~l~gktvgI 153 (343)
T 2yq5_A 76 LRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFT-WPS-NLISNEIYNLTVGL 153 (343)
T ss_dssp ESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCC-CCG-GGCBCCGGGSEEEE
T ss_pred ECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcc-ccc-CCCccccCCCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999 99885 753 24678999999999
Q ss_pred EecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhh
Q 020301 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (328)
Q Consensus 171 iG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t 250 (328)
||+|+||+++|+++ ++|||+|++|||+..+..+ .+ ....++++++++||+|++|+|+|++|
T Consensus 154 iGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~------------~~------~~~~~l~ell~~aDvV~l~~Plt~~t 214 (343)
T 2yq5_A 154 IGVGHIGSAVAEIF-SAMGAKVIAYDVAYNPEFE------------PF------LTYTDFDTVLKEADIVSLHTPLFPST 214 (343)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCGGGT------------TT------CEECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EecCHHHHHHHHHH-hhCCCEEEEECCChhhhhh------------cc------ccccCHHHHHhcCCEEEEcCCCCHHH
Confidence 99999999999996 7999999999998754111 01 12359999999999999999999999
Q ss_pred hccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCC--CCC------------CCcccCCCeE
Q 020301 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP--YMK------------PGLSEMKNAI 316 (328)
Q Consensus 251 ~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP--~~~------------~~L~~~~nvi 316 (328)
+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++|| ++. +|||++|||+
T Consensus 215 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvi 294 (343)
T 2yq5_A 215 ENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVV 294 (343)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEE
T ss_pred HHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999 333 2799999999
Q ss_pred EcCCCCCCCc
Q 020301 317 VVPHIASASK 326 (328)
Q Consensus 317 lTPHia~~t~ 326 (328)
+|||+||+|.
T Consensus 295 lTPHia~~t~ 304 (343)
T 2yq5_A 295 ITPHSAFYTE 304 (343)
T ss_dssp ECSSCTTCBH
T ss_pred ECCccccchH
Confidence 9999999985
No 9
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=2.6e-65 Score=488.20 Aligned_cols=289 Identities=21% Similarity=0.256 Sum_probs=246.4
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCC--CCccHHHHHHhhccCCceEEEc
Q 020301 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLT--EDWGETLFAALSRAGGKAFSNM 93 (328)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~--~~~~~~~l~~~~~l~~k~i~~~ 93 (328)
+++|-...... .+.+.|++.|+++.+..... .+.+++.+.+. ++|+++++.. .++++++++++|+| |+|++.
T Consensus 20 ~~~lg~~~~~l-~~~~~L~~~g~ev~~~~~~~--~~~~~~~~~~~-~ad~li~~~~~~~~~~~~~l~~~p~L--k~i~~~ 93 (351)
T 3jtm_A 20 PNFLGCVENAL-GIRDWLESQGHQYIVTDDKE--GPDCELEKHIP-DLHVLISTPFHPAYVTAERIKKAKNL--KLLLTA 93 (351)
T ss_dssp TTCCSSTTTGG-GCHHHHHHTTCEEEEESCCS--STTSHHHHHTT-TCSEEEECTTSCCCBCHHHHHHCSSC--CEEEES
T ss_pred CCEEEeccchH-HHHHHHHHCCCEEEEeCCCC--CCHHHHHHHhC-CCEEEEEccCCCCCCCHHHHhhCCCC--eEEEEe
Confidence 34444443322 34678888899987654432 25568888887 7999998643 46899999999987 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~ 173 (328)
|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|++..+++.+++|.|... .....+.+|+|+|+||||+
T Consensus 94 g~G~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~-~~~~~~~~l~gktvGIIG~ 172 (351)
T 3jtm_A 94 GIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVA-GIAYRAYDLEGKTIGTVGA 172 (351)
T ss_dssp SSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHH-HHHTTCCCSTTCEEEEECC
T ss_pred CeeecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccc-cccCCcccccCCEEeEEEe
Confidence 999999999999999999999999999999999999999999999999999999988521 1112367899999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcc
Q 020301 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (328)
Q Consensus 174 G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~l 253 (328)
|+||+++|+++ ++|||+|++||+++.+... .. ..+ .....++++++++||+|++|+|+|++|+++
T Consensus 173 G~IG~~vA~~l-~~~G~~V~~~dr~~~~~~~--~~-------~~g-----~~~~~~l~ell~~aDvV~l~~Plt~~t~~l 237 (351)
T 3jtm_A 173 GRIGKLLLQRL-KPFGCNLLYHDRLQMAPEL--EK-------ETG-----AKFVEDLNEMLPKCDVIVINMPLTEKTRGM 237 (351)
T ss_dssp SHHHHHHHHHH-GGGCCEEEEECSSCCCHHH--HH-------HHC-----CEECSCHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEeCCCccCHHH--HH-------hCC-----CeEcCCHHHHHhcCCEEEECCCCCHHHHHh
Confidence 99999999997 7999999999998632111 01 111 223468999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEEcCCCCCCCc
Q 020301 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 254 i~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~ 326 (328)
|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++||++ ++|||++|||++|||+||+|.
T Consensus 238 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ 311 (351)
T 3jtm_A 238 FNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTI 311 (351)
T ss_dssp BSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSH
T ss_pred hcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCH
Confidence 9999999999999999999999999999999999999999999999999975 479999999999999999985
No 10
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=8.3e-65 Score=485.15 Aligned_cols=288 Identities=27% Similarity=0.421 Sum_probs=248.5
Q ss_pred CeEEEEeCCCCchH----HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEe-cCCCCccHHHHHHhhccCCce
Q 020301 15 KYRVVSTKPMPGTR----WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIG-QLTEDWGETLFAALSRAGGKA 89 (328)
Q Consensus 15 ~~~vlv~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~-~~~~~~~~~~l~~~~~l~~k~ 89 (328)
+|||++.+.+.... ..+.|+ +++++++.. ...+++++.+.+. ++|++++ +...++++++++++|+| |+
T Consensus 2 smki~~~d~~~~~~~~~~~~~~l~--~~~v~~~~~--~~~~~~~l~~~~~-~ad~li~~~~~~~~~~~~l~~~~~L--k~ 74 (352)
T 3gg9_A 2 SLKIAVLDDYQDAVRKLDCFSLLQ--DHEVKVFNN--TVKGVGQLAARVA-DVEALVLIRERTRVTRQLLDRLPKL--KI 74 (352)
T ss_dssp CCEEEECCCTTCCGGGSGGGGGGT--TSEEEECCS--CCCSHHHHHHHTT-TCSEEEECTTSSCBCHHHHTTCTTC--CE
T ss_pred ceEEEEEcCccccchhhhhhhhhc--CceEEEecC--CCCCHHHHHHHhc-CCeEEEEeCCCCCCCHHHHhhCCCC--eE
Confidence 48999988765421 113343 467776432 2346788988887 7999998 56678999999999987 99
Q ss_pred EEEccccC----CccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCC-------CCCCcc
Q 020301 90 FSNMAVGY----NNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDG-------WLPNLF 158 (328)
Q Consensus 90 i~~~g~G~----d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~-------w~~~~~ 158 (328)
|++.|+|+ |+||+++|+++||.|+|+||+ +.+||||++++||++.|++..+++.+++|.|.. |.+...
T Consensus 75 I~~~g~G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~ 153 (352)
T 3gg9_A 75 ISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFG 153 (352)
T ss_dssp EEESSCCCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTT
T ss_pred EEEeCcccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccc
Confidence 99999999 999999999999999999999 999999999999999999999999999999964 433334
Q ss_pred cccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCC
Q 020301 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (328)
Q Consensus 159 ~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (328)
.+++|.|+|+||||+|.||+++|+++ ++|||+|++|||+...... ...| .....++++++++||
T Consensus 154 ~~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~----------~~~g-----~~~~~~l~ell~~aD 217 (352)
T 3gg9_A 154 IGRVLKGQTLGIFGYGKIGQLVAGYG-RAFGMNVLVWGRENSKERA----------RADG-----FAVAESKDALFEQSD 217 (352)
T ss_dssp SBCCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSHHHHHHH----------HHTT-----CEECSSHHHHHHHCS
T ss_pred cCccCCCCEEEEEeECHHHHHHHHHH-HhCCCEEEEECCCCCHHHH----------HhcC-----ceEeCCHHHHHhhCC
Confidence 57899999999999999999999996 7999999999998633111 1112 223359999999999
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEE
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIV 317 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvil 317 (328)
+|++|+|+|++|+++|+++.|++||+|++|||+|||+++|++||++||++|+|+||+||||++||++ ++|||++|||++
T Consensus 218 iV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvil 297 (352)
T 3gg9_A 218 VLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCIC 297 (352)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEE
T ss_pred EEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999985 579999999999
Q ss_pred cCCCCCCCc
Q 020301 318 VPHIASASK 326 (328)
Q Consensus 318 TPHia~~t~ 326 (328)
|||+||+|.
T Consensus 298 TPHia~~t~ 306 (352)
T 3gg9_A 298 TPHIGYVER 306 (352)
T ss_dssp CCSCTTCBH
T ss_pred CCCCCCCCH
Confidence 999999985
No 11
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=1.4e-65 Score=485.45 Aligned_cols=279 Identities=20% Similarity=0.246 Sum_probs=240.2
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHH-HHhhccCCceEEEc
Q 020301 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLF-AALSRAGGKAFSNM 93 (328)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l-~~~~~l~~k~i~~~ 93 (328)
+||||++.++++. +.+.|++.++++++....+ .+.++ +. ++|+++++.. ++ ++++ +++|+| |+|++.
T Consensus 1 m~kil~~~~~~~~-~~~~L~~~~~~~~~~~~~~--~~~~~----~~-~ad~l~~~~~-~~-~~~l~~~~~~L--k~I~~~ 68 (324)
T 3evt_A 1 MSLVLMAQATKPE-QLQQLQTTYPDWTFKDAAA--VTAAD----YD-QIEVMYGNHP-LL-KTILARPTNQL--KFVQVI 68 (324)
T ss_dssp -CEEEECSCCCHH-HHHHHHHHCTTCEEEETTS--CCTTT----GG-GEEEEESCCT-HH-HHHHHSTTCCC--CEEECS
T ss_pred CcEEEEecCCCHH-HHHHHHhhCCCeEEecCCc--cChHH----hC-CcEEEEECCc-Ch-HHHHHhhCCCc--eEEEEC
Confidence 3799999999874 6788888776555443221 23333 33 6898887643 46 8888 678987 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHH-HHHHHcCCCCCCCCCcccccccCCCEEEEEe
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA-DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~-~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG 172 (328)
|+|+|+||+++++++||.|+|+||+++.+||||++++||+++|++..+ ++.+++|.|.... .+++++|+|+||||
T Consensus 69 ~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~----~~~~l~gktvGIiG 144 (324)
T 3evt_A 69 SAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM----TTSTLTGQQLLIYG 144 (324)
T ss_dssp SSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS----CCCCSTTCEEEEEC
T ss_pred CccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC----CCccccCCeEEEEC
Confidence 999999999999999999999999999999999999999999999999 9999999876421 46899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhc
Q 020301 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (328)
Q Consensus 173 ~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~ 252 (328)
+|.||+++|+++ ++|||+|++|||+..... ... ......++++++++||+|++|+|+|++|++
T Consensus 145 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~~~--~~~~~~~l~ell~~aDvV~l~lPlt~~t~~ 207 (324)
T 3evt_A 145 TGQIGQSLAAKA-SALGMHVIGVNTTGHPAD--------------HFH--ETVAFTATADALATANFIVNALPLTPTTHH 207 (324)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEEESSCCCCT--------------TCS--EEEEGGGCHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HhCCCEEEEECCCcchhH--------------hHh--hccccCCHHHHHhhCCEEEEcCCCchHHHH
Confidence 999999999997 799999999999864310 000 012346899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEEcCCCCCCCc
Q 020301 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 253 li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~ 326 (328)
+|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++||++ ++|||++|||++|||+||+|.
T Consensus 208 li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~ 282 (324)
T 3evt_A 208 LFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIA 282 (324)
T ss_dssp CBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCC
T ss_pred hcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChH
Confidence 99999999999999999999999999999999999999999999999999976 579999999999999999985
No 12
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=4.8e-65 Score=483.99 Aligned_cols=283 Identities=30% Similarity=0.414 Sum_probs=242.8
Q ss_pred eEEEEeCCCCch-HHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEcc
Q 020301 16 YRVVSTKPMPGT-RWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (328)
Q Consensus 16 ~~vlv~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g 94 (328)
|||++...-+.+ .+.+.+.+ .+++++... . ..+|+.+.+. ++|+++++...++++++++++|+| |+|++.|
T Consensus 1 Mki~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~-~~~e~~~~~~-~~d~li~~~~~~i~~~~l~~~~~L--k~I~~~~ 72 (334)
T 2pi1_A 1 MNVLFTSVPQEDVPFYQEALK-DLSLKIYTT---D-VSKVPENELK-KAELISVFVYDKLTEELLSKMPRL--KLIHTRS 72 (334)
T ss_dssp CEEEECSCCTTHHHHHHHHTT-TSEEEECSS---C-GGGSCHHHHH-HCSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CEEEEEccChhhHHHHHHHhh-cCCEEEECC---C-CcHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEECC
Confidence 577775544332 24444433 346665321 1 2356677776 799999987789999999999987 9999999
Q ss_pred ccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC
Q 020301 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (328)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G 174 (328)
+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. |.. ...+++|+|+|+||||+|
T Consensus 73 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~tvgIiG~G 150 (334)
T 2pi1_A 73 VGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFS-QDS-EILARELNRLTLGVIGTG 150 (334)
T ss_dssp SCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCG-GGCBCCGGGSEEEEECCS
T ss_pred ccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCc-ccc-CccceeccCceEEEECcC
Confidence 999999999999999999999999999999999999999999999999999999985 431 235789999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccc
Q 020301 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (328)
Q Consensus 175 ~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li 254 (328)
+||+++|+++ ++|||+|++|||+.....++ .+ . ...++++++++||+|++|+|+|++|+++|
T Consensus 151 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~-----------~g-----~-~~~~l~ell~~aDvV~l~~P~t~~t~~li 212 (334)
T 2pi1_A 151 RIGSRVAMYG-LAFGMKVLCYDVVKREDLKE-----------KG-----C-VYTSLDELLKESDVISLHVPYTKETHHMI 212 (334)
T ss_dssp HHHHHHHHHH-HHTTCEEEEECSSCCHHHHH-----------TT-----C-EECCHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred HHHHHHHHHH-HHCcCEEEEECCCcchhhHh-----------cC-----c-eecCHHHHHhhCCEEEEeCCCChHHHHhh
Confidence 9999999997 79999999999987643211 11 1 23579999999999999999999999999
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCC----------------CCCCcccCCCeEEc
Q 020301 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY----------------MKPGLSEMKNAIVV 318 (328)
Q Consensus 255 ~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~----------------~~~~L~~~~nvilT 318 (328)
+++.|++||+|++|||+|||+++|++||++||++|+|+||+||||++||+ .++|||++|||++|
T Consensus 213 ~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilT 292 (334)
T 2pi1_A 213 NEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIIT 292 (334)
T ss_dssp CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEEC
T ss_pred CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEEC
Confidence 99999999999999999999999999999999999999999999999997 24689999999999
Q ss_pred CCCCCCCc
Q 020301 319 PHIASASK 326 (328)
Q Consensus 319 PHia~~t~ 326 (328)
||+||+|.
T Consensus 293 PHia~~t~ 300 (334)
T 2pi1_A 293 PHIAYYTD 300 (334)
T ss_dssp CSCTTCBH
T ss_pred CccccChH
Confidence 99999985
No 13
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-63 Score=470.52 Aligned_cols=286 Identities=30% Similarity=0.464 Sum_probs=250.8
Q ss_pred CCCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEE
Q 020301 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (328)
Q Consensus 13 ~~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~ 92 (328)
.+++||+++.++++. ..+.|++.++++.... ..+++++.+.+. ++|+++++...++++++++++|+| |+|++
T Consensus 24 ~~~~~vli~~~~~~~-~~~~l~~~~~~v~~~~----~~~~~~~~~~~~-~~d~li~~~~~~~~~~~l~~~~~L--k~I~~ 95 (335)
T 2g76_A 24 ANLRKVLISDSLDPC-CRKILQDGGLQVVEKQ----NLSKEELIAELQ-DCEGLIVRSATKVTADVINAAEKL--QVVGR 95 (335)
T ss_dssp --CCEEEECSCCCHH-HHHHHHHHTCEEEECC----SCCHHHHHHHGG-GCSEEEECSSSCBCHHHHHHCSSC--CEEEE
T ss_pred ccceEEEEcCCCCHH-HHHHHHhCCCEEEECC----CCCHHHHHHHhc-CceEEEEcCCCCCCHHHHhhCCCC--cEEEE
Confidence 345689998887653 4677777677765422 246788888887 799999887778999999999987 99999
Q ss_pred ccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEe
Q 020301 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (328)
Q Consensus 93 ~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG 172 (328)
.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ....+.++.|+|+||||
T Consensus 96 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~---~~~~~~~l~g~tvgIIG 172 (335)
T 2g76_A 96 AGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWER---KKFMGTELNGKTLGILG 172 (335)
T ss_dssp SSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCT---GGGCBCCCTTCEEEEEC
T ss_pred CCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCc---cCCCCcCCCcCEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999998752 22356899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhc
Q 020301 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (328)
Q Consensus 173 ~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~ 252 (328)
+|.||+.+|+++ ++|||+|++|||+..+... . ..|. ...++++++++||+|++|+|++++|++
T Consensus 173 lG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~---~-------~~g~------~~~~l~ell~~aDvV~l~~P~t~~t~~ 235 (335)
T 2g76_A 173 LGRIGREVATRM-QSFGMKTIGYDPIISPEVS---A-------SFGV------QQLPLEEIWPLCDFITVHTPLLPSTTG 235 (335)
T ss_dssp CSHHHHHHHHHH-HTTTCEEEEECSSSCHHHH---H-------HTTC------EECCHHHHGGGCSEEEECCCCCTTTTT
T ss_pred ECHHHHHHHHHH-HHCCCEEEEECCCcchhhh---h-------hcCc------eeCCHHHHHhcCCEEEEecCCCHHHHH
Confidence 999999999996 7999999999998754211 1 1121 125899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 253 li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
+|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||.+++|||++|||++|||+|++|.
T Consensus 236 li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~ 309 (335)
T 2g76_A 236 LLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTK 309 (335)
T ss_dssp SBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBH
T ss_pred hhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCH
Confidence 99999999999999999999999999999999999999999999999999977789999999999999999985
No 14
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=8.5e-64 Score=479.25 Aligned_cols=285 Identities=23% Similarity=0.337 Sum_probs=233.9
Q ss_pred CCeEEEEeCCCCc-------hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccC
Q 020301 14 GKYRVVSTKPMPG-------TRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAG 86 (328)
Q Consensus 14 ~~~~vlv~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~ 86 (328)
+.+++++..+.+. +...+.|++. +++.... ..+++++.+.+..++++++.. .++++++++++|+|
T Consensus 26 ~~r~ivll~~~~~~~~~~~~~~~~~~L~~~-~~v~~~~----~~~~~e~~~~~~~~~~~i~~~--~~i~~~~l~~~p~L- 97 (365)
T 4hy3_A 26 TERPLAISAPEPRSLDLIFSDEARAALHSK-YEIVEAD----PENIAGLGDDILGRARYIIGQ--PPLSAETLARMPAL- 97 (365)
T ss_dssp --CCEEEEECTTSCHHHHCCHHHHHHHHHH-SEEEECC----GGGGGGSCTTHHHHEEEEEEC--CCCCHHHHTTCTTC-
T ss_pred CCCCEEEEcCCcccccccCCHHHHHHHhCC-cEEEECC----CCChHHHHHHhhCCeEEEEeC--CCCCHHHHhhCCCC-
Confidence 4456666665533 2235667765 5665321 223445443322257777743 58999999999988
Q ss_pred CceEEEc-cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCC-cccccccC
Q 020301 87 GKAFSNM-AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPN-LFVGNLLK 164 (328)
Q Consensus 87 ~k~i~~~-g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~-~~~~~~l~ 164 (328)
|+|++. |+|||+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. |... ...+.+++
T Consensus 98 -k~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~-w~~~~~~~~~~l~ 175 (365)
T 4hy3_A 98 -RSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTEL-WGGEGNASARLIA 175 (365)
T ss_dssp -CEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCC-CSSSSTTSCCCSS
T ss_pred -eEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCcc-ccccccccccccC
Confidence 999975 8999999999999999999999999999999999999999999999999999999974 6532 23578999
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
|+|+||||+|+||+.+|+++ ++|||+|++|||+...... ...|. ...++++++++||+|++|+
T Consensus 176 gktvGIIGlG~IG~~vA~~l-~~fG~~V~~~d~~~~~~~~----------~~~g~------~~~~l~ell~~aDvV~l~~ 238 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVL-SGFRARIRVFDPWLPRSML----------EENGV------EPASLEDVLTKSDFIFVVA 238 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHH-TTSCCEEEEECSSSCHHHH----------HHTTC------EECCHHHHHHSCSEEEECS
T ss_pred CCEEEEecCCcccHHHHHhh-hhCCCEEEEECCCCCHHHH----------hhcCe------eeCCHHHHHhcCCEEEEcC
Confidence 99999999999999999996 8999999999998643211 11121 2368999999999999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEEcCCCCC
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIAS 323 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~ 323 (328)
|+|++|+++|+++.|++||+|++|||+|||++||++||++||++|+|+ ||||||++||++ ++|||++|||++|||+||
T Consensus 239 Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~ 317 (365)
T 4hy3_A 239 AVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAG 317 (365)
T ss_dssp CSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSS
T ss_pred cCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCcccc
Confidence 999999999999999999999999999999999999999999999998 999999999975 579999999999999999
Q ss_pred CCc
Q 020301 324 ASK 326 (328)
Q Consensus 324 ~t~ 326 (328)
+|.
T Consensus 318 ~t~ 320 (365)
T 4hy3_A 318 ALD 320 (365)
T ss_dssp CCH
T ss_pred CHH
Confidence 985
No 15
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=5.5e-63 Score=469.82 Aligned_cols=285 Identities=21% Similarity=0.325 Sum_probs=242.8
Q ss_pred eEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEE
Q 020301 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (328)
Q Consensus 16 ~~vlv~~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~ 92 (328)
|||++.. +.. ..+.+.|.+ .++++..... ..+++++.+.+. ++|+++++...++++++++++|+.++|+|++
T Consensus 1 mki~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 75 (331)
T 1xdw_A 1 MKVLCYGVRDVE-LPIFEACNKEFGYDIKCVPD---YLNTKETAEMAA-GFDAVILRGNCFANKQNLDIYKKLGVKYILT 75 (331)
T ss_dssp CEEEECSCCTTT-HHHHHHHGGGTCCEEEECSC---CSCSHHHHHTTT-TCSEEEECTTCCBCHHHHHHHHHHTCCEEEE
T ss_pred CEEEEEecCccC-HHHHHHHHHhcCeEEEECCC---CCCHHHHHHHhc-CCeEEEEeCCCCCCHHHHhhCcccCceEEEE
Confidence 5788754 333 335566654 4555554221 234477777776 7999999877789999999999844599999
Q ss_pred ccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEe
Q 020301 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (328)
Q Consensus 93 ~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG 172 (328)
.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. |.. ...+.++.|+|+||||
T Consensus 76 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG 153 (331)
T 1xdw_A 76 RTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFK-VDA-FMFSKEVRNCTVGVVG 153 (331)
T ss_dssp SSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCS-TTCCCCGGGSEEEEEC
T ss_pred ccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCc-ccc-CcCccCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999985 622 2356899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhc
Q 020301 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (328)
Q Consensus 173 ~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~ 252 (328)
+|.||+.+|+++ ++|||+|++||++..... .. . ....++++++++||+|++|+|+|++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~----------------~~-~-~~~~~l~ell~~aDvV~~~~p~t~~t~~ 214 (331)
T 1xdw_A 154 LGRIGRVAAQIF-HGMGATVIGEDVFEIKGI----------------ED-Y-CTQVSLDEVLEKSDIITIHAPYIKENGA 214 (331)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCCSC----------------TT-T-CEECCHHHHHHHCSEEEECCCCCTTTCC
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCccHHH----------------Hh-c-cccCCHHHHHhhCCEEEEecCCchHHHH
Confidence 999999999996 799999999999865310 00 0 1235899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCC--C--------CC----CcccC-CCeEE
Q 020301 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--M--------KP----GLSEM-KNAIV 317 (328)
Q Consensus 253 li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~--~--------~~----~L~~~-~nvil 317 (328)
+|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++||+ + ++ |||++ |||++
T Consensus 215 li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvil 294 (331)
T 1xdw_A 215 VVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLI 294 (331)
T ss_dssp SBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEE
T ss_pred HhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999994 1 12 79999 99999
Q ss_pred cCCCCCCCc
Q 020301 318 VPHIASASK 326 (328)
Q Consensus 318 TPHia~~t~ 326 (328)
|||+||+|.
T Consensus 295 TPHia~~t~ 303 (331)
T 1xdw_A 295 TPHLGSYTD 303 (331)
T ss_dssp CCSCTTCSH
T ss_pred cCccccChH
Confidence 999999985
No 16
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.9e-62 Score=461.32 Aligned_cols=289 Identities=29% Similarity=0.502 Sum_probs=252.0
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhc-cCCceEEEcc
Q 020301 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSR-AGGKAFSNMA 94 (328)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~-l~~k~i~~~g 94 (328)
+||+++.++++. ..+.|++ .+++++... +...+++++.+.+. ++|+++++..+++++++++++|+ | |+|++.|
T Consensus 2 ~~vl~~~~~~~~-~~~~l~~-~~~~~~~~~-~~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~L--k~I~~~~ 75 (320)
T 1gdh_A 2 KKILITWPLPEA-AMARARE-SYDVIAHGD-DPKITIDEMIETAK-SVDALLITLNEKCRKEVIDRIPENI--KCISTYS 75 (320)
T ss_dssp CEEEESSCCCHH-HHHHHHT-TSEEEECCS-TTCCCHHHHHHHHT-TCSEEEEETTSCBCHHHHHHSCTTC--CEEEEES
T ss_pred cEEEEcCCCCHH-HHHHHHh-cCCEEEecC-CCCCCHHHHHHHhc-CCEEEEECCCCCCCHHHHHhCCccc--eEEEECC
Confidence 578888887654 4567765 356665332 22357888888887 79999988767899999999998 6 9999999
Q ss_pred ccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC
Q 020301 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (328)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G 174 (328)
+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.+....+.++.|+|+||||+|
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G 155 (320)
T 1gdh_A 76 IGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFG 155 (320)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCS
T ss_pred cccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999766543345789999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC-CchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcc
Q 020301 175 RIGSAYARMMVEGFKMNLIYYDL-YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (328)
Q Consensus 175 ~IG~~vA~~l~~~fg~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~l 253 (328)
+||+++|+++ ++|||+|++||+ +...... ..+ +. ....++++++++||+|++|+|++++|+++
T Consensus 156 ~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~---~~~-------g~-----~~~~~l~ell~~aDvVil~~p~~~~t~~~ 219 (320)
T 1gdh_A 156 SIGQALAKRA-QGFDMDIDYFDTHRASSSDE---ASY-------QA-----TFHDSLDSLLSVSQFFSLNAPSTPETRYF 219 (320)
T ss_dssp HHHHHHHHHH-HTTTCEEEEECSSCCCHHHH---HHH-------TC-----EECSSHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCCcChhhh---hhc-------Cc-----EEcCCHHHHHhhCCEEEEeccCchHHHhh
Confidence 9999999997 799999999999 7654211 111 11 12248999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 254 i~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
++++.|+.||+|++|||+|||+++|+++|.++|++|+|+||+||||++||..++|||++|||++|||++++|.
T Consensus 220 i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~ 292 (320)
T 1gdh_A 220 FNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAAT 292 (320)
T ss_dssp BSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBH
T ss_pred cCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcH
Confidence 9999999999999999999999999999999999999999999999999966789999999999999999985
No 17
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=2.7e-62 Score=461.25 Aligned_cols=282 Identities=38% Similarity=0.604 Sum_probs=250.9
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEccc
Q 020301 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (328)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~ 95 (328)
+||+++.++++. ..+.|++.++++++.... ..+.+++.+.+. ++|+++++...++++++++++|+| |+|++.|+
T Consensus 1 ~~vl~~~~~~~~-~~~~l~~~g~~v~~~~~~--~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~i~~~~~ 74 (311)
T 2cuk_A 1 MRVLVTRTLPGK-ALDRLRERGLEVEVHRGL--FLPKAELLKRVE-GAVGLIPTVEDRIDAEVMDRAKGL--KVIACYSV 74 (311)
T ss_dssp CEEEESSCCSSS-TTHHHHHTTCEEEECCSS--CCCHHHHHHHHT-TCSEEECCTTSCBCHHHHHHSTTC--CEEECSSS
T ss_pred CEEEEeCCCCHH-HHHHHHhcCCeEEEecCC--CCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEECCc
Confidence 578888877654 357788776787654322 357788888887 799999887678999999999987 99999999
Q ss_pred cCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH
Q 020301 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (328)
Q Consensus 96 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~ 175 (328)
|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|.+....+.++.|+|+||||+|.
T Consensus 75 G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~ 154 (311)
T 2cuk_A 75 GVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGR 154 (311)
T ss_dssp CCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSH
T ss_pred CccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECH
Confidence 99999999999999999999999999999999999999999999999999999997665433457899999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcccc
Q 020301 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (328)
Q Consensus 176 IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~ 255 (328)
||+.+|+++ ++|||+|++|||+.... . ....++++++++||+|++|+|++++|+++++
T Consensus 155 IG~~~A~~l-~~~G~~V~~~d~~~~~~-----------------~----~~~~~l~ell~~aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 155 IGQAVAKRA-LAFGMRVVYHARTPKPL-----------------P----YPFLSLEELLKEADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCSS-----------------S----SCBCCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCCccc-----------------c----cccCCHHHHHhhCCEEEEeCCCChHHHhhcC
Confidence 999999997 79999999999986431 0 1246899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEEcCCCCCCCc
Q 020301 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 256 ~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~ 326 (328)
++.|+.||+|+++||+|||+++|+++|+++|+ |+|+||+||||++||++ ++|||++|||++|||+|++|.
T Consensus 213 ~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~ 283 (311)
T 2cuk_A 213 RERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGR 283 (311)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBH
T ss_pred HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCH
Confidence 99999999999999999999999999999999 99999999999999964 689999999999999999985
No 18
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=3.6e-63 Score=471.34 Aligned_cols=284 Identities=27% Similarity=0.420 Sum_probs=240.3
Q ss_pred eEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEE
Q 020301 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (328)
Q Consensus 16 ~~vlv~~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~ 92 (328)
|||++.. +.. ..+.+.|.+ .++++...... ..+++.+.+. ++|+++++...++++++++++|+.++|+|++
T Consensus 1 Mkil~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 74 (333)
T 1dxy_A 1 MKIIAYGARVDE-IQYFKQWAKDTGNTLEYHTEF----LDENTVEWAK-GFDGINSLQTTPYAAGVFEKMHAYGIKFLTI 74 (333)
T ss_dssp CEEEECSCCTTT-HHHHHHHHHHHCCEEEECSSC----CCTTGGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEeccccC-HHHHHHHHHhCCeEEEEcCCC----ChHHHHHHhc-CCeEEEEcCCCCCCHHHHHhCcccCceEEEE
Confidence 4777753 333 345566643 46666543321 2245555565 7999998877789999999999834499999
Q ss_pred ccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEe
Q 020301 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (328)
Q Consensus 93 ~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG 172 (328)
.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. |.. ...+.++.|+|+||||
T Consensus 75 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG 152 (333)
T 1dxy_A 75 RNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYE-KAG-TFIGKELGQQTVGVMG 152 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHH-HHT-CCCCCCGGGSEEEEEC
T ss_pred cCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcc-ccc-CCCccCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999984 511 1356899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhc
Q 020301 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (328)
Q Consensus 173 ~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~ 252 (328)
+|+||+.+|+++ ++|||+|++||++..... ... ....++++++++||+|++|+|+|++|++
T Consensus 153 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~----------------~~~--~~~~~l~ell~~aDvV~~~~P~~~~t~~ 213 (333)
T 1dxy_A 153 TGHIGQVAIKLF-KGFGAKVIAYDPYPMKGD----------------HPD--FDYVSLEDLFKQSDVIDLHVPGIEQNTH 213 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCSSC----------------CTT--CEECCHHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhh----------------Hhc--cccCCHHHHHhcCCEEEEcCCCchhHHH
Confidence 999999999996 799999999999865310 000 1235899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCC-----------CC---CCcccCCCeEEc
Q 020301 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-----------MK---PGLSEMKNAIVV 318 (328)
Q Consensus 253 li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~-----------~~---~~L~~~~nvilT 318 (328)
+|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||+ ++ +|||++|||++|
T Consensus 214 li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~T 293 (333)
T 1dxy_A 214 IINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLS 293 (333)
T ss_dssp SBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEEC
T ss_pred HhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999993 22 379999999999
Q ss_pred CCCCCCCc
Q 020301 319 PHIASASK 326 (328)
Q Consensus 319 PHia~~t~ 326 (328)
||+||+|.
T Consensus 294 PHia~~t~ 301 (333)
T 1dxy_A 294 PHIAYYTE 301 (333)
T ss_dssp SSCTTCSH
T ss_pred CccccChH
Confidence 99999985
No 19
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.5e-62 Score=459.86 Aligned_cols=285 Identities=34% Similarity=0.557 Sum_probs=248.9
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEc
Q 020301 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (328)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~ 93 (328)
++|||+++.++++. ..+.|++.++++.. . ...+.+++.+.+. ++|+++++...++++++++++|+| |+|++.
T Consensus 2 ~~~~il~~~~~~~~-~~~~l~~~~~~~~~-~---~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~ 73 (307)
T 1wwk_A 2 KRMKVLVAAPLHEK-AIQVLKDAGLEVIY-E---EYPDEDRLVELVK-DVEAIIVRSKPKVTRRVIESAPKL--KVIARA 73 (307)
T ss_dssp --CEEEECSCCCHH-HHHHHHHTTCEEEE-C---SSCCHHHHHHHST-TCSEEEESSCSCBCHHHHTTCTTC--CEEEES
T ss_pred CceEEEEeCCCCHH-HHHHHHhCCeEEEe-C---CCCCHHHHHHHhc-CCEEEEEcCCCCCCHHHHhhCCCC--eEEEEC
Confidence 35789998887653 46778776666642 1 1246788888886 799999887667999999999987 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~ 173 (328)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|.. ....+.++.|+|+||||+
T Consensus 74 ~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~~~l~g~~vgIiG~ 150 (307)
T 1wwk_A 74 GVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAK---KEAMGIELEGKTIGIIGF 150 (307)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCT---TTCCBCCCTTCEEEEECC
T ss_pred CccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc---cCcCCcccCCceEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999998753 123468999999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcc
Q 020301 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (328)
Q Consensus 174 G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~l 253 (328)
|.||+++|+++ ++|||+|++||++..+... . ..|. ...++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~---~-------~~g~------~~~~l~ell~~aDvV~l~~p~~~~t~~l 213 (307)
T 1wwk_A 151 GRIGYQVAKIA-NALGMNILLYDPYPNEERA---K-------EVNG------KFVDLETLLKESDVVTIHVPLVESTYHL 213 (307)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---H-------HTTC------EECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCChhhH---h-------hcCc------cccCHHHHHhhCCEEEEecCCChHHhhh
Confidence 99999999997 7999999999998754211 1 1121 2248999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCC-CCCCcccCCCeEEcCCCCCCCc
Q 020301 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 254 i~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~-~~~~L~~~~nvilTPHia~~t~ 326 (328)
|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+ .++|||++|||++|||+|++|.
T Consensus 214 i~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~ 287 (307)
T 1wwk_A 214 INEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTV 287 (307)
T ss_dssp BCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBH
T ss_pred cCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcH
Confidence 999999999999999999999999999999999999999999999999998 4689999999999999999985
No 20
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=1.5e-62 Score=467.28 Aligned_cols=285 Identities=29% Similarity=0.445 Sum_probs=241.5
Q ss_pred eEEEEeCCCCc-hHHHHHHHhC--CCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEE
Q 020301 16 YRVVSTKPMPG-TRWINLLIEQ--DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (328)
Q Consensus 16 ~~vlv~~~~~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~ 92 (328)
|||++....+. ..+.+.|++. ++++...... ..+++.+.+. ++|+++++...++++++++++|+.++|+|++
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 76 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKL----LTPETVALAK-GADGVVVYQQLDYIAETLQALADNGITKMSL 76 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSC----CCTTTGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCC----CcHHHHHHhc-CCcEEEEcCCCCCCHHHHHhccccCCeEEEE
Confidence 67877643322 3356666653 4566543221 1245555665 7999998766789999999999834499999
Q ss_pred ccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEe
Q 020301 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (328)
Q Consensus 93 ~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG 172 (328)
.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. |.. ..+.++.|+|+||||
T Consensus 77 ~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~--~~~~~l~g~~vgIiG 153 (333)
T 1j4a_A 77 RNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLR-WAP--TIGREVRDQVVGVVG 153 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCC-CTT--CCBCCGGGSEEEEEC
T ss_pred CCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCc-cCC--cccccCCCCEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999995 643 357899999999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhc
Q 020301 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (328)
Q Consensus 173 ~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~ 252 (328)
+|+||+.+|+++ ++|||+|++||++..+..++ . .....++++++++||+|++|+|+|++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~------------~-----~~~~~~l~ell~~aDvV~l~~p~~~~t~~ 215 (333)
T 1j4a_A 154 TGHIGQVFMQIM-EGFGAKVITYDIFRNPELEK------------K-----GYYVDSLDDLYKQADVISLHVPDVPANVH 215 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH------------T-----TCBCSCHHHHHHHCSEEEECSCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhHHh------------h-----CeecCCHHHHHhhCCEEEEcCCCcHHHHH
Confidence 999999999997 79999999999987543110 0 11123899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCC--CC--------C----CcccCCCeEEc
Q 020301 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MK--------P----GLSEMKNAIVV 318 (328)
Q Consensus 253 li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~--~~--------~----~L~~~~nvilT 318 (328)
+|+++.|+.||+|++|||+|||+++|+++|++||++|+|+||+||||++||+ +. + |||++|||++|
T Consensus 216 li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilT 295 (333)
T 1j4a_A 216 MINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVT 295 (333)
T ss_dssp CBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEEC
T ss_pred HHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999993 21 2 59999999999
Q ss_pred CCCCCCCc
Q 020301 319 PHIASASK 326 (328)
Q Consensus 319 PHia~~t~ 326 (328)
||+||+|.
T Consensus 296 PHia~~t~ 303 (333)
T 1j4a_A 296 PKTAFYTT 303 (333)
T ss_dssp SSCTTCBH
T ss_pred CccccCHH
Confidence 99999985
No 21
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.8e-62 Score=459.49 Aligned_cols=283 Identities=27% Similarity=0.454 Sum_probs=250.5
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEc
Q 020301 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (328)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~ 93 (328)
.+|||+++.++++ .+.+.|++.++++.. . ...+++++.+.+. ++|+++++...++++++++++|+| |+|++.
T Consensus 4 ~~mkil~~~~~~~-~~~~~l~~~~~~v~~-~---~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~ 75 (313)
T 2ekl_A 4 YTVKALITDPIDE-ILIKTLREKGIQVDY-M---PEISKEELLNIIG-NYDIIVVRSRTKVTKDVIEKGKKL--KIIARA 75 (313)
T ss_dssp CCCEEEECSCCCH-HHHHHHHHTTCEEEE-C---TTCCHHHHHHHGG-GCSEEEECSSSCBCHHHHHHCTTC--CEEEEC
T ss_pred cceEEEEECCCCH-HHHHHHHhCCcEEEe-C---CCCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEEc
Confidence 4578999888765 346788877776642 1 2346788888887 799999876678999999999987 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~ 173 (328)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ..+.++.|+|+||||+
T Consensus 76 ~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~-----~~~~~l~g~~vgIIG~ 150 (313)
T 2ekl_A 76 GIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKK-----IEGLELAGKTIGIVGF 150 (313)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC-----CCCCCCTTCEEEEESC
T ss_pred CCCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC-----CCCCCCCCCEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999998752 3467999999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcc
Q 020301 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (328)
Q Consensus 174 G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~l 253 (328)
|+||+.+|+++ ++|||+|++||++...... . ..|. . ..++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~---~-------~~g~-----~-~~~l~ell~~aDvVvl~~P~~~~t~~l 213 (313)
T 2ekl_A 151 GRIGTKVGIIA-NAMGMKVLAYDILDIREKA---E-------KINA-----K-AVSLEELLKNSDVISLHVTVSKDAKPI 213 (313)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---H-------HTTC-----E-ECCHHHHHHHCSEEEECCCCCTTSCCS
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCcchhHH---H-------hcCc-----e-ecCHHHHHhhCCEEEEeccCChHHHHh
Confidence 99999999997 7999999999998764211 1 1121 1 248999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCC---CcccCCCeEEcCCCCCCCc
Q 020301 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKP---GLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 254 i~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~---~L~~~~nvilTPHia~~t~ 326 (328)
++++.|+.||+|++|||+|||+++|+++|.++|++|+|+||+||||++||++++ |||++|||++|||+|++|.
T Consensus 214 i~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~ 289 (313)
T 2ekl_A 214 IDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTK 289 (313)
T ss_dssp BCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSH
T ss_pred hCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcH
Confidence 999999999999999999999999999999999999999999999999998887 9999999999999999985
No 22
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=1.5e-62 Score=463.30 Aligned_cols=275 Identities=20% Similarity=0.245 Sum_probs=233.6
Q ss_pred CCeEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEE
Q 020301 14 GKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (328)
Q Consensus 14 ~~~~vlv~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~ 92 (328)
+.|||++..+.+ ...|.+.|++..+++++....+ ++ .. ++|+++++. .+++++++ |+| |+|++
T Consensus 2 ~~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~~~-----~~----~~-~ad~~i~~~---~~~~~l~~-~~L--k~I~~ 65 (315)
T 3pp8_A 2 NAMEIIFYHPTFNAAWWVNALEKALPHARVREWKV-----GD----NN-PADYALVWQ---PPVEMLAG-RRL--KAVFV 65 (315)
T ss_dssp CCEEEEEECSSSCHHHHHHHHHHHSTTEEEEECCT-----TC----CS-CCSEEEESS---CCHHHHTT-CCC--SEEEE
T ss_pred CceEEEEEcCCCchHHHHHHHHHHCCCCEEEecCC-----CC----cc-CcEEEEECC---CCHHHhCC-CCc--eEEEE
Confidence 568999987754 3467888887666666543322 11 22 699999874 46899998 887 99999
Q ss_pred ccccCCcc-C-hhH---HHhCCceEecCCCCC-CchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCC
Q 020301 93 MAVGYNNV-D-VNA---ANKYGIAVGNTPGVL-TETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQ 166 (328)
Q Consensus 93 ~g~G~d~i-d-~~~---~~~~gI~v~n~p~~~-~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~ 166 (328)
.|+|+|+| | +++ +.++||+|+|+++++ +.+||||++++||+++|++..+++.+++|.|..+ .+++++|+
T Consensus 66 ~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~ 140 (315)
T 3pp8_A 66 LGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL-----PEYTREEF 140 (315)
T ss_dssp SSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTC
T ss_pred CCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC-----CCCCcCCC
Confidence 99999999 7 887 678999999999874 7999999999999999999999999999988643 35799999
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~pl 246 (328)
|+||||+|+||+++|+++ ++|||+|++||+++... + +.. ......++++++++||+|++|+|+
T Consensus 141 tvGIiG~G~IG~~vA~~l-~~~G~~V~~~dr~~~~~-~-------------~~~--~~~~~~~l~ell~~aDiV~l~~Pl 203 (315)
T 3pp8_A 141 SVGIMGAGVLGAKVAESL-QAWGFPLRCWSRSRKSW-P-------------GVE--SYVGREELRAFLNQTRVLINLLPN 203 (315)
T ss_dssp CEEEECCSHHHHHHHHHH-HTTTCCEEEEESSCCCC-T-------------TCE--EEESHHHHHHHHHTCSEEEECCCC
T ss_pred EEEEEeeCHHHHHHHHHH-HHCCCEEEEEcCCchhh-h-------------hhh--hhcccCCHHHHHhhCCEEEEecCC
Confidence 999999999999999997 79999999999986431 0 100 011125899999999999999999
Q ss_pred ChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEEcCCCCCCC
Q 020301 247 DKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASAS 325 (328)
Q Consensus 247 t~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t 325 (328)
|++|+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++||++ ++|||++|||++|||+||+|
T Consensus 204 t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t 283 (315)
T 3pp8_A 204 TAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVT 283 (315)
T ss_dssp CGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCC
T ss_pred chhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999986 47999999999999999998
Q ss_pred c
Q 020301 326 K 326 (328)
Q Consensus 326 ~ 326 (328)
.
T Consensus 284 ~ 284 (315)
T 3pp8_A 284 R 284 (315)
T ss_dssp C
T ss_pred H
Confidence 5
No 23
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=3.1e-62 Score=472.61 Aligned_cols=277 Identities=22% Similarity=0.236 Sum_probs=237.7
Q ss_pred HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecC--CCCccHHHHHHhhccCCceEEEccccCCccChhHHH
Q 020301 29 WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (328)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~--~~~~~~~~l~~~~~l~~k~i~~~g~G~d~id~~~~~ 106 (328)
+.+.|++.++++.+.... ..+++++.+.+. ++|++++.. ..++++++++++|+| |+|++.|+|+||||+++|+
T Consensus 59 ~~~~l~~~g~~v~~~~~~--~~~~~~l~~~l~-~ad~li~~~~~~~~i~~~~l~~~p~L--k~I~~~g~G~d~iD~~aa~ 133 (393)
T 2nac_A 59 LRKYLESNGHTLVVTSDK--DGPDSVFERELV-DADVVISQPFWPAYLTPERIAKAKNL--KLALTAGIGSDHVDLQSAI 133 (393)
T ss_dssp CHHHHHHTTCEEEEESCC--SSTTSHHHHHHT-TCSEEEEBTTBCCCBCHHHHHHCTTC--CEEEESSSCCTTBCHHHHH
T ss_pred HHHHHHhCCCEEEEecCC--CCCHHHHHHhcc-CCCEEEEcCccCCCCCHHHHhhCCCC--cEEEEcCccccccCHHHHh
Confidence 335777778787654322 223457777887 799998763 347899999999987 9999999999999999999
Q ss_pred hCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHh
Q 020301 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (328)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~ 186 (328)
++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|.. ......+.+|+|+|+||||+|+||+.+|+++ +
T Consensus 134 ~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~-~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l-~ 211 (393)
T 2nac_A 134 DRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNI-ADCVSHAYDLEAMHVGTVAAGRIGLAVLRRL-A 211 (393)
T ss_dssp HTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCH-HHHHTTCCCCTTCEEEEECCSHHHHHHHHHH-G
T ss_pred cCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCc-cccccCCccCCCCEEEEEeECHHHHHHHHHH-H
Confidence 9999999999999999999999999999999999999999998842 1111235789999999999999999999996 7
Q ss_pred cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCc
Q 020301 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEA 266 (328)
Q Consensus 187 ~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga 266 (328)
+|||+|++||++...... ...+ | .....++++++++||+|++|+|+|++|+++|+++.|++||+|+
T Consensus 212 a~G~~V~~~d~~~~~~~~--~~~~-------G-----~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga 277 (393)
T 2nac_A 212 PFDVHLHYTDRHRLPESV--EKEL-------N-----LTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGA 277 (393)
T ss_dssp GGTCEEEEECSSCCCHHH--HHHH-------T-----CEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTE
T ss_pred hCCCEEEEEcCCccchhh--Hhhc-------C-----ceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCC
Confidence 999999999998643211 0111 1 1123589999999999999999999999999999999999999
Q ss_pred EEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEEcCCCCCCCc
Q 020301 267 ILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 267 ~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~ 326 (328)
+|||+|||+++|++||++||++|+|+||+||||++||++ ++|||++|||++|||+|++|.
T Consensus 278 ilIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~ 338 (393)
T 2nac_A 278 YIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTL 338 (393)
T ss_dssp EEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSH
T ss_pred EEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcH
Confidence 999999999999999999999999999999999999975 579999999999999999985
No 24
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=2.4e-62 Score=470.63 Aligned_cols=291 Identities=23% Similarity=0.255 Sum_probs=246.1
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecC--CCCccHHHHHHhhccCCceEE
Q 020301 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFS 91 (328)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~--~~~~~~~~l~~~~~l~~k~i~ 91 (328)
.+++||+.+.... .+.+.|++.++++.+.... ..+.+++.+.+. ++|++++.. ..++++++++++|+| |+|+
T Consensus 16 ~~~~vl~~d~~~~-~~~~~l~~~~~~v~~~~~~--~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~~~l~~~~~L--k~I~ 89 (364)
T 2j6i_A 16 DEEKLYGCTENKL-GIANWLKDQGHELITTSDK--EGGNSVLDQHIP-DADIIITTPFHPAYITKERIDKAKKL--KLVV 89 (364)
T ss_dssp HCTTCTTBTTTGG-GCHHHHHHTTCEEEEESCC--SSTTSHHHHHGG-GCSEEEECTTSCCCBCHHHHHHCTTC--CEEE
T ss_pred cCceEEEecCccH-HHHHHHHhCCCEEEEcCCC--CCCHHHHHHHhh-CCeEEEecCcCCCCCCHHHHhhCCCC--eEEE
Confidence 3566777666544 3456778778887654432 124577888887 799998754 246899999999987 9999
Q ss_pred EccccCCccChhHHHhC--CceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEE
Q 020301 92 NMAVGYNNVDVNAANKY--GIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (328)
Q Consensus 92 ~~g~G~d~id~~~~~~~--gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvg 169 (328)
+.|+|+|+||+++|+++ ||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ......+.+|+|+|+|
T Consensus 90 ~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~-~~~~~~~~~l~g~tvg 168 (364)
T 2j6i_A 90 VAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEV-AAIAKDAYDIEGKTIA 168 (364)
T ss_dssp ESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCH-HHHHTTCCCSTTCEEE
T ss_pred ECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCc-CcccCCcccCCCCEEE
Confidence 99999999999999999 99999999999999999999999999999999999999998842 1111246799999999
Q ss_pred EEecCHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCCh
Q 020301 170 VIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (328)
Q Consensus 170 IiG~G~IG~~vA~~l~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~ 248 (328)
|||+|+||+.+|+++ ++|||+ |++||++..+... ... .| .....++++++++||+|++|+|+|+
T Consensus 169 IIG~G~IG~~vA~~l-~~~G~~~V~~~d~~~~~~~~--~~~-------~g-----~~~~~~l~ell~~aDvV~l~~P~t~ 233 (364)
T 2j6i_A 169 TIGAGRIGYRVLERL-VPFNPKELLYYDYQALPKDA--EEK-------VG-----ARRVENIEELVAQADIVTVNAPLHA 233 (364)
T ss_dssp EECCSHHHHHHHHHH-GGGCCSEEEEECSSCCCHHH--HHH-------TT-----EEECSSHHHHHHTCSEEEECCCCST
T ss_pred EECcCHHHHHHHHHH-HhCCCcEEEEECCCccchhH--HHh-------cC-----cEecCCHHHHHhcCCEEEECCCCCh
Confidence 999999999999997 799997 9999987643211 011 11 1223589999999999999999999
Q ss_pred hhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccC--C---CeEEcCCCC
Q 020301 249 TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEM--K---NAIVVPHIA 322 (328)
Q Consensus 249 ~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~--~---nvilTPHia 322 (328)
+|+++|+++.|+.||+|++|||+|||+++|++||++||++|+|+||+||||++||++ ++|||++ | ||++|||+|
T Consensus 234 ~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia 313 (364)
T 2j6i_A 234 GTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYS 313 (364)
T ss_dssp TTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCG
T ss_pred HHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccC
Confidence 999999999999999999999999999999999999999999999999999999975 5799999 9 999999999
Q ss_pred CCCc
Q 020301 323 SASK 326 (328)
Q Consensus 323 ~~t~ 326 (328)
|+|.
T Consensus 314 ~~t~ 317 (364)
T 2j6i_A 314 GTTL 317 (364)
T ss_dssp GGSH
T ss_pred cCCH
Confidence 9985
No 25
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=7e-60 Score=448.34 Aligned_cols=282 Identities=29% Similarity=0.453 Sum_probs=245.5
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHH-HHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEc
Q 020301 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVED-IIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (328)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~ 93 (328)
+++|+++.++++. +.+.|++. +++..... ..+.++ +.+.+. ++|+++++...++++++++++|+| |+|++.
T Consensus 23 ~~~vl~~~~~~~~-~~~~l~~~-~~~~~~~~---~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~p~L--k~I~~~ 94 (333)
T 3ba1_A 23 AIGVLMMCPMSTY-LEQELDKR-FKLFRYWT---QPAQRDFLALQAE-SIRAVVGNSNAGADAELIDALPKL--EIVSSF 94 (333)
T ss_dssp CCEEEECSCCCHH-HHHHHHHH-SEEEEGGG---CSSHHHHHHHHTT-TEEEEEECSSSCBCHHHHHHCTTC--CEEEES
T ss_pred CCEEEEeCCCCHH-HHHHHHhc-CCEEEecC---CCChHHHHHHHhC-CCEEEEEcCCCCCCHHHHhhCCCC--cEEEEc
Confidence 4689999887753 46777653 56554321 123455 455555 799999877778999999999987 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~ 173 (328)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. +. ....+.+++|+|+||||+
T Consensus 95 ~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~-~~~~~~~l~g~~vgIIG~ 172 (333)
T 3ba1_A 95 SVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWK-FG-DFKLTTKFSGKRVGIIGL 172 (333)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGG-GC-CCCCCCCCTTCCEEEECC
T ss_pred CccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC-cc-ccccccccCCCEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999985 21 113468999999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcc
Q 020301 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (328)
Q Consensus 174 G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~l 253 (328)
|+||+.+|+++ ++|||+|++||++.... . +.....++++++++||+|++|+|++++|+++
T Consensus 173 G~iG~~vA~~l-~~~G~~V~~~dr~~~~~--------------~-----g~~~~~~l~ell~~aDvVil~vP~~~~t~~l 232 (333)
T 3ba1_A 173 GRIGLAVAERA-EAFDCPISYFSRSKKPN--------------T-----NYTYYGSVVELASNSDILVVACPLTPETTHI 232 (333)
T ss_dssp SHHHHHHHHHH-HTTTCCEEEECSSCCTT--------------C-----CSEEESCHHHHHHTCSEEEECSCCCGGGTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCchhc--------------c-----CceecCCHHHHHhcCCEEEEecCCChHHHHH
Confidence 99999999997 79999999999986431 0 1123468999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 254 i~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
++++.|+.||+|++|||+|||.++|+++|.++|++|+++||+||||++||.+++|||++|||++|||+|++|.
T Consensus 233 i~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~ 305 (333)
T 3ba1_A 233 INREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTV 305 (333)
T ss_dssp BCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSH
T ss_pred hhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCH
Confidence 9999999999999999999999999999999999999999999999999987789999999999999999984
No 26
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=7.8e-59 Score=441.25 Aligned_cols=294 Identities=32% Similarity=0.461 Sum_probs=253.5
Q ss_pred CCCCeEEEEeCCCCchHHHHHHHhC-CCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHh-hccCCce
Q 020301 12 PNGKYRVVSTKPMPGTRWINLLIEQ-DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGKA 89 (328)
Q Consensus 12 ~~~~~~vlv~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~l~~k~ 89 (328)
|.++|||+++.++++ .+.+.|++. ++++.... .+...+++++.+.+. ++|++++....++++++++++ |+| |+
T Consensus 5 ~~~~~~il~~~~~~~-~~~~~l~~~~~~~v~~~~-~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~~L--k~ 79 (330)
T 2gcg_A 5 PVRLMKVFVTRRIPA-EGRVALARAADCEVEQWD-SDEPIPAKELERGVA-GAHGLLCLLSDHVDKRILDAAGANL--KV 79 (330)
T ss_dssp --CCEEEEESSCCCH-HHHHHHHHCTTEEEEECC-SSSCCCHHHHHHHHT-TCSEEEECTTSCBCHHHHHHHCTTC--CE
T ss_pred CCCCCEEEEECCCCH-HHHHHHHhcCCceEEEec-CCCCCCHHHHHHHhc-CCeEEEECCCCCCCHHHHHhcCCCc--eE
Confidence 567789999887765 456777765 35665432 223457889988887 799999876678999999999 887 99
Q ss_pred EEEccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEE
Q 020301 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (328)
Q Consensus 90 i~~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvg 169 (328)
|++.|+|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.+....|.++.|+|+|
T Consensus 80 I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vg 159 (330)
T 2gcg_A 80 ISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVG 159 (330)
T ss_dssp EEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEE
T ss_pred EEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997775443457899999999
Q ss_pred EEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChh
Q 020301 170 VIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT 249 (328)
Q Consensus 170 IiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~ 249 (328)
|||+|.||+.+|+++ ++||++|++||++..... . .. ..+ .. ..++++++++||+|++|+|++++
T Consensus 160 IIG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~-~-~~-------~~g-----~~-~~~l~e~l~~aDvVi~~vp~~~~ 223 (330)
T 2gcg_A 160 IIGLGRIGQAIARRL-KPFGVQRFLYTGRQPRPE-E-AA-------EFQ-----AE-FVSTPELAAQSDFIVVACSLTPA 223 (330)
T ss_dssp EECCSHHHHHHHHHH-GGGTCCEEEEESSSCCHH-H-HH-------TTT-----CE-ECCHHHHHHHCSEEEECCCCCTT
T ss_pred EECcCHHHHHHHHHH-HHCCCEEEEECCCCcchh-H-HH-------hcC-----ce-eCCHHHHHhhCCEEEEeCCCChH
Confidence 999999999999997 799999999998764221 1 00 111 11 23899999999999999999999
Q ss_pred hhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccCCCeEEcCCCCCCCc
Q 020301 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 250 t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~ 326 (328)
|+++++++.++.||+|++|||+|||+++|+++|.++|++|++.||++|||++||++ ++|||++|||++|||+|+.|.
T Consensus 224 t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~ 301 (330)
T 2gcg_A 224 TEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATH 301 (330)
T ss_dssp TTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBH
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999964 579999999999999999984
No 27
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1.4e-59 Score=448.48 Aligned_cols=290 Identities=28% Similarity=0.412 Sum_probs=239.8
Q ss_pred CCCCeEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceE
Q 020301 12 PNGKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAF 90 (328)
Q Consensus 12 ~~~~~~vlv~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i 90 (328)
+.++++|++.+... ..+ .+.++. ..++..+. ..+.+|+.+.+.+++|++++....++++++++++|+| |+|
T Consensus 18 ~~~kp~i~~l~~~~~~~~-~~~l~~-~~~~~~~~----~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L--k~I 89 (347)
T 1mx3_A 18 GSHMPLVALLDGRDCTVE-MPILKD-VATVAFCD----AQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKAL--RII 89 (347)
T ss_dssp ---CCEEEESSCSCCTTT-HHHHTT-TCEEEECC----CSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSC--CEE
T ss_pred CCCCCEEEEEcCCcchhh-HHHhhc-cceEEecC----CCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCC--CEE
Confidence 45678888876422 112 355654 34555432 2245666655422688887776678999999999987 999
Q ss_pred EEccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCc----c-cccccCC
Q 020301 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNL----F-VGNLLKG 165 (328)
Q Consensus 91 ~~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~----~-~~~~l~g 165 (328)
++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. .... . .+.++.|
T Consensus 90 ~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~-~~~~~~~~~~~~~~l~g 168 (347)
T 1mx3_A 90 VRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQ-SVEQIREVASGAARIRG 168 (347)
T ss_dssp EESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCC-SHHHHHHHTTTCCCCTT
T ss_pred EEcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccc-ccccccccccCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999842 1100 1 1268999
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
+|+||||+|+||+.+|+++ ++|||+|++||++..+.... .+ | .....++++++++||+|++|+|
T Consensus 169 ~tvGIIG~G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~---~~-------g-----~~~~~~l~ell~~aDvV~l~~P 232 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRA-KAFGFNVLFYDPYLSDGVER---AL-------G-----LQRVSTLQDLLFHSDCVTLHCG 232 (347)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTTTCEEEEECTTSCTTHHH---HH-------T-----CEECSSHHHHHHHCSEEEECCC
T ss_pred CEEEEEeECHHHHHHHHHH-HHCCCEEEEECCCcchhhHh---hc-------C-----CeecCCHHHHHhcCCEEEEcCC
Confidence 9999999999999999997 79999999999986532111 11 1 1233589999999999999999
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCC--CCCcccCCCeEEcCCCCC
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM--KPGLSEMKNAIVVPHIAS 323 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~--~~~L~~~~nvilTPHia~ 323 (328)
++++|+++|+++.|++||+|++|||+|||+++|+++|++||++|+|+||++|||+.||++ ++|||.+|||++|||+|+
T Consensus 233 ~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~ 312 (347)
T 1mx3_A 233 LNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAW 312 (347)
T ss_dssp CCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTT
T ss_pred CCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHH
Confidence 999999999999999999999999999999999999999999999999999999999975 479999999999999999
Q ss_pred CCc
Q 020301 324 ASK 326 (328)
Q Consensus 324 ~t~ 326 (328)
+|.
T Consensus 313 ~t~ 315 (347)
T 1mx3_A 313 YSE 315 (347)
T ss_dssp CCH
T ss_pred HHH
Confidence 985
No 28
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=2e-58 Score=439.14 Aligned_cols=289 Identities=39% Similarity=0.663 Sum_probs=251.2
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEcc
Q 020301 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (328)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g 94 (328)
++||+++.++++ .+.+.|++. +++++... ....+++++.+.+. ++|+++++...++++++++++|+| |+|++.|
T Consensus 2 ~~~il~~~~~~~-~~~~~l~~~-~~~~~~~~-~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~L--k~I~~~~ 75 (334)
T 2dbq_A 2 KPKVFITREIPE-VGIKMLEDE-FEVEVWGD-EKEIPREILLKKVK-EVDALVTMLSERIDKEVFENAPKL--RIVANYA 75 (334)
T ss_dssp CCEEEESSCCCH-HHHHHHHTT-SEEEECCC-SSCCCHHHHHHHTT-SCSEEEECTTSCBCHHHHHTCTTC--CEEEESS
T ss_pred CcEEEEecCCCH-HHHHHHHhc-CCEEEecC-CCCCCHHHHHHHhc-CcEEEEEcCCCCCCHHHHhhCCCc--eEEEECC
Confidence 468888887765 456777653 56664332 22357888888887 799999887678999999999987 9999999
Q ss_pred ccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCC----CCCCCcccccccCCCEEEE
Q 020301 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGV 170 (328)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~----~w~~~~~~~~~l~g~tvgI 170 (328)
+|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. .|.+....+.++.|+|+||
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgI 155 (334)
T 2dbq_A 76 VGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 155 (334)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEE
T ss_pred cccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999996 5654334578999999999
Q ss_pred EecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhh
Q 020301 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (328)
Q Consensus 171 iG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t 250 (328)
||+|.||+.+|+++ ++||++|++||++...... ..+ +. ...++++++++||+|++|+|++++|
T Consensus 156 IG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~~---~~~-------g~------~~~~l~~~l~~aDvVil~vp~~~~t 218 (334)
T 2dbq_A 156 IGLGRIGQAIAKRA-KGFNMRILYYSRTRKEEVE---REL-------NA------EFKPLEDLLRESDFVVLAVPLTRET 218 (334)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---HHH-------CC------EECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HhCCCEEEEECCCcchhhH---hhc-------Cc------ccCCHHHHHhhCCEEEECCCCChHH
Confidence 99999999999997 6999999999998754211 111 11 2358999999999999999999999
Q ss_pred hccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 251 ~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
+++++++.++.||+|++|||+|||.++|+++|.++|++|+++||++|||++||..++|||++|||++|||+|+.|.
T Consensus 219 ~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~ 294 (334)
T 2dbq_A 219 YHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASF 294 (334)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSH
T ss_pred HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcH
Confidence 9999999999999999999999999999999999999999999999999999955679999999999999999985
No 29
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.5e-58 Score=439.60 Aligned_cols=284 Identities=32% Similarity=0.499 Sum_probs=248.1
Q ss_pred CeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEcc
Q 020301 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (328)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g 94 (328)
++||+++.++++. ..+.|++. +++++.. ..+.+++.+.+. ++|+++++...++++++++++|+| |+|++.|
T Consensus 2 ~~~il~~~~~~~~-~~~~l~~~-~~~~~~~----~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~~ 72 (333)
T 2d0i_A 2 RPKVGVLLKMKRE-ALEELKKY-ADVEIIL----YPSGEELKGVIG-RFDGIIVSPTTKITREVLENAERL--KVISCHS 72 (333)
T ss_dssp CSEEEECSCCCHH-HHHHHHTT-SEEEECC----SCCHHHHHHHGG-GCSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CcEEEEECCCCHH-HHHHHHhc-CCEEEeC----CCCHHHHHHHhc-CCEEEEECCCCCCCHHHHhhCCCc--eEEEECC
Confidence 4689998887754 46777664 5666532 257788888887 799999877778999999999987 9999999
Q ss_pred ccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccc----cccCCCEEEE
Q 020301 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG----NLLKGQTVGV 170 (328)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~----~~l~g~tvgI 170 (328)
+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|.. ...| .+|.|+|+||
T Consensus 73 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~~~~~~l~g~~vgI 151 (333)
T 2d0i_A 73 AGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAK-IWTGFKRIESLYGKKVGI 151 (333)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHH-HHTTSCCCCCSTTCEEEE
T ss_pred cccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcc-cccCCcccCCCCcCEEEE
Confidence 9999999999999999999999999999999999999999999999999999999864421 1235 7899999999
Q ss_pred EecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhh
Q 020301 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (328)
Q Consensus 171 iG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t 250 (328)
||+|.||+.+|+++ ++|||+|++||++...... ..+ + . ...++++++++||+|++|+|++++|
T Consensus 152 IG~G~iG~~vA~~l-~~~G~~V~~~d~~~~~~~~---~~~-------g-----~-~~~~l~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 152 LGMGAIGKAIARRL-IPFGVKLYYWSRHRKVNVE---KEL-------K-----A-RYMDIDELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp ECCSHHHHHHHHHH-GGGTCEEEEECSSCCHHHH---HHH-------T-----E-EECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HHCCCEEEEECCCcchhhh---hhc-------C-----c-eecCHHHHHhhCCEEEEcCCCChHH
Confidence 99999999999997 7999999999998764211 111 1 1 1248999999999999999999999
Q ss_pred hccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCC-CeEEcCCCCCCCc
Q 020301 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK-NAIVVPHIASASK 326 (328)
Q Consensus 251 ~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~-nvilTPHia~~t~ 326 (328)
+++++++.|+.||+| +|||+|||.++|+++|.++|++|+++||++|||++||++++|||++| ||++|||+|++|.
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~ 290 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLAL 290 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCH
T ss_pred HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcH
Confidence 999999999999999 99999999999999999999999999999999999997778999999 9999999999985
No 30
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=4.1e-59 Score=447.80 Aligned_cols=258 Identities=28% Similarity=0.415 Sum_probs=223.0
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEc
Q 020301 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (328)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~ 93 (328)
++|||+++..++. ..+.+++.+ ++..... ...+.++ +. ++|+++++..+++++++++ .++| |+|++.
T Consensus 2 ~mmkIl~~~~~p~--~~~~~~~~~-~v~~~~~--~~~~~~~----l~-~ad~li~~~~~~v~~~ll~-~~~L--k~I~~~ 68 (381)
T 3oet_A 2 NAMKILVDENMPY--ARELFSRLG-EVKAVPG--RPIPVEE----LN-HADALMVRSVTKVNESLLS-GTPI--NFVGTA 68 (381)
T ss_dssp CCCEEEEETTSTT--HHHHHTTSS-EEEEECC-----CHHH----HT-TCSEEEECTTSCBSHHHHT-TSCC--CEEEES
T ss_pred CceEEEECCCCcH--HHHHHhhCC-cEEEeCC--CCCCHHH----HC-CCEEEEECCCCCCCHHHHc-CCCC--EEEEEc
Confidence 4689999998875 346676654 6665432 2345544 34 7999999887889999998 5555 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~ 173 (328)
|+|+||||+++++++||.|+|+||+|+.+||||++++||++.|+. |.+++|+|+||||+
T Consensus 69 ~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~---------------------g~~l~gktvGIIGl 127 (381)
T 3oet_A 69 TAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD---------------------GFSLRDRTIGIVGV 127 (381)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT---------------------TCCGGGCEEEEECC
T ss_pred cccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc---------------------CCccCCCEEEEEeE
Confidence 999999999999999999999999999999999999999999862 25799999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChh----
Q 020301 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT---- 249 (328)
Q Consensus 174 G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~---- 249 (328)
|+||+++|+++ ++|||+|++|||+.... + ......++++++++||+|++|+|+|++
T Consensus 128 G~IG~~vA~~l-~a~G~~V~~~d~~~~~~---------------~----~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~ 187 (381)
T 3oet_A 128 GNVGSRLQTRL-EALGIRTLLCDPPRAAR---------------G----DEGDFRTLDELVQEADVLTFHTPLYKDGPYK 187 (381)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECHHHHHT---------------T----CCSCBCCHHHHHHHCSEEEECCCCCCSSTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCChHHh---------------c----cCcccCCHHHHHhhCCEEEEcCcCCcccccc
Confidence 99999999997 79999999999854321 0 011347999999999999999999999
Q ss_pred hhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 250 t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
|+++|+++.|++||+|++|||+|||++||++||++||++|+++||+||||++||+++++||.++ +++|||+||+|.
T Consensus 188 T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~-~i~TPHiag~t~ 263 (381)
T 3oet_A 188 TLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV-DIGTSHIAGYTL 263 (381)
T ss_dssp CTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS-SEECSSCTTCCH
T ss_pred chhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC-EEECCccCcCcH
Confidence 9999999999999999999999999999999999999999999999999999999888899875 899999999984
No 31
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=2.7e-58 Score=440.36 Aligned_cols=290 Identities=27% Similarity=0.386 Sum_probs=242.8
Q ss_pred CeEEEEeCC-CC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhc----CCccEEEec------CCCCccHHHHHHh
Q 020301 15 KYRVVSTKP-MP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIG----DKCDGVIGQ------LTEDWGETLFAAL 82 (328)
Q Consensus 15 ~~~vlv~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~----~~~d~li~~------~~~~~~~~~l~~~ 82 (328)
++|||++.+ ++ .....+.|++ .+++.... ..+++++.+.+. +++|+++.. ...++++++++++
T Consensus 3 ~~~vl~~~~~~~~~~~~~~~l~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ 77 (348)
T 2w2k_A 3 RPRVLLLGDPARHLDDLWSDFQQ-KFEVIPAN----LTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHL 77 (348)
T ss_dssp CCEEEECSSCCSSCHHHHHHHHH-HSEEEECC----CCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTS
T ss_pred CcEEEEECCccccChHHHHHHHh-cceEEecC----CCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhc
Confidence 568998887 53 2233456655 35665432 246889988876 258888864 2358999999999
Q ss_pred h-ccCCceEEEccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCC---CCCCCC-Cc
Q 020301 83 S-RAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGL---YDGWLP-NL 157 (328)
Q Consensus 83 ~-~l~~k~i~~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~---w~~w~~-~~ 157 (328)
| +| |+|++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|. |..+.. ..
T Consensus 78 ~~~L--k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~ 155 (348)
T 2w2k_A 78 PSSL--KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIG 155 (348)
T ss_dssp CTTC--CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ccCc--eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCccccccccccc
Confidence 8 46 99999999999999999999999999999999999999999999999999999999999998 731100 01
Q ss_pred ccccccCCCEEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc
Q 020301 158 FVGNLLKGQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (328)
Q Consensus 158 ~~~~~l~g~tvgIiG~G~IG~~vA~~l~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (328)
..+.+++|+|+||||+|.||+.+|+++ + +|||+|++||++....... ..+ + .....++++++++
T Consensus 156 ~~~~~l~g~~vgIIG~G~IG~~vA~~l-~~~~G~~V~~~d~~~~~~~~~--~~~-------g-----~~~~~~l~ell~~ 220 (348)
T 2w2k_A 156 KSAHNPRGHVLGAVGLGAIQKEIARKA-VHGLGMKLVYYDVAPADAETE--KAL-------G-----AERVDSLEELARR 220 (348)
T ss_dssp TTCCCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEECSSCCCHHHH--HHH-------T-----CEECSSHHHHHHH
T ss_pred ccCcCCCCCEEEEEEECHHHHHHHHHH-HHhcCCEEEEECCCCcchhhH--hhc-------C-----cEEeCCHHHHhcc
Confidence 246799999999999999999999996 7 9999999999986432110 000 1 1122489999999
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeE
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAI 316 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi 316 (328)
||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|.++|++|+|.||++|||++||..++||+++|||+
T Consensus 221 aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nvi 300 (348)
T 2w2k_A 221 SDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVT 300 (348)
T ss_dssp CSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEE
T ss_pred CCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999996567899999999
Q ss_pred EcCCCCCCCc
Q 020301 317 VVPHIASASK 326 (328)
Q Consensus 317 lTPHia~~t~ 326 (328)
+|||+|++|.
T Consensus 301 ltPH~~~~t~ 310 (348)
T 2w2k_A 301 LTTHIGGVAI 310 (348)
T ss_dssp ECCSCTTCSH
T ss_pred EcCcCCCCCH
Confidence 9999999985
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2.1e-58 Score=433.17 Aligned_cols=262 Identities=23% Similarity=0.350 Sum_probs=227.8
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEccc
Q 020301 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (328)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~ 95 (328)
|||+++.++++ .+.+.|++.++++. . +.+. ++|+++++. .+.++++++|+| |+|++.|+
T Consensus 1 m~il~~~~~~~-~~~~~l~~~~~~v~---~-----------~~~~-~~d~~i~~~---~~~~~l~~~~~L--k~I~~~~~ 59 (303)
T 1qp8_A 1 MELYVNFELPP-EAEEELRKYFKIVR---G-----------GDLG-NVEAALVSR---ITAEELAKMPRL--KFIQVVTA 59 (303)
T ss_dssp CEEECCSCCCH-HHHHHHHTTCEEEC---S-----------SCCT-TBCCCCBSC---CCHHHHHHCTTC--CCEEBSSS
T ss_pred CEEEEccCCCH-HHHHHHHhcCCccc---h-----------hhhC-CCEEEEECC---CCHHHHhhCCCC--cEEEECCc
Confidence 47888888765 45677876654431 1 1233 689888764 346899999987 99999999
Q ss_pred cCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH
Q 020301 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (328)
Q Consensus 96 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~ 175 (328)
|+|+||++++ ++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..+. .+.++.|+|+||||+|+
T Consensus 60 G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~----~~~~l~g~~vgIIG~G~ 134 (303)
T 1qp8_A 60 GLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDV----EIPLIQGEKVAVLGLGE 134 (303)
T ss_dssp CCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCS----CCCCCTTCEEEEESCST
T ss_pred CcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCC----CCCCCCCCEEEEEccCH
Confidence 9999999985 799999999999999999999999999999999999999999885321 23589999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcccc
Q 020301 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (328)
Q Consensus 176 IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~ 255 (328)
||+.+|+++ ++|||+|++|||+..+ . +.....++++++++||+|++|+|++++|+++|+
T Consensus 135 IG~~~A~~l-~~~G~~V~~~dr~~~~----------------~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~ 193 (303)
T 1qp8_A 135 IGTRVGKIL-AALGAQVRGFSRTPKE----------------G----PWRFTNSLEEALREARAAVCALPLNKHTRGLVK 193 (303)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCC----------------S----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCccc----------------c----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhC
Confidence 999999997 7999999999997641 0 112346899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCC-CCCCCC-CCCcccCCCeEEcCCCCCC
Q 020301 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF-EDEPYM-KPGLSEMKNAIVVPHIASA 324 (328)
Q Consensus 256 ~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~-~~EP~~-~~~L~~~~nvilTPHia~~ 324 (328)
++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+|||| ++||++ ++|||++|||++|||+||+
T Consensus 194 ~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~ 264 (303)
T 1qp8_A 194 YQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGG 264 (303)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSS
T ss_pred HHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCC
Confidence 99999999999999999999999999999999999999999999 889986 5799999999999999998
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=1.5e-56 Score=449.84 Aligned_cols=284 Identities=31% Similarity=0.442 Sum_probs=249.7
Q ss_pred CCeEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEc
Q 020301 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (328)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~ 93 (328)
++|||++++++++. ..+.|++. +++++.. ..+++++.+.+. ++|+++++..+++++++++++|+| |+|++.
T Consensus 3 ~~~~vl~~~~~~~~-~~~~l~~~-~~v~~~~----~~~~~~~~~~~~-~~d~li~~~~~~~~~~~l~~~~~L--k~i~~~ 73 (529)
T 1ygy_A 3 SLPVVLIADKLAPS-TVAALGDQ-VEVRWVD----GPDRDKLLAAVP-EADALLVRSATTVDAEVLAAAPKL--KIVARA 73 (529)
T ss_dssp CCCEEEECSSCCGG-GGTTSCSS-SEEEECC----TTSHHHHHHHGG-GCSEEEECSSSCBCHHHHHTCTTC--CEEEES
T ss_pred CCcEEEEeCCCCHH-HHHHHhcC-ceEEEcC----CCCHHHHHHHhc-CCEEEEEcCCCCCCHHHHhhCCCC--cEEEEC
Confidence 46799999888754 34566554 6766532 246789988887 799999987788999999999987 999999
Q ss_pred cccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec
Q 020301 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (328)
Q Consensus 94 g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~ 173 (328)
|+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|.|.. ..+.|.+++|+|+||||+
T Consensus 74 ~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~---~~~~~~~l~g~~vgIIG~ 150 (529)
T 1ygy_A 74 GVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKR---SSFSGTEIFGKTVGVVGL 150 (529)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCG---GGCCBCCCTTCEEEEECC
T ss_pred CcCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcc---cCcCccccCCCEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999998752 224578999999999999
Q ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhcc
Q 020301 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (328)
Q Consensus 174 G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~l 253 (328)
|+||+++|+++ ++|||+|++|||+...... . ..| .. ..++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~a---~-------~~g-----~~-~~~l~e~~~~aDvV~l~~P~~~~t~~~ 213 (529)
T 1ygy_A 151 GRIGQLVAQRI-AAFGAYVVAYDPYVSPARA---A-------QLG-----IE-LLSLDDLLARADFISVHLPKTPETAGL 213 (529)
T ss_dssp SHHHHHHHHHH-HTTTCEEEEECTTSCHHHH---H-------HHT-----CE-ECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HhCCCEEEEECCCCChhHH---H-------hcC-----cE-EcCHHHHHhcCCEEEECCCCchHHHHH
Confidence 99999999997 7999999999998643111 1 112 11 248999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 254 i~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
++++.++.||+|+++||++||+++|+++|+++|++|+++||++|||+.||..++|||++||+++|||++++|.
T Consensus 214 i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ 286 (529)
T 1ygy_A 214 IDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTA 286 (529)
T ss_dssp BCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBH
T ss_pred hCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCH
Confidence 9999999999999999999999999999999999999999999999999988889999999999999998774
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.4e-57 Score=420.44 Aligned_cols=228 Identities=26% Similarity=0.387 Sum_probs=204.0
Q ss_pred CccEEEecCCCCccHHHHHHhhccCCceEEEccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHH
Q 020301 62 KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA 141 (328)
Q Consensus 62 ~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~ 141 (328)
++|++++. ..++ ++|+| |+|++.|+|+|+||+++|++++|.++| +|.++.+||||++++||++.|++..+
T Consensus 34 ~ad~li~~-~~~~------~~~~L--k~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~ 103 (290)
T 3gvx_A 34 DAEAQVIK-DRYV------LGKRT--KMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILEN 103 (290)
T ss_dssp CCSEEEES-SCCC------CCSSC--CEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred hhhhhhhh-hhhh------hhhhh--HHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhh
Confidence 79999984 3332 67877 999999999999999999987766655 58899999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCC
Q 020301 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP 221 (328)
Q Consensus 142 ~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (328)
++.+++|.|... ..+++.|+|+||||+|.||+++|+++ ++|||+|++|||+..+.. .
T Consensus 104 ~~~~~~g~w~~~-----~~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~--- 160 (290)
T 3gvx_A 104 NELMKAGIFRQS-----PTTLLYGKALGILGYGGIGRRVAHLA-KAFGMRVIAYTRSSVDQN--------------V--- 160 (290)
T ss_dssp HHHHHTTCCCCC-----CCCCCTTCEEEEECCSHHHHHHHHHH-HHHTCEEEEECSSCCCTT--------------C---
T ss_pred hhHhhhcccccC-----CceeeecchheeeccCchhHHHHHHH-HhhCcEEEEEeccccccc--------------c---
Confidence 999999988532 12689999999999999999999997 799999999999864310 0
Q ss_pred ccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCC
Q 020301 222 VTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (328)
Q Consensus 222 ~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~ 301 (328)
.....++++++++||+|++|+|+|++|+++|+++.|+.||+|++|||+|||+++|++||++||++|++.||+||||++
T Consensus 161 --~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~ 238 (290)
T 3gvx_A 161 --DVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWN 238 (290)
T ss_dssp --SEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTT
T ss_pred --ccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccC
Confidence 123459999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCeEEcCCCC-CCCc
Q 020301 302 EPYMKPGLSEMKNAIVVPHIA-SASK 326 (328)
Q Consensus 302 EP~~~~~L~~~~nvilTPHia-~~t~ 326 (328)
||+ +|||++|||++|||+| ++|.
T Consensus 239 EP~--~pL~~~~nvilTPHiag~~t~ 262 (290)
T 3gvx_A 239 EPE--ITETNLRNAILSPHVAGGMSG 262 (290)
T ss_dssp TTS--CCSCCCSSEEECCSCSSCBTT
T ss_pred Ccc--cchhhhhhhhcCccccCCccc
Confidence 998 8999999999999999 7764
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7e-56 Score=426.23 Aligned_cols=256 Identities=28% Similarity=0.432 Sum_probs=220.9
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEccc
Q 020301 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (328)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~ 95 (328)
|||+++..++.. .+.+++.+ ++...... ..+.+++ . ++|+++++..+++++++++ +|++ |+|++.|+
T Consensus 1 mkil~~~~~~~~--~~~~~~~~-~v~~~~~~--~~~~~~l----~-~ad~li~~~~~~~~~~~l~-~~~L--k~I~~~~~ 67 (380)
T 2o4c_A 1 MRILADENIPVV--DAFFADQG-SIRRLPGR--AIDRAAL----A-EVDVLLVRSVTEVSRAALA-GSPV--RFVGTCTI 67 (380)
T ss_dssp CEEEEETTCTTH--HHHHGGGS-EEEEECGG--GCSTTTT----T-TCSEEEECTTSCBCHHHHT-TSCC--CEEEECSS
T ss_pred CEEEEecCchHH--HHHHHhCC-cEEEecCC--cCChHHH----C-CcEEEEEcCCCCCCHHHhc-CCCc--eEEEEcCc
Confidence 588888877652 46666554 55544321 2233332 3 7999999877789999998 8877 99999999
Q ss_pred cCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH
Q 020301 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (328)
Q Consensus 96 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~ 175 (328)
|+|+||+++++++||.|+|+||+|+.+||||++++||++.|++ +.++.|+|+||||+|+
T Consensus 68 G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~---------------------~~~l~g~tvGIIGlG~ 126 (380)
T 2o4c_A 68 GTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR---------------------GADLAERTYGVVGAGQ 126 (380)
T ss_dssp CSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH---------------------TCCGGGCEEEEECCSH
T ss_pred ccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh---------------------hcccCCCEEEEEeCCH
Confidence 9999999999999999999999999999999999999999862 2479999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChh----hh
Q 020301 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT----TY 251 (328)
Q Consensus 176 IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~----t~ 251 (328)
||+++|+++ ++|||+|++|||+.... ..+ ....++++++++||+|++|+|++++ |+
T Consensus 127 IG~~vA~~l-~~~G~~V~~~d~~~~~~-------------~~g------~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 127 VGGRLVEVL-RGLGWKVLVCDPPRQAR-------------EPD------GEFVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp HHHHHHHHH-HHTTCEEEEECHHHHHH-------------STT------SCCCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred HHHHHHHHH-HHCCCEEEEEcCChhhh-------------ccC------cccCCHHHHHHhCCEEEEeccCccccccchh
Confidence 999999997 79999999999865321 001 1246899999999999999999999 99
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCCCCCCCc
Q 020301 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASK 326 (328)
Q Consensus 252 ~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~ 326 (328)
++++++.|++||+|++|||+|||+++|++||+++|++|+|.||+||||++||+++++|+. +||++|||+||+|.
T Consensus 187 ~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~-~nvi~TPHiag~t~ 260 (380)
T 2o4c_A 187 HLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAA-RCLIATPHIAGYSL 260 (380)
T ss_dssp TSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHT-TCSEECSSCTTCCH
T ss_pred hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhcc-CCEEEccccCcCCH
Confidence 999999999999999999999999999999999999999999999999999988888887 59999999999985
No 36
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=1.8e-35 Score=292.15 Aligned_cols=197 Identities=16% Similarity=0.212 Sum_probs=163.3
Q ss_pred CceEE-EccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCC
Q 020301 87 GKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (328)
Q Consensus 87 ~k~i~-~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g 165 (328)
++.|+ ..++|+|++ ++++++||.|+|+|++|. +|||+ +.|++....+.+++| |. ...+.++.|
T Consensus 214 l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g-w~-----~~~g~~L~G 277 (494)
T 3d64_A 214 IKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG-IK-----RATDVMIAG 277 (494)
T ss_dssp CCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH-HH-----HHHCCCCTT
T ss_pred cEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh-hh-----hccccccCC
Confidence 37887 789999998 789999999999999999 99994 347776666666665 42 134678999
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
+|+||||+|.||+.+|+++ ++|||+|++||+++....+.. ..| . ...++++++++||+|++|+
T Consensus 278 ktVgIIG~G~IG~~vA~~l-~~~G~~V~v~d~~~~~~~~a~---------~~G-----~-~~~~l~ell~~aDiVi~~~- 340 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSL-RGLGATVWVTEIDPICALQAA---------MEG-----Y-RVVTMEYAADKADIFVTAT- 340 (494)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTTTCEEEEECSCHHHHHHHH---------TTT-----C-EECCHHHHTTTCSEEEECS-
T ss_pred CEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCChHhHHHHH---------HcC-----C-EeCCHHHHHhcCCEEEECC-
Confidence 9999999999999999996 799999999999876432211 111 1 2368999999999999997
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCccEEEEeCCCCCCCC-CCCcccC--CCeEEcCCC
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEM--KNAIVVPHI 321 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~--~nvilTPHi 321 (328)
+|+++|+++.|++||+|++|||+|||++ ||+++| +||++|+|+ +++|| ||++ ++|||.+ |||++| |+
T Consensus 341 ---~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~ 411 (494)
T 3d64_A 341 ---GNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GC 411 (494)
T ss_dssp ---SSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HT
T ss_pred ---CcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eC
Confidence 7899999999999999999999999999 699999 999999987 55555 5654 4789988 999999 99
Q ss_pred C-CCC
Q 020301 322 A-SAS 325 (328)
Q Consensus 322 a-~~t 325 (328)
| +.|
T Consensus 412 atg~~ 416 (494)
T 3d64_A 412 ATGHP 416 (494)
T ss_dssp SCCSC
T ss_pred cCCCC
Confidence 9 544
No 37
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=3.3e-35 Score=289.23 Aligned_cols=200 Identities=15% Similarity=0.160 Sum_probs=170.6
Q ss_pred CCceEE-EccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccC
Q 020301 86 GGKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLK 164 (328)
Q Consensus 86 ~~k~i~-~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~ 164 (328)
+++.|+ ..++|+|++ +++.++||.++|+|++|. +||| ++.|++....+.+++| |.+ ..+.++.
T Consensus 193 ~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r-----~~~~~l~ 256 (479)
T 1v8b_A 193 KIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR-----ATDFLIS 256 (479)
T ss_dssp TCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH-----HHCCCCT
T ss_pred CeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh-----ccccccC
Confidence 348888 789999998 789999999999999999 9999 4568888888888888 632 3457899
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
|+|+||||+|.||+.+|+++ ++|||+|++||+++....+. ...+ + ...++++++++||+|++|+
T Consensus 257 GktVgIIG~G~IG~~vA~~l-~~~G~~Viv~d~~~~~~~~a---------~~~g-----~-~~~~l~ell~~aDiVi~~~ 320 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSM-KGLGARVYITEIDPICAIQA---------VMEG-----F-NVVTLDEIVDKGDFFITCT 320 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHH-HHHTCEEEEECSCHHHHHHH---------HTTT-----C-EECCHHHHTTTCSEEEECC
T ss_pred CCEEEEEeeCHHHHHHHHHH-HhCcCEEEEEeCChhhHHHH---------HHcC-----C-EecCHHHHHhcCCEEEECC
Confidence 99999999999999999996 79999999999987643221 0112 1 2368999999999999994
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH--HHHcCCccEEEEeCCCCCCCCCCCcccC--CCeEEcC
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE--HLKQNPMFRVGLDVFEDEPYMKPGLSEM--KNAIVVP 319 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~--aL~~g~i~gaalDV~~~EP~~~~~L~~~--~nvilTP 319 (328)
+|+++|+++.|++||+|++|||+|||++ ||+++|.+ ||++|+|+ +++|||+.++ ++|||.+ |||++|
T Consensus 321 ----~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~--~~~l~~l~~~nvv~t- 392 (479)
T 1v8b_A 321 ----GNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPN--GNKIIVLARGRLLNL- 392 (479)
T ss_dssp ----SSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTT--SCEEEEEGGGSBHHH-
T ss_pred ----ChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCC--CCeeeEecCCCEEEE-
Confidence 8899999999999999999999999999 99999999 99999998 9999984422 5789888 999999
Q ss_pred CCC-CCC
Q 020301 320 HIA-SAS 325 (328)
Q Consensus 320 Hia-~~t 325 (328)
|+| +.+
T Consensus 393 H~atghp 399 (479)
T 1v8b_A 393 GCATGHP 399 (479)
T ss_dssp HSSCCSC
T ss_pred eccCCCC
Confidence 999 543
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.96 E-value=6.2e-30 Score=238.55 Aligned_cols=215 Identities=15% Similarity=0.095 Sum_probs=166.4
Q ss_pred CCeEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCC------CCHHHHHHHhcCCccEEEec----------------C
Q 020301 14 GKYRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTI------LSVEDIIALIGDKCDGVIGQ----------------L 70 (328)
Q Consensus 14 ~~~~vlv~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~------~~~e~~~~~~~~~~d~li~~----------------~ 70 (328)
.+|||++...... ..+.+.|.+.++++.+...++.. ...+++.+.+. ++|++++. .
T Consensus 4 ~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 4 TGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWN-TVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp TTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGG-GCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred cCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHh-cCCEEEeccccccCCceeecccccC
Confidence 4678888764332 24567888889998765432211 12244555555 69999874 2
Q ss_pred CCCccHHHHHHhhccCCceEEEccccCCccCh-hHHHhCCceEecCC------CCCCchHHHHHHHHHHHHHhcHHHHHH
Q 020301 71 TEDWGETLFAALSRAGGKAFSNMAVGYNNVDV-NAANKYGIAVGNTP------GVLTETTAELAASLSLAAARRIVEADE 143 (328)
Q Consensus 71 ~~~~~~~~l~~~~~l~~k~i~~~g~G~d~id~-~~~~~~gI~v~n~p------~~~~~~vAE~al~~~L~~~R~~~~~~~ 143 (328)
..++++++++++|++ |+|. +|+|++|+ ++++++||.|+|+| ++++.+|||++++++|..
T Consensus 83 ~~~~~~~~l~~~~~l--~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~--------- 148 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNH--CVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH--------- 148 (293)
T ss_dssp CCBCCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred CccchHHHHHhCCCC--CEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh---------
Confidence 346889999999987 8886 79999998 89999999999998 889999999999998852
Q ss_pred HHHcCCCCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcc
Q 020301 144 FMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT 223 (328)
Q Consensus 144 ~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (328)
.+.++.|+|+||||+|.||+.+|+++ ++|||+|++|||+..+.. . ...+ +..
T Consensus 149 ---------------~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~dr~~~~~~-~-~~~~-------g~~--- 200 (293)
T 3d4o_A 149 ---------------TDFTIHGANVAVLGLGRVGMSVARKF-AALGAKVKVGARESDLLA-R-IAEM-------GME--- 200 (293)
T ss_dssp ---------------CSSCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHHH-H-HHHT-------TSE---
T ss_pred ---------------cCCCCCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEECCHHHHH-H-HHHC-------CCe---
Confidence 13579999999999999999999996 799999999999875421 1 1111 211
Q ss_pred ccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc
Q 020301 224 WKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (328)
Q Consensus 224 ~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~ 276 (328)
.....++++++++||+|++|+|+ ++++++.|+.||+|+++||++||+.
T Consensus 201 ~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 201 PFHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EEEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred ecChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 11125789999999999999995 7899999999999999999999764
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.94 E-value=1.4e-26 Score=216.56 Aligned_cols=221 Identities=15% Similarity=0.097 Sum_probs=159.9
Q ss_pred CCeEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCCC------CHHHHHHHhcCCccEEEec---C-----------CC
Q 020301 14 GKYRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTIL------SVEDIIALIGDKCDGVIGQ---L-----------TE 72 (328)
Q Consensus 14 ~~~~vlv~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~------~~e~~~~~~~~~~d~li~~---~-----------~~ 72 (328)
+.|||++...... ..+.+.|.+.++++.+...++... ..+++.+.+. ++|+++.. . ..
T Consensus 6 ~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 6 TGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQ-QIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGG-GCSEEECCSSCEETTTEECBSSCSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHh-cCCEEEeccccccCCcccccccccC
Confidence 4678988765332 245677888899887654332211 1123444454 69999871 1 24
Q ss_pred C--ccHHHHHHhhccCCceEEEccccCCccC-hhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCC
Q 020301 73 D--WGETLFAALSRAGGKAFSNMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGL 149 (328)
Q Consensus 73 ~--~~~~~l~~~~~l~~k~i~~~g~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~ 149 (328)
+ +++++++++|++ |+|+ +|+|++| +++|+++||.|+|+|+++ ++ ++.|++... +|.
T Consensus 85 ~~~~~~~~l~~~~~l--~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~ 143 (300)
T 2rir_A 85 EVVLKQDHLDRTPAH--CVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGT 143 (300)
T ss_dssp CEECCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHH
T ss_pred CccchHHHHhhcCCC--CEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHH
Confidence 5 789999999987 8877 8999999 999999999999999974 33 345666443 333
Q ss_pred CCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC
Q 020301 150 YDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (328)
Q Consensus 150 w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (328)
|.. . ....+.++.|+|+||||+|.||+.+|+++ ++||++|++|||+.... +. .. +.+. ......+
T Consensus 144 ~~~-~-~~~~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~d~~~~~~-~~-~~-------~~g~---~~~~~~~ 208 (300)
T 2rir_A 144 IML-A-IQHTDYTIHGSQVAVLGLGRTGMTIARTF-AALGANVKVGARSSAHL-AR-IT-------EMGL---VPFHTDE 208 (300)
T ss_dssp HHH-H-HHTCSSCSTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHH-HH-HH-------HTTC---EEEEGGG
T ss_pred HHH-H-HHhcCCCCCCCEEEEEcccHHHHHHHHHH-HHCCCEEEEEECCHHHH-HH-HH-------HCCC---eEEchhh
Confidence 421 0 01235789999999999999999999997 79999999999987532 11 11 1121 1112357
Q ss_pred HHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc
Q 020301 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (328)
Q Consensus 230 l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~ 276 (328)
+++++++||+|++|+|+ ++++++.|+.||+|+++||++||+.
T Consensus 209 l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 209 LKEHVKDIDICINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp HHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred HHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 99999999999999996 7899999999999999999999854
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.91 E-value=1.4e-23 Score=202.29 Aligned_cols=251 Identities=16% Similarity=0.157 Sum_probs=175.0
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHH-----------HHhcCCccEEEecCCCCccHHHHHHhhccCCceEEEccc
Q 020301 29 WINLLIEQDCRVEICTQK--KTILSVEDII-----------ALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (328)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~e~~~-----------~~~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~ 95 (328)
..+.|.+.|++|.+.... ...++.++.. +.+. ++|+| +...++.++++....+. ..++.....
T Consensus 22 ~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~-~adii-~~vk~p~~~e~~~l~~~--~~l~~~~~~ 97 (377)
T 2vhw_A 22 GVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWA-DADLL-LKVKEPIAAEYGRLRHG--QILFTFLHL 97 (377)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHH-HCSEE-ECSSCCCGGGGGGCCTT--CEEEECCCG
T ss_pred HHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhc-cCCEE-EEeCCCChHHHhhcCCC--CEEEEEecc
Confidence 457787788888653322 1345666655 2222 47866 44455666655443443 256666677
Q ss_pred cCCccChhHHHhCCceEe----------cCCCCCCchHHHHHHHHHHHHH-hcHHHHHHHHHcCCCCCCCCCcccccccC
Q 020301 96 GYNNVDVNAANKYGIAVG----------NTPGVLTETTAELAASLSLAAA-RRIVEADEFMRAGLYDGWLPNLFVGNLLK 164 (328)
Q Consensus 96 G~d~id~~~~~~~gI~v~----------n~p~~~~~~vAE~al~~~L~~~-R~~~~~~~~~~~g~w~~w~~~~~~~~~l~ 164 (328)
++|.-.++++.++||.+. |.|.++ ++||++..+++.+. |++. ..+.|+|..|.. ..++.
T Consensus 98 ~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s--~~ae~ag~~a~~~a~r~l~----~~~~g~~~~~~~----~~~l~ 167 (377)
T 2vhw_A 98 AASRACTDALLDSGTTSIAYETVQTADGALPLLA--PMSEVAGRLAAQVGAYHLM----RTQGGRGVLMGG----VPGVE 167 (377)
T ss_dssp GGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTH--HHHHHHHHHHHHHHHHHTS----GGGTSCCCCTTC----BTTBC
T ss_pred cCCHHHHHHHHHcCCeEEEeeeccccCCCccccC--chHHHHHHHHHHHHHHHHH----HhcCCCcccccC----CCCCC
Confidence 888888999999999997 566654 56799985555554 6662 344555432221 13799
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCC-ccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ell~~aDiV~l~ 243 (328)
|++++|+|+|.||+.+|+.+ +++|++|+++|+++... +...+.+ +... .......+++++++++|+|+.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a-~~~Ga~V~~~d~~~~~l-~~~~~~~-------g~~~~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIA-NGMGATVTVLDINIDKL-RQLDAEF-------CGRIHTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHT-------TTSSEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHHhc-------CCeeEeccCCHHHHHHHHcCCCEEEEC
Confidence 99999999999999999996 79999999999987542 1111111 1110 0001123678899999999996
Q ss_pred C--CCChhhhccccHHHHhcCCCCcEEEEcC--CCcccCHHHHHHHHHcCCccEEEEeCCCC-CCCC-CCCcccCCCeE-
Q 020301 244 P--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDEVALVEHLKQNPMFRVGLDVFED-EPYM-KPGLSEMKNAI- 316 (328)
Q Consensus 244 ~--plt~~t~~li~~~~~~~mk~ga~lIN~a--RG~~vde~aL~~aL~~g~i~gaalDV~~~-EP~~-~~~L~~~~nvi- 316 (328)
+ |.+ +|.++++++.++.||+|+++||++ +|+ ||+. ||.+ ++|++.++||+
T Consensus 239 ~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i 295 (377)
T 2vhw_A 239 VLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLF 295 (377)
T ss_dssp CCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEE
T ss_pred CCcCCC-CCcceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEE
Confidence 6 655 789999999999999999999998 332 7888 8864 56899999999
Q ss_pred -EcCCCCCCC
Q 020301 317 -VVPHIASAS 325 (328)
Q Consensus 317 -lTPHia~~t 325 (328)
+|||+++.+
T Consensus 296 ~~~phl~~~~ 305 (377)
T 2vhw_A 296 YCVANMPASV 305 (377)
T ss_dssp ECBTTGGGGS
T ss_pred EecCCcchhh
Confidence 999999976
No 41
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.90 E-value=3e-25 Score=219.74 Aligned_cols=200 Identities=16% Similarity=0.120 Sum_probs=156.6
Q ss_pred ceE-EEccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCC
Q 020301 88 KAF-SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQ 166 (328)
Q Consensus 88 k~i-~~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~ 166 (328)
+.+ ...|+|+|++ .++.++||.++|++++|. +|||+ ..|++....+.+..+ |.. ..+..+.|+
T Consensus 212 ~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g----~~r--~~~~~l~Gk 275 (494)
T 3ce6_A 212 KGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG----INR--GTDALIGGK 275 (494)
T ss_dssp CCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH----HHH--HHCCCCTTC
T ss_pred EEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH----HHh--ccCCCCCcC
Confidence 444 4789999998 678899999999999999 99994 345555444444433 321 123478999
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~pl 246 (328)
+|+|+|+|.||+.+|+++ ++||++|+++|+++..... +...|. ...+++++++++|+|+.|++
T Consensus 276 tV~IiG~G~IG~~~A~~l-ka~Ga~Viv~d~~~~~~~~---------A~~~Ga------~~~~l~e~l~~aDvVi~atg- 338 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAM-KGQGARVSVTEIDPINALQ---------AMMEGF------DVVTVEEAIGDADIVVTATG- 338 (494)
T ss_dssp EEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHH---------HHHTTC------EECCHHHHGGGCSEEEECSS-
T ss_pred EEEEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH---------HHHcCC------EEecHHHHHhCCCEEEECCC-
Confidence 999999999999999996 7999999999998754211 111222 13578999999999999974
Q ss_pred ChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH-HHHcCCccEEEEeCCCCCCCCCC--CcccCCCeE----Ec
Q 020301 247 DKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE-HLKQNPMFRVGLDVFEDEPYMKP--GLSEMKNAI----VV 318 (328)
Q Consensus 247 t~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~-aL~~g~i~gaalDV~~~EP~~~~--~L~~~~nvi----lT 318 (328)
+.++++.+.|+.||+|++++|++|++. ||+++|.+ +|++++|. +++|+|+.++. .+ .|+..+|++ +|
T Consensus 339 ---t~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~-~~~l~LL~~grlvnL~~~T 413 (494)
T 3ce6_A 339 ---NKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT-GRSIIVLSEGRLLNLGNAT 413 (494)
T ss_dssp ---SSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT-CCEEEEEGGGSCHHHHHSC
T ss_pred ---CHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc-chHHHHHhCCCEEeccCCC
Confidence 567899999999999999999999999 99999999 89888887 67899876442 33 367788998 99
Q ss_pred CCCCCCC
Q 020301 319 PHIASAS 325 (328)
Q Consensus 319 PHia~~t 325 (328)
||+++.+
T Consensus 414 PH~a~~~ 420 (494)
T 3ce6_A 414 GHPSFVM 420 (494)
T ss_dssp CSCHHHH
T ss_pred CCccccc
Confidence 9997643
No 42
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.81 E-value=8.1e-22 Score=191.71 Aligned_cols=131 Identities=22% Similarity=0.297 Sum_probs=106.2
Q ss_pred ccc-cCCCEEEEEecCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcC
Q 020301 160 GNL-LKGQTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (328)
Q Consensus 160 ~~~-l~g~tvgIiG~G~IG~~vA~~l~~~-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (328)
|.+ |.|+|+||+|+|+||+.+|+++ ++ |||+|++|++..... | .....+++++++.+
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l-~~~~G~kVv~~sD~~g~~-------~-------------~~~gvdl~~L~~~~ 264 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIM-SEDFGMKVVAVSDSKGGI-------Y-------------NPDGLNADEVLKWK 264 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEE-------E-------------EEEEECHHHHHHHH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHH-HHhcCCEEEEEeCCCccc-------c-------------CccCCCHHHHHHHH
Confidence 356 9999999999999999999997 78 999999995332110 0 00113677887766
Q ss_pred CE-EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCC--CCcccCCC
Q 020301 238 DV-ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK--PGLSEMKN 314 (328)
Q Consensus 238 Di-V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~--~~L~~~~n 314 (328)
|. .++ +|+ ++|++ |+.+.|..||+ .+|||+|||.+||+++ +++|+.+.|++++ +||++. ++|++++|
T Consensus 265 d~~~~l-~~l-~~t~~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~ 334 (419)
T 1gtm_A 265 NEHGSV-KDF-PGATN-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKG 334 (419)
T ss_dssp HHHSSS-TTC-TTSEE-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTT
T ss_pred HhcCEe-ecC-ccCee-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCC
Confidence 54 333 576 68889 89999999998 5999999999999999 6999999999988 899753 58999999
Q ss_pred eEEcCCC
Q 020301 315 AIVVPHI 321 (328)
Q Consensus 315 vilTPHi 321 (328)
|++|||+
T Consensus 335 V~itPhi 341 (419)
T 1gtm_A 335 ILQIPDF 341 (419)
T ss_dssp CEEECHH
T ss_pred EEEECch
Confidence 9999999
No 43
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.79 E-value=5.7e-19 Score=171.22 Aligned_cols=156 Identities=19% Similarity=0.262 Sum_probs=115.0
Q ss_pred ccccCCccC-hhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEE
Q 020301 93 MAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (328)
Q Consensus 93 ~g~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIi 171 (328)
.++|+..+. +..+.+.+|+|.|.+.. +.++..-........+.... .+. .+.++.|+|+||+
T Consensus 155 TttGv~rL~~~~~~g~L~iPVinvnds----vtk~~~Dn~~Gt~~slldgi--~ra-----------tg~~L~GktVgIi 217 (436)
T 3h9u_A 155 TTTGVKNLYKRLQRGKLTIPAMNVNDS----VTKSKFDNLYGCRESLVDGI--KRA-----------TDVMIAGKTACVC 217 (436)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTTS----HHHHTTHHHHHHHHHHHHHH--HHH-----------HCCCCTTCEEEEE
T ss_pred cCcChHHHHHHHHcCCCCCceEeechh----hhhhhhhccccchHHHHHHH--HHh-----------cCCcccCCEEEEE
Confidence 456665442 33455789999999864 44444433333333222111 111 2367999999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhh
Q 020301 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (328)
Q Consensus 172 G~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~ 251 (328)
|+|.||+.+|+++ ++|||+|++||+++....+.. ..|. ...++++++++||+|++ ++.|+
T Consensus 218 G~G~IG~~vA~~L-ka~Ga~Viv~D~~p~~a~~A~---------~~G~------~~~sL~eal~~ADVVil----t~gt~ 277 (436)
T 3h9u_A 218 GYGDVGKGCAAAL-RGFGARVVVTEVDPINALQAA---------MEGY------QVLLVEDVVEEAHIFVT----TTGND 277 (436)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHH---------HTTC------EECCHHHHTTTCSEEEE----CSSCS
T ss_pred eeCHHHHHHHHHH-HHCCCEEEEECCChhhhHHHH---------HhCC------eecCHHHHHhhCCEEEE----CCCCc
Confidence 9999999999996 799999999999875432211 1121 23699999999999996 46789
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHH
Q 020301 252 HLINKERLATMKKEAILVNCSRGPV-IDEVALVEH 285 (328)
Q Consensus 252 ~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~a 285 (328)
++|+++.|++||+|++|||+|||++ ||.++|.+.
T Consensus 278 ~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 278 DIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp CSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred CccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 9999999999999999999999997 999999874
No 44
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.77 E-value=1.5e-18 Score=168.36 Aligned_cols=230 Identities=15% Similarity=0.168 Sum_probs=152.8
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHHHH---------hcCCccEEEecCCCCccHHHHHHhhccCCceEEEccccC
Q 020301 29 WINLLIEQDCRVEICTQK--KTILSVEDIIAL---------IGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGY 97 (328)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~e~~~~~---------~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~G~ 97 (328)
..+.|.+.|++|.+.... ...++.++..+. +- .+|+++.. .++ .++.++.++. +.+++...+.|+
T Consensus 29 ~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~-~adiil~v-k~p-~~~~i~~l~~-~~~li~~~~~~~ 104 (401)
T 1x13_A 29 TVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVW-QSEIILKV-NAP-LDDEIALLNP-GTTLVSFIWPAQ 104 (401)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGG-SSSEEECS-SCC-CHHHHTTCCT-TCEEEECCCGGG
T ss_pred HHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHh-cCCeEEEe-CCC-CHHHHHHhcC-CCcEEEEecCCC
Confidence 457787889888764332 124677777643 32 48887753 333 4666777632 349999999999
Q ss_pred CccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHH--HHHHHHcCCC--CCCCCCc--ccccccCCCEEEEE
Q 020301 98 NNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVE--ADEFMRAGLY--DGWLPNL--FVGNLLKGQTVGVI 171 (328)
Q Consensus 98 d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~--~~~~~~~g~w--~~w~~~~--~~~~~l~g~tvgIi 171 (328)
|++|++++.++||.+.+ .++|+|++.++.|.+++.+.. ....++.+.| ..|.... ..| ++.|++|+|+
T Consensus 105 d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g-~l~g~~V~Vi 178 (401)
T 1x13_A 105 NPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAG-KVPPAKVMVI 178 (401)
T ss_dssp CHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTE-EECCCEEEEE
T ss_pred CHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeecc-CcCCCEEEEE
Confidence 99999999999999964 455566555553322222222 1223333332 2222110 011 5889999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcc------------c----cc------cCC
Q 020301 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT------------W----KR------ASS 229 (328)
Q Consensus 172 G~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~----~~------~~~ 229 (328)
|+|.||+.+++.+ +++|++|+++|+++... +. ...+ |..... . .. ..+
T Consensus 179 GaG~iG~~aa~~a-~~~Ga~V~v~D~~~~~~-~~-~~~l-------Ga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 179 GAGVAGLAAIGAA-NSLGAIVRAFDTRPEVK-EQ-VQSM-------GAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSCGGGH-HH-HHHT-------TCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH-HHCCCEEEEEcCCHHHH-HH-HHHc-------CCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 9999999999996 79999999999987532 11 1111 111000 0 00 014
Q ss_pred HHHHhhcCCEEEEc--CCCChhhhccccHHHHhcCCCCcEEEEcC--CCcccCH
Q 020301 230 MDEVLREADVISLH--PVLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (328)
Q Consensus 230 l~ell~~aDiV~l~--~plt~~t~~li~~~~~~~mk~ga~lIN~a--RG~~vde 279 (328)
++++++++|+|+.| +|. ..+.++++++.++.||+|+++||+| ||+.+++
T Consensus 249 l~e~~~~aDvVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHHCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHhCCCCEEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 78889999999999 553 3467899999999999999999999 9988876
No 45
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.77 E-value=5.2e-18 Score=162.81 Aligned_cols=255 Identities=15% Similarity=0.185 Sum_probs=154.3
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHHHH---------hcCCccEEEecCCCCccHHHHHHhhccCCceEEEccccC
Q 020301 29 WINLLIEQDCRVEICTQK--KTILSVEDIIAL---------IGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGY 97 (328)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~e~~~~~---------~~~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~G~ 97 (328)
..+.|.+.|+++.+.... ...++.++..+. +- ++|+|+ ...++..++ ++.++. +.+++.....+.
T Consensus 22 ~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il-~vk~p~~~~-~~~l~~-~~~~~~~~~~~~ 97 (369)
T 2eez_A 22 GVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVV-KVKEPLPEE-YGFLRE-GLILFTYLHLAA 97 (369)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEE-CSSCCCGGG-GGGCCT-TCEEEECCCGGG
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEE-EECCCCHHH-HhhcCC-CcEEEEEecccC
Confidence 467788889988664322 135677777641 21 588876 444455444 555532 348888888899
Q ss_pred CccChhHHHhCCceEe---cCCCC-CC----chHHHHHH--HHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCE
Q 020301 98 NNVDVNAANKYGIAVG---NTPGV-LT----ETTAELAA--SLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQT 167 (328)
Q Consensus 98 d~id~~~~~~~gI~v~---n~p~~-~~----~~vAE~al--~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~t 167 (328)
|..+++++.++||.+. +.+.. .. .++++.+- +.++++ +.+... ..|+. -|... ..++.+++
T Consensus 98 ~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~-~~l~~~----~~g~~-~~~~~---~~~l~~~~ 168 (369)
T 2eez_A 98 DRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGA-QFLEKP----KGGRG-VLLGG---VPGVAPAS 168 (369)
T ss_dssp CHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHH-HHTSGG----GTSCC-CCTTC---BTBBCCCE
T ss_pred CHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHH-HHHHHh----cCCCc-eecCC---CCCCCCCE
Confidence 9999999999999997 44442 11 34455443 333322 222211 11210 11111 14699999
Q ss_pred EEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCC-ccccccCCHHHHhhcCCEEEEcCCC
Q 020301 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSMDEVLREADVISLHPVL 246 (328)
Q Consensus 168 vgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ell~~aDiV~l~~pl 246 (328)
++|+|.|.||+.+|+.+ +++|++|+++|+++... +...+.+ +..- .......+++++++++|+|+.|++.
T Consensus 169 V~ViGaG~iG~~~a~~l-~~~Ga~V~~~d~~~~~~-~~~~~~~-------g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 169 VVILGGGTVGTNAAKIA-LGMGAQVTILDVNHKRL-QYLDDVF-------GGRVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp EEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHT-------TTSEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred EEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHHhc-------CceEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 99999999999999996 79999999999987532 1111111 1110 0001124677889999999999997
Q ss_pred Ch-hhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCC-CCCCcccCCCeE--------
Q 020301 247 DK-TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAI-------- 316 (328)
Q Consensus 247 t~-~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~-~~~~L~~~~nvi-------- 316 (328)
+. .+..++.++.++.||+|+++||++-. .| |+ +||+ ||. .++|++..+|+.
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp 300 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMP 300 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSG
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcc
Confidence 66 68899999999999999999999821 22 44 9998 664 356888899999
Q ss_pred -EcCCCCCC
Q 020301 317 -VVPHIASA 324 (328)
Q Consensus 317 -lTPHia~~ 324 (328)
.|||+|+.
T Consensus 301 ~~~p~~as~ 309 (369)
T 2eez_A 301 GAVPRTSTF 309 (369)
T ss_dssp GGSHHHHHH
T ss_pred hhcHHHHHH
Confidence 88998764
No 46
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.76 E-value=2.8e-18 Score=166.27 Aligned_cols=155 Identities=16% Similarity=0.222 Sum_probs=113.2
Q ss_pred ccccCCccC-hhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEE
Q 020301 93 MAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (328)
Q Consensus 93 ~g~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIi 171 (328)
.++|+-.+- ........+++.|+.. ++..+-+-....+.+.+.... .|. .+.++.|||+||+
T Consensus 191 TtTGv~rL~~m~~~g~L~~PvinVnd----s~tK~~fDn~yG~~eslvdgI--~Ra-----------tg~~L~GKTVgVI 253 (464)
T 3n58_A 191 TTTGVNRLYQLQKKGLLPFPAINVND----SVTKSKFDNKYGCKESLVDGI--RRG-----------TDVMMAGKVAVVC 253 (464)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHH--HHH-----------HCCCCTTCEEEEE
T ss_pred cccchHHHHHHHHcCCCCCCEEeecc----HhhhhhhhhhhcchHHHHHHH--HHh-----------cCCcccCCEEEEE
Confidence 566665432 2222345678888754 566665555555544443222 111 2468999999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhh
Q 020301 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (328)
Q Consensus 172 G~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~ 251 (328)
|+|.||+.+|+++ ++|||+|+++|+++....+.. ..| + ...++++++++||||+++. .|+
T Consensus 254 G~G~IGr~vA~~l-rafGa~Viv~d~dp~~a~~A~---------~~G-----~-~vv~LeElL~~ADIVv~at----gt~ 313 (464)
T 3n58_A 254 GYGDVGKGSAQSL-AGAGARVKVTEVDPICALQAA---------MDG-----F-EVVTLDDAASTADIVVTTT----GNK 313 (464)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSSHHHHHHHH---------HTT-----C-EECCHHHHGGGCSEEEECC----SSS
T ss_pred CcCHHHHHHHHHH-HHCCCEEEEEeCCcchhhHHH---------hcC-----c-eeccHHHHHhhCCEEEECC----CCc
Confidence 9999999999996 899999999998765432211 112 1 2368999999999999863 579
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH
Q 020301 252 HLINKERLATMKKEAILVNCSRGPV-IDEVALVE 284 (328)
Q Consensus 252 ~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~ 284 (328)
++|+++.|++||+|++|||++||++ ||.++|.+
T Consensus 314 ~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 314 DVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp SSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred cccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 9999999999999999999999998 99999974
No 47
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.74 E-value=3.3e-17 Score=158.03 Aligned_cols=240 Identities=15% Similarity=0.177 Sum_probs=149.1
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHH-----------HHhcCCccEEEecCCCCc----cHHHHHHhhccCCceEE
Q 020301 29 WINLLIEQDCRVEICTQKK--TILSVEDII-----------ALIGDKCDGVIGQLTEDW----GETLFAALSRAGGKAFS 91 (328)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~--~~~~~e~~~-----------~~~~~~~d~li~~~~~~~----~~~~l~~~~~l~~k~i~ 91 (328)
..+.|.+.|++|.+..... ..++.++.. +.+. ++|+++.. .+++ +++.++.++. +.++++
T Consensus 22 ~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~-~adiil~v-~~p~~~~~~~~~i~~l~~-~~~~i~ 98 (384)
T 1l7d_A 22 VVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALS-QADVVWKV-QRPMTAEEGTDEVALIKE-GAVLMC 98 (384)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHS-SCSEEEEE-ECCCCGGGSCCGGGGSCT-TCEEEE
T ss_pred HHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhc-CCCEEEEe-cCcccccCCHHHHHhhcc-CCEEEE
Confidence 3567777888886643221 245666655 3444 68988754 3454 5677777764 348888
Q ss_pred EccccCCccChhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCC--CCCCCcccc-cccCCCEE
Q 020301 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD--GWLPNLFVG-NLLKGQTV 168 (328)
Q Consensus 92 ~~g~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~--~w~~~~~~~-~~l~g~tv 168 (328)
....+.|+.+++++.++||.+++. +...+.+++..+. +|+..+.+ ..+..+..+.|. .|.+....+ .++.|++|
T Consensus 99 ~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V 175 (384)
T 1l7d_A 99 HLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGTVPPARV 175 (384)
T ss_dssp ECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEEECCCEE
T ss_pred EecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCCCCCCEE
Confidence 889999999999999999999974 2222222222332 22223322 222333333331 122211112 36899999
Q ss_pred EEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhh---cC----CCCCcccccc----------CCHH
Q 020301 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---AN----GEQPVTWKRA----------SSMD 231 (328)
Q Consensus 169 gIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~----------~~l~ 231 (328)
+|+|+|.||+.+++.+ +++|++|+++|+++... +. ...++.... .. +...-++... ..++
T Consensus 176 ~ViGaG~iG~~aa~~a-~~~Ga~V~~~d~~~~~~-~~-~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~ 252 (384)
T 1l7d_A 176 LVFGVGVAGLQAIATA-KRLGAVVMATDVRAATK-EQ-VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVL 252 (384)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECSCSTTH-HH-HHHTTCEECCC-----------------------CCHHHHHH
T ss_pred EEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH-HHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHH
Confidence 9999999999999996 79999999999986532 11 111221000 00 0000000000 1178
Q ss_pred HHhhcCCEEEEcC--CCChhhhccccHHHHhcCCCCcEEEEcC--CCcccC
Q 020301 232 EVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVID 278 (328)
Q Consensus 232 ell~~aDiV~l~~--plt~~t~~li~~~~~~~mk~ga~lIN~a--RG~~vd 278 (328)
++++++|+|+.|+ |.+ .+.++++++.++.||+|+++||++ ||+.++
T Consensus 253 ~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~~ 302 (384)
T 1l7d_A 253 KELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP 302 (384)
T ss_dssp HHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred HHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCee
Confidence 8899999999877 433 356789999999999999999999 887553
No 48
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.70 E-value=8.2e-17 Score=155.76 Aligned_cols=154 Identities=18% Similarity=0.310 Sum_probs=107.4
Q ss_pred ccccCCccC-hhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEE
Q 020301 93 MAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (328)
Q Consensus 93 ~g~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIi 171 (328)
.++|+-.+- +....+..++|.|.... +..+-+--.......+... ..+. .+..+.|++++|+
T Consensus 164 TttGv~rl~~~~~~g~L~~Pvi~vnds----~tK~~fDn~yGt~~s~~~g--i~ra-----------t~~~L~GktV~Vi 226 (435)
T 3gvp_A 164 SVTGVHRLYQLSKAGKLCVPAMNVNDS----VTKQKFDNLYCCRESILDG--LKRT-----------TDMMFGGKQVVVC 226 (435)
T ss_dssp CHHHHHHHTCC--CCCCCSCEEECTTC----HHHHHHHTHHHHHHHHHHH--HHHH-----------HCCCCTTCEEEEE
T ss_pred cchhHHHHHHHHHcCCCCCCEEEecch----hhhhhhhhhhhhHHHHHHH--HHHh-----------hCceecCCEEEEE
Confidence 455654432 22233567999988774 3333332222222222111 1111 2357999999999
Q ss_pred ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhh
Q 020301 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (328)
Q Consensus 172 G~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~ 251 (328)
|+|.||+.+|+++ ++|||+|+++|+++....+.. ..| + ...++++++++||+|++| +.|+
T Consensus 227 G~G~IGk~vA~~L-ra~Ga~Viv~D~dp~ra~~A~---------~~G-----~-~v~~Leeal~~ADIVi~a----tgt~ 286 (435)
T 3gvp_A 227 GYGEVGKGCCAAL-KAMGSIVYVTEIDPICALQAC---------MDG-----F-RLVKLNEVIRQVDIVITC----TGNK 286 (435)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHH---------HTT-----C-EECCHHHHTTTCSEEEEC----SSCS
T ss_pred eeCHHHHHHHHHH-HHCCCEEEEEeCChhhhHHHH---------HcC-----C-EeccHHHHHhcCCEEEEC----CCCc
Confidence 9999999999996 799999999999864322211 112 1 236899999999999995 5789
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHH
Q 020301 252 HLINKERLATMKKEAILVNCSRGPV-IDEVALV 283 (328)
Q Consensus 252 ~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~ 283 (328)
++|+++.|++||+|+++||+|||+. +|.++|.
T Consensus 287 ~lI~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 287 NVVTREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp CSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred ccCCHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 9999999999999999999999998 8887774
No 49
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.62 E-value=3.1e-17 Score=159.27 Aligned_cols=192 Identities=15% Similarity=0.237 Sum_probs=139.5
Q ss_pred ceEEEccccCCccChhHHH-----hCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCC-CCCCCcccc-
Q 020301 88 KAFSNMAVGYNNVDVNAAN-----KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD-GWLPNLFVG- 160 (328)
Q Consensus 88 k~i~~~g~G~d~id~~~~~-----~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~-~w~~~~~~~- 160 (328)
+.+...|+|+|++++..+. ++++.++|.+|. ..+++++.+..++.+.|++....... .+.|. .|.......
T Consensus 83 ~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~ 160 (404)
T 1gpj_A 83 RHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAER 160 (404)
T ss_dssp HHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHH
T ss_pred hhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHH
Confidence 6778889999999998887 889999999998 57899999999999999886543222 23221 110000001
Q ss_pred --cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcC
Q 020301 161 --NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (328)
Q Consensus 161 --~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (328)
.++.|++++|+|+|.||+.+++.+ +.+|+ +|+++||+.... ++....+ |.. .....++++++.++
T Consensus 161 ~~~~l~g~~VlIiGaG~iG~~~a~~l-~~~G~~~V~v~~r~~~ra-~~la~~~-------g~~---~~~~~~l~~~l~~a 228 (404)
T 1gpj_A 161 ELGSLHDKTVLVVGAGEMGKTVAKSL-VDRGVRAVLVANRTYERA-VELARDL-------GGE---AVRFDELVDHLARS 228 (404)
T ss_dssp HHSCCTTCEEEEESCCHHHHHHHHHH-HHHCCSEEEEECSSHHHH-HHHHHHH-------TCE---ECCGGGHHHHHHTC
T ss_pred HhccccCCEEEEEChHHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHc-------CCc---eecHHhHHHHhcCC
Confidence 147999999999999999999996 68999 999999987532 1222222 111 11124788889999
Q ss_pred CEEEEcCCCChhhhccccHHHHhc--CC----CCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCC-CCCCcc
Q 020301 238 DVISLHPVLDKTTYHLINKERLAT--MK----KEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLS 310 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~--mk----~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~-~~~~L~ 310 (328)
|+|+.|+| .+..+++.+.++. || ++.++||++ +|. .+++++
T Consensus 229 DvVi~at~---~~~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~ 276 (404)
T 1gpj_A 229 DVVVSATA---APHPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVE 276 (404)
T ss_dssp SEEEECCS---SSSCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGG
T ss_pred CEEEEccC---CCCceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCcccc
Confidence 99999976 4467788888887 43 566777775 365 367899
Q ss_pred cCCCeEE--cCCCCCCC
Q 020301 311 EMKNAIV--VPHIASAS 325 (328)
Q Consensus 311 ~~~nvil--TPHia~~t 325 (328)
++|||++ +||+++.+
T Consensus 277 ~l~~v~l~d~d~l~~~~ 293 (404)
T 1gpj_A 277 NIEDVEVRTIDDLRVIA 293 (404)
T ss_dssp GSTTEEEEEHHHHHHHH
T ss_pred ccCCeEEEeHhhHHHHH
Confidence 9999999 99987643
No 50
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.40 E-value=1.2e-12 Score=124.49 Aligned_cols=108 Identities=23% Similarity=0.304 Sum_probs=88.7
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-cCCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (328)
++.|||++|+|+|+||+.+|+++ ++|||+|+++|++... .++.+.| + . ...+++++++ .||++
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l-~~~GakVvvsD~~~~~--~~~a~~~-------g-----a-~~v~~~ell~~~~DIl 235 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLA-AEAGAQLLVADTDTER--VAHAVAL-------G-----H-TAVALEDVLSTPCDVF 235 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH--HHHHHHT-------T-----C-EECCGGGGGGCCCSEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEeCCccH--HHHHHhc-------C-----C-EEeChHHhhcCcccee
Confidence 79999999999999999999996 7999999999988643 2222222 1 1 2347788888 99999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
+.| .|.++|+++.++.|| ..+++|.+||++.+++| .++|+++.+.
T Consensus 236 iP~-----A~~~~I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 236 APC-----AMGGVITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp EEC-----SCSCCBCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred cHh-----HHHhhcCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 853 689999999999998 78999999999999888 5899988765
No 51
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.39 E-value=3.9e-11 Score=114.85 Aligned_cols=255 Identities=13% Similarity=0.111 Sum_probs=139.4
Q ss_pred CCCCCeEEEEeCCCCc--------hHHHHHHHhCCCeEEEecCCC--CCCCHHHHHHHhc-----CCccEEEecCCCCcc
Q 020301 11 NPNGKYRVVSTKPMPG--------TRWINLLIEQDCRVEICTQKK--TILSVEDIIALIG-----DKCDGVIGQLTEDWG 75 (328)
Q Consensus 11 ~~~~~~~vlv~~~~~~--------~~~~~~l~~~~~~~~~~~~~~--~~~~~e~~~~~~~-----~~~d~li~~~~~~~~ 75 (328)
.|-++|+|-|...... +...+.|.+.|++|.+..... ..++.++..+.=. +.+|.|+ ...+ .+
T Consensus 18 ~~~~~m~IgvpkE~~~~E~RValtP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIl-kVk~-p~ 95 (381)
T 3p2y_A 18 GPGSMTLIGVPRESAEGERRVALVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVV-KVNP-PT 95 (381)
T ss_dssp --CTTCEEEECCCCSTTCCCCSSCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEE-CSSC-CC
T ss_pred CCCcceEEEEEecCCCCCceecCCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEE-EeCC-CC
Confidence 4667788866433211 234677878899987654422 4577888765311 2356554 3332 34
Q ss_pred HHHHHHhhccCCceEEEc-cccCCccChhHHHhCCceEec---CCCCC-CchHHHHHHHHHHHHHhcHHHHHHHHHcCCC
Q 020301 76 ETLFAALSRAGGKAFSNM-AVGYNNVDVNAANKYGIAVGN---TPGVL-TETTAELAASLSLAAARRIVEADEFMRAGLY 150 (328)
Q Consensus 76 ~~~l~~~~~l~~k~i~~~-g~G~d~id~~~~~~~gI~v~n---~p~~~-~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w 150 (328)
++.++.++. | +.+..+ --..|.=-++++.++||...- .|... +.++ -++.-|=.++-+..-......-+..
T Consensus 96 ~~e~~~l~~-g-~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l--~~l~~~s~iAGy~Av~~aa~~l~~~ 171 (381)
T 3p2y_A 96 SDEISQLKP-G-SVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTM--DALSSQANVAGYKAVLLGASLSTRF 171 (381)
T ss_dssp HHHHTTSCT-T-CEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGG--CHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred hhHHhhccC-C-CEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccc--eeecchhHHHHHHHHHHHHHHhhhh
Confidence 455555654 2 444433 222232234667788988744 33211 1111 1111111111111111111111111
Q ss_pred CCCCCCccc-ccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc-----CCCCCc--
Q 020301 151 DGWLPNLFV-GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-----NGEQPV-- 222 (328)
Q Consensus 151 ~~w~~~~~~-~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~-- 222 (328)
.+.... -..+.+++|+|||+|.||..+|+.+ +++|++|++||+++... +. ...++..... .+....
T Consensus 172 ---~~~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l-~~-~~~lGa~~~~l~~~~~~~~gya~ 245 (381)
T 3p2y_A 172 ---VPMLTTAAGTVKPASALVLGVGVAGLQALATA-KRLGAKTTGYDVRPEVA-EQ-VRSVGAQWLDLGIDAAGEGGYAR 245 (381)
T ss_dssp ---SSCEECSSCEECCCEEEEESCSHHHHHHHHHH-HHHTCEEEEECSSGGGH-HH-HHHTTCEECCCC-----------
T ss_pred ---hhhhhcccCCcCCCEEEEECchHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH-HHHcCCeEEeccccccccccchh
Confidence 111111 1357899999999999999999996 79999999999997532 11 1112110000 000000
Q ss_pred ------cccccCCHHHHhhcCCEEEEcC--CCChhhhccccHHHHhcCCCCcEEEEcC--CCcccC
Q 020301 223 ------TWKRASSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVID 278 (328)
Q Consensus 223 ------~~~~~~~l~ell~~aDiV~l~~--plt~~t~~li~~~~~~~mk~ga~lIN~a--RG~~vd 278 (328)
......++++++++||+|+.++ |. ..+..+++++.++.||||+++||+| +|+.++
T Consensus 246 ~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 246 ELSEAERAQQQQALEDAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE 310 (381)
T ss_dssp --CHHHHHHHHHHHHHHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred hhhHHHHhhhHHHHHHHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence 0011236789999999998875 53 3467899999999999999999998 676655
No 52
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.34 E-value=1.4e-12 Score=121.88 Aligned_cols=118 Identities=12% Similarity=0.083 Sum_probs=91.7
Q ss_pred cccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCC
Q 020301 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (328)
Q Consensus 159 ~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (328)
.......++|||||+|.||+.+|+.| ...|.+|.+||+++... +.. ...| .....+++++++.||
T Consensus 15 ~~~~~~m~~I~iIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~-~~l--------~~~g-----~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 15 VPRGSHMMEVGFLGLGIMGKAMSMNL-LKNGFKVTVWNRTLSKC-DEL--------VEHG-----ASVCESPAEVIKKCK 79 (310)
T ss_dssp ---CCCSCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGG-HHH--------HHTT-----CEECSSHHHHHHHCS
T ss_pred CcccccCCEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHH-HHH--------HHCC-----CeEcCCHHHHHHhCC
Confidence 34556678999999999999999998 57799999999987542 111 1112 223468999999999
Q ss_pred EEEEcCCCChhhhccc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 239 VISLHPVLDKTTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 239 iV~l~~plt~~t~~li--~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
+|++|+|....++.++ .+..+..+++|.++||+++......+.+.+.+.+..+
T Consensus 80 vvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 134 (310)
T 3doj_A 80 YTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG 134 (310)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred EEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 9999999766777766 2556778999999999999998888999999887543
No 53
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.29 E-value=1.9e-11 Score=114.43 Aligned_cols=145 Identities=14% Similarity=0.044 Sum_probs=90.2
Q ss_pred HHHHHcCCCCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc-hhHHHHHHhhhhhhhhcCCC
Q 020301 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGE 219 (328)
Q Consensus 142 ~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~ 219 (328)
++..+.+.|.+|.+.... .....++|||||+|.||+.+|+.|+ ..|. +|++||+++ ....+.. ...|
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~I~iIG~G~mG~~~A~~L~-~~G~~~V~~~dr~~~~~~~~~~--------~~~g- 70 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLY-FQSNAMKLGFIGFGEAASAIASGLR-QAGAIDMAAYDAASAESWRPRA--------EELG- 70 (312)
T ss_dssp ------------------------CEEEEECCSHHHHHHHHHHH-HHSCCEEEEECSSCHHHHHHHH--------HHTT-
T ss_pred CcccccccccccCccccc-ccCCCCEEEEECccHHHHHHHHHHH-HCCCCeEEEEcCCCCHHHHHHH--------HHCC-
Confidence 345677778666543222 2344679999999999999999984 6688 999999973 2222211 1112
Q ss_pred CCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEe--
Q 020301 220 QPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD-- 297 (328)
Q Consensus 220 ~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalD-- 297 (328)
.....++++++++||+|++|+|...... .+ ++....++++.++||++........++.+.+.+..+....+|
T Consensus 71 ----~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~p 144 (312)
T 3qsg_A 71 ----VSCKASVAEVAGECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVA 144 (312)
T ss_dssp ----CEECSCHHHHHHHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ----CEEeCCHHHHHhcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEecc
Confidence 2234689999999999999999665544 33 667788999999999999999899999999887522223344
Q ss_pred CCCCCC
Q 020301 298 VFEDEP 303 (328)
Q Consensus 298 V~~~EP 303 (328)
|+-++|
T Consensus 145 v~g~~~ 150 (312)
T 3qsg_A 145 VMSAVK 150 (312)
T ss_dssp ECSCST
T ss_pred ccCCch
Confidence 454433
No 54
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.28 E-value=5.7e-12 Score=117.55 Aligned_cols=116 Identities=15% Similarity=0.138 Sum_probs=92.9
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
.++..++|||||+|.||+.+|+.| ...|.+|++||+++... +.. ...| .....++++++++||+|
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~-~~~--------~~~g-----~~~~~~~~e~~~~aDvV 69 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVL-LKQGKRVAIWNRSPGKA-AAL--------VAAG-----AHLCESVKAALSASPAT 69 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSHHHH-HHH--------HHHT-----CEECSSHHHHHHHSSEE
T ss_pred cccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHH--------HHCC-----CeecCCHHHHHhcCCEE
Confidence 356678999999999999999997 57899999999987542 111 1112 22346899999999999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
++|+|....++.++.++.+..+++|.++||++++...+.+.+.+.+++..+
T Consensus 70 i~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~ 120 (306)
T 3l6d_A 70 IFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGG 120 (306)
T ss_dssp EECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTC
T ss_pred EEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 999997777888886445677889999999999999999999999987544
No 55
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.26 E-value=5.8e-12 Score=117.43 Aligned_cols=115 Identities=20% Similarity=0.256 Sum_probs=93.4
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++||+||+|.||..+|++|+ .-|.+|.+|||++.+. +.+ ...| .....++.|+++.||+|++|+|
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~-~~G~~v~v~dr~~~~~-~~l--------~~~G-----a~~a~s~~e~~~~~dvv~~~l~ 68 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLL-KAGYLLNVFDLVQSAV-DGL--------VAAG-----ASAARSARDAVQGADVVISMLP 68 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSSHHHH-HHH--------HHTT-----CEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEeeehHHHHHHHHHHH-hCCCeEEEEcCCHHHH-HHH--------HHcC-----CEEcCCHHHHHhcCCceeecCC
Confidence 68999999999999999985 6799999999997542 221 1122 2345799999999999999999
Q ss_pred CChhhhcccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEe
Q 020301 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD 297 (328)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalD 297 (328)
..+..+.++. ...++.+++|.++||++....-+...+.+.+++..+ ..+|
T Consensus 69 ~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~--~~lD 120 (300)
T 3obb_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL--AMLD 120 (300)
T ss_dssp CHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC--EEEE
T ss_pred chHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC--EEEe
Confidence 8888888774 347889999999999999999999999999998654 3456
No 56
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.24 E-value=1.1e-11 Score=115.47 Aligned_cols=115 Identities=11% Similarity=0.133 Sum_probs=90.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++|||||+|.||..+|++|+ .-|.+|++|||++... ++ ....+.....++.|+++.||+|++|+|
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~-~~G~~V~v~dr~~~~~-~~-------------l~~~G~~~~~s~~e~~~~~dvvi~~l~ 70 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILL-EAGYELVVWNRTASKA-EP-------------LTKLGATVVENAIDAITPGGIVFSVLA 70 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEC--------CT-------------TTTTTCEECSSGGGGCCTTCEEEECCS
T ss_pred CcEEEEecHHHHHHHHHHHH-HCCCeEEEEeCCHHHH-HH-------------HHHcCCeEeCCHHHHHhcCCceeeecc
Confidence 57999999999999999985 6799999999987542 11 112233445789999999999999999
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEe
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD 297 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalD 297 (328)
..+..+..+....+..+++|.++|+.+....-+.+.+.+.+++..+. .+|
T Consensus 71 ~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~ld 120 (297)
T 4gbj_A 71 DDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVG 120 (297)
T ss_dssp SHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred chhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eec
Confidence 88888888888899999999999999999999999999999986554 455
No 57
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.24 E-value=1.2e-11 Score=116.06 Aligned_cols=116 Identities=14% Similarity=0.106 Sum_probs=92.5
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
....++|||||+|.||+.+|+.| ...|.+|++||+++... ++. ...| .....++++++++||+|+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~-~~l--------~~~g-----~~~~~~~~e~~~~aDvVi 92 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRL-CEAGYALQVWNRTPARA-ASL--------AALG-----ATIHEQARAAARDADIVV 92 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHH-HHTTCEEEEECSCHHHH-HHH--------HTTT-----CEEESSHHHHHTTCSEEE
T ss_pred ccCCCEEEEECccHHHHHHHHHH-HhCCCeEEEEcCCHHHH-HHH--------HHCC-----CEeeCCHHHHHhcCCEEE
Confidence 34567999999999999999997 57899999999987542 111 1112 233478999999999999
Q ss_pred EcCCCChhhhccccH-HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 242 LHPVLDKTTYHLINK-ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 242 l~~plt~~t~~li~~-~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
+|+|....++.++.. ..+..+++|.++||++++...+.+.+.+.+++..+.
T Consensus 93 ~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 93 SMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp ECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 999976777776643 677789999999999999999999999999876543
No 58
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.22 E-value=3.1e-11 Score=110.06 Aligned_cols=197 Identities=17% Similarity=0.120 Sum_probs=125.9
Q ss_pred HHHHHhCCCeEEEecCCCCCCCHHHHHHHhcC---CccEEEecCCCCccHHHHHHhhccCCceEEEccccCCccChhHHH
Q 020301 30 INLLIEQDCRVEICTQKKTILSVEDIIALIGD---KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (328)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~G~d~id~~~~~ 106 (328)
-..+++.|.+..+... ..+++++.+.+.. ...++.+. .+..++++..++++ +-+++...|+|.++.
T Consensus 21 ~~~~~~~g~~~~y~~~---~~~~~~l~~~i~~l~~~~~G~~vt--~P~k~~i~~~~~~l--~~~a~~~gavn~i~~---- 89 (263)
T 2d5c_A 21 AFALESLGLEGSYEAW---DTPLEALPGRLKEVRRAFRGVNLT--LPLKEAALAHLDWV--SPEAQRIGAVNTVLQ---- 89 (263)
T ss_dssp HHHHHHTTCCEEEEEE---ECCGGGHHHHHHHHHHHCSEEEEC--TTCTTGGGGGCSEE--CHHHHHHTCCCEEEE----
T ss_pred HHHHHHcCCCCEEEEE---eCCHHHHHHHHHhccccCceEEEc--ccCHHHHHHHHHHH--hHHHHHhCCCCcEEc----
Confidence 3567777877654432 1244555544431 24445544 35666777777765 555667778888865
Q ss_pred hCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHh
Q 020301 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (328)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~ 186 (328)
+.| +..|+|+.. .+++.++.| . +.++.| +++|||.|.+|+.+|+.| .
T Consensus 90 ~~g----~~~g~ntd~-----~g~~~~l~~----------~------------~~~l~~-~v~iiG~G~~g~~~a~~l-~ 136 (263)
T 2d5c_A 90 VEG----RLFGFNTDA-----PGFLEALKA----------G------------GIPLKG-PALVLGAGGAGRAVAFAL-R 136 (263)
T ss_dssp ETT----EEEEECCHH-----HHHHHHHHH----------T------------TCCCCS-CEEEECCSHHHHHHHHHH-H
T ss_pred cCC----eEEEeCCCH-----HHHHHHHHH----------h------------CCCCCC-eEEEECCcHHHHHHHHHH-H
Confidence 234 223455533 344444432 1 235789 999999999999999997 5
Q ss_pred cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCCh--hhhccccHHHHhcCCC
Q 020301 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK--TTYHLINKERLATMKK 264 (328)
Q Consensus 187 ~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~--~t~~li~~~~~~~mk~ 264 (328)
.+|++|.+|||+... .++..+.+ +. . ..+++++ +++|+|++|+|... ++...+. .+.+++
T Consensus 137 ~~g~~v~v~~r~~~~-~~~l~~~~-------~~-----~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~ 198 (263)
T 2d5c_A 137 EAGLEVWVWNRTPQR-ALALAEEF-------GL-----R-AVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPE 198 (263)
T ss_dssp HTTCCEEEECSSHHH-HHHHHHHH-------TC-----E-ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCS
T ss_pred HCCCEEEEEECCHHH-HHHHHHHh-------cc-----c-hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCC
Confidence 789999999998643 22222222 11 1 3577888 99999999999763 3334454 467899
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 265 EAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 265 ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
|+++++++.+.. +. .|.+++++..
T Consensus 199 g~~viD~~~~p~-~t-~l~~~a~~~g 222 (263)
T 2d5c_A 199 EGAAVDLVYRPL-WT-RFLREAKAKG 222 (263)
T ss_dssp SSEEEESCCSSS-SC-HHHHHHHHTT
T ss_pred CCEEEEeecCCc-cc-HHHHHHHHCc
Confidence 999999998743 44 4777777643
No 59
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.22 E-value=8.1e-11 Score=107.86 Aligned_cols=142 Identities=17% Similarity=0.167 Sum_probs=98.9
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV~l 242 (328)
++|||||+|.||+.+|+.| ...|. +|++||+++... +. . ...|... ....+++++++ +||+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l-~~~g~~~~V~~~d~~~~~~-~~-~-------~~~g~~~---~~~~~~~~~~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESI-SK-A-------VDLGIID---EGTTSIAKVEDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHH-HH-H-------HHTTSCS---EEESCGGGGGGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHH-HhcCCCcEEEEEeCCHHHH-HH-H-------HHCCCcc---cccCCHHHHhcCCCCEEEE
Confidence 4799999999999999997 56777 999999986532 11 1 1112211 11357888899 9999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCC---C-CCCCcccCCCeEEc
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP---Y-MKPGLSEMKNAIVV 318 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP---~-~~~~L~~~~nvilT 318 (328)
|+|. ..+..++. +....+++++++++++++.....+.+.+.+.++.+.+ .-++..|. . ...+++...+++++
T Consensus 69 avp~-~~~~~v~~-~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~ 144 (281)
T 2g5c_A 69 SSPV-RTFREIAK-KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILT 144 (281)
T ss_dssp CSCH-HHHHHHHH-HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEEC
T ss_pred cCCH-HHHHHHHH-HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEe
Confidence 9994 35566553 4566799999999999888766778888887641111 12333332 1 12367788889999
Q ss_pred CCCCCC
Q 020301 319 PHIASA 324 (328)
Q Consensus 319 PHia~~ 324 (328)
||.++.
T Consensus 145 ~~~~~~ 150 (281)
T 2g5c_A 145 PTKKTD 150 (281)
T ss_dssp CCSSSC
T ss_pred cCCCCC
Confidence 997654
No 60
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.20 E-value=4.7e-11 Score=113.96 Aligned_cols=122 Identities=16% Similarity=0.278 Sum_probs=95.8
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcC---CE
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA---DV 239 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a---Di 239 (328)
+.+++|||||+|.||+.+|+.| ...|.+|.+||+++... +.. ...+ .....+++++++.+ |+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L-~~~G~~V~v~dr~~~~~-~~l--------~~~g-----~~~~~s~~e~~~~a~~~Dv 84 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRL-RKGGHECVVYDLNVNAV-QAL--------EREG-----IAGARSIEEFCAKLVKPRV 84 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHH--------HTTT-----CBCCSSHHHHHHHSCSSCE
T ss_pred hcCCEEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHH--------HHCC-----CEEeCCHHHHHhcCCCCCE
Confidence 5678999999999999999998 57899999999987542 111 1112 22346899999999 99
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCC
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~ 301 (328)
|++++|.. .++.++ +..+..+++|.++||++++...+...+.+.+++..+......|+..
T Consensus 85 Vi~~vp~~-~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 85 VWLMVPAA-VVDSML-QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp EEECSCGG-GHHHHH-HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred EEEeCCHH-HHHHHH-HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 99999976 777777 5677889999999999999999999999999887665544445443
No 61
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.18 E-value=1.2e-10 Score=114.56 Aligned_cols=158 Identities=18% Similarity=0.251 Sum_probs=103.9
Q ss_pred ceEEE-ccccCCccC-hhHHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCC
Q 020301 88 KAFSN-MAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (328)
Q Consensus 88 k~i~~-~g~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g 165 (328)
+-++- .++|+..+. +.......|+|.|.......+.-+...+ ... .+..+.|. ..+..+.|
T Consensus 203 ~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yG----t~~-------sl~dgi~r------~tg~~L~G 265 (488)
T 3ond_A 203 VGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYG----CRH-------SLPDGLMR------ATDVMIAG 265 (488)
T ss_dssp CEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHH----HHH-------HHHHHHHH------HHCCCCTT
T ss_pred ceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhcc----ccH-------HHHHHHHH------HcCCcccC
Confidence 44433 567776552 2222356799999876433322121111 111 11111110 12356899
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
|+++|+|+|.||+.+|++| +++|++|+++|+++....+. ...+. ...+++++++.+|+|+.+
T Consensus 266 KtVvVtGaGgIG~aiA~~L-aa~GA~Viv~D~~~~~a~~A---------a~~g~------dv~~lee~~~~aDvVi~a-- 327 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAAL-KQAGARVIVTEIDPICALQA---------TMEGL------QVLTLEDVVSEADIFVTT-- 327 (488)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHH---------HHTTC------EECCGGGTTTTCSEEEEC--
T ss_pred CEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHHH---------HHhCC------ccCCHHHHHHhcCEEEeC--
Confidence 9999999999999999997 79999999999986542221 11121 246789999999999965
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHH
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVAL 282 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL 282 (328)
..+.++++.+.|+.||++++++|++|+.. ++.+.+
T Consensus 328 --tG~~~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l 363 (488)
T 3ond_A 328 --TGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGL 363 (488)
T ss_dssp --SSCSCSBCHHHHTTSCTTEEEEESSSTTTTBTHHHH
T ss_pred --CCChhhhhHHHHHhcCCCeEEEEcCCCCcccchHHH
Confidence 45678999999999999999999999832 344444
No 62
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.18 E-value=2.6e-11 Score=111.72 Aligned_cols=111 Identities=18% Similarity=0.110 Sum_probs=89.4
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++|||||+|.||+.+|+.| ...|.+|++|||++... +.. .+.+ .....+++++++.||+|++|+|
T Consensus 2 ~~i~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~-~~~--------~~~g-----~~~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNL-VKAGCSVTIWNRSPEKA-EEL--------AALG-----AERAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGG-HHH--------HHTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HHCCCeEEEEcCCHHHH-HHH--------HHCC-----CeecCCHHHHHhcCCEEEEEcC
Confidence 5899999999999999998 57899999999987542 111 1112 2345789999999999999999
Q ss_pred CChhhhcccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
...+++.++. ++.+..+++|.++||+++....+.+.+.+.+++..+
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG 114 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 7667777662 566788999999999999998888999999987544
No 63
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.17 E-value=2.3e-11 Score=112.87 Aligned_cols=111 Identities=22% Similarity=0.277 Sum_probs=89.7
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.++|||||+|.||+.+|+.| ...|.+|++||+++... +.. .+.+ .....+++++++ ||+|++|+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~-~~~--------~~~g-----~~~~~~~~~~~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRM-TEWPGGVTVYDIRIEAM-TPL--------AEAG-----ATLADSVADVAA-ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHH-TTSTTCEEEECSSTTTS-HHH--------HHTT-----CEECSSHHHHTT-SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHH-HHCCCeEEEEeCCHHHH-HHH--------HHCC-----CEEcCCHHHHHh-CCEEEEEC
Confidence 35899999999999999997 57899999999987542 111 1112 223468999999 99999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
|....++.++ ++.+..+++|.++||+++......+.+.+.+.+..+.
T Consensus 79 p~~~~~~~v~-~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 125 (296)
T 3qha_A 79 LDDAQVREVV-GELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIH 125 (296)
T ss_dssp SSHHHHHHHH-HHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE
T ss_pred CChHHHHHHH-HHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE
Confidence 9777777777 7778889999999999999998999999999875443
No 64
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.16 E-value=1.4e-10 Score=108.60 Aligned_cols=144 Identities=17% Similarity=0.143 Sum_probs=98.1
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHH-HhhcCC
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-VLREAD 238 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-ll~~aD 238 (328)
.+..++|||||+|.||+.+|+.| +..|. +|++||+++... +. +.+.|... ....++++ ++++||
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l-~~~G~~~~V~~~dr~~~~~-~~--------a~~~G~~~---~~~~~~~~~~~~~aD 96 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESI-SK--------AVDLGIID---EGTTSIAKVEDFSPD 96 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHH-HH--------HHHTTSCS---EEESCTTGGGGGCCS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCCCEEEEEECCHHHH-HH--------HHHCCCcc---hhcCCHHHHhhccCC
Confidence 34558999999999999999997 57788 999999987542 11 11122211 12357788 899999
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCC---C-CCCCcccCCC
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP---Y-MKPGLSEMKN 314 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP---~-~~~~L~~~~n 314 (328)
+|++|+|.. .+..++ ++....+++++++++++.......+++.+.+.. ++.+. -=++-.|- . ....|+.-..
T Consensus 97 vVilavp~~-~~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~-hPm~G~e~sG~~~A~~~Lf~g~~ 172 (314)
T 3ggo_A 97 FVMLSSPVR-TFREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGG-HPIAGTEKSGVEYSLDNLYEGKK 172 (314)
T ss_dssp EEEECSCGG-GHHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECE-EECCCCCCCSGGGCCTTTTTTCE
T ss_pred EEEEeCCHH-HHHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEec-CcccCCcccchhhhhhhhhcCCE
Confidence 999999954 345545 566777999999999987765556677776654 22221 11333331 1 1236788889
Q ss_pred eEEcCCCC
Q 020301 315 AIVVPHIA 322 (328)
Q Consensus 315 vilTPHia 322 (328)
+++||+-+
T Consensus 173 ~il~~~~~ 180 (314)
T 3ggo_A 173 VILTPTKK 180 (314)
T ss_dssp EEECCCTT
T ss_pred EEEEeCCC
Confidence 99999854
No 65
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.14 E-value=1.4e-10 Score=111.89 Aligned_cols=238 Identities=16% Similarity=0.156 Sum_probs=129.4
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHHHHhc-------C-CccEEEecCCCCccHHHHHHhhccCCceEEEc-cccC
Q 020301 29 WINLLIEQDCRVEICTQK--KTILSVEDIIALIG-------D-KCDGVIGQLTEDWGETLFAALSRAGGKAFSNM-AVGY 97 (328)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~e~~~~~~~-------~-~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~-g~G~ 97 (328)
..+.|.+.|++|.+.... ...++.++..+.=. + ++|.|+.- ..+ +++.++.++. | +.+..+ --.-
T Consensus 47 ~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkV-k~p-~~~e~~~l~~-g-~~l~~~lh~~~ 122 (405)
T 4dio_A 47 SVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKV-RRP-SAQEISGYRS-G-AVVIAIMDPYG 122 (405)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEE-ECC-CTTTGGGSCT-T-CEEEEECCCTT
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEe-CCC-ChhHHhhcCC-C-cEEEEEecccc
Confidence 457777789998765543 23567777654211 1 35655531 122 2233344443 2 343332 2222
Q ss_pred CccChhHHHhCCceEec---CCCCC-CchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccc-cccCCCEEEEEe
Q 020301 98 NNVDVNAANKYGIAVGN---TPGVL-TETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG-NLLKGQTVGVIG 172 (328)
Q Consensus 98 d~id~~~~~~~gI~v~n---~p~~~-~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~-~~l~g~tvgIiG 172 (328)
|.=-++++.++||...- .|... +.++- ++.-|-.++-+..-......-+. ..+....+ ..+.+.+|+|+|
T Consensus 123 ~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~--~ls~~s~iAGy~Av~~aa~~l~~---~~~~l~t~~g~v~~~kV~ViG 197 (405)
T 4dio_A 123 NEEAISAMAGAGLTTFAMELMPRITRAQSMD--VLSSQANLAGYQAVIDAAYEYDR---ALPMMMTAAGTVPAAKIFVMG 197 (405)
T ss_dssp CHHHHHHHHHTTCEEEEGGGSCCSGGGGGGC--HHHHHHHHHHHHHHHHHHHHCSS---CSSCEEETTEEECCCEEEEEC
T ss_pred CHHHHHHHHHCCCeEEEeeccccccccCccc--eecchhHHHHHHHHHHHHHHhHh---hhchhhccCCCcCCCEEEEEC
Confidence 32234667788888743 33221 11111 11111111111111111111111 11111111 257899999999
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc-------CCCCCcccc----------ccCCHHHHhh
Q 020301 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-------NGEQPVTWK----------RASSMDEVLR 235 (328)
Q Consensus 173 ~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~----------~~~~l~ell~ 235 (328)
+|.||..+|+.+ +++|++|++||+++... +. .+.++..... ++....+.. ...+++++++
T Consensus 198 ~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l-~~-~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~ 274 (405)
T 4dio_A 198 AGVAGLQAIATA-RRLGAVVSATDVRPAAK-EQ-VASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIA 274 (405)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSTTHH-HH-HHHTTCEECCCCC-----------------CHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHH-HHCCCEEEEEcCCHHHH-HH-HHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhc
Confidence 999999999996 79999999999987542 11 1112110000 000000000 0136889999
Q ss_pred cCCEEEEcC--CCChhhhccccHHHHhcCCCCcEEEEcC--CCcccCH
Q 020301 236 EADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (328)
Q Consensus 236 ~aDiV~l~~--plt~~t~~li~~~~~~~mk~ga~lIN~a--RG~~vde 279 (328)
+||+|+.++ |.. .+..+++++.++.||||+++||+| +|+.++.
T Consensus 275 ~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 275 KQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp TCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred CCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 999998774 532 467899999999999999999998 7877654
No 66
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.13 E-value=2.6e-10 Score=106.86 Aligned_cols=125 Identities=17% Similarity=0.079 Sum_probs=90.6
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCch--hHHHHHHhhhhhhhhcCCCCCccccccC-CHHHHhhcCCEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDEVLREADVI 240 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg-~~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ell~~aDiV 240 (328)
.++|||||+|.||..+|+.| ...| .+|++||+++. ...++..+. +...|. .. ++++++++||+|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L-~~~G~~~V~~~dr~~~~~~~~~~~~~~----~~~~g~-------~~~s~~e~~~~aDvV 91 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGL-GGRNAARLAAYDLRFNDPAASGALRAR----AAELGV-------EPLDDVAGIACADVV 91 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECGGGGCTTTHHHHHHH----HHHTTC-------EEESSGGGGGGCSEE
T ss_pred CCeEEEECccHHHHHHHHHH-HHcCCCeEEEEeCCCccccchHHHHHH----HHHCCC-------CCCCHHHHHhcCCEE
Confidence 36899999999999999998 5789 99999999862 111111111 111221 35 788999999999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP 303 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP 303 (328)
++|+|.......+ ++.+..+++|.++||+++......+.+.+.+++..+....--|+.++|
T Consensus 92 i~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~ 152 (317)
T 4ezb_A 92 LSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVP 152 (317)
T ss_dssp EECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCST
T ss_pred EEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCch
Confidence 9999966555543 677788999999999999998899999999987544322222454433
No 67
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.13 E-value=2.6e-11 Score=111.75 Aligned_cols=111 Identities=17% Similarity=0.111 Sum_probs=88.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++|||||+|.||+.+|+.|+ ..|.+|++|||++.... .. ...+ .....+++++++.||+|++|+|
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~-~~G~~V~~~dr~~~~~~-~~--------~~~g-----~~~~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLV-RAGFDVTVWNRNPAKCA-PL--------VALG-----ARQASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHH-HHTCCEEEECSSGGGGH-HH--------HHHT-----CEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEccCHHHHHHHHHHH-HCCCeEEEEcCCHHHHH-HH--------HHCC-----CeecCCHHHHHHcCCEEEEEcC
Confidence 47999999999999999984 67999999999875421 11 1112 2234689999999999999999
Q ss_pred CChhhhcccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
..+.++.++. +..+..+++|.++||++++.....+.+.+.+.+..+
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pdu_A 67 DPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG 114 (287)
T ss_dssp SHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 7667777662 556778999999999999999888999999887543
No 68
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.13 E-value=4.8e-10 Score=103.23 Aligned_cols=145 Identities=14% Similarity=0.064 Sum_probs=99.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhh----hhhhhhcC-CCCC-------ccccccCCHHHH
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA----YGQFLKAN-GEQP-------VTWKRASSMDEV 233 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~----~~~~~~~~-~~~~-------~~~~~~~~l~el 233 (328)
++|+|||.|.||+.+|+.+ ...|.+|++||+++.... ...+. +....... +... .......+++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~l-a~~G~~V~l~d~~~~~~~-~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQT-AFHGFAVTAYDINTDALD-AAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHHHH-HHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCeEEEEeCCHHHHH-HHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 6899999999999999997 478999999999875321 11110 00000000 0000 011234688999
Q ss_pred hhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCC
Q 020301 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK 313 (328)
Q Consensus 234 l~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~ 313 (328)
++.||+|+.++|.+.+.+..+-++....+++++++++.+.+ +..++|.+++... -...++..|. |.+.++
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~-------p~~~~~ 152 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN-------HVWVNN 152 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS-------STTTSC
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC-------CcccCc
Confidence 99999999999988778777777888889999999955443 4667888888643 3456666553 345667
Q ss_pred CeEEcCCCC
Q 020301 314 NAIVVPHIA 322 (328)
Q Consensus 314 nvilTPHia 322 (328)
.+.++||-.
T Consensus 153 lvevv~~~~ 161 (283)
T 4e12_A 153 TAEVMGTTK 161 (283)
T ss_dssp EEEEEECTT
T ss_pred eEEEEeCCC
Confidence 788888843
No 69
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.12 E-value=3.7e-11 Score=111.72 Aligned_cols=112 Identities=19% Similarity=0.158 Sum_probs=88.2
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc-cCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR-ASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ell~~aDiV~l~ 243 (328)
.++|||||+|.||+.+|+.| ...|.+|++||+++... +.. ...|. .. ..+++++++.||+|++|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~-~~~--------~~~g~-----~~~~~~~~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSC-LRAGLSTWGADLNPQAC-ANL--------LAEGA-----CGAAASAREFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHH--------HHTTC-----SEEESSSTTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHH-HHH--------HHcCC-----ccccCCHHHHHhcCCEEEEE
Confidence 46899999999999999998 47799999999987532 111 11122 12 46888999999999999
Q ss_pred CCCChhhhcccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 244 PVLDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 244 ~plt~~t~~li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
+|....++.++. ++.+..+++|.++||+++......+.+.+.+.+..+
T Consensus 72 vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 72 VVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp CSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 997667777653 556678999999999999998888899999987533
No 70
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.12 E-value=8.4e-11 Score=108.96 Aligned_cols=111 Identities=19% Similarity=0.235 Sum_probs=88.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++|||||+|.||+.+|+.| ...|.+|++||+++... +.. .+.+ .....++++++++||+|++|+|
T Consensus 4 ~~I~iiG~G~mG~~~a~~l-~~~G~~V~~~d~~~~~~-~~~--------~~~g-----~~~~~~~~~~~~~aDvvi~~vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNL-LKAGYLLNVFDLVQSAV-DGL--------VAAG-----ASAARSARDAVQGADVVISMLP 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSSHHHH-HHH--------HHTT-----CEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HhCCCeEEEEcCCHHHH-HHH--------HHCC-----CeEcCCHHHHHhCCCeEEEECC
Confidence 5899999999999999997 57799999999986532 111 1112 2334689999999999999999
Q ss_pred CChhhhcccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
...+++.++. .+.+..++++.++||++++.....+.+.+.+.+..+
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 7777777664 266778999999999999998888899999987433
No 71
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.11 E-value=2.6e-10 Score=112.72 Aligned_cols=125 Identities=16% Similarity=0.212 Sum_probs=95.0
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh---cCCEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVIS 241 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~---~aDiV~ 241 (328)
.++|||||+|.||+.+|+.| ...|.+|.+||+++... ++.. +.+..........+++++++ .+|+|+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L-~~~G~~V~v~dr~~~~~-~~l~--------~~g~~g~~i~~~~s~~e~v~~l~~aDvVi 73 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNM-NDHGFVVCAFNRTVSKV-DDFL--------ANEAKGTKVVGAQSLKEMVSKLKKPRRII 73 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSTHHH-HHHH--------HTTTTTSSCEECSSHHHHHHTBCSSCEEE
T ss_pred CCEEEEEChhHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHH--------hcccCCCceeccCCHHHHHhhccCCCEEE
Confidence 35799999999999999998 57799999999987542 2211 11111111222468999887 499999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~ 300 (328)
+++|..+.++.++ ++.+..|++|.++||++++...+...+.+.|++..+.....-|..
T Consensus 74 l~Vp~~~~v~~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 74 LLVKAGQAVDDFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp ECSCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred EecCChHHHHHHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 9999877888877 677888999999999999999999999999988766544444443
No 72
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.11 E-value=1.8e-10 Score=106.95 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=85.5
Q ss_pred CCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.++||||| +|.||+.+|+.| +..|.+|.+||++.. .++++++++||+|++|
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l-~~~G~~V~~~~~~~~---------------------------~~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYL-RASGYPISILDREDW---------------------------AVAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHH-HTTTCCEEEECTTCG---------------------------GGHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHH-HhCCCeEEEEECCcc---------------------------cCHHHHhcCCCEEEEe
Confidence 56899999 999999999997 588999999998642 2466788999999999
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCC--CCCCcccCCCeEEcCCC
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MKPGLSEMKNAIVVPHI 321 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~--~~~~L~~~~nvilTPHi 321 (328)
+|.. .+..++ ++....++++++++++++...-..+++.+.+ + . ++....|. +..+++.-.++++|||-
T Consensus 73 vp~~-~~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~-~-----~~v~~hP~~g~~~~~~~g~~~~l~~~~ 142 (298)
T 2pv7_A 73 VPIN-LTLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH--T-G-----AVLGLHPMFGADIASMAKQVVVRCDGR 142 (298)
T ss_dssp SCGG-GHHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--S-S-----EEEEEEECSCTTCSCCTTCEEEEEEEE
T ss_pred CCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--C-C-----CEEeeCCCCCCCchhhcCCeEEEecCC
Confidence 9953 466766 3455678999999999876543344444432 1 1 23333343 22346666689999974
No 73
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.11 E-value=6.9e-11 Score=106.68 Aligned_cols=108 Identities=10% Similarity=0.147 Sum_probs=65.9
Q ss_pred CCCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhH-------------HHHHHhhhhhhhh
Q 020301 149 LYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATR-------------LEKFVTAYGQFLK 215 (328)
Q Consensus 149 ~w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~-------------~~~~~~~~~~~~~ 215 (328)
.|..|.+......++.+++|||||+|.||+.+|+.| ...|.+|++|||++... .+++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L-~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------- 74 (245)
T 3dtt_A 3 SDKIHHHHHHENLYFQGMKIAVLGTGTVGRTMAGAL-ADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLP------- 74 (245)
T ss_dssp ----------------CCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHHTCC-------CCHHHHGG-------
T ss_pred cccccccccccccccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHh-------
Confidence 344444444456789999999999999999999998 57899999999987541 111110
Q ss_pred cCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHH-HhcCCCCcEEEEcC
Q 020301 216 ANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCS 272 (328)
Q Consensus 216 ~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~-~~~mk~ga~lIN~a 272 (328)
..+ .....++++++++||+|++++|..... ..+. +. ...+ +|.++|+++
T Consensus 75 ~~~-----~~~~~~~~e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 75 EHP-----HVHLAAFADVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIA 124 (245)
T ss_dssp GST-----TCEEEEHHHHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECC
T ss_pred hcC-----ceeccCHHHHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECC
Confidence 101 123468899999999999999955433 3332 22 2233 799999999
No 74
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.08 E-value=2.8e-10 Score=104.54 Aligned_cols=184 Identities=15% Similarity=0.156 Sum_probs=112.8
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhcC----CccEEEecCCCCccHHHHHHhhccCCceEEEccccCCccChhHHH
Q 020301 31 NLLIEQDCRVEICTQKKTILSVEDIIALIGD----KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (328)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~----~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~G~d~id~~~~~ 106 (328)
..+++.|.+..+.... .+++++.+.+.. +++++.+.. |..++++..++++ .-.++...++|.++.
T Consensus 33 ~~~~~~g~~~~y~~~~---~~~~~l~~~i~~l~~~~~~G~nvti--P~k~~i~~~ld~l--~~~A~~~gavnti~~---- 101 (275)
T 2hk9_A 33 ALIRYAGLNAVYLAFE---INPEELKKAFEGFKALKVKGINVTV--PFKEEIIPLLDYV--EDTAKEIGAVNTVKF---- 101 (275)
T ss_dssp HHHHHHTCSEEEEEEE---CCGGGHHHHHHHHHHHTCCEEEECT--TSTTTTGGGCSEE--CHHHHHHTCCCEEEE----
T ss_pred HHHHHcCCCcEEEEEE---CCHHHHHHHHHHHHhCCCCEEEECc--cCHHHHHHHHHHh--hHHHHHhCCcceEEe----
Confidence 4566667665544332 234555444321 467777764 4445666555544 334444456666643
Q ss_pred hCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHh
Q 020301 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (328)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~ 186 (328)
+.|- ..|+|+.. .+++.++.| . +.++.|++++|||.|.+|+.+|+.| .
T Consensus 102 ~~g~----~~g~nTd~-----~G~~~~l~~----------~------------~~~~~~~~v~iiGaG~~g~aia~~L-~ 149 (275)
T 2hk9_A 102 ENGK----AYGYNTDW-----IGFLKSLKS----------L------------IPEVKEKSILVLGAGGASRAVIYAL-V 149 (275)
T ss_dssp ETTE----EEEECCHH-----HHHHHHHHH----------H------------CTTGGGSEEEEECCSHHHHHHHHHH-H
T ss_pred eCCE----EEeecCCH-----HHHHHHHHH----------h------------CCCcCCCEEEEECchHHHHHHHHHH-H
Confidence 2342 23445432 244444432 1 1357889999999999999999997 5
Q ss_pred cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChh--hhccccHHHHhcCCC
Q 020301 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT--TYHLINKERLATMKK 264 (328)
Q Consensus 187 ~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~--t~~li~~~~~~~mk~ 264 (328)
..|++|.+|||+.... ++..+.+ + .....+++++++++|+|++++|.... +...++ ++.+++
T Consensus 150 ~~g~~V~v~~r~~~~~-~~l~~~~-------g-----~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~ 213 (275)
T 2hk9_A 150 KEGAKVFLWNRTKEKA-IKLAQKF-------P-----LEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKK 213 (275)
T ss_dssp HHTCEEEEECSSHHHH-HHHTTTS-------C-----EEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCT
T ss_pred HcCCEEEEEECCHHHH-HHHHHHc-------C-----CeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCC
Confidence 7788999999986432 2111111 1 11223788899999999999997642 223453 456899
Q ss_pred CcEEEEcCC
Q 020301 265 EAILVNCSR 273 (328)
Q Consensus 265 ga~lIN~aR 273 (328)
|+++++++.
T Consensus 214 g~~viDv~~ 222 (275)
T 2hk9_A 214 DHVVVDIIY 222 (275)
T ss_dssp TSEEEESSS
T ss_pred CCEEEEcCC
Confidence 999999988
No 75
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.05 E-value=1e-09 Score=100.86 Aligned_cols=144 Identities=19% Similarity=0.167 Sum_probs=96.2
Q ss_pred CCEEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
-++|||||+|.||+.+|+.|++ ++|.+|++||+++... +.. ...+... ....++++++++||+|+++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~-~~~--------~~~g~~~---~~~~~~~~~~~~aDvVila 73 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSR-DIA--------LERGIVD---EATADFKVFAALADVIILA 73 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHH-HHH--------HHTTSCS---EEESCTTTTGGGCSEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHH-HHH--------HHcCCcc---cccCCHHHhhcCCCEEEEc
Confidence 3689999999999999998753 3478999999986532 111 1112110 1235777888999999999
Q ss_pred CCCChhhhccccHHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEe---CCCC---CCCC-CCCcccCCCe
Q 020301 244 PVLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD---VFED---EPYM-KPGLSEMKNA 315 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~-mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalD---V~~~---EP~~-~~~L~~~~nv 315 (328)
+|. .....++ ++.... ++++.++++++++.....+.+.+.+.+..+. .++ ++-. .|.. ...++.-+++
T Consensus 74 vp~-~~~~~v~-~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~ 149 (290)
T 3b1f_A 74 VPI-KKTIDFI-KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYY 149 (290)
T ss_dssp SCH-HHHHHHH-HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEE
T ss_pred CCH-HHHHHHH-HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeE
Confidence 994 3345555 345566 8999999999988776668888888752122 123 2221 2321 2367777889
Q ss_pred EEcCCCCCC
Q 020301 316 IVVPHIASA 324 (328)
Q Consensus 316 ilTPHia~~ 324 (328)
+++||.++.
T Consensus 150 ~~~~~~~~~ 158 (290)
T 3b1f_A 150 IFSPSCLTK 158 (290)
T ss_dssp EEEECTTCC
T ss_pred EEecCCCCC
Confidence 999997654
No 76
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.99 E-value=1.4e-09 Score=103.87 Aligned_cols=108 Identities=17% Similarity=0.245 Sum_probs=83.3
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-cCCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (328)
+|.|+|++|+|+|+||+.+|+.| ..+|++|+++|++... .+++.+.| +. ...+.++++. +||++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L-~~~GakVvv~D~~~~~-l~~~a~~~-------ga------~~v~~~~ll~~~~DIv 234 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKL-NTEGAKLVVTDVNKAA-VSAAVAEE-------GA------DAVAPNAIYGVTCDIF 234 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH-HHHHHHHH-------CC------EECCGGGTTTCCCSEE
T ss_pred CCCcCEEEEECchHHHHHHHHHH-HHCCCEEEEEcCCHHH-HHHHHHHc-------CC------EEEChHHHhccCCcEe
Confidence 69999999999999999999997 6999999999987642 23333222 11 1246667776 89999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
+.|. +.++|+.+.++.|+ ..+++|.+++++.+++ ..+.|+++.+
T Consensus 235 ip~a-----~~~~I~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 235 APCA-----LGAVLNDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp EECS-----CSCCBSTTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred eccc-----hHHHhCHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 8773 67799998999995 6799999999998866 4566666555
No 77
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.98 E-value=6.3e-10 Score=102.70 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=85.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++|||||+|.||+.+|+.| ...|.+|.+||+++... +.. ...+ .....+++++++.+|+|++++|
T Consensus 5 ~~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~-~~~--------~~~g-----~~~~~~~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINL-LKEGVTVYAFDLMEANV-AAV--------VAQG-----AQACENNQKVAAASDIIFTSLP 69 (301)
T ss_dssp CEEEEECCCTTHHHHHHHH-HHTTCEEEEECSSHHHH-HHH--------HTTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHH-HHH--------HHCC-----CeecCCHHHHHhCCCEEEEECC
Confidence 5899999999999999997 46799999999986532 111 1112 2234688999999999999999
Q ss_pred CChhhhcccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
....++.++. ++....+++|.++|+++.|...+.+.|.+.+.+.
T Consensus 70 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 70 NAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 7777777774 3566778999999999998876788899988763
No 78
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.98 E-value=6.9e-10 Score=102.33 Aligned_cols=109 Identities=18% Similarity=0.202 Sum_probs=85.5
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
.+++|||+|.||+.+|+.| ...|.+|.+||+++... +.. ...+ .....+++++++.+|+|++|+|
T Consensus 6 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~-~~~--------~~~g-----~~~~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNL-LKAGYSLVVSDRNPEAI-ADV--------IAAG-----AETASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHH-HHH--------HHTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHH--------HHCC-----CeecCCHHHHHhCCCEEEEECC
Confidence 4799999999999999997 46799999999986532 111 1112 2234688999999999999999
Q ss_pred CChhhhcccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
....++.++. ++....+++|.++||++.|...+.+.|.+.+.+.
T Consensus 71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 71 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 7667777663 3556778999999999999877788999998764
No 79
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=98.97 E-value=4.3e-10 Score=106.55 Aligned_cols=138 Identities=13% Similarity=0.091 Sum_probs=87.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc----CCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE----ADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~----aDiV~ 241 (328)
++|||||+|.||+++|+.| +..|.+|++||+++.... . +...|. ....++++++++ ||+|+
T Consensus 9 ~kIgIIG~G~mG~slA~~L-~~~G~~V~~~dr~~~~~~-~--------a~~~G~-----~~~~~~~e~~~~a~~~aDlVi 73 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDL-HAANHSVFGYNRSRSGAK-S--------AVDEGF-----DVSADLEATLQRAAAEDALIV 73 (341)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEECSCHHHHH-H--------HHHTTC-----CEESCHHHHHHHHHHTTCEEE
T ss_pred CEEEEEeecHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-H--------HHHcCC-----eeeCCHHHHHHhcccCCCEEE
Confidence 5799999999999999997 678999999999875321 1 112232 123678888765 69999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCC-CC---CCCCcccCCCeEE
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE-PY---MKPGLSEMKNAIV 317 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~E-P~---~~~~L~~~~nvil 317 (328)
+|+|. ..+..++ + .+..++++++++|++.-..--.+++.+.+...+..+. -=++-.| .. ....|+.-.++++
T Consensus 74 lavP~-~~~~~vl-~-~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~-HPmaG~e~sG~~aa~~~Lf~g~~~il 149 (341)
T 3ktd_A 74 LAVPM-TAIDSLL-D-AVHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGS-HPMAGTANSGWSASMDGLFKRAVWVV 149 (341)
T ss_dssp ECSCH-HHHHHHH-H-HHHHHCTTCCEEECCSCSHHHHHHHHHTTCGGGEECE-EECCSCC-CCGGGCCSSTTTTCEEEE
T ss_pred EeCCH-HHHHHHH-H-HHHccCCCCEEEEcCCCChHHHHHHHHhCCCCcEecC-CccccccccchhhhhhHHhcCCeEEE
Confidence 99994 4666666 2 3444699999999976543222333333321111110 1122222 11 1235888788999
Q ss_pred cCCCC
Q 020301 318 VPHIA 322 (328)
Q Consensus 318 TPHia 322 (328)
||+-.
T Consensus 150 tp~~~ 154 (341)
T 3ktd_A 150 TFDQL 154 (341)
T ss_dssp CCGGG
T ss_pred EeCCC
Confidence 99843
No 80
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.96 E-value=1.7e-09 Score=107.03 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=89.7
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc---CC
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---AD 238 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aD 238 (328)
-+..++|||||+|.||+.+|+.|+ ..|.+|.+|||++... ++..+.+ .+ .+.....+++++++. ||
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La-~~G~~V~v~~r~~~~~-~~l~~~~------~~---~gi~~~~s~~e~v~~l~~aD 80 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIE-SRGYTVSIFNRSREKT-EEVIAEN------PG---KKLVPYYTVKEFVESLETPR 80 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHH-TTTCCEEEECSSHHHH-HHHHHHS------TT---SCEEECSSHHHHHHTBCSSC
T ss_pred ccCCCeEEEEccHHHHHHHHHHHH-hCCCeEEEEeCCHHHH-HHHHhhC------CC---CCeEEeCCHHHHHhCCCCCC
Confidence 456678999999999999999984 7799999999987542 2221111 00 122234689999887 99
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
+|++++|....++.++ ++....+++|.++||++.|...+...+.+.|.+..+
T Consensus 81 vVil~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 81 RILLMVKAGAGTDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp EEEECSCSSSHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 9999999877888888 466778999999999999988888889999987433
No 81
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.94 E-value=8.4e-10 Score=101.62 Aligned_cols=107 Identities=23% Similarity=0.311 Sum_probs=81.6
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~pl 246 (328)
+|||||+|.||+.+|+.| ...|.+|++||+++... +.. ...+ .....+++++++.+|+|++|+|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~-~~~--------~~~g-----~~~~~~~~~~~~~~Dvvi~~vp~ 66 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNL-MKHGYPLIIYDVFPDAC-KEF--------QDAG-----EQVVSSPADVAEKADRIITMLPT 66 (296)
T ss_dssp CEEEECCSTTHHHHHHHH-HHTTCCEEEECSSTHHH-HHH--------HTTT-----CEECSSHHHHHHHCSEEEECCSS
T ss_pred eEEEEeccHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHH--------HHcC-----CeecCCHHHHHhcCCEEEEeCCC
Confidence 699999999999999997 47799999999986532 111 1112 22346889999999999999997
Q ss_pred ChhhhccccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 247 DKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 247 t~~t~~li~~--~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
...++.++.. ..+..+++|.++|+++....-+.+.+.+.+.+
T Consensus 67 ~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 67 SINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp HHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 7777776643 25567899999999887776666777777765
No 82
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.91 E-value=7.5e-10 Score=101.83 Aligned_cols=107 Identities=16% Similarity=0.136 Sum_probs=83.2
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++|||||+|.||+.+|+.| ...|.+|.+|| ++... +.. ...+ .....+++++++++|+|++|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~-~~~~~-~~~--------~~~g-----~~~~~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINL-ARAGHQLHVTT-IGPVA-DEL--------LSLG-----AVNVETARQVTEFADIIFIMVP 67 (295)
T ss_dssp CEEEECCCSTTHHHHHHHH-HHTTCEEEECC-SSCCC-HHH--------HTTT-----CBCCSSHHHHHHTCSEEEECCS
T ss_pred CEEEEEccCHHHHHHHHHH-HhCCCEEEEEc-CHHHH-HHH--------HHcC-----CcccCCHHHHHhcCCEEEEECC
Confidence 4899999999999999997 46799999999 65431 111 1112 1234688999999999999999
Q ss_pred CChhhhccccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 246 lt~~t~~li~~--~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
...+++.++.. +....+++|.++|+++.|...+.+.|.+.+.+
T Consensus 68 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~ 112 (295)
T 1yb4_A 68 DTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNE 112 (295)
T ss_dssp SHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 76667776642 45567899999999999987888899999986
No 83
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.89 E-value=2.6e-09 Score=99.49 Aligned_cols=109 Identities=15% Similarity=0.167 Sum_probs=83.8
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++|||||+|.||+.+|+.| ...|.+|.+||+++... +.. ...+ .....+++++++++|+|++++|
T Consensus 31 ~~I~iIG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~-~~~--------~~~g-----~~~~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNL-LKMGHTVTVWNRTAEKC-DLF--------IQEG-----ARLGRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEECSSGGGG-HHH--------HHTT-----CEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHH--------HHcC-----CEEcCCHHHHHhcCCEEEEeCC
Confidence 6799999999999999997 46799999999986532 111 1112 1224578899999999999999
Q ss_pred CChhhhccccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 246 lt~~t~~li~~--~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
....++.++.. ..+..++++.++|+++.+.....+.|.+.+...
T Consensus 96 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 141 (316)
T 2uyy_A 96 DPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSR 141 (316)
T ss_dssp SHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 76677766643 245778999999999998777778888888653
No 84
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.88 E-value=2e-09 Score=98.61 Aligned_cols=106 Identities=17% Similarity=0.207 Sum_probs=81.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
++|||||+|.||+.+|+.| .. |.+|.+||+++... +... ..|. .... ++++++.+|+|++|+|
T Consensus 2 ~~i~iiG~G~~G~~~a~~l-~~-g~~V~~~~~~~~~~-~~~~--------~~g~-----~~~~-~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHL-AR-RFPTLVWNRTFEKA-LRHQ--------EEFG-----SEAV-PLERVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHH-HT-TSCEEEECSSTHHH-HHHH--------HHHC-----CEEC-CGGGGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHH-hC-CCeEEEEeCCHHHH-HHHH--------HCCC-----cccC-HHHHHhCCCEEEEeCC
Confidence 4699999999999999997 46 99999999986532 1111 1111 1123 6788899999999999
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
....+..++ ++....+++|.++|+++.+...+.+.|.+.+.+.
T Consensus 65 ~~~~~~~v~-~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 65 TTREVYEVA-EALYPYLREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp SHHHHHHHH-HHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred ChHHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 665577666 5566778999999999998888888999998874
No 85
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.88 E-value=2.5e-09 Score=101.13 Aligned_cols=136 Identities=20% Similarity=0.192 Sum_probs=92.2
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
..+.+++|||||+|.||+.+|+.| +..|++|++||++.....+. +...|. .. .++++++++||+|
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L-~~~G~~V~~~~~~~~~~~~~--------a~~~G~-----~~-~~~~e~~~~aDvV 76 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNL-KDSGVDVTVGLRSGSATVAK--------AEAHGL-----KV-ADVKTAVAAADVV 76 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHH-HHTTCCEEEECCTTCHHHHH--------HHHTTC-----EE-ECHHHHHHTCSEE
T ss_pred chhcCCEEEEECchHHHHHHHHHH-HHCcCEEEEEECChHHHHHH--------HHHCCC-----EE-ccHHHHHhcCCEE
Confidence 468899999999999999999997 57899999999986432211 111222 12 2888999999999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc-EEEEeCCCCCCCCC-C---Cccc---C
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF-RVGLDVFEDEPYMK-P---GLSE---M 312 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~-gaalDV~~~EP~~~-~---~L~~---~ 312 (328)
++|+|.. ....++.++....|++|+++++++ | +.. ..+ .+. ..++||+...|... + .++. -
T Consensus 77 ilavp~~-~~~~v~~~~i~~~l~~~~ivi~~~-g--v~~--~~~-----~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g 145 (338)
T 1np3_A 77 MILTPDE-FQGRLYKEEIEPNLKKGATLAFAH-G--FSI--HYN-----QVVPRADLDVIMIAPKAPGHTVRSEFVKGGG 145 (338)
T ss_dssp EECSCHH-HHHHHHHHHTGGGCCTTCEEEESC-C--HHH--HTT-----SSCCCTTCEEEEEEESSCSHHHHHHHHTTCC
T ss_pred EEeCCcH-HHHHHHHHHHHhhCCCCCEEEEcC-C--chh--HHH-----hhcCCCCcEEEeccCCCCchhHHHHHhccCC
Confidence 9999943 345666546667899999999873 3 222 111 122 33456666666422 2 2444 5
Q ss_pred CCeEEcCCCC
Q 020301 313 KNAIVVPHIA 322 (328)
Q Consensus 313 ~nvilTPHia 322 (328)
.++++|||..
T Consensus 146 ~~~ii~~~~~ 155 (338)
T 1np3_A 146 IPDLIAIYQD 155 (338)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEecCC
Confidence 6788999864
No 86
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.38 E-value=2.3e-10 Score=100.47 Aligned_cols=93 Identities=19% Similarity=0.222 Sum_probs=71.9
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
+.++++||||+|.||+.+|+.| ...|.+|++|||+.. .+.. ...+ .. ..++++++++||+|++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~--~~~~--------~~~g-----~~-~~~~~~~~~~aDvVil 79 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKM-LQCGYSVVFGSRNPQ--VSSL--------LPRG-----AE-VLCYSEAASRSDVIVL 79 (201)
Confidence 6788999999999999999997 578999999998764 1111 0111 11 2377888999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~ 276 (328)
++|.. +++.++ .+..+++++++||+++|-.
T Consensus 80 av~~~-~~~~v~---~l~~~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 80 AVHRE-HYDFLA---ELADSLKGRVLIDVSNNQK 109 (201)
Confidence 99964 677766 2566788999999999975
No 87
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.86 E-value=4.4e-09 Score=104.45 Aligned_cols=116 Identities=16% Similarity=0.228 Sum_probs=88.7
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc---CCEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVIS 241 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDiV~ 241 (328)
..+|||||+|.||+.+|+.|+ ..|.+|.+|||++... ++..+. ..+ ..+.....+++++++. ||+|+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~------~~~--~~gi~~~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAA-DHGFTVCAYNRTQSKV-DHFLAN------EAK--GKSIIGATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSHHH-HHHHHT------TTT--TSSEECCSSHHHHHHTSCSSCEEE
T ss_pred CCCEEEEeeHHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHHcc------ccc--CCCeEEeCCHHHHHhcCCCCCEEE
Confidence 457999999999999999985 6799999999987542 221110 000 0122334689998887 99999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
+++|....++.++ ++....+++|.++|+++.+...+...+.+.+.+..+
T Consensus 80 l~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~ 128 (497)
T 2p4q_A 80 LLVKAGAPVDALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGI 128 (497)
T ss_dssp ECCCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred EEcCChHHHHHHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCC
Confidence 9999777888877 567778999999999999988888889998877433
No 88
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.83 E-value=3e-08 Score=97.28 Aligned_cols=166 Identities=18% Similarity=0.145 Sum_probs=103.9
Q ss_pred CCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCC------CCCCcccccccCCCEEEEEecCHHHHHHHHHHHhcC
Q 020301 115 TPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDG------WLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGF 188 (328)
Q Consensus 115 ~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~------w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~f 188 (328)
..|-|-..|.|.+.+++|...|. .++|.- |... ..-.=++|||||.|.||..+|..++ ..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~---------~~~w~~p~~~~~~~~~----~~~~i~kVaVIGaG~MG~~IA~~la-~a 76 (460)
T 3k6j_A 11 STGENLYFQGSEVRSYLMEAHSL---------AGQWSLPNDRGDHTNS----EAYDVNSVAIIGGGTMGKAMAICFG-LA 76 (460)
T ss_dssp TTSGGGGGCBCHHHHHHHHTTCC---------TTSCBCSTTSCBTTSC----CCCCCCEEEEECCSHHHHHHHHHHH-HT
T ss_pred ccccchhhhhHHHHHHHHhHHHh---------hccccCCCCccccccC----CcccCCEEEEECCCHHHHHHHHHHH-HC
Confidence 34556667778888888863322 234531 2110 1122368999999999999999985 66
Q ss_pred CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCC--------ccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHh
Q 020301 189 KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--------VTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (328)
Q Consensus 189 g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~ 260 (328)
|.+|++||+++........+.+. .+.+.|... .......+++ .+++||+|+.++|.+.+.+.-+-++..+
T Consensus 77 G~~V~l~D~~~e~a~~~i~~~l~-~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~ 154 (460)
T 3k6j_A 77 GIETFLVVRNEQRCKQELEVMYA-REKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLEN 154 (460)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHH-HHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHT
T ss_pred CCeEEEEECcHHHHHHHHHHHHH-HHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHh
Confidence 99999999997632111111111 111122110 0111235675 6899999999999877776555567778
Q ss_pred cCCCCcEEE-EcCCCcccCHHHHHHHHHcCCccEEEEeCCC
Q 020301 261 TMKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (328)
Q Consensus 261 ~mk~ga~lI-N~aRG~~vde~aL~~aL~~g~i~gaalDV~~ 300 (328)
.++++++|+ |+|. +....+.+++.. .-...++..|.
T Consensus 155 ~~~~~aIlasnTSs---l~i~~ia~~~~~-p~r~iG~Hffn 191 (460)
T 3k6j_A 155 ICKSTCIFGTNTSS---LDLNEISSVLRD-PSNLVGIHFFN 191 (460)
T ss_dssp TSCTTCEEEECCSS---SCHHHHHTTSSS-GGGEEEEECCS
T ss_pred hCCCCCEEEecCCC---hhHHHHHHhccC-CcceEEEEecc
Confidence 899999996 5554 445667766653 34567788777
No 89
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.83 E-value=7e-09 Score=102.41 Aligned_cols=115 Identities=16% Similarity=0.153 Sum_probs=87.5
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc---CCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDiV~l 242 (328)
++|||||+|.||+.+|+.|+ ..|.+|.+|||++... ++..+.+ + ..+.....+++++++. +|+|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~-~~G~~V~v~dr~~~~~-~~l~~~~-------~--~~gi~~~~s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVE-SRGYTVAIYNRTTSKT-EEVFKEH-------Q--DKNLVFTKTLEEFVGSLEKPRRIML 74 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSHHHH-HHHHHHT-------T--TSCEEECSSHHHHHHTBCSSCEEEE
T ss_pred CcEEEEeeHHHHHHHHHHHH-hCCCEEEEEcCCHHHH-HHHHHhC-------c--CCCeEEeCCHHHHHhhccCCCEEEE
Confidence 57999999999999999984 6799999999986532 2221111 0 0112234689999886 999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
++|....+..++ ++....+++|.++|+++.|...+...+.+.+.+..+.
T Consensus 75 avp~~~~v~~vl-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~ 123 (474)
T 2iz1_A 75 MVQAGAATDATI-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGIN 123 (474)
T ss_dssp CCCTTHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCE
T ss_pred EccCchHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCe
Confidence 999777788777 4566788999999999999877888899888764443
No 90
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.81 E-value=2.2e-08 Score=82.53 Aligned_cols=105 Identities=14% Similarity=0.223 Sum_probs=76.1
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
|++++|||.|.||+.+++.| ..+|++|.++|+++... +++.+.+ + .......+++++++++|+|++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l-~~~g~~v~v~~r~~~~~-~~~a~~~-------~---~~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYF-SYPQYKVTVAGRNIDHV-RAFAEKY-------E---YEYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGC-CTTTCEEEEEESCHHHH-HHHHHHH-------T---CEEEECSCHHHHHHTCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEcCCHHHH-HHHHHHh-------C---CceEeecCHHHHhcCCCEEEEeC
Confidence 88999999999999999997 57899999999987542 2222222 1 11123468899999999999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCcc-------cCHHHHHHHHH
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPV-------IDEVALVEHLK 287 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-------vde~aL~~aL~ 287 (328)
|.+ ..++.. +.+++|.+++|++...- ++.++|.+.++
T Consensus 89 ~~~---~~~~~~---~~l~~g~~vid~~~p~~~~~~~~~~~~d~l~~~~~ 132 (144)
T 3oj0_A 89 SSK---TPIVEE---RSLMPGKLFIDLGNPPNIERGNNVITLDEIYEISK 132 (144)
T ss_dssp CCS---SCSBCG---GGCCTTCEEEECCSSCSBCCSTTSEEHHHHHHHHH
T ss_pred CCC---CcEeeH---HHcCCCCEEEEccCCccCCCCCEEEeHHHHHHHHH
Confidence 865 344554 45688999999987543 34556665544
No 91
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.81 E-value=2.5e-09 Score=104.74 Aligned_cols=103 Identities=19% Similarity=0.193 Sum_probs=72.3
Q ss_pred ccccCC-CEEEEEecCHHHHHHHHHHHhcC------CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHH
Q 020301 160 GNLLKG-QTVGVIGAGRIGSAYARMMVEGF------KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE 232 (328)
Q Consensus 160 ~~~l~g-~tvgIiG~G~IG~~vA~~l~~~f------g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 232 (328)
...|.| ++|||||+|.||.++|+.|. .. |++|++.++......+. +...|.... .....++++
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr-~s~~~~g~G~~ViVg~r~~sks~e~--------A~e~G~~v~-d~ta~s~aE 117 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKIGLRKGSKSFDE--------ARAAGFTEE-SGTLGDIWE 117 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHH-HHHHHTTCCCEEEEEECTTCSCHHH--------HHHTTCCTT-TTCEEEHHH
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHH-hcccccCCCCEEEEEeCCchhhHHH--------HHHCCCEEe-cCCCCCHHH
Confidence 367999 99999999999999999974 44 99988665543221111 112232210 001247899
Q ss_pred HhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 233 ll~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
++++||+|++++|..... .++. +.+..||+|++ |-.+-|-
T Consensus 118 Aa~~ADVVILaVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaGf 157 (525)
T 3fr7_A 118 TVSGSDLVLLLISDAAQA-DNYE-KIFSHMKPNSI-LGLSHGF 157 (525)
T ss_dssp HHHHCSEEEECSCHHHHH-HHHH-HHHHHSCTTCE-EEESSSH
T ss_pred HHhcCCEEEECCChHHHH-HHHH-HHHHhcCCCCe-EEEeCCC
Confidence 999999999999965553 4665 68899999998 5666773
No 92
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.81 E-value=3.5e-08 Score=92.53 Aligned_cols=132 Identities=12% Similarity=0.085 Sum_probs=86.5
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHH--HHHhhhhhhhhcCCCCCc---------cccccCCHHHH
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE--KFVTAYGQFLKANGEQPV---------TWKRASSMDEV 233 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~l~el 233 (328)
-++|||||.|.||..+|..++ ..|.+|++||+++..... +........+...|.... ......+++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la-~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 368999999999999999985 669999999998754211 110000000111221110 12234689999
Q ss_pred hhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCC
Q 020301 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (328)
Q Consensus 234 l~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~ 300 (328)
++.||+|+.++|...+.+.-+-++..+.++++++|+..+.+ +....+.+.+.. .-...++..|.
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~ 148 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN 148 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC
Confidence 99999999999977776655556677789999999866555 455677776653 23445555444
No 93
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.80 E-value=2.9e-08 Score=90.51 Aligned_cols=137 Identities=15% Similarity=0.081 Sum_probs=89.5
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~pl 246 (328)
+++|||+|.||+.+|+.| ...|.+|++||+++... +.. ...+... ....+++++ ++||+|++++|
T Consensus 2 ~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~-~~~--------~~~g~~~---~~~~~~~~~-~~~D~vi~av~- 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDL-RRRGHYLIGVSRQQSTC-EKA--------VERQLVD---EAGQDLSLL-QTAKIIFLCTP- 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHH--------HHTTSCS---EEESCGGGG-TTCSEEEECSC-
T ss_pred EEEEEcCcHHHHHHHHHH-HHCCCEEEEEECCHHHH-HHH--------HhCCCCc---cccCCHHHh-CCCCEEEEECC-
Confidence 799999999999999997 57789999999986532 111 1112211 123578888 99999999999
Q ss_pred ChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCC---CCC-CCCcccCCCeEEcCCCC
Q 020301 247 DKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE---PYM-KPGLSEMKNAIVVPHIA 322 (328)
Q Consensus 247 t~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~E---P~~-~~~L~~~~nvilTPHia 322 (328)
...+..++ ++....+++++++||++.......+.+.+.+. ++.+. .-++..+ |.. ...++.-+.++++|+-+
T Consensus 67 ~~~~~~~~-~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~ 142 (279)
T 2f1k_A 67 IQLILPTL-EKLIPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTEY 142 (279)
T ss_dssp HHHHHHHH-HHHGGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECTT
T ss_pred HHHHHHHH-HHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCCC
Confidence 34555655 45566789999999997766555555555543 23222 1233212 211 12456666788888754
No 94
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.79 E-value=8.2e-09 Score=102.10 Aligned_cols=116 Identities=15% Similarity=0.234 Sum_probs=86.8
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh---cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~---~aDiV~l 242 (328)
.+|||||+|.||+.+|+.|+ ..|.+|.+|||++... ++..+. +..+ .+.....+++++++ .+|+|++
T Consensus 3 m~IgvIG~G~mG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~-----~~~g---~gi~~~~~~~e~v~~l~~aDvVil 72 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMN-DHGFVVCAFNRTVSKV-DDFLAN-----EAKG---TKVLGAHSLEEMVSKLKKPRRIIL 72 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSTHHH-HHHHHT-----TTTT---SSCEECSSHHHHHHHBCSSCEEEE
T ss_pred CeEEEEChHHHHHHHHHHHH-HCCCeEEEEeCCHHHH-HHHHhc-----cccC---CCeEEeCCHHHHHhhccCCCEEEE
Confidence 46999999999999999984 6799999999986542 221110 0001 11223468889875 8999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
++|....++.++ ++....+++|.++|+++.|...+...+.+.+.+..+.
T Consensus 73 aVp~~~~v~~vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~ 121 (482)
T 2pgd_A 73 LVKAGQAVDNFI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGIL 121 (482)
T ss_dssp CSCTTHHHHHHH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred eCCChHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 999777788877 4566789999999999999887888888888774443
No 95
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.78 E-value=1.3e-08 Score=92.08 Aligned_cols=102 Identities=12% Similarity=0.089 Sum_probs=75.6
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchh-HHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT-RLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
+|||||+|.||+.+|+.|+ ..|.+|++||+...+ ..+.. ...|. . .++++++++||+|++|+|
T Consensus 2 ~I~iIG~G~mG~~la~~l~-~~g~~V~~~~~~~~~~~~~~~--------~~~g~-----~--~~~~~~~~~aDvvi~~v~ 65 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLR-SRGVEVVTSLEGRSPSTIERA--------RTVGV-----T--ETSEEDVYSCPVVISAVT 65 (264)
T ss_dssp EEEEESCSHHHHHHHHHHH-HTTCEEEECCTTCCHHHHHHH--------HHHTC-----E--ECCHHHHHTSSEEEECSC
T ss_pred eEEEEechHHHHHHHHHHH-HCCCeEEEeCCccCHHHHHHH--------HHCCC-----c--CCHHHHHhcCCEEEEECC
Confidence 7999999999999999984 679999999883211 11111 11121 1 467889999999999999
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
.....+.+ .+.+..+++ ++||++.+...+.+.|.+.+.+
T Consensus 66 ~~~~~~~~--~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 66 PGVALGAA--RRAGRHVRG--IYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp GGGHHHHH--HHHHTTCCS--EEEECSCCCHHHHHHHHHHCSS
T ss_pred CHHHHHHH--HHHHHhcCc--EEEEccCCCHHHHHHHHHHHhh
Confidence 65555554 456677876 9999998877777888888865
No 96
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.77 E-value=2.9e-08 Score=98.08 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=87.2
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc---CCEEEEc
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISLH 243 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDiV~l~ 243 (328)
+|||||+|.||+.+|+.|+ ..|.+|.+|||++... ++..+.++.. ..........+++++++. +|+|+++
T Consensus 3 kIgVIG~G~mG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~~g~~-----~~~~~i~~~~~~~e~v~~l~~aDvVila 75 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIA-EKGFKVAVFNRTYSKS-EEFMKANASA-----PFAGNLKAFETMEAFAASLKKPRKALIL 75 (478)
T ss_dssp SEEEECCSHHHHHHHHHHH-HTTCCEEEECSSHHHH-HHHHHHTTTS-----TTGGGEEECSCHHHHHHHBCSSCEEEEC
T ss_pred EEEEEChHHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHHHhcCCC-----CCCCCeEEECCHHHHHhcccCCCEEEEe
Confidence 6999999999999999984 6799999999986532 2221111100 001112334689998875 9999999
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
+|....++.++ ++....+++|.++|+++.|...+.+.+.+.+.+..+.
T Consensus 76 Vp~~~~v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~ 123 (478)
T 1pgj_A 76 VQAGAATDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLR 123 (478)
T ss_dssp CCCSHHHHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCE
T ss_pred cCChHHHHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCe
Confidence 99777788777 5666778999999999999877888899999875443
No 97
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.77 E-value=2e-08 Score=93.16 Aligned_cols=136 Identities=19% Similarity=0.186 Sum_probs=87.6
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
--+.|+|||||+|.||..+|+.+ . .|.+|++||+++... ++..+.+ .+. ...+.....++++ +++||+|+
T Consensus 9 ~~~~~~V~vIG~G~MG~~iA~~l-a-aG~~V~v~d~~~~~~-~~~~~~l----~~~--~~~~i~~~~~~~~-~~~aDlVi 78 (293)
T 1zej_A 9 HHHHMKVFVIGAGLMGRGIAIAI-A-SKHEVVLQDVSEKAL-EAAREQI----PEE--LLSKIEFTTTLEK-VKDCDIVM 78 (293)
T ss_dssp ---CCEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHHH-HHHHHHS----CGG--GGGGEEEESSCTT-GGGCSEEE
T ss_pred ccCCCeEEEEeeCHHHHHHHHHH-H-cCCEEEEEECCHHHH-HHHHHHH----HHH--HhCCeEEeCCHHH-HcCCCEEE
Confidence 34678999999999999999997 5 799999999987542 2211110 000 0001222356776 89999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEEcCC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPH 320 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lI-N~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPH 320 (328)
.++|...+.+..+-.+ ++.+ ++++++ |+|.- ....+.++++ ..-...++-.|. |.+ .++-+.++|+
T Consensus 79 eavpe~~~vk~~l~~~-l~~~-~~~IlasntSti---~~~~~a~~~~-~~~r~~G~Hf~~--Pv~-----~~~lveiv~g 145 (293)
T 1zej_A 79 EAVFEDLNTKVEVLRE-VERL-TNAPLCSNTSVI---SVDDIAERLD-SPSRFLGVHWMN--PPH-----VMPLVEIVIS 145 (293)
T ss_dssp ECCCSCHHHHHHHHHH-HHTT-CCSCEEECCSSS---CHHHHHTTSS-CGGGEEEEEECS--STT-----TCCEEEEEEC
T ss_pred EcCcCCHHHHHHHHHH-HhcC-CCCEEEEECCCc---CHHHHHHHhh-cccceEeEEecC--ccc-----cCCEEEEECC
Confidence 9999888877665443 6777 999985 88774 4455655553 233466777676 432 2345555554
No 98
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.75 E-value=2.6e-08 Score=98.11 Aligned_cols=147 Identities=14% Similarity=0.225 Sum_probs=93.3
Q ss_pred CEEEEEecCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhh----h----hhhhhcCCCCCccccccCCHHHHhhc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTA----Y----GQFLKANGEQPVTWKRASSMDEVLRE 236 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~-fg~~V~~~d~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (328)
++|+|||+|.||..+|..|++. .|.+|++||+++... +..... | .+..... ...+.....++++.++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~-~~l~~g~~~i~e~~l~~~~~~~--~~~~~~~t~~~~e~~~~ 82 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRI-NAWNSPTLPIYEPGLKEVVESC--RGKNLFFSTNIDDAIKE 82 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH-HHHTSSSCSSCCTTHHHHHHHH--BTTTEEEESCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH-HHHhCCCCCcCCCCHHHHHHHh--hcCCEEEECCHHHHHhc
Confidence 4899999999999999998532 289999999986532 111000 0 0000000 00112223678889999
Q ss_pred CCEEEEcCCCChhhhccc-------------cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEe---CCC
Q 020301 237 ADVISLHPVLDKTTYHLI-------------NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD---VFE 300 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li-------------~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalD---V~~ 300 (328)
||+|++|+|...+..+.+ -+.....|++|+++||.|+..+-..+.+.+.|++.... .+| ++.
T Consensus 83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~ 160 (467)
T 2q3e_A 83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSN 160 (467)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEEC
T ss_pred CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeC
Confidence 999999999544333221 13455678999999999998887788899999875322 233 355
Q ss_pred CCCCCCC----CcccCCCeEE
Q 020301 301 DEPYMKP----GLSEMKNAIV 317 (328)
Q Consensus 301 ~EP~~~~----~L~~~~nvil 317 (328)
+|+..+. .+...+++++
T Consensus 161 Pe~~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 161 PEFLAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCCCCTTSHHHHHHSCSCEEE
T ss_pred HHHhhcccchhhccCCCEEEE
Confidence 6655332 2456666754
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.71 E-value=2e-08 Score=91.12 Aligned_cols=102 Identities=13% Similarity=0.188 Sum_probs=74.1
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
+++.+.++||||+|.||+.+|+.++ ..|.+ |.+||+++... +...+.+ + .....+++++++++|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~~~~~~~-~~~~~~~-------g-----~~~~~~~~~~~~~~Dv 71 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALY-RKGFRIVQVYSRTEESA-RELAQKV-------E-----AEYTTDLAEVNPYAKL 71 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSHHHH-HHHHHHT-------T-----CEEESCGGGSCSCCSE
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHH-HCCCeEEEEEeCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCE
Confidence 4566778999999999999999974 56888 89999986532 2211111 1 1223578888999999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccC
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vd 278 (328)
|++++|.. ....++ ++....+++++++|+++.|...+
T Consensus 72 vi~av~~~-~~~~v~-~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 72 YIVSLKDS-AFAELL-QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp EEECCCHH-HHHHHH-HHHHTTCCTTCEEEECCTTSCGG
T ss_pred EEEecCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCchH
Confidence 99999944 445544 45556788999999999987654
No 100
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.68 E-value=2.7e-07 Score=87.83 Aligned_cols=225 Identities=16% Similarity=0.181 Sum_probs=124.9
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHHHHh---c------CCccEEEecCCCCccHHHHHHhhccCCceEEEccccC
Q 020301 29 WINLLIEQDCRVEICTQKK--TILSVEDIIALI---G------DKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGY 97 (328)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~--~~~~~e~~~~~~---~------~~~d~li~~~~~~~~~~~l~~~~~l~~k~i~~~g~G~ 97 (328)
..+.|.+.|++|.+..... ..++.++..+.= . +++|.|+. ...+...+. . +.+.|...+.-.....
T Consensus 22 ~v~~l~~~g~~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~~ad~i~~-vksP~~~~~-~-~~~~g~~~~~y~~~~~ 98 (361)
T 1pjc_A 22 SVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWSREMVVK-VKEPLPAEY-D-LMQKDQLLFTYLHLAA 98 (361)
T ss_dssp HHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHHTSSEEEC-SSCCCGGGG-G-GCCTTCEEEECCCGGG
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHhcCCeEEE-ECCCCHHHH-H-hhcCCCEEEEEecccc
Confidence 3567777888876644322 345666554310 0 14777653 333433332 1 2222323333333344
Q ss_pred CccChhHHHhCCceEec---CCCCC-----CchHHHHHH--HHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCE
Q 020301 98 NNVDVNAANKYGIAVGN---TPGVL-----TETTAELAA--SLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQT 167 (328)
Q Consensus 98 d~id~~~~~~~gI~v~n---~p~~~-----~~~vAE~al--~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~t 167 (328)
+.-.++++.+.|+...| .|.-. -.++++.+= +.+++. .++.. ...|. +..-.. . ..+.+++
T Consensus 99 ~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA-~nt~~----~~~g~--G~~l~~-l-~~l~~~~ 169 (361)
T 1pjc_A 99 ARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGA-RFLER----QQGGR--GVLLGG-V-PGVKPGK 169 (361)
T ss_dssp CHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHH-HHTSG----GGTSC--CCCTTC-B-TTBCCCE
T ss_pred CHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHH-HHHhh----ccCCC--ceeccC-C-CCCCCCE
Confidence 44345667788887764 34321 133444433 334433 22211 01121 111000 1 2478899
Q ss_pred EEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCC
Q 020301 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD 247 (328)
Q Consensus 168 vgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt 247 (328)
+.|+|.|.+|+.+++.+ +.+|++|+++|+++... +...+.++.. . ........++.+.+..+|+|+.+++..
T Consensus 170 VlViGaGgvG~~aa~~a-~~~Ga~V~v~dr~~~r~-~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 170 VVILGGGVVGTEAAKMA-VGLGAQVQIFDINVERL-SYLETLFGSR-----V-ELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp EEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHHGGG-----S-EEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred EEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHHhhCce-----e-EeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 99999999999999996 79999999999986532 1111111000 0 000001125667788999999998753
Q ss_pred h-hhhccccHHHHhcCCCCcEEEEcCC
Q 020301 248 K-TTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 248 ~-~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
. .+..++.++.++.||+|++++|++-
T Consensus 242 ~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 242 GRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp TSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 3 2456678899999999999999973
No 101
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.66 E-value=9.6e-08 Score=89.19 Aligned_cols=96 Identities=19% Similarity=0.221 Sum_probs=71.2
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
.++++||||+|.||+.+++.+++.+|. +|.+|||++... +++.+.+ +. ......++++++++||+|++
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~-~~l~~~~-------~~---~~~~~~~~~e~v~~aDiVi~ 202 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENA-EKFADTV-------QG---EVRVCSSVQEAVAGADVIIT 202 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHH-HHHHHHS-------SS---CCEECSSHHHHHTTCSEEEE
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHH-HHHHHHh-------hC---CeEEeCCHHHHHhcCCEEEE
Confidence 467899999999999999987655687 899999987542 2222211 10 11234689999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~ 276 (328)
++|. +..++.. +.+++|.++++++....
T Consensus 203 atp~---~~~v~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 203 VTLA---TEPILFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp CCCC---SSCCBCG---GGSCTTCEEEECCCCST
T ss_pred EeCC---CCcccCH---HHcCCCcEEEeCCCCCC
Confidence 9984 3566655 57899999999976554
No 102
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.65 E-value=3.3e-08 Score=86.96 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=61.8
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
.++.+++++|||+|.||+.+|+.| ...|.+|++||+++. .+++||+|
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l-~~~g~~V~~~~~~~~--------------------------------~~~~aD~v 61 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNF-EIAGHEVTYYGSKDQ--------------------------------ATTLGEIV 61 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHH-HHTTCEEEEECTTCC--------------------------------CSSCCSEE
T ss_pred cccCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHH--------------------------------HhccCCEE
Confidence 468899999999999999999997 578999999987521 46789999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~ 276 (328)
++++| ++.++.++. +....++ ++++|++++|--
T Consensus 62 i~av~-~~~~~~v~~-~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 62 IMAVP-YPALAALAK-QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp EECSC-HHHHHHHHH-HTHHHHT-TSEEEECCCCBC
T ss_pred EEcCC-cHHHHHHHH-HHHHhcC-CCEEEEECCCCC
Confidence 99999 667777664 3445577 999999999765
No 103
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.65 E-value=9.2e-07 Score=81.16 Aligned_cols=170 Identities=17% Similarity=0.234 Sum_probs=108.0
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccChh
Q 020301 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (328)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~~~~~-~l~~~~~l~~k~i~~~g~G~d~id~~ 103 (328)
..++.|.+.+.+..++ ..+++|+.+.+. +..++++++.+ ..++++ +++...-. |=+ -|+-.+++-
T Consensus 57 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--KDV----Dg~~~~N~g 129 (285)
T 3p2o_A 57 ACEECGIKSLVYHLNE-NITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISS--KDV----DGFHPINVG 129 (285)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--GCT----TCCSHHHHH
T ss_pred HHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcc--ccc----ccCCHhhhh
Confidence 3455687776655433 357888877662 25789999864 345544 44444211 211 122222221
Q ss_pred HHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH-HHHHHHH
Q 020301 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYAR 182 (328)
Q Consensus 104 ~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~-IG~~vA~ 182 (328)
.. ..+.++.....++.-++-+ +++ .+.++.||++.|||.|. +|+.+|.
T Consensus 130 ~l------~~g~~~g~~PcTp~gv~~l----L~~---------------------~~i~l~Gk~vvVvGrs~iVG~p~A~ 178 (285)
T 3p2o_A 130 YL------NLGLESGFLPCTPLGVMKL----LKA---------------------YEIDLEGKDAVIIGASNIVGRPMAT 178 (285)
T ss_dssp HH------HTTCCSSCCCHHHHHHHHH----HHH---------------------TTCCCTTCEEEEECCCTTTHHHHHH
T ss_pred hh------hcCCCCCCCCCCHHHHHHH----HHH---------------------hCCCCCCCEEEEECCCchHHHHHHH
Confidence 11 1122331344555554322 221 13579999999999998 6999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcC
Q 020301 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATM 262 (328)
Q Consensus 183 ~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~m 262 (328)
.| ...|++|..++++. .++++.+++||+|+.+++. .++|..+. +
T Consensus 179 lL-~~~gAtVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~---v 222 (285)
T 3p2o_A 179 ML-LNAGATVSVCHIKT----------------------------KDLSLYTRQADLIIVAAGC----VNLLRSDM---V 222 (285)
T ss_dssp HH-HHTTCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSSC----TTCBCGGG---S
T ss_pred HH-HHCCCeEEEEeCCc----------------------------hhHHHHhhcCCEEEECCCC----CCcCCHHH---c
Confidence 97 68899999987532 4788999999999999983 45677765 4
Q ss_pred CCCcEEEEcCCCc
Q 020301 263 KKEAILVNCSRGP 275 (328)
Q Consensus 263 k~ga~lIN~aRG~ 275 (328)
|+|+++||++.-.
T Consensus 223 k~GavVIDVgi~~ 235 (285)
T 3p2o_A 223 KEGVIVVDVGINR 235 (285)
T ss_dssp CTTEEEEECCCEE
T ss_pred CCCeEEEEeccCc
Confidence 9999999998543
No 104
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.64 E-value=2.8e-07 Score=83.08 Aligned_cols=102 Identities=16% Similarity=0.220 Sum_probs=74.2
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
.++||||+|.||+.+|+.| ...|.+|.+||+++... +...+.| +. ....+++++++++|+|++++|
T Consensus 4 m~i~iiG~G~mG~~~a~~l-~~~g~~v~~~~~~~~~~-~~~~~~~-------g~-----~~~~~~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGL-KQTPHELIISGSSLERS-KEIAEQL-------AL-----PYAMSHQDLIDQVDLVILGIK 69 (259)
T ss_dssp CEEEEECCSHHHHHHHHHH-TTSSCEEEEECSSHHHH-HHHHHHH-------TC-----CBCSSHHHHHHTCSEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHH-HhCCCeEEEECCCHHHH-HHHHHHc-------CC-----EeeCCHHHHHhcCCEEEEEeC
Confidence 4799999999999999997 57789999999986532 2222111 21 124688999999999999999
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
.... .+.+..+++|.++|+...|- ..+.+.+.+..+
T Consensus 70 -~~~~-----~~v~~~l~~~~~vv~~~~~~--~~~~l~~~~~~~ 105 (259)
T 2ahr_A 70 -PQLF-----ETVLKPLHFKQPIISMAAGI--SLQRLATFVGQD 105 (259)
T ss_dssp -GGGH-----HHHHTTSCCCSCEEECCTTC--CHHHHHHHHCTT
T ss_pred -cHhH-----HHHHHHhccCCEEEEeCCCC--CHHHHHHhcCCC
Confidence 3333 34555677899999997664 345677777654
No 105
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.62 E-value=6.3e-08 Score=85.47 Aligned_cols=95 Identities=17% Similarity=0.228 Sum_probs=68.4
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.+++++|||+|.||+.+|+.| ...|.+|.+|||+.... +. +...+ .. ..+++++++++|+|+++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l-~~~g~~V~~~~r~~~~~-~~--------~~~~g-----~~-~~~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRL-VGSGFKVVVGSRNPKRT-AR--------LFPSA-----AQ-VTFQEEAVSSPEVIFVA 90 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHH-HHTTCCEEEEESSHHHH-HH--------HSBTT-----SE-EEEHHHHTTSCSEEEEC
T ss_pred CCCEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH--------HHHcC-----Cc-eecHHHHHhCCCEEEEC
Confidence 457899999999999999997 57799999999986432 11 11112 11 12788999999999999
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCCcccC
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vd 278 (328)
+|. .....++. +..+.+++++|++++|.-.+
T Consensus 91 v~~-~~~~~v~~---l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 91 VFR-EHYSSLCS---LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp SCG-GGSGGGGG---GHHHHTTCEEEECCCCCHHH
T ss_pred CCh-HHHHHHHH---HHHhcCCCEEEEeCCCcccc
Confidence 994 45556553 44344799999999987543
No 106
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.59 E-value=1.2e-07 Score=85.27 Aligned_cols=105 Identities=24% Similarity=0.345 Sum_probs=74.0
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc----EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM----NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~----~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
+++||||+|+||+.+|+.| ...|. +|.+|||++... +...+.+ + .....++++++++||+|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l-~~~g~~~~~~V~~~~r~~~~~-~~~~~~~-------g-----~~~~~~~~e~~~~aDvVi 68 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGM-INKNIVSSNQIICSDLNTANL-KNASEKY-------G-----LTTTTDNNEVAKNADILI 68 (247)
T ss_dssp CCEEEECCSHHHHHHHHHH-HHTTSSCGGGEEEECSCHHHH-HHHHHHH-------C-----CEECSCHHHHHHHCSEEE
T ss_pred CeEEEECccHHHHHHHHHH-HhCCCCCCCeEEEEeCCHHHH-HHHHHHh-------C-----CEEeCChHHHHHhCCEEE
Confidence 5799999999999999997 46787 999999986532 2221111 2 223468899999999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
+++| ......++ ++....++++.++|.+.-| +..+.|.+.+..
T Consensus 69 lav~-~~~~~~v~-~~l~~~l~~~~~vvs~~~g--i~~~~l~~~~~~ 111 (247)
T 3gt0_A 69 LSIK-PDLYASII-NEIKEIIKNDAIIVTIAAG--KSIESTENAFNK 111 (247)
T ss_dssp ECSC-TTTHHHHC----CCSSCTTCEEEECSCC--SCHHHHHHHHCS
T ss_pred EEeC-HHHHHHHH-HHHHhhcCCCCEEEEecCC--CCHHHHHHHhCC
Confidence 9997 33445555 4455668899999977655 445677777754
No 107
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.58 E-value=1.1e-06 Score=81.14 Aligned_cols=170 Identities=20% Similarity=0.193 Sum_probs=106.8
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccChh
Q 020301 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (328)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~~~~~-~l~~~~~l~~k~i~~~g~G~d~id~~ 103 (328)
..++.|.+.+....++ ..+++|+.+.+. +..++++++.+ ..++++ +++...-- |=+ -|+-.+++-
T Consensus 61 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~--KDV----DG~~~~N~G 133 (300)
T 4a26_A 61 AAAEVGMASFNVELPE-DISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPH--KDA----DALLPVNVG 133 (300)
T ss_dssp HHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGG--GCT----TCCSHHHHH
T ss_pred HHHHcCCeEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcc--ccc----ccCCcceEE
Confidence 4456788776655433 357888877663 25789999864 345544 44433211 111 122212211
Q ss_pred HHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH-HHHHHHH
Q 020301 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYAR 182 (328)
Q Consensus 104 ~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~-IG~~vA~ 182 (328)
.... |- ..++ ....+++-++.+ +++ .+.++.|+++.|||.|. +|+.+|+
T Consensus 134 ~l~~-g~---~~~~-~~PcTp~gv~~l----L~~---------------------~~i~l~Gk~vvVIG~s~iVG~p~A~ 183 (300)
T 4a26_A 134 LLHY-KG---REPP-FTPCTAKGVIVL----LKR---------------------CGIEMAGKRAVVLGRSNIVGAPVAA 183 (300)
T ss_dssp HHHC-TT---CCCS-CCCHHHHHHHHH----HHH---------------------HTCCCTTCEEEEECCCTTTHHHHHH
T ss_pred Eeec-CC---CcCC-CCCCCHHHHHHH----HHH---------------------cCCCCCCCEEEEECCCchHHHHHHH
Confidence 1111 10 0233 344555554422 221 13579999999999988 6999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHH--HHhhcCCEEEEcCCCChhhhccccHHHHh
Q 020301 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD--EVLREADVISLHPVLDKTTYHLINKERLA 260 (328)
Q Consensus 183 ~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--ell~~aDiV~l~~plt~~t~~li~~~~~~ 260 (328)
.| ...|++|++++++. .+++ +.+++||+|+.++|. .++|..+.
T Consensus 184 lL-~~~gAtVtv~~~~T----------------------------~~l~l~~~~~~ADIVI~Avg~----p~~I~~~~-- 228 (300)
T 4a26_A 184 LL-MKENATVTIVHSGT----------------------------STEDMIDYLRTADIVIAAMGQ----PGYVKGEW-- 228 (300)
T ss_dssp HH-HHTTCEEEEECTTS----------------------------CHHHHHHHHHTCSEEEECSCC----TTCBCGGG--
T ss_pred HH-HHCCCeEEEEeCCC----------------------------CCchhhhhhccCCEEEECCCC----CCCCcHHh--
Confidence 97 68899999998642 2455 899999999999994 34677765
Q ss_pred cCCCCcEEEEcCCC
Q 020301 261 TMKKEAILVNCSRG 274 (328)
Q Consensus 261 ~mk~ga~lIN~aRG 274 (328)
+|+|+++||++.-
T Consensus 229 -vk~GavVIDvgi~ 241 (300)
T 4a26_A 229 -IKEGAAVVDVGTT 241 (300)
T ss_dssp -SCTTCEEEECCCE
T ss_pred -cCCCcEEEEEecc
Confidence 5999999999853
No 108
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.57 E-value=9.8e-08 Score=87.60 Aligned_cols=92 Identities=18% Similarity=0.309 Sum_probs=69.1
Q ss_pred CEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
++|||||+ |.||+.+|+.| ...|.+|++||+++... +.. ...|. ...++.++++.||+|++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l-~~~g~~V~~~~r~~~~~-~~~--------~~~g~------~~~~~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKI-HDSAHHLAAIEIAPEGR-DRL--------QGMGI------PLTDGDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHSSSEEEEECCSHHHH-HHH--------HHTTC------CCCCSSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHH--------HhcCC------CcCCHHHHhcCCCEEEEcC
Confidence 58999999 99999999997 57799999999986432 111 11121 1236678899999999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
|.. .+..++ ++....+++++++|+++.|.
T Consensus 76 ~~~-~~~~v~-~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 76 PDN-IIEKVA-EDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp CHH-HHHHHH-HHHGGGSCTTCEEEESCSHH
T ss_pred Cch-HHHHHH-HHHHHhCCCCCEEEECCCCc
Confidence 943 355555 45556789999999998886
No 109
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.53 E-value=4.1e-07 Score=85.10 Aligned_cols=108 Identities=19% Similarity=0.287 Sum_probs=76.1
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCC----cEEEEEcCCch-hHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcC
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg----~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (328)
+...+|||||+|.||..+|+.|+ ..| .+|++|||++. ...+.. ..+ | .....+..++++.|
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~-~~G~~~~~~V~v~~r~~~~~~~~~l-~~~-------G-----~~~~~~~~e~~~~a 85 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFT-AAGVLAAHKIMASSPDMDLATVSAL-RKM-------G-----VKLTPHNKETVQHS 85 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHH-HTTSSCGGGEEEECSCTTSHHHHHH-HHH-------T-----CEEESCHHHHHHHC
T ss_pred cCCCEEEEECCCHHHHHHHHHHH-HCCCCCcceEEEECCCccHHHHHHH-HHc-------C-----CEEeCChHHHhccC
Confidence 34457999999999999999974 567 78999999864 122221 111 2 12235788999999
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
|+|++++| ......++ ++....++++.++|+++-|- ..+.|.+.+.+
T Consensus 86 DvVilav~-~~~~~~vl-~~l~~~l~~~~ivvs~s~gi--~~~~l~~~l~~ 132 (322)
T 2izz_A 86 DVLFLAVK-PHIIPFIL-DEIGADIEDRHIVVSCAAGV--TISSIEKKLSA 132 (322)
T ss_dssp SEEEECSC-GGGHHHHH-HHHGGGCCTTCEEEECCTTC--CHHHHHHHHHT
T ss_pred CEEEEEeC-HHHHHHHH-HHHHhhcCCCCEEEEeCCCC--CHHHHHHHHhh
Confidence 99999999 45566655 34555688999999997663 45567777764
No 110
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.53 E-value=4.2e-07 Score=83.45 Aligned_cols=112 Identities=12% Similarity=0.139 Sum_probs=77.8
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCc---EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
.++|||||+|+||+.+|+.++ .-|. +|.+|||++... ++..+.| + .....+..+++++||+|+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~-~~g~~~~~V~v~dr~~~~~-~~l~~~~-------g-----i~~~~~~~~~~~~aDvVi 68 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLI-ANGYDPNRICVTNRSLDKL-DFFKEKC-------G-----VHTTQDNRQGALNADVVV 68 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHH-HTTCCGGGEEEECSSSHHH-HHHHHTT-------C-----CEEESCHHHHHSSCSEEE
T ss_pred CCEEEEEcccHHHHHHHHHHH-HCCCCCCeEEEEeCCHHHH-HHHHHHc-------C-----CEEeCChHHHHhcCCeEE
Confidence 468999999999999999974 5677 899999987542 2221111 2 223468889999999999
Q ss_pred EcCCCChhhhccccHHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcC-CccEE
Q 020301 242 LHPVLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQN-PMFRV 294 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~-mk~ga~lIN~aRG~~vde~aL~~aL~~g-~i~ga 294 (328)
+++|. .....++ ++.-.. ++++.++|+++-| +..+.|.+.+..+ ++.++
T Consensus 69 lav~p-~~~~~vl-~~l~~~~l~~~~iiiS~~ag--i~~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 69 LAVKP-HQIKMVC-EELKDILSETKILVISLAVG--VTTPLIEKWLGKASRIVRA 119 (280)
T ss_dssp ECSCG-GGHHHHH-HHHHHHHHTTTCEEEECCTT--CCHHHHHHHHTCCSSEEEE
T ss_pred EEeCH-HHHHHHH-HHHHhhccCCCeEEEEecCC--CCHHHHHHHcCCCCeEEEE
Confidence 99983 3444444 333344 6888899988766 4467888888652 34443
No 111
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.53 E-value=3.7e-07 Score=88.87 Aligned_cols=124 Identities=15% Similarity=0.242 Sum_probs=81.7
Q ss_pred cccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhh--------hhhhhcCCCCCccccccCCH
Q 020301 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSM 230 (328)
Q Consensus 159 ~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l 230 (328)
.+++..-.+|+|||+|.||..+|..|+ . |.+|++||+++... +...... .+.... + .......+++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La-~-G~~V~~~D~~~~~v-~~l~~g~~~i~e~~l~~ll~~-~--~~~l~~ttd~ 103 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIA-Q-NHEVVALDIVQAKV-DMLNQKISPIVDKEIQEYLAE-K--PLNFRATTDK 103 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHH-HHHHTTCCSSCCHHHHHHHHH-S--CCCEEEESCH
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHH-c-CCeEEEEecCHHHh-hHHhccCCccccccHHHHHhh-c--cCCeEEEcCH
Confidence 456677779999999999999999975 5 99999999987532 1111000 000000 0 0112234688
Q ss_pred HHHhhcCCEEEEcCCCChhh-------hccc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 231 DEVLREADVISLHPVLDKTT-------YHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 231 ~ell~~aDiV~l~~plt~~t-------~~li--~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
++.++.||+|++++|...+. ..+. -+.... +++|+++|+.|.-.+--.+.+.+.+.+.
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 99999999999999954221 1221 144556 9999999999988877788888888764
No 112
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.47 E-value=8.5e-07 Score=81.97 Aligned_cols=130 Identities=13% Similarity=0.137 Sum_probs=80.4
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHH--HHh-hhhhhhhcCCCCCc-------------cccccCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVT-AYGQFLKANGEQPV-------------TWKRASS 229 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~--~~~-~~~~~~~~~~~~~~-------------~~~~~~~ 229 (328)
++|+|||.|.||..+|..++ ..|.+|++||+++...... ... .+. .....|.... ......+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la-~~G~~V~~~d~~~~~~~~~~~~i~~~l~-~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA-ATGHTVVLVDQTEDILAKSKKGIEESLR-KVAKKKFAENPKAGDEFVEKTLSTIATSTD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHHH-HHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHH-HHHHcCCCCccccchhhHHHHHhceEEecC
Confidence 68999999999999999985 5699999999986532110 000 000 0011121100 1122468
Q ss_pred HHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCC
Q 020301 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (328)
Q Consensus 230 l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~ 300 (328)
+++.++.||+|++++|...+.+.-+-++....++++++++..+.| +....+.+.+... -.-.++..+.
T Consensus 94 ~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~--i~~~~l~~~~~~~-~~~~g~h~~~ 161 (302)
T 1f0y_A 94 AASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS--LQITSIANATTRQ-DRFAGLHFFN 161 (302)
T ss_dssp HHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS--SCHHHHHTTSSCG-GGEEEEEECS
T ss_pred HHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC--CCHHHHHHhcCCc-ccEEEEecCC
Confidence 888899999999999976655443434555668899999855444 3445666655422 1235555554
No 113
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.42 E-value=3.4e-07 Score=82.57 Aligned_cols=101 Identities=18% Similarity=0.216 Sum_probs=69.2
Q ss_pred EEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
+|||||+|.||+.+|+.|+ ..| .+|.+|||++... +...+.| +. ....++++++ .+|+|++++|
T Consensus 2 ~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~r~~~~~-~~~~~~~-------g~-----~~~~~~~~~~-~~D~vi~~v~ 66 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLV-KQGGYRIYIANRGAEKR-ERLEKEL-------GV-----ETSATLPELH-SDDVLILAVK 66 (263)
T ss_dssp EEEEECCSHHHHHHHHHHH-HHCSCEEEEECSSHHHH-HHHHHHT-------CC-----EEESSCCCCC-TTSEEEECSC
T ss_pred EEEEECchHHHHHHHHHHH-HCCCCeEEEECCCHHHH-HHHHHhc-------CC-----EEeCCHHHHh-cCCEEEEEeC
Confidence 7999999999999999974 568 8999999986432 2221111 21 1234666778 9999999999
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
......++.+ +.. + +.++|+++.|-- .+.|.+.+..+
T Consensus 67 -~~~~~~v~~~--l~~-~-~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 67 -PQDMEAACKN--IRT-N-GALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp -HHHHHHHHTT--CCC-T-TCEEEECCTTCC--HHHHHHHTTSC
T ss_pred -chhHHHHHHH--hcc-C-CCEEEEecCCCC--HHHHHHHcCCC
Confidence 5555544431 222 4 899999965533 37777777664
No 114
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.41 E-value=9.1e-07 Score=86.22 Aligned_cols=118 Identities=10% Similarity=0.086 Sum_probs=77.3
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCC--------CccccccCCHHHHhhcCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLREAD 238 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~aD 238 (328)
+|+|||+|.||..+|..|+ ..|.+|++||+++... +...... ......+.. ........++++.++.||
T Consensus 2 kI~VIG~G~vG~~~A~~la-~~G~~V~~~d~~~~~~-~~l~~~~-~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLS-ARGHEVIGVDVSSTKI-DLINQGK-SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp EEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred EEEEECCCHHHHHHHHHHH-HCCCEEEEEECCHHHH-HHHhCCC-CCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 7999999999999999984 6799999999986532 1111000 000000000 001223467888999999
Q ss_pred EEEEcCCCChh---------hhccccHHHHhcCCC---CcEEEEcCCCcccC-HHHHHHHHHc
Q 020301 239 VISLHPVLDKT---------TYHLINKERLATMKK---EAILVNCSRGPVID-EVALVEHLKQ 288 (328)
Q Consensus 239 iV~l~~plt~~---------t~~li~~~~~~~mk~---ga~lIN~aRG~~vd-e~aL~~aL~~ 288 (328)
+|++|+|...+ .+..+ ++....+++ +.++|+.|...+-. .+.+.+.|++
T Consensus 79 vviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 79 VSFICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 99999995544 33332 444556788 99999998766545 5677777776
No 115
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.40 E-value=7.1e-07 Score=81.95 Aligned_cols=168 Identities=17% Similarity=0.173 Sum_probs=105.9
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CCccHHH-HHHhhccCCceEEEccccCCccChhH
Q 020301 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETL-FAALSRAGGKAFSNMAVGYNNVDVNA 104 (328)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~~~~~~-l~~~~~l~~k~i~~~g~G~d~id~~~ 104 (328)
-++.|.+.+.+..++ ..+++|+.+.+. +..|+++++.+ ..+++.. ++...-. | -+|.+-...
T Consensus 58 ~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~--K-------DVDG~~p~n 127 (288)
T 1b0a_A 58 CEEVGFVSRSYDLPE-TTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPD--K-------DVDGFHPYN 127 (288)
T ss_dssp HHHHTCEECCEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTT--T-------CTTCCSHHH
T ss_pred HHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCc--c-------CcccCCccc
Confidence 345577665444332 357888876662 25689999863 3444443 3332111 1 222222111
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH-HHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYARM 183 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~-IG~~vA~~ 183 (328)
. |-.+.+.++ ....+++-++.+ | ++ .+.++.|+++.|||.|. +|+.+|+.
T Consensus 128 ~---g~l~~g~~~-~~PcTp~gi~~l-l---~~---------------------~~i~l~gk~vvVIG~s~iVG~p~A~l 178 (288)
T 1b0a_A 128 V---GRLCQRAPR-LRPCTPRGIVTL-L---ER---------------------YNIDTFGLNAVVIGASNIVGRPMSME 178 (288)
T ss_dssp H---HHHHTTCCS-SCCHHHHHHHHH-H---HH---------------------TTCCCTTCEEEEECCCTTTHHHHHHH
T ss_pred h---hHHhCCCCC-CCCCcHHHHHHH-H---HH---------------------cCCCCCCCEEEEECCChHHHHHHHHH
Confidence 1 111122343 445566653322 2 21 13579999999999997 59999999
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCC
Q 020301 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMK 263 (328)
Q Consensus 184 l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk 263 (328)
| .+.|++|..++++. .++.+.+++||+|+.+++. .+++..+.+ |
T Consensus 179 L-~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~Avg~----p~lI~~~~v---k 222 (288)
T 1b0a_A 179 L-LLAGCTTTVTHRFT----------------------------KNLRHHVENADLLIVAVGK----PGFIPGDWI---K 222 (288)
T ss_dssp H-HTTTCEEEEECSSC----------------------------SCHHHHHHHCSEEEECSCC----TTCBCTTTS---C
T ss_pred H-HHCCCeEEEEeCCc----------------------------hhHHHHhccCCEEEECCCC----cCcCCHHHc---C
Confidence 7 68999999987532 4788999999999999983 336777664 8
Q ss_pred CCcEEEEcCCCc
Q 020301 264 KEAILVNCSRGP 275 (328)
Q Consensus 264 ~ga~lIN~aRG~ 275 (328)
+|+++||++.-.
T Consensus 223 ~GavVIDVgi~r 234 (288)
T 1b0a_A 223 EGAIVIDVGINR 234 (288)
T ss_dssp TTCEEEECCCEE
T ss_pred CCcEEEEccCCc
Confidence 999999998643
No 116
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.40 E-value=1.1e-06 Score=80.59 Aligned_cols=168 Identities=19% Similarity=0.223 Sum_probs=106.9
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccChh
Q 020301 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (328)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~~~~~-~l~~~~~l~~k~i~~~g~G~d~id~~ 103 (328)
..++.|.+.+.+..++ ..+++|+.+.+. +..++++++.+ ..+++. +++...-- |=+ -|+-.+++-
T Consensus 59 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~--KDV----DG~~~~N~g 131 (286)
T 4a5o_A 59 DCEEVGFLSQAYDLPA-ETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPD--KDV----DGFHPYNIG 131 (286)
T ss_dssp HHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGG--GCT----TCCSHHHHH
T ss_pred HHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcc--ccc----ccCChhhhH
Confidence 4456788776655433 357888876652 15789999864 345543 44433211 111 122212211
Q ss_pred HHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH-HHHHHHH
Q 020301 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYAR 182 (328)
Q Consensus 104 ~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~-IG~~vA~ 182 (328)
... .+.++ ....++.-++-+ +++ .+.++.||++.|||.|. +|+.+|.
T Consensus 132 ~l~------~g~~~-~~PcTp~gv~~l----L~~---------------------~~i~l~Gk~vvVvGrs~iVG~plA~ 179 (286)
T 4a5o_A 132 RLA------QRMPL-LRPCTPKGIMTL----LAS---------------------TGADLYGMDAVVVGASNIVGRPMAL 179 (286)
T ss_dssp HHH------TTCCS-SCCHHHHHHHHH----HHH---------------------TTCCCTTCEEEEECTTSTTHHHHHH
T ss_pred HHh------cCCCC-CCCCCHHHHHHH----HHH---------------------hCCCCCCCEEEEECCCchhHHHHHH
Confidence 111 12233 344555554322 221 13579999999999987 7999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcC
Q 020301 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATM 262 (328)
Q Consensus 183 ~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~m 262 (328)
.| .+.|++|..++++. .+|++.+++||+|+.+++. .++|..+.+
T Consensus 180 lL-~~~gAtVtv~hs~T----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~v--- 223 (286)
T 4a5o_A 180 EL-LLGGCTVTVTHRFT----------------------------RDLADHVSRADLVVVAAGK----PGLVKGEWI--- 223 (286)
T ss_dssp HH-HHTTCEEEEECTTC----------------------------SCHHHHHHTCSEEEECCCC----TTCBCGGGS---
T ss_pred HH-HHCCCeEEEEeCCC----------------------------cCHHHHhccCCEEEECCCC----CCCCCHHHc---
Confidence 97 68999999886531 3788999999999999983 456777654
Q ss_pred CCCcEEEEcCCC
Q 020301 263 KKEAILVNCSRG 274 (328)
Q Consensus 263 k~ga~lIN~aRG 274 (328)
|||+++||++.-
T Consensus 224 k~GavVIDvgi~ 235 (286)
T 4a5o_A 224 KEGAIVIDVGIN 235 (286)
T ss_dssp CTTCEEEECCSC
T ss_pred CCCeEEEEeccc
Confidence 999999999853
No 117
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.39 E-value=1.8e-06 Score=84.60 Aligned_cols=119 Identities=15% Similarity=0.169 Sum_probs=77.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCC--------CccccccCCHHHHhhcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLREA 237 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~a 237 (328)
.+|+|||+|.+|..+|..|+ ..|.+|++||+++... +...+.... ....+.. ........+++++++.|
T Consensus 3 mkI~VIG~G~vG~~lA~~La-~~G~~V~~~D~~~~~v-~~l~~g~~~-i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFA-ELGANVRCIDTDRNKI-EQLNSGTIP-IYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHHTCSC-CCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHH-hcCCEEEEEECCHHHH-HHHHcCCCc-ccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 58999999999999999985 6799999999986532 111110000 0000000 01122346889999999
Q ss_pred CEEEEcCCCCh---------hhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 238 DVISLHPVLDK---------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 238 DiV~l~~plt~---------~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
|+|++|+|... ..+..+ +.....+++|.++|+.|.-.+=..+.+.+.+++
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999999543 233333 556677899999999996444445566666654
No 118
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.38 E-value=1.2e-06 Score=82.28 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=75.2
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCC-Cccc-cccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-PVTW-KRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~ell~~aDiV~l~ 243 (328)
++++|||+|.||..+|..| ...|.+|.+||+++... +...+.++......+.. .... ....+++++++.+|+|+++
T Consensus 5 mki~iiG~G~~G~~~a~~L-~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYL-ALKGQSVLAWDIDAQRI-KEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 5899999999999999997 46799999999986432 22111110000000000 0000 1235888989999999999
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
+|.. .+..++ +.....+++++++|+. -|.......+.+.+.+
T Consensus 83 v~~~-~~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 83 VPAI-HHASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp SCGG-GHHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred CCch-HHHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 9954 445544 5556678999999998 4422344445666655
No 119
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.36 E-value=1.1e-06 Score=80.27 Aligned_cols=164 Identities=10% Similarity=0.136 Sum_probs=104.1
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CCccHHHH-HHhhccCCceEEEccccCCccChhH
Q 020301 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETLF-AALSRAGGKAFSNMAVGYNNVDVNA 104 (328)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~~~~~~l-~~~~~l~~k~i~~~g~G~d~id~~~ 104 (328)
-++.|. .+....++ ..+++|+.+.+. +..|+++++.+ ..+++..+ +...-. | -+|.+--.
T Consensus 52 ~~~~Gi-~~~~~lp~-~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~--K-------DVDG~~p~- 119 (276)
T 3ngx_A 52 GKKIGI-AVDLEKYD-DISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYY--K-------DVDALSPY- 119 (276)
T ss_dssp HHHHTC-EEEEEEES-SCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGG--G-------BTTCCSHH-
T ss_pred HHHCCe-EEEEECCC-CCCHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCC--C-------cccCCCcc-
Confidence 345677 65544433 357888887762 26789999864 44555433 222111 1 22222111
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH-HHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYARM 183 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~-IG~~vA~~ 183 (328)
..|-.+.+.++ ....++.-++.++ ++ .+ +.|+++.|||.|. +|+.+|+.
T Consensus 120 --n~G~l~~g~~~-~~PcTp~gv~~lL----~~---------------------~~--l~Gk~vvVvG~s~iVG~plA~l 169 (276)
T 3ngx_A 120 --NQGLIALNREF-LVPATPRAVIDIM----DY---------------------YG--YHENTVTIVNRSPVVGRPLSMM 169 (276)
T ss_dssp --HHHHHHTTCCS-SCCHHHHHHHHHH----HH---------------------HT--CCSCEEEEECCCTTTHHHHHHH
T ss_pred --chhhhhcCCCC-CCCCcHHHHHHHH----HH---------------------hC--cCCCEEEEEcCChHHHHHHHHH
Confidence 11111122344 3445555544222 11 12 8999999999986 79999999
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCC
Q 020301 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMK 263 (328)
Q Consensus 184 l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk 263 (328)
| .+.|++|++++++. .++++.+++||+|+.+++. .+++..+. +|
T Consensus 170 L-~~~gAtVtv~~~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~---vk 213 (276)
T 3ngx_A 170 L-LNRNYTVSVCHSKT----------------------------KDIGSMTRSSKIVVVAVGR----PGFLNREM---VT 213 (276)
T ss_dssp H-HHTTCEEEEECTTC----------------------------SCHHHHHHHSSEEEECSSC----TTCBCGGG---CC
T ss_pred H-HHCCCeEEEEeCCc----------------------------ccHHHhhccCCEEEECCCC----CccccHhh---cc
Confidence 7 68899999987531 4788999999999999984 34677765 49
Q ss_pred CCcEEEEcCCC
Q 020301 264 KEAILVNCSRG 274 (328)
Q Consensus 264 ~ga~lIN~aRG 274 (328)
+|+++||++.-
T Consensus 214 ~GavVIDvgi~ 224 (276)
T 3ngx_A 214 PGSVVIDVGIN 224 (276)
T ss_dssp TTCEEEECCCE
T ss_pred CCcEEEEeccC
Confidence 99999999853
No 120
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.36 E-value=2.2e-06 Score=74.61 Aligned_cols=123 Identities=12% Similarity=0.150 Sum_probs=81.7
Q ss_pred EEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 167 TVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 167 tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
+++|+| .|.||+.+|+.| ...|.+|.++||++... +...+.++.... .+ .. ...+++++++++|+|++++|
T Consensus 2 ~i~iiGa~G~~G~~ia~~l-~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-~~----~~-~~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRL-ATLGHEIVVGSRREEKA-EAKAAEYRRIAG-DA----SI-TGMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp EEEEETTTSHHHHHHHHHH-HTTTCEEEEEESSHHHH-HHHHHHHHHHHS-SC----CE-EEEEHHHHHHHCSEEEECSC
T ss_pred eEEEEcCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHHHhccccc-cC----CC-ChhhHHHHHhcCCEEEEeCC
Confidence 699999 999999999997 47799999999986432 221111110000 00 01 12578889999999999999
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcCCCcccC------------HHHHHHHHHcCCccEEEEeCCCCCCC
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVID------------EVALVEHLKQNPMFRVGLDVFEDEPY 304 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vd------------e~aL~~aL~~g~i~gaalDV~~~EP~ 304 (328)
...++.++. +....++ +.++|+++.|--.+ .+.|.+.+.. ...++++.++|.
T Consensus 74 -~~~~~~~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~~~~~ 137 (212)
T 1jay_A 74 -WEHAIDTAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALHTIPA 137 (212)
T ss_dssp -HHHHHHHHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCTTCCH
T ss_pred -hhhHHHHHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEccchHH
Confidence 344554443 3333454 89999999875533 5777777753 345688877764
No 121
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.36 E-value=1.3e-06 Score=79.95 Aligned_cols=169 Identities=18% Similarity=0.195 Sum_probs=109.1
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccChhH
Q 020301 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVNA 104 (328)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~~~~~-~l~~~~~l~~k~i~~~g~G~d~id~~~ 104 (328)
-++.|.+.+.+..++ ..+++|+.+.+. +..|+++++.+ ..+++. +++...-. |=| -|+..+++-.
T Consensus 57 ~~~~Gi~~~~~~lp~-~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~--KDV----DG~~p~n~g~ 129 (281)
T 2c2x_A 57 CAKVGITSIRRDLPA-DISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPA--KDA----DGLHPTNLGR 129 (281)
T ss_dssp HHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--GBT----TSCCHHHHHH
T ss_pred HHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCcc--CCc----cCCChhhHHH
Confidence 445687776655443 357888887663 26789999864 345444 34443211 211 1222222221
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCHH-HHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRI-GSAYARM 183 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~I-G~~vA~~ 183 (328)
. +.+.++ ....+++-++-++- + .+.++.|+++.|||.|.| |+.+|+.
T Consensus 130 l------~~g~~~-~~PcTp~gi~~ll~----~---------------------~~i~l~gk~vvVvG~s~iVG~p~A~l 177 (281)
T 2c2x_A 130 L------VLGTPA-PLPCTPRGIVHLLR----R---------------------YDISIAGAHVVVIGRGVTVGRPLGLL 177 (281)
T ss_dssp H------HHTCCC-CCCHHHHHHHHHHH----H---------------------TTCCCTTCEEEEECCCTTTHHHHHHH
T ss_pred H------hCCCCC-CCCChHHHHHHHHH----H---------------------cCCCCCCCEEEEECCCcHHHHHHHHH
Confidence 1 122343 45566666443222 1 135799999999999985 9999999
Q ss_pred HHhcC--CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhc
Q 020301 184 MVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (328)
Q Consensus 184 l~~~f--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~ 261 (328)
| ... |++|+.++++. .++.+.+++||+|+.+++. .++|..+.+
T Consensus 178 L-~~~g~~atVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~v-- 222 (281)
T 2c2x_A 178 L-TRRSENATVTLCHTGT----------------------------RDLPALTRQADIVVAAVGV----AHLLTADMV-- 222 (281)
T ss_dssp H-TSTTTCCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSCC----TTCBCGGGS--
T ss_pred H-hcCCCCCEEEEEECch----------------------------hHHHHHHhhCCEEEECCCC----CcccCHHHc--
Confidence 7 677 89999987532 4788999999999999983 336877764
Q ss_pred CCCCcEEEEcCCCcc
Q 020301 262 MKKEAILVNCSRGPV 276 (328)
Q Consensus 262 mk~ga~lIN~aRG~~ 276 (328)
|+|+++||++.-.+
T Consensus 223 -k~GavVIDVgi~r~ 236 (281)
T 2c2x_A 223 -RPGAAVIDVGVSRT 236 (281)
T ss_dssp -CTTCEEEECCEEEE
T ss_pred -CCCcEEEEccCCCC
Confidence 89999999987553
No 122
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.36 E-value=1.2e-06 Score=80.40 Aligned_cols=168 Identities=14% Similarity=0.226 Sum_probs=107.3
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccChh
Q 020301 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (328)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~~~~~-~l~~~~~l~~k~i~~~g~G~d~id~~ 103 (328)
..++.|.+.+....++ ..+++|+.+.+. +..++++++.+ ..++++ +++....- |=+ -|+-.+++-
T Consensus 58 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--KDV----DG~~~~N~G 130 (285)
T 3l07_A 58 ACAQVGIDSQVITLPE-HTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPE--KDV----DGFHPTNVG 130 (285)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGG--GBT----TCCSHHHHH
T ss_pred HHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcc--ccc----ccCChhhee
Confidence 3456687776655433 357888876662 25789999864 345544 44444211 211 122222221
Q ss_pred HHHhCCceEecC-CCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH-HHHHHH
Q 020301 104 AANKYGIAVGNT-PGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (328)
Q Consensus 104 ~~~~~gI~v~n~-p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~-IG~~vA 181 (328)
... .+. ++ ....++.-++.+ +++ .+.++.|+++.|||.|. +|+.+|
T Consensus 131 ~l~------~g~~~~-~~PcTp~gv~~l----L~~---------------------~~i~l~Gk~vvVIG~s~iVG~p~A 178 (285)
T 3l07_A 131 RLQ------LRDKKC-LESCTPKGIMTM----LRE---------------------YGIKTEGAYAVVVGASNVVGKPVS 178 (285)
T ss_dssp HHH------HTCTTC-CCCHHHHHHHHH----HHH---------------------TTCCCTTCEEEEECCCTTTHHHHH
T ss_pred ehh------cCCCCC-CCCCCHHHHHHH----HHH---------------------hCCCCCCCEEEEECCCchhHHHHH
Confidence 111 112 33 344555554422 211 13579999999999998 699999
Q ss_pred HHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhc
Q 020301 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (328)
Q Consensus 182 ~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~ 261 (328)
+.| .+.|++|..++++. .++++.+++||+|+.+++. .++|..+.
T Consensus 179 ~lL-~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 222 (285)
T 3l07_A 179 QLL-LNAKATVTTCHRFT----------------------------TDLKSHTTKADILIVAVGK----PNFITADM--- 222 (285)
T ss_dssp HHH-HHTTCEEEEECTTC----------------------------SSHHHHHTTCSEEEECCCC----TTCBCGGG---
T ss_pred HHH-HHCCCeEEEEeCCc----------------------------hhHHHhcccCCEEEECCCC----CCCCCHHH---
Confidence 997 68999999886531 4788999999999999983 45677765
Q ss_pred CCCCcEEEEcCCC
Q 020301 262 MKKEAILVNCSRG 274 (328)
Q Consensus 262 mk~ga~lIN~aRG 274 (328)
+|+|+++||++.-
T Consensus 223 vk~GavVIDvgi~ 235 (285)
T 3l07_A 223 VKEGAVVIDVGIN 235 (285)
T ss_dssp SCTTCEEEECCCE
T ss_pred cCCCcEEEEeccc
Confidence 4999999999853
No 123
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.35 E-value=1.4e-06 Score=80.41 Aligned_cols=169 Identities=14% Similarity=0.229 Sum_probs=107.4
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CC--ccHH-HHHHhhccCCceEEEccccCCccCh
Q 020301 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--ED--WGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (328)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~--~~~~-~l~~~~~l~~k~i~~~g~G~d~id~ 102 (328)
-++.|.+.+.+..++ ..+++|+.+.+. +..|+++++.+ .. +++. +++...-. | -+|.+-.
T Consensus 60 ~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~--K-------DVDG~hp 129 (301)
T 1a4i_A 60 AEEIGIKATHIKLPR-TTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPE--K-------DVDGLTS 129 (301)
T ss_dssp HHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGG--G-------BTTCCSH
T ss_pred HHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCC--C-------CccCCCh
Confidence 445687776655433 357788876653 26789999864 23 5554 33333211 2 2232221
Q ss_pred hHHHhCCceEecC--CCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH-HHHH
Q 020301 103 NAANKYGIAVGNT--PGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSA 179 (328)
Q Consensus 103 ~~~~~~gI~v~n~--p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~-IG~~ 179 (328)
... |-.+.+. ++ ....+++-++. +| ++ .+.++.|+++.|||.|. +|+.
T Consensus 130 ~N~---G~l~~g~~~~~-~~PcTp~gi~~-ll---~~---------------------~~i~l~gk~vvVIG~s~iVG~p 180 (301)
T 1a4i_A 130 INA---GRLARGDLNDC-FIPCTPKGCLE-LI---KE---------------------TGVPIAGRHAVVVGRSKIVGAP 180 (301)
T ss_dssp HHH---HHHHTTCCSSC-CCCHHHHHHHH-HH---HT---------------------TTCCCTTCEEEEECCCTTTHHH
T ss_pred hhH---HHHhcCCCCCC-ccCchHHHHHH-HH---HH---------------------cCCCCCCCEEEEECCCchHHHH
Confidence 111 1011111 32 34455655332 22 21 23579999999999996 6999
Q ss_pred HHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHH
Q 020301 180 YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERL 259 (328)
Q Consensus 180 vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~ 259 (328)
+|+.| .+.|++|..++++. .++.+.+++||+|+.+++. .++|..+.
T Consensus 181 ~A~lL-~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~- 226 (301)
T 1a4i_A 181 MHDLL-LWNNATVTTCHSKT----------------------------AHLDEEVNKGDILVVATGQ----PEMVKGEW- 226 (301)
T ss_dssp HHHHH-HHTTCEEEEECTTC----------------------------SSHHHHHTTCSEEEECCCC----TTCBCGGG-
T ss_pred HHHHH-HhCCCeEEEEECCc----------------------------ccHHHHhccCCEEEECCCC----cccCCHHH-
Confidence 99997 68999999987431 4789999999999999985 34687776
Q ss_pred hcCCCCcEEEEcCCCcc
Q 020301 260 ATMKKEAILVNCSRGPV 276 (328)
Q Consensus 260 ~~mk~ga~lIN~aRG~~ 276 (328)
+|||+++||++.-.+
T Consensus 227 --vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 227 --IKPGAIVIDCGINYV 241 (301)
T ss_dssp --SCTTCEEEECCCBC-
T ss_pred --cCCCcEEEEccCCCc
Confidence 479999999997553
No 124
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.34 E-value=3.2e-06 Score=82.68 Aligned_cols=119 Identities=14% Similarity=0.166 Sum_probs=78.2
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCC--------CccccccCCHHHHhhcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLREA 237 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~a 237 (328)
-+++|||+|.+|..+|..|+ ..|.+|++||+++... +....... .....+.. +......+++.+.++.|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La-~~G~~V~~~D~~~~kv-~~l~~g~~-~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~a 85 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFS-DFGHEVVCVDKDARKI-ELLHQNVM-PIYEPGLDALVASNVKAGRLSFTTDLAEGVKDA 85 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCSTTH-HHHTTTCC-SSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred eEEEEEcCCHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHhcCCC-CccCCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence 46999999999999999985 6799999999987542 21110000 00000000 01122346888999999
Q ss_pred CEEEEcCCCChh----------hhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 238 DVISLHPVLDKT----------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 238 DiV~l~~plt~~----------t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
|+|++|+|...+ .+..+ +.....+++|.++|+.|.-.+=-.+.+.+.+.+
T Consensus 86 Dvvii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 86 DAVFIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp SEEEECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999999984332 22322 556778999999999986554455667777665
No 125
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.33 E-value=1.3e-06 Score=78.75 Aligned_cols=99 Identities=23% Similarity=0.335 Sum_probs=68.4
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCC----cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
..+|||||+|.||+.+|+.|+ ..| .+|.+||+++.. .+.....+++++++.||+|
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~-~~g~~~~~~v~~~~~~~~~--------------------~g~~~~~~~~~~~~~~D~v 62 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIA-NANIIKKENLFYYGPSKKN--------------------TTLNYMSSNEELARHCDII 62 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHH-HHTSSCGGGEEEECSSCCS--------------------SSSEECSCHHHHHHHCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCCCCCeEEEEeCCccc--------------------CceEEeCCHHHHHhcCCEE
Confidence 357999999999999999974 456 689999987532 0112235788999999999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
++++| ....+.++. +....++ +..+|...-| ++.+.+.+.+.++
T Consensus 63 i~~v~-~~~~~~v~~-~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 63 VCAVK-PDIAGSVLN-NIKPYLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp EECSC-TTTHHHHHH-HSGGGCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred EEEeC-HHHHHHHHH-HHHHhcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 99999 455555543 3444554 5555555444 4445677777654
No 126
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.33 E-value=1.5e-06 Score=85.90 Aligned_cols=131 Identities=19% Similarity=0.267 Sum_probs=84.9
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHH--HH-hhhhhhhhcCCCCCc--------cccccCCHHHHh
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FV-TAYGQFLKANGEQPV--------TWKRASSMDEVL 234 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~--~~-~~~~~~~~~~~~~~~--------~~~~~~~l~ell 234 (328)
++|||||.|.||..+|..++ ..|.+|++||+++...... .. +.+.. ....|.... ......+++ .+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la-~aG~~V~l~D~~~e~l~~~~~~i~~~l~~-~~~~g~~~~~~~~~~~~~i~~~~~~~-~~ 82 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAA-SHGHQVLLYDISAEALTRAIDGIHARLNS-RVTRGKLTAETCERTLKRLIPVTDIH-AL 82 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHT-TTTTTSSCHHHHHHHHHTEEEECCGG-GG
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEECCHHHHHHHHHHHHHHHHH-HHHcCCCCHHHHHHHHhceeEeCCHH-Hh
Confidence 57999999999999999985 6699999999987542211 00 01100 011121110 111235665 58
Q ss_pred hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEE-EEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCC
Q 020301 235 READVISLHPVLDKTTYHLINKERLATMKKEAIL-VNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP 303 (328)
Q Consensus 235 ~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~l-IN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP 303 (328)
+.||+|+.++|...+.+.-+-++..+.++++++| .|+|.- ..+.|.+++.. .-.-.++..|.+-|
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti---~i~~ia~~~~~-p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI---SITAIAAEIKN-PERVAGLHFFNPAP 148 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS---CHHHHTTTSSS-GGGEEEEEECSSTT
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC---CHHHHHHHccC-ccceEEeeecChhh
Confidence 9999999999977766654556677789999999 577653 44566666643 34567777776544
No 127
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.29 E-value=4.2e-06 Score=79.53 Aligned_cols=118 Identities=13% Similarity=0.119 Sum_probs=77.1
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhh-cCCC-CCccccccCCHHHHhhcCCEEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGE-QPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~ell~~aDiV~l 242 (328)
.++|+|||.|.+|..+|..|+ ..|.+|..|++++... +...+ .+.... ..+. .+.......++++.++.||+|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La-~~G~~V~l~~r~~~~~-~~i~~-~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLA-RKGQKVRLWSYESDHV-DEMQA-EGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHH-TTTCCEEEECSCHHHH-HHHHH-HSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHH-HCCCeEEEEeCCHHHH-HHHHH-cCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 468999999999999999984 6789999999976431 11111 000000 0010 01112233688999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCH----HHHHHHHH
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE----VALVEHLK 287 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde----~aL~~aL~ 287 (328)
++|. ...+.++ ++....+++++++|+++-|-..++ +.+.+.+.
T Consensus 106 aVp~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~ 152 (356)
T 3k96_A 106 VVPS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELG 152 (356)
T ss_dssp CCCH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHC
T ss_pred CCCH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcC
Confidence 9993 3455544 455567889999999988766553 34445443
No 128
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.28 E-value=1.2e-06 Score=81.83 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=70.4
Q ss_pred cccccCCCEEEEEecCHH-HHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc---c--CCHHH
Q 020301 159 VGNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---A--SSMDE 232 (328)
Q Consensus 159 ~~~~l~g~tvgIiG~G~I-G~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~l~e 232 (328)
.+.++.|+++.|||.|.| |+.+|+.| .+.|++|+++||+.....+. ...-+........ . .++++
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L-~~~gAtVtv~nR~~~~l~~r--------a~~la~~~~~~t~~~~t~~~~L~e 241 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALL-ANDGATVYSVDVNNIQKFTR--------GESLKLNKHHVEDLGEYSEDLLKK 241 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHH-HTTSCEEEEECSSEEEEEES--------CCCSSCCCCEEEEEEECCHHHHHH
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHH-HHCCCEEEEEeCchHHHHhH--------HHHHhhhcccccccccccHhHHHH
Confidence 356899999999999975 99999997 68999999999874321100 0000000000000 1 47899
Q ss_pred HhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 233 ll~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
.+++||+|+.+++.. .-+|..+. +|+|+++||+|.-.
T Consensus 242 ~l~~ADIVIsAtg~p---~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 242 CSLDSDVVITGVPSE---NYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp HHHHCSEEEECCCCT---TCCBCTTT---SCTTEEEEECSSSC
T ss_pred HhccCCEEEECCCCC---cceeCHHH---cCCCeEEEEcCCCc
Confidence 999999999998841 22377766 48999999998653
No 129
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.25 E-value=4.1e-06 Score=82.67 Aligned_cols=120 Identities=17% Similarity=0.151 Sum_probs=76.6
Q ss_pred CEEEEEecCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCC-------CccccccCCHHHHhhcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-------PVTWKRASSMDEVLREA 237 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~ell~~a 237 (328)
.+|+|||+|.||..+|..|++. .|.+|++||+++... +....... .....+.. .......+++.+.++.|
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v-~~l~~g~~-~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKI-AEWNSDKL-PIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH-HHHTSSSC-SSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH-HHHHCCCC-CcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 5899999999999999998643 389999999986532 11100000 00000000 00122235777889999
Q ss_pred CEEEEcCCCChh--------------hhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 238 DVISLHPVLDKT--------------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 238 DiV~l~~plt~~--------------t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
|+|++|+|.... .... -+.....+++|.++|+.|.-.+=..+.+.+.|++
T Consensus 88 Dvvii~Vptp~~~~g~~~~~~~dl~~v~~~-~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 88 DLIFISVNTPTKMYGRGKGMAPDLKYVESV-SRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHH-HHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEecCCccccccccccCCCcHHHHHHH-HHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 999999985332 1222 2445677999999999886555445667777876
No 130
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.25 E-value=5e-06 Score=80.19 Aligned_cols=110 Identities=15% Similarity=0.230 Sum_probs=75.4
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCC-------------CccccccCCHHHH
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-------------PVTWKRASSMDEV 233 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~el 233 (328)
+|+|||+|.||..+|..|+ . |.+|++||+++... +.. ...+.. ........++.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La-~-G~~V~~~d~~~~~~-~~l--------~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~ 70 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLS-L-QNEVTIVDILPSKV-DKI--------NNGLSPIQDEYIEYYLKSKQLSIKATLDSKAA 70 (402)
T ss_dssp EEEEECCSHHHHHHHHHHT-T-TSEEEEECSCHHHH-HHH--------HTTCCSSCCHHHHHHHHHSCCCEEEESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHh-C-CCEEEEEECCHHHH-HHH--------HcCCCCcCCCCHHHHHHhccCcEEEeCCHHHH
Confidence 7999999999999999984 5 99999999986432 111 111110 0011223567888
Q ss_pred hhcCCEEEEcCCCCh----------hhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 234 LREADVISLHPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 234 l~~aDiV~l~~plt~----------~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
++.||+|++|+|... .....+ +.... ++++.++|+.+.-++-..+.+.+.+.+.
T Consensus 71 ~~~aDvviiavpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 71 YKEAELVIIATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp HHHCSEEEECCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred hcCCCEEEEecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 999999999999653 233333 34555 8899999997766665567777776554
No 131
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.24 E-value=5.8e-06 Score=74.87 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=75.7
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
+.| +++|||.|.+|+.++..| ...|+ +|++++|+..+. ++..+ ..+.....++++.++++|+|+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L-~~~G~~~I~v~nR~~~ka-~~la~------------~~~~~~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYAL-LQMGVKDIWVVNRTIERA-KALDF------------PVKIFSLDQLDEVVKKAKSLF 171 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHH-HHTTCCCEEEEESCHHHH-HTCCS------------SCEEEEGGGHHHHHHTCSEEE
T ss_pred CCC-eEEEECcHHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHHH------------HcccCCHHHHHhhhcCCCEEE
Confidence 568 899999999999999997 57898 899999986532 11100 111123357788899999999
Q ss_pred EcCCCChhh-hccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 242 LHPVLDKTT-YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 242 l~~plt~~t-~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
+++|..-.. ...++.+. ++++.+++++.-+ .+.-|.+|.+.|
T Consensus 172 natp~gm~p~~~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 172 NTTSVGMKGEELPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp ECSSTTTTSCCCSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred ECCCCCCCCCCCCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 999864211 22345444 4689999999888 666667777766
No 132
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.23 E-value=3.1e-06 Score=77.67 Aligned_cols=110 Identities=15% Similarity=0.140 Sum_probs=73.3
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|+.... ++ +. .........+++++++++|+|
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~a-~~--------la----~~~~~~~~~~~~~~~~~aDiV 179 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANEL-YKIVRPTLTVANRTMSRF-NN--------WS----LNINKINLSHAESHLDEFDII 179 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHH-HTTCCSCCEEECSCGGGG-TT--------CC----SCCEEECHHHHHHTGGGCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HH--------HH----HhcccccHhhHHHHhcCCCEE
Confidence 57899999999999999999997 58898 899999987531 10 00 011111234566778899999
Q ss_pred EEcCCCC--hhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 241 SLHPVLD--KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 241 ~l~~plt--~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
+.+.|.. ++....++ .+.++++.+++++.-.+. .+.-|.+|-+.|
T Consensus 180 InaTp~Gm~~~~~~~l~---~~~l~~~~~V~D~vY~P~-~T~ll~~A~~~G 226 (277)
T 3don_A 180 INTTPAGMNGNTDSVIS---LNRLASHTLVSDIVYNPY-KTPILIEAEQRG 226 (277)
T ss_dssp EECCC-------CCSSC---CTTCCSSCEEEESCCSSS-SCHHHHHHHHTT
T ss_pred EECccCCCCCCCcCCCC---HHHcCCCCEEEEecCCCC-CCHHHHHHHHCc
Confidence 9999964 23222233 456789999999987643 344344454445
No 133
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.23 E-value=3.5e-06 Score=78.44 Aligned_cols=109 Identities=19% Similarity=0.196 Sum_probs=72.0
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcC--CchhHHHHHHhhhhhhhhcCCCCC------ccccccC--CHHHHhhc
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQP------VTWKRAS--SMDEVLRE 236 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--~l~ell~~ 236 (328)
+|+|||.|.||..+|..|+ ..|.+|.+||+ ++.. .+.. ...+... ....... ++++.++.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~-~~g~~V~~~~r~~~~~~-~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 71 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLV-DNGNEVRIWGTEFDTEI-LKSI--------SAGREHPRLGVKLNGVEIFWPEQLEKCLEN 71 (335)
T ss_dssp EEEEESCCHHHHHHHHHHH-HHCCEEEEECCGGGHHH-HHHH--------HTTCCBTTTTBCCCSEEEECGGGHHHHHTT
T ss_pred EEEEECcCHHHHHHHHHHH-hCCCeEEEEEccCCHHH-HHHH--------HHhCcCcccCccccceEEecHHhHHHHHhc
Confidence 7999999999999999974 56889999999 6432 1211 1111100 0001223 67788899
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc---cc-CHHHHHHHHHc
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP---VI-DEVALVEHLKQ 288 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~---~v-de~aL~~aL~~ 288 (328)
+|+|++++|. ..+..++ +.... ++++.++|+++.|- -. ..+.+.+.+.+
T Consensus 72 ~D~vi~~v~~-~~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 72 AEVVLLGVST-DGVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp CSEEEECSCG-GGHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred CCEEEEcCCh-HHHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 9999999994 3555544 34445 88899999998774 11 22446666654
No 134
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.22 E-value=3.4e-06 Score=79.34 Aligned_cols=108 Identities=17% Similarity=0.187 Sum_probs=70.0
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCC-------cEEEEEcCCchh----HHHHHHhhhhhhhh-cCCC-CCccccccCCHH
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQAT----RLEKFVTAYGQFLK-ANGE-QPVTWKRASSMD 231 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg-------~~V~~~d~~~~~----~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~ 231 (328)
.++|+|||.|.||..+|..|+ ..| .+|.+||++... ..+.... .+.... ..+. .+.......+++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~-~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVG-GNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINT-QHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHH-HSCCTTTSTTCCCCTTEEEESSHH
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCcccCCCCeEEEEEcChhhhhhHHHHHHHh-cCcccccCCcccCccCeEEEcCHH
Confidence 358999999999999999975 446 899999998651 1111110 000000 0010 011122235788
Q ss_pred HHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc
Q 020301 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (328)
Q Consensus 232 ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~ 276 (328)
++++.||+|++++|. ..+..++ ++....+++++++|+++.|-.
T Consensus 86 ~~~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 86 QAAEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHHTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HHHcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 989999999999993 4555544 344566789999999988754
No 135
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.20 E-value=2.1e-06 Score=70.69 Aligned_cols=103 Identities=12% Similarity=0.120 Sum_probs=74.5
Q ss_pred cCCCEEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCC
Q 020301 163 LKGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (328)
Q Consensus 163 l~g~tvgIiG~----G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (328)
.+-++|+|||. |.+|+.+++.| ...|.+|+.+||..... .+...+.+++|+....|
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L-~~~G~~V~~vnp~~~~i-------------------~G~~~~~s~~el~~~vD 71 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDL-LSKGFEVLPVNPNYDEI-------------------EGLKCYRSVRELPKDVD 71 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSEE-------------------TTEECBSSGGGSCTTCC
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHH-HHCCCEEEEeCCCCCeE-------------------CCeeecCCHHHhCCCCC
Confidence 45678999999 99999999997 57799988888764210 12233568999999999
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
++++++| .+....++. +..+ ...++++++++. ..+.|.++.++..+.
T Consensus 72 lvii~vp-~~~v~~v~~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 72 VIVFVVP-PKVGLQVAK-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp EEEECSC-HHHHHHHHH-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred EEEEEeC-HHHHHHHHH-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 9999999 566677664 3444 666777777743 256777777765554
No 136
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.19 E-value=6e-06 Score=81.48 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=74.6
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCC--------CccccccCCHHHHhhc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLRE 236 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~ 236 (328)
..+|+|||+|.||..+|..|+ ..|.+|++||+++... +...... ......+.. .......+++++.++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la-~~G~~V~~~d~~~~~v-~~l~~~~-~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLA-DIGHDVFCLDVDQAKI-DILNNGG-VPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHH-hCCCEEEEEECCHHHH-HHHHCCC-CCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 358999999999999999985 6799999999986432 2111100 000000100 0012234578888999
Q ss_pred CCEEEEcCCCC---------hhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 237 ADVISLHPVLD---------KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 237 aDiV~l~~plt---------~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
||+|++|+|.. ...+..+ +.....+++++++|+.+.-.+=..+.+.+.+.+
T Consensus 85 aDvviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 85 GDVQFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CCEEEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999999942 2333333 445567999999999984323233445555543
No 137
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.18 E-value=1.3e-05 Score=78.70 Aligned_cols=131 Identities=17% Similarity=0.196 Sum_probs=79.3
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHH--HHHh-hhhhh-----hhcCCCCCccccccCCHHHHhhc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE--KFVT-AYGQF-----LKANGEQPVTWKRASSMDEVLRE 236 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~--~~~~-~~~~~-----~~~~~~~~~~~~~~~~l~ell~~ 236 (328)
-++|||||.|.||..+|..++ ..|.+|++||+++..... +... .+... ...............++ +.++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la-~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~ 114 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELST 114 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTT
T ss_pred CCEEEEECcCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCC
Confidence 468999999999999999974 679999999998753211 0000 00000 00000001001113466 46899
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~ 300 (328)
||+|+.++|...+.+.-+-++.-..++++++|+..+.+ +....|.++++. .-.-.++..|.
T Consensus 115 aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~--~~~~~la~~~~~-~~~~ig~hf~~ 175 (463)
T 1zcj_A 115 VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDR-PQLVIGTHFFS 175 (463)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEEECS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--cCHHHHHHHhcC-CcceEEeecCC
Confidence 99999999965544444445566678999999874333 344567766643 22346666663
No 138
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.17 E-value=2e-06 Score=81.43 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=69.4
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhh-cCCC-CCccccccCCHHHHhhcCCEEEEcC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGE-QPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
+|+|||.|.||..+|..| ...|.+|.+||+++... +...+. +.... ..+. .+.......+++++++.||+|++++
T Consensus 17 kI~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~~~-~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav 93 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVL-SKKCREVCVWHMNEEEV-RLVNEK-RENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 93 (366)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTEEEEEEECSCHHHH-HHHHHH-TBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECC
T ss_pred eEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHHc-CcccccccccccccceeeeCCHHHHHcCCCEEEECC
Confidence 899999999999999997 46789999999986432 211110 00000 0000 0111223357889999999999999
Q ss_pred CCChhhhccccHH---HHhcCCC-CcEEEEcCCCccc
Q 020301 245 VLDKTTYHLINKE---RLATMKK-EAILVNCSRGPVI 277 (328)
Q Consensus 245 plt~~t~~li~~~---~~~~mk~-ga~lIN~aRG~~v 277 (328)
|. ..+..++... ....+++ ++++|+++.|-..
T Consensus 94 ~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 94 PT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp CH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred Ch-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 93 5555555331 4455678 8999999877443
No 139
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.16 E-value=8.3e-06 Score=84.28 Aligned_cols=129 Identities=19% Similarity=0.181 Sum_probs=81.7
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHH--HHH-hhhhhhhhcCCCCCc--------cccccCCHHHH
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE--KFV-TAYGQFLKANGEQPV--------TWKRASSMDEV 233 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~--~~~-~~~~~~~~~~~~~~~--------~~~~~~~l~el 233 (328)
=++|||||.|.||..+|..++ ..|.+|++||+++..... ... +.+. .....|.... ......++ +.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~~~~i~~~l~-~~~~~G~~~~~~~~~~~~~i~~~~d~-~~ 390 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSA-SKGTPILMKDINEHGIEQGLAEAAKLLV-GRVDKGRMTPAKMAEVLNGIRPTLSY-GD 390 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHH-HTTCCEEEECSSHHHHHHHHHHHHHHHH-HHHTTTSSCHHHHHHHHHHEEEESSS-TT
T ss_pred CCEEEEECCChhhHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHHHH-HHHhcCCCCHHHHHHHhcCeEEECCH-HH
Confidence 357999999999999999985 569999999998753211 000 0000 0111221100 01123456 67
Q ss_pred hhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHcCCccEEEEeCCC
Q 020301 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (328)
Q Consensus 234 l~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lI-N~aRG~~vde~aL~~aL~~g~i~gaalDV~~ 300 (328)
++.||+|+.++|.+.+.+.-+-++..+.++++++|+ |+|. +....+.+.+.. .-.-.++..|.
T Consensus 391 ~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt---l~i~~la~~~~~-~~~~ig~hf~~ 454 (715)
T 1wdk_A 391 FGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST---ISISLLAKALKR-PENFVGMHFFN 454 (715)
T ss_dssp GGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS---SCHHHHGGGCSC-GGGEEEEECCS
T ss_pred HCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC---CCHHHHHHHhcC-ccceEEEEccC
Confidence 899999999999877766545456667889999997 5543 344566665532 22346777766
No 140
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.15 E-value=1.6e-05 Score=74.18 Aligned_cols=95 Identities=18% Similarity=0.299 Sum_probs=66.3
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
..++++|||.|.+|+..++.+++.++ -+|.+|||+ +. +++.+.+.. ..+. ..... ++++++++||+|++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a--~~la~~l~~---~~g~---~~~~~-~~~eav~~aDIVi~ 189 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-AS--PEILERIGR---RCGV---PARMA-APADIAAQADIVVT 189 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CC--HHHHHHHHH---HHTS---CEEEC-CHHHHHHHCSEEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HH--HHHHHHHHH---hcCC---eEEEe-CHHHHHhhCCEEEE
Confidence 35789999999999999998754444 589999999 32 222222110 0121 11233 89999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
|.|.+ ..++.. +.+|||+++++++.-
T Consensus 190 aT~s~---~pvl~~---~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 190 ATRST---TPLFAG---QALRAGAFVGAIGSS 215 (313)
T ss_dssp CCCCS---SCSSCG---GGCCTTCEEEECCCS
T ss_pred ccCCC---CcccCH---HHcCCCcEEEECCCC
Confidence 99853 456654 357999999998753
No 141
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.14 E-value=5.1e-06 Score=81.87 Aligned_cols=116 Identities=15% Similarity=0.147 Sum_probs=73.3
Q ss_pred CEEEEEecCHHHHHHHHHHHhcC-Cc-EEEEEcCCchh---HHHHHHhhhhhhh--hcCCCC--------CccccccCCH
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGF-KM-NLIYYDLYQAT---RLEKFVTAYGQFL--KANGEQ--------PVTWKRASSM 230 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~f-g~-~V~~~d~~~~~---~~~~~~~~~~~~~--~~~~~~--------~~~~~~~~~l 230 (328)
++|+|||+|.+|..+|..|+ .. |. +|++||+++.+ ..+....... .. ...+.. .......++
T Consensus 19 mkIaVIGlG~mG~~lA~~la-~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~-~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFA-DAPCFEKVLGFQRNSKSSGYKIEMLNRGES-PLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HSTTCCEEEEECCCCTTTTTHHHHHTTTCC-CSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CEEEEECcCHHHHHHHHHHH-HhCCCCeEEEEECChhHhHHHHHHHHhcCC-CccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 58999999999999999985 56 88 99999998761 1111110000 00 000000 001111234
Q ss_pred HHHhhcCCEEEEcCCCCh--------hhhccc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 020301 231 DEVLREADVISLHPVLDK--------TTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVE 284 (328)
Q Consensus 231 ~ell~~aDiV~l~~plt~--------~t~~li--~~~~~~~mk~ga~lIN~aRG~~vde~aL~~ 284 (328)
.+.++.||+|++|+|... ++..+. -+.....+++|.++|+.|.-.+=-.+.+.+
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 678899999999999542 222232 245677899999999998766655556654
No 142
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.12 E-value=6.1e-06 Score=73.53 Aligned_cols=96 Identities=24% Similarity=0.260 Sum_probs=71.3
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEE-EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh-hcCCEEEEcC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~~ 244 (328)
++||||+|.||+.+++.+. .-|+++ .+||++... + . .+.++++++ .++|+|++|+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~--~----------------~----~~~~~~~l~~~~~DvVv~~~ 58 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEH--E----------------K----MVRGIDEFLQREMDVAVEAA 58 (236)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCC--T----------------T----EESSHHHHTTSCCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcch--h----------------h----hcCCHHHHhcCCCCEEEECC
Confidence 7999999999999999974 678887 688987421 0 0 246899999 6999999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCcccCH---HHHHHHHHcCC
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNP 290 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde---~aL~~aL~~g~ 290 (328)
|. +... +.....++.|..+|..+-+..-+. +.|.++.++..
T Consensus 59 ~~--~~~~---~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g 102 (236)
T 2dc1_A 59 SQ--QAVK---DYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTG 102 (236)
T ss_dssp CH--HHHH---HHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHC
T ss_pred CH--HHHH---HHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcC
Confidence 93 2211 223455678999999988887666 67777776633
No 143
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.12 E-value=9.5e-06 Score=78.95 Aligned_cols=112 Identities=20% Similarity=0.236 Sum_probs=73.2
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHH--------
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV-------- 233 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el-------- 233 (328)
--+|+++.|||+|.+|..+|..|+ ..|.+|++||+++... +... .+..+. ....++++
T Consensus 8 ~~~~~~~~ViGlGyvGlp~A~~La-~~G~~V~~~D~~~~kv-~~L~---------~g~~pi---~epgl~~ll~~~~~~g 73 (431)
T 3ojo_A 8 HHHGSKLTVVGLGYIGLPTSIMFA-KHGVDVLGVDINQQTI-DKLQ---------NGQISI---EEPGLQEVYEEVLSSG 73 (431)
T ss_dssp ----CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHHH-HHHH---------TTCCSS---CCTTHHHHHHHHHHTT
T ss_pred cccCCccEEEeeCHHHHHHHHHHH-HCCCEEEEEECCHHHH-HHHH---------CCCCCc---CCCCHHHHHHhhcccC
Confidence 357899999999999999999985 6799999999987542 2111 111111 01122222
Q ss_pred -------hhcCCEEEEcCCCChhh--------hccc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 020301 234 -------LREADVISLHPVLDKTT--------YHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLK 287 (328)
Q Consensus 234 -------l~~aDiV~l~~plt~~t--------~~li--~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~ 287 (328)
++.||+|++|+|..... ..+. -+...+.|++|+++|+.|.-.+=-.+.+.+.+.
T Consensus 74 ~l~~ttd~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 74 KLKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp CEEEESSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHH
T ss_pred ceEEeCchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHH
Confidence 35799999999954321 1232 245677799999999999766656667766543
No 144
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.10 E-value=1.6e-05 Score=73.57 Aligned_cols=114 Identities=16% Similarity=0.170 Sum_probs=75.1
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
++.|++++|+|.|.+|+.+|..| ...|+ +|++++|+... .++..+.++ ..........++.+.+.++|+|
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L-~~~G~~~V~v~nR~~~k-a~~la~~~~-------~~~~~~~~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSL-LSTAAERIDMANRTVEK-AERLVREGD-------ERRSAYFSLAEAETRLAEYDII 208 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECSSHHH-HHHHHHHSC-------SSSCCEECHHHHHHTGGGCSEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHH-HHCCCCEEEEEeCCHHH-HHHHHHHhh-------hccCceeeHHHHHhhhccCCEE
Confidence 47799999999999999999997 57898 99999998643 222222211 1000011112566778999999
Q ss_pred EEcCCCChhhh--c-cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 241 SLHPVLDKTTY--H-LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 241 ~l~~plt~~t~--~-li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
+.++|...... . .++ .+.++++.+++|++-.+ ..+. |.++.++.
T Consensus 209 In~t~~~~~~~~~~~~i~---~~~l~~~~~v~D~~y~P-~~T~-ll~~A~~~ 255 (297)
T 2egg_A 209 INTTSVGMHPRVEVQPLS---LERLRPGVIVSDIIYNP-LETK-WLKEAKAR 255 (297)
T ss_dssp EECSCTTCSSCCSCCSSC---CTTCCTTCEEEECCCSS-SSCH-HHHHHHHT
T ss_pred EECCCCCCCCCCCCCCCC---HHHcCCCCEEEEcCCCC-CCCH-HHHHHHHC
Confidence 99999664311 1 233 34578999999998753 3343 55555543
No 145
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.10 E-value=1.6e-05 Score=82.31 Aligned_cols=129 Identities=19% Similarity=0.180 Sum_probs=79.6
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHH--HH-hhhhhhhhcCCCCC--------ccccccCCHHHHh
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FV-TAYGQFLKANGEQP--------VTWKRASSMDEVL 234 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~--~~-~~~~~~~~~~~~~~--------~~~~~~~~l~ell 234 (328)
++|||||.|.||..+|..++ ..|.+|++||+++...... .. +.+.. ....|... .......++ +.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~~~~i~~~l~~-~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 389 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALI-LSNYPVILKEVNEKFLEAGIGRVKANLQS-RVRKGSMSQEKFEKTMSLLKGSLDY-ESF 389 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHH-TTTCCEEEECSSHHHHHHHHHHHHHHHHH-TTC----CTTHHHHTTTSEEEESSS-GGG
T ss_pred cEEEEEcCCHhhHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHHHHH-HHhcCCCCHHHHHHHhcceEEeCCH-HHH
Confidence 67999999999999999975 6799999999987532111 00 00000 01111100 011123456 568
Q ss_pred hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCC
Q 020301 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (328)
Q Consensus 235 ~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~ 300 (328)
+.||+|+.++|.+.+.+.-+-++..+.++++++++..+.+ +....+.+.++. .-.-.++..|.
T Consensus 390 ~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-p~~~iG~hf~~ 452 (725)
T 2wtb_A 390 RDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKS-QDRIVGAHFFS 452 (725)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSC-TTTEEEEEECS
T ss_pred CCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcC-CCCEEEecCCC
Confidence 9999999999977766554545666789999998643332 334556655532 22346666666
No 146
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.10 E-value=1.7e-05 Score=75.11 Aligned_cols=99 Identities=17% Similarity=0.224 Sum_probs=68.9
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
..+++||||.|.+|+.+++.++...+ -+|.+|||++.. .+++.+.+. .. .......+.++++++++||+|++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~-a~~la~~~~----~~--~g~~~~~~~~~~eav~~aDiVi~ 200 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLA-TAKLIANLK----EY--SGLTIRRASSVAEAVKGVDIITT 200 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHH-HHHHHHHHT----TC--TTCEEEECSSHHHHHTTCSEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHH-HHHHHHHHH----hc--cCceEEEeCCHHHHHhcCCEEEE
Confidence 46789999999999999987644444 589999998753 233333221 10 01112335689999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|.|.. ....++.. +.+++|..+++++.
T Consensus 201 aTps~-~~~pvl~~---~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 201 VTADK-AYATIITP---DMLEPGMHLNAVGG 227 (350)
T ss_dssp CCCCS-SEEEEECG---GGCCTTCEEEECSC
T ss_pred eccCC-CCCceecH---HHcCCCCEEEECCC
Confidence 99965 23445554 46789999999975
No 147
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.10 E-value=2.3e-06 Score=72.93 Aligned_cols=100 Identities=11% Similarity=0.157 Sum_probs=65.4
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC---HHHH--h
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV--L 234 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el--l 234 (328)
.++.+.+++|+|+|.+|+.+|+.| +.. |.+|+++|+++... +. ++..+..... ....+ +.++ +
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L-~~~~g~~V~vid~~~~~~-~~--------~~~~g~~~~~-gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDEL-RARYGKISLGIEIREEAA-QQ--------HRSEGRNVIS-GDATDPDFWERILDT 103 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHH-HHHHCSCEEEEESCHHHH-HH--------HHHTTCCEEE-CCTTCHHHHHTBCSC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHH-HhccCCeEEEEECCHHHH-HH--------HHHCCCCEEE-cCCCCHHHHHhccCC
Confidence 457788999999999999999997 577 99999999986532 11 1122221110 01122 3444 6
Q ss_pred hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 235 ~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.++|+|++++|..+.+..++ ..++.+.++..+|..+.
T Consensus 104 ~~ad~vi~~~~~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 104 GHVKLVLLAMPHHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CCCCEEEECCSSHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred CCCCEEEEeCCChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 78999999999644444333 35666776667766544
No 148
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.09 E-value=5.2e-06 Score=79.05 Aligned_cols=106 Identities=12% Similarity=0.134 Sum_probs=67.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCC-------cEEEEEcCCchh----HHHHHHhhhhhhhh-cCCC-CCccccccCCHHH
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQAT----RLEKFVTAYGQFLK-ANGE-QPVTWKRASSMDE 232 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg-------~~V~~~d~~~~~----~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~e 232 (328)
++|+|||.|.||..+|..|+ .-| .+|.+||+++.. ..+...+ .+.... ..+. .+.+.....++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~-~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVG-TNAKNNYLFENEVRMWIRDEFVNGERMVDIINN-KHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHH-HHHHHCTTBCSCEEEECCSCC---CCHHHHHHH-HCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CEEEEECcCHHHHHHHHHHH-HcCCccCCCCCeEEEEECChhhhhHHHHHHHHh-cCcccccCCcccCcCCeEEECCHHH
Confidence 47999999999999999985 346 889999997641 1111111 000000 0010 0112223457888
Q ss_pred HhhcCCEEEEcCCCChhhhccccHHHHh----cCCCCcEEEEcCCCc
Q 020301 233 VLREADVISLHPVLDKTTYHLINKERLA----TMKKEAILVNCSRGP 275 (328)
Q Consensus 233 ll~~aDiV~l~~plt~~t~~li~~~~~~----~mk~ga~lIN~aRG~ 275 (328)
+++.||+|++++| +...+.++ ++... .+++++++|+++.|-
T Consensus 100 a~~~aDvVilav~-~~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 100 VINDADLLIFIVP-CQYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp HHTTCSEEEECCC-HHHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred HHcCCCEEEEcCC-HHHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 8999999999999 35555554 23334 678899999998773
No 149
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.09 E-value=4.4e-06 Score=73.68 Aligned_cols=93 Identities=22% Similarity=0.234 Sum_probs=61.1
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
-+++||||.|.||+.+|+.|+ ..|.+|.+ |||++... ++..+.+ +.. ...+..+.++.+|+|+++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~-~~g~~V~~v~~r~~~~~-~~l~~~~-------g~~-----~~~~~~~~~~~aDvVila 88 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFT-AAQIPAIIANSRGPASL-SSVTDRF-------GAS-----VKAVELKDALQADVVILA 88 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHH-HTTCCEEEECTTCGGGG-HHHHHHH-------TTT-----EEECCHHHHTTSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCEEEEEECCCHHHH-HHHHHHh-------CCC-----cccChHHHHhcCCEEEEe
Confidence 468999999999999999974 67899998 99986532 2221111 111 112445568999999999
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
+|. .....++.+ +.. .++.++|+++-|-
T Consensus 89 vp~-~~~~~v~~~--l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 89 VPY-DSIADIVTQ--VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp SCG-GGHHHHHTT--CSC-CTTCEEEECCCCB
T ss_pred CCh-HHHHHHHHH--hhc-cCCCEEEEcCCCC
Confidence 992 233333321 122 3588999998553
No 150
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.08 E-value=5.2e-06 Score=75.44 Aligned_cols=95 Identities=11% Similarity=0.093 Sum_probs=64.5
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCc--cc-cccCCHHHHhhcCCEEEEc
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TW-KRASSMDEVLREADVISLH 243 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l~ell~~aDiV~l~ 243 (328)
+|+|||.|.||..+|..|+ ..|.+|.+||++.... +. +...+.... .. ....+ .+.++.+|+|+++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~~~~~-~~--------l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~ 70 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALC-KQGHEVQGWLRVPQPY-CS--------VNLVETDGSIFNESLTAND-PDFLATSDLLLVT 70 (291)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEECSSCCSE-EE--------EEEECTTSCEEEEEEEESC-HHHHHTCSEEEEC
T ss_pred eEEEECcCHHHHHHHHHHH-hCCCCEEEEEcCccce-ee--------EEEEcCCCceeeeeeeecC-ccccCCCCEEEEE
Confidence 7999999999999999984 6789999999986431 10 111111000 00 01233 4677899999999
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
+|.. .+..++ ++....+++++++|++.-|
T Consensus 71 v~~~-~~~~v~-~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 71 LKAW-QVSDAV-KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp SCGG-GHHHHH-HHHHTTSCTTSCEEEECSS
T ss_pred ecHH-hHHHHH-HHHHhhCCCCCEEEEecCC
Confidence 9953 455555 4455678889999998665
No 151
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.07 E-value=6.3e-06 Score=77.21 Aligned_cols=112 Identities=15% Similarity=0.238 Sum_probs=69.5
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
..+++|||.|.||..+|..|+ .-|.+|.+|+|++... +...+. +......+.. .......++++ ++.+|+|++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~-~~G~~V~~~~r~~~~~-~~l~~~-g~~~~~~~~~-~~~~~~~~~~~-~~~aDvVil~v 88 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLH-ENGEEVILWARRKEIV-DLINVS-HTSPYVEESK-ITVRATNDLEE-IKKEDILVIAI 88 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSHHHH-HHHHHH-SCBTTBTTCC-CCSEEESCGGG-CCTTEEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHH-hCCCeEEEEeCCHHHH-HHHHHh-CCcccCCCCe-eeEEEeCCHHH-hcCCCEEEEEC
Confidence 357999999999999999985 5689999999985432 221110 0000000000 01222357778 89999999999
Q ss_pred CCChhhhccccHHHHhcCC-CCcEEEEcCCCcccC-HHHHHHHHH
Q 020301 245 VLDKTTYHLINKERLATMK-KEAILVNCSRGPVID-EVALVEHLK 287 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk-~ga~lIN~aRG~~vd-e~aL~~aL~ 287 (328)
| +..++.++ ..++ ++.++|+++-|--.+ .+.+.+.+.
T Consensus 89 k-~~~~~~v~-----~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~ 127 (335)
T 1z82_A 89 P-VQYIREHL-----LRLPVKPSMVLNLSKGIEIKTGKRVSEIVE 127 (335)
T ss_dssp C-GGGHHHHH-----TTCSSCCSEEEECCCCCCTTTCCCHHHHHH
T ss_pred C-HHHHHHHH-----HHhCcCCCEEEEEeCCCCCCccCcHHHHHH
Confidence 9 45555544 3333 789999998763322 234444444
No 152
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.05 E-value=7e-06 Score=75.38 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=72.8
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCC-CCccccccCCHHHHhh---cCCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEVLR---EADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ell~---~aDiV~ 241 (328)
.+|+|||.|.||..+|..|+ ..|.+|.+||+++... +...+. +......+. ..... ...+.+++.+ .+|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~~~~~-~~~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLH-QGGNDVTLIDQWPAHI-EAIRKN-GLIADFNGEEVVANL-PIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHHH-CEEEEETTEEEEECC-CEECGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHH-hCCCcEEEEECCHHHH-HHHHhC-CEEEEeCCCeeEecc-eeecchhhcccCCCCCEEE
Confidence 47999999999999999984 6689999999976432 211110 000000000 00000 0113334444 899999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
+++| +..+..++ +.....+++++++|+++-|- -..+.+.+.+.+.++.
T Consensus 80 ~~v~-~~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 80 ALTK-AQQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp ECSC-HHHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred EEec-cccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 9999 34555555 44556688999999998653 2346666666554443
No 153
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.01 E-value=3.9e-06 Score=69.56 Aligned_cols=103 Identities=11% Similarity=0.163 Sum_probs=74.4
Q ss_pred CCEEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCc--hhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCC
Q 020301 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (328)
Q Consensus 165 g~tvgIiG~----G~IG~~vA~~l~~~fg~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (328)
-++++|||. |++|..+++.| ...|.+|+.+||.. .. -.+...+.+++|+....|
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L-~~~G~~v~~vnp~~~g~~-------------------i~G~~~~~sl~el~~~~D 72 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYL-LDQGYHVIPVSPKVAGKT-------------------LLGQQGYATLADVPEKVD 72 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHH-HHHTCCEEEECSSSTTSE-------------------ETTEECCSSTTTCSSCCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHH-HHCCCEEEEeCCcccccc-------------------cCCeeccCCHHHcCCCCC
Confidence 567999999 89999999997 56788888888865 21 012233467888888999
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEE
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ga 294 (328)
++++++| .+....++. +..+ ...++++++.+ .. ++++.+++++..+.-.
T Consensus 73 lvii~vp-~~~v~~v~~-~~~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 73 MVDVFRN-SEAAWGVAQ-EAIA-IGAKTLWLQLG--VI--NEQAAVLAREAGLSVV 121 (145)
T ss_dssp EEECCSC-STHHHHHHH-HHHH-HTCCEEECCTT--CC--CHHHHHHHHTTTCEEE
T ss_pred EEEEEeC-HHHHHHHHH-HHHH-cCCCEEEEcCC--hH--HHHHHHHHHHcCCEEE
Confidence 9999999 466677664 3444 56677777763 22 6778888887655533
No 154
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.99 E-value=2.9e-05 Score=74.10 Aligned_cols=113 Identities=15% Similarity=0.220 Sum_probs=81.2
Q ss_pred ccccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCC----chhH---HHHHHhhhhhhhhcCCCCCccccccCCHH
Q 020301 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY----QATR---LEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (328)
Q Consensus 160 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (328)
|..+.+.++.|+|.|..|..+|+.+ .+.|. +|+.+|++ .... +..+...|.+ +.. . .....+|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll-~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~---~~~--~--~~~~~~L~ 258 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFL-LDLGVKNVVAVDRKGILNENDPETCLNEYHLEIAR---ITN--P--ERLSGDLE 258 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHH-HHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHH---TSC--T--TCCCSCHH
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHH-HhCCCCeEEEEECCCcccCCCcccccCHHHHHHHH---hhh--c--cCchhhHH
Confidence 3468899999999999999999997 58899 89999997 3221 2222222321 111 1 12346899
Q ss_pred HHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHH
Q 020301 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEH 285 (328)
Q Consensus 232 ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~a 285 (328)
|.++.+|+++-+- +.++|.++.++.|+++++++.+|+-.. +..++.+++
T Consensus 259 eav~~ADVlIG~S-----ap~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~ 308 (388)
T 1vl6_A 259 TALEGADFFIGVS-----RGNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA 308 (388)
T ss_dssp HHHTTCSEEEECS-----CSSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT
T ss_pred HHHccCCEEEEeC-----CCCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh
Confidence 9999999997662 149999999999999999999998543 344444444
No 155
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.98 E-value=9.6e-06 Score=77.70 Aligned_cols=83 Identities=28% Similarity=0.440 Sum_probs=69.2
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCc---EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
...+|.|||. |+.|+..++.+ +++|+ .|..+|.+.... |. .++ .+.++|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a-~~lGa~~~~V~v~D~~~~~~---------------g~---------~~~-~i~~aDi 266 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLL-HKVGIPDANILKWDIKETSR---------------GG---------PFD-EIPQADI 266 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHH-HHTTCCGGGEEEECHHHHTT---------------CS---------CCT-HHHHSSE
T ss_pred CCCeEEEEcCCCHHHHHHHHHH-HhCCCCcCceEEeecccccc---------------CC---------chh-hHhhCCE
Confidence 4568999999 99999999995 89998 899999764210 11 123 4679999
Q ss_pred EEEcCCCChhhhccccHHHHhcC-CCCcEEEEcC
Q 020301 240 ISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~m-k~ga~lIN~a 272 (328)
|+.++......-.+|.++.++.| |||+++|++|
T Consensus 267 vIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 267 FINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp EEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred EEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 99999997778899999999999 9999999996
No 156
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.96 E-value=5.8e-05 Score=62.48 Aligned_cols=104 Identities=17% Similarity=0.190 Sum_probs=63.0
Q ss_pred cccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhh-cCCCCCccccccCC---HHHH-
Q 020301 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGEQPVTWKRASS---MDEV- 233 (328)
Q Consensus 159 ~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---l~el- 233 (328)
++....++++.|+|+|.+|+.+|+.| +..|.+|+++|+++... +. ++ ..+.... .....+ +.+.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L-~~~g~~V~vid~~~~~~-~~--------~~~~~g~~~~-~~d~~~~~~l~~~~ 81 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLA-SSSGHSVVVVDKNEYAF-HR--------LNSEFSGFTV-VGDAAEFETLKECG 81 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGG-GG--------SCTTCCSEEE-ESCTTSHHHHHTTT
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HH--------HHhcCCCcEE-EecCCCHHHHHHcC
Confidence 34567889999999999999999997 67899999999986432 11 11 1121111 001122 3333
Q ss_pred hhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 234 l~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
+..+|+|++++|.. ++.. .-....+.+.+...+|-..++.
T Consensus 82 ~~~ad~Vi~~~~~~-~~~~-~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 82 MEKADMVFAFTNDD-STNF-FISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp GGGCSEEEECSSCH-HHHH-HHHHHHHHTSCCSEEEEECSSG
T ss_pred cccCCEEEEEeCCc-HHHH-HHHHHHHHHCCCCeEEEEECCH
Confidence 67899999999943 3222 2233445555666676666655
No 157
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.94 E-value=2.4e-05 Score=75.54 Aligned_cols=99 Identities=20% Similarity=0.267 Sum_probs=70.7
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchh--HHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
-|.||||+|||||+-|.+=|..| +--|.+|++--|.... ....+ ..++++|. .+.+.+|+.++||+
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNL-RDSGv~V~Vglr~~s~~e~~~S~-----~~A~~~Gf------~v~~~~eA~~~ADv 101 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNM-RDSGLDISYALRKEAIAEKRASW-----RKATENGF------KVGTYEELIPQADL 101 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHH-HHTTCEEEEEECHHHHHTTCHHH-----HHHHHTTC------EEEEHHHHGGGCSE
T ss_pred HHcCCEEEEeCCChHhHHHHhHH-HhcCCcEEEEeCCCCcccccchH-----HHHHHCCC------EecCHHHHHHhCCE
Confidence 48999999999999999999997 6789998876542110 00000 11223332 23588999999999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
|.+.+|...+ ..++ ++....||+|+.|. .|.|-
T Consensus 102 V~~L~PD~~q-~~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 102 VINLTPDKQH-SDVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp EEECSCGGGH-HHHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred EEEeCChhhH-HHHH-HHHHhhCCCCCEEE-ecCcc
Confidence 9999995433 3445 56999999999887 67775
No 158
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.89 E-value=3.3e-06 Score=77.08 Aligned_cols=87 Identities=14% Similarity=0.208 Sum_probs=54.5
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEE-EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.+|||||+|.||+.+|+.|+ .. .+| .+||+++... ++..+.+ +. ...++++++++||+|++++
T Consensus 3 m~I~iIG~G~mG~~la~~l~-~~-~~v~~v~~~~~~~~-~~~~~~~-------g~------~~~~~~~~~~~~DvVilav 66 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLK-DR-YEIGYILSRSIDRA-RNLAEVY-------GG------KAATLEKHPELNGVVFVIV 66 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC------CCCEECSSHHHH-HHHHHHT-------CC------CCCSSCCCCC---CEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHH-Hc-CcEEEEEeCCHHHH-HHHHHHc-------CC------ccCCHHHHHhcCCEEEEeC
Confidence 36999999999999999874 44 788 4899986532 2211111 11 2346777888999999999
Q ss_pred CCChhhhccccHHHHhcC-CCCcEEEEcCCC
Q 020301 245 VLDKTTYHLINKERLATM-KKEAILVNCSRG 274 (328)
Q Consensus 245 plt~~t~~li~~~~~~~m-k~ga~lIN~aRG 274 (328)
|... . .+.+..+ +++.++||++-+
T Consensus 67 ~~~~-~-----~~v~~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 67 PDRY-I-----KTVANHLNLGDAVLVHCSGF 91 (276)
T ss_dssp CTTT-H-----HHHHTTTCCSSCCEEECCSS
T ss_pred ChHH-H-----HHHHHHhccCCCEEEECCCC
Confidence 9432 2 3444444 689999999854
No 159
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.89 E-value=4.5e-05 Score=69.63 Aligned_cols=107 Identities=16% Similarity=0.038 Sum_probs=74.4
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
|+++.|+|.|.+|+.++..| ...|.+|.+++|+..+. ++.. .+ +. .. .+++++ .++|+|+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L-~~~G~~v~V~nRt~~ka-~~la-~~-------~~---~~---~~~~~l-~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGAGGSAKALACEL-KKQGLQVSVLNRSSRGL-DFFQ-RL-------GC---DC---FMEPPK-SAFDLIINAT 180 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSCTTH-HHHH-HH-------TC---EE---ESSCCS-SCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHH-HC-------CC---eE---ecHHHh-ccCCEEEEcc
Confidence 88999999999999999997 57889999999997542 2211 11 11 11 123333 3899999999
Q ss_pred CCChhhhccccHHHHh-cCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 245 VLDKTTYHLINKERLA-TMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 245 plt~~t~~li~~~~~~-~mk~ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
|........++.+.+. .++++.+++++.-.+ .+.-|.+|-+.|.
T Consensus 181 p~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~ll~~A~~~G~ 225 (269)
T 3phh_A 181 SASLHNELPLNKEVLKGYFKEGKLAYDLAYGF--LTPFLSLAKELKT 225 (269)
T ss_dssp TTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS--CCHHHHHHHHTTC
T ss_pred cCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC--chHHHHHHHHCcC
Confidence 9764433346666433 577899999999876 6665555555553
No 160
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.88 E-value=6.2e-05 Score=70.34 Aligned_cols=132 Identities=12% Similarity=0.113 Sum_probs=88.3
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHH--HHH-hhhhhhhhcCCCC----Cc-----cccccCCHHH
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE--KFV-TAYGQFLKANGEQ----PV-----TWKRASSMDE 232 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~--~~~-~~~~~~~~~~~~~----~~-----~~~~~~~l~e 232 (328)
-.+|+|||.|.||+.+|..++ ..|++|+.||+++..... +.+ ..+.. ....+.. .. .....+++++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a-~~G~~V~l~D~~~~~l~~~~~~i~~~l~~-~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEMKS-LQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHH-HHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHH-HHHcCCCCCccCHHHHHhhcccccchHh
Confidence 468999999999999999975 779999999998753211 111 11111 1122211 00 1223568999
Q ss_pred HhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCC
Q 020301 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (328)
Q Consensus 233 ll~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~ 301 (328)
.++.||+|+=++|-+-+.+.-+-++.=+.++++++|-..+.+ +....|.++++. .=.-.++=.|.+
T Consensus 84 a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP 149 (319)
T 3ado_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNP 149 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSS
T ss_pred HhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCC
Confidence 999999999999988888777767777778999988655554 556777777654 333445444433
No 161
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.88 E-value=7.8e-05 Score=69.68 Aligned_cols=93 Identities=15% Similarity=0.222 Sum_probs=66.1
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
..++++|||.|.+|+.+++.+++.++ -+|.+|||++.. .+++.+.++. .+ .... +.++++++ ++|+|++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~-a~~la~~~~~----~~---~~~~-~~~~~e~v-~aDvVi~ 193 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKA-AKKFVSYCED----RG---ISAS-VQPAEEAS-RCDVLVT 193 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHH-HHHHHHHHHH----TT---CCEE-ECCHHHHT-SSSEEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHH-HHHHHHHHHh----cC---ceEE-ECCHHHHh-CCCEEEE
Confidence 45789999999999999998754344 579999998753 2333333321 11 1123 57899999 9999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
|.|.. ..++.. +.+++|..+++++
T Consensus 194 aTp~~---~pv~~~---~~l~~G~~V~~ig 217 (322)
T 1omo_A 194 TTPSR---KPVVKA---EWVEEGTHINAIG 217 (322)
T ss_dssp CCCCS---SCCBCG---GGCCTTCEEEECS
T ss_pred eeCCC---CceecH---HHcCCCeEEEECC
Confidence 99953 355543 4678999999995
No 162
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.87 E-value=6.8e-05 Score=60.05 Aligned_cols=95 Identities=12% Similarity=0.186 Sum_probs=57.6
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHH----hhcCCEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV----LREADVI 240 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el----l~~aDiV 240 (328)
+++++|+|+|.+|+.+|+.| ...|.+|.++|+++... +.....+ +.... .....+.+.+ +.++|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L-~~~g~~v~~~d~~~~~~-~~~~~~~-------~~~~~-~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSL-SEKGHDIVLIDIDKDIC-KKASAEI-------DALVI-NGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHC-------SSEEE-ESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HHHHHhc-------CcEEE-EcCCCCHHHHHHcCcccCCEE
Confidence 46899999999999999997 56799999999976432 2111111 11100 0011233222 6789999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~ 271 (328)
++++|....+ ..-....+.++++.+++-+
T Consensus 74 i~~~~~~~~~--~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 74 IAVTGKEEVN--LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp EECCSCHHHH--HHHHHHHHHTTCCCEEEEC
T ss_pred EEeeCCchHH--HHHHHHHHHcCCCEEEEEe
Confidence 9999853222 2223445567777666544
No 163
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.87 E-value=1.3e-05 Score=76.36 Aligned_cols=114 Identities=18% Similarity=0.105 Sum_probs=70.5
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
+=++++++|+|.|.||+.+|+.|+ .. .+|.++||+.+.. ++..+.+ +..........+++++++++|+|+
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~-~~-~~V~V~~R~~~~a-~~la~~~-------~~~~~d~~~~~~l~~ll~~~DvVI 82 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLK-DE-FDVYIGDVNNENL-EKVKEFA-------TPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHT-TT-SEEEEEESCHHHH-HHHTTTS-------EEEECCTTCHHHHHHHHTTCSCEE
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHH-cC-CeEEEEECCHHHH-HHHHhhC-------CeEEEecCCHHHHHHHHhCCCEEE
Confidence 557899999999999999999975 44 8999999987542 2211110 000000111246789999999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
+|+|.... .. + ....++.|..+++++-- .-+..+|.+..++..+
T Consensus 83 n~~P~~~~-~~-v---~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~ 126 (365)
T 2z2v_A 83 GALPGFLG-FK-S---IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQV 126 (365)
T ss_dssp ECCCHHHH-HH-H---HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTC
T ss_pred ECCChhhh-HH-H---HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCC
Confidence 99884322 11 2 23345678889998742 2344566666655443
No 164
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.86 E-value=1.8e-05 Score=72.89 Aligned_cols=117 Identities=14% Similarity=0.107 Sum_probs=69.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhcC-----C-cEEEEEcCCchhHHHHHHhhhhhhhhc-CCC-CCccccccCCHHHHhhcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGF-----K-MNLIYYDLYQATRLEKFVTAYGQFLKA-NGE-QPVTWKRASSMDEVLREA 237 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~f-----g-~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~ell~~a 237 (328)
.+|+|||.|.||..+|..|+ .- | .+|.+|+| . ...+...+..+..... .+. .........+ .+.+..+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~-~~~~~~~g~~~V~~~~r-~-~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 84 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLA-LRAAATDGLLEVSWIAR-G-AHLEAIRAAGGLRVVTPSRDFLARPTCVTDN-PAEVGTV 84 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HHHHHTTSSEEEEEECC-H-HHHHHHHHHTSEEEECSSCEEEECCSEEESC-HHHHCCE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCccccCCCCCEEEEEc-H-HHHHHHHhcCCeEEEeCCCCeEEecceEecC-ccccCCC
Confidence 47999999999999999985 44 7 89999998 3 2222221101111000 000 0000001123 3457899
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCH-HHHHHHHHcCC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE-VALVEHLKQNP 290 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde-~aL~~aL~~g~ 290 (328)
|+|++++|.. .+..++ +.....++++.++|.+.-| ++. +.|.+.+.+.+
T Consensus 85 D~vil~vk~~-~~~~v~-~~i~~~l~~~~~iv~~~nG--~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 85 DYILFCTKDY-DMERGV-AEIRPMIGQNTKILPLLNG--ADIAERMRTYLPDTV 134 (317)
T ss_dssp EEEEECCSSS-CHHHHH-HHHGGGEEEEEEEEECSCS--SSHHHHHTTTSCTTT
T ss_pred CEEEEecCcc-cHHHHH-HHHHhhcCCCCEEEEccCC--CCcHHHHHHHCCCCc
Confidence 9999999954 445444 3344556788999998776 343 55666664433
No 165
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=97.84 E-value=1.2e-05 Score=71.76 Aligned_cols=69 Identities=10% Similarity=0.149 Sum_probs=54.9
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
.+|||||+|.||.++|+.| +..|.+|.+||+. ++ ++.|| ++++|
T Consensus 7 mkI~IIG~G~~G~sLA~~L-~~~G~~V~~~~~~--------------------------------~~-~~~aD--ilavP 50 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKL-DSVGHYVTVLHAP--------------------------------ED-IRDFE--LVVID 50 (232)
T ss_dssp CEEEEECCSCCCSCHHHHH-HHTTCEEEECSSG--------------------------------GG-GGGCS--EEEEC
T ss_pred cEEEEEeeCHHHHHHHHHH-HHCCCEEEEecCH--------------------------------HH-hccCC--EEEEc
Confidence 5899999999999999998 5679999998762 12 57799 88888
Q ss_pred CChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 246 LDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 246 lt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.. ....++ ++....+++|+++++++
T Consensus 51 ~~-ai~~vl-~~l~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 51 AH-GVEGYV-EKLSAFARRGQMFLHTS 75 (232)
T ss_dssp SS-CHHHHH-HHHHTTCCTTCEEEECC
T ss_pred HH-HHHHHH-HHHHHhcCCCCEEEEEC
Confidence 54 556655 45666789999999985
No 166
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.81 E-value=3.7e-05 Score=62.67 Aligned_cols=95 Identities=14% Similarity=0.187 Sum_probs=60.5
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH---HHH-hhcCCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEV-LREADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~el-l~~aDiV~ 241 (328)
.++.|+|+|.+|+.+|+.| +..|.+|+++|+++... +. ++..+.... .....+. +++ +.++|+|+
T Consensus 8 ~~viIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~-~~--------~~~~g~~~i-~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKL-LASDIPLVVIETSRTRV-DE--------LRERGVRAV-LGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHH-HH--------HHHTTCEEE-ESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCEEEECcCHHHHHHHHHH-HHCCCCEEEEECCHHHH-HH--------HHHcCCCEE-ECCCCCHHHHHhcCcccCCEEE
Confidence 4699999999999999997 68899999999987542 11 111222111 0111222 222 57899999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
+++|...++..++ ..++.+.++..+|-.++
T Consensus 77 ~~~~~~~~n~~~~--~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 77 LTIPNGYEAGEIV--ASARAKNPDIEIIARAH 106 (140)
T ss_dssp ECCSCHHHHHHHH--HHHHHHCSSSEEEEEES
T ss_pred EECCChHHHHHHH--HHHHHHCCCCeEEEEEC
Confidence 9999655554433 34556666766665433
No 167
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.79 E-value=7.2e-05 Score=69.58 Aligned_cols=120 Identities=16% Similarity=0.130 Sum_probs=75.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc--CCCCCc-cccccCCHHHHhhcCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA--NGEQPV-TWKRASSMDEVLREADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~l~ell~~aDiV~l 242 (328)
.+|+|||.|.||..+|..|+ .-|.+|.+|+|+......+ .+-.... .+.... ......+++++.+.+|+|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~~~~i~~----~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLA-KTGHCVSVVSRSDYETVKA----KGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHH-HTTCEEEEECSTTHHHHHH----HCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEeCChHHHHHh----CCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 57999999999999999984 5689999999975321111 1100000 111000 01122467777678999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccE
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~g 293 (328)
++|.. ++...+ +..-..+++++++|.+.-| +-.++.|.+.+...++.+
T Consensus 78 avK~~-~~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl~ 125 (320)
T 3i83_A 78 CIKVV-EGADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVIS 125 (320)
T ss_dssp CCCCC-TTCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEEE
T ss_pred ecCCC-ChHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEEE
Confidence 99953 444443 3444567889999988776 333567777776555443
No 168
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.79 E-value=2.6e-05 Score=73.01 Aligned_cols=122 Identities=12% Similarity=0.124 Sum_probs=75.4
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCC-CCCccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG-EQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.++|+|||.|.||..+|..|+ ..|.+|.+|+|.. ..+.. .+.+......+ ..........++++ ++.+|+|+++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~-~~g~~V~~~~r~~--~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLA-LAGEAINVLARGA--TLQAL-QTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVA 77 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHH-HTTCCEEEECCHH--HHHHH-HHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCEEEEEEChH--HHHHH-HHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEe
Confidence 357999999999999999984 6689999999852 22221 11111000000 00011112246776 5899999999
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCCc------------------ccCHHHHHHHHHcCCccE
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP------------------VIDEVALVEHLKQNPMFR 293 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~------------------~vde~aL~~aL~~g~i~g 293 (328)
+|. .+++.++ +..-..+++++++|.+.-|= +=.++.|.+.+...++.+
T Consensus 78 vk~-~~~~~~~-~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~ 143 (335)
T 3ghy_A 78 VKA-PALESVA-AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLG 143 (335)
T ss_dssp CCH-HHHHHHH-GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEE
T ss_pred CCc-hhHHHHH-HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEE
Confidence 994 5555544 33344567899999998882 223456777775555443
No 169
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.70 E-value=0.00015 Score=66.89 Aligned_cols=108 Identities=20% Similarity=0.288 Sum_probs=66.6
Q ss_pred CCEEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 165 GQTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 165 g~tvgIiG~G~IG~~-vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
-.++||||+|.||+. .++.+.+.-++++. ++|+++.. .++..+.| +. ..+.++++++++.|+|++
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~a~~~-------~~-----~~~~~~~~ll~~~D~V~i 72 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVK-REKICSDY-------RI-----MPFDSIESLAKKCDCIFL 72 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHH-HHHHHHHH-------TC-----CBCSCHHHHHTTCSEEEE
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHHHHHc-------CC-----CCcCCHHHHHhcCCEEEE
Confidence 358999999999996 88876433578877 68988653 22222222 21 125799999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCc-EEEE-cCCCcccCHHHHHHHHHcCC
Q 020301 243 HPVLDKTTYHLINKERLATMKKEA-ILVN-CSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga-~lIN-~aRG~~vde~aL~~aL~~g~ 290 (328)
++|.. +..-+-...+ +.|. +++. ..--.+-+.+.|.++.++..
T Consensus 73 ~tp~~--~h~~~~~~al---~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g 117 (308)
T 3uuw_A 73 HSSTE--THYEIIKILL---NLGVHVYVDKPLASTVSQGEELIELSTKKN 117 (308)
T ss_dssp CCCGG--GHHHHHHHHH---HTTCEEEECSSSSSSHHHHHHHHHHHHHHT
T ss_pred eCCcH--hHHHHHHHHH---HCCCcEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 99933 2221222333 3343 4443 22233345566777766643
No 170
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.68 E-value=0.00015 Score=58.22 Aligned_cols=100 Identities=12% Similarity=0.168 Sum_probs=59.7
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH---HHH-hhcCC
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEV-LREAD 238 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~el-l~~aD 238 (328)
+.++++.|+|+|.+|+.+++.| ...|.+|+++|++.... +. +...+.... .....+. +++ +.++|
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l-~~~g~~v~~~d~~~~~~-~~--------~~~~~~~~~-~~d~~~~~~l~~~~~~~~d 72 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKEL-HRMGHEVLAVDINEEKV-NA--------YASYATHAV-IANATEENELLSLGIRNFE 72 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHH-HHTTCCCEEEESCHHHH-HT--------TTTTCSEEE-ECCTTCHHHHHTTTGGGCS
T ss_pred CcCCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH--------HHHhCCEEE-EeCCCCHHHHHhcCCCCCC
Confidence 5678899999999999999997 57899999999875431 11 111121101 0111233 333 67899
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
+|++++|...++. +.-....+.+.+. .+|-.+.+.
T Consensus 73 ~vi~~~~~~~~~~-~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 73 YVIVAIGANIQAS-TLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp EEEECCCSCHHHH-HHHHHHHHHTTCS-EEEEECCSH
T ss_pred EEEECCCCchHHH-HHHHHHHHHcCCC-eEEEEeCCH
Confidence 9999998642322 2223444556666 555555443
No 171
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.67 E-value=8.2e-05 Score=68.31 Aligned_cols=114 Identities=18% Similarity=0.144 Sum_probs=74.6
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
.++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|+... .++..+.+.. .+ .. ...+++++.+++|+
T Consensus 122 ~~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~-a~~la~~~~~----~~--~~---~~~~~~~l~~~aDi 190 (281)
T 3o8q_A 122 VLLKGATILLIGAGGAARGVLKPL-LDQQPASITVTNRTFAK-AEQLAELVAA----YG--EV---KAQAFEQLKQSYDV 190 (281)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HTTCCSEEEEEESSHHH-HHHHHHHHGG----GS--CE---EEEEGGGCCSCEEE
T ss_pred CCccCCEEEEECchHHHHHHHHHH-HhcCCCeEEEEECCHHH-HHHHHHHhhc----cC--Ce---eEeeHHHhcCCCCE
Confidence 357899999999999999999997 57896 99999998753 2222222211 01 01 12245565588999
Q ss_pred EEEcCCCChhhh-ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 240 ISLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 240 V~l~~plt~~t~-~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
|+.+.|...... -.+.. +.++++++++++.-.+ ..+.-|.+|-+.|
T Consensus 191 IInaTp~gm~~~~~~l~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 237 (281)
T 3o8q_A 191 IINSTSASLDGELPAIDP---VIFSSRSVCYDMMYGK-GYTVFNQWARQHG 237 (281)
T ss_dssp EEECSCCCC----CSCCG---GGEEEEEEEEESCCCS-SCCHHHHHHHHTT
T ss_pred EEEcCcCCCCCCCCCCCH---HHhCcCCEEEEecCCC-ccCHHHHHHHHCC
Confidence 999999764322 13443 3467899999997654 4455444454445
No 172
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.65 E-value=0.00011 Score=68.35 Aligned_cols=117 Identities=18% Similarity=0.263 Sum_probs=69.8
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCC-CCCccccccCCHHHHhhcCCEEE
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG-EQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
...++|+|||.|.||..+|..|+ .-|.+|..| ++... .+...+ .+......+ ..........++++ ++.+|+|+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~-~~G~~V~l~-~~~~~-~~~i~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vi 91 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLA-RAGHEVILI-ARPQH-VQAIEA-TGLRLETQSFDEQVKVSASSDPSA-VQGADLVL 91 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHH-HTTCEEEEE-CCHHH-HHHHHH-HCEEEECSSCEEEECCEEESCGGG-GTTCSEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHH-HCCCeEEEE-EcHhH-HHHHHh-CCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEE
Confidence 45678999999999999999984 668999999 65432 222111 110000000 00111111245555 58999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLK 287 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~ 287 (328)
+++|.. +++.++ +..-..+++++++|.+.-|= -.++.|.+.+.
T Consensus 92 lavk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~~ 134 (318)
T 3hwr_A 92 FCVKST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLLE 134 (318)
T ss_dssp ECCCGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHCC
T ss_pred EEcccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHcC
Confidence 999953 555544 34445678899999987772 22355666653
No 173
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.64 E-value=0.00038 Score=63.24 Aligned_cols=113 Identities=15% Similarity=0.106 Sum_probs=71.5
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh-hcCCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV 240 (328)
++.|+++.|+|.|.+|+.+|+.| ...|.+|++++|+... .++..+.++. .+ .. ...+++++. .++|+|
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L-~~~G~~V~v~~R~~~~-~~~la~~~~~----~~--~~---~~~~~~~~~~~~~Div 184 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPL-LSLDCAVTITNRTVSR-AEELAKLFAH----TG--SI---QALSMDELEGHEFDLI 184 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHH-HHHHHHHTGG----GS--SE---EECCSGGGTTCCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHcCCEEEEEECCHHH-HHHHHHHhhc----cC--Ce---eEecHHHhccCCCCEE
Confidence 46789999999999999999997 5788999999998643 2222222211 01 00 112334443 589999
Q ss_pred EEcCCCChhhh-ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 241 SLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 241 ~l~~plt~~t~-~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
+.+.|...... .-+..+ .++++.+++|+.-.+ ....-+..|-+.|
T Consensus 185 Vn~t~~~~~~~~~~i~~~---~l~~~~~v~D~~y~p-~~t~~~~~a~~~G 230 (271)
T 1nyt_A 185 INATSSGISGDIPAIPSS---LIHPGIYCYDMFYQK-GKTPFLAWCEQRG 230 (271)
T ss_dssp EECCSCGGGTCCCCCCGG---GCCTTCEEEESCCCS-SCCHHHHHHHHTT
T ss_pred EECCCCCCCCCCCCCCHH---HcCCCCEEEEeccCC-cCCHHHHHHHHcC
Confidence 99999654311 013333 357899999998764 3334444444444
No 174
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.63 E-value=0.00019 Score=66.50 Aligned_cols=119 Identities=13% Similarity=0.180 Sum_probs=74.3
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc-CCCCCc-cccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPV-TWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~ell~~aDiV~l~ 243 (328)
++++|||.|.||..+|..|+ .-|.+|.+|+|+.. +. ....+..... .+.... ......+.++ +..+|+|+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~~---~~-i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQ-RSGEDVHFLLRRDY---EA-IAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHH-HTSCCEEEECSTTH---HH-HHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEEcCcH---HH-HHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEe
Confidence 47999999999999999984 56899999999752 21 1111111110 011000 0111245555 6899999999
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCCcccC-HHHHHHHHHcCCccEE
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVID-EVALVEHLKQNPMFRV 294 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vd-e~aL~~aL~~g~i~ga 294 (328)
+|. .+++..+ +..-..+++++++|.+.-| ++ ++.|.+.+.+.++.++
T Consensus 77 vk~-~~~~~~l-~~l~~~l~~~~~iv~l~nG--i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 77 LKT-FANSRYE-ELIRPLVEEGTQILTLQNG--LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp CCG-GGGGGHH-HHHGGGCCTTCEEEECCSS--SSHHHHHHHHTCGGGEEEE
T ss_pred cCC-CCcHHHH-HHHHhhcCCCCEEEEecCC--CCcHHHHHHHCCCCcEEEE
Confidence 994 3444433 3444567889999998877 43 5677777765555544
No 175
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.63 E-value=0.00012 Score=66.72 Aligned_cols=115 Identities=15% Similarity=0.107 Sum_probs=72.2
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-cCCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (328)
++.|+++.|+|.|.+|+.+|..| ...|.+|.+++|+..+ .++..+.++. .+ .. ...+++++.+ ++|+|
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L-~~~G~~v~v~~R~~~~-a~~l~~~~~~----~~--~~---~~~~~~~~~~~~~Div 184 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPL-LQAQQNIVLANRTFSK-TKELAERFQP----YG--NI---QAVSMDSIPLQTYDLV 184 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHH-HHTTCEEEEEESSHHH-HHHHHHHHGG----GS--CE---EEEEGGGCCCSCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCEEEEEECCHHH-HHHHHHHccc----cC--Ce---EEeeHHHhccCCCCEE
Confidence 57789999999999999999997 4778999999998643 2222222211 00 01 1123444433 89999
Q ss_pred EEcCCCChhhhc-cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 241 SLHPVLDKTTYH-LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 241 ~l~~plt~~t~~-li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
+.+.|......- -+..+.+ +++.+++++.-.+..+..-+.+|-+.|.
T Consensus 185 In~t~~~~~~~~~~i~~~~l---~~~~~v~D~~y~p~~~t~ll~~a~~~G~ 232 (272)
T 1p77_A 185 INATSAGLSGGTASVDAEIL---KLGSAFYDMQYAKGTDTPFIALCKSLGL 232 (272)
T ss_dssp EECCCC-------CCCHHHH---HHCSCEEESCCCTTSCCHHHHHHHHTTC
T ss_pred EECCCCCCCCCCCCCCHHHc---CCCCEEEEeeCCCCcCCHHHHHHHHcCC
Confidence 999996543210 1344433 5788999998866554565555555553
No 176
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.61 E-value=0.00016 Score=69.20 Aligned_cols=103 Identities=14% Similarity=0.058 Sum_probs=62.0
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEc---CCchhHHHHHHhhhhhhhh--cC-C--CC-Ccccc-ccCCHHHHhh
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD---LYQATRLEKFVTAYGQFLK--AN-G--EQ-PVTWK-RASSMDEVLR 235 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d---~~~~~~~~~~~~~~~~~~~--~~-~--~~-~~~~~-~~~~l~ell~ 235 (328)
.+|+|||.|.||..+|..|++.-|.+|.+|+ ++... .+......+.... .. + .. ..... ...++++.++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAER-WTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHH-HHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHH-HHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 3799999999999999997422489999999 54321 1111110000000 00 1 00 00011 2357888899
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEc
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~ 271 (328)
.||+|++++|. ..++.++ ++.-..+++++++|..
T Consensus 82 ~aD~Vilav~~-~~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 82 GADVVILTVPA-FAHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp TCSEEEECSCG-GGHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCCEEEEeCch-HHHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999994 3444433 3344557789999985
No 177
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.58 E-value=7.7e-05 Score=57.88 Aligned_cols=94 Identities=17% Similarity=0.135 Sum_probs=58.4
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcc--ccccCCHHHHhhcCCEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT--WKRASSMDEVLREADVI 240 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ell~~aDiV 240 (328)
.+++++|+|.|.||+.+++.| ...| .+|+++|+++... +.. ...+..... .....+++++++++|+|
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l-~~~g~~~v~~~~r~~~~~-~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALL-KTSSNYSVTVADHDLAAL-AVL--------NRMGVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHH-HHCSSEEEEEEESCHHHH-HHH--------HTTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CcCeEEEECCCHHHHHHHHHH-HhCCCceEEEEeCCHHHH-HHH--------HhCCCcEEEecCCCHHHHHHHHcCCCEE
Confidence 467899999999999999997 5778 8999999986532 111 111111110 11113466788899999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
+.+.|... +..++ +.. .+.|...++.+
T Consensus 74 i~~~~~~~-~~~~~-~~~---~~~g~~~~~~~ 100 (118)
T 3ic5_A 74 ISAAPFFL-TPIIA-KAA---KAAGAHYFDLT 100 (118)
T ss_dssp EECSCGGG-HHHHH-HHH---HHTTCEEECCC
T ss_pred EECCCchh-hHHHH-HHH---HHhCCCEEEec
Confidence 99998322 22211 111 24566677764
No 178
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.57 E-value=0.00099 Score=61.09 Aligned_cols=120 Identities=18% Similarity=0.190 Sum_probs=77.8
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|+.... ++..+.+.... ...........++++.++++|+|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L-~~~G~~~v~i~~R~~~~a-~~la~~~~~~~---~~~~i~~~~~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYAL-VTHGVQKLQVADLDTSRA-QALADVINNAV---GREAVVGVDARGIEDVIAAADGV 198 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSSHHHH-HHHHHHHHHHH---TSCCEEEECSTTHHHHHHHSSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEECCHHHH-HHHHHHHHhhc---CCceEEEcCHHHHHHHHhcCCEE
Confidence 57899999999999999999997 57898 799999987532 22222221100 00011111234788999999999
Q ss_pred EEcCCCChhhh--ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 241 SLHPVLDKTTY--HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 241 ~l~~plt~~t~--~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
+.+.|..-... -.+. .+.++++.+++++.=.+ ..+.-|.+|-+.|.
T Consensus 199 InaTp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P-~~T~ll~~A~~~G~ 246 (283)
T 3jyo_A 199 VNATPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMP-IETELLKAARALGC 246 (283)
T ss_dssp EECSSTTSTTSCSCSSC---GGGCCTTCEEEECCCSS-SSCHHHHHHHHHTC
T ss_pred EECCCCCCCCCCCCCCC---HHHhCCCCEEEEecCCC-CCCHHHHHHHHCcC
Confidence 99999643211 1233 34567889999986544 34555556666563
No 179
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.56 E-value=0.00014 Score=58.94 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=55.7
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHH----hhcCCE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV----LREADV 239 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el----l~~aDi 239 (328)
.++++.|+|+|.+|+.+|+.| ...|.+|+++|+++... +.. ...+.... .....+.+.+ +.++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L-~~~g~~V~~id~~~~~~-~~~--------~~~~~~~~-~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVREL-TAAGKKVLAVDKSKEKI-ELL--------EDEGFDAV-IADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHH-HHH--------HHTTCEEE-ECCTTCHHHHHHSCCTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHH-HHH--------HHCCCcEE-ECCCCCHHHHHhCCcccCCE
Confidence 457899999999999999997 57899999999986532 111 11121111 0112232222 468999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEE
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILV 269 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lI 269 (328)
|+++.| +.+ .++.-....+.+....+++
T Consensus 74 vi~~~~-~~~-~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 74 VLITGS-DDE-FNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp EEECCS-CHH-HHHHHHHHHHHHCCCCEEE
T ss_pred EEEecC-CHH-HHHHHHHHHHHhCCceEEE
Confidence 999999 333 3333344445555333443
No 180
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.54 E-value=0.00013 Score=69.73 Aligned_cols=112 Identities=13% Similarity=0.175 Sum_probs=78.7
Q ss_pred ccccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc-----h-hHHHHHHhhhhhhhhcCCCCCccccccCCHHH
Q 020301 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-----A-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDE 232 (328)
Q Consensus 160 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 232 (328)
|..+...+|.|+|.|..|..+|+.+ .++|. +|+.+|+.- . ..+..+...|... .. ......+|+|
T Consensus 183 g~~l~d~kVVi~GAGaAG~~iA~ll-~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~---~~----~~~~~~~L~e 254 (398)
T 2a9f_A 183 KKSLDEVSIVVNGGGSAGLSITRKL-LAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKV---TN----REFKSGTLED 254 (398)
T ss_dssp TCCTTSCEEEEECCSHHHHHHHHHH-HHHTCCEEEEEETTEECCTTCCCSCCC---CHHHH---HS----CTTCCCSCSH
T ss_pred CCCCCccEEEEECCCHHHHHHHHHH-HHcCCCeEEEEECCCcccCCccccchHHHHHHhhc---cC----cccchhhHHH
Confidence 4578889999999999999999997 68899 999999873 0 1111111222111 00 0112357999
Q ss_pred HhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH
Q 020301 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE 284 (328)
Q Consensus 233 ll~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~ 284 (328)
.++.+|+++=. .+.+++.++.++.|+++++++..|+-.. +..++.++
T Consensus 255 av~~ADV~IG~-----Sapgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~ 302 (398)
T 2a9f_A 255 ALEGADIFIGV-----SAPGVLKAEWISKMAARPVIFAMANPIPEIYPDEALE 302 (398)
T ss_dssp HHHTTCSEEEC-----CSTTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHT
T ss_pred HhccCCEEEec-----CCCCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHH
Confidence 99999998655 2369999999999999999999998653 33333333
No 181
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.52 E-value=0.00019 Score=59.06 Aligned_cols=102 Identities=8% Similarity=0.009 Sum_probs=60.6
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccc--cccCCHHHH-hhcCCEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW--KRASSMDEV-LREADVIS 241 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~el-l~~aDiV~ 241 (328)
.+++.|+|+|.+|+.+++.| ...|.+|.+.|+++....+.....+ ..+...... .....++++ +.++|.|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L-~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQL-NQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHH-HHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 46799999999999999997 5789999999997432211111100 111111100 011234454 78999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
++++..+ .++.-....+.+.+...+|...+.
T Consensus 77 ~~~~~d~--~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 77 ALSDNDA--DNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp ECSSCHH--HHHHHHHHHHHHTSSSCEEEECSS
T ss_pred EecCChH--HHHHHHHHHHHHCCCCEEEEEECC
Confidence 9998433 333334555566555555554444
No 182
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.52 E-value=0.00053 Score=62.54 Aligned_cols=113 Identities=13% Similarity=0.036 Sum_probs=73.6
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh-hcCC
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READ 238 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aD 238 (328)
.++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|+..+ .++..+.+. . + .. ...+++++- .++|
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L-~~~G~~~v~i~~R~~~~-a~~la~~~~----~-~--~~---~~~~~~~l~~~~~D 183 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPF-LQAGPSELVIANRDMAK-ALALRNELD----H-S--RL---RISRYEALEGQSFD 183 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTCCSEEEEECSCHHH-HHHHHHHHC----C-T--TE---EEECSGGGTTCCCS
T ss_pred CCccCCEEEEECccHHHHHHHHHH-HHcCCCEEEEEeCCHHH-HHHHHHHhc----c-C--Ce---eEeeHHHhcccCCC
Confidence 358899999999999999999997 57896 99999998753 233222221 0 0 11 112334433 7899
Q ss_pred EEEEcCCCChhhh-ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 239 VISLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 239 iV~l~~plt~~t~-~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
+|+.+.|..-... -.+.. +.++++.+++++.=.+ ..+.-|.+|-+.|
T Consensus 184 ivInaTp~gm~~~~~~i~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 231 (272)
T 3pwz_A 184 IVVNATSASLTADLPPLPA---DVLGEAALAYELAYGK-GLTPFLRLAREQG 231 (272)
T ss_dssp EEEECSSGGGGTCCCCCCG---GGGTTCSEEEESSCSC-CSCHHHHHHHHHS
T ss_pred EEEECCCCCCCCCCCCCCH---HHhCcCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 9999999643221 12443 3467899999997654 3455555555555
No 183
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.49 E-value=0.0012 Score=61.42 Aligned_cols=122 Identities=12% Similarity=0.096 Sum_probs=75.6
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc--hhHHHHHHhhhhhhhhcCCCCCccccccCC---HHHHh
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVL 234 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell 234 (328)
.++.||++.|+|.|.+|+.+|..| ...|+ +|.+++|+. ..+.++..+.+.. ..+ .........+ +.+.+
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L-~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~---~~~-~~~~~~~~~~~~~l~~~l 224 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQA-ALDGVKEISIFNRKDDFYANAEKTVEKINS---KTD-CKAQLFDIEDHEQLRKEI 224 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTTHHHHHHHHHHHHH---HSS-CEEEEEETTCHHHHHHHH
T ss_pred CCccCCEEEEECCChHHHHHHHHH-HHCCCCEEEEEECCCchHHHHHHHHHHhhh---hcC-CceEEeccchHHHHHhhh
Confidence 368899999999999999999997 57898 899999983 1222332222211 011 0111112223 55678
Q ss_pred hcCCEEEEcCCCChhh---hccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 235 READVISLHPVLDKTT---YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 235 ~~aDiV~l~~plt~~t---~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
.++|+|+.+.|..-.. ...+. ....++++.+++++.=.+ ..+.-|.+|-+.|.
T Consensus 225 ~~aDiIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G~ 280 (315)
T 3tnl_A 225 AESVIFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP-TKTRLLEIAEEQGC 280 (315)
T ss_dssp HTCSEEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS-SSCHHHHHHHHTTC
T ss_pred cCCCEEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC-CCCHHHHHHHHCCC
Confidence 8999999999954221 11121 234467899999986544 34555555555553
No 184
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.48 E-value=0.00046 Score=63.57 Aligned_cols=167 Identities=19% Similarity=0.176 Sum_probs=103.8
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCccEEEecCC--CCccHH-HHHHhhccCCceEEEccccCCccChh
Q 020301 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (328)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~d~li~~~~--~~~~~~-~l~~~~~l~~k~i~~~g~G~d~id~~ 103 (328)
.-++.|.+.+.+..++ ..+++|+.+.+. +..++++++.+ ..++++ +++...-. | -+|.+-..
T Consensus 77 ~c~~vGi~s~~~~lp~-~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~--K-------DVDG~hp~ 146 (303)
T 4b4u_A 77 ACRRVGMDSLKIELPQ-ETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLA--K-------DVDGVTCL 146 (303)
T ss_dssp HHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGG--G-------CTTCCCHH
T ss_pred HHHHcCCeEEEEecCc-cCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcc--c-------ccCccCcc
Confidence 3456788776655433 357888876653 25789999853 345554 44443221 1 22222111
Q ss_pred HHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCH-HHHHHHH
Q 020301 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYAR 182 (328)
Q Consensus 104 ~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~-IG~~vA~ 182 (328)
.. |-...+.++. ...++.- +..+| ++ .+.++.||++.|||-+. +|+.+|.
T Consensus 147 N~---G~L~~g~~~~-~PcTp~g-v~~lL---~~---------------------~~i~l~Gk~vvViGRS~iVGkPla~ 197 (303)
T 4b4u_A 147 GF---GRMAMGEAAY-GSATPAG-IMTIL---KE---------------------NNIEIAGKHAVVVGRSAILGKPMAM 197 (303)
T ss_dssp HH---HHHHTTCCCC-CCHHHHH-HHHHH---HH---------------------TTCCCTTCEEEEECCCTTTHHHHHH
T ss_pred hH---HHhcCCCCcc-cCccHHH-HHHHH---HH---------------------HCCCCCCCEEEEEeccccccchHHH
Confidence 11 1112233332 2333322 22222 11 23579999999999887 4999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcC
Q 020301 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATM 262 (328)
Q Consensus 183 ~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~m 262 (328)
+| ..-|+.|..+.... .+|.+..++||+|+.++.- .++|..+. .
T Consensus 198 LL-~~~~ATVTi~Hs~T----------------------------~dl~~~~~~ADIvV~A~G~----p~~i~~d~---v 241 (303)
T 4b4u_A 198 ML-LQANATVTICHSRT----------------------------QNLPELVKQADIIVGAVGK----AELIQKDW---I 241 (303)
T ss_dssp HH-HHTTCEEEEECTTC----------------------------SSHHHHHHTCSEEEECSCS----TTCBCGGG---S
T ss_pred HH-HhcCCEEEEecCCC----------------------------CCHHHHhhcCCeEEeccCC----CCcccccc---c
Confidence 97 57799999875421 4789999999999999763 45777765 5
Q ss_pred CCCcEEEEcCC
Q 020301 263 KKEAILVNCSR 273 (328)
Q Consensus 263 k~ga~lIN~aR 273 (328)
|+|+++||++-
T Consensus 242 k~GavVIDVGi 252 (303)
T 4b4u_A 242 KQGAVVVDAGF 252 (303)
T ss_dssp CTTCEEEECCC
T ss_pred cCCCEEEEece
Confidence 89999999974
No 185
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.46 E-value=0.00042 Score=64.26 Aligned_cols=123 Identities=16% Similarity=0.203 Sum_probs=68.9
Q ss_pred EEEEEecCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
+|+|||.|.+|..+|..|++. +|.+|..||+..... +.....+........ .........++++ ++.||+|++++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~-~~~~~~l~~~~~~~~-~~~~i~~t~d~~~-l~~aDvViiav~ 78 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIP-QGKALDMYESGPVGL-FDTKVTGSNDYAD-TANSDIVIITAG 78 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHH-HHHHHhHHhhhhccc-CCcEEEECCCHHH-HCCCCEEEEeCC
Confidence 799999999999999987643 689999999986432 221100000000000 1111222256777 899999999998
Q ss_pred CChhhhcc-------cc----HH---HHhcCCCCcEEEEcCCCcccCHH--HHHHH--HHcCCccEEE
Q 020301 246 LDKTTYHL-------IN----KE---RLATMKKEAILVNCSRGPVIDEV--ALVEH--LKQNPMFRVG 295 (328)
Q Consensus 246 lt~~t~~l-------i~----~~---~~~~mk~ga~lIN~aRG~~vde~--aL~~a--L~~g~i~gaa 295 (328)
. +...+. .| ++ .+....|++++|+++- .+|.- .+.+. +...++.|.+
T Consensus 79 ~-p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN--P~~~~~~~~~~~~~~~~~rviG~g 143 (310)
T 1guz_A 79 L-PRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN--PLDIMTHVAWVRSGLPKERVIGMA 143 (310)
T ss_dssp C-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS--SHHHHHHHHHHHHCSCGGGEEEEC
T ss_pred C-CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC--chHHHHHHHHHhcCCChHHEEECC
Confidence 4 332222 11 11 2222357889999844 34432 22222 3334566653
No 186
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.43 E-value=0.00064 Score=63.01 Aligned_cols=68 Identities=18% Similarity=0.304 Sum_probs=47.8
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh-hcCCEEEEcC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~~ 244 (328)
++||||+|.||+.+++.+.+.-++++. ++|+++... +++.+.| +. ...+.++++++ .++|+|++++
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~-~~~~~~~-------~~----~~~~~~~~~~l~~~~D~V~i~t 70 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETA-ATFASRY-------QN----IQLFDQLEVFFKSSFDLVYIAS 70 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHH-HHHGGGS-------SS----CEEESCHHHHHTSSCSEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHc-------CC----CeEeCCHHHHhCCCCCEEEEeC
Confidence 699999999999999987433367765 788876432 2221111 21 12357899999 7899999999
Q ss_pred CC
Q 020301 245 VL 246 (328)
Q Consensus 245 pl 246 (328)
|.
T Consensus 71 p~ 72 (325)
T 2ho3_A 71 PN 72 (325)
T ss_dssp CG
T ss_pred Ch
Confidence 93
No 187
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.42 E-value=0.00058 Score=63.12 Aligned_cols=109 Identities=15% Similarity=0.184 Sum_probs=67.2
Q ss_pred CEEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~-vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.++||||+|.||+. +++.+.+.-++++. ++|+++... ++..+.| +. ..+.+++++...+|+|+++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~~~~~-------g~-----~~~~~~~~l~~~~D~V~i~ 72 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKA-LPICESW-------RI-----PYADSLSSLAASCDAVFVH 72 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTH-HHHHHHH-------TC-----CBCSSHHHHHTTCSEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHc-------CC-----CccCcHHHhhcCCCEEEEe
Confidence 47999999999997 88876433478876 889886542 2222222 21 1346778776789999999
Q ss_pred CCCChhhhccccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcc
Q 020301 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga-~lIN~-aRG~~vde~aL~~aL~~g~i~ 292 (328)
+|..... +-....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 73 tp~~~h~-----~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 73 SSTASHF-----DVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp SCTTHHH-----HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred CCchhHH-----HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 9943221 22223344565 55542 222334556788887775544
No 188
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.40 E-value=0.00048 Score=56.42 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=69.6
Q ss_pred CCCEEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 164 KGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 164 ~g~tvgIiG~----G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
+-++++|||. |++|..+++.| +..|++|+..+|..... .-.+...+.+++|+-...|+
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l-~~~G~~v~~vnp~~~~~-----------------~i~G~~~~~sl~el~~~vDl 73 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYL-REQGYRVLPVNPRFQGE-----------------ELFGEEAVASLLDLKEPVDI 73 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHH-HHTTCEEEEECGGGTTS-----------------EETTEECBSSGGGCCSCCSE
T ss_pred CCCEEEEECCCCCCCChHHHHHHHH-HHCCCEEEEeCCCcccC-----------------cCCCEEecCCHHHCCCCCCE
Confidence 3568999999 89999999997 67888876666542010 00122335688998889999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
+++++|. +....++. +..+. ..++++++.+- . ++.+.+..++..+.
T Consensus 74 avi~vp~-~~~~~v~~-~~~~~-gi~~i~~~~g~---~-~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 74 LDVFRPP-SALMDHLP-EVLAL-RPGLVWLQSGI---R-HPEFEKALKEAGIP 119 (140)
T ss_dssp EEECSCH-HHHTTTHH-HHHHH-CCSCEEECTTC---C-CHHHHHHHHHTTCC
T ss_pred EEEEeCH-HHHHHHHH-HHHHc-CCCEEEEcCCc---C-HHHHHHHHHHcCCE
Confidence 9999995 56666663 44443 33456665432 2 57777777776554
No 189
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.39 E-value=0.00033 Score=68.12 Aligned_cols=117 Identities=19% Similarity=0.188 Sum_probs=80.1
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc---EEEEEc----CC--chh--H---HHHHHhhhhhhhhcCCCCCccccc
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYD----LY--QAT--R---LEKFVTAYGQFLKANGEQPVTWKR 226 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~---~V~~~d----~~--~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~ 226 (328)
..+.++++.|+|.|..|+.+++.| ...|+ +|+++| |+ ... . ...+...|. .... . ...
T Consensus 182 ~~l~~~rvlvlGAGgAg~aia~~L-~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a---~~~~---~-~~~ 253 (439)
T 2dvm_A 182 KKISEITLALFGAGAAGFATLRIL-TEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLL---KKTN---G-ENI 253 (439)
T ss_dssp CCTTTCCEEEECCSHHHHHHHHHH-HHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHH---TTSC---T-TCC
T ss_pred CCccCCEEEEECccHHHHHHHHHH-HHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHh---hccc---c-ccc
Confidence 467899999999999999999997 57898 799999 76 211 1 111101110 0000 0 001
Q ss_pred cCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 227 ASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 227 ~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
..++.+.++++|+|+.+.|..+ +++.++.++.|+++.++++.+.. ..|.-+.+|.+.|.
T Consensus 254 ~~~L~e~l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP--~~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 254 EGGPQEALKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANP--VPEILPEEAKKAGA 312 (439)
T ss_dssp CSSHHHHHTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSS--SCSSCHHHHHHHTC
T ss_pred cccHHHHhccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCC--CCcchHHHHHHcCC
Confidence 3578999999999999988422 56667788999999999999543 35555666666664
No 190
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.39 E-value=0.00025 Score=65.52 Aligned_cols=105 Identities=18% Similarity=0.161 Sum_probs=63.6
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (328)
.++||||+|.||+..++.+.+.-+.++. ++|+++... ++ + .. . ...+.+++++++ ++|+|++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~-~~----~----~~---~---~~~~~~~~~~l~~~~~D~V~i 75 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNL-AL----V----PP---G---CVIESDWRSVVSAPEVEAVII 75 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHH-TT----C----CT---T---CEEESSTHHHHTCTTCCEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HH----H----Hh---h---CcccCCHHHHhhCCCCCEEEE
Confidence 4799999999999999987433367754 889876431 10 0 00 0 123568999996 7999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCC
Q 020301 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga-~lIN~-aRG~~vde~aL~~aL~~g~ 290 (328)
++|. .... +-....++.|. +++.- .--.+-+.+.|.++.++..
T Consensus 76 ~tp~--~~h~---~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g 120 (315)
T 3c1a_A 76 ATPP--ATHA---EITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATG 120 (315)
T ss_dssp ESCG--GGHH---HHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHC
T ss_pred eCCh--HHHH---HHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcC
Confidence 9993 3222 22223345564 55552 1122334456777666543
No 191
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.37 E-value=0.00088 Score=62.23 Aligned_cols=68 Identities=26% Similarity=0.472 Sum_probs=49.8
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (328)
.++||||+|.||+..++.+.+.-++++. ++|+++... ++..+.| + .. +.+++++++ +.|+|++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~-------~-----~~-~~~~~~~l~~~~~D~V~i 69 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAA-EAIAGAY-------G-----CE-VRTIDAIEAAADIDAVVI 69 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHHT-------T-----CE-ECCHHHHHHCTTCCEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHH-HHHHHHh-------C-----CC-cCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987433488877 689876532 2222222 2 12 579999998 8999999
Q ss_pred cCCCC
Q 020301 243 HPVLD 247 (328)
Q Consensus 243 ~~plt 247 (328)
++|..
T Consensus 70 ~tp~~ 74 (331)
T 4hkt_A 70 CTPTD 74 (331)
T ss_dssp CSCGG
T ss_pred eCCch
Confidence 99943
No 192
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.37 E-value=0.00081 Score=62.98 Aligned_cols=105 Identities=14% Similarity=0.228 Sum_probs=62.8
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.+|+|||.|.+|..+|..|+ .-|. +|..||+..... +.............. .+.......++++.++.||+|++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la-~~g~~~V~L~D~~~~~~-~~~~~~l~~~~~~~~-~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCA-LRELADVVLYDVVKGMP-EGKALDLSHVTSVVD-TNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHH-HHHHHHHHHHHHHTT-CCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECChhHH-HHHHHHHHhhhhccC-CCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 58999999999999999975 4465 899999986432 221111111111111 1112222368888899999999999
Q ss_pred --CCChhh------hcc-c------cHH---HHhcCCCCcEEEEcCC
Q 020301 245 --VLDKTT------YHL-I------NKE---RLATMKKEAILVNCSR 273 (328)
Q Consensus 245 --plt~~t------~~l-i------~~~---~~~~mk~ga~lIN~aR 273 (328)
|..+.- +-- + -++ .+....|++++||.+-
T Consensus 87 g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 133 (331)
T 1pzg_A 87 GLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTN 133 (331)
T ss_dssp SCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 654421 111 0 111 2233358999999854
No 193
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.35 E-value=0.00047 Score=64.01 Aligned_cols=117 Identities=10% Similarity=0.158 Sum_probs=67.8
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.++|+|||.|.||..+|..++ .-|. +|..||++.... +.............. .........++ +.++.||+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la-~~g~~~V~l~D~~~~~~-~~~~~~l~~~~~~~~-~~~~i~~t~d~-~a~~~aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVG-KDNLADVVLFDIAEGIP-QGKALDITHSMVMFG-STSKVIGTDDY-ADISGSDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHH-HHHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCCchHH-HHHHHHHHhhhhhcC-CCcEEEECCCH-HHhCCCCEEEEe
Confidence 368999999999999999975 4466 899999986432 211000000000000 01111222466 678999999999
Q ss_pred CCCCh-----------hhhccccHH---HHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 020301 244 PVLDK-----------TTYHLINKE---RLATMKKEAILVNCSRGPVIDEVALVEHL 286 (328)
Q Consensus 244 ~plt~-----------~t~~li~~~---~~~~mk~ga~lIN~aRG~~vde~aL~~aL 286 (328)
++... ++..++ ++ .+....|++++|+++-..-+....+.++.
T Consensus 80 vg~p~~~g~~r~d~~~~~~~i~-~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 80 ASIPGRPKDDRSELLFGNARIL-DSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp CCCSSCCSSCGGGGHHHHHHHH-HHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHhhHHHH-HHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 94211 111111 11 22223579999999876555555666654
No 194
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.34 E-value=0.0011 Score=61.93 Aligned_cols=69 Identities=25% Similarity=0.363 Sum_probs=50.2
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (328)
.++||||+|.||+..++.+.+.-++++. ++|+++... ++..+.| + ...+.+++++++ +.|+|++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g-----~~~~~~~~~~l~~~~~D~V~i 71 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGA-QRLAEAN-------G-----AEAVASPDEVFARDDIDGIVI 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHTT-------T-----CEEESSHHHHTTCSCCCEEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987543478877 688876432 2222221 1 224579999999 8999999
Q ss_pred cCCCC
Q 020301 243 HPVLD 247 (328)
Q Consensus 243 ~~plt 247 (328)
++|..
T Consensus 72 ~tp~~ 76 (344)
T 3euw_A 72 GSPTS 76 (344)
T ss_dssp CSCGG
T ss_pred eCCch
Confidence 99943
No 195
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.34 E-value=0.00053 Score=60.76 Aligned_cols=97 Identities=21% Similarity=0.205 Sum_probs=63.1
Q ss_pred ccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 160 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
..++.|+++.|||.|.+|...++.| ...|++|+++++...+..++..+. +...... .... ++.+..+|+
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~L-l~~GA~VtVvap~~~~~l~~l~~~--------~~i~~i~-~~~~-~~dL~~adL 94 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGF-LQEGAAITVVAPTVSAEINEWEAK--------GQLRVKR-KKVG-EEDLLNVFF 94 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHH-GGGCCCEEEECSSCCHHHHHHHHT--------TSCEEEC-SCCC-GGGSSSCSE
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCCHHHHHHHHc--------CCcEEEE-CCCC-HhHhCCCCE
Confidence 4579999999999999999999997 578999999999876554433221 1111111 1112 345788999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|+.+.. .++ +|.......+ -.++||++.
T Consensus 95 VIaAT~-d~~----~N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 95 IVVATN-DQA----VNKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp EEECCC-CTH----HHHHHHHHSC-TTCEEEC--
T ss_pred EEECCC-CHH----HHHHHHHHHh-CCCEEEEeC
Confidence 987754 333 3444444455 557788754
No 196
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.31 E-value=0.00089 Score=62.41 Aligned_cols=69 Identities=20% Similarity=0.244 Sum_probs=48.2
Q ss_pred CEEEEEecCHHHHHHHHHHH-hcCCcEE-EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMV-EGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~-~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (328)
.++||||+|.||+..++.++ +.-++++ .++|+++... +...+.| +.. ..+.+++++++ .+|+|+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~-~~~a~~~-------g~~----~~~~~~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQL-EWAKNEL-------GVE----TTYTNYKDMIDTENIDAIF 76 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHH-HHHHHTT-------CCS----EEESCHHHHHTTSCCSEEE
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHH-HHHHHHh-------CCC----cccCCHHHHhcCCCCCEEE
Confidence 47999999999999999874 3358885 4689876432 2221211 211 23468999997 699999
Q ss_pred EcCCC
Q 020301 242 LHPVL 246 (328)
Q Consensus 242 l~~pl 246 (328)
+++|.
T Consensus 77 i~tp~ 81 (346)
T 3cea_A 77 IVAPT 81 (346)
T ss_dssp ECSCG
T ss_pred EeCCh
Confidence 99993
No 197
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.30 E-value=0.00067 Score=62.24 Aligned_cols=108 Identities=14% Similarity=0.101 Sum_probs=70.2
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|+..+. ++..+. . ......++++ + ++|+|
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L-~~~G~~~v~v~nRt~~ka-~~La~~---------~---~~~~~~~l~~-l-~~Div 182 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYL-KDNFAKDIYVVTRNPEKT-SEIYGE---------F---KVISYDELSN-L-KGDVI 182 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHH-HHTTCSEEEEEESCHHHH-HHHCTT---------S---EEEEHHHHTT-C-CCSEE
T ss_pred CccCCEEEEECCcHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHHHh---------c---CcccHHHHHh-c-cCCEE
Confidence 57899999999999999999997 57898 999999987542 221111 0 1111223444 4 89999
Q ss_pred EEcCCCC--hhhh-ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 241 SLHPVLD--KTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 241 ~l~~plt--~~t~-~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
+.+.|.. +++. -.+..+.| +++.+++++.=.+ ..+.=|.+|-+.|
T Consensus 183 InaTp~Gm~~~~~~~pi~~~~l---~~~~~v~DlvY~P-~~T~ll~~A~~~G 230 (282)
T 3fbt_A 183 INCTPKGMYPKEGESPVDKEVV---AKFSSAVDLIYNP-VETLFLKYARESG 230 (282)
T ss_dssp EECSSTTSTTSTTCCSSCHHHH---TTCSEEEESCCSS-SSCHHHHHHHHTT
T ss_pred EECCccCccCCCccCCCCHHHc---CCCCEEEEEeeCC-CCCHHHHHHHHCc
Confidence 9999963 2211 12555544 6788999986443 2344444555555
No 198
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.30 E-value=0.001 Score=62.50 Aligned_cols=69 Identities=26% Similarity=0.394 Sum_probs=50.2
Q ss_pred CEEEEEecCHHHHHHHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh--hcCCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--READVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~f-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--~~aDiV~ 241 (328)
.++||||+|.||+..++.+ +.. ++++. ++|+++... ++..+.| +. ..+.++++++ .+.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~lvav~d~~~~~~-~~~~~~~-------g~-----~~~~~~~~~l~~~~~D~V~ 71 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAY-TKSEKLKLVTCYSRTEDKR-EKFGKRY-------NC-----AGDATMEALLAREDVEMVI 71 (354)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTCSSEEEEEEECSSHHHH-HHHHHHH-------TC-----CCCSSHHHHHHCSSCCEEE
T ss_pred ceEEEEccCHHHHHHHHHH-HhCCCcEEEEEECCCHHHH-HHHHHHc-------CC-----CCcCCHHHHhcCCCCCEEE
Confidence 4799999999999999987 455 88866 779876532 2222222 21 2357999999 5699999
Q ss_pred EcCCCCh
Q 020301 242 LHPVLDK 248 (328)
Q Consensus 242 l~~plt~ 248 (328)
+++|...
T Consensus 72 i~tp~~~ 78 (354)
T 3db2_A 72 ITVPNDK 78 (354)
T ss_dssp ECSCTTS
T ss_pred EeCChHH
Confidence 9999543
No 199
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.29 E-value=0.00085 Score=61.99 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=47.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCC--cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
++|+|||.|.||..+|..|+ .-| .+|..||++... .+.....+.......+ ..... ...++ +.++.||+|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~-~~g~~~~V~l~d~~~~~-~~~~~~~l~~~~~~~~-~~~~~-~~~d~-~~~~~aDvViia 76 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLI-AQGVADDYVFIDANEAK-VKADQIDFQDAMANLE-AHGNI-VINDW-AALADADVVIST 76 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSSHHH-HHHHHHHHHHHGGGSS-SCCEE-EESCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEcCCHHH-HHHHHHHHHhhhhhcC-CCeEE-EeCCH-HHhCCCCEEEEe
Confidence 47999999999999999875 346 699999998643 2222111110000000 01111 12466 678999999999
Q ss_pred CCC
Q 020301 244 PVL 246 (328)
Q Consensus 244 ~pl 246 (328)
+|.
T Consensus 77 v~~ 79 (309)
T 1hyh_A 77 LGN 79 (309)
T ss_dssp CSC
T ss_pred cCC
Confidence 995
No 200
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.28 E-value=0.00062 Score=55.99 Aligned_cols=101 Identities=9% Similarity=0.105 Sum_probs=69.1
Q ss_pred CCEEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 165 g~tvgIiG~----G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
-++++|||. |++|..+++.| +..|.+|+..+|.... . .+...+.+++|+....|++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l-~~~G~~v~~Vnp~~~~-----------------i--~G~~~y~sl~~l~~~vDlv 81 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYL-LEHGYDVYPVNPKYEE-----------------V--LGRKCYPSVLDIPDKIEVV 81 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSE-----------------E--TTEECBSSGGGCSSCCSEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHH-HHCCCEEEEECCCCCe-----------------E--CCeeccCCHHHcCCCCCEE
Confidence 678999999 79999999997 5788887766664311 0 1223356889988899999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
++++|. +....++ ++..+. ..++++++. |. .++.+.++.++..+.
T Consensus 82 vi~vp~-~~~~~vv-~~~~~~-gi~~i~~~~--g~--~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 82 DLFVKP-KLTMEYV-EQAIKK-GAKVVWFQY--NT--YNREASKKADEAGLI 126 (144)
T ss_dssp EECSCH-HHHHHHH-HHHHHH-TCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred EEEeCH-HHHHHHH-HHHHHc-CCCEEEECC--Cc--hHHHHHHHHHHcCCE
Confidence 999994 5555655 344443 334566553 32 367778887776555
No 201
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.28 E-value=0.0012 Score=64.38 Aligned_cols=146 Identities=14% Similarity=0.097 Sum_probs=82.9
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHh-----------hhhhhhhcCCCCCccccccCCHHH
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVT-----------AYGQFLKANGEQPVTWKRASSMDE 232 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~e 232 (328)
+-++|+|||+|-+|..+|..++ ..|.+|+++|.++..- +.... +.-+.....| .....++.++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A-~~G~~V~g~Did~~kV-~~ln~G~~pi~Epgl~ell~~~~~~g----~l~~tt~~~~ 93 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFA-LLGHRVVGYDVNPSIV-ERLRAGRPHIYEPGLEEALGRALSSG----RLSFAESAEE 93 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HHTCEEEEECSCHHHH-HHHHTTCCSSCCTTHHHHHHHHHHTT----CEEECSSHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHH-hCCCcEEEEECCHHHH-HHHHCCCCCCCCCCHHHHHHHHHHcC----CeeEEcCHHH
Confidence 4568999999999999999985 5799999999986531 11100 0000000001 1122457889
Q ss_pred HhhcCCEEEEcCCCChhhh-c------ccc--HHHHhcCC---CCcEEEEcCCCcccCHHHHH-HHHHcCCccEEEEe-C
Q 020301 233 VLREADVISLHPVLDKTTY-H------LIN--KERLATMK---KEAILVNCSRGPVIDEVALV-EHLKQNPMFRVGLD-V 298 (328)
Q Consensus 233 ll~~aDiV~l~~plt~~t~-~------li~--~~~~~~mk---~ga~lIN~aRG~~vde~aL~-~aL~~g~i~gaalD-V 298 (328)
.++.||++++|+| ||... + +.. +..-+.|+ +|.++|.-|.-.+=-.+.+. ..|++.. .+.-++ +
T Consensus 94 ai~~ad~~~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~ 171 (444)
T 3vtf_A 94 AVAATDATFIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVA 171 (444)
T ss_dssp HHHTSSEEEECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEE
T ss_pred HHhcCCceEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceee
Confidence 9999999999998 44322 1 111 22223343 67899998886553334333 3444321 222122 2
Q ss_pred CCCCCCCC----CCcccCCCeEE
Q 020301 299 FEDEPYMK----PGLSEMKNAIV 317 (328)
Q Consensus 299 ~~~EP~~~----~~L~~~~nvil 317 (328)
|.+|-+.+ ..+...+++++
T Consensus 172 ~~PErl~eG~a~~d~~~~~riVi 194 (444)
T 3vtf_A 172 SNPEFLREGSALEDFFKPDRIVI 194 (444)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEE
T ss_pred cCcccccCCccccccccCCcEEE
Confidence 34565432 13556666663
No 202
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.00067 Score=65.01 Aligned_cols=106 Identities=16% Similarity=0.294 Sum_probs=67.0
Q ss_pred EEEEEecCHHHHHHHHHHHhc-------CCcEEEEEcCCchhH---HHHHHhhhhh---hhhcCCCCCccccccCCHHHH
Q 020301 167 TVGVIGAGRIGSAYARMMVEG-------FKMNLIYYDLYQATR---LEKFVTAYGQ---FLKANGEQPVTWKRASSMDEV 233 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~-------fg~~V~~~d~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~el 233 (328)
+|+|||.|.-|.++|..|++. |+.+|..|.+.++.. ..+.+....+ .+ ..-..+.......++++.
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YL-pgv~Lp~~i~~t~dl~~a 114 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYL-PGITLPDNLVANPDLIDS 114 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTB-TTCCCCSSEEEESCHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccC-CCCcCCCCcEEeCCHHHH
Confidence 799999999999999987642 335688887764311 1111110000 00 000112223334689999
Q ss_pred hhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 234 l~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
++.||+|++.+| +...+.++ ++.-..++++..+|+++-|=
T Consensus 115 l~~ad~ii~avP-s~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 115 VKDVDIIVFNIP-HQFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp HTTCSEEEECSC-GGGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred HhcCCEEEEECC-hhhhHHHH-HHhccccCCCceeEEecccc
Confidence 999999999999 34444443 44455678899999999884
No 203
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.28 E-value=0.002 Score=59.89 Aligned_cols=121 Identities=14% Similarity=0.187 Sum_probs=75.0
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch--hHHHHHHhhhhhhhhcCCCCCccccccCCH---HHHh
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEVL 234 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~ell 234 (328)
.++.|+++.|+|.|.+|+.++..| ...|+ +|.+++|+.+ .+.++..+.+.. ..+. ........++ .+.+
T Consensus 144 ~~l~gk~~lVlGAGGaaraia~~L-~~~G~~~v~v~nRt~~~~~~a~~la~~~~~---~~~~-~v~~~~~~~l~~~~~~l 218 (312)
T 3t4e_A 144 FDMRGKTMVLLGAGGAATAIGAQA-AIEGIKEIKLFNRKDDFFEKAVAFAKRVNE---NTDC-VVTVTDLADQHAFTEAL 218 (312)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTHHHHHHHHHHHHHH---HSSC-EEEEEETTCHHHHHHHH
T ss_pred CCcCCCEEEEECcCHHHHHHHHHH-HHcCCCEEEEEECCCchHHHHHHHHHHhhh---ccCc-ceEEechHhhhhhHhhc
Confidence 357899999999999999999997 57898 8999999832 122222222211 0010 0111123344 5678
Q ss_pred hcCCEEEEcCCCCh--hhhccc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 235 READVISLHPVLDK--TTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 235 ~~aDiV~l~~plt~--~t~~li--~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
.++|+|+.+.|..- .....+ +. +.++++.+++++.=.+ ..+.=|.+|-+.|.
T Consensus 219 ~~~DiIINaTp~Gm~~~~~~~~~~~~---~~l~~~~~v~D~vY~P-~~T~ll~~A~~~G~ 274 (312)
T 3t4e_A 219 ASADILTNGTKVGMKPLENESLIGDV---SLLRPELLVTECVYNP-HMTKLLQQAQQAGC 274 (312)
T ss_dssp HHCSEEEECSSTTSTTSTTCCSCCCG---GGSCTTCEEEECCCSS-SSCHHHHHHHHTTC
T ss_pred cCceEEEECCcCCCCCCCCCcccCCH---HHcCCCCEEEEeccCC-CCCHHHHHHHHCCC
Confidence 89999999999652 111111 32 3467888999986544 34555555655553
No 204
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.27 E-value=0.001 Score=61.66 Aligned_cols=110 Identities=14% Similarity=0.180 Sum_probs=61.4
Q ss_pred CEEEEEecCHHHHH-HHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh-hcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~-vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~ 243 (328)
.++||||+|.||+. +++.+.+.-++++.++|+++... +++.+.| +... .+.+..+++ ..+|+|+++
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~-~~~a~~~-------g~~~----~~~~~~~~l~~~~D~V~i~ 70 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVL-GTLATRY-------RVSA----TCTDYRDVLQYGVDAVMIH 70 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHH-HHHHHHT-------TCCC----CCSSTTGGGGGCCSEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHHc-------CCCc----cccCHHHHhhcCCCEEEEE
Confidence 37999999999984 88886432378888999986532 2222222 2110 023334455 789999999
Q ss_pred CCCChhhhccccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcc
Q 020301 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga-~lIN~-aRG~~vde~aL~~aL~~g~i~ 292 (328)
+| +....-+-. ..++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 71 tp--~~~h~~~~~---~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 71 AA--TDVHSTLAA---FFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp SC--GGGHHHHHH---HHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred CC--chhHHHHHH---HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 99 332221112 2334453 55542 111223345566666655443
No 205
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.26 E-value=0.00096 Score=62.02 Aligned_cols=69 Identities=12% Similarity=0.170 Sum_probs=47.4
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (328)
.++||||+|.||+..++.+.+.-++++. ++|+++... +++.+ ..+.. ..+.++++++. +.|+|++
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~-~~~a~-------~~~~~----~~~~~~~~ll~~~~~D~V~i 73 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESA-QAFAN-------KYHLP----KAYDKLEDMLADESIDVIYV 73 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTT-CC----------CCCCS----CEESCHHHHHTCTTCCEEEE
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHHHH-------HcCCC----cccCCHHHHhcCCCCCEEEE
Confidence 4799999999999999887544467765 668876432 11111 11110 13579999998 7999999
Q ss_pred cCCC
Q 020301 243 HPVL 246 (328)
Q Consensus 243 ~~pl 246 (328)
++|.
T Consensus 74 ~tp~ 77 (329)
T 3evn_A 74 ATIN 77 (329)
T ss_dssp CSCG
T ss_pred CCCc
Confidence 9994
No 206
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.26 E-value=0.00095 Score=61.85 Aligned_cols=66 Identities=17% Similarity=0.286 Sum_probs=47.2
Q ss_pred EEEEEecCHHHHHH-HHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEEE
Q 020301 167 TVGVIGAGRIGSAY-ARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (328)
Q Consensus 167 tvgIiG~G~IG~~v-A~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (328)
++||||+|.||+.+ ++.+.+ -+++++ ++|+++... +++.+.| +.. ..+.+++++++ ++|+|++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~-~~~~~~~-------g~~----~~~~~~~~~l~~~~~D~V~i 68 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERG-AAYATEN-------GIG----KSVTSVEELVGDPDVDAVYV 68 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHH-HHHHHHT-------TCS----CCBSCHHHHHTCTTCCEEEE
T ss_pred eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHH-HHHHHHc-------CCC----cccCCHHHHhcCCCCCEEEE
Confidence 69999999999998 777655 788876 679886532 2222222 211 13468999997 4999999
Q ss_pred cCC
Q 020301 243 HPV 245 (328)
Q Consensus 243 ~~p 245 (328)
++|
T Consensus 69 ~tp 71 (332)
T 2glx_A 69 STT 71 (332)
T ss_dssp CSC
T ss_pred eCC
Confidence 999
No 207
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.25 E-value=0.0011 Score=61.60 Aligned_cols=70 Identities=11% Similarity=0.133 Sum_probs=50.2
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (328)
.++||||+|.||+..++.+.+.-+++|. ++|+++.. .+++.+.| +.. ..+.++++++. +.|+|++
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~-------~~~----~~~~~~~~ll~~~~~D~V~i 73 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLEN-AQKMAKEL-------AIP----VAYGSYEELCKDETIDIIYI 73 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHH-HHHHHHHT-------TCC----CCBSSHHHHHHCTTCSEEEE
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHH-HHHHHHHc-------CCC----ceeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987543478877 67887643 22222222 211 23579999998 7999999
Q ss_pred cCCCC
Q 020301 243 HPVLD 247 (328)
Q Consensus 243 ~~plt 247 (328)
++|..
T Consensus 74 ~tp~~ 78 (330)
T 3e9m_A 74 PTYNQ 78 (330)
T ss_dssp CCCGG
T ss_pred cCCCH
Confidence 99943
No 208
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.24 E-value=0.0012 Score=61.68 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=49.6
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (328)
.++||||+|.||+..++.+.+.-++++. ++|+++... ++..+.| +. ...+.+++++++ .+|+|++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~-------~~----~~~~~~~~~ll~~~~~D~V~i 70 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRL-REMKEKL-------GV----EKAYKDPHELIEDPNVDAVLV 70 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHH-HHHHHHH-------TC----SEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHHh-------CC----CceeCCHHHHhcCCCCCEEEE
Confidence 3799999999999999987433478877 679876532 2222222 11 113579999998 8999999
Q ss_pred cCCC
Q 020301 243 HPVL 246 (328)
Q Consensus 243 ~~pl 246 (328)
++|.
T Consensus 71 ~tp~ 74 (344)
T 3ezy_A 71 CSST 74 (344)
T ss_dssp CSCG
T ss_pred cCCC
Confidence 9994
No 209
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=97.22 E-value=0.062 Score=50.01 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=74.6
Q ss_pred ccCCCEEEEEecC--HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 162 ~l~g~tvgIiG~G--~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
.+.|.+|+++|=| ++.++++..+ ..||++|.+..|..-...++..+...+.++..|. ......+++|.+++||+
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~---~v~~~~d~~eav~~aDv 239 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIAC-AKMGMNFVACGPEELKPRSDVFKRCQEIVKETDG---SVSFTSNLEEALAGADV 239 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHH-HHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCC---EEEEESCHHHHHTTCSE
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcCC---eEEEEcCHHHHHccCCE
Confidence 4789999999986 9999999987 5899999999885321111111100000111221 12234789999999999
Q ss_pred EEE-cCCC------Chh-----hhccccHHHHhcC-CCCcEEEEcC---CCcccCHH
Q 020301 240 ISL-HPVL------DKT-----TYHLINKERLATM-KKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 240 V~l-~~pl------t~~-----t~~li~~~~~~~m-k~ga~lIN~a---RG~~vde~ 280 (328)
|.. .... .++ ...-++++.++.+ ||+++|.-+. ||.=|+.+
T Consensus 240 vyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~e 296 (325)
T 1vlv_A 240 VYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYE 296 (325)
T ss_dssp EEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHH
T ss_pred EEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccCHH
Confidence 977 3310 011 1244789999999 9999999884 66655544
No 210
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.22 E-value=0.00054 Score=63.34 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=60.0
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.++||||+|.||+.+++.+.+.-++++. ++|+++... + ..|.. ...+.++.+. .++|+|++|.
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~-~-----------~~g~~---~~~~~~l~~~-~~~DvViiat 73 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEV-P-----------FELQP---FRVVSDIEQL-ESVDVALVCS 73 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------------------CCTT---SCEESSGGGS-SSCCEEEECS
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHH-H-----------HcCCC---cCCHHHHHhC-CCCCEEEECC
Confidence 4799999999999999987544578887 688876431 1 11211 1223455555 7899999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCC--C-cccCHHHHHHHHHcCC
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSR--G-PVIDEVALVEHLKQNP 290 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aR--G-~~vde~aL~~aL~~g~ 290 (328)
|. .+.. +.....++.|..++...= + ..-+.+.|.++.++..
T Consensus 74 p~--~~h~---~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 74 PS--REVE---RTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp CH--HHHH---HHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred Cc--hhhH---HHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 83 3222 222334455666665421 2 2223456666666543
No 211
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.21 E-value=0.00016 Score=65.14 Aligned_cols=96 Identities=19% Similarity=0.251 Sum_probs=62.6
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhcCCCCC
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (328)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|+..- ++.+...+.+.+. .....
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La-~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~---np~~~ 102 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLA-SAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI---NPHIA 102 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH---CTTSE
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHH-HcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHH---CCCcE
Confidence 4689999999999999999999984 6786 8999998751 1111111111100 00000
Q ss_pred ccc-c-cc--CCHHHHhhcCCEEEEcCCCChhhhccccHHHHhc
Q 020301 222 VTW-K-RA--SSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (328)
Q Consensus 222 ~~~-~-~~--~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~ 261 (328)
... . .. .+++++++++|+|+.+.+ +.+++.++++...+.
T Consensus 103 v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~ 145 (249)
T 1jw9_B 103 ITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA 145 (249)
T ss_dssp EEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH
T ss_pred EEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc
Confidence 000 0 01 145678999999999987 678888888877664
No 212
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.20 E-value=0.0015 Score=60.78 Aligned_cols=122 Identities=14% Similarity=0.154 Sum_probs=67.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
++|+|||.|.||..+|..|+ .-|. +|..||++.... +.....+...... . ...... ..+. +.++.||+|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~-~~g~~~~V~l~D~~~~~~-~~~~~~l~~~~~~-~-~~~~i~-~~d~-~~~~~aDvViia 74 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALL-MKGFAREMVLIDVDKKRA-EGDALDLIHGTPF-T-RRANIY-AGDY-ADLKGSDVVIVA 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSSHHHH-HHHHHHHHHHGGG-S-CCCEEE-ECCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHHH-HHHHHHHHhhhhh-c-CCcEEE-eCCH-HHhCCCCEEEEc
Confidence 37999999999999999875 4566 999999986422 2211111000000 0 011111 1343 567999999999
Q ss_pred CCCChhhhcc-----------ccHHHHhcC---CCCcEEEEcCCCcccCHHHHHHHH--HcCCccEE
Q 020301 244 PVLDKTTYHL-----------INKERLATM---KKEAILVNCSRGPVIDEVALVEHL--KQNPMFRV 294 (328)
Q Consensus 244 ~plt~~t~~l-----------i~~~~~~~m---k~ga~lIN~aRG~~vde~aL~~aL--~~g~i~ga 294 (328)
+|... ..++ +-.+.++.+ .|++++|+++-+.=+....+.+.. ...++.|.
T Consensus 75 v~~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 75 AGVPQ-KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp CCCCC-CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred cCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 99533 1111 012333333 578999998654433223333322 33455554
No 213
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.19 E-value=0.063 Score=49.45 Aligned_cols=107 Identities=13% Similarity=0.045 Sum_probs=74.3
Q ss_pred ccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
.+.|.+|+++|= +++.++.+..+ ..||++|.+..|..-...++..+. + ......++++.+++||+|
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~----~--------~~~~~~d~~eav~~aDvv 217 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVA-PLAGLKVRVATPKGYEPDPGLLKR----A--------NAFFTHDPKEAALGAHAL 217 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHH----H--------TCEEESCHHHHHTTCSEE
T ss_pred CcCCcEEEEECCCchhHHHHHHHH-HHcCCEEEEECCchhcCCHHHHhh----c--------eeEEECCHHHHhcCCCEE
Confidence 478999999998 88999999986 589999999988532111111110 0 022347899999999999
Q ss_pred EE-cCCCC-----hh------hhccccHHHHhcCCCCcEEEEcC---CCcccCHHH
Q 020301 241 SL-HPVLD-----KT------TYHLINKERLATMKKEAILVNCS---RGPVIDEVA 281 (328)
Q Consensus 241 ~l-~~plt-----~~------t~~li~~~~~~~mk~ga~lIN~a---RG~~vde~a 281 (328)
.. ..... +. ...-++++.++++||++++.-+. ||.=|+.+-
T Consensus 218 y~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~eV 273 (301)
T 2ef0_A 218 YTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEEA 273 (301)
T ss_dssp EECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHH
T ss_pred EecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHHH
Confidence 77 33110 11 12447899999999999999986 776666553
No 214
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.18 E-value=0.00097 Score=60.98 Aligned_cols=117 Identities=17% Similarity=0.214 Sum_probs=71.2
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
++.|+++.|+|.|.||+++|+.| ...| +|++++|+... .++..+.+..... ...... ....++.+.+.++|+|+
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L-~~~G-~V~v~~r~~~~-~~~l~~~~~~~~~--~~~~~~-~d~~~~~~~~~~~DilV 198 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFEL-AKDN-NIIIANRTVEK-AEALAKEIAEKLN--KKFGEE-VKFSGLDVDLDGVDIII 198 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHH-TSSS-EEEEECSSHHH-HHHHHHHHHHHHT--CCHHHH-EEEECTTCCCTTCCEEE
T ss_pred CcCCCEEEEECchHHHHHHHHHH-HHCC-CEEEEECCHHH-HHHHHHHHhhhcc--ccccee-EEEeeHHHhhCCCCEEE
Confidence 57899999999999999999997 5789 99999998643 2222222211000 000000 01123355678899999
Q ss_pred EcCCCChhhh---ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 020301 242 LHPVLDKTTY---HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (328)
Q Consensus 242 l~~plt~~t~---~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~ 288 (328)
.+.|...... ..+. ..+.++++++++|+.-.+ ..+. |.+..++
T Consensus 199 n~ag~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p-~~t~-ll~~a~~ 244 (287)
T 1nvt_A 199 NATPIGMYPNIDVEPIV--KAEKLREDMVVMDLIYNP-LETV-LLKEAKK 244 (287)
T ss_dssp ECSCTTCTTCCSSCCSS--CSTTCCSSSEEEECCCSS-SSCH-HHHHHHT
T ss_pred ECCCCCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC-ccCH-HHHHHHH
Confidence 9998654211 1120 135678999999998653 3333 4444443
No 215
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.18 E-value=0.0012 Score=61.83 Aligned_cols=68 Identities=22% Similarity=0.308 Sum_probs=49.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhc-CCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~-fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (328)
.++||||+|.||+..++.+.+. -++++. ++|+++... ++..+.| + ...+.+++++++ +.|+|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~~~~~-------~-----~~~~~~~~~ll~~~~~D~V~ 80 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAAL-KAAVERT-------G-----ARGHASLTDMLAQTDADIVI 80 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHH-HHHHHHH-------C-----CEEESCHHHHHHHCCCSEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCCCEEE
Confidence 5799999999999999987433 388866 789886532 2222222 2 134579999998 799999
Q ss_pred EcCCC
Q 020301 242 LHPVL 246 (328)
Q Consensus 242 l~~pl 246 (328)
+++|.
T Consensus 81 i~tp~ 85 (354)
T 3q2i_A 81 LTTPS 85 (354)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 99994
No 216
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=97.14 E-value=0.053 Score=50.64 Aligned_cols=106 Identities=13% Similarity=0.111 Sum_probs=70.0
Q ss_pred ccCCCEEEEEecC--HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 162 ~l~g~tvgIiG~G--~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
.+.|.+|+++|=| +++.+++..+ ..||++|.+..|..-...++..+.-.+.++..|. ......++++.+++||+
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~---~v~~~~d~~eav~~aDv 227 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAA-ALTGLDLRLVAPQACWPEAALVTECRALAQQNGG---NITLTEDVAKGVEGADF 227 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHH-HHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTC---EEEEESCHHHHHTTCSE
T ss_pred CCCCcEEEEECCCccchHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCC---eEEEEECHHHHhCCCCE
Confidence 5789999999986 9999999986 5799999999885321111111100001112221 12234789999999999
Q ss_pred EEEcCC-CC-------hh-----hhccccHHHHhcC-CCCcEEEEc
Q 020301 240 ISLHPV-LD-------KT-----TYHLINKERLATM-KKEAILVNC 271 (328)
Q Consensus 240 V~l~~p-lt-------~~-----t~~li~~~~~~~m-k~ga~lIN~ 271 (328)
|..-.= .. ++ ...-+|.+.++.+ ||+++|.-+
T Consensus 228 vytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHc 273 (333)
T 1duv_G 228 IYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHC 273 (333)
T ss_dssp EEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEEC
T ss_pred EEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECC
Confidence 977322 10 11 1235799999999 999999887
No 217
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=97.13 E-value=0.13 Score=47.74 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=75.0
Q ss_pred ccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
.+.|.+|+++|= +++.++++..+ ..||++|.+..|..-...++..+...+.++..|. ......+++|.+++||+|
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~---~~~~~~d~~eav~~aDvv 227 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAG-TKLGADVVVATPEGYEPDEKVIKWAEQNAAESGG---SFELLHDPVKAVKDADVI 227 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTC---EEEEESCHHHHTTTCSEE
T ss_pred CcCCcEEEEECCCcchHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcCC---eEEEEeCHHHHhCCCCEE
Confidence 478999999997 89999999986 5899999999885321111111100000111121 122347899999999999
Q ss_pred EEcCC-C------Chh-----hhccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 241 SLHPV-L------DKT-----TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 241 ~l~~p-l------t~~-----t~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
..-.= . .++ ...-++.+.++.+||+++|.-+. ||.=|+.+
T Consensus 228 y~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~e 282 (315)
T 1pvv_A 228 YTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDD 282 (315)
T ss_dssp EECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCHH
Confidence 77332 1 111 12457999999999999999884 66655554
No 218
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.11 E-value=0.0012 Score=62.16 Aligned_cols=66 Identities=20% Similarity=0.323 Sum_probs=48.6
Q ss_pred CEEEEEecCHHHHHHHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~f-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (328)
.++||||+|.||+..++.+ +.. ++++. ++|+++... + .... .+ ...+.+++++++ +.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~l~av~d~~~~~~-~-~a~~-------~g-----~~~~~~~~~ll~~~~~D~V~ 70 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLA-SAADNLEVHGVFDILAEKR-E-AAAQ-------KG-----LKIYESYEAVLADEKVDAVL 70 (359)
T ss_dssp EEEEEECCSHHHHHHHHHH-HTSTTEEEEEEECSSHHHH-H-HHHT-------TT-----CCBCSCHHHHHHCTTCCEEE
T ss_pred CcEEEECcCHHHHHHHHHH-HhCCCcEEEEEEcCCHHHH-H-HHHh-------cC-----CceeCCHHHHhcCCCCCEEE
Confidence 4799999999999999987 455 78876 568876542 1 1111 12 234579999998 789999
Q ss_pred EcCCC
Q 020301 242 LHPVL 246 (328)
Q Consensus 242 l~~pl 246 (328)
+|.|.
T Consensus 71 i~tp~ 75 (359)
T 3e18_A 71 IATPN 75 (359)
T ss_dssp ECSCG
T ss_pred EcCCc
Confidence 99994
No 219
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.11 E-value=0.0013 Score=64.11 Aligned_cols=116 Identities=13% Similarity=0.166 Sum_probs=72.0
Q ss_pred CCCEEEEEecCHH--HHHHHHHHHh--c-CCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCC
Q 020301 164 KGQTVGVIGAGRI--GSAYARMMVE--G-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (328)
Q Consensus 164 ~g~tvgIiG~G~I--G~~vA~~l~~--~-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (328)
...+|+|||.|.+ |..+++.+++ . .| +|..||+.+... +.. ......+.. .+......+++++.++.||
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~l-e~~-~~~~~~l~~---~~~~I~~TtD~~eAl~dAD 77 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAA-QKN-EVIGNHSGN---GRWRYEAVSTLKKALSAAD 77 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHH-HHH-HHHHTTSTT---SCEEEEEESSHHHHHTTCS
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHH-HHH-HHHHHHHhc---cCCeEEEECCHHHHhcCCC
Confidence 3568999999997 5788887653 2 36 999999986431 111 111111111 2233444578999999999
Q ss_pred EEEEcCCCC-----------hhhhccccH------------------------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 020301 239 VISLHPVLD-----------KTTYHLINK------------------------ERLATMKKEAILVNCSRGPVIDEVALV 283 (328)
Q Consensus 239 iV~l~~plt-----------~~t~~li~~------------------------~~~~~mk~ga~lIN~aRG~~vde~aL~ 283 (328)
||+++++-. |.-.++... +.+....|++++||++---=+-..++.
T Consensus 78 fVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~ 157 (450)
T 3fef_A 78 IVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLY 157 (450)
T ss_dssp EEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHH
T ss_pred EEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHH
Confidence 999999632 333343221 233344589999999876544444554
Q ss_pred HH
Q 020301 284 EH 285 (328)
Q Consensus 284 ~a 285 (328)
+.
T Consensus 158 k~ 159 (450)
T 3fef_A 158 KV 159 (450)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 220
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.09 E-value=0.0018 Score=60.81 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=49.6
Q ss_pred cCCCEEEEEecCHHHH-HHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCC
Q 020301 163 LKGQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EAD 238 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~-~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aD 238 (328)
..-.++||||+|.||+ .+++.+.+.-+++|. ++|+++.. .+++.+.| + ...+.+++++++ +.|
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~a~~~-------g-----~~~~~~~~~ll~~~~~D 91 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDR-AKRFTERF-------G-----GEPVEGYPALLERDDVD 91 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHH-HHHHHHHH-------C-----SEEEESHHHHHTCTTCS
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHH-HHHHHHHc-------C-----CCCcCCHHHHhcCCCCC
Confidence 3446899999999998 788887433388876 67887643 22222222 2 123479999997 589
Q ss_pred EEEEcCCCC
Q 020301 239 VISLHPVLD 247 (328)
Q Consensus 239 iV~l~~plt 247 (328)
+|++|+|..
T Consensus 92 ~V~i~tp~~ 100 (350)
T 3rc1_A 92 AVYVPLPAV 100 (350)
T ss_dssp EEEECCCGG
T ss_pred EEEECCCcH
Confidence 999999943
No 221
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.09 E-value=0.0031 Score=59.26 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=67.4
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (328)
.++||||+|.||+.+++.+.+.-++++. ++|+++.. .+++.+.| +..+ ....+.+++++++ ..|+|++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~-~~~~a~~~-------~~~~-~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEK-AKAFATAN-------NYPE-STKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHH-HHHHHHHT-------TCCT-TCEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHH-HHHHHHHh-------CCCC-CCeeeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987433467764 68887643 22222222 2100 1123578999997 5999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcc
Q 020301 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga-~lIN~-aRG~~vde~aL~~aL~~g~i~ 292 (328)
++| +.+.. +-....++.|. +++.- ---.+-+.+.|.++.++..+.
T Consensus 78 ~tp--~~~h~---~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 78 PLP--TSLHV---EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp CCC--GGGHH---HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred cCC--hHHHH---HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 999 33222 22233455665 44432 112223446778877765543
No 222
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.09 E-value=0.0013 Score=62.62 Aligned_cols=39 Identities=26% Similarity=0.490 Sum_probs=35.2
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
.-+.|+||+|+|.|.+|+.+++.+ +.+|++|+++|+++.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa-~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAA-KEMGYKIAVLDPTKN 48 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSTT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCCC
Confidence 347899999999999999999996 799999999998764
No 223
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.09 E-value=0.002 Score=60.80 Aligned_cols=65 Identities=14% Similarity=0.204 Sum_probs=46.5
Q ss_pred CEEEEEecCHHHHH-HHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEE
Q 020301 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (328)
Q Consensus 166 ~tvgIiG~G~IG~~-vA~~l~~~f-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (328)
.++||||+|.||+. .++.+ +.. +++|. ++|+++....+ .| + +...+.+++++++ ..|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~~----~~-------~----~~~~~~~~~~ll~~~~~D~V 71 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLI-RSVPGLNLAFVASRDEEKVKR----DL-------P----DVTVIASPEAAVQHPDVDLV 71 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTSTTEEEEEEECSCHHHHHH----HC-------T----TSEEESCHHHHHTCTTCSEE
T ss_pred ceEEEECCCHHHHHHHHHHH-hhCCCeEEEEEEcCCHHHHHh----hC-------C----CCcEECCHHHHhcCCCCCEE
Confidence 47999999999997 67765 444 78876 67887643211 11 1 1223579999998 78999
Q ss_pred EEcCCC
Q 020301 241 SLHPVL 246 (328)
Q Consensus 241 ~l~~pl 246 (328)
++|.|.
T Consensus 72 ~i~tp~ 77 (364)
T 3e82_A 72 VIASPN 77 (364)
T ss_dssp EECSCG
T ss_pred EEeCCh
Confidence 999994
No 224
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.08 E-value=0.0016 Score=60.81 Aligned_cols=71 Identities=21% Similarity=0.267 Sum_probs=50.0
Q ss_pred CEEEEEecCHHHHHHHHHHH-hcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~-~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (328)
.++||||+|.||+..++.+. +.-++++. ++|+++.. .++..+.| +. ....+.+++++++. .|+|+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~-~~~~~~~~-------g~---~~~~~~~~~~ll~~~~~D~V~ 71 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEA-AQKVVEQY-------QL---NATVYPNDDSLLADENVDAVL 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHH-HHHHHHHT-------TC---CCEEESSHHHHHHCTTCCEEE
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHH-HHHHHHHh-------CC---CCeeeCCHHHHhcCCCCCEEE
Confidence 37999999999999999874 33578876 67887643 22222222 21 11245799999987 99999
Q ss_pred EcCCCC
Q 020301 242 LHPVLD 247 (328)
Q Consensus 242 l~~plt 247 (328)
+++|..
T Consensus 72 i~tp~~ 77 (344)
T 3mz0_A 72 VTSWGP 77 (344)
T ss_dssp ECSCGG
T ss_pred ECCCch
Confidence 999943
No 225
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.08 E-value=0.0021 Score=60.05 Aligned_cols=103 Identities=17% Similarity=0.315 Sum_probs=60.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
++|+|||.|.+|..+|..++ .-|. +|..||++.... +.............. .........++ +.++.||+|++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la-~~g~~~V~L~Di~~~~l-~~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLG-QKDLGDVYMFDIIEGVP-QGKALDLNHCMALIG-SPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSTTHH-HHHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECCHHHH-HHHHHHHHhHhhccC-CCCEEEECCCH-HHHCCCCEEEEcC
Confidence 68999999999999999875 4576 899999986432 211111101111001 11112222567 6789999999998
Q ss_pred --CCChh-hh--------ccccHH---HHhcCCCCcEEEEcCC
Q 020301 245 --VLDKT-TY--------HLINKE---RLATMKKEAILVNCSR 273 (328)
Q Consensus 245 --plt~~-t~--------~li~~~---~~~~mk~ga~lIN~aR 273 (328)
|..+. |+ .++ .+ .+....|++++|+++-
T Consensus 91 g~p~k~g~tr~dl~~~n~~i~-~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 91 GVPRKPNMTRSDLLTVNAKIV-GSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp SCCCCTTCCSGGGHHHHHHHH-HHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCCchhhHHhhhHHHH-HHHHHHHHHHCCCeEEEEecC
Confidence 43221 11 111 11 2222348999998754
No 226
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.07 E-value=0.0013 Score=60.77 Aligned_cols=123 Identities=15% Similarity=0.133 Sum_probs=67.7
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
++|+|||.|.+|..+|..++ ..|. +|..||+..... +.....+.... . -....... ..+. +.++.||+|+++
T Consensus 1 mkI~VIGaG~vG~~la~~la-~~g~~~eV~L~D~~~~~~-~~~~~~l~~~~-~-~~~~~~i~-~~~~-~a~~~aDvVIi~ 74 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALV-LRGSCSELVLVDRDEDRA-QAEAEDIAHAA-P-VSHGTRVW-HGGH-SELADAQVVILT 74 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSSHHHH-HHHHHHHTTSC-C-TTSCCEEE-EECG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCCHHHH-HHHHHhhhhhh-h-hcCCeEEE-ECCH-HHhCCCCEEEEc
Confidence 37999999999999999874 5577 999999986422 22111111000 0 00011111 1243 568999999999
Q ss_pred CCCChh-----------hhcccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEE
Q 020301 244 PVLDKT-----------TYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (328)
Q Consensus 244 ~plt~~-----------t~~li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ga 294 (328)
++.... +..++. .+.+....|++++|+++-+.=+....+.+.....++.|.
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 953221 111110 122333468999999866543334445555444555555
No 227
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.05 E-value=0.00015 Score=66.64 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=62.6
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh-hcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~~ 244 (328)
++++|||.|.||..+|..|+ .-|.+|.+|+|+.... + .....|..+... . .+..+.+ ..+|+|++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~-~~g~~V~~~~r~~~~~-~--------~~~~~g~~~~~~-~-~~~~~~~~~~~D~vilav 70 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQ-QSLPHTTLIGRHAKTI-T--------YYTVPHAPAQDI-V-VKGYEDVTNTFDVIIIAV 70 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HHCTTCEEEESSCEEE-E--------EESSTTSCCEEE-E-EEEGGGCCSCEEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHH-HCCCeEEEEEeccCcE-E--------EEecCCeeccce-e-cCchHhcCCCCCEEEEeC
Confidence 47999999999999999985 4578999999985321 0 001112111111 1 1333443 8899999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCccc
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~v 277 (328)
|. .++...+ ++.-..+++++++|.+.-|=-.
T Consensus 71 k~-~~~~~~l-~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 71 KT-HQLDAVI-PHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp CG-GGHHHHG-GGHHHHEEEEEEEEECCSSCCC
T ss_pred Cc-cCHHHHH-HHHHHhhCCCCEEEEeccCccc
Confidence 94 3455544 3333446678899998877433
No 228
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.05 E-value=0.0024 Score=59.48 Aligned_cols=104 Identities=14% Similarity=0.172 Sum_probs=60.5
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
++|+|||.|.+|..+|..++ .-|. +|..||+..... +.........+.... .........++ +.++.||+|+++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la-~~g~~~v~L~Di~~~~l-~~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIV-QKNLGDVVLFDIVKNMP-HGKALDTSHTNVMAY-SNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHH-HHHHHHHHTHHHHHT-CCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCHHHH-HHHHHHHHhhhhhcC-CCcEEEECCCH-HHhCCCCEEEEeC
Confidence 58999999999999999975 4466 899999886432 211111111011001 11112222567 7789999999998
Q ss_pred --CCChhh------h-cc------ccHHHH---hcCCCCcEEEEcCC
Q 020301 245 --VLDKTT------Y-HL------INKERL---ATMKKEAILVNCSR 273 (328)
Q Consensus 245 --plt~~t------~-~l------i~~~~~---~~mk~ga~lIN~aR 273 (328)
|..+.- + .+ +-++.+ ....|++++|+++-
T Consensus 81 g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 127 (322)
T 1t2d_A 81 GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN 127 (322)
T ss_dssp SCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 544331 1 11 112222 22348999998844
No 229
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.04 E-value=0.00076 Score=62.29 Aligned_cols=117 Identities=15% Similarity=0.202 Sum_probs=66.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH-HHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell~~aDiV~l~~ 244 (328)
.+++|||.|.||..+|..| . -|.+|.+++|+... .+.. .+.+-.....+.. .....+. ++....+|+|++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L-~-~g~~V~~~~r~~~~-~~~l-~~~G~~~~~~~~~---~~~~~~~~~~~~~~~D~vilav 75 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYL-S-LYHDVTVVTRRQEQ-AAAI-QSEGIRLYKGGEE---FRADCSADTSINSDFDLLVVTV 75 (307)
T ss_dssp CEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHH-HHHH-HHHCEEEEETTEE---EEECCEEESSCCSCCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHH-h-cCCceEEEECCHHH-HHHH-HhCCceEecCCCe---ecccccccccccCCCCEEEEEe
Confidence 5899999999999999997 5 68999999998632 1111 1111111111100 0000111 24567899999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEE
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ga 294 (328)
|. .++...+ +.++.+.++. +|.+.-|=- .++.|.+.+...++.++
T Consensus 76 K~-~~~~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~vl~g 120 (307)
T 3ego_A 76 KQ-HQLQSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSIYVG 120 (307)
T ss_dssp CG-GGHHHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEEEEE
T ss_pred CH-HHHHHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcEEEE
Confidence 93 3444443 3334455666 887766632 23344444444444333
No 230
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.04 E-value=0.037 Score=51.79 Aligned_cols=106 Identities=13% Similarity=0.184 Sum_probs=70.2
Q ss_pred ccCCCEEEEEecC--HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 162 ~l~g~tvgIiG~G--~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
.+.|.+|+++|=| +++.+++..+ ..||++|.+..|..-...++..+...+.++..|. ......++++.+++||+
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~---~v~~~~d~~eav~~aDv 227 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIG-AKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGA---KLTLTEDPKEAVKGVDF 227 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHH-HHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTC---EEEEESCHHHHTTTCSE
T ss_pred CcCCeEEEEecCCccchHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCC---eEEEEeCHHHHhCCCCE
Confidence 5889999999996 9999999986 5899999999885421111111100000111121 12234789999999999
Q ss_pred EEEcCC-C-C------hh-----hhccccHHHHhcC-CCCcEEEEc
Q 020301 240 ISLHPV-L-D------KT-----TYHLINKERLATM-KKEAILVNC 271 (328)
Q Consensus 240 V~l~~p-l-t------~~-----t~~li~~~~~~~m-k~ga~lIN~ 271 (328)
|..-.= . . ++ ...-+|.+.++.+ ||+++|.-+
T Consensus 228 vytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHc 273 (335)
T 1dxh_A 228 VHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHC 273 (335)
T ss_dssp EEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEEC
T ss_pred EEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECC
Confidence 976322 1 0 11 1235799999999 999999877
No 231
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.01 E-value=0.0016 Score=60.55 Aligned_cols=103 Identities=15% Similarity=0.170 Sum_probs=64.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.++||||+|+||+.+++.+.+.-++++. ++|++.... + + .+...+.++++++..+|+|+++.
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~-------~-------~---~gv~~~~d~~~ll~~~DvViiat 66 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD-------T-------K---TPVFDVADVDKHADDVDVLFLCM 66 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS-------S-------S---SCEEEGGGGGGTTTTCSEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHh-------h-------c---CCCceeCCHHHHhcCCCEEEEcC
Confidence 3799999999999999987433378754 778764320 0 0 11223457788888899999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCCcc-c-CH-HHHHHHHHcCC
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPV-I-DE-VALVEHLKQNP 290 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-v-de-~aL~~aL~~g~ 290 (328)
|.... -+.....++.|.-+|...-..+ + +. +.|.++.+++.
T Consensus 67 p~~~h-----~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 67 GSATD-----IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp CTTTH-----HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred CcHHH-----HHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 84322 1233345566766665543332 2 22 45666666544
No 232
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=97.00 E-value=0.0013 Score=64.58 Aligned_cols=128 Identities=13% Similarity=0.267 Sum_probs=75.4
Q ss_pred CCEEEEEecCHH--HHHHHHHHHh--cC-CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 165 GQTVGVIGAGRI--GSAYARMMVE--GF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 165 g~tvgIiG~G~I--G~~vA~~l~~--~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
..+|+|||.|.+ |.++|..+++ ++ |.+|..||+.... .+...+.........+ .+.......++++.++.||+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~-l~~~~~~~~~~l~~~~-~~~~I~~ttD~~eal~dAD~ 80 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEER-LDAILTIAKKYVEEVG-ADLKFEKTMNLDDVIIDADF 80 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHH-HHHHHHHHHHHHHHTT-CCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHH-HHHHHHHHHHHhccCC-CCcEEEEECCHHHHhCCCCE
Confidence 468999999997 5666766542 44 7899999998643 2211111001011111 22233334688888999999
Q ss_pred EEEcCCCC-----------hhhhcccc----------------------------HHHHhcCCCCcEEEEcCCCcccCHH
Q 020301 240 ISLHPVLD-----------KTTYHLIN----------------------------KERLATMKKEAILVNCSRGPVIDEV 280 (328)
Q Consensus 240 V~l~~plt-----------~~t~~li~----------------------------~~~~~~mk~ga~lIN~aRG~~vde~ 280 (328)
|++++|.. +.-.+++. .+.+....|++++||++---=+-..
T Consensus 81 VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~ 160 (480)
T 1obb_A 81 VINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTT 160 (480)
T ss_dssp EEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHH
T ss_pred EEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHH
Confidence 99999741 00011110 1234445689999999876545555
Q ss_pred HHHHHHHcCCccEEE
Q 020301 281 ALVEHLKQNPMFRVG 295 (328)
Q Consensus 281 aL~~aL~~g~i~gaa 295 (328)
++.+ +...++.|.+
T Consensus 161 ~~~k-~p~~rviG~c 174 (480)
T 1obb_A 161 LVTR-TVPIKAVGFC 174 (480)
T ss_dssp HHHH-HSCSEEEEEC
T ss_pred HHHH-CCCCcEEecC
Confidence 6655 5555666663
No 233
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.98 E-value=0.0042 Score=57.66 Aligned_cols=69 Identities=13% Similarity=0.214 Sum_probs=47.8
Q ss_pred CEEEEEecCHHHHHHHHHHHhcC---CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGF---KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~f---g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (328)
.++||||+|.||+..++.+ +.. ++++. ++|+++.. .+++.+.| +.. ..+.+++++++ ..|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l-~~~~~~~~~l~av~d~~~~~-a~~~a~~~-------~~~----~~~~~~~~ll~~~~vD~ 69 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVL-QTLPRSEHQVVAVAARDLSR-AKEFAQKH-------DIP----KAYGSYEELAKDPNVEV 69 (334)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTSCTTTEEEEEEECSSHHH-HHHHHHHH-------TCS----CEESSHHHHHHCTTCCE
T ss_pred cEEEEECchHHHHHHHHHH-HhCCCCCeEEEEEEcCCHHH-HHHHHHHc-------CCC----cccCCHHHHhcCCCCCE
Confidence 3799999999999999986 444 35654 57887643 23333333 211 13579999998 6999
Q ss_pred EEEcCCCC
Q 020301 240 ISLHPVLD 247 (328)
Q Consensus 240 V~l~~plt 247 (328)
|++++|..
T Consensus 70 V~i~tp~~ 77 (334)
T 3ohs_X 70 AYVGTQHP 77 (334)
T ss_dssp EEECCCGG
T ss_pred EEECCCcH
Confidence 99999943
No 234
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.94 E-value=0.053 Score=50.39 Aligned_cols=140 Identities=16% Similarity=0.099 Sum_probs=84.5
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC-HHHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG-RIGSAYARM 183 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G-~IG~~vA~~ 183 (328)
++-.+|+|.|.-+....+. .+++=++.+.+++ | .+.|.+|++||=| ++.++.+..
T Consensus 119 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------------------g-~l~gl~va~vGD~~~va~Sl~~~ 174 (321)
T 1oth_A 119 AKEASIPIINGLSDLYHPI--QILADYLTLQEHY---------------------S-SLKGLTLSWIGDGNNILHSIMMS 174 (321)
T ss_dssp HHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH---------------------S-CCTTCEEEEESCSSHHHHHHHTT
T ss_pred HHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHh---------------------C-CcCCcEEEEECCchhhHHHHHHH
Confidence 3445799999766444333 3333344333321 1 4789999999985 477777777
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC----CCChhh--------h
Q 020301 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP----VLDKTT--------Y 251 (328)
Q Consensus 184 l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~----plt~~t--------~ 251 (328)
+ ..||++|.+..|..-...++..+.-.+.++..|. ......++++.++++|+|..-+ ....+. .
T Consensus 175 ~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~---~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~ 250 (321)
T 1oth_A 175 A-AKFGMHLQAATPKGYEPDASVTKLAEQYAKENGT---KLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQG 250 (321)
T ss_dssp T-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTC---CEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTT
T ss_pred H-HHcCCeEEEECCccccCCHHHHHHHHHHHHHcCC---eEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccC
Confidence 5 5799999999885321111111100000111121 1233578999999999998832 211111 1
Q ss_pred ccccHHHHhcCCCCcEEEEcC
Q 020301 252 HLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 252 ~li~~~~~~~mk~ga~lIN~a 272 (328)
.-+|.+.++.+||+++|.-+.
T Consensus 251 y~v~~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 251 YQVTMKTAKVAASDWTFLHCL 271 (321)
T ss_dssp CCBCHHHHHTSCTTCEEEECS
T ss_pred ceECHHHHhhcCCCCEEECCC
Confidence 346999999999999999883
No 235
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.92 E-value=0.002 Score=56.10 Aligned_cols=94 Identities=16% Similarity=0.135 Sum_probs=55.9
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccC---CHHHH-hhcCCEEEE
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS---SMDEV-LREADVISL 242 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~el-l~~aDiV~l 242 (328)
++.|+|+|.+|+.+|+.| ...|.+|+++|+++... +...+ ..+.... ..... .++++ +.+||+|++
T Consensus 2 ~iiIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~-~~l~~-------~~~~~~i-~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSM-LSRKYGVVIINKDRELC-EEFAK-------KLKATII-HGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECCHHHHHHHHHHH-HHTTCCEEEEESCHHHH-HHHHH-------HSSSEEE-ESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HHHHH-------HcCCeEE-EcCCCCHHHHHhcCcccCCEEEE
Confidence 689999999999999997 57899999999886532 11111 1111100 00112 24443 678999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
++|.... +++-....+.+.+...+|-..
T Consensus 72 ~~~~d~~--n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 72 LTPRDEV--NLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp CCSCHHH--HHHHHHHHHHTSCCCEEEECC
T ss_pred ecCCcHH--HHHHHHHHHHHcCCCeEEEEE
Confidence 9985433 333333444443444455433
No 236
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.91 E-value=0.019 Score=53.07 Aligned_cols=148 Identities=16% Similarity=0.090 Sum_probs=91.0
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC--HHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYAR 182 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G--~IG~~vA~ 182 (328)
++--+|+|.|.-+....+. .+++=++.+.+++ | .+.|.+|+++|=| ++.++++.
T Consensus 112 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g-------------~l~gl~va~vGD~~~rva~Sl~~ 167 (307)
T 2i6u_A 112 ASVATVPVINALSDEFHPC--QVLADLQTIAERK---------G-------------ALRGLRLSYFGDGANNMAHSLLL 167 (307)
T ss_dssp HHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH---------S-------------CCTTCEEEEESCTTSHHHHHHHH
T ss_pred HhhCCCCEEcCCCCCcCcc--HHHHHHHHHHHHh---------C-------------CcCCeEEEEECCCCcCcHHHHHH
Confidence 3445799999765444333 3333334333321 1 4789999999986 99999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE-cCCCC------hh-----h
Q 020301 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL-HPVLD------KT-----T 250 (328)
Q Consensus 183 ~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l-~~plt------~~-----t 250 (328)
.+ ..||++|.+..|..-...++..+...+.++..|. ......+++|.+++||+|.. ..... ++ .
T Consensus 168 ~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~---~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~ 243 (307)
T 2i6u_A 168 GG-VTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGA---SVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFR 243 (307)
T ss_dssp HH-HHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTC---CEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGG
T ss_pred HH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcCC---eEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHh
Confidence 86 5899999999885321111111100000111221 12234789999999999977 33110 11 1
Q ss_pred hccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 251 YHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 251 ~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
..-++++.++.+||+++|.-+. ||.=|+.+
T Consensus 244 ~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 276 (307)
T 2i6u_A 244 PFQLNSRLLALADSDAIVLHCLPAHRGDEITDA 276 (307)
T ss_dssp GGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred hcCCCHHHHhhcCCCcEEECCCCCCCCcccCHh
Confidence 2447899999999999999884 66555544
No 237
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.89 E-value=0.0019 Score=60.83 Aligned_cols=68 Identities=10% Similarity=0.142 Sum_probs=47.2
Q ss_pred CEEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcC--CEEE
Q 020301 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA--DVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~-vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a--DiV~ 241 (328)
.++||||+|.||+. .++.+.+.-++++. ++|+++... ++..+.| + ....+.+++++++.. |+|+
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------~----~~~~~~~~~~ll~~~~vD~V~ 73 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERA-RRVHRFI-------S----DIPVLDNVPAMLNQVPLDAVV 73 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHH-GGGGGTS-------C----SCCEESSHHHHHHHSCCSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHHHHhc-------C----CCcccCCHHHHhcCCCCCEEE
Confidence 47999999999995 88887433378876 779876532 1111111 1 112357999999865 9999
Q ss_pred EcCC
Q 020301 242 LHPV 245 (328)
Q Consensus 242 l~~p 245 (328)
+|+|
T Consensus 74 i~tp 77 (359)
T 3m2t_A 74 MAGP 77 (359)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 9999
No 238
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.87 E-value=0.0024 Score=57.47 Aligned_cols=99 Identities=19% Similarity=0.230 Sum_probs=68.7
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCcEE-EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
-+..+|+++|+|+||+.+++. . ++++ .+|+ . +. +.. +.....+++++++.+|+|+
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-~-k~----------------gel--gv~a~~d~d~lla~pD~VV 65 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-R-IS----------------KDI--PGVVRLDEFQVPSDVSTVV 65 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH---S-CCSEEEEEC-S-SC----------------CCC--SSSEECSSCCCCTTCCEEE
T ss_pred cccceEEEECcCHHHHHHHhc---C-CcEEEEEEe-c-cc----------------ccc--CceeeCCHHHHhhCCCEEE
Confidence 456799999999999999996 3 6765 4555 1 10 111 2223467999999999998
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCH---HHHHHHHHcCC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNP 290 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde---~aL~~aL~~g~ 290 (328)
=|.+ . .-+.+....-++.|.-+|-+|-|.+.|. +.|.++-++|.
T Consensus 66 e~A~--~---~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg 112 (253)
T 1j5p_A 66 ECAS--P---EAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSP 112 (253)
T ss_dssp ECSC--H---HHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCS
T ss_pred ECCC--H---HHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCC
Confidence 8765 2 2344445667889999999999999887 45666666554
No 239
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.87 E-value=0.0031 Score=59.34 Aligned_cols=74 Identities=15% Similarity=0.265 Sum_probs=51.4
Q ss_pred cCCCEEEEEecCHHHHHHHHHHH-hcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CC
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--AD 238 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~-~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aD 238 (328)
..-.++||||+|.||+..++.++ +.-++++. ++|+++... ++..+.| +. ....+.+++++++. .|
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~a~~~-------g~---~~~~~~~~~~ll~~~~~D 89 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRA-QAALDKY-------AI---EAKDYNDYHDLINDKDVE 89 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHH-HHHHHHH-------TC---CCEEESSHHHHHHCTTCC
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHH-HHHHHHh-------CC---CCeeeCCHHHHhcCCCCC
Confidence 33458999999999999999874 23478876 689886532 2222322 11 12245799999984 89
Q ss_pred EEEEcCCCC
Q 020301 239 VISLHPVLD 247 (328)
Q Consensus 239 iV~l~~plt 247 (328)
+|++|.|..
T Consensus 90 ~V~i~tp~~ 98 (357)
T 3ec7_A 90 VVIITASNE 98 (357)
T ss_dssp EEEECSCGG
T ss_pred EEEEcCCcH
Confidence 999999943
No 240
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.86 E-value=0.0025 Score=61.76 Aligned_cols=73 Identities=11% Similarity=0.119 Sum_probs=48.2
Q ss_pred CEEEEEecCHHHH-HHHHHHHhcCCcEE-EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEE
Q 020301 166 QTVGVIGAGRIGS-AYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~-~vA~~l~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (328)
.++||||+|.||+ .+++.+.+.-++++ .++|++... .+++.+.| +........+.+++++++ +.|+|+
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~-~~~~a~~~-------g~~~~~~~~~~~~~~ll~~~~vD~V~ 155 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEK-AKIVAAEY-------GVDPRKIYDYSNFDKIAKDPKIDAVY 155 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHH-HHHHHHHT-------TCCGGGEECSSSGGGGGGCTTCCEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHH-HHHHHHHh-------CCCcccccccCCHHHHhcCCCCCEEE
Confidence 4899999999997 88888633236776 478887643 22222222 221111123578999997 799999
Q ss_pred EcCCC
Q 020301 242 LHPVL 246 (328)
Q Consensus 242 l~~pl 246 (328)
+++|.
T Consensus 156 iatp~ 160 (433)
T 1h6d_A 156 IILPN 160 (433)
T ss_dssp ECSCG
T ss_pred EcCCc
Confidence 99993
No 241
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.86 E-value=0.0031 Score=58.53 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=61.2
Q ss_pred CCEEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
-++|+|||.|.||..+|..++. ++.-+|..||+... ..+.............+ ...... .+..+.++.||+|+++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~-~~~~~~~dl~~~~~~~~-~~~~i~--~~~~~al~~aDvViia 81 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANES-KAIGDAMDFNHGKVFAP-KPVDIW--HGDYDDCRDADLVVIC 81 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH-HHHHHHHHHHHHTTSSS-SCCEEE--ECCGGGTTTCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcc-hHHHHHhhHHHHhhhcC-CCeEEE--cCcHHHhCCCCEEEEc
Confidence 3689999999999999988742 23348999999864 22221111111000000 011111 2335678999999999
Q ss_pred CCCChhhhcc-----c------cH---HHHhcCCCCcEEEEcCCCcccCHH
Q 020301 244 PVLDKTTYHL-----I------NK---ERLATMKKEAILVNCSRGPVIDEV 280 (328)
Q Consensus 244 ~plt~~t~~l-----i------~~---~~~~~mk~ga~lIN~aRG~~vde~ 280 (328)
.|... ..++ + -. +.+....|++++++.+- .+|.-
T Consensus 82 ~~~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN--Pv~~~ 129 (316)
T 1ldn_A 82 AGANQ-KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN--PVDIL 129 (316)
T ss_dssp CSCCC-CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS--SHHHH
T ss_pred CCCCC-CCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC--chHHH
Confidence 77432 1111 1 01 12233358899999854 45443
No 242
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.85 E-value=0.075 Score=50.08 Aligned_cols=139 Identities=17% Similarity=0.165 Sum_probs=85.7
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC--HHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYAR 182 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G--~IG~~vA~ 182 (328)
++--+|+|.|.-+....+. .+++=++.+.+++ | .+.|.+|+++|=| ++..+++.
T Consensus 140 A~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~~---------------------g-~l~gl~va~vGD~~~rva~Sl~~ 195 (359)
T 2w37_A 140 ARDSGVPVWNGLTDEWHPT--QMLADFMTVKENF---------------------G-KLQGLTLTFMGDGRNNVANSLLV 195 (359)
T ss_dssp HHHSSSCEEEEECSSCCHH--HHHHHHHHHHHHH---------------------S-CCTTCEEEEESCTTSHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcc--HHHHHHHHHHHHh---------------------C-CcCCeEEEEECCCccchHHHHHH
Confidence 4455799999655433332 3333344333321 1 4789999999996 99999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC-CC-----hh-----hh
Q 020301 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV-LD-----KT-----TY 251 (328)
Q Consensus 183 ~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p-lt-----~~-----t~ 251 (328)
.+ ..||++|.+..|..-...++..+...+.++..|. ......+++|.++.||+|..-.= .. ++ ..
T Consensus 196 ~~-~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~---~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~ 271 (359)
T 2w37_A 196 TG-AILGVNIHIVAPKALFPTEETQNIAKGFAEKSGA---KLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTP 271 (359)
T ss_dssp HH-HHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTC---CEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGG
T ss_pred HH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcCC---eEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhc
Confidence 86 5799999999885321111111100000111121 12234789999999999977322 11 11 12
Q ss_pred ccccHHHHhcCC---CCcEEEEc
Q 020301 252 HLINKERLATMK---KEAILVNC 271 (328)
Q Consensus 252 ~li~~~~~~~mk---~ga~lIN~ 271 (328)
.-++.+.++.+| |+++|.-+
T Consensus 272 y~v~~ell~~ak~~~~dai~MHc 294 (359)
T 2w37_A 272 YQVNMEAMKKTGTPDDQLIFMHC 294 (359)
T ss_dssp GCBCHHHHHTTCCCGGGCEEEEC
T ss_pred cccCHHHHHhhCCCCCCEEEECC
Confidence 447899999999 99999887
No 243
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.83 E-value=0.0014 Score=63.37 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=61.5
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC---HHHH-hhcCCEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV 240 (328)
+.++.|+|+|++|+.+|+.| +..|.+|++.|.++... +. ++..|.... ....++ |+++ +.+||+|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L-~~~g~~vvvId~d~~~v-~~--------~~~~g~~vi-~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLL-LSSGVKMVVLDHDPDHI-ET--------LRKFGMKVF-YGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEECCHHHH-HH--------HHHTTCCCE-ESCTTCHHHHHHTTTTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHHH-HH--------HHhCCCeEE-EcCCCCHHHHHhcCCCccCEE
Confidence 34699999999999999997 68899999999987542 11 122232211 111223 3333 6789999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
+++++... .++.-....+.+.|...+|--++
T Consensus 73 iv~~~~~~--~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 73 INAIDDPQ--TNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp EECCSSHH--HHHHHHHHHHHHCTTCEEEEEES
T ss_pred EECCCChH--HHHHHHHHHHHhCCCCeEEEEEC
Confidence 99998533 33333455666667755555444
No 244
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.83 E-value=0.043 Score=50.60 Aligned_cols=132 Identities=23% Similarity=0.288 Sum_probs=85.6
Q ss_pred HHhCCceEecCC-CCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC---HHHHHH
Q 020301 105 ANKYGIAVGNTP-GVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG---RIGSAY 180 (328)
Q Consensus 105 ~~~~gI~v~n~p-~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G---~IG~~v 180 (328)
++--+|+|.|.- |....+. .+++=++.+.+++ | .+.|.+|+++|=| ++.++.
T Consensus 110 a~~~~vPVINagdg~~~HPt--QaLaDl~Ti~e~~---------------------g-~l~glkva~vGD~~~~rva~Sl 165 (304)
T 3r7f_A 110 VSQVNIPILNAGDGCGQHPT--QSLLDLMTIYEEF---------------------N-TFKGLTVSIHGDIKHSRVARSN 165 (304)
T ss_dssp HHHCSSCEEESCCTTSCCHH--HHHHHHHHHHHHH---------------------S-CCTTCEEEEESCCTTCHHHHHH
T ss_pred HHhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHHh---------------------C-CCCCCEEEEEcCCCCcchHHHH
Confidence 445679999985 4444333 2233333333221 1 4789999999975 799999
Q ss_pred HHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCCh---------h--
Q 020301 181 ARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK---------T-- 249 (328)
Q Consensus 181 A~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~---------~-- 249 (328)
+..+ ..||++|.+..|..-.. + ....+ ...+++|.++.||+|..-.--.+ +
T Consensus 166 ~~~~-~~~G~~v~~~~P~~~~~-~--------------~~~~g--~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~ 227 (304)
T 3r7f_A 166 AEVL-TRLGARVLFSGPSEWQD-E--------------ENTFG--TYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYL 227 (304)
T ss_dssp HHHH-HHTTCEEEEESCGGGSC-T--------------TCSSC--EECCHHHHHHHCSEEEECCCCTTTCCSSCCSTTHH
T ss_pred HHHH-HHcCCEEEEECCCccCc-c--------------hhhcC--ccCCHHHHhCCCCEEEeccchhhccccchhHHHHh
Confidence 9986 58999999988742110 0 00111 23689999999999977421111 1
Q ss_pred hhccccHHHHhcCCCCcEEEEcC---CCcccC
Q 020301 250 TYHLINKERLATMKKEAILVNCS---RGPVID 278 (328)
Q Consensus 250 t~~li~~~~~~~mk~ga~lIN~a---RG~~vd 278 (328)
...-++.+.++.+|++++|.-+. ||.=|+
T Consensus 228 ~~y~v~~~~l~~a~~~ai~mHclP~~Rg~EI~ 259 (304)
T 3r7f_A 228 NKYGLTVERAERMKRHAIIMHPAPVNRGVEID 259 (304)
T ss_dssp HHHSBCHHHHTTSCTTCEEECCSCCCBTTTBC
T ss_pred CCCccCHHHHhhcCCCCEEECCCCCCCCceeC
Confidence 12347999999999999998874 665443
No 245
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.82 E-value=0.0024 Score=62.63 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=50.6
Q ss_pred cccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcc--ccccCCHHHHhhc
Q 020301 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT--WKRASSMDEVLRE 236 (328)
Q Consensus 159 ~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ell~~ 236 (328)
.+..+.+++++|+|.|.+|+.+++.|++..|.+|.+++|+.... ++..+ ..+..... .....++.++++.
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka-~~la~-------~~~~~~~~~D~~d~~~l~~~l~~ 88 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANA-QALAK-------PSGSKAISLDVTDDSALDKVLAD 88 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHH-HHHHG-------GGTCEEEECCTTCHHHHHHHHHT
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHH-HHHHH-------hcCCcEEEEecCCHHHHHHHHcC
Confidence 34578899999999999999999998543478999999986432 21111 11111000 0111256678899
Q ss_pred CCEEEEcCCCC
Q 020301 237 ADVISLHPVLD 247 (328)
Q Consensus 237 aDiV~l~~plt 247 (328)
+|+|+.++|..
T Consensus 89 ~DvVIn~tp~~ 99 (467)
T 2axq_A 89 NDVVISLIPYT 99 (467)
T ss_dssp SSEEEECSCGG
T ss_pred CCEEEECCchh
Confidence 99999999954
No 246
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.82 E-value=0.0015 Score=61.10 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=46.2
Q ss_pred CEEEEEecCHHHHH-HHH-HHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEE
Q 020301 166 QTVGVIGAGRIGSA-YAR-MMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (328)
Q Consensus 166 ~tvgIiG~G~IG~~-vA~-~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (328)
.++||||+|.||+. .++ .+.+.-++++. ++|+++... + ....+ .+...+.+++++++. .|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~-~-~~~~~-----------~~~~~~~~~~~ll~~~~~D~V 69 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-E-QAPIY-----------SHIHFTSDLDEVLNDPDVKLV 69 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGG-G-GSGGG-----------TTCEEESCTHHHHTCTTEEEE
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHH-H-HHHhc-----------CCCceECCHHHHhcCCCCCEE
Confidence 37999999999996 455 33233478877 788876532 1 11111 112345799999987 8999
Q ss_pred EEcCCCC
Q 020301 241 SLHPVLD 247 (328)
Q Consensus 241 ~l~~plt 247 (328)
++++|..
T Consensus 70 ~i~tp~~ 76 (345)
T 3f4l_A 70 VVCTHAD 76 (345)
T ss_dssp EECSCGG
T ss_pred EEcCChH
Confidence 9999943
No 247
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.80 E-value=0.027 Score=51.89 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=70.7
Q ss_pred ccCCCEEEEEec---CHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcC
Q 020301 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (328)
Q Consensus 162 ~l~g~tvgIiG~---G~IG~~vA~~l~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (328)
.+.|.+|+++|= |++.++++..+ ..| |++|.+..|..-...+.. ++..| .......+++|.+++|
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~-------~~~~g---~~~~~~~d~~eav~~a 214 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRIL-TRFRPKLVYLISPQLLRARKEI-------LDELN---YPVKEVENPFEVINEV 214 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHG-GGSCCSEEEEECCGGGCCCHHH-------HTTCC---SCEEEESCGGGTGGGC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCchhcCCHHH-------HHHcC---CeEEEeCCHHHHhcCC
Confidence 478999999998 59999999986 689 999999988532111111 11112 1122346899999999
Q ss_pred CEEEEcCCCCh------hh-----hccccHHHHhcCCCCcEEEEcC-CCc
Q 020301 238 DVISLHPVLDK------TT-----YHLINKERLATMKKEAILVNCS-RGP 275 (328)
Q Consensus 238 DiV~l~~plt~------~t-----~~li~~~~~~~mk~ga~lIN~a-RG~ 275 (328)
|+|..-.=-.+ +. ..-+|.+.++.+||+++|.-+. ||.
T Consensus 215 Dvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lPrg~ 264 (299)
T 1pg5_A 215 DVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLPRVN 264 (299)
T ss_dssp SEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSCCSS
T ss_pred CEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCCCCC
Confidence 99965443321 11 2447899999999999988773 443
No 248
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.80 E-value=0.0026 Score=58.40 Aligned_cols=106 Identities=10% Similarity=0.073 Sum_probs=65.4
Q ss_pred CCEEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEE
Q 020301 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (328)
Q Consensus 165 g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (328)
..+++|+|+ |++|+..++.+ +.+|++++ .+||.... ....+...+.+++++.. ..|++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l-~~~g~~~V~~V~p~~~g-----------------~~~~G~~vy~sl~el~~~~~~D~v 68 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQA-IAYGTKMVGGVTPGKGG-----------------TTHLGLPVFNTVREAVAATGATAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHHCCCEE
T ss_pred CCEEEEECCCChHHHHHHHHH-HHCCCeEEEEeCCCccc-----------------ceeCCeeccCCHHHHhhcCCCCEE
Confidence 357999999 99999999987 45688844 55653210 00112234578999998 89999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCcc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMF 292 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~aL~~g~i~ 292 (328)
++++|. +....++ ++.+++=+ . .+|..+-|-- -+.+.|.++.++..+.
T Consensus 69 iI~tP~-~~~~~~~-~ea~~~Gi-~-~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 69 VIYVPA-PFCKDSI-LEAIDAGI-K-LIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp EECCCG-GGHHHHH-HHHHHTTC-S-EEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred EEecCH-HHHHHHH-HHHHHCCC-C-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 999993 2333333 33443222 2 2344544432 2445888888775543
No 249
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.76 E-value=0.0022 Score=57.43 Aligned_cols=81 Identities=17% Similarity=0.171 Sum_probs=51.9
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.+|+|+|+|+||+.+++.+...-+ ++.+ +|+..... .+...+.++++++ .+|+|+-+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~~-------------------~gv~v~~dl~~l~-~~DVvIDft 62 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKAT-------------------TPYQQYQHIADVK-GADVAIDFS 62 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC---------------------CCSCBCSCTTTCT-TCSEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCcccc-------------------CCCceeCCHHHHh-CCCEEEEeC
Confidence 479999999999999998743334 7654 78765320 1122346888888 999987443
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
+ ...+.. .+. ++.|.-+|....|
T Consensus 63 ~-p~a~~~-----~~~-l~~g~~vVigTTG 85 (243)
T 3qy9_A 63 N-PNLLFP-----LLD-EDFHLPLVVATTG 85 (243)
T ss_dssp C-HHHHHH-----HHT-SCCCCCEEECCCS
T ss_pred C-hHHHHH-----HHH-HhcCCceEeCCCC
Confidence 3 122222 233 6777767766666
No 250
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.75 E-value=0.018 Score=55.80 Aligned_cols=116 Identities=16% Similarity=0.254 Sum_probs=72.6
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCC---------chhHHHHHHhhhhhhhhcCCCCCccccccCCH
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (328)
.++.|+|+.|.|+|++|+.+|+.| ...|++|+ +.|.+ ....+.++.+.++ ...........+.
T Consensus 231 ~~l~g~~vaVqGfGnVG~~~a~~L-~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g------~i~~y~~a~~i~~ 303 (440)
T 3aog_A 231 LQVEGARVAIQGFGNVGNAAARAF-HDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFG------GVRGYPKAEPLPA 303 (440)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTS------SSTTCTTSEECCH
T ss_pred CCccCCEEEEeccCHHHHHHHHHH-HHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcC------CcccCCCceEcCc
Confidence 468999999999999999999997 58899998 44442 1122222222111 1111100122355
Q ss_pred HHHhh-cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 231 DEVLR-EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 231 ~ell~-~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
++++. .||+++-|.. .+.|+.+...+++ -.+++-.+-+++- .+|- +.|.+..|
T Consensus 304 ~ei~~~~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~eA~-~iL~~~GI 357 (440)
T 3aog_A 304 ADFWGLPVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PAAD-DILLEKGV 357 (440)
T ss_dssp HHHTTCCCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHHH-HHHHHHTC
T ss_pred hhhhcCCCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HHHH-HHHHHCCC
Confidence 66654 7999998855 5667777777774 6688888888864 4443 44444434
No 251
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.75 E-value=0.0036 Score=54.96 Aligned_cols=90 Identities=11% Similarity=0.177 Sum_probs=55.7
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC---HHHH-hhcCCEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV 240 (328)
.+++.|+|+|.+|+.+|+.| ...|. |+++|+++... +. +. .+.... .....+ |+++ +.+||.|
T Consensus 9 ~~~viI~G~G~~G~~la~~L-~~~g~-v~vid~~~~~~-~~--------~~-~~~~~i-~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 9 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRK-KV--------LR-SGANFV-HGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHS-TTSEE-EEEESCGGGHH-HH--------HH-TTCEEE-ESCTTCHHHHHHTTCTTCSEE
T ss_pred CCEEEEECCChHHHHHHHHH-HhCCe-EEEEECCHHHH-HH--------Hh-cCCeEE-EcCCCCHHHHHhcCcchhcEE
Confidence 45799999999999999997 67888 99999876532 11 11 121111 111223 3334 7889999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEE
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILV 269 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lI 269 (328)
++++|.. ..++.-....+.+.++..+|
T Consensus 76 i~~~~~d--~~n~~~~~~a~~~~~~~~ii 102 (234)
T 2aef_A 76 IVDLESD--SETIHCILGIRKIDESVRII 102 (234)
T ss_dssp EECCSCH--HHHHHHHHHHHHHCSSSEEE
T ss_pred EEcCCCc--HHHHHHHHHHHHHCCCCeEE
Confidence 9998843 23333344555666663443
No 252
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.74 E-value=0.21 Score=46.12 Aligned_cols=115 Identities=15% Similarity=0.164 Sum_probs=73.3
Q ss_pred ccC-CCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 162 LLK-GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 162 ~l~-g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
.+. |++|+++|= +++.++.+..+ ..||++|.+..|..-...+...+.-.+.++..| .......++++.++.||+
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~~~~~~d~~eav~~aDv 217 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITA-AILGFEISIAMPKNYKISPEIWEFAMKQALISG---AKISLGYDKFEALKDKDV 217 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CEEEEESCHHHHHTTCSE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHHHHHcC---CeEEEEcCHHHHhcCCCE
Confidence 477 999999996 56788888876 579999999987532111111110000011112 122334699999999999
Q ss_pred EEEcC--CCCh--h--------hhccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 240 ISLHP--VLDK--T--------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 240 V~l~~--plt~--~--------t~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
|..-. .... + ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 218 vyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 218 VITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp EEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 97654 1111 1 12347999999999999999874 77666654
No 253
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.71 E-value=0.022 Score=53.81 Aligned_cols=140 Identities=16% Similarity=0.156 Sum_probs=85.3
Q ss_pred HHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC--HHHHHHH
Q 020301 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYA 181 (328)
Q Consensus 104 ~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G--~IG~~vA 181 (328)
.|+--+|+|.|.-+....+. .+++=++.+.+++ | .+.|++|++||=| ++..+++
T Consensus 143 lA~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~~---------------------G-~l~glkva~vGD~~nnva~Sl~ 198 (365)
T 4amu_A 143 LVKYSGVPVWNGLTDDEHPT--QIIADFMTMKEKF---------------------G-NLKNKKIVFIGDYKNNVGVSTM 198 (365)
T ss_dssp HHHHHCSCEEEEECSSCCHH--HHHHHHHHHHHHH---------------------S-SCTTCEEEEESSTTSHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh---------------------C-CCCCCEEEEECCCCcchHHHHH
Confidence 34556899999755433332 2333333333221 1 3789999999988 7888999
Q ss_pred HHHHhcCCcEEEEEcCCchhH--HHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC--CCCh--h---h--
Q 020301 182 RMMVEGFKMNLIYYDLYQATR--LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP--VLDK--T---T-- 250 (328)
Q Consensus 182 ~~l~~~fg~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~--plt~--~---t-- 250 (328)
..+ ..||++|.+..|..-.. .++..+...+.++..| .......++++.++.||+|..-+ .... + .
T Consensus 199 ~~~-~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g---~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~ 274 (365)
T 4amu_A 199 IGA-AFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNG---GSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRI 274 (365)
T ss_dssp HHH-HHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHS---CEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHH
T ss_pred HHH-HHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcC---CEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHH
Confidence 886 58999999998853221 1121110000111112 11223469999999999998632 2221 1 0
Q ss_pred ----hccccHHHHhcCCCCcEEEEc
Q 020301 251 ----YHLINKERLATMKKEAILVNC 271 (328)
Q Consensus 251 ----~~li~~~~~~~mk~ga~lIN~ 271 (328)
.--++.+.++.+||+++|.=+
T Consensus 275 ~~~~~y~vt~ell~~a~~dai~MHc 299 (365)
T 4amu_A 275 GELKNFQVDMNMIKAAKNDVIFLHC 299 (365)
T ss_dssp HHHTTCCBCHHHHHHSCTTCEEEEC
T ss_pred HHhcccccCHHHHHhcCCCcEEECC
Confidence 134799999999999999877
No 254
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.71 E-value=0.21 Score=46.44 Aligned_cols=115 Identities=17% Similarity=0.125 Sum_probs=72.1
Q ss_pred ccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
.+.|.+|++||= +++.++.+..+ ..||++|.+..|..-...+...+.-.+.++..| .......+++|.+++||+|
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~eav~~aDvv 229 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGC-AKVGMSIAVATPEGFTPDPAVSARASEIAGRTG---AEVQILRDPFEAARGAHIL 229 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHH-HHcCCEEEEECCCcccCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhcCCCEE
Confidence 478999999996 57888888876 579999999887532111111110000001112 1122346899999999999
Q ss_pred EEcCCCCh----h--------hhccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 241 SLHPVLDK----T--------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 241 ~l~~plt~----~--------t~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
..-.=-.. + ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 230 yt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~e 284 (323)
T 3gd5_A 230 YTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDE 284 (323)
T ss_dssp EECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred EEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCHH
Confidence 65431110 0 11347999999999999998873 77656544
No 255
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.70 E-value=0.007 Score=62.59 Aligned_cols=147 Identities=19% Similarity=0.206 Sum_probs=92.6
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHH--HHHh-hhh---hhhhcCCC--CCccccccCCHHHHhhcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE--KFVT-AYG---QFLKANGE--QPVTWKRASSMDEVLREA 237 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~--~~~~-~~~---~~~~~~~~--~~~~~~~~~~l~ell~~a 237 (328)
++|||||.|.||+.+|..++ ..|++|+.+|+++..... +... .+. ........ .........++++ ++.|
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a-~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~a 394 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE-LSTV 394 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGG-GGSC
T ss_pred cEEEEEcccHHHHHHHHHHH-hCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHH-HhhC
Confidence 69999999999999999975 779999999998753211 1110 000 00011111 1111122334444 7899
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEEEEeCCCCCCCCCCCcccCCCeEE
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIV 317 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvil 317 (328)
|+|+=++|-+-+.+.-+-++.=+.++++++|-..+.+ +.-..|.++++. .=.-.++=.|.+-| .-||.+ ||-
T Consensus 395 DlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~~-p~r~ig~HFfnP~~--~m~LVE---vi~ 466 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDR-PQLVIGTHFFSPAH--VMRLLE---VIP 466 (742)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEECCSSTT--TCCEEE---EEE
T ss_pred CEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcCC-ccccccccccCCCC--CCceEE---Eec
Confidence 9999999988888877767777779999988765444 566677777653 44556666664432 223433 455
Q ss_pred cCCCC
Q 020301 318 VPHIA 322 (328)
Q Consensus 318 TPHia 322 (328)
+|+++
T Consensus 467 g~~Ts 471 (742)
T 3zwc_A 467 SRYSS 471 (742)
T ss_dssp CSSCC
T ss_pred CCCCC
Confidence 55543
No 256
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.66 E-value=0.01 Score=54.63 Aligned_cols=125 Identities=18% Similarity=0.263 Sum_probs=71.3
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
+|+|||.|.+|..+|..|+ ..|. +|..||+.+........+ .......-. .+.......+ .+.++.||+|+++.
T Consensus 2 kI~ViGaG~vG~~la~~l~-~~~~~~~v~L~D~~~~~~~g~~~d-l~~~~~~~~-~~~~i~~t~d-~~a~~~aDiVViaa 77 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCL-LNLDVDEIALVDIAEDLAVGEAMD-LAHAAAGID-KYPKIVGGAD-YSLLKGSEIIVVTA 77 (294)
T ss_dssp EEEEECCSHHHHHHHHHHH-HHSCCSEEEEECSSHHHHHHHHHH-HHHHHHTTT-CCCEEEEESC-GGGGTTCSEEEECC
T ss_pred EEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECChHHHHHHHHH-HHhhhhhcC-CCCEEEEeCC-HHHhCCCCEEEECC
Confidence 7999999999999999874 4455 999999987542111111 000000000 1111221235 78899999999997
Q ss_pred CCCh---hhh-ccc--cH-------HHHhcCCCCcEEEEcCCCcccCHHHHHHHHH----cCCccEEE--Ee
Q 020301 245 VLDK---TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVALVEHLK----QNPMFRVG--LD 297 (328)
Q Consensus 245 plt~---~t~-~li--~~-------~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~----~g~i~gaa--lD 297 (328)
+... +|+ .++ |. +.+.+..|++++++++ ..+|.-..+-.=. ..++.|.+ ||
T Consensus 78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 6321 111 111 11 2345567899999997 5666543332111 24566664 55
No 257
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.65 E-value=0.0044 Score=58.46 Aligned_cols=70 Identities=21% Similarity=0.227 Sum_probs=47.1
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcc--ccccCCHHHHhhcCCEEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT--WKRASSMDEVLREADVISL 242 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ell~~aDiV~l 242 (328)
.++|+|+|.|.+|+.+|+.|+ . ..+|.+.|++.... ++. .. ...... .....++.++++++|+|+.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~-~-~~~v~~~~~~~~~~-~~~-~~--------~~~~~~~d~~d~~~l~~~~~~~DvVi~ 83 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLK-D-EFDVYIGDVNNENL-EKV-KE--------FATPLKVDASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHT-T-TSEEEEEESCHHHH-HHH-TT--------TSEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEECCCHHHHHHHHHHh-c-CCCeEEEEcCHHHH-HHH-hc--------cCCcEEEecCCHHHHHHHHhCCCEEEE
Confidence 347999999999999999974 3 46888889876432 111 00 111111 1122457788999999999
Q ss_pred cCCC
Q 020301 243 HPVL 246 (328)
Q Consensus 243 ~~pl 246 (328)
++|.
T Consensus 84 ~~p~ 87 (365)
T 3abi_A 84 ALPG 87 (365)
T ss_dssp CCCG
T ss_pred ecCC
Confidence 9994
No 258
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.64 E-value=0.0062 Score=56.73 Aligned_cols=68 Identities=12% Similarity=0.168 Sum_probs=47.0
Q ss_pred EEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEEEE
Q 020301 167 TVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVISL 242 (328)
Q Consensus 167 tvgIiG~G~IG~~-vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~l 242 (328)
++||||+|.||+. .+..+.+.=+++|. ++|+++.. .+++.+.|+ .. ..+.+++++|+. .|+|++
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~-a~~~a~~~g-------~~----~~y~d~~ell~~~~iDaV~I 92 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTR-AREMADRFS-------VP----HAFGSYEEMLASDVIDAVYI 92 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHH-HHHHHHHHT-------CS----EEESSHHHHHHCSSCSEEEE
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHHHHHcC-------CC----eeeCCHHHHhcCCCCCEEEE
Confidence 7999999999986 46665333478877 57887643 233333332 11 235799999965 799999
Q ss_pred cCCC
Q 020301 243 HPVL 246 (328)
Q Consensus 243 ~~pl 246 (328)
+.|.
T Consensus 93 ~tP~ 96 (350)
T 4had_A 93 PLPT 96 (350)
T ss_dssp CSCG
T ss_pred eCCC
Confidence 9993
No 259
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.63 E-value=0.0059 Score=57.05 Aligned_cols=110 Identities=19% Similarity=0.225 Sum_probs=62.0
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
-.+++|+|||.|.||+.+|..++ ..|. ++..+|+.... .+...........- ..... ...+..+.++.||+|
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~l~D~~~~k-~~g~a~DL~~~~~~--~~~~~--i~~~~~~a~~~aDiV 80 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMV-LQGIAQEIGIVDIFKDK-TKGDAIDLEDALPF--TSPKK--IYSAEYSDAKDADLV 80 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHH-HHHHHHHHHTTGGG--SCCCE--EEECCGGGGTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHH-HHHHHhhHhhhhhh--cCCcE--EEECcHHHhcCCCEE
Confidence 35678999999999999999874 3344 89999997542 22111111000000 00111 112345678999999
Q ss_pred EEcCCCC--h-hhh-ccc--c-------HHHHhcCCCCcEEEEcCCCcccCHH
Q 020301 241 SLHPVLD--K-TTY-HLI--N-------KERLATMKKEAILVNCSRGPVIDEV 280 (328)
Q Consensus 241 ~l~~plt--~-~t~-~li--~-------~~~~~~mk~ga~lIN~aRG~~vde~ 280 (328)
+++.... | +|+ .++ | .+.+.+..|++++++++ ..+|.-
T Consensus 81 vi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvdi~ 131 (326)
T 3vku_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDIL 131 (326)
T ss_dssp EECCCCC----------------CHHHHHHHHHTTTCCSEEEECS--SSHHHH
T ss_pred EECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchHHH
Confidence 9987532 1 122 222 1 12344456899999996 455543
No 260
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.60 E-value=0.012 Score=57.28 Aligned_cols=104 Identities=15% Similarity=0.203 Sum_probs=71.9
Q ss_pred ccccCCCEEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC
Q 020301 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (328)
Q Consensus 160 ~~~l~g~tvgIiG~G----------~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (328)
+..+.|++|+|+|+. .-...+++.| ...|++|.+|||...+... ..| . ......+
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L-~~~g~~v~~~DP~~~~~~~---~~~---------~--~~~~~~~ 381 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAAL-QDAGATVKAYDPEGVEQAS---KML---------T--DVEFVEN 381 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHH-HHTSCEEEEECSSCHHHHG---GGC---------S--SCCBCSC
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCCHhHH---Hhc---------C--CceEecC
Confidence 346899999999997 6678999997 6899999999998743211 111 0 1223468
Q ss_pred HHHHhhcCCEEEEcCCCChhhhccccHHHH-hcCCCCcEEEEcCCCcccCHHHHH
Q 020301 230 MDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEVALV 283 (328)
Q Consensus 230 l~ell~~aDiV~l~~plt~~t~~li~~~~~-~~mk~ga~lIN~aRG~~vde~aL~ 283 (328)
+++.++.||.|+++.+ -++.+. ++-+.+ +.|+ +.+++++ |+ +.|.+.+.
T Consensus 382 ~~~~~~~ad~vvi~t~-~~~f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~~ 431 (446)
T 4a7p_A 382 PYAAADGADALVIVTE-WDAFRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAELE 431 (446)
T ss_dssp HHHHHTTBSEEEECSC-CTTTTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHHH
T ss_pred hhHHhcCCCEEEEeeC-CHHhhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHHH
Confidence 8999999999999977 234444 455544 4565 5678886 54 56766553
No 261
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.60 E-value=0.012 Score=54.68 Aligned_cols=114 Identities=20% Similarity=0.247 Sum_probs=64.0
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc-hhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
..++|+|||.|.+|..+|..++ ..|. +|..||+.+ ....+.............. .........+ .+.++.||+|+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~-~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~-~~~~i~~t~d-~~a~~~aDvVI 83 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLA-QKELADVVLVDIPQLENPTKGKALDMLEASPVQG-FDANIIGTSD-YADTADSDVVV 83 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHT-CCCCEEEESC-GGGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeccchHHHHHHhhhhHHHhhhhcc-CCCEEEEcCC-HHHhCCCCEEE
Confidence 4678999999999999999874 5677 999999984 2222221111100000000 0011111123 45689999999
Q ss_pred EcCCC--Ch-hhh-ccc--c----HH---HHhcCCCCcEEEEcCCCcccCHHHH
Q 020301 242 LHPVL--DK-TTY-HLI--N----KE---RLATMKKEAILVNCSRGPVIDEVAL 282 (328)
Q Consensus 242 l~~pl--t~-~t~-~li--~----~~---~~~~mk~ga~lIN~aRG~~vde~aL 282 (328)
++... .| +|+ .++ | ++ .+....|++++++++ ..+|.-..
T Consensus 84 iaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs--NPvd~~t~ 135 (315)
T 3tl2_A 84 ITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT--NPVDAMTY 135 (315)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHHH
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC--ChHHHHHH
Confidence 99742 22 111 122 1 11 233346899999997 44554433
No 262
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.58 E-value=0.014 Score=53.62 Aligned_cols=105 Identities=16% Similarity=0.187 Sum_probs=59.4
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
..+|+|||.|.+|..+|..|+ .-|. +|..+|++.........+ ......-.+ ........+. +.++.||+|++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~-~~g~~~~V~l~d~~~~~~~~~~~~-~~~~~~~~~--~~~v~~~~~~-~~~~~aD~Vii 81 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAA-QRGIAREIVLEDIAKERVEAEVLD-MQHGSSFYP--TVSIDGSDDP-EICRDADMVVI 81 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSSHHHHHHHHHH-HHHTGGGST--TCEEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChhHHHHHHHH-HHhhhhhcC--CeEEEeCCCH-HHhCCCCEEEE
Confidence 468999999999999999874 5577 999999986322100011 000000000 1111111243 46789999999
Q ss_pred cCCCChhhhc------------ccc--HHHHhcCCCCcEEEEcCCCc
Q 020301 243 HPVLDKTTYH------------LIN--KERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 243 ~~plt~~t~~------------li~--~~~~~~mk~ga~lIN~aRG~ 275 (328)
+++.. ...+ ++. -+.+....+++++|+++-|-
T Consensus 82 ~v~~~-~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 82 TAGPR-QKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp CCCCC-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 99532 2111 010 11222236889999987654
No 263
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.55 E-value=0.0015 Score=61.95 Aligned_cols=39 Identities=26% Similarity=0.486 Sum_probs=34.9
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchh
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~ 201 (328)
.+.|++|+|+|.|.+|+.+++.+ +.+|++|+++|+++..
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa-~~lG~~viv~d~~~~~ 47 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSA-QKMGYKVVVLDPSEDC 47 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCC
Confidence 46799999999999999999995 7999999999987653
No 264
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.54 E-value=0.0051 Score=58.83 Aligned_cols=87 Identities=16% Similarity=0.118 Sum_probs=65.7
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
-.++-|+|.|.+|+.+|+.+ +.+|++|+++|+++.- .+ .+-+..+|-++...
T Consensus 204 ~~rL~IfGAGhva~ala~~a-~~lg~~V~v~D~R~~~--------------------------~~-~~~fp~a~~~~~~~ 255 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQG-AFLGYRVTVCDARPVF--------------------------AT-TARFPTADEVVVDW 255 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHH-HHTTCEEEEEESCTTT--------------------------SC-TTTCSSSSEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEECCchhh--------------------------cc-cccCCCceEEEeCC
Confidence 45899999999999999995 7999999999987531 01 12245666555554
Q ss_pred CCChhhhccccHHHHhc------CCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 245 VLDKTTYHLINKERLAT------MKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 245 plt~~t~~li~~~~~~~------mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
| .+.+.. +.+++++|=..++.-.|...|..+|+++
T Consensus 256 p----------~~~~~~~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~ 296 (386)
T 2we8_A 256 P----------HRYLAAQAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLP 296 (386)
T ss_dssp H----------HHHHHHHHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSS
T ss_pred h----------HHHHHhhccccCCCCCcEEEEEECChHhHHHHHHHHhcCC
Confidence 4 122222 6788999999999999999999999886
No 265
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=96.53 E-value=0.32 Score=45.84 Aligned_cols=141 Identities=14% Similarity=0.089 Sum_probs=82.7
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC--HHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYAR 182 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G--~IG~~vA~ 182 (328)
++--+|+|.|.-|....+. .+++=++.+.++. .+..+.|.+|++||=| ++.++.+.
T Consensus 143 a~~s~vPVING~g~~~HPt--QaL~Dl~Ti~e~~--------------------~~~~l~gl~ia~vGD~~~~va~S~~~ 200 (358)
T 4h31_A 143 GAFAGVPVWNGLTDEFHPT--QILADFLTMLEHS--------------------QGKALADIQFAYLGDARNNVGNSLMV 200 (358)
T ss_dssp HHHSSSCEEESCCSSCCHH--HHHHHHHHHHHTT--------------------TTCCGGGCEEEEESCTTSHHHHHHHH
T ss_pred hhhccCceECCCCcCCCch--HHHHHHHHHHHHh--------------------cCCCcCceEEEecCCCCcccchHHHH
Confidence 4556799999555443333 2333333333211 1246889999999954 79999999
Q ss_pred HHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC----CChhh--------
Q 020301 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV----LDKTT-------- 250 (328)
Q Consensus 183 ~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p----lt~~t-------- 250 (328)
.+ ..||++|.+..|..-...++..+.....+...| .......+++|.++.||+|..-.= ..++.
T Consensus 201 ~~-~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g---~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~ 276 (358)
T 4h31_A 201 GA-AKMGMDIRLVGPQAYWPDEELVAACQAIAKQTG---GKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALM 276 (358)
T ss_dssp HH-HHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHT---CEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHH
T ss_pred HH-HhcCceEEEeCCcccCCCHHHHHHHHHHHHHcC---CcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHH
Confidence 86 689999999987532111111110000111112 122234689999999999974321 11111
Q ss_pred -hccccHHHHhcC-CCCcEEEEc
Q 020301 251 -YHLINKERLATM-KKEAILVNC 271 (328)
Q Consensus 251 -~~li~~~~~~~m-k~ga~lIN~ 271 (328)
..-++.+.++++ ||+++|.-+
T Consensus 277 ~~y~v~~~~l~~~ak~~~i~mH~ 299 (358)
T 4h31_A 277 KPYQVNMNVLKQTGNPNVKFMHC 299 (358)
T ss_dssp GGGCBCHHHHHHTTCTTCEEEEC
T ss_pred hCcccCHHHHHhcCCCCcEEECC
Confidence 123688888864 789988865
No 266
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.53 E-value=0.0056 Score=56.84 Aligned_cols=68 Identities=15% Similarity=0.186 Sum_probs=47.2
Q ss_pred CEEEEEecCHHHH-HHHHHHHhcCCcEE-EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEE
Q 020301 166 QTVGVIGAGRIGS-AYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~-~vA~~l~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (328)
.++||||+|.+|. .+++.+ +.-++++ .++|+++... +++.+.| + ....+.+++++++ +.|+|+
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l-~~~~~~lvav~d~~~~~~-~~~a~~~-------~----~~~~~~~~~~ll~~~~~D~V~ 71 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQL-IDAGAELAGVFESDSDNR-AKFTSLF-------P----SVPFAASAEQLITDASIDLIA 71 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHH-HHTTCEEEEEECSCTTSC-HHHHHHS-------T----TCCBCSCHHHHHTCTTCCEEE
T ss_pred cEEEEECCChHHHHHhhhhh-cCCCcEEEEEeCCCHHHH-HHHHHhc-------C----CCcccCCHHHHhhCCCCCEEE
Confidence 4799999999996 677776 4458886 5788876432 2222222 1 1123579999997 689999
Q ss_pred EcCCC
Q 020301 242 LHPVL 246 (328)
Q Consensus 242 l~~pl 246 (328)
++.|.
T Consensus 72 i~tp~ 76 (336)
T 2p2s_A 72 CAVIP 76 (336)
T ss_dssp ECSCG
T ss_pred EeCCh
Confidence 99994
No 267
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.53 E-value=0.23 Score=46.25 Aligned_cols=155 Identities=15% Similarity=0.135 Sum_probs=91.2
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecC--HHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYAR 182 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G--~IG~~vA~ 182 (328)
++--+|+|.|.-.....+. .+++=++.+.+++.. .+ + ....+.|.+|+++|=| ++.++++.
T Consensus 118 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~g~------~~----~-----~~~~l~gl~va~vGD~~~~va~Sl~~ 180 (328)
T 3grf_A 118 AQHASVPCINALDDFGHPL--QMVCDFMTIKEKFTA------AG----E-----FSNGFKGIKFAYCGDSMNNVTYDLMR 180 (328)
T ss_dssp HHHCSSCEEESSCSSCCHH--HHHHHHHHHHHHHHH------TT----C-----CTTTGGGCCEEEESCCSSHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhCC------cc----c-----cccccCCcEEEEeCCCCcchHHHHHH
Confidence 4456799999755433332 334444444443210 00 0 1135899999999986 88889998
Q ss_pred HHHhcCCcEEEEEcCCchh--HHHHHHhhhhhhhhc--CCCCCccccccCCHHHHhhcCCEEEEc----CCCChh-----
Q 020301 183 MMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKA--NGEQPVTWKRASSMDEVLREADVISLH----PVLDKT----- 249 (328)
Q Consensus 183 ~l~~~fg~~V~~~d~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ell~~aDiV~l~----~plt~~----- 249 (328)
.+ ..||++|.+..|..-. ..++..+...+.++. .| .......++++.++.||+|..- +-.-++
T Consensus 181 ~~-~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g---~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~ 256 (328)
T 3grf_A 181 GC-ALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTG---GSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEAR 256 (328)
T ss_dssp HH-HHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCC---CEEEEESSHHHHHTTCSEEEECCCC--------CCTH
T ss_pred HH-HHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCC---CeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHH
Confidence 86 5799999999875322 111111100000111 12 1223347999999999999753 220111
Q ss_pred ----hhccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 250 ----TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 250 ----t~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 257 ~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~e 294 (328)
T 3grf_A 257 LKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTAS 294 (328)
T ss_dssp HHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHH
T ss_pred HHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCHH
Confidence 12347999999999999998874 77656544
No 268
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.50 E-value=0.34 Score=45.53 Aligned_cols=114 Identities=12% Similarity=0.156 Sum_probs=71.6
Q ss_pred ccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
.+.|.+|++||= +++..+++..+ ..||++|.+..|..-...+...+.-.+.++..| .......+++ .++++|+|
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~-av~~aDVV 224 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLIT-TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSG---GSFLVTDDAS-SVEGADFL 224 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHS---CEEEEECCGG-GGTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHHHHHcC---CeEEEECCHH-HHcCCCEE
Confidence 588999999996 67888888886 589999999987532111111110000011112 1122346889 99999999
Q ss_pred EEcC----CCC----hh----h--hccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 241 SLHP----VLD----KT----T--YHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 241 ~l~~----plt----~~----t--~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
..-+ ... ++ . .--++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 225 ytd~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 281 (355)
T 4a8p_A 225 YTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 281 (355)
T ss_dssp EECCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred EecccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 8632 110 11 1 1347899999999999998874 77666544
No 269
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.50 E-value=0.0066 Score=56.79 Aligned_cols=68 Identities=15% Similarity=0.167 Sum_probs=47.4
Q ss_pred CEEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEEE
Q 020301 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~-vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (328)
.++||||+|.||+. .++.+.+.-+++|. ++|+++.... +.+ .+...+.++++++.. .|+|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~----~~~-----------~~~~~~~~~~~ll~~~~vD~V~ 72 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH----ADW-----------PAIPVVSDPQMLFNDPSIDLIV 72 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH----TTC-----------SSCCEESCHHHHHHCSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH----hhC-----------CCCceECCHHHHhcCCCCCEEE
Confidence 47999999999997 77776333378876 6788764321 000 112345799999986 89999
Q ss_pred EcCCCCh
Q 020301 242 LHPVLDK 248 (328)
Q Consensus 242 l~~plt~ 248 (328)
+|.|...
T Consensus 73 i~tp~~~ 79 (352)
T 3kux_A 73 IPTPNDT 79 (352)
T ss_dssp ECSCTTT
T ss_pred EeCChHH
Confidence 9999543
No 270
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.50 E-value=0.0018 Score=58.24 Aligned_cols=95 Identities=20% Similarity=0.200 Sum_probs=61.4
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhcCC-CC
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANG-EQ 220 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~-~~ 220 (328)
..|.+++|.|+|.|.+|..+|+.|+ ..|. ++..+|+..- .+.+...+. +.+.. ..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La-~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~----l~~~np~~ 98 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLA-GAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQR----LTQLNPDI 98 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHH-HTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHH----HHHHCTTS
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHH-HcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHH----HHHHCCCC
Confidence 4689999999999999999999984 6776 7888876531 111111111 00000 00
Q ss_pred Ccccc----ccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhc
Q 020301 221 PVTWK----RASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (328)
Q Consensus 221 ~~~~~----~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~ 261 (328)
..... ...+++++++++|+|+.+.. +.+++.++++...+.
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~ 142 (251)
T 1zud_1 99 QLTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL 142 (251)
T ss_dssp EEEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT
T ss_pred EEEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh
Confidence 00000 01246678999999999987 778899998887764
No 271
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.47 E-value=0.0046 Score=60.68 Aligned_cols=127 Identities=13% Similarity=0.211 Sum_probs=72.6
Q ss_pred CCEEEEEecCHH-HHHHHHHHHh---cC-CcEEEEEcCCchhHHHHHHhhhhhhh-hcCCCCCccccccCCHHHHhhcCC
Q 020301 165 GQTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQATRLEKFVTAYGQFL-KANGEQPVTWKRASSMDEVLREAD 238 (328)
Q Consensus 165 g~tvgIiG~G~I-G~~vA~~l~~---~f-g~~V~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ell~~aD 238 (328)
..+|+|||.|.. |.++|..|++ ++ +-+|..||+.... .+...+ ..+.. ...+ .+.......++++.++.||
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~-~~~~~~-~~~~~l~~~~-~~~~I~~t~D~~eal~~AD 104 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKER-QDRIAG-ACDVFIREKA-PDIEFAATTDPEEAFTDVD 104 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHH-HHHHHH-HHHHHHHHHC-TTSEEEEESCHHHHHSSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHH-HHHHHH-HHHHHhccCC-CCCEEEEECCHHHHHcCCC
Confidence 458999999998 6667755543 45 6689999998643 221111 11111 1111 1222223358889999999
Q ss_pred EEEEcCCCChh---hh--------c--------------------ccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHH
Q 020301 239 VISLHPVLDKT---TY--------H--------------------LIN--KERLATMKKEAILVNCSRGPVIDEVALVEH 285 (328)
Q Consensus 239 iV~l~~plt~~---t~--------~--------------------li~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~a 285 (328)
+|++++|.... ++ + ++- .+.+....|++++||++-.-=+-..++.+.
T Consensus 105 ~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~ 184 (472)
T 1u8x_X 105 FVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRL 184 (472)
T ss_dssp EEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHH
T ss_pred EEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Confidence 99999985211 11 0 110 123334458999999977553444444444
Q ss_pred HHcCCccEE
Q 020301 286 LKQNPMFRV 294 (328)
Q Consensus 286 L~~g~i~ga 294 (328)
....++.|.
T Consensus 185 ~p~~rViG~ 193 (472)
T 1u8x_X 185 RPNSKILNI 193 (472)
T ss_dssp STTCCEEEC
T ss_pred CCCCCEEEe
Confidence 333355555
No 272
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.45 E-value=0.29 Score=45.70 Aligned_cols=150 Identities=15% Similarity=0.134 Sum_probs=88.0
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec-CHHHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA-GRIGSAYARM 183 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~-G~IG~~vA~~ 183 (328)
++--+|+|.|.-+....+. .+++=++.+.++++ .|..+.|.+|++||= +++..+++..
T Consensus 136 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~~-------------------~G~~l~glkva~vGD~~rva~Sl~~~ 194 (339)
T 4a8t_A 136 ANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP-------------------EGKKLEDCKVVFVGDATQVCFSLGLI 194 (339)
T ss_dssp HHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC-------------------TTCCGGGCEEEEESSCCHHHHHHHHH
T ss_pred HHhCCCCEEECCCCCcCcH--HHHHHHHHHHHHhh-------------------cCCCCCCCEEEEECCCchhHHHHHHH
Confidence 4556799999865433322 23333333332210 022588999999996 6788888888
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC--CC--Ch----h----h-
Q 020301 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP--VL--DK----T----T- 250 (328)
Q Consensus 184 l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~--pl--t~----~----t- 250 (328)
+ ..||++|.+..|..-...+...+.-.+.++..| .......+++ .+++||+|..-+ .. .. + .
T Consensus 195 ~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~ 269 (339)
T 4a8t_A 195 T-TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSG---GSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFY 269 (339)
T ss_dssp H-HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHC---CEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHT
T ss_pred H-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhc
Confidence 6 589999999987532111111110000011112 1122346889 999999998633 11 11 1 1
Q ss_pred -hccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 251 -YHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 251 -~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
..-++.+.++++|++++|.-+. ||.=|+.+
T Consensus 270 ~~y~vt~ell~~ak~dai~mHcLPa~Rg~EIt~e 303 (339)
T 4a8t_A 270 PKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 303 (339)
T ss_dssp TTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred cccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 1447899999999999998874 67656554
No 273
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.43 E-value=0.0048 Score=58.02 Aligned_cols=67 Identities=10% Similarity=0.194 Sum_probs=47.1
Q ss_pred CEEEEEecCHHHHH-HHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEE
Q 020301 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (328)
Q Consensus 166 ~tvgIiG~G~IG~~-vA~~l~~~f-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (328)
.++||||+|.||+. .++.+ +.. +++|. ++|+++.... +.| + +...+.+++++++ +.|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~----~~~-------~----~~~~~~~~~~ll~~~~vD~V 69 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLL-DVLDEYQISKIMTSRTEEVK----RDF-------P----DAEVVHELEEITNDPAIELV 69 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHH-TTCTTEEEEEEECSCHHHHH----HHC-------T----TSEEESSTHHHHTCTTCCEE
T ss_pred ceEEEEccCHHHHHHHHHHH-hhCCCeEEEEEEcCCHHHHH----hhC-------C----CCceECCHHHHhcCCCCCEE
Confidence 47999999999997 67765 444 78875 6688764311 111 1 1224579999998 78999
Q ss_pred EEcCCCCh
Q 020301 241 SLHPVLDK 248 (328)
Q Consensus 241 ~l~~plt~ 248 (328)
++|.|...
T Consensus 70 ~i~tp~~~ 77 (358)
T 3gdo_A 70 IVTTPSGL 77 (358)
T ss_dssp EECSCTTT
T ss_pred EEcCCcHH
Confidence 99999543
No 274
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.42 E-value=0.015 Score=53.99 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=62.0
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.+|+|||.|.||..+|..++ ..|. +|..+|+..... +.............+. .... ...+..+.++.||+|+++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~-~~~~~~el~l~D~~~~k~-~g~a~DL~~~~~~~~~-~~~v-~~~~~~~a~~~aDvVii~ 76 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVA-RQDVAKEVVMVDIKDGMP-QGKALDMRESSPIHGF-DTRV-TGTNDYGPTEDSDVCIIT 76 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCSSEEEEECSSTTHH-HHHHHHHHHHHHHHTC-CCEE-EEESSSGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCchHHH-HHHHHHHhccccccCC-CcEE-EECCCHHHhCCCCEEEEC
Confidence 37999999999999999874 3344 999999987432 2111111000000000 0111 112446789999999999
Q ss_pred CCCChhhhc-----cc--c-------HHHHhcCCCCcEEEEcCCCcccCHHHH
Q 020301 244 PVLDKTTYH-----LI--N-------KERLATMKKEAILVNCSRGPVIDEVAL 282 (328)
Q Consensus 244 ~plt~~t~~-----li--~-------~~~~~~mk~ga~lIN~aRG~~vde~aL 282 (328)
.+.. ...+ ++ | .+.+....|+++++|++ ..+|.-..
T Consensus 77 ag~~-~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~t~ 126 (314)
T 3nep_X 77 AGLP-RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA--NPLDVMTY 126 (314)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC--SSHHHHHH
T ss_pred CCCC-CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC--CchhHHHH
Confidence 8643 2222 11 1 12344556899999997 45554433
No 275
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.41 E-value=0.019 Score=53.21 Aligned_cols=123 Identities=20% Similarity=0.215 Sum_probs=68.4
Q ss_pred CCEEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
..+|+|||.|.+|..+|..++. ++.-+|..||..... .+.............+ ...... . +..+.++.||+|+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~-~~g~~~dl~~~~~~~~-~~~~v~-~-~~~~a~~~aDvVvi~ 81 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEK-VRGDVMDLKHATPYSP-TTVRVK-A-GEYSDCHDADLVVIC 81 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHH-HHHHHHHHHHHGGGSS-SCCEEE-E-CCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhH-hhhhhhhHHhhhhhcC-CCeEEE-e-CCHHHhCCCCEEEEC
Confidence 4689999999999999988753 233489999987532 2221111111000000 111111 1 346779999999999
Q ss_pred CCCChhhhc------------ccc--HHHHhcCCCCcEEEEcCCCcccCH--HHHHHH--HHcCCccEE
Q 020301 244 PVLDKTTYH------------LIN--KERLATMKKEAILVNCSRGPVIDE--VALVEH--LKQNPMFRV 294 (328)
Q Consensus 244 ~plt~~t~~------------li~--~~~~~~mk~ga~lIN~aRG~~vde--~aL~~a--L~~g~i~ga 294 (328)
.+... ..+ ++- .+.+....|++++||++ ..+|. .++.+. +...++.|.
T Consensus 82 ag~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 82 AGAAQ-KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCC-CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHhCCCHHHEEec
Confidence 87432 221 110 12333347899999986 44443 333333 333356666
No 276
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.40 E-value=0.0086 Score=55.93 Aligned_cols=108 Identities=20% Similarity=0.246 Sum_probs=61.8
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
.++|+|||.|.||..+|..|+ ..|. +|..+|+..... +...........-.+ ..... ..+..+.++.||+|++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~-~~~~~~~l~l~D~~~~k~-~g~a~DL~~~~~~~~-~~v~i--~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALI-NQGITDELVVIDVNKEKA-MGDVMDLNHGKAFAP-QPVKT--SYGTYEDCKDADIVCI 79 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHHH-HHHHHHHHHTGGGSS-SCCEE--EEECGGGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEecchHHH-HHHHHHHHhcccccc-CCeEE--EeCcHHHhCCCCEEEE
Confidence 568999999999999999874 4455 999999975432 221110100000000 01111 1223467899999999
Q ss_pred cCCCChhhhcc-----c--c----H---HHHhcCCCCcEEEEcCCCcccCHH
Q 020301 243 HPVLDKTTYHL-----I--N----K---ERLATMKKEAILVNCSRGPVIDEV 280 (328)
Q Consensus 243 ~~plt~~t~~l-----i--~----~---~~~~~mk~ga~lIN~aRG~~vde~ 280 (328)
+.+. +...++ + | + +.+....|++++++++- .+|.-
T Consensus 80 ~ag~-p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN--Pvd~~ 128 (326)
T 3pqe_A 80 CAGA-NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN--PVDIL 128 (326)
T ss_dssp CCSC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS--SHHHH
T ss_pred eccc-CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC--hHHHH
Confidence 9863 222221 1 1 1 23334568999999974 45543
No 277
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.39 E-value=0.0095 Score=55.33 Aligned_cols=123 Identities=19% Similarity=0.219 Sum_probs=65.6
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.+|+|||.|.+|..+|..++ ..|. +|..+|..... .+.....+.... . -....... ..+ .+.++.||+|+++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~-~~~~~~ev~L~Di~~~~-~~g~~~dl~~~~-~-~~~~~~i~-~~~-~~a~~~aDvVii~ 81 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMA-LRQTANELVLIDVFKEK-AIGEAMDINHGL-P-FMGQMSLY-AGD-YSDVKDCDVIVVT 81 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCSSEEEEECCC----CCHHHHHHTTSC-C-CTTCEEEC---C-GGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChHH-HHHHHHHHHHhH-H-hcCCeEEE-ECC-HHHhCCCCEEEEc
Confidence 57999999999999999875 4465 99999987532 111111111000 0 00011111 123 5668999999999
Q ss_pred CCCChhhhcc-------cc----H---HHHhcCCCCcEEEEcCCCcccCHH--HHHHH--HHcCCccEEE--Ee
Q 020301 244 PVLDKTTYHL-------IN----K---ERLATMKKEAILVNCSRGPVIDEV--ALVEH--LKQNPMFRVG--LD 297 (328)
Q Consensus 244 ~plt~~t~~l-------i~----~---~~~~~mk~ga~lIN~aRG~~vde~--aL~~a--L~~g~i~gaa--lD 297 (328)
.+. +...++ .| . +.+....|++++||++ ..+|.- .+.+. +...++.|.+ ||
T Consensus 82 ~g~-p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~~~~~~k~s~~p~~rviG~gt~Ld 152 (318)
T 1y6j_A 82 AGA-NRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS--NPVDIITYMIQKWSGLPVGKVIGSGTVLD 152 (318)
T ss_dssp CCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS--SSHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred CCC-CCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHcCCCHHHEeccCCchH
Confidence 984 332221 01 1 1223336899999974 344443 33333 3334666663 46
No 278
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.38 E-value=0.0032 Score=59.23 Aligned_cols=95 Identities=14% Similarity=0.170 Sum_probs=63.2
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCc---hhHHHHHHhhhhhhhhcCCCCCccccccCCH-HHHh---
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQ---ATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVL--- 234 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell--- 234 (328)
.+.|++|.|+|.|.||..+++.+ +.+|++|++.+++. ... ++...+ |.... . .. ++ +++.
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~~--~~~~~~-------ga~~v-~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLF-RTYGLEVWMANRREPTEVEQ--TVIEET-------KTNYY-N-SS-NGYDKLKDSV 244 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHH-HHHTCEEEEEESSCCCHHHH--HHHHHH-------TCEEE-E-CT-TCSHHHHHHH
T ss_pred cCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCccchHHH--HHHHHh-------CCcee-c-hH-HHHHHHHHhC
Confidence 57799999999999999999985 78999999999876 332 222222 21111 1 11 22 1221
Q ss_pred hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 235 ~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
...|+|+.++...... + +..++.|+++..+|+++-
T Consensus 245 ~~~d~vid~~g~~~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 GKFDVIIDATGADVNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCEEEEEECCCCCTHH---H-HHHGGGEEEEEEEEECSC
T ss_pred CCCCEEEECCCChHHH---H-HHHHHHHhcCCEEEEEec
Confidence 3589999998743222 0 556788888888888864
No 279
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.38 E-value=0.0086 Score=56.20 Aligned_cols=71 Identities=20% Similarity=0.326 Sum_probs=45.6
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcC--------CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHH
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGF--------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~f--------g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el 233 (328)
++--+|||||+|.||+.-++.+ +.+ +++|. ++|+++.. .+++.+.|+ .. ..+.+++++
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~-~~~~~~~~~~~~~~lvav~d~~~~~-a~~~a~~~g-------~~----~~y~d~~el 89 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAW-NAVKTVFGDVERPRLVHLAEANAGL-AEARAGEFG-------FE----KATADWRAL 89 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHH-TTHHHHHCSSCCCEEEEEECC--TT-HHHHHHHHT-------CS----EEESCHHHH
T ss_pred CCCccEEEEcCCHHHHHHHHHH-HhhhhhhccCCCcEEEEEECCCHHH-HHHHHHHhC-------CC----eecCCHHHH
Confidence 3445899999999999877654 332 56765 56887643 233333332 11 235799999
Q ss_pred hhc--CCEEEEcCCC
Q 020301 234 LRE--ADVISLHPVL 246 (328)
Q Consensus 234 l~~--aDiV~l~~pl 246 (328)
|+. -|+|+++.|.
T Consensus 90 l~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 90 IADPEVDVVSVTTPN 104 (393)
T ss_dssp HHCTTCCEEEECSCG
T ss_pred hcCCCCcEEEECCCh
Confidence 974 6999999993
No 280
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.38 E-value=0.071 Score=49.86 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=72.8
Q ss_pred ccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEE
Q 020301 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (328)
.+.|.+|++||= +++.++++..+ ..||++|.+..|..-...+...+...+.++..|. ......+++|.++.||+|
T Consensus 176 ~l~glkva~vGD~~nva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~---~v~~~~d~~eav~~aDVv 251 (340)
T 4ep1_A 176 TFKGIKLAYVGDGNNVCHSLLLAS-AKVGMHMTVATPVGYRPNEEIVKKALAIAKETGA---EIEILHNPELAVNEADFI 251 (340)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCC---CEEEESCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCC---eEEEECCHHHHhCCCCEE
Confidence 378999999996 56778888876 5799999999875321111111100000111121 122346899999999999
Q ss_pred EEcCCCCh------h-----hhccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 241 SLHPVLDK------T-----TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 241 ~l~~plt~------~-----t~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
..-.=... + ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 252 yt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 305 (340)
T 4ep1_A 252 YTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGE 305 (340)
T ss_dssp EECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred EecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 66442110 1 12347999999999999999886 77666544
No 281
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.37 E-value=0.053 Score=52.20 Aligned_cols=118 Identities=19% Similarity=0.227 Sum_probs=73.1
Q ss_pred ccccCCCEEEEEecCHHHHHHHHHHHhc-CCcEEEE-EcCC---------chhHHHHHHhhhhhhhhcCCCCCccccccC
Q 020301 160 GNLLKGQTVGVIGAGRIGSAYARMMVEG-FKMNLIY-YDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRAS 228 (328)
Q Consensus 160 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~-fg~~V~~-~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (328)
|.++.|+++.|.|+|++|+.+|+.| .. .|++|++ .|.+ ....+.++.+..+ ...........
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L-~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g------~l~~y~~a~~~ 276 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLI-SQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHG------TVVTYPKGERI 276 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSS------CSTTCSSSEEE
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHH-HHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhC------CcccCCCceEc
Confidence 3478999999999999999999987 56 8999983 3432 1112222211110 11110001122
Q ss_pred CHHHHh-hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 229 SMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 229 ~l~ell-~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
+.++++ ..||+++-|.. .+.++.+...+++ -.+++-.+-+++- .++- +.|.+..+.
T Consensus 277 ~~~eil~~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~a~-~~l~~~Gi~ 333 (415)
T 2tmg_A 277 TNEELLELDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PEAD-EILSRRGIL 333 (415)
T ss_dssp CHHHHTTCSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HHHH-HHHHHTTCE
T ss_pred CchhhhcCCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HHHH-HHHHHCCCE
Confidence 456665 47999998865 5667888888884 6688888888864 4443 345554443
No 282
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.37 E-value=0.0052 Score=57.67 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=65.3
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhcC-CCC
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKAN-GEQ 220 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~-~~~ 220 (328)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|...- .+.+...+. +..- ...
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La-~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~----L~~inP~v 104 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS----LKRIFPLM 104 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHH----HHHHCTTC
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHH----HHHhCCCC
Confidence 4689999999999999999999985 6676 6888887431 111111111 1100 000
Q ss_pred Ccccc-------------------ccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 221 PVTWK-------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 221 ~~~~~-------------------~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
..... ...+++++++++|+|+.++- +.+|+.++|...... +..+|+.+
T Consensus 105 ~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~~---~~plI~aa 171 (340)
T 3rui_A 105 DATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 171 (340)
T ss_dssp EEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHHT---TCEEEEEE
T ss_pred EEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHHc---CCcEEEee
Confidence 00000 01235788999999999876 678999998877754 44567754
No 283
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.34 E-value=0.0081 Score=56.24 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.4
Q ss_pred CEEEEEecCHHHHHHHHHHHhc--CCcEEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~--fg~~V~~~d~ 197 (328)
.+|||+|+|.||+.+.|.|... =.++|.+.+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~ 34 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIND 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence 3799999999999999987543 4688876654
No 284
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.33 E-value=0.0056 Score=59.79 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=37.8
Q ss_pred ccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHH
Q 020301 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE 204 (328)
Q Consensus 160 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~ 204 (328)
..++.|+++.|||.|.+|.+.++.| ...|++|.++|+...+..+
T Consensus 7 ~~~l~~~~vlVvGgG~va~~k~~~L-~~~ga~V~vi~~~~~~~~~ 50 (457)
T 1pjq_A 7 FCQLRDRDCLIVGGGDVAERKARLL-LEAGARLTVNALTFIPQFT 50 (457)
T ss_dssp EECCBTCEEEEECCSHHHHHHHHHH-HHTTBEEEEEESSCCHHHH
T ss_pred EEECCCCEEEEECCCHHHHHHHHHH-HhCcCEEEEEcCCCCHHHH
Confidence 3578999999999999999999997 5899999999997655433
No 285
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.32 E-value=0.0086 Score=56.00 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=45.9
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhcCCCCCc--------cccccCCHHHHhhcC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPV--------TWKRASSMDEVLREA 237 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~ell~~a 237 (328)
++||+|+|.||+.+++.+...-++++.+ +|+++.. .....+.++ + ...+..+. ......+.++++..+
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~-~~~~~~~~g-~-~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDF-EAYRAKELG-I-PVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSH-HHHHHHHTT-C-CEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHH-HHHHHHhcC-c-cccccccccceeccCCceEEcCcHHHhccCC
Confidence 7999999999999999874333678654 4654322 222211111 0 00000000 001235789999999
Q ss_pred CEEEEcCCCC
Q 020301 238 DVISLHPVLD 247 (328)
Q Consensus 238 DiV~l~~plt 247 (328)
|+|+.|.|..
T Consensus 81 DvV~~aTp~~ 90 (334)
T 2czc_A 81 DIIVDATPGG 90 (334)
T ss_dssp SEEEECCSTT
T ss_pred CEEEECCCcc
Confidence 9999999844
No 286
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.31 E-value=0.0055 Score=57.75 Aligned_cols=94 Identities=14% Similarity=0.199 Sum_probs=63.0
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC---HHHHhhcCCEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (328)
.|++|.|+|.|.||..+++.+ +.+|++|++.+++.... +...+ .-|.... ....+ +.++....|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~-~~~~~-------~lGa~~v--~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFA-KAFGSKVTVISTSPSKK-EEALK-------NFGADSF--LVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGH-HHHHH-------TSCCSEE--EETTCHHHHHHTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHH-------hcCCceE--EeccCHHHHHHhhCCCCEE
Confidence 688999999999999999985 79999999999876432 11111 1122111 11122 33444568999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
+.++..... -+..++.|+++..+|+++.
T Consensus 256 id~~g~~~~-----~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 256 IDTVSAVHP-----LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EECCSSCCC-----SHHHHHHEEEEEEEEECCC
T ss_pred EECCCcHHH-----HHHHHHHHhcCCEEEEEcc
Confidence 999874322 2466778888888888864
No 287
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.31 E-value=0.0088 Score=56.80 Aligned_cols=68 Identities=19% Similarity=0.279 Sum_probs=48.4
Q ss_pred CEEEEEecC-HHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEEE
Q 020301 166 QTVGVIGAG-RIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G-~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (328)
.++||||+| .+|+..++.+.+.-++++. ++|+++... ++..+.| +. ..+.+++++++. .|+|+
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g~-----~~~~~~~ell~~~~vD~V~ 69 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVR-ERFGKEY-------GI-----PVFATLAEMMQHVQMDAVY 69 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHH-HHHHHHH-------TC-----CEESSHHHHHHHSCCSEEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHc-------CC-----CeECCHHHHHcCCCCCEEE
Confidence 379999999 9999999887433478866 678876432 2222222 21 235799999985 99999
Q ss_pred EcCCC
Q 020301 242 LHPVL 246 (328)
Q Consensus 242 l~~pl 246 (328)
++.|.
T Consensus 70 i~tp~ 74 (387)
T 3moi_A 70 IASPH 74 (387)
T ss_dssp ECSCG
T ss_pred EcCCc
Confidence 99994
No 288
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.31 E-value=0.018 Score=53.52 Aligned_cols=110 Identities=15% Similarity=0.233 Sum_probs=62.0
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
..++|+|||.|.+|..+|..++ .-|. +|..+|+.+... +.............+ .........+ .+.++.||+|++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~-~~~~~~v~l~Di~~~~~-~g~a~dL~~~~~~~~-~~~~v~~t~d-~~a~~~aDvVIi 79 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLAL-IKQLGDVVLFDIAQGMP-NGKALDLLQTCPIEG-VDFKVRGTND-YKDLENSDVVIV 79 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCCEEEESC-GGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCChHHH-HHHHHHHHhhhhhcC-CCcEEEEcCC-HHHHCCCCEEEE
Confidence 3578999999999999999874 3344 999999986432 111111100000000 0111111123 468899999999
Q ss_pred cCCCChhhhcc-----c--cH-------HHHhcCCCCcEEEEcCCCcccCHH
Q 020301 243 HPVLDKTTYHL-----I--NK-------ERLATMKKEAILVNCSRGPVIDEV 280 (328)
Q Consensus 243 ~~plt~~t~~l-----i--~~-------~~~~~mk~ga~lIN~aRG~~vde~ 280 (328)
+.+. +...++ + |. +.+....|++++++++ ..+|.-
T Consensus 80 ~ag~-p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 128 (321)
T 3p7m_A 80 TAGV-PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIM 128 (321)
T ss_dssp CCSC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHH
T ss_pred cCCc-CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHH
Confidence 9753 221221 1 11 1223345899999995 455543
No 289
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.30 E-value=0.0096 Score=55.54 Aligned_cols=106 Identities=15% Similarity=0.264 Sum_probs=60.3
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
+..++|+|||.|.+|..+|..|+ .-|. +|..||+..... +.............+ .+.......+. +.++.||+|+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~-~~~~~~v~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~v~~t~d~-~a~~~aDiVI 80 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAG-LKELGDVVLFDIAEGTP-QGKGLDIAESSPVDG-FDAKFTGANDY-AAIEGADVVI 80 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHH-HHHHHHHHHHHHHHT-CCCCEEEESSG-GGGTTCSEEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCchhH-HHHHHHHhchhhhcC-CCCEEEEeCCH-HHHCCCCEEE
Confidence 45679999999999999999874 4455 999999987532 111100000000000 01111112344 7889999999
Q ss_pred EcCCCChhhhcc-----c--cH-------HHHhcCCCCcEEEEcCC
Q 020301 242 LHPVLDKTTYHL-----I--NK-------ERLATMKKEAILVNCSR 273 (328)
Q Consensus 242 l~~plt~~t~~l-----i--~~-------~~~~~mk~ga~lIN~aR 273 (328)
++.+. +...++ + |. +.+....|++++++++-
T Consensus 81 iaag~-p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 81 VTAGV-PRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp ECCSC-CCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EccCc-CCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 99752 222221 1 11 12233458999999974
No 290
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.29 E-value=0.011 Score=57.59 Aligned_cols=126 Identities=15% Similarity=0.183 Sum_probs=73.0
Q ss_pred CEEEEEecCHH-HHHHHHHHHh---cC-CcEEEEEcCCc--hhHHHHHHhhhhhhh-hcCCCCCccccccCCHHHHhhcC
Q 020301 166 QTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQ--ATRLEKFVTAYGQFL-KANGEQPVTWKRASSMDEVLREA 237 (328)
Q Consensus 166 ~tvgIiG~G~I-G~~vA~~l~~---~f-g~~V~~~d~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ell~~a 237 (328)
.+|+|||.|.. |..++..|++ .+ +-+|..||+.. .. .+...+ ..... ...+ .+.......++++.++.|
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~-~~~~~~-~~~~~~~~~~-~~~~i~~t~D~~eal~gA 84 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEK-LEIVGA-LAKRMVEKAG-VPIEIHLTLDRRRALDGA 84 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHH-HHHHHH-HHHHHHHHTT-CCCEEEEESCHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHH-HHHHHH-HHHHHHhhcC-CCcEEEEeCCHHHHhCCC
Confidence 58999999999 8887665543 45 56899999977 43 121111 11111 1111 122232236888899999
Q ss_pred CEEEEcCCCChh---hh--------cc--------------------cc--HHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 020301 238 DVISLHPVLDKT---TY--------HL--------------------IN--KERLATMKKEAILVNCSRGPVIDEVALVE 284 (328)
Q Consensus 238 DiV~l~~plt~~---t~--------~l--------------------i~--~~~~~~mk~ga~lIN~aRG~~vde~aL~~ 284 (328)
|+|+++.|.... ++ ++ +- .+.+....|++++||++-.-=+-..++.+
T Consensus 85 D~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k 164 (450)
T 1s6y_A 85 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLR 164 (450)
T ss_dssp SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHH
T ss_pred CEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH
Confidence 999999995321 11 11 10 12334445899999998765444555555
Q ss_pred HHHcCCccEE
Q 020301 285 HLKQNPMFRV 294 (328)
Q Consensus 285 aL~~g~i~ga 294 (328)
.....++.|.
T Consensus 165 ~~p~~rViG~ 174 (450)
T 1s6y_A 165 YTKQEKVVGL 174 (450)
T ss_dssp HCCCCCEEEC
T ss_pred hCCCCCEEEe
Confidence 4323345554
No 291
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.29 E-value=0.0057 Score=57.21 Aligned_cols=110 Identities=7% Similarity=0.038 Sum_probs=64.0
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
..++|+|||.|.||..+|..++ ..|. +|..+|...... +...........- . .........+.++ ++.||+|+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la-~~g~~~ev~L~Di~~~~~-~g~a~DL~~~~~~-~-~~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVL-MKDLADEVALVDVMEDKL-KGEMMDLEHGSLF-L-HTAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHH-HHCCCSEEEEECSCHHHH-HHHHHHHHHHGGG-S-CCSEEEEESSSCS-CSSCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECCHHHH-HHHHHHhhhhhhc-c-cCCeEEEcCCHHH-hCCCCEEE
Confidence 5689999999999999999874 4455 899999976432 2211111000000 0 0111112245666 89999999
Q ss_pred EcCCCCh---hhh-ccc--cH-------HHHhcCCCCcEEEEcCCCcccCHH
Q 020301 242 LHPVLDK---TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEV 280 (328)
Q Consensus 242 l~~plt~---~t~-~li--~~-------~~~~~mk~ga~lIN~aRG~~vde~ 280 (328)
++..... +|| .++ |. +.+....|++++++++ ..+|.-
T Consensus 95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt--NPvdi~ 144 (330)
T 3ldh_A 95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP--ELGTDK 144 (330)
T ss_dssp ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHHH
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC--CccHHH
Confidence 9865321 122 122 11 2344457999999997 445543
No 292
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.28 E-value=0.0091 Score=55.17 Aligned_cols=107 Identities=16% Similarity=0.262 Sum_probs=60.0
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
++|+|||.|.+|..+|..++ ..|. +|..+|...... +.............. .........+. +.++.||+|+++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la-~~g~~~v~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLA-AKELGDIVLLDIVEGVP-QGKALDLYEASPIEG-FDVRVTGTNNY-ADTANSDVIVVTS 78 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCCccHH-HHHHHhHHHhHhhcC-CCeEEEECCCH-HHHCCCCEEEEcC
Confidence 58999999999999999874 5564 899999876432 221111111000000 01111122466 6689999999998
Q ss_pred CCChhhhcc-----------ccHH---HHhcCCCCcEEEEcCCCcccCH
Q 020301 245 VLDKTTYHL-----------INKE---RLATMKKEAILVNCSRGPVIDE 279 (328)
Q Consensus 245 plt~~t~~l-----------i~~~---~~~~mk~ga~lIN~aRG~~vde 279 (328)
+. +...++ +-.+ .+....|++++++.+- .+|.
T Consensus 79 g~-p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN--Pv~~ 124 (309)
T 1ur5_A 79 GA-PRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN--PLDA 124 (309)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS--SHHH
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC--chHH
Confidence 53 322221 1012 2233358999999743 4444
No 293
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.27 E-value=0.073 Score=49.21 Aligned_cols=142 Identities=13% Similarity=0.149 Sum_probs=87.5
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec-CHHHHHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA-GRIGSAYARM 183 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~-G~IG~~vA~~ 183 (328)
++-.+|+|.|.-+....+. .+++=++.+.+++ | .+.|.+|+++|= +++.++.+..
T Consensus 118 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~---------------------g-~l~glkva~vGD~~~va~Sl~~~ 173 (309)
T 4f2g_A 118 AENSRVPVINGLTNEYHPC--QVLADIFTYYEHR---------------------G-PIRGKTVAWVGDANNMLYTWIQA 173 (309)
T ss_dssp HHTCSSCEEEEECSSCCHH--HHHHHHHHHHHHH---------------------S-CCTTCEEEEESCCCHHHHHHHHH
T ss_pred HHhCCCCEEECCCCccCcH--HHHHHHHHHHHHh---------------------C-CCCCCEEEEECCCcchHHHHHHH
Confidence 4456799999766544333 2233333333221 1 478999999996 5677888887
Q ss_pred HHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC----CCCh---h-----hh
Q 020301 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP----VLDK---T-----TY 251 (328)
Q Consensus 184 l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~----plt~---~-----t~ 251 (328)
+ ..||++|.+..|..-...++.. .+.. ........+++|.+++||+|..-. .... + ..
T Consensus 174 ~-~~~G~~v~~~~P~~~~~~~~~~------~~~~---g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~ 243 (309)
T 4f2g_A 174 A-RILDFKLQLSTPPGYALDAKLV------DAES---APFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFAD 243 (309)
T ss_dssp H-HHHTCEEEEECCGGGCCCGGGS------CGGG---GGGEEECSSHHHHTTTCSEEEECCC------------CCSGGG
T ss_pred H-HHcCCEEEEECCcccCCCHHHH------HHHc---CCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcC
Confidence 6 5799999999874321111100 0000 112234579999999999997643 1100 0 12
Q ss_pred ccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 252 HLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 252 ~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
.-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 244 y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 275 (309)
T 4f2g_A 244 WCVDEEMMSHANSDALFMHCLPAHRGEEVTAG 275 (309)
T ss_dssp GCBCHHHHTTSCTTCEEEECSSCCBTTTBCHH
T ss_pred ceeCHHHHHhcCCCeEEECCCCCCCCceecHH
Confidence 347999999999999999874 77656544
No 294
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.26 E-value=0.012 Score=55.20 Aligned_cols=31 Identities=32% Similarity=0.487 Sum_probs=25.3
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d 196 (328)
.+|||+|+|+||+.++|.+...-+++|.+..
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~ 34 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIN 34 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEec
Confidence 3799999999999999987544578877654
No 295
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.25 E-value=0.0038 Score=54.89 Aligned_cols=68 Identities=15% Similarity=0.248 Sum_probs=42.4
Q ss_pred CEEEEEecCHHHHHHHHH-HHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARM-MVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~-l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.+++|||.|++|+.+|+. .....|+++. ++|.++...- +. ..........++++++++.|+++++
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g-----------~~--i~gv~V~~~~dl~eli~~~D~ViIA 152 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIG-----------TE--VGGVPVYNLDDLEQHVKDESVAILT 152 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTT-----------CE--ETTEEEEEGGGHHHHCSSCCEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHH-----------hH--hcCCeeechhhHHHHHHhCCEEEEe
Confidence 359999999999999993 2235678765 5677654310 00 0111222346899999777999999
Q ss_pred CCC
Q 020301 244 PVL 246 (328)
Q Consensus 244 ~pl 246 (328)
+|.
T Consensus 153 vPs 155 (215)
T 2vt3_A 153 VPA 155 (215)
T ss_dssp SCH
T ss_pred cCc
Confidence 993
No 296
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.24 E-value=0.0041 Score=60.62 Aligned_cols=76 Identities=9% Similarity=0.128 Sum_probs=49.5
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCc--cccccCCHHHHhhcCCEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiV~ 241 (328)
.+++++|+|.|.||+.+|+.|+ ..|.+|.++||+.... ++..+.++ +.... ......+++++++.+|+|+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~-~~G~~V~v~~R~~~~a-~~la~~~~------~~~~~~~Dv~d~~~l~~~l~~~DvVI 73 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLT-DSGIKVTVACRTLESA-KKLSAGVQ------HSTPISLDVNDDAALDAEVAKHDLVI 73 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHH-TTTCEEEEEESSHHHH-HHTTTTCT------TEEEEECCTTCHHHHHHHHTTSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCcCEEEEEECCHHHH-HHHHHhcC------CceEEEeecCCHHHHHHHHcCCcEEE
Confidence 4789999999999999999984 6899999999986432 11111000 00000 0011124567889999999
Q ss_pred EcCCCC
Q 020301 242 LHPVLD 247 (328)
Q Consensus 242 l~~plt 247 (328)
.+.|..
T Consensus 74 n~a~~~ 79 (450)
T 1ff9_A 74 SLIPYT 79 (450)
T ss_dssp ECCC--
T ss_pred ECCccc
Confidence 999964
No 297
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.23 E-value=0.0088 Score=55.61 Aligned_cols=95 Identities=12% Similarity=0.185 Sum_probs=60.6
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh----hcCCE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----READV 239 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell----~~aDi 239 (328)
.|+++.|+|.|.||..+++.+ +.+|++|++.+++.... +... +-|..........++.+.+ ...|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~--~~~~-------~lGa~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYA-KAMGLNVVAVDIGDEKL--ELAK-------ELGADLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHH--HHHH-------HTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH--HHHH-------HCCCCEEecCCCccHHHHHHHHhCCCCE
Confidence 478999999999999999985 79999999999876432 1111 1222111011112333322 46899
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|+.++...+. -+..++.|+++..++.++.
T Consensus 234 vid~~g~~~~-----~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 234 AVVTAVSKPA-----FQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EEESSCCHHH-----HHHHHHHEEEEEEEEECCC
T ss_pred EEECCCCHHH-----HHHHHHHhhcCCEEEEecc
Confidence 9988873221 2456677788888877753
No 298
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.22 E-value=0.0086 Score=55.88 Aligned_cols=122 Identities=18% Similarity=0.195 Sum_probs=66.5
Q ss_pred CCEEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
..+|+|||.|.+|..++..++. +..-++..||..... .+.....+.... .-. .+.... .+..+.++.||+|+++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~-~~g~~~dl~~~~-~~~-~~~~i~--~~~~~a~~~aDvVii~ 83 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDK-TKGDAIDLSNAL-PFT-SPKKIY--SAEYSDAKDADLVVIT 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHH-HHHHHHHHHTTG-GGS-CCCEEE--ECCGGGGGGCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchH-hHHHHHHHHHHH-Hhc-CCeEEE--ECCHHHhCCCCEEEEc
Confidence 4689999999999999988642 333489999997532 222111111110 000 111111 1346679999999999
Q ss_pred CCCChhhhcc-------ccH-------HHHhcCCCCcEEEEcCCCcccCHH--HHHHH--HHcCCccEE
Q 020301 244 PVLDKTTYHL-------INK-------ERLATMKKEAILVNCSRGPVIDEV--ALVEH--LKQNPMFRV 294 (328)
Q Consensus 244 ~plt~~t~~l-------i~~-------~~~~~mk~ga~lIN~aRG~~vde~--aL~~a--L~~g~i~ga 294 (328)
.+.. ...++ .|. +.+.+..|++++||+ ...+|.- .+.+. +...++.|.
T Consensus 84 ag~~-~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 84 AGAP-QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA--ANPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC--SSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe--CCcHHHHHHHHHHHcCCCHHHEEEc
Confidence 8743 22221 111 122233689999998 4445443 33333 233356565
No 299
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.22 E-value=0.0058 Score=57.02 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=60.7
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh------c
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (328)
.|++|.|+|.|.||..+++.+ +.+|+ +|++.+++.... ++...+ |..........++.+.+. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~--~~~~~~-------Ga~~~~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVA-KASGAYPVIVSEPSDFRR--ELAKKV-------GADYVINPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHH--HHHHHH-------TCSEEECTTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH--HHHHHh-------CCCEEECCCCcCHHHHHHHHcCCCC
Confidence 789999999999999999985 79999 999999875432 111222 221111111124433332 5
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+|+.++...+. -...++.++++..+++++.
T Consensus 237 ~D~vid~~g~~~~-----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 237 VDVFLEFSGAPKA-----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEEECSCCHHH-----HHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCCHHH-----HHHHHHHHhcCCEEEEEcc
Confidence 8999998873221 2445667777777777753
No 300
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.22 E-value=0.0078 Score=55.95 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=66.4
Q ss_pred CEEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.+|+|||.|.+|..++..++. +..-++..||..... .+.......... .-. .+.... .+..+.++.||+|+++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~-~~g~~~dl~~~~-~~~-~~~~v~--~~~~~a~~~aDvVii~a 80 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDR-TKGDALDLEDAQ-AFT-APKKIY--SGEYSDCKDADLVVITA 80 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH-HHHHHHHHHGGG-GGS-CCCEEE--ECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchH-HHHHHHHHHHHH-Hhc-CCeEEE--ECCHHHhCCCCEEEECC
Confidence 589999999999999988753 333389999997532 222111111111 000 111111 13466799999999998
Q ss_pred CCChhhhcc-------cc-------HHHHhcCCCCcEEEEcCCCcccCH--HHHHHH--HHcCCccEE
Q 020301 245 VLDKTTYHL-------IN-------KERLATMKKEAILVNCSRGPVIDE--VALVEH--LKQNPMFRV 294 (328)
Q Consensus 245 plt~~t~~l-------i~-------~~~~~~mk~ga~lIN~aRG~~vde--~aL~~a--L~~g~i~ga 294 (328)
+.. ...++ .| .+.+....|+++++|++ ..+|. ..+.+. +...++.|.
T Consensus 81 g~~-~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 81 GAP-QKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA--NPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp CC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC--CcHHHHHHHHHHHcCCCHHHEEec
Confidence 743 22221 11 12333347899999984 44444 333333 333356565
No 301
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.21 E-value=0.008 Score=56.38 Aligned_cols=96 Identities=18% Similarity=0.124 Sum_probs=59.7
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccC-CHHH-HhhcCCEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDE-VLREADVIS 241 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~e-ll~~aDiV~ 241 (328)
.|++|.|+|.|.+|...++.+ +.+|++|++.+++.... ++...+ |....-..... ++.+ +....|+|+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qla-k~~Ga~Vi~~~~~~~~~--~~~~~l-------Ga~~v~~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLIS-KAMGAETYVISRSSRKR--EDAMKM-------GADHYIATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSSTTH--HHHHHH-------TCSEEEEGGGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHH--HHHHHc-------CCCEEEcCcCchHHHHHhhcCCCEEE
Confidence 478999999999999999985 78999999999876532 111112 22111111111 3333 224689999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.+++.++ .. .-+..++.++++..++.++
T Consensus 249 d~~g~~~--~~-~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 249 VCASSLT--DI-DFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp ECCSCST--TC-CTTTGGGGEEEEEEEEECC
T ss_pred ECCCCCc--HH-HHHHHHHHhcCCCEEEEec
Confidence 9987521 01 1234566777777777765
No 302
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.19 E-value=0.011 Score=56.51 Aligned_cols=68 Identities=25% Similarity=0.362 Sum_probs=46.4
Q ss_pred EEEEEecCHHHHHHHHHHHhc--------CCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--
Q 020301 167 TVGVIGAGRIGSAYARMMVEG--------FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~--------fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (328)
+|||||+|.||+.-++.+++. -+++|. ++|+++.. .+++.+.|+ .. ..+.+++++|+
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~-a~~~a~~~~-------~~----~~y~d~~~ll~~~ 95 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAM-AERHAAKLG-------AE----KAYGDWRELVNDP 95 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHH-HHHHHHHHT-------CS----EEESSHHHHHHCT
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHH-HHHHHHHcC-------CC----eEECCHHHHhcCC
Confidence 799999999999888776321 146766 56887643 333333332 11 23579999997
Q ss_pred cCCEEEEcCCC
Q 020301 236 EADVISLHPVL 246 (328)
Q Consensus 236 ~aDiV~l~~pl 246 (328)
+.|+|+++.|.
T Consensus 96 ~vD~V~I~tp~ 106 (412)
T 4gqa_A 96 QVDVVDITSPN 106 (412)
T ss_dssp TCCEEEECSCG
T ss_pred CCCEEEECCCc
Confidence 47999999993
No 303
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.19 E-value=0.012 Score=53.89 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=66.1
Q ss_pred CCEEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEE
Q 020301 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (328)
Q Consensus 165 g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (328)
.+++.|+|+ |++|+.+++.+ +..|++++ ..+|.... ....+...+.+++++.. ..|++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l-~~~g~~~v~~VnP~~~g-----------------~~i~G~~vy~sl~el~~~~~~Dv~ 68 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQM-LTYGTKIVAGVTPGKGG-----------------MEVLGVPVYDTVKEAVAHHEVDAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHSCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHH-HHcCCeEEEEECCCCCC-----------------ceECCEEeeCCHHHHhhcCCCCEE
Confidence 467999999 99999999987 46788843 55654310 00112334568999998 89999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCcc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP-VIDEVALVEHLKQNPMF 292 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~-~vde~aL~~aL~~g~i~ 292 (328)
++++|. +.+...+ ++..+. +-. .+|..+-|- .-+++.|.++.++..+.
T Consensus 69 Ii~vp~-~~~~~~~-~ea~~~-Gi~-~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 69 IIFVPA-PAAADAA-LEAAHA-GIP-LIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp EECCCH-HHHHHHH-HHHHHT-TCS-EEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred EEecCH-HHHHHHH-HHHHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 999992 3333433 333332 222 244455452 23456788888775553
No 304
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.18 E-value=0.017 Score=55.07 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=61.2
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh------
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------ 235 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------ 235 (328)
-.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++.... ++...+ |....-.....++.+.+.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~~~~l-------Ga~~vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAIL-KHAGASKVILSEPSEVRR--NLAKEL-------GADHVIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHH--HHHHHH-------TCSEEECTTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH--HHHHHc-------CCCEEEcCCCCCHHHHHHHHhCCC
Confidence 3588999999999999999984 89999 999999876432 222222 222111111123333222
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
..|+|+-++.....+...+.+..+..++++..++.++-
T Consensus 282 g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 282 GAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 49999999874322222121111233388888888863
No 305
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.17 E-value=0.0093 Score=55.99 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=44.1
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhcC--C---CCCccccccCCHHHHhhcCCEE
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKAN--G---EQPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~l~ell~~aDiV 240 (328)
+|||+|+|+||+.+++.+...=++++.+ .|++.... ......++-..... . ....+.....++++++.++|+|
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~-~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYE-AFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHH-HHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHH-HHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 7999999999999999875334688764 45543221 11111100000000 0 0000011123567777899999
Q ss_pred EEcCCCC
Q 020301 241 SLHPVLD 247 (328)
Q Consensus 241 ~l~~plt 247 (328)
+.|.|..
T Consensus 82 ~~aTp~~ 88 (340)
T 1b7g_O 82 VDTTPNG 88 (340)
T ss_dssp EECCSTT
T ss_pred EECCCCc
Confidence 9999844
No 306
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.14 E-value=0.028 Score=50.96 Aligned_cols=106 Identities=15% Similarity=0.183 Sum_probs=67.0
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
.++++.|+|.|.+|+.++..| ...|+ +|.+++|+..+ .++..+.++ . .+. .++. +.++|+|+.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L-~~~G~~~i~v~nRt~~k-a~~la~~~~-------~---~~~--~~~~--~~~~DivIn 181 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAF-KNSGFEKLKIYARNVKT-GQYLAALYG-------Y---AYI--NSLE--NQQADILVN 181 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHH-HHTTCCCEEEECSCHHH-HHHHHHHHT-------C---EEE--SCCT--TCCCSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHH-HHHHHHHcC-------C---ccc--hhhh--cccCCEEEE
Confidence 467899999999999999997 57897 79999998643 222222221 0 111 1222 468999999
Q ss_pred cCCCChhhh-----ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 243 HPVLDKTTY-----HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 243 ~~plt~~t~-----~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
+.|...... -.+..+.| +++.+++|+.-.+ .++.-|..|-+.|
T Consensus 182 aTp~gm~~~~~~~~~~~~~~~l---~~~~~v~DlvY~P-~~T~ll~~A~~~G 229 (271)
T 1npy_A 182 VTSIGMKGGKEEMDLAFPKAFI---DNASVAFDVVAMP-VETPFIRYAQARG 229 (271)
T ss_dssp CSSTTCTTSTTTTSCSSCHHHH---HHCSEEEECCCSS-SSCHHHHHHHHTT
T ss_pred CCCCCccCccccCCCCCCHHHc---CCCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 999654211 11443443 5688999998744 3444344444444
No 307
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.14 E-value=0.029 Score=52.74 Aligned_cols=95 Identities=18% Similarity=0.119 Sum_probs=62.7
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc--cCCHHHHhh-----
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (328)
.|++|.|+|.|.+|...++.+ +.+|+ +|++.+++.... ++... -|....-... ..++.+.+.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~--~~~~~-------lGa~~vi~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGC-HSAGAKRIIAVDLNPDKF--EKAKV-------FGATDFVNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGH--HHHHH-------TTCCEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHH--HHHHH-------hCCceEEeccccchhHHHHHHHHhCC
Confidence 588999999999999999984 89999 899999876542 11112 2321111111 124544443
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCC-cEEEEcCC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~g-a~lIN~aR 273 (328)
..|+|+-++.. +++ -...++.++++ ..+|.++-
T Consensus 262 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 262 GVDFSLECVGN-VGV----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCC-HHH----HHHHHHHhhcCCcEEEEEcC
Confidence 48999998873 222 25677888998 88888763
No 308
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.12 E-value=0.0099 Score=54.09 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=48.2
Q ss_pred CEEEEEe-cCHHHHHHHHHHHhcCCcEEEE-EcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.+|+|+| +|+||+.+++.+.+.=++++.+ +|+...+..-... + +-.+... +.....++++++.++|+|+-+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~---g---el~g~~~-gv~v~~dl~~ll~~~DVVIDf 80 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDA---G---AFLGKQT-GVALTDDIERVCAEADYLIDF 80 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBT---T---TTTTCCC-SCBCBCCHHHHHHHCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccH---H---HHhCCCC-CceecCCHHHHhcCCCEEEEc
Confidence 5899999 9999999999875566898876 6876432100000 0 0001111 333457999999999999988
Q ss_pred CC
Q 020301 244 PV 245 (328)
Q Consensus 244 ~p 245 (328)
.+
T Consensus 81 T~ 82 (272)
T 4f3y_A 81 TL 82 (272)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 309
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.12 E-value=0.0064 Score=56.18 Aligned_cols=98 Identities=12% Similarity=0.201 Sum_probs=56.4
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
.++|+|||.|.+|..+|..++ .-|. +|..+|.... ......+ ... . ... ......++ +.++.||+|++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~-~~g~~~ev~L~Di~~~-~~g~a~d-l~~-~---~~~--~i~~t~d~-~~l~~aD~Vi~ 83 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAIS-AKGIADRLVLLDLSEG-TKGATMD-LEI-F---NLP--NVEISKDL-SASAHSKVVIF 83 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECCC------CHHH-HHH-H---TCT--TEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hcCCCCEEEEEcCCcc-hHHHHHH-Hhh-h---cCC--CeEEeCCH-HHHCCCCEEEE
Confidence 378999999999999998875 3355 9999999864 2111111 110 0 111 11122566 66899999999
Q ss_pred cCCCC----------hhhhccccHHH---HhcCCCCcEEEEcCC
Q 020301 243 HPVLD----------KTTYHLINKER---LATMKKEAILVNCSR 273 (328)
Q Consensus 243 ~~plt----------~~t~~li~~~~---~~~mk~ga~lIN~aR 273 (328)
+.... .++..++ .+. +....|++++||++-
T Consensus 84 aag~~~pG~tR~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 84 TVNSLGSSQSYLDVVQSNVDMF-RALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp CCCC----CCHHHHHHHHHHHH-HHHHHHHHHHTTTCEEEECSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEcCC
Confidence 97321 1111111 222 222248999999876
No 310
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.11 E-value=0.0085 Score=55.86 Aligned_cols=91 Identities=18% Similarity=0.150 Sum_probs=58.7
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++.... ++. ++-|....- .+.+++.+..|+|+-+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~--~~~-------~~lGa~~v~----~~~~~~~~~~D~vid~ 241 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYA-VAMGAEVSVFARNEHKK--QDA-------LSMGVKHFY----TDPKQCKEELDFIIST 241 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHH-HHTTCEEEEECSSSTTH--HHH-------HHTTCSEEE----SSGGGCCSCEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCeEEEEeCCHHHH--HHH-------HhcCCCeec----CCHHHHhcCCCEEEEC
Confidence 478999999999999999985 89999999999876542 122 222322111 2233333378999888
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
+.... .-...++.++++..++.++.
T Consensus 242 ~g~~~-----~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 242 IPTHY-----DLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp CCSCC-----CHHHHHTTEEEEEEEEECCC
T ss_pred CCcHH-----HHHHHHHHHhcCCEEEEECC
Confidence 77431 12445566666666666643
No 311
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.09 E-value=0.0073 Score=51.35 Aligned_cols=95 Identities=17% Similarity=0.182 Sum_probs=60.5
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH-HHHh-----hc
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVL-----RE 236 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell-----~~ 236 (328)
.|+++.|+| .|.||+.+++.+ +..|++|++.+++.... + .. +..+..........+. +++. ..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~-~-~~-------~~~g~~~~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIA-KMIGARIYTTAGSDAKR-E-ML-------SRLGVEYVGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHH-HHHTCEEEEEESSHHHH-H-HH-------HTTCCSEEEETTCSTHHHHHHHHTTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHH-HHcCCEEEEEeCCHHHH-H-HH-------HHcCCCEEeeCCcHHHHHHHHHHhCCCC
Confidence 578999999 699999999986 68899999999875432 1 11 1112211111111122 2222 14
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
.|+|+.+.. .+ .-+..++.|+++..+|+++..
T Consensus 108 ~D~vi~~~g--~~----~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 108 VDVVLNSLA--GE----AIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp EEEEEECCC--TH----HHHHHHHTEEEEEEEEECSCG
T ss_pred CeEEEECCc--hH----HHHHHHHHhccCCEEEEEcCC
Confidence 799988764 22 235678889999999998753
No 312
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.09 E-value=0.025 Score=54.54 Aligned_cols=116 Identities=16% Similarity=0.182 Sum_probs=65.6
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCc--------------hhHHHHHHhhhhhhhhcCCCCCcccc
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQ--------------ATRLEKFVTAYGQFLKANGEQPVTWK 225 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~-~d~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (328)
.++.|+++.|.|+|++|+.+|+.| ...|++|++ .|.+. .+.+.++.+..+ ........
T Consensus 208 ~~l~g~~vaVqG~GnVG~~~a~~L-~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g------~i~~~~~a 280 (421)
T 2yfq_A 208 IKMEDAKIAVQGFGNVGTFTVKNI-ERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANK------TLIGFPGA 280 (421)
T ss_dssp CCGGGSCEEEECCSHHHHHHHHHH-HHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHC------C-------
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcC------CcccCCCc
Confidence 468999999999999999999997 589999994 45541 012222211111 00000000
Q ss_pred ccCCHHHHh-hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 020301 226 RASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (328)
Q Consensus 226 ~~~~l~ell-~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i 291 (328)
...+.++++ ..||+++-|.. .+.|+.+...+++ ..+++-.+-|++- .++- +.|++..+
T Consensus 281 ~~i~~~~~~~~~~DIliP~A~-----~n~i~~~~A~~l~-ak~VvEgAN~P~t-~ea~-~il~~~GI 339 (421)
T 2yfq_A 281 ERITDEEFWTKEYDIIVPAAL-----ENVITGERAKTIN-AKLVCEAANGPTT-PEGD-KVLTERGI 339 (421)
T ss_dssp --------------CEEECSC-----SSCSCHHHHTTCC-CSEEECCSSSCSC-HHHH-HHHHHHTC
T ss_pred eEeCccchhcCCccEEEEcCC-----cCcCCcccHHHcC-CeEEEeCCccccC-HHHH-HHHHHCCC
Confidence 111223433 36999988854 6678888888884 7788888999874 3333 44444334
No 313
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=96.08 E-value=0.54 Score=44.21 Aligned_cols=148 Identities=13% Similarity=0.143 Sum_probs=88.8
Q ss_pred HHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCccccc-ccCCCE--EEEEec---C--H
Q 020301 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGN-LLKGQT--VGVIGA---G--R 175 (328)
Q Consensus 104 ~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~-~l~g~t--vgIiG~---G--~ 175 (328)
.++-.+|+|.|.-... .+. .+++=++.+.+++ |. .+.|++ |+++|= | +
T Consensus 152 lA~~~~vPVINag~g~-HPt--QaLaDl~TI~E~~---------------------g~~~l~glkvvva~vGDl~~~~nr 207 (359)
T 1zq6_A 152 FAKYSPVPVINMETIT-HPC--QELAHALALQEHF---------------------GTPDLRGKKYVLTWTYHPKPLNTA 207 (359)
T ss_dssp HHHHCSSCEEESSSSC-CHH--HHHHHHHHHHHHH---------------------TSSCCTTCEEEEEECCCSSCCCSH
T ss_pred HHHhCCCCEEeCCCCC-CcH--HHHHHHHHHHHHh---------------------CCCcccCCeeEEEEEecccccccc
Confidence 3455679999966544 332 2333333333321 12 378999 999996 3 8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC-chhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCC-----hh
Q 020301 176 IGSAYARMMVEGFKMNLIYYDLY-QATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD-----KT 249 (328)
Q Consensus 176 IG~~vA~~l~~~fg~~V~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt-----~~ 249 (328)
+..+++..+ ..||++|.+..|. .-...+++.+.-.+.++..| .......+++|.++.||+|..-.=.. .+
T Consensus 208 va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~ 283 (359)
T 1zq6_A 208 VANSALTIA-TRMGMDVTLLCPTPDYILDERYMDWAAQNVAESG---GSLQVSHDIDSAYAGADVVYAKSWGALPFFGNW 283 (359)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHS---CEEEEECCHHHHHTTCSEEEEECCCCGGGTTCC
T ss_pred hHHHHHHHH-HHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhcCCCEEEECCccccccCCcc
Confidence 999999986 6899999999886 21111111110000011112 12233469999999999996544211 10
Q ss_pred ----------hhccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 250 ----------TYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 250 ----------t~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
..--++.+.++.+| +++|.-+. ||.=|+.+
T Consensus 284 ~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~e 326 (359)
T 1zq6_A 284 EPEKPIRDQYQHFIVDERKMALTN-NGVFSHCLPLRRNVKATDA 326 (359)
T ss_dssp TTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCSCCCBTTTBCHH
T ss_pred hhhHHHHHHhcCCCCCHHHHHhCC-CCEEECCCCCCCCceeCHH
Confidence 12347899999999 99888764 77666554
No 314
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.08 E-value=0.015 Score=50.58 Aligned_cols=76 Identities=12% Similarity=0.117 Sum_probs=51.2
Q ss_pred cccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCC-CCcc-ccccCCHHHHhhcC
Q 020301 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVT-WKRASSMDEVLREA 237 (328)
Q Consensus 161 ~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~l~ell~~a 237 (328)
..+.|+++.|.|. |.||+.+++.|+ .-|.+|++.+|+..... +.. ..+. .... ... .++.+.+..+
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~-~~G~~V~~~~R~~~~~~-~~~--------~~~~~~~~~~Dl~-~~~~~~~~~~ 85 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELK-NKGHEPVAMVRNEEQGP-ELR--------ERGASDIVVANLE-EDFSHAFASI 85 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSGGGHH-HHH--------HTTCSEEEECCTT-SCCGGGGTTC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHH-hCCCeEEEEECChHHHH-HHH--------hCCCceEEEcccH-HHHHHHHcCC
Confidence 5799999999998 999999999985 67999999999875421 111 1111 1110 111 5677889999
Q ss_pred CEEEEcCCCC
Q 020301 238 DVISLHPVLD 247 (328)
Q Consensus 238 DiV~l~~plt 247 (328)
|+|+.+....
T Consensus 86 D~vi~~ag~~ 95 (236)
T 3e8x_A 86 DAVVFAAGSG 95 (236)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999888754
No 315
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.08 E-value=0.0093 Score=55.48 Aligned_cols=62 Identities=13% Similarity=0.185 Sum_probs=45.6
Q ss_pred CCCEEEEEecCHHHH-HHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc---CC
Q 020301 164 KGQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---AD 238 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~-~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aD 238 (328)
.-.++||||+|.||+ ..++.+.+.-+++|. ++|++... .+...+.+++++++. .|
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~--------------------~g~~~~~~~~~ll~~~~~vD 83 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV--------------------EGVNSYTTIEAMLDAEPSID 83 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC--------------------TTSEEESSHHHHHHHCTTCC
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh--------------------cCCCccCCHHHHHhCCCCCC
Confidence 346899999999998 688876433478865 56776431 112245799999976 89
Q ss_pred EEEEcCC
Q 020301 239 VISLHPV 245 (328)
Q Consensus 239 iV~l~~p 245 (328)
+|+++.|
T Consensus 84 ~V~i~tp 90 (330)
T 4ew6_A 84 AVSLCMP 90 (330)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 9999999
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.07 E-value=0.0091 Score=55.41 Aligned_cols=115 Identities=12% Similarity=0.126 Sum_probs=71.8
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh----cCCE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR----EADV 239 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~----~aDi 239 (328)
.|++|.|+|.|.||...++.+ +.+|++|++.+++.... ++.. +-|....-.....++.+.+. ..|+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~--~~~~-------~lGa~~~i~~~~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYA-RAMGLRVAAVDIDDAKL--NLAR-------RLGAEVAVNARDTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHH-HHTTCEEEEEESCHHHH--HHHH-------HTTCSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeCCHHHH--HHHH-------HcCCCEEEeCCCcCHHHHHHHhCCCCCE
Confidence 578999999999999999985 89999999999876532 1222 22322111111124433333 5799
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCC------------------------cccCHHHHHHHHHcCCccE
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG------------------------PVIDEVALVEHLKQNPMFR 293 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG------------------------~~vde~aL~~aL~~g~i~g 293 (328)
|+.+... +++ -...++.++++..++.++-. ..-+.+.+.+.+++|++.-
T Consensus 236 vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~ 308 (340)
T 3s2e_A 236 VLVTAVS-PKA----FSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKA 308 (340)
T ss_dssp EEESSCC-HHH----HHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCC
T ss_pred EEEeCCC-HHH----HHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCc
Confidence 9888763 221 24556677777777776421 1123456777788887763
No 317
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=96.07 E-value=0.0098 Score=56.29 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=63.9
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
-.++-|+|.|.+|+.+|+.+ +.+|++|.++|+++... + .+-+..+|-+....
T Consensus 199 ~~~L~I~GaGhva~aLa~la-~~lgf~V~v~D~R~~~~--------------------------~-~~~fp~a~~v~~~~ 250 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFA-SNVGFYTVVTDWRPNQC--------------------------E-KHFFPDADEIIVDF 250 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHH-HHHTEEEEEEESCGGGG--------------------------C-GGGCTTCSEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCeEEEECCCcccc--------------------------c-cccCCCceEEecCC
Confidence 35799999999999999995 79999999999875421 1 11244566555444
Q ss_pred CCChhhhccccHHHHhc--CCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 245 VLDKTTYHLINKERLAT--MKKEAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 245 plt~~t~~li~~~~~~~--mk~ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
| .+.+.. +.+++++|=..++.-.|...|..+|++.
T Consensus 251 p----------~~~~~~~~~~~~t~vvv~TH~h~~D~~~L~~aL~~~ 287 (362)
T 3on5_A 251 P----------ADFLRKFLIRPDDFVLIMTHHFQKDQEILHFLLEKE 287 (362)
T ss_dssp H----------HHHHHHSCCCTTCEEEECCSCHHHHHHHHHHHSSSC
T ss_pred H----------HHHHhhcCCCCCeEEEEEeCCchhhHHHHHHHhcCC
Confidence 4 233343 5678888888899889999999888763
No 318
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.06 E-value=0.017 Score=56.09 Aligned_cols=119 Identities=14% Similarity=0.144 Sum_probs=71.1
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEc--------CCch--hHHHHHHhhh-------hhhhhcCCCCCcc
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYD--------LYQA--TRLEKFVTAY-------GQFLKANGEQPVT 223 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d--------~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~ 223 (328)
.++.|+|+.|=|+|++|+.+|+.| ...|++|++.+ +.-- ..+....+.. .......+..
T Consensus 231 ~~l~Gk~vaVQG~GnVG~~aa~~L-~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~--- 306 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGNVAQYAIEKA-MEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLV--- 306 (450)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCE---
T ss_pred CCcCCCEEEEeCCChHHHHHHHHH-HhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcE---
Confidence 468999999999999999999997 68999998754 2210 1111111000 0000000100
Q ss_pred ccccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCC--cEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 224 WKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKE--AILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 224 ~~~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~g--a~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
.....++ +-..||+++-| .+.+.||.+...+++.+ .++++-|-+.+-.+ | .+.|.+..|.
T Consensus 307 ~~~~~~i--~~~~~DI~iPc-----Al~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl 368 (450)
T 4fcc_A 307 YLEGQQP--WSVPVDIALPC-----ATQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVL 368 (450)
T ss_dssp EEETCCG--GGSCCSEEEEC-----SCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCE
T ss_pred EecCccc--ccCCccEEeec-----cccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCE
Confidence 0001111 22369999877 34678999988888754 58888888886443 3 2556665554
No 319
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.05 E-value=0.0069 Score=56.96 Aligned_cols=66 Identities=15% Similarity=0.159 Sum_probs=46.3
Q ss_pred CEEEEEecCHHHHH-HHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEEE
Q 020301 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (328)
Q Consensus 166 ~tvgIiG~G~IG~~-vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (328)
.++||||+|.||+. .++.+.+.-+++|. ++|+++.... +.| + ....+.+++++++. .|+|+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~----~~~-------~----~~~~~~~~~~ll~~~~vD~V~ 70 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK----ERY-------P----QASIVRSFKELTEDPEIDLIV 70 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG----TTC-------T----TSEEESCSHHHHTCTTCCEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH----HhC-------C----CCceECCHHHHhcCCCCCEEE
Confidence 47999999999997 67765333378876 6788754311 111 1 12345799999987 89999
Q ss_pred EcCCC
Q 020301 242 LHPVL 246 (328)
Q Consensus 242 l~~pl 246 (328)
+|.|.
T Consensus 71 i~tp~ 75 (362)
T 3fhl_A 71 VNTPD 75 (362)
T ss_dssp ECSCG
T ss_pred EeCCh
Confidence 99994
No 320
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.04 E-value=0.025 Score=54.77 Aligned_cols=87 Identities=13% Similarity=0.211 Sum_probs=64.6
Q ss_pred ccCCCEEEEEecC----------HHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH
Q 020301 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (328)
Q Consensus 162 ~l~g~tvgIiG~G----------~IG~~vA~~l~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (328)
.+.|++|+|+|+- +-...+++.| ... |++|.+|||..... ....++
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L-~~~~g~~V~~~DP~~~~~----------------------~~~~~~ 368 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELL-NQEPDIEVCAYDPHVELD----------------------FVEHDM 368 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHH-HHSTTCEEEEECSSCCCT----------------------TBCSTT
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHH-HhhcCCEEEEECCCcccc----------------------cccCCH
Confidence 4789999999984 3467889987 577 99999999976421 123578
Q ss_pred HHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc
Q 020301 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 231 ~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
++.++.||.|+++.+ -++.+. ++-+.++.|+ +.+++++ |+-
T Consensus 369 ~~~~~~ad~vvi~t~-~~~f~~-~d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 369 SHAVKDASLVLILSD-HSEFKN-LSDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp HHHHTTCSEEEECSC-CGGGTS-CCGGGGTTCS-SCEEEES-SCC
T ss_pred HHHHhCCCEEEEecC-CHHHhc-cCHHHHHhCC-CCEEEEC-CCC
Confidence 999999999999987 344444 4555567787 6788886 543
No 321
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.04 E-value=0.025 Score=54.54 Aligned_cols=115 Identities=18% Similarity=0.249 Sum_probs=73.4
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCc---------hhHHHHHHhhhhhhhhcCC-CCCccccccCC
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQ---------ATRLEKFVTAYGQFLKANG-EQPVTWKRASS 229 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 229 (328)
.++.|+|+.|-|+|++|+.+|+.| ...|++|+ +.|.+- ...+.++. +..+ ..... ....+
T Consensus 217 ~~l~g~~vaVqG~GnVG~~aa~~l-~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~-------~~~g~i~~~~-a~~~~ 287 (424)
T 3k92_A 217 IKLQNARIIIQGFGNAGSFLAKFM-HDAGAKVIGISDANGGLYNPDGLDIPYLLDKR-------DSFGMVTNLF-TDVIT 287 (424)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHH-HHHTCEEEEEECSSCEEECTTCCCHHHHHHHC-------CSSSCCGGGC-SCCBC
T ss_pred CCcccCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCcEECCCCCCHHHHHHHH-------HHhCCCCCCC-cEEec
Confidence 468999999999999999999997 57899986 445441 11111111 1111 11111 11234
Q ss_pred HHHHh-hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 230 l~ell-~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
-++++ ..||+++-|.. .+.|+.+...+++ -.+++-.+-+++- .+| .+.|.+..|.
T Consensus 288 ~~~i~~~~~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~t-~eA-~~iL~~rGI~ 343 (424)
T 3k92_A 288 NEELLEKDCDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPTT-IDA-TKILNERGVL 343 (424)
T ss_dssp HHHHHHSCCSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHH-HHHHHHTTCE
T ss_pred CccceeccccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCCC-HHH-HHHHHHCCCE
Confidence 45654 46999987754 5778888888884 6688888999863 433 4566665553
No 322
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.01 E-value=0.0098 Score=55.60 Aligned_cols=68 Identities=18% Similarity=0.282 Sum_probs=45.5
Q ss_pred CEEEEEecCHHHH-HHHHHHHhcC-CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEE
Q 020301 166 QTVGVIGAGRIGS-AYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (328)
Q Consensus 166 ~tvgIiG~G~IG~-~vA~~l~~~f-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (328)
.++||||+|.||+ ..++.+ +.. +++|. ++|++.. +++.+.|+ .. +...+.++++++.. .|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~---~~~a~~~~-------~~--~~~~~~~~~~ll~~~~~D~V 69 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYV-MIRETLEVKTIFDLHVN---EKAAAPFK-------EK--GVNFTADLNELLTDPEIELI 69 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHH-TTCTTEEEEEEECTTCC---HHHHHHHH-------TT--TCEEESCTHHHHSCTTCCEE
T ss_pred eEEEEEccCHHHHHHHHHHH-hhCCCeEEEEEECCCHH---HHHHHhhC-------CC--CCeEECCHHHHhcCCCCCEE
Confidence 3799999999999 566765 344 78875 6787722 22222211 00 12245799999986 8999
Q ss_pred EEcCCC
Q 020301 241 SLHPVL 246 (328)
Q Consensus 241 ~l~~pl 246 (328)
+++.|.
T Consensus 70 ~i~tp~ 75 (349)
T 3i23_A 70 TICTPA 75 (349)
T ss_dssp EECSCG
T ss_pred EEeCCc
Confidence 999994
No 323
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.01 E-value=0.0056 Score=55.81 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=36.1
Q ss_pred ccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 160 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
..++.|++|.|||.|.+|.+.++.| ...|++|.++++...
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~L-l~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKL-MPTGCKLTLVSPDLH 47 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHH-GGGTCEEEEEEEEEC
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHH-HhCCCEEEEEcCCCC
Confidence 4578999999999999999999997 689999999998764
No 324
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.01 E-value=0.028 Score=52.88 Aligned_cols=94 Identities=17% Similarity=0.124 Sum_probs=61.6
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc--cCCHHHHhh-----
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (328)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++.... ++.. +-|....-... ..++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~--~~~~-------~lGa~~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKF--AKAK-------EVGATECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGH--HHHH-------HTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHH--HHHH-------HhCCceEecccccchhHHHHHHHHhCC
Confidence 578999999999999999985 79999 899999876542 1111 22321111111 123444433
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCC-cEEEEcC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCS 272 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~g-a~lIN~a 272 (328)
..|+|+-++.. +++ -...++.++++ ..++.++
T Consensus 261 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 261 GVDFSFEVIGR-LDT----MVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHHBCTTTCEEEECS
T ss_pred CCcEEEECCCC-HHH----HHHHHHHhhcCCcEEEEec
Confidence 47999998873 222 24567788888 8888775
No 325
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.01 E-value=0.039 Score=53.70 Aligned_cols=96 Identities=15% Similarity=0.154 Sum_probs=66.4
Q ss_pred cccCCCEEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH
Q 020301 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (328)
Q Consensus 161 ~~l~g~tvgIiG~G----------~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (328)
..+.|++|+|+|+- .=...+++.| ...|++|.+|||...+.... .|+ .......++
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~~----------~~~~~~~~~ 379 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKL-LEVGCRVRVYDPVAMKEAQK---RLG----------DKVEYTTDM 379 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSCHHHHHH---HHG----------GGSEECSSH
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCcHHHHH---hcC----------ccceecCCH
Confidence 46899999999984 3467889987 68999999999987532211 121 011234688
Q ss_pred HHHhhcCCEEEEcCCCChhhhccccHHHH-hcCCCCcEEEEcCCC
Q 020301 231 DEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRG 274 (328)
Q Consensus 231 ~ell~~aDiV~l~~plt~~t~~li~~~~~-~~mk~ga~lIN~aRG 274 (328)
++.++.||.|+++.+ -++.+. ++-+.+ +.|+ +.+++++ |+
T Consensus 380 ~~~~~~ad~~vi~t~-~~~f~~-~~~~~~~~~~~-~~~i~D~-r~ 420 (450)
T 3gg2_A 380 YDAVRGAEALFHVTE-WKEFRM-PDWSALSQAMA-ASLVIDG-RN 420 (450)
T ss_dssp HHHTTTCSCEEECSC-CGGGSS-CCHHHHHHHSS-SCEEEES-SC
T ss_pred HHHhcCCCEEEEccC-CHHHhh-cCHHHHHHhcC-CCEEEEC-CC
Confidence 999999999999987 344444 454444 4566 6688986 54
No 326
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=96.00 E-value=0.012 Score=55.14 Aligned_cols=32 Identities=25% Similarity=0.410 Sum_probs=25.4
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY 198 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~ 198 (328)
+|||+|+|+||+.+.|.+...-.++|.+.+-.
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain~~ 34 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDL 34 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 79999999999999998643346888766543
No 327
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.98 E-value=0.021 Score=53.14 Aligned_cols=68 Identities=16% Similarity=0.253 Sum_probs=48.2
Q ss_pred CEEEEEecC-HHHHHHHHHHHhcC--CcEE-EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCE
Q 020301 166 QTVGVIGAG-RIGSAYARMMVEGF--KMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (328)
Q Consensus 166 ~tvgIiG~G-~IG~~vA~~l~~~f--g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (328)
.++||||+| .+|+..++.+ +.. ++++ .++|+++.. .+++.+.| +. ...+.+++++++ +.|+
T Consensus 19 irvgiIG~G~~~g~~~~~~l-~~~~~~~~lvav~d~~~~~-~~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~ 85 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPAL-KNLSHLFEITAVTSRTRSH-AEEFAKMV-------GN----PAVFDSYEELLESGLVDA 85 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTTTTTEEEEEEECSSHHH-HHHHHHHH-------SS----CEEESCHHHHHHSSCCSE
T ss_pred eeEEEEecCHHHHHHHHHHH-HhCCCceEEEEEEcCCHHH-HHHHHHHh-------CC----CcccCCHHHHhcCCCCCE
Confidence 479999999 8999999987 454 6776 577887643 23333333 11 123579999997 5899
Q ss_pred EEEcCCC
Q 020301 240 ISLHPVL 246 (328)
Q Consensus 240 V~l~~pl 246 (328)
|+++.|.
T Consensus 86 V~i~tp~ 92 (340)
T 1zh8_A 86 VDLTLPV 92 (340)
T ss_dssp EEECCCG
T ss_pred EEEeCCc
Confidence 9999993
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.98 E-value=0.008 Score=56.73 Aligned_cols=93 Identities=18% Similarity=0.307 Sum_probs=59.6
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC---HHHHhhcCCEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (328)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++.... ++...+ |.... ....+ .+++....|+|
T Consensus 194 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~Vi~~~~~~~~~--~~a~~l-------Ga~~v--i~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLA-HAMGAHVVAFTTSEAKR--EAAKAL-------GADEV--VNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSGGGH--HHHHHH-------TCSEE--EETTCHHHHHTTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH--HHHHHc-------CCcEE--eccccHHHHHHhhcCCCEE
Confidence 478999999999999999984 89999999999876542 111122 22111 01111 22333568999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
+-++..... -+..++.++++..+|.++.
T Consensus 262 id~~g~~~~-----~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 262 LNTVAAPHN-----LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EECCSSCCC-----HHHHHTTEEEEEEEEECCC
T ss_pred EECCCCHHH-----HHHHHHHhccCCEEEEecc
Confidence 988874221 2455677777777777653
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.98 E-value=0.027 Score=52.97 Aligned_cols=94 Identities=15% Similarity=0.042 Sum_probs=61.4
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc--cCCHHHHhh-----
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (328)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++.... ++.. +-|....-... ..++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~a~-------~lGa~~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGC-KAAGASRIIGVGTHKDKF--PKAI-------ELGATECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECSCGGGH--HHHH-------HTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEECCCHHHH--HHHH-------HcCCcEEEecccccchHHHHHHHHhCC
Confidence 578999999999999999984 78999 899999876542 1112 22322111111 023444333
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCC-cEEEEcC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCS 272 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~g-a~lIN~a 272 (328)
..|+|+-++.. +++ -...++.++++ ..+|.++
T Consensus 261 g~Dvvid~~g~-~~~----~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 261 GVDYAVECAGR-IET----MMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECC
T ss_pred CCCEEEECCCC-HHH----HHHHHHHHhcCCCEEEEEc
Confidence 48999988863 222 25667888888 8888775
No 330
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.97 E-value=0.03 Score=50.77 Aligned_cols=119 Identities=18% Similarity=0.133 Sum_probs=76.8
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
.++.|+++.|+|.|-.+++++-.| ...|+ +|.+++|+..+. ++..+.++.. . ..... ....+.++++|+
T Consensus 121 ~~~~~~~~lilGaGGaarai~~aL-~~~g~~~i~i~nRt~~ra-~~la~~~~~~----~-~~~~~---~~~~~~~~~~dl 190 (269)
T 3tum_A 121 FEPAGKRALVIGCGGVGSAIAYAL-AEAGIASITLCDPSTARM-GAVCELLGNG----F-PGLTV---STQFSGLEDFDL 190 (269)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHH-HHHHHHHHHH----C-TTCEE---ESCCSCSTTCSE
T ss_pred CCcccCeEEEEecHHHHHHHHHHH-HHhCCCeEEEeCCCHHHH-HHHHHHHhcc----C-Cccee---hhhhhhhhcccc
Confidence 357899999999999999999987 46775 899999987542 2222222111 0 00001 112234578999
Q ss_pred EEEcCCCChhhh--ccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 240 ISLHPVLDKTTY--HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 240 V~l~~plt~~t~--~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
|+.+.|..-... --++...++.++++.++.++.=.+ ..+.=|.+|-+.|.
T Consensus 191 iiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~P-~~T~ll~~A~~~G~ 242 (269)
T 3tum_A 191 VANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSP-EITPLLNRARQVGC 242 (269)
T ss_dssp EEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCSS-SSCHHHHHHHHHTC
T ss_pred cccCCccccCCCCCCCCChHHHhccCCCcEEEEEccCC-CCCHHHHHHHHCcC
Confidence 999999653322 236777888899999999885443 34555555655553
No 331
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.97 E-value=0.035 Score=51.68 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=61.4
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc--cCCHHHH---h----
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEV---L---- 234 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~el---l---- 234 (328)
.|++|.|+|.|.+|...++.+ +.+|++|++.+++.... ++...+ |....-... ....+++ .
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~--~~~~~l-------Ga~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAA-KAYGAFVVCTARSPRRL--EVAKNC-------GADVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH--HHHHHT-------TCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEcCCHHHH--HHHHHh-------CCCEEEcCcccccHHHHHHHHhcccc
Confidence 478999999999999999985 79999999999876432 111222 221111001 1112232 3
Q ss_pred -hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 235 -READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 235 -~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
...|+|+.++.. +.+ -...++.++++..+|.++-
T Consensus 238 g~g~D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 238 GDLPNVTIDCSGN-EKC----ITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SSCCSEEEECSCC-HHH----HHHHHHHSCTTCEEEECSC
T ss_pred CCCCCEEEECCCC-HHH----HHHHHHHHhcCCEEEEEec
Confidence 258999998873 221 2456788899999988864
No 332
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.96 E-value=0.011 Score=55.64 Aligned_cols=94 Identities=19% Similarity=0.203 Sum_probs=61.2
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc------
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE------ 236 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~------ 236 (328)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++.... ++...+ |..........++.+.+.+
T Consensus 182 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~a~~l-------Ga~~vi~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLA-RLAGATTVILSTRQATKR--RLAEEV-------GATATVDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHH--HHHHHH-------TCSEEECTTSSCHHHHHHSTTSSST
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH--HHHHHc-------CCCEEECCCCcCHHHHHHhhhhccC
Confidence 478999999999999999984 89999 899999876432 222222 3221111122345444443
Q ss_pred --CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 237 --ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 237 --aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.|+|+-++.. +++ -...++.++++..++.++
T Consensus 252 gg~Dvvid~~G~-~~~----~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 252 GGVDVVIECAGV-AET----VKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TCEEEEEECSCC-HHH----HHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEECCCC-HHH----HHHHHHHhccCCEEEEEe
Confidence 7999988762 221 245667778888887775
No 333
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.93 E-value=0.03 Score=50.85 Aligned_cols=109 Identities=16% Similarity=0.186 Sum_probs=65.1
Q ss_pred cccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccc-cccC---CHHHHhh
Q 020301 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRAS---SMDEVLR 235 (328)
Q Consensus 161 ~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~l~ell~ 235 (328)
.++.||++.|.|. |-||+++|+.|+ .-|++|++.+++.....+...+. .+..+...... .... +++++++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFA-KEGANIAIAYLDEEGDANETKQY----VEKEGVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHH----HHTTTCCEEEEESCTTSHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHH----HHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 4689999999997 679999999985 77999999998865432221111 11111110000 0112 2334443
Q ss_pred -------cCCEEEEcCCCCh----------h-hhc----------cccHHHHhcCCCCcEEEEcCCC
Q 020301 236 -------EADVISLHPVLDK----------T-TYH----------LINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 236 -------~aDiV~l~~plt~----------~-t~~----------li~~~~~~~mk~ga~lIN~aRG 274 (328)
.-|+++.+.-... + -.. .+.+..+..|+++..+||++..
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~ 184 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI 184 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence 6799988753221 1 001 1235567788888899999864
No 334
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.92 E-value=0.019 Score=53.96 Aligned_cols=113 Identities=20% Similarity=0.244 Sum_probs=64.2
Q ss_pred cCCCEEEEEec-CHHHHHHHHHHHhcCC--cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 163 LKGQTVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 163 l~g~tvgIiG~-G~IG~~vA~~l~~~fg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
+.+++|+|||. |.+|+.+|..++ .+| -+|..+|...... +....... +............++.+.++.||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~-~~g~~~evvLiDi~~~k~-~g~a~DL~----~~~~~~~~i~~t~d~~~al~dADv 79 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAA-MMRLTPNLCLYDPFAVGL-EGVAEEIR----HCGFEGLNLTFTSDIKEALTDAKY 79 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHH-HTTCCSCEEEECSCHHHH-HHHHHHHH----HHCCTTCCCEEESCHHHHHTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-hcCCCCEEEEEeCCchhH-HHHHHhhh----hCcCCCCceEEcCCHHHHhCCCCE
Confidence 45789999998 999999998763 555 4899999875421 21111111 101111112223578888999999
Q ss_pred EEEcCCCChhhhcc-----c--cH-------HHHhcCCCCcE-EEEcCCCcccCHHHHHH
Q 020301 240 ISLHPVLDKTTYHL-----I--NK-------ERLATMKKEAI-LVNCSRGPVIDEVALVE 284 (328)
Q Consensus 240 V~l~~plt~~t~~l-----i--~~-------~~~~~mk~ga~-lIN~aRG~~vde~aL~~ 284 (328)
|+++.. ++...++ + |. +.+.+..|+++ +++++ ..+|.-..+-
T Consensus 80 VvitaG-~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs--NPvd~~t~i~ 136 (343)
T 3fi9_A 80 IVSSGG-APRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF--NPADITGLVT 136 (343)
T ss_dssp EEECCC--------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS--SSHHHHHHHH
T ss_pred EEEccC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec--CchHHHHHHH
Confidence 999864 2322221 1 11 12233347785 88985 5666555443
No 335
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.92 E-value=0.02 Score=52.83 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=69.7
Q ss_pred cccCCCEEEEE-ec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--
Q 020301 161 NLLKGQTVGVI-GA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (328)
Q Consensus 161 ~~l~g~tvgIi-G~-G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (328)
.-+..+++.|| |+ |+.|+.+++.+ +.+|++++ ..+|.... ..-.+...+.+++|+.+
T Consensus 9 ~l~~~~siaVV~Gasg~~G~~~~~~l-~~~G~~~v~~VnP~~~g-----------------~~i~G~~vy~sl~el~~~~ 70 (305)
T 2fp4_A 9 LYVDKNTKVICQGFTGKQGTFHSQQA-LEYGTNLVGGTTPGKGG-----------------KTHLGLPVFNTVKEAKEQT 70 (305)
T ss_dssp GCCCTTCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHH
T ss_pred HHhCCCcEEEEECCCCCHHHHHHHHH-HHCCCcEEEEeCCCcCc-----------------ceECCeeeechHHHhhhcC
Confidence 34667889999 99 99999999987 57888843 45554210 00112334568999988
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcC-Ccc
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQN-PMF 292 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~aL~~g-~i~ 292 (328)
..|++++++|. +.....+ ++..+. .- ..+|+.+-|-- -|+..|.+..++. .+.
T Consensus 71 ~vD~avI~vP~-~~~~~~~-~e~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 71 GATASVIYVPP-PFAAAAI-NEAIDA-EV-PLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp CCCEEEECCCH-HHHHHHH-HHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred CCCEEEEecCH-HHHHHHH-HHHHHC-CC-CEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 89999999992 2333433 333332 11 24466766643 2344788888876 444
No 336
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.91 E-value=0.035 Score=52.16 Aligned_cols=94 Identities=16% Similarity=0.068 Sum_probs=61.1
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc--cCCHHHHhh-----
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (328)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++.... ++...+ |....-... ..++.+.+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~a~~l-------Ga~~vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKF--PKAKAL-------GATDCLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGH--HHHHHT-------TCSEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHH--HHHHHh-------CCcEEEccccccchHHHHHHHHhCC
Confidence 588999999999999999984 89999 899999876542 111222 322111111 123444333
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCC-cEEEEcC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCS 272 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~g-a~lIN~a 272 (328)
..|+|+-++.. +++ -...++.++++ ..++.++
T Consensus 265 g~Dvvid~~G~-~~~----~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 265 GVDYSLDCAGT-AQT----LKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp CBSEEEESSCC-HHH----HHHHHHTBCTTTCEEEECC
T ss_pred CccEEEECCCC-HHH----HHHHHHHhhcCCCEEEEEC
Confidence 48999988763 222 24667888888 7777765
No 337
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.90 E-value=0.0074 Score=58.16 Aligned_cols=39 Identities=21% Similarity=0.452 Sum_probs=34.9
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchh
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~ 201 (328)
-+.|++|+|+|-|.+|+.+++.+ +.+|.+|+++|+++..
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa-~~lG~~v~v~d~~~~~ 70 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAA-QSMGYRVAVLDPDPAS 70 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCcC
Confidence 46899999999999999999995 7999999999987654
No 338
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.90 E-value=0.017 Score=52.38 Aligned_cols=80 Identities=13% Similarity=0.139 Sum_probs=51.0
Q ss_pred ccCCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCc--cccccCCHHHHhhcCC
Q 020301 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREAD 238 (328)
Q Consensus 162 ~l~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aD 238 (328)
++.|+++.|+| .|-||+.+++.| ...|++|++++|+... .++..+.+.. ..+.... ......+++++++++|
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L-~~~G~~V~i~~R~~~~-~~~l~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~D 190 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALL-AGEGAEVVLCGRKLDK-AQAAADSVNK---RFKVNVTAAETADDASRAEAVKGAH 190 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHH-HHHHHHHHHH---HHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHH-HHCcCEEEEEECCHHH-HHHHHHHHHh---cCCcEEEEecCCCHHHHHHHHHhCC
Confidence 46789999999 999999999997 4779999999998643 2222221110 0011111 0111123566778889
Q ss_pred EEEEcCCC
Q 020301 239 VISLHPVL 246 (328)
Q Consensus 239 iV~l~~pl 246 (328)
+|+.+.+.
T Consensus 191 vlVn~ag~ 198 (287)
T 1lu9_A 191 FVFTAGAI 198 (287)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99888864
No 339
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.88 E-value=0.029 Score=52.99 Aligned_cols=96 Identities=13% Similarity=0.248 Sum_probs=55.7
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCC--CCccccccCCHHHHhhcCCEE
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADVI 240 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~aDiV 240 (328)
...+|||+| +|.||+.+++.|...=.+++.+........ .++.+.|+.+ . +. ... ...+ ++.+..+|+|
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~-~--~~v~~dl---~~~~-~~~~~~vDvV 86 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHL-R--AQKLPTL---VSVK-DADFSTVDAV 86 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGG-T--TSCCCCC---BCGG-GCCGGGCSEE
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchh-c--Ccccccc---eecc-hhHhcCCCEE
Confidence 346899999 999999999997533346887775433211 1111122111 1 10 011 1112 4566789999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
++|+|.... .+.....+.|+.+|+.+-
T Consensus 87 f~atp~~~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 87 FCCLPHGTT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp EECCCTTTH------HHHHHTSCTTCEEEECSS
T ss_pred EEcCCchhH------HHHHHHHhCCCEEEECCc
Confidence 999984322 222222267899999875
No 340
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.87 E-value=0.018 Score=54.82 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=49.6
Q ss_pred CCEEEEEecCH---HHHHHHHHHHhcCCcEEE--EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc---
Q 020301 165 GQTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--- 236 (328)
Q Consensus 165 g~tvgIiG~G~---IG~~vA~~l~~~fg~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--- 236 (328)
-.++||||+|. ||+..+..+...-++++. ++|+++... ++..+.| +... ...+.+++++++.
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~~-------g~~~--~~~~~~~~~ll~~~~~ 81 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRG-SAFGEQL-------GVDS--ERCYADYLSMFEQEAR 81 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHH-HHHHHHT-------TCCG--GGBCSSHHHHHHHHTT
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHH-HHHHHHh-------CCCc--ceeeCCHHHHHhcccc
Confidence 45899999999 999988876433347877 468876532 2222222 2211 1245799999986
Q ss_pred ----CCEEEEcCCCC
Q 020301 237 ----ADVISLHPVLD 247 (328)
Q Consensus 237 ----aDiV~l~~plt 247 (328)
.|+|+++.|..
T Consensus 82 ~~~~vD~V~i~tp~~ 96 (398)
T 3dty_A 82 RADGIQAVSIATPNG 96 (398)
T ss_dssp CTTCCSEEEEESCGG
T ss_pred cCCCCCEEEECCCcH
Confidence 89999999943
No 341
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.87 E-value=0.02 Score=53.65 Aligned_cols=80 Identities=18% Similarity=0.176 Sum_probs=44.2
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEE-cCCchhHHHHHHh-----hhhhhhhcC-CCCCccccccCCHHHHhhcCCE
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYY-DLYQATRLEKFVT-----AYGQFLKAN-GEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~-d~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~l~ell~~aDi 239 (328)
+|||+|+|.||+.+++.+...-++++.+. |+.+... ..... .|+.+.... ........-..+.++++..+|+
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~-~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFE-ARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHH-HHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHH-HHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 79999999999999998754357887654 5442211 11110 000000000 0000000001256788889999
Q ss_pred EEEcCCCC
Q 020301 240 ISLHPVLD 247 (328)
Q Consensus 240 V~l~~plt 247 (328)
|+.|.|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999843
No 342
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.86 E-value=0.031 Score=52.42 Aligned_cols=94 Identities=17% Similarity=0.128 Sum_probs=61.7
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc--cCCHHHHhh-----
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (328)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++.... ++...+ |....-... ..++.+.+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla-~~~Ga~~Vi~~~~~~~~~--~~~~~l-------Ga~~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGC-KVAGASRIIGVDINKDKF--ARAKEF-------GATECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECSCGGGH--HHHHHH-------TCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHH--HHHHHc-------CCceEeccccccccHHHHHHHHhCC
Confidence 578999999999999999984 78999 899999876542 112222 221111111 123444333
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCC-cEEEEcC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCS 272 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~g-a~lIN~a 272 (328)
..|+|+-++.. +++ -...++.++++ ..+|.++
T Consensus 260 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 260 GVDYSFECIGN-VKV----MRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEECCCc-HHH----HHHHHHhhccCCcEEEEEe
Confidence 48999998873 222 25667888988 8888776
No 343
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.85 E-value=0.031 Score=52.55 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=47.3
Q ss_pred CCEEEEEecCHHHH-HHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEE
Q 020301 165 GQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (328)
Q Consensus 165 g~tvgIiG~G~IG~-~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (328)
-.++||||+|.+|. .++..+ +.-++++. ++|+++.. .+++.+.| +. ...+.+++++++. .|+|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~-~~~~~~lvav~d~~~~~-a~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~V 92 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCL-LRAGARLAGFHEKDDAL-AAEFSAVY-------AD----ARRIATAEEILEDENIGLI 92 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHH-HHTTCEEEEEECSCHHH-HHHHHHHS-------SS----CCEESCHHHHHTCTTCCEE
T ss_pred CcEEEEECcCHHHHHHHHHHh-hcCCcEEEEEEcCCHHH-HHHHHHHc-------CC----CcccCCHHHHhcCCCCCEE
Confidence 35899999999995 466665 45688855 67887643 22322222 11 1235799999986 8999
Q ss_pred EEcCCC
Q 020301 241 SLHPVL 246 (328)
Q Consensus 241 ~l~~pl 246 (328)
+++.|.
T Consensus 93 ~I~tp~ 98 (361)
T 3u3x_A 93 VSAAVS 98 (361)
T ss_dssp EECCCH
T ss_pred EEeCCh
Confidence 999993
No 344
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.82 E-value=0.0068 Score=53.09 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=44.6
Q ss_pred CEEEEEecCHHHHHHHHHH-HhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-cCCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMM-VEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l-~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV~l 242 (328)
++++|||.|.+|+.+|+.+ ... |+++. ++|.++...- +. ..........+++++++ ..|+|++
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g-----------~~--i~gv~V~~~~dl~ell~~~ID~ViI 146 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVG-----------RP--VRGGVIEHVDLLPQRVPGRIEIALL 146 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTT-----------CE--ETTEEEEEGGGHHHHSTTTCCEEEE
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHh-----------hh--hcCCeeecHHhHHHHHHcCCCEEEE
Confidence 4799999999999999852 134 88866 5576654310 00 01112223568899887 5899999
Q ss_pred cCCC
Q 020301 243 HPVL 246 (328)
Q Consensus 243 ~~pl 246 (328)
++|.
T Consensus 147 A~Ps 150 (211)
T 2dt5_A 147 TVPR 150 (211)
T ss_dssp CSCH
T ss_pred eCCc
Confidence 9994
No 345
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.82 E-value=0.014 Score=54.63 Aligned_cols=69 Identities=12% Similarity=0.147 Sum_probs=45.5
Q ss_pred CEEEEEecCHHHHHHHHHHHh--c-----CCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc-
Q 020301 166 QTVGVIGAGRIGSAYARMMVE--G-----FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE- 236 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~--~-----fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~- 236 (328)
-+|||||+|.||+.-++.+++ . .+++|. ++|+++.. .++..+.| +.. ..+.+++++|+.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~-a~~~a~~~-------g~~----~~~~d~~~ll~~~ 74 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEA-VRAAAGKL-------GWS----TTETDWRTLLERD 74 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHH-HHHHHHHH-------TCS----EEESCHHHHTTCT
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHH-HHHHHHHc-------CCC----cccCCHHHHhcCC
Confidence 479999999999987766532 1 134654 66887643 23333333 211 235799999965
Q ss_pred -CCEEEEcCCC
Q 020301 237 -ADVISLHPVL 246 (328)
Q Consensus 237 -aDiV~l~~pl 246 (328)
.|+|+++.|.
T Consensus 75 ~iDaV~I~tP~ 85 (390)
T 4h3v_A 75 DVQLVDVCTPG 85 (390)
T ss_dssp TCSEEEECSCG
T ss_pred CCCEEEEeCCh
Confidence 7999999994
No 346
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.82 E-value=0.02 Score=53.45 Aligned_cols=95 Identities=17% Similarity=0.133 Sum_probs=60.9
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc---cCCH-HHHh----
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSM-DEVL---- 234 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l-~ell---- 234 (328)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++.... ++.. +-|....-... ..++ +++.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~a~-------~lGa~~vi~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVA-KAMGAAQVVVTDLSATRL--SKAK-------EIGADLVLQISKESPQEIARKVEGQLG 240 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEESCHHHH--HHHH-------HTTCSEEEECSSCCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH--HHHH-------HhCCCEEEcCcccccchHHHHHHHHhC
Confidence 478999999999999999984 79999 999999876432 1112 22321110000 0111 1222
Q ss_pred hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 235 ~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
...|+|+-++.. +.+ -...++.++++..++.++-
T Consensus 241 ~g~D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 241 CKPEVTIECTGA-EAS----IQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SCCSEEEECSCC-HHH----HHHHHHHSCTTCEEEECSC
T ss_pred CCCCEEEECCCC-hHH----HHHHHHHhcCCCEEEEEec
Confidence 258999998873 221 2456788899999988864
No 347
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.81 E-value=0.011 Score=53.89 Aligned_cols=93 Identities=16% Similarity=0.116 Sum_probs=60.3
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcccccc-CCHHHHhhcCCEEE
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SSMDEVLREADVIS 241 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ell~~aDiV~ 241 (328)
.|+++.|+|. |.+|..+++.+ +.+|++|++.+++.... +. +++-|......... .++.+.+...|+|+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~--~~-------~~~~ga~~~~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVA-RAMGLRVLAAASRPEKL--AL-------PLALGAEEAATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSGGGS--HH-------HHHTTCSEEEEGGGHHHHHHHTTSEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHH--HH-------HHhcCCCEEEECCcchhHHHHhcCceEEE
Confidence 4789999998 99999999985 78999999999876432 11 11122211111111 12333346789999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
. +.. + .-+..++.|+++..++.++-
T Consensus 195 d-~g~-~-----~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 195 E-VRG-K-----EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp E-CSC-T-----THHHHHTTEEEEEEEEEC--
T ss_pred E-CCH-H-----HHHHHHHhhccCCEEEEEeC
Confidence 8 763 2 23567888888888888763
No 348
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.80 E-value=0.029 Score=55.08 Aligned_cols=98 Identities=16% Similarity=0.289 Sum_probs=69.3
Q ss_pred cccCCCEEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH
Q 020301 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (328)
Q Consensus 161 ~~l~g~tvgIiG~G----------~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (328)
..+.|++|+|+|+- .=...+++.| ...|++|.+|||.... + .. .....++
T Consensus 349 ~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L-~~~g~~V~~~DP~~~~--------~---------~~--~~~~~~~ 408 (478)
T 3g79_A 349 KKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLC-LKAGASVMVHDPYVVN--------Y---------PG--VEISDNL 408 (478)
T ss_dssp CCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHH-HHHTCEEEEECSSCCC--------B---------TT--BCEESCH
T ss_pred cCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHH-HHCCCEEEEECCCccc--------c---------cC--cceecCH
Confidence 36899999999974 2357888887 6889999999997641 0 00 1123688
Q ss_pred HHHhhcCCEEEEcCCCChhhhccccHH-HHhcCC-CCcEEEEcCCCcccCHHHH
Q 020301 231 DEVLREADVISLHPVLDKTTYHLINKE-RLATMK-KEAILVNCSRGPVIDEVAL 282 (328)
Q Consensus 231 ~ell~~aDiV~l~~plt~~t~~li~~~-~~~~mk-~ga~lIN~aRG~~vde~aL 282 (328)
++.++.||.|+++.+ -++.+. ++-+ ..+.|+ ++.+++++ |+ +.|.+.+
T Consensus 409 ~~~~~~ad~vvi~t~-~~~f~~-~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~~ 458 (478)
T 3g79_A 409 EEVVRNADAIVVLAG-HSAYSS-LKADWAKKVSAKANPVIIDG-RN-VIEPDEF 458 (478)
T ss_dssp HHHHTTCSEEEECSC-CHHHHS-CCHHHHHHHHCCSSCEEEES-SS-CSCHHHH
T ss_pred HHHHhcCCEEEEecC-CHHHHh-hhHHHHHHHhccCCCEEEEC-CC-CCCHHHH
Confidence 999999999999987 345444 4544 445677 48899996 54 4676555
No 349
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.79 E-value=0.015 Score=58.60 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=65.2
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhcC-CCC
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKAN-GEQ 220 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~-~~~ 220 (328)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|...- .+.+...+. +.+- ...
T Consensus 322 ekL~~arVLIVGaGGLGs~vA~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~----L~~iNP~V 396 (615)
T 4gsl_A 322 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS----LKRIFPLM 396 (615)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHH----HHHHCTTC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHH----HHhhCCCc
Confidence 3689999999999999999999985 6676 7888887531 011111110 1100 000
Q ss_pred Ccccc-------------------ccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 221 PVTWK-------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 221 ~~~~~-------------------~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
..... ...+++++++++|+|+.|+- +.+++.+++...... +..+|+.+
T Consensus 397 ~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD-n~~tR~~ln~~c~~~---~~PlI~aa 463 (615)
T 4gsl_A 397 DATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 463 (615)
T ss_dssp EEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-SGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred EEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC-CHHHHHHHHHHHHHc---CCeEEEEE
Confidence 00000 01235678999999998875 778999998877654 44566654
No 350
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.78 E-value=0.0095 Score=56.14 Aligned_cols=102 Identities=14% Similarity=0.182 Sum_probs=52.5
Q ss_pred CEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhc---CCCCCccccccCCHHHHhh-cCCEE
Q 020301 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA---NGEQPVTWKRASSMDEVLR-EADVI 240 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ell~-~aDiV 240 (328)
.+|||+| .|.||+.+++.|...=+++|.+..++.....+.+.+.|+..... .+...... ...+++++++ .+|+|
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~DvV 87 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVV-IPTDPKHEEFEDVDIV 87 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBC-EESCTTSGGGTTCCEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEE-EeCCHHHHhcCCCCEE
Confidence 4799999 99999999999743335788766422111101111111100000 00000111 1124556656 89999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
++|+|.. .+.. +-... .+.|+.+|+.+-
T Consensus 88 ~~atp~~-~~~~-~a~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 88 FSALPSD-LAKK-FEPEF---AKEGKLIFSNAS 115 (354)
T ss_dssp EECCCHH-HHHH-HHHHH---HHTTCEEEECCS
T ss_pred EECCCch-HHHH-HHHHH---HHCCCEEEECCc
Confidence 9999832 2222 11222 246788888763
No 351
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.77 E-value=0.016 Score=53.82 Aligned_cols=94 Identities=16% Similarity=0.130 Sum_probs=60.4
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----cC
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (328)
.|++|.|+|.|.+|...++.+ +.+|+ +|++.+++.... ++ +++- ....-.....++.+.+. ..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~--~~-------~~~l-a~~v~~~~~~~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVV-RASGAGPILVSDPNPYRL--AF-------ARPY-ADRLVNPLEEDLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHH--GG-------GTTT-CSEEECTTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH--HH-------HHHh-HHhccCcCccCHHHHHHHhcCCCC
Confidence 788999999999999999985 79999 999999875432 11 1111 10000011124444443 58
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|+|+-++... ++ -+..++.|+++..++.++.
T Consensus 233 D~vid~~g~~-~~----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 233 EVLLEFSGNE-AA----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEEECSCCH-HH----HHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCCH-HH----HHHHHHHHhcCCEEEEEec
Confidence 9999888732 21 2456677788878877753
No 352
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.021 Score=53.20 Aligned_cols=95 Identities=13% Similarity=0.123 Sum_probs=61.6
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccc-cccCCHHHHhh-----c
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRASSMDEVLR-----E 236 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ell~-----~ 236 (328)
.|+++.|+|. |.||+.+++.+ +..|++|++.+++.... +....+ |...... ....++.+.+. .
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~V~~~~~~~~~~--~~~~~~-------g~~~~~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYA-KAMGYRVLGIDGGEGKE--ELFRSI-------GGEVFIDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEECSTTHH--HHHHHT-------TCCEEEETTTCSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCcEEEEcCCHHHH--HHHHHc-------CCceEEecCccHhHHHHHHHHhCCC
Confidence 4789999999 89999999985 78999999999876432 111111 2211111 11234555444 4
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+|+.+....+ .-+..++.|+++..+|+++.
T Consensus 239 ~D~vi~~~g~~~-----~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 239 AHGVINVSVSEA-----AIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEEECSSCHH-----HHHHHTTSEEEEEEEEECCC
T ss_pred CCEEEECCCcHH-----HHHHHHHHHhcCCEEEEEeC
Confidence 799998876322 12456677888888888764
No 353
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.74 E-value=0.03 Score=54.84 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=49.0
Q ss_pred CCEEEEEec----CHHHHHHHHHHHhcC--CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--
Q 020301 165 GQTVGVIGA----GRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (328)
Q Consensus 165 g~tvgIiG~----G~IG~~vA~~l~~~f--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (328)
-.++||||+ |.||+..++.+. .. +++|. ++|+++.. .+++.+.| +... ...+.+++++++
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~-~~~~~~~lvav~d~~~~~-a~~~a~~~-------g~~~--~~~~~d~~ell~~~ 107 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQ-QLSSQFQIVALYNPTLKS-SLQTIEQL-------QLKH--ATGFDSLESFAQYK 107 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHH-HTTTTEEEEEEECSCHHH-HHHHHHHT-------TCTT--CEEESCHHHHHHCT
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHH-hcCCCeEEEEEEeCCHHH-HHHHHHHc-------CCCc--ceeeCCHHHHhcCC
Confidence 358999999 999999999874 54 78865 77887643 22222222 2211 123579999996
Q ss_pred cCCEEEEcCC
Q 020301 236 EADVISLHPV 245 (328)
Q Consensus 236 ~aDiV~l~~p 245 (328)
..|+|++++|
T Consensus 108 ~vD~V~I~tp 117 (479)
T 2nvw_A 108 DIDMIVVSVK 117 (479)
T ss_dssp TCSEEEECSC
T ss_pred CCCEEEEcCC
Confidence 6899999999
No 354
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.73 E-value=0.022 Score=52.20 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=57.4
Q ss_pred CEEEEEe-cCHHHHHHHHHHHhcCCcEEEEE-cCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYY-DLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.+|+|+| +|+||+.+++.+.+.=++++.+. |+......-... .+-.|..+.+.....++++++..+|+|+-+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~------gel~G~~~~gv~v~~dl~~ll~~aDVvIDF 95 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDA------SILIGSDFLGVRITDDPESAFSNTEGILDF 95 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBG------GGGTTCSCCSCBCBSCHHHHTTSCSEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccch------HHhhccCcCCceeeCCHHHHhcCCCEEEEc
Confidence 4799999 99999999998755568886644 775422100000 001122223334457999999999999877
Q ss_pred CCCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 244 ~plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
.+ |+... +..-..++.|.-+|-.+.|
T Consensus 96 T~--p~a~~---~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 96 SQ--PQASV---LYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp SC--HHHHH---HHHHHHHHHTCEEEECCCC
T ss_pred CC--HHHHH---HHHHHHHHcCCCEEEECCC
Confidence 64 33211 1111223445556655556
No 355
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.72 E-value=0.018 Score=57.91 Aligned_cols=104 Identities=15% Similarity=0.229 Sum_probs=65.4
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhcCCCCC
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (328)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|...- .+.+...+...+. .....
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~i---NP~v~ 398 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI---FPLMD 398 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-TTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHH---CTTCE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhH---CCCcE
Confidence 5799999999999999999999985 6776 7888876421 1111111111000 00000
Q ss_pred cccc-------------------ccCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 222 VTWK-------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 222 ~~~~-------------------~~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.... ...+++++++++|+|+.|+. +.+++.+++...... +..+|+.+
T Consensus 399 v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 399 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp EEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred EEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 0000 01235678999999999886 678899888877654 33566654
No 356
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.71 E-value=0.01 Score=51.18 Aligned_cols=102 Identities=11% Similarity=0.228 Sum_probs=61.9
Q ss_pred CCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCc--cccccCCHHHHhhcCCEEE
Q 020301 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (328)
Q Consensus 165 g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiV~ 241 (328)
.|++.|.| .|.||+.+++.|++.-|.+|++.+|++....++... ...+.... ......+++++++.+|+|+
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII------DHERVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH------TSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc------CCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 36799999 599999999998426799999999986511111100 00011000 0111235667889999999
Q ss_pred EcCCCChhhhccccHHHHhcCCC-C-cEEEEcCCCcc
Q 020301 242 LHPVLDKTTYHLINKERLATMKK-E-AILVNCSRGPV 276 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~-g-a~lIN~aRG~~ 276 (328)
.+..... .. ....+..|+. + ..|||+|....
T Consensus 79 ~~ag~~n-~~---~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 79 VGAMESG-SD---MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp ESCCCCH-HH---HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred EcCCCCC-hh---HHHHHHHHHhcCCCeEEEEeecee
Confidence 9887431 11 4555555642 2 36888876443
No 357
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.70 E-value=0.016 Score=55.97 Aligned_cols=70 Identities=11% Similarity=0.121 Sum_probs=48.9
Q ss_pred CEEEEEec----CHHHHHHHHHHHhcC--CcEE-EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--c
Q 020301 166 QTVGVIGA----GRIGSAYARMMVEGF--KMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E 236 (328)
Q Consensus 166 ~tvgIiG~----G~IG~~vA~~l~~~f--g~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~ 236 (328)
.++||||+ |.||+..++.+. .. +++| .++|+++.. .++..+.| +... ...+.+++++++ .
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~-~~~~~~~lvav~d~~~~~-~~~~a~~~-------g~~~--~~~~~~~~~ll~~~~ 89 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAIL-QLSSQFQITALYSPKIET-SIATIQRL-------KLSN--ATAFPTLESFASSST 89 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHH-HTTTTEEEEEEECSSHHH-HHHHHHHT-------TCTT--CEEESSHHHHHHCSS
T ss_pred CEEEEEcccCCCChHHHHHHHHHH-hcCCCeEEEEEEeCCHHH-HHHHHHHc-------CCCc--ceeeCCHHHHhcCCC
Confidence 47999999 999999999874 55 7886 477887643 22222222 2211 123579999997 5
Q ss_pred CCEEEEcCCC
Q 020301 237 ADVISLHPVL 246 (328)
Q Consensus 237 aDiV~l~~pl 246 (328)
.|+|++++|.
T Consensus 90 vD~V~i~tp~ 99 (438)
T 3btv_A 90 IDMIVIAIQV 99 (438)
T ss_dssp CSEEEECSCH
T ss_pred CCEEEEeCCc
Confidence 8999999993
No 358
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=95.69 E-value=0.028 Score=52.00 Aligned_cols=106 Identities=17% Similarity=0.253 Sum_probs=71.0
Q ss_pred ccCCCEEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCC
Q 020301 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (328)
Q Consensus 162 ~l~g~tvgIiG~---G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (328)
.+.|.+|+++|= |++.++++..+ ..||++|.+..|..-...++.. +.++..|. ......++++.+++||
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~----~~~~~~g~---~~~~~~d~~eav~~aD 223 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEAL-TFYDVELYLISPELLRMPRHIV----EELREKGM---KVVETTTLEDVIGKLD 223 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHG-GGSCEEEEEECCGGGCCCHHHH----HHHHHTTC---CEEEESCTHHHHTTCS
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHH-HHCCCEEEEECCccccCCHHHH----HHHHHcCC---eEEEEcCHHHHhcCCC
Confidence 478999999998 48999999986 6899999999885321111111 11222231 1223468999999999
Q ss_pred EEEEcCCCC------hhh-----hccccHHHHhcCCCCcEEEEcC-CCc
Q 020301 239 VISLHPVLD------KTT-----YHLINKERLATMKKEAILVNCS-RGP 275 (328)
Q Consensus 239 iV~l~~plt------~~t-----~~li~~~~~~~mk~ga~lIN~a-RG~ 275 (328)
+|..-.=-. ++. ..-+|.+.++.+||+++|.-+. ||.
T Consensus 224 vvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~ 272 (308)
T 1ml4_A 224 VLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVD 272 (308)
T ss_dssp EEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSCCSS
T ss_pred EEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCCCCC
Confidence 997644211 111 2346888999999999888773 443
No 359
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.69 E-value=1.4 Score=41.29 Aligned_cols=107 Identities=12% Similarity=0.152 Sum_probs=67.0
Q ss_pred cccCCCEEEEEecC-HHHHHHHHHHHhcCCcEEEEEcCCch---hHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc
Q 020301 161 NLLKGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQA---TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (328)
Q Consensus 161 ~~l~g~tvgIiG~G-~IG~~vA~~l~~~fg~~V~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (328)
..+.|.+|++||=+ ++..+++..+ ..||++|.+..|..- +...+....+ +. ............+++|.+++
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l-~~lG~~v~~~~P~~~~~~~~i~~~~~~~---a~-~~~~g~~~~~~~d~~eav~~ 258 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAA-TKMGVNVAVATPRGYEIPSHIVELIQKA---RE-GVQSPGNLTQTTVPEVAVKD 258 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHHHHHHH---HT-TCSSCCCEEEESCHHHHTTT
T ss_pred cccCCCEEEEECCCchHHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHh---hh-hccCCCeEEEECCHHHHhcC
Confidence 45899999999976 4677777775 579999999987532 1111111111 00 00001122344699999999
Q ss_pred CCEEEEcC--CCChh----------hhccccHHHHhc--CCCCcEEEEcC
Q 020301 237 ADVISLHP--VLDKT----------TYHLINKERLAT--MKKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~--plt~~----------t~~li~~~~~~~--mk~ga~lIN~a 272 (328)
||+|..-. +...+ ...-++.+.++. +|++++|.-+.
T Consensus 259 aDVvytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 259 ADVIVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CSEEEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred CCEEEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 99997642 22211 113579999998 89999998774
No 360
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.68 E-value=0.025 Score=53.15 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=53.2
Q ss_pred CEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.+|||+| .|.||+.+.+.|...=.+++.+........ .++.+.|+.+ .+.... ...++++ +..+|+|++|+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~~~---~g~~~~---~~~~~~~-~~~vDvV~~a~ 76 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHPNL---RGRTNL---KFVPPEK-LEPADILVLAL 76 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCGGG---TTTCCC---BCBCGGG-CCCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCchh---cCcccc---cccchhH-hcCCCEEEEcC
Confidence 4799999 899999999997533356877665432211 1111111100 010111 1223444 57899999999
Q ss_pred CCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 245 VLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 245 plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|.... +.+. ... ++.|+.+|+.+-
T Consensus 77 g~~~s-~~~a-~~~---~~aG~~VId~Sa 100 (345)
T 2ozp_A 77 PHGVF-AREF-DRY---SALAPVLVDLSA 100 (345)
T ss_dssp CTTHH-HHTH-HHH---HTTCSEEEECSS
T ss_pred CcHHH-HHHH-HHH---HHCCCEEEEcCc
Confidence 95432 2221 222 356888888864
No 361
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.68 E-value=0.025 Score=52.80 Aligned_cols=116 Identities=16% Similarity=0.248 Sum_probs=68.5
Q ss_pred EEEEEecCHHHHHHHHHHHhc--------CCcEEEEE-cCCchhH----HHHHHhhhhhhhhcCCCCCccccccCCHHHH
Q 020301 167 TVGVIGAGRIGSAYARMMVEG--------FKMNLIYY-DLYQATR----LEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~--------fg~~V~~~-d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el 233 (328)
++||||+|.||+.+++.+.+. .+.+|.+. |++.... ..+..... ...+ ......+++++
T Consensus 4 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~----~~~~----~~~~~~d~~~l 75 (327)
T 3do5_A 4 KIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMK----RETG----MLRDDAKAIEV 75 (327)
T ss_dssp EEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHH----HHHS----SCSBCCCHHHH
T ss_pred EEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhh----ccCc----cccCCCCHHHH
Confidence 799999999999999987543 67887654 6553211 01110000 0000 00002389999
Q ss_pred hhc--CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCCc
Q 020301 234 LRE--ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNPM 291 (328)
Q Consensus 234 l~~--aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~v-de~aL~~aL~~g~i 291 (328)
+.. .|+|+.|.|....+.. .-+-....++.|.-+|...-+.+. +-+.|.++.++...
T Consensus 76 l~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~ 135 (327)
T 3do5_A 76 VRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGV 135 (327)
T ss_dssp HHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCC
Confidence 864 8999999995433222 223345667788888877555553 55677777776554
No 362
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.65 E-value=0.019 Score=53.48 Aligned_cols=92 Identities=24% Similarity=0.264 Sum_probs=60.6
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh------c
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (328)
.|++|.|+|. |.||...++.+ +.+|++|++.+++.... +....+ |........ .++.+.+. .
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~--~~~~~~-------ga~~v~~~~-~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIA-KGMGAKVIAVVNRTAAT--EFVKSV-------GADIVLPLE-EGWAKAVREATGGAG 227 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSGGGH--HHHHHH-------TCSEEEESS-TTHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH--HHHHhc-------CCcEEecCc-hhHHHHHHHHhCCCC
Confidence 5889999998 99999999985 79999999999876542 122222 222111111 33333222 4
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.|+|+.++... .-...++.++++..++.++
T Consensus 228 ~Dvvid~~g~~------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 228 VDMVVDPIGGP------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEEEESCC--------CHHHHHHTEEEEEEEEEC-
T ss_pred ceEEEECCchh------HHHHHHHhhcCCCEEEEEE
Confidence 89999887731 2356778888888888876
No 363
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.63 E-value=0.045 Score=51.56 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=25.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d 196 (328)
.+|||+|+|+||+.+.|.|...=+++|.+.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 3899999999999999987433368877765
No 364
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.63 E-value=0.028 Score=54.31 Aligned_cols=74 Identities=16% Similarity=0.222 Sum_probs=47.9
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccC----CHHHHhh--cCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS----SMDEVLR--EAD 238 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~ell~--~aD 238 (328)
.+|||||+|.||+..++.+.+.-+++|. ++|+++... ++..+.+ ...+... ...+. +++++++ ..|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~-~~~a~~~----~~~g~~~--~~~~~~~~~~~~~ll~~~~vD 93 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMV-GRAQEIL----KKNGKKP--AKVFGNGNDDYKNMLKDKNID 93 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHH-HHHHHHH----HHTTCCC--CEEECSSTTTHHHHTTCTTCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHHHHHH----HhcCCCC--CceeccCCCCHHHHhcCCCCC
Confidence 4799999999999999987432378864 778876432 2221111 0112110 11235 8999998 589
Q ss_pred EEEEcCCC
Q 020301 239 VISLHPVL 246 (328)
Q Consensus 239 iV~l~~pl 246 (328)
+|++++|.
T Consensus 94 ~V~i~tp~ 101 (444)
T 2ixa_A 94 AVFVSSPW 101 (444)
T ss_dssp EEEECCCG
T ss_pred EEEEcCCc
Confidence 99999993
No 365
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.62 E-value=0.026 Score=52.83 Aligned_cols=30 Identities=30% Similarity=0.565 Sum_probs=24.5
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEc
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d 196 (328)
+|||+|+|+||+.++|.+...=+++|.+..
T Consensus 5 kVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 5 KIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred EEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 799999999999999987433378877664
No 366
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.62 E-value=0.018 Score=54.18 Aligned_cols=31 Identities=26% Similarity=0.216 Sum_probs=24.4
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEEEc
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d 196 (328)
.+|||+|+|+||+.+++.+...=+++|.+..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~ 33 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVT 33 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 3799999999999999987433368877653
No 367
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.60 E-value=0.021 Score=53.57 Aligned_cols=94 Identities=14% Similarity=0.014 Sum_probs=61.1
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHH----hh--cC
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV----LR--EA 237 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el----l~--~a 237 (328)
.|++|.|+|.|.||...++.+ +.+|++|++.+++.... ++...+ |....-.....++.+. .. ..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~--~~~~~l-------Ga~~vi~~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIA-KATGAEVIVTSSSREKL--DRAFAL-------GADHGINRLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHH-HHTTCEEEEEESCHHHH--HHHHHH-------TCSEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEecCchhH--HHHHHc-------CCCEEEcCCcccHHHHHHHHhCCCCc
Confidence 588999999999999999985 89999999999876432 112222 2211111111233332 22 58
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|+|+-++. . + .-...++.++++..++.++-
T Consensus 259 D~vid~~g-~-~----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 259 DHILEIAG-G-A----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEEEEETT-S-S----CHHHHHHHEEEEEEEEEECC
T ss_pred eEEEECCC-h-H----HHHHHHHHhhcCCEEEEEec
Confidence 99998876 2 2 23556778888888887753
No 368
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.60 E-value=0.031 Score=52.20 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=26.1
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY 198 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~ 198 (328)
+|||+|+|+||+.+.|.+...-.++|.+.+-.
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 79999999999999998754457888776543
No 369
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.59 E-value=0.022 Score=52.71 Aligned_cols=107 Identities=22% Similarity=0.228 Sum_probs=61.0
Q ss_pred CEEEEEecCHHHHHHHHHHHh-cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.+|+|||.|.+|..++..++. +..-++..+|..... .+.....+..... -. ...... ..+ .+.++.||+|+++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k-~~g~a~dl~~~~~-~~-~~~~v~-~~~-~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKL-AQAHAEDILHATP-FA-HPVWVW-AGS-YGDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHH-HHHHHHHHHTTGG-GS-CCCEEE-ECC-GGGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhH-HHHHHHHHHHhHh-hc-CCeEEE-ECC-HHHhCCCCEEEECC
Confidence 479999999999999988753 233589999997532 2222111111100 00 111111 133 56789999999998
Q ss_pred CCChhhhcc-------ccH-------HHHhcCCCCcEEEEcCCCcccCHH
Q 020301 245 VLDKTTYHL-------INK-------ERLATMKKEAILVNCSRGPVIDEV 280 (328)
Q Consensus 245 plt~~t~~l-------i~~-------~~~~~mk~ga~lIN~aRG~~vde~ 280 (328)
+... ..++ .|. +.+....|+++++|++ ..+|.-
T Consensus 76 g~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~~ 122 (310)
T 2xxj_A 76 GVAQ-RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT--NPVDVM 122 (310)
T ss_dssp CCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHHH
T ss_pred CCCC-CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec--CchHHH
Confidence 6432 2221 111 1222336899999984 444443
No 370
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.58 E-value=0.032 Score=52.56 Aligned_cols=94 Identities=18% Similarity=0.138 Sum_probs=61.2
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc--cCCHHHHhh-----
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (328)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++.... ++. ++-|....-... ..++.+.+.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a-~~~Ga~~Vi~~~~~~~~~--~~a-------~~lGa~~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGA-KTAGASRIIGIDIDSKKY--ETA-------KKFGVNEFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHHTCSCEEEECSCTTHH--HHH-------HTTTCCEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHH--HHH-------HHcCCcEEEccccCchhHHHHHHHhcCC
Confidence 588999999999999999984 78999 899999876542 122 222322111111 234444433
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCC-cEEEEcC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCS 272 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~g-a~lIN~a 272 (328)
..|+|+-++.. +++ -...++.+++| ..++.++
T Consensus 263 g~D~vid~~g~-~~~----~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 263 GVDYSFECIGN-VSV----MRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEECCCC-HHH----HHHHHHHhhccCCEEEEEc
Confidence 38999988873 222 24567788885 7777765
No 371
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.55 E-value=0.03 Score=51.66 Aligned_cols=94 Identities=18% Similarity=0.117 Sum_probs=62.0
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcccccc-CCHHHHhh-----c
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SSMDEVLR-----E 236 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ell~-----~ 236 (328)
.|+++.|.|. |.||+.+++.+ +..|++|++.+++.... +. ...+ +......... .++.+.+. .
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~-~~-~~~~-------g~~~~~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIA-KLKGCKVVGAAGSDEKI-AY-LKQI-------GFDAAFNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHH-HHTTCEEEEEESSHHHH-HH-HHHT-------TCSEEEETTSCSCHHHHHHHHCTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH-HHhc-------CCcEEEecCCHHHHHHHHHHHhCCC
Confidence 5889999998 99999999986 78999999999875432 11 1211 2111111111 34444443 4
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+++.+... .+ -...++.++++..++.++-
T Consensus 215 ~d~vi~~~g~--~~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 215 YDCYFDNVGG--EF----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEEEESSCH--HH----HHHHHTTEEEEEEEEECCC
T ss_pred CeEEEECCCh--HH----HHHHHHHHhcCCEEEEEec
Confidence 7999988762 21 3567788899999988863
No 372
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.53 E-value=0.054 Score=51.90 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=48.4
Q ss_pred CCEEEEEecCH---HHHHHHHHHHhcCCcEEE--EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc---
Q 020301 165 GQTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--- 236 (328)
Q Consensus 165 g~tvgIiG~G~---IG~~vA~~l~~~fg~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--- 236 (328)
-.++||||+|. ||+..+..+...-++++. ++|+++... ++..+.| +... ...+.+++++++.
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~~-------g~~~--~~~~~~~~~ll~~~~~ 106 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKA-EASGREL-------GLDP--SRVYSDFKEMAIREAK 106 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHH-HHHHHHH-------TCCG--GGBCSCHHHHHHHHHH
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHH-HHHHHHc-------CCCc--ccccCCHHHHHhcccc
Confidence 34899999999 999988875333347876 568876532 3333333 2211 1235799999987
Q ss_pred ----CCEEEEcCCCC
Q 020301 237 ----ADVISLHPVLD 247 (328)
Q Consensus 237 ----aDiV~l~~plt 247 (328)
.|+|+++.|..
T Consensus 107 ~~~~vD~V~I~tp~~ 121 (417)
T 3v5n_A 107 LKNGIEAVAIVTPNH 121 (417)
T ss_dssp CTTCCSEEEECSCTT
T ss_pred cCCCCcEEEECCCcH
Confidence 89999999954
No 373
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.51 E-value=0.024 Score=52.31 Aligned_cols=67 Identities=10% Similarity=0.052 Sum_probs=46.6
Q ss_pred CEEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh---------
Q 020301 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (328)
Q Consensus 166 ~tvgIiG~-G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--------- 234 (328)
.++||||+ |.||+..++.+ +..+.++. ++|+++... ...+.| + ....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~~~~~-------~----~~~~~~~~~~ll~~~~~l~~~ 69 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAI-KEVGGVLVASLDPATNVG--LVDSFF-------P----EAEFFTEPEAFEAYLEDLRDR 69 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GGGGTC-------T----TCEEESCHHHHHHHHHHHHHT
T ss_pred eEEEEECCChHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HHHhhC-------C----CCceeCCHHHHHHHhhhhccc
Confidence 57999999 78999999987 46688755 678876431 110000 0 123457889988
Q ss_pred -hcCCEEEEcCCC
Q 020301 235 -READVISLHPVL 246 (328)
Q Consensus 235 -~~aDiV~l~~pl 246 (328)
.+.|+|+++.|.
T Consensus 70 ~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 70 GEGVDYLSIASPN 82 (312)
T ss_dssp TCCCSEEEECSCG
T ss_pred CCCCcEEEECCCc
Confidence 578999999993
No 374
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.50 E-value=0.015 Score=53.68 Aligned_cols=95 Identities=19% Similarity=0.159 Sum_probs=61.8
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----cC
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (328)
.|+++.|+|. |.||..+++.+ +.+|++|++.+++.... + .. .+.-|..........++.+.+. ..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~-~-~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIA-RLKGCRVVGIAGGAEKC-R-FL------VEELGFDGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH-H-HH------HHTTCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-H-HH------HHHcCCCEEEECCCHHHHHHHHHhcCCCc
Confidence 5889999999 99999999985 78999999999876432 1 11 0112221111111123433332 48
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|+|+.+... + .-...++.++++..+|.++.
T Consensus 220 d~vi~~~g~--~----~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 220 DVFFDNVGG--E----ILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEEESSCH--H----HHHHHHTTEEEEEEEEECCC
T ss_pred eEEEECCCc--c----hHHHHHHHHhhCCEEEEEee
Confidence 999888762 2 23567788888888888764
No 375
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.49 E-value=0.017 Score=54.30 Aligned_cols=95 Identities=9% Similarity=0.059 Sum_probs=60.8
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----cC
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (328)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++.... ++...+ |....-.....++.+.+. ..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qla-k~~Ga~~Vi~~~~~~~~~--~~a~~l-------Ga~~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAA-KVCGASIIIAVDIVESRL--ELAKQL-------GATHVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHH-HHHTCSEEEEEESCHHHH--HHHHHH-------TCSEEEETTTSCHHHHHHHHTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEECCCHHHH--HHHHHc-------CCCEEecCCccCHHHHHHHhcCCCC
Confidence 478999999999999999984 78999 799999876432 122222 221111111123333332 47
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|+|+-++.. +++ -...++.++++..++.++-
T Consensus 260 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 260 NFALESTGS-PEI----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEEECSCC-HHH----HHHHHHTEEEEEEEEECCC
T ss_pred cEEEECCCC-HHH----HHHHHHHHhcCCEEEEeCC
Confidence 999988763 221 2456778888888888764
No 376
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.48 E-value=0.017 Score=53.91 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=62.3
Q ss_pred CCCEEEEE-ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----cC
Q 020301 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (328)
Q Consensus 164 ~g~tvgIi-G~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (328)
.|++|.|+ |.|.||..+++.+ +..|++|++.+++.... +....+ |..........++.+.+. ..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~--~~~~~l-------Ga~~~~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLA-RAFGAEVYATAGSTGKC--EACERL-------GAKRGINYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH--HHHHHH-------TCSEEEETTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH--HHHHhc-------CCCEEEeCCchHHHHHHHHHhCCCc
Confidence 58899999 6899999999985 79999999999876542 111122 221111111224444333 48
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|+++.++.. + .-...++.++++..++.++.
T Consensus 237 Dvvid~~g~-~-----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 237 DIILDMIGA-A-----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEEESCCG-G-----GHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCCH-H-----HHHHHHHHhccCCEEEEEEe
Confidence 999988873 1 23567788888888888863
No 377
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.48 E-value=0.025 Score=54.94 Aligned_cols=120 Identities=18% Similarity=0.098 Sum_probs=71.8
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc-CCEE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE-ADVI 240 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~-aDiV 240 (328)
++.|+++.|||+|.+|.++|+.| +..|.+|.++|.......+ . .+.++..|.. +..-...++++.. +|+|
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l-~~~G~~V~~~D~~~~~~~~-~----~~~L~~~gi~---~~~g~~~~~~~~~~~d~v 76 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLL-AKLGAIVTVNDGKPFDENP-T----AQSLLEEGIK---VVCGSHPLELLDEDFCYM 76 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHH-HHTTCEEEEEESSCGGGCH-H----HHHHHHTTCE---EEESCCCGGGGGSCEEEE
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEeCCcccCCh-H----HHHHHhCCCE---EEECCChHHhhcCCCCEE
Confidence 57899999999999999999987 6899999999986521100 0 0112233321 1111223456676 8999
Q ss_pred EEc--CCC-Chhh-----h--ccccHH-HHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 020301 241 SLH--PVL-DKTT-----Y--HLINKE-RLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (328)
Q Consensus 241 ~l~--~pl-t~~t-----~--~li~~~-~~~~-mk~ga~lIN~aRG~~vde~aL~~aL~~g~ 290 (328)
++. +|. +|+- + .++.+- .+.. ++...+-|--+.|..--..-|...|+...
T Consensus 77 v~spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 77 IKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp EECTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred EECCcCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 876 332 1221 1 144443 3333 34334444446788777777777787643
No 378
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.46 E-value=0.042 Score=50.82 Aligned_cols=111 Identities=18% Similarity=0.287 Sum_probs=73.1
Q ss_pred ccCCCEEEEEec---CHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcC
Q 020301 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (328)
Q Consensus 162 ~l~g~tvgIiG~---G~IG~~vA~~l~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (328)
.+.|.+|+++|= |++.++++..+ ..| |++|.+..|..-...+...+ .++..|. ......+++|.+++|
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~~~----~~~~~g~---~~~~~~d~~eav~~a 222 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQAL-AKFDGNRFYFIAPDALAMPQYILD----MLDEKGI---AWSLHSSIEEVMAEV 222 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHH----HHHHTTC---CEEECSCGGGTTTTC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCcccccCHHHHH----HHHHcCC---eEEEEcCHHHHhcCC
Confidence 478999999998 59999999997 589 99999998853211111111 1222231 122346899999999
Q ss_pred CEEEEcCCCCh----hh------hccccHHHHhcCCCCcEEEEcC-CCcccCHH
Q 020301 238 DVISLHPVLDK----TT------YHLINKERLATMKKEAILVNCS-RGPVIDEV 280 (328)
Q Consensus 238 DiV~l~~plt~----~t------~~li~~~~~~~mk~ga~lIN~a-RG~~vde~ 280 (328)
|+|..-.=-.+ +. ..-++++.++.+||++++.-+. ||.=|+.+
T Consensus 223 Dvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~EI~~e 276 (310)
T 3csu_A 223 DILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATD 276 (310)
T ss_dssp SEEEECC-----------------CCBCGGGGTTCCTTCEEECCSCCSSSBCHH
T ss_pred CEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCCCCCeecHH
Confidence 99976533211 11 2346899999999999998874 65545443
No 379
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.45 E-value=0.0087 Score=52.35 Aligned_cols=102 Identities=11% Similarity=0.115 Sum_probs=62.5
Q ss_pred cCCCEEEEEe-cCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCc--cccccCCHHHHhhcCC
Q 020301 163 LKGQTVGVIG-AGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREAD 238 (328)
Q Consensus 163 l~g~tvgIiG-~G~IG~~vA~~l~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aD 238 (328)
...+++.|.| .|.||+.+++.| ..-| .+|++++|+.....+ ....+.... ......+++++++.+|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L-~~~G~~~V~~~~R~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~D 90 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQL-ADKQTIKQTLFARQPAKIHK---------PYPTNSQIIMGDVLNHAALKQAMQGQD 90 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHH-TTCTTEEEEEEESSGGGSCS---------SCCTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHH-HhCCCceEEEEEcChhhhcc---------cccCCcEEEEecCCCHHHHHHHhcCCC
Confidence 4568999999 699999999998 5778 899999998653110 000010000 0111234667899999
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCC--CcEEEEcCCCcc
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKK--EAILVNCSRGPV 276 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~--ga~lIN~aRG~~ 276 (328)
+|+.+....... ...+..+..|+. ...||++|....
T Consensus 91 ~vv~~a~~~~~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 91 IVYANLTGEDLD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCSTTHH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred EEEEcCCCCchh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 999887643221 122345555532 247888887544
No 380
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.42 E-value=0.13 Score=50.23 Aligned_cols=110 Identities=12% Similarity=0.087 Sum_probs=69.8
Q ss_pred cccCCCEEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhh---hhcCCCCCcccccc
Q 020301 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF---LKANGEQPVTWKRA 227 (328)
Q Consensus 161 ~~l~g~tvgIiG~G----------~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 227 (328)
..+.|++|+|+|+- +=...+++.| ...|++|.+|||.......+ .|+.. ..... . .....
T Consensus 324 ~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~~~~~~~~~~~~-~--~~~~~ 396 (478)
T 2y0c_A 324 EDLTGRTFAIWGLAFKPNTDDMREAPSRELIAEL-LSRGARIAAYDPVAQEEARR---VIALDLADHPSWL-E--RLSFV 396 (478)
T ss_dssp SCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECTTTHHHHHH---HHHHHTTTCHHHH-T--TEEEC
T ss_pred ccCCCCEEEEEecccCCCCCccccChHHHHHHHH-HHCCCEEEEECCCccHHHHH---hhccccccccccc-c--ceeec
Confidence 36889999999984 3456788987 68999999999986432111 12100 00000 0 01224
Q ss_pred CCHHHHhhcCCEEEEcCCCChhhhccccHHHH-hcCCCCcEEEEcCCCcccCHHHH
Q 020301 228 SSMDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEVAL 282 (328)
Q Consensus 228 ~~l~ell~~aDiV~l~~plt~~t~~li~~~~~-~~mk~ga~lIN~aRG~~vde~aL 282 (328)
.++++.++.||+|+++..- ++.+. ++-+.+ +.|+ +.+++++ |+ +.|.+.+
T Consensus 397 ~~~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 447 (478)
T 2y0c_A 397 DDEAQAARDADALVIVTEW-KIFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPETM 447 (478)
T ss_dssp SSHHHHTTTCSEEEECSCC-GGGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHHHH
T ss_pred CCHHHHHhCCCEEEEecCC-hHhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHHHH
Confidence 5788999999999999873 44444 454444 4565 5789988 44 5666543
No 381
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.41 E-value=0.018 Score=53.63 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=57.5
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh------c
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (328)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++.... ++...+ |....-.....++.+.+. .
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~--~~~~~l-------Ga~~vi~~~~~~~~~~v~~~t~g~g 235 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGA-NHLGAGRIFAVGSRKHCC--DIALEY-------GATDIINYKNGDIVEQILKATDGKG 235 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HTTTCSSEEEECCCHHHH--HHHHHH-------TCCEEECGGGSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEECCCHHHH--HHHHHh-------CCceEEcCCCcCHHHHHHHHcCCCC
Confidence 478999999999999999984 89999 899999876432 222222 222111111123333222 4
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.|+|+-+....+. -...++.++++..++.++
T Consensus 236 ~D~v~d~~g~~~~-----~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 236 VDKVVIAGGDVHT-----FAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEEECSSCTTH-----HHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCChHH-----HHHHHHHHhcCCEEEEec
Confidence 7999888764221 244556666666666554
No 382
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.40 E-value=0.032 Score=52.26 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=23.6
Q ss_pred EEEEEecCHHHHHHHHHHHhc--CCcEEEEEc
Q 020301 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYD 196 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~--fg~~V~~~d 196 (328)
+|||+|+|+||+.+.|.|... =.++|.+.+
T Consensus 3 kVgInG~G~IGr~llR~l~~~~~p~~eivaIn 34 (337)
T 1rm4_O 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVIN 34 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 699999999999999987432 257776554
No 383
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.40 E-value=0.054 Score=50.57 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=63.9
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCE
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (328)
....++|+|||.|.||..+|..++ .-|. ++..+|..... .+...........- . .........+.+ .++.||+
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~L~Di~~~~-~~g~a~DL~~~~~~-~-~~~~i~~~~d~~-~~~~aDi 90 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISIL-MKDLADELALVDVIEDK-LKGEMMDLQHGSLF-L-KTPKIVSSKDYS-VTANSKL 90 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSCHHH-HHHHHHHHHHTGGG-C-SCCEEEECSSGG-GGTTEEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEeCChHH-HHHHHHhhhhhhhc-c-CCCeEEEcCCHH-HhCCCCE
Confidence 456789999999999999998865 3355 89999997542 22211111100000 0 011111223555 4899999
Q ss_pred EEEcCCCC--h-hhh-cccc---------HHHHhcCCCCcEEEEcCCCcccCHH
Q 020301 240 ISLHPVLD--K-TTY-HLIN---------KERLATMKKEAILVNCSRGPVIDEV 280 (328)
Q Consensus 240 V~l~~plt--~-~t~-~li~---------~~~~~~mk~ga~lIN~aRG~~vde~ 280 (328)
|+++.... | +|| .++. .+.+....|++++++++- .+|.-
T Consensus 91 Vvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN--Pvdi~ 142 (331)
T 4aj2_A 91 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN--PVDIL 142 (331)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS--SHHHH
T ss_pred EEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC--hHHHH
Confidence 99886422 1 233 2221 123344578999999974 55543
No 384
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.37 E-value=0.02 Score=52.90 Aligned_cols=106 Identities=17% Similarity=0.270 Sum_probs=59.3
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~p 245 (328)
+|+|||.|.+|..+|..++. -|. +|..+|...... +.....+.......+ .........+. +.++.||+|+++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-~~l~el~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-RGYDDLLLIARTPGKP-QGEALDLAHAAAELG-VDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HTCSCEEEECSSTTHH-HHHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHh-CCCCEEEEEcCChhhH-HHHHHHHHHhhhhcC-CCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 58999999999999988653 254 699999986432 221111111000001 01111111455 57899999999976
Q ss_pred CChhhhcc-----------ccHH---HHhcCCCCcEEEEcCCCcccCH
Q 020301 246 LDKTTYHL-----------INKE---RLATMKKEAILVNCSRGPVIDE 279 (328)
Q Consensus 246 lt~~t~~l-----------i~~~---~~~~mk~ga~lIN~aRG~~vde 279 (328)
... ..++ +-.+ .+....|++++|+++- .+|.
T Consensus 77 ~~~-k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN--Pv~~ 121 (308)
T 2d4a_B 77 IGR-KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN--PVDA 121 (308)
T ss_dssp CCC-CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHH
T ss_pred CCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC--chHH
Confidence 432 1221 0112 2233358999999854 4443
No 385
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.35 E-value=0.61 Score=42.57 Aligned_cols=69 Identities=17% Similarity=0.106 Sum_probs=50.6
Q ss_pred ccCCCEEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCC
Q 020301 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (328)
Q Consensus 162 ~l~g~tvgIiG~---G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (328)
.+.|.+|+++|= +++.++.+..+ ..||++|.+..|..-.. .. . .. .+.....+++|.+++||
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~-~~~g~~v~~~~P~~~~p-~~-~-------~~-----~g~~~~~d~~eav~~aD 207 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLL-NMFGAKIGVCGPKTLIP-RD-V-------EV-----FKVDVFDDVDKGIDWAD 207 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGSC-TT-G-------GG-----GCEEEESSHHHHHHHCS
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HHCCCEEEEECCchhCC-ch-H-------HH-----CCCEEEcCHHHHhCCCC
Confidence 478999999996 89999999997 68999999998743210 00 0 01 11233579999999999
Q ss_pred EEEEcCCC
Q 020301 239 VISLHPVL 246 (328)
Q Consensus 239 iV~l~~pl 246 (328)
+|.. +-.
T Consensus 208 vvy~-~~~ 214 (291)
T 3d6n_B 208 VVIW-LRL 214 (291)
T ss_dssp EEEE-CCC
T ss_pred EEEE-eCc
Confidence 9988 443
No 386
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=95.32 E-value=0.085 Score=48.78 Aligned_cols=109 Identities=20% Similarity=0.224 Sum_probs=65.4
Q ss_pred CEEEEEe-cCHHHHHHHHHHHh--cCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcccccc--CCHHHHhhcCCEE
Q 020301 166 QTVGVIG-AGRIGSAYARMMVE--GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLREADVI 240 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~--~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ell~~aDiV 240 (328)
.+|+|+| .|.+|+.+|..|+. .+.-++..+|.... .+.....+ .+ .........+ .+..+.++.||+|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~--~~G~a~Dl----~~-~~~~~~v~~~~~~~~~~~~~~aDiv 73 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV--TPGVAVDL----SH-IPTAVKIKGFSGEDATPALEGADVV 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT--HHHHHHHH----HT-SCSSEEEEEECSSCCHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC--chhHHHHh----hC-CCCCceEEEecCCCcHHHhCCCCEE
Confidence 3799999 99999999998754 36679999998762 11211111 11 1111111111 2567789999999
Q ss_pred EEcCCCC--h-hhh-ccc--cH-------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 020301 241 SLHPVLD--K-TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVALV 283 (328)
Q Consensus 241 ~l~~plt--~-~t~-~li--~~-------~~~~~mk~ga~lIN~aRG~~vde~aL~ 283 (328)
+++.+.. | +|| .++ |. +.+....|++++++++ ..+|.-..+
T Consensus 74 ii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 74 LISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp EECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 9987532 1 122 122 11 1223345899999995 667766555
No 387
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.30 E-value=0.11 Score=43.55 Aligned_cols=73 Identities=12% Similarity=0.076 Sum_probs=48.1
Q ss_pred CCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcc--ccccCCHHHHhhcCCEEE
Q 020301 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT--WKRASSMDEVLREADVIS 241 (328)
Q Consensus 165 g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ell~~aDiV~ 241 (328)
++++.|.|. |.||+.+++.|+ .-|.+|++.+|+...... ....+..... .....++.++++.+|+|+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 72 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAV-QAGYEVTVLVRDSSRLPS---------EGPRPAHVVVGDVLQAADVDKTVAGQDAVI 72 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCGGGSCS---------SSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEEeChhhccc---------ccCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 478999998 999999999984 669999999997643110 0000110000 111234667888999999
Q ss_pred EcCCCC
Q 020301 242 LHPVLD 247 (328)
Q Consensus 242 l~~plt 247 (328)
.+....
T Consensus 73 ~~a~~~ 78 (206)
T 1hdo_A 73 VLLGTR 78 (206)
T ss_dssp ECCCCT
T ss_pred ECccCC
Confidence 887654
No 388
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.29 E-value=0.022 Score=53.40 Aligned_cols=35 Identities=29% Similarity=0.370 Sum_probs=29.2
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCCchh
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQAT 201 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~~-~d~~~~~ 201 (328)
-++||.|||+||+.++|++ ..+|++|++ +||..+.
T Consensus 8 ~kvgInGFGRIGrlv~R~~-~~~~veivainDp~~d~ 43 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRAC-MEKGVKVVAVNDPFIDP 43 (346)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEECTTCCH
T ss_pred eEEEEECCChHHHHHHHHH-HhCCCEEEEEeCCCCCh
Confidence 4799999999999999985 678999887 6775443
No 389
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.28 E-value=0.041 Score=51.54 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=24.9
Q ss_pred EEEEEecCHHHHHHHHHHHh---cCCcEEEEEcC
Q 020301 167 TVGVIGAGRIGSAYARMMVE---GFKMNLIYYDL 197 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~---~fg~~V~~~d~ 197 (328)
+|||+|+|+||+.+.|.|.. .=+++|.+.+.
T Consensus 4 kVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~ 37 (339)
T 2x5j_O 4 RVAINGFGRIGRNVVRALYESGRRAEITVVAINE 37 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeC
Confidence 79999999999999998743 23688876654
No 390
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.28 E-value=0.016 Score=53.37 Aligned_cols=92 Identities=13% Similarity=0.134 Sum_probs=62.2
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC-HHHHhhcCCEEE
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS-MDEVLREADVIS 241 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ell~~aDiV~ 241 (328)
.|.+|.|+| .|.+|...++.+ +.+|++|++.++..+ .++...+ |....-.....+ +.+.+...|+|+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a-~~~Ga~vi~~~~~~~---~~~~~~l-------Ga~~~i~~~~~~~~~~~~~g~D~v~ 220 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLA-KQKGTTVITTASKRN---HAFLKAL-------GAEQCINYHEEDFLLAISTPVDAVI 220 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEECHHH---HHHHHHH-------TCSEEEETTTSCHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HHcCCEEEEEeccch---HHHHHHc-------CCCEEEeCCCcchhhhhccCCCEEE
Confidence 578999997 999999999985 899999998874322 2222222 322111112234 666677899999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
-++.. +. + ...++.++++..++.++
T Consensus 221 d~~g~-~~----~-~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 221 DLVGG-DV----G-IQSIDCLKETGCIVSVP 245 (321)
T ss_dssp ESSCH-HH----H-HHHGGGEEEEEEEEECC
T ss_pred ECCCc-HH----H-HHHHHhccCCCEEEEeC
Confidence 88762 11 2 56778888888888874
No 391
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.26 E-value=0.068 Score=48.80 Aligned_cols=109 Identities=14% Similarity=0.108 Sum_probs=72.9
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
+.|+++.++|........++.| ...|.+|..+.-.... | ...+.....++.+.++++|+|++
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L-~~~g~~v~~~~~~~~~--------~---------~~~g~~~~~~~~~~~~~~d~ii~ 66 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKL-TEQQADIYLVGFDQLD--------H---------GFTGAVKCNIDEIPFQQIDSIIL 66 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHH-HHTTCEEEEESCTTSS--------C---------CCTTEEECCGGGSCGGGCSEEEC
T ss_pred ccCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeccccc--------c---------ccccceeccchHHHHhcCCEEEe
Confidence 6788999999999999999987 5789999876321110 0 01112223456778899999987
Q ss_pred cCCCCh----------hhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCccEE
Q 020301 243 HPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (328)
Q Consensus 243 ~~plt~----------~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ga 294 (328)
..|... .+...++++.++.++++.+++ ++ +|..++.+++.+..+.-.
T Consensus 67 ~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~----~g-~~~~d~~~~~~~~gi~v~ 123 (300)
T 2rir_A 67 PVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF----SG-ISNAYLENIAAQAKRKLV 123 (300)
T ss_dssp CSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE----ES-SCCHHHHHHHHHTTCCEE
T ss_pred ccccccCCcccccccccCCccchHHHHhhcCCCCEEE----Ee-cCCHHHHHHHHHCCCEEE
Confidence 555322 234447899999999998887 23 366775566665555543
No 392
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.26 E-value=0.024 Score=51.70 Aligned_cols=62 Identities=29% Similarity=0.359 Sum_probs=43.2
Q ss_pred CEEEEEecCHHHHHHHHHHHh---cCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCE
Q 020301 166 QTVGVIGAGRIGSAYARMMVE---GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~---~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (328)
.++||||+|.||+..++.+.+ .-++++. ++|++... +..+ . .+.+++++++ ..|+
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a-------------~~~g-----~-~~~~~~ell~~~~vD~ 68 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG-------------SLDE-----V-RQISLEDALRSQEIDV 68 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC-------------EETT-----E-EBCCHHHHHHCSSEEE
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH-------------HHcC-----C-CCCCHHHHhcCCCCCE
Confidence 479999999999999988632 2367766 56664311 0011 1 1368999997 6799
Q ss_pred EEEcCCC
Q 020301 240 ISLHPVL 246 (328)
Q Consensus 240 V~l~~pl 246 (328)
|+++.|.
T Consensus 69 V~i~tp~ 75 (294)
T 1lc0_A 69 AYICSES 75 (294)
T ss_dssp EEECSCG
T ss_pred EEEeCCc
Confidence 9999993
No 393
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.24 E-value=0.03 Score=51.69 Aligned_cols=67 Identities=18% Similarity=0.202 Sum_probs=46.3
Q ss_pred CEEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh---------
Q 020301 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (328)
Q Consensus 166 ~tvgIiG~-G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--------- 234 (328)
.++||||+ |.||+..++.+ +..+.++. ++|+++... ...+.| + ....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~~~~~-------~----~~~~~~~~~~ll~~~~~l~~~ 69 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAI-KDTGNCLVSAYDINDSVG--IIDSIS-------P----QSEFFTEFEFFLDHASNLKRD 69 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GGGGTC-------T----TCEEESSHHHHHHHHHHHTTS
T ss_pred eEEEEECCCcHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HHHhhC-------C----CCcEECCHHHHHHhhhhhhhc
Confidence 57999999 79999999987 45688755 668775431 110000 0 123457888887
Q ss_pred --hcCCEEEEcCCC
Q 020301 235 --READVISLHPVL 246 (328)
Q Consensus 235 --~~aDiV~l~~pl 246 (328)
...|+|+++.|.
T Consensus 70 ~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 70 SATALDYVSICSPN 83 (318)
T ss_dssp TTTSCCEEEECSCG
T ss_pred cCCCCcEEEECCCc
Confidence 568999999994
No 394
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.23 E-value=0.018 Score=50.38 Aligned_cols=70 Identities=21% Similarity=0.316 Sum_probs=45.5
Q ss_pred CEEEEEecCHHHHHHHHHHH-hcCCcEEE-EEcCCch-hHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEE
Q 020301 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~-~~fg~~V~-~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (328)
++++|+|.|++|+.+++.+. ...|+++. ++|.++. .. +. ..-.| .......++++++++ .|++
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~ki--------G~-~~i~G---vpV~~~~dL~~~v~~~~Id~v 152 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLV--------GK-TTEDG---IPVYGISTINDHLIDSDIETA 152 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTT--------TC-BCTTC---CBEEEGGGHHHHC-CCSCCEE
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhcc--------Cc-eeECC---eEEeCHHHHHHHHHHcCCCEE
Confidence 47999999999999998621 35688876 4576654 21 00 00012 222234688888875 8999
Q ss_pred EEcCCCC
Q 020301 241 SLHPVLD 247 (328)
Q Consensus 241 ~l~~plt 247 (328)
++++|..
T Consensus 153 IIAvPs~ 159 (212)
T 3keo_A 153 ILTVPST 159 (212)
T ss_dssp EECSCGG
T ss_pred EEecCch
Confidence 9999953
No 395
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.20 E-value=0.029 Score=52.46 Aligned_cols=93 Identities=16% Similarity=0.209 Sum_probs=60.5
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC---HHHHhhcCCEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (328)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++.... +.... +-|.... ....+ +.++....|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qla-k~~Ga~Vi~~~~~~~~~-~~~~~-------~lGa~~v--i~~~~~~~~~~~~~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIA-KAMGHHVTVISSSNKKR-EEALQ-------DLGADDY--VIGSDQAKMSELADSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSTTHH-HHHHT-------TSCCSCE--EETTCHHHHHHSTTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeCChHHH-HHHHH-------HcCCcee--eccccHHHHHHhcCCCCEE
Confidence 588999999999999999985 78999999999876432 11100 2222211 11122 22333468999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
+-++.... .-...++.++++..++.++
T Consensus 249 id~~g~~~-----~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPVHH-----ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCSCC-----CSHHHHTTEEEEEEEEECS
T ss_pred EECCCChH-----HHHHHHHHhccCCEEEEeC
Confidence 98887321 1245667788888888775
No 396
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.17 E-value=0.044 Score=50.72 Aligned_cols=69 Identities=13% Similarity=0.190 Sum_probs=44.5
Q ss_pred CEEEEEecCHHHHHHHHHHHh-cCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----cCC
Q 020301 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EAD 238 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~-~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~aD 238 (328)
.++||||+|.||+.+++.+.+ .-++++. ++|+++.....+..+.| +.. ....+.+++++ ..|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~-------g~~----~~~~~~e~ll~~~~~~~iD 73 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-------GVT----TTYAGVEGLIKLPEFADID 73 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-------TCC----EESSHHHHHHHSGGGGGEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHc-------CCC----cccCCHHHHHhccCCCCCc
Confidence 479999999999999998744 3467654 56877543112221222 211 01246777764 479
Q ss_pred EEEEcCC
Q 020301 239 VISLHPV 245 (328)
Q Consensus 239 iV~l~~p 245 (328)
+|+.+.|
T Consensus 74 vV~~atp 80 (312)
T 1nvm_B 74 FVFDATS 80 (312)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999999
No 397
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.16 E-value=0.044 Score=50.76 Aligned_cols=114 Identities=15% Similarity=0.056 Sum_probs=69.3
Q ss_pred CCEEEEEecCHHHHH-HHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh-hcCCEEEE
Q 020301 165 GQTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISL 242 (328)
Q Consensus 165 g~tvgIiG~G~IG~~-vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l 242 (328)
.+++.|||.|.+|.+ +|+.| +..|.+|.++|....+...+. +++.|.. ...-.+.+++. .++|+|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L-~~~G~~V~~~D~~~~~~~~~~-------L~~~gi~---v~~g~~~~~l~~~~~d~vV~ 72 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIA-KEAGFEVSGCDAKMYPPMSTQ-------LEALGID---VYEGFDAAQLDEFKADVYVI 72 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHH-HHTTCEEEEEESSCCTTHHHH-------HHHTTCE---EEESCCGGGGGSCCCSEEEE
T ss_pred CcEEEEEEECHHHHHHHHHHH-HhCCCEEEEEcCCCCcHHHHH-------HHhCCCE---EECCCCHHHcCCCCCCEEEE
Confidence 478999999999996 89886 689999999998754321111 2222321 11112345555 57999987
Q ss_pred c--CC-CChhhh-------ccccHH-HHhc--CCC-CcEEEEcCCCcccCHHHHHHHHHcC
Q 020301 243 H--PV-LDKTTY-------HLINKE-RLAT--MKK-EAILVNCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 243 ~--~p-lt~~t~-------~li~~~-~~~~--mk~-ga~lIN~aRG~~vde~aL~~aL~~g 289 (328)
. +| .+|+-. .++++- .|.. ++. ..+-|--+.|..--..-|...|+..
T Consensus 73 Spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 73 GNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp CTTCCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CCCcCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 5 33 223221 234433 3343 332 2455555779888778788888764
No 398
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.14 E-value=0.071 Score=49.26 Aligned_cols=104 Identities=20% Similarity=0.294 Sum_probs=62.2
Q ss_pred EEEEEec-CHHHHHHHHHHHhcCC--cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc---cCCHHHHhhcCCEE
Q 020301 167 TVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREADVI 240 (328)
Q Consensus 167 tvgIiG~-G~IG~~vA~~l~~~fg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ell~~aDiV 240 (328)
+|+|+|. |.+|+.++..|+ .-| -+|..+|+.... .....+ . +...+..... ..++++.++.||+|
T Consensus 2 KI~IiGa~G~VG~~la~~L~-~~~~~~ev~L~Di~~~~---~~a~dL----~-~~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLK-NSPLVSRLTLYDIAHTP---GVAADL----S-HIETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHH-TCTTCSEEEEEESSSHH---HHHHHH----T-TSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred EEEEECCCChHHHHHHHHHH-hCCCCcEEEEEeCCccH---HHHHHH----h-ccCcCceEEEecCCCCHHHHhCCCCEE
Confidence 7999998 999999999875 445 689999997621 111111 1 1111211111 13688889999999
Q ss_pred EEcCCCChh---hh-cc--cc----H---HHHhcCCCCcEEEEcCCCcccCHHH
Q 020301 241 SLHPVLDKT---TY-HL--IN----K---ERLATMKKEAILVNCSRGPVIDEVA 281 (328)
Q Consensus 241 ~l~~plt~~---t~-~l--i~----~---~~~~~mk~ga~lIN~aRG~~vde~a 281 (328)
+++...... ++ .+ .| . +.+....|++++|++ ...+|.-.
T Consensus 73 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~~ 124 (314)
T 1mld_A 73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNSTI 124 (314)
T ss_dssp EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHHH
T ss_pred EECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchhH
Confidence 999753221 11 11 01 1 122233588999998 45666654
No 399
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.13 E-value=0.036 Score=50.90 Aligned_cols=38 Identities=24% Similarity=0.521 Sum_probs=32.2
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ 199 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~ 199 (328)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La-~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLT-RCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHH-HcCCCEEEEECCCc
Confidence 4689999999999999999999985 5564 788888764
No 400
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=95.13 E-value=0.053 Score=48.64 Aligned_cols=108 Identities=16% Similarity=0.181 Sum_probs=63.9
Q ss_pred cccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccc-cccC---CHHHHhh
Q 020301 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRAS---SMDEVLR 235 (328)
Q Consensus 161 ~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~l~ell~ 235 (328)
..+.||++.|.|. |-||+++|+.|+ .-|++|++.+++.....++..+.. +..+...... .... +++++++
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVNAAERAQAVVSEI----EQAGGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHH----HHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHH----HhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3689999999996 679999999985 779999998766544333322211 1111111000 0112 2334444
Q ss_pred -------cCCEEEEcCCCChh------h----hc----------cccHHHHhcCCCCcEEEEcCC
Q 020301 236 -------EADVISLHPVLDKT------T----YH----------LINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 236 -------~aDiV~l~~plt~~------t----~~----------li~~~~~~~mk~ga~lIN~aR 273 (328)
..|+++.+.-.... + .. .+-+..+..|+++..+||++.
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 68999887643211 0 11 123456677888888999865
No 401
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.13 E-value=0.1 Score=44.47 Aligned_cols=97 Identities=11% Similarity=0.020 Sum_probs=58.7
Q ss_pred EEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccc-cccCCHHHHhhcCCEEEEcC
Q 020301 167 TVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRASSMDEVLREADVISLHP 244 (328)
Q Consensus 167 tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ell~~aDiV~l~~ 244 (328)
++.|.|. |.||+.+++.|+ .-|.+|++.+|+.....+ . ...+...... ....+. +.+..+|+|+.+.
T Consensus 2 kilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~-~--------~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~a 70 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEAR-RRGHEVLAVVRDPQKAAD-R--------LGATVATLVKEPLVLTE-ADLDSVDAVVDAL 70 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHH-H--------TCTTSEEEECCGGGCCH-HHHTTCSEEEECC
T ss_pred EEEEEcCCCHHHHHHHHHHH-HCCCEEEEEEeccccccc-c--------cCCCceEEecccccccH-hhcccCCEEEECC
Confidence 6889997 999999999984 669999999998654211 0 0111111100 011112 6789999999888
Q ss_pred CCC--h---hhhccccHHHHhcCC-CCcEEEEcCCC
Q 020301 245 VLD--K---TTYHLINKERLATMK-KEAILVNCSRG 274 (328)
Q Consensus 245 plt--~---~t~~li~~~~~~~mk-~ga~lIN~aRG 274 (328)
... + ++.-......++.|+ .|..+|++|..
T Consensus 71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 653 1 111112245666664 34678888653
No 402
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.12 E-value=0.12 Score=49.87 Aligned_cols=120 Identities=18% Similarity=0.227 Sum_probs=70.3
Q ss_pred ccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEE-EcCC---------chhHHHHHHhhhhh--hhh--cCCCCCcccc
Q 020301 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLY---------QATRLEKFVTAYGQ--FLK--ANGEQPVTWK 225 (328)
Q Consensus 160 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~-~d~~---------~~~~~~~~~~~~~~--~~~--~~~~~~~~~~ 225 (328)
|.++.|+++.|.|+|++|+.+|+.| ..+|++|++ .|.+ ....+.++.+..+. +.. ..+. ..
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L-~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~----~~ 279 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWL-EKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDN----AE 279 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHH-HTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSC----CC
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccC----ce
Confidence 3478999999999999999999997 689999984 3431 11111111111100 000 0000 01
Q ss_pred ccCCHHHHh-hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 226 RASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 226 ~~~~l~ell-~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
...+.++++ ..||+++-|. +.+.|+.+...+++ =.+++--|-+++- .+|- +.|.+..+.
T Consensus 280 ~~~~~~~~~~~~~Dil~P~A-----~~~~I~~~~a~~l~-ak~V~EgAN~p~t-~~a~-~~l~~~Gi~ 339 (421)
T 1v9l_A 280 FVKNPDAIFKLDVDIFVPAA-----IENVIRGDNAGLVK-ARLVVEGANGPTT-PEAE-RILYERGVV 339 (421)
T ss_dssp CCSSTTGGGGCCCSEEEECS-----CSSCBCTTTTTTCC-CSEEECCSSSCBC-HHHH-HHHHTTTCE
T ss_pred EeCCchhhhcCCccEEEecC-----cCCccchhhHHHcC-ceEEEecCCCcCC-HHHH-HHHHHCCCE
Confidence 110234444 3799998875 35667777777775 4578888888864 4444 455555443
No 403
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.10 E-value=0.11 Score=48.76 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=58.2
Q ss_pred CCEEEEEe-cCHHHHHHHHHHHhcCC------cEEEEEcC-Cch-hHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh
Q 020301 165 GQTVGVIG-AGRIGSAYARMMVEGFK------MNLIYYDL-YQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (328)
Q Consensus 165 g~tvgIiG-~G~IG~~vA~~l~~~fg------~~V~~~d~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (328)
..+|+|+| .|.+|+.+.+.|. ..+ .++..... +.. +... +.|.. .. +........ .+. +.++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~-~~~~~~~~~~ei~~l~s~~~agk~~~---~~~~~-l~--~~~~~~~~~-~~~-~~~~ 79 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLL-GHPAYADGRLRIGALTAATSAGSTLG---EHHPH-LT--PLAHRVVEP-TEA-AVLG 79 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHH-TCHHHHTTSEEEEEEEESSCTTSBGG---GTCTT-CG--GGTTCBCEE-CCH-HHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHH-cCCCCCCccEEEEEEECCCcCCCchh---hhccc-cc--ccceeeecc-CCH-HHhc
Confidence 36899999 9999999999974 444 57666642 211 1111 00100 00 000111111 233 3466
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHH
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVAL 282 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL 282 (328)
.+|+|++|+|... ..+....++.|+.+|+.|--.-.+..+.
T Consensus 80 ~~DvVf~alg~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~ 120 (352)
T 2nqt_A 80 GHDAVFLALPHGH------SAVLAQQLSPETLIIDCGADFRLTDAAV 120 (352)
T ss_dssp TCSEEEECCTTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHH
T ss_pred CCCEEEECCCCcc------hHHHHHHHhCCCEEEEECCCccCCcchh
Confidence 8999999999542 3444444566899999875544444343
No 404
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.09 E-value=0.32 Score=46.74 Aligned_cols=113 Identities=20% Similarity=0.197 Sum_probs=71.1
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCC---------chhHHHHHHhhhhhhhhcCCCCCccccccCCH
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (328)
.++.|+++.|.|+|++|+.+|+.| ...|++|+ +.|.+ ....+.+..+..+ ..... .. +-
T Consensus 214 ~~l~gk~vaVqG~GnVG~~~a~~L-~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g------~v~~~---~~-~~ 282 (419)
T 3aoe_E 214 LDLRGARVVVQGLGQVGAAVALHA-ERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATG------SLPRL---DL-AP 282 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHS------SCSCC---CB-CT
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhC------Cccee---ec-cc
Confidence 468999999999999999999997 58899999 54552 1122222211111 01100 01 11
Q ss_pred HHHh-hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 231 DEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 231 ~ell-~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
++++ ..||+++-|.. .+.|+.+.-++++ =.+++.-|-+++- .+|- +.|.+..|.
T Consensus 283 ~e~~~~~~DVliP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~t-~~A~-~~L~~~Gi~ 337 (419)
T 3aoe_E 283 EEVFGLEAEVLVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGLN-PEAE-AYLLGKGAL 337 (419)
T ss_dssp TTGGGSSCSEEEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCBC-HHHH-HHHHHHTCE
T ss_pred hhhhccCceEEEeccc-----ccccccchHhhCC-ceEEEECCCCcCC-HHHH-HHHHHCCCE
Confidence 2333 47999988853 6678888888885 4589999998864 4444 445544443
No 405
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=95.09 E-value=0.031 Score=51.26 Aligned_cols=105 Identities=14% Similarity=0.056 Sum_probs=63.5
Q ss_pred CEEEEEec-CHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--cCCEEE
Q 020301 166 QTVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (328)
Q Consensus 166 ~tvgIiG~-G~IG~~vA~~l~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (328)
.++.|+|. |++|+.+++.+ ...|++ |...+|.... ....+...+.+++++.. ..|+++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l-~~~g~~~V~~VnP~~~g-----------------~~i~G~~vy~sl~el~~~~~~Dv~i 75 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKM-LECGTKIVGGVTPGKGG-----------------QNVHGVPVFDTVKEAVKETDANASV 75 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHH-HHTTCCEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHHCCCEEE
T ss_pred CEEEEECCCCCHHHHHHHHH-HhCCCeEEEEeCCCCCC-----------------ceECCEeeeCCHHHHhhcCCCCEEE
Confidence 34788899 99999999987 467887 3344543210 00012334578999998 899999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCcc
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGP-VIDEVALVEHLKQNPMF 292 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~-~vde~aL~~aL~~g~i~ 292 (328)
+++|. +.+...+ ++..++ +... +|..+-|- .-+++.|.++.++..+.
T Consensus 76 i~vp~-~~~~~~v-~ea~~~-Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 76 IFVPA-PFAKDAV-FEAIDA-GIEL-IVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp ECCCH-HHHHHHH-HHHHHT-TCSE-EEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred EccCH-HHHHHHH-HHHHHC-CCCE-EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 99992 2333333 344443 2222 34444442 23466888888875553
No 406
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.08 E-value=0.03 Score=51.76 Aligned_cols=93 Identities=16% Similarity=0.167 Sum_probs=60.4
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh------hc
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (328)
.|+++.|+| .|.||...++.+ +.+|++|++.+++.... ++...+ |..........++.+.+ ..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~--~~~~~~-------ga~~~~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLL-KMKGAHTIAVASTDEKL--KIAKEY-------GAEYLINASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSHHHH--HHHHHT-------TCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH--HHHHHc-------CCcEEEeCCCchHHHHHHHHhCCCC
Confidence 588999999 899999999985 79999999999876432 122222 22111111112333322 14
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.|+|+.++.. + .-...++.++++..+|.++
T Consensus 218 ~D~vid~~g~--~----~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 218 VDASFDSVGK--D----TFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEEECCGG--G----GHHHHHHHEEEEEEEEECC
T ss_pred ceEEEECCCh--H----HHHHHHHHhccCCEEEEEc
Confidence 7999888762 1 2355677888888888875
No 407
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.07 E-value=0.039 Score=52.03 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=45.4
Q ss_pred CEEEEEe-cCHHHHH-HH----HHHHhcCCcEE----------EEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC
Q 020301 166 QTVGVIG-AGRIGSA-YA----RMMVEGFKMNL----------IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~-vA----~~l~~~fg~~V----------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (328)
.+||||| +|.||+. .+ +.+.+.-+..+ .++|+++... ++..+.| +.. ..+.+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a-~~~a~~~-------~~~----~~~~~ 74 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKV-EALAKRF-------NIA----RWTTD 74 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHH-HHHHHHT-------TCC----CEESC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHH-HHHHHHh-------CCC----cccCC
Confidence 3799999 9999997 55 55433333443 4889887542 2222222 211 13579
Q ss_pred HHHHhhc--CCEEEEcCCC
Q 020301 230 MDEVLRE--ADVISLHPVL 246 (328)
Q Consensus 230 l~ell~~--aDiV~l~~pl 246 (328)
++++++. .|+|+++.|.
T Consensus 75 ~~~ll~~~~iD~V~i~tp~ 93 (383)
T 3oqb_A 75 LDAALADKNDTMFFDAATT 93 (383)
T ss_dssp HHHHHHCSSCCEEEECSCS
T ss_pred HHHHhcCCCCCEEEECCCc
Confidence 9999976 8999999994
No 408
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.05 E-value=0.022 Score=52.90 Aligned_cols=94 Identities=14% Similarity=0.103 Sum_probs=60.9
Q ss_pred CCCEEEEEecC-HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh------c
Q 020301 164 KGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (328)
Q Consensus 164 ~g~tvgIiG~G-~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (328)
.|++|.|+|.| .||...++.+ +.+|++|++.+++.... ++...+ |....-.....++.+.+. .
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~--~~~~~l-------ga~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLS-QILNFRLIAVTRNNKHT--EELLRL-------GAAYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSSTTH--HHHHHH-------TCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEeCCccHHHHHHHHHH-HHcCCEEEEEeCCHHHH--HHHHhC-------CCcEEEeCCcccHHHHHHHHhCCCC
Confidence 58899999998 9999999985 78999999999876532 111112 221111111123333222 5
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+|+.++.. +.+ ...++.++++..++.++-
T Consensus 214 ~Dvvid~~g~-~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 214 ADAAIDSIGG-PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEEEESSCH-HHH-----HHHHHTEEEEEEEEECCC
T ss_pred CcEEEECCCC-hhH-----HHHHHHhcCCCEEEEEee
Confidence 7999988762 222 344578899999999863
No 409
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.04 E-value=0.024 Score=53.20 Aligned_cols=94 Identities=16% Similarity=0.134 Sum_probs=61.6
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----cC
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (328)
.|+++.|+| .|.||..+++.+ +.+|++|++.+++.... ++...+ |..........++.+.+. ..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a-~~~Ga~Vi~~~~~~~~~--~~~~~~-------Ga~~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLS-KKAKCHVIGTCSSDEKS--AFLKSL-------GCDRPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHH-HHTTCEEEEEESSHHHH--HHHHHT-------TCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHH-HhCCCEEEEEECCHHHH--HHHHHc-------CCcEEEecCChhHHHHHHHhcCCCC
Confidence 478999999 799999999985 78999999999875432 111112 221111111134444443 47
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|+|+.++.. + .-...++.|+++..+|.++-
T Consensus 233 D~vid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 233 DVVYESVGG--A----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEEECSCT--H----HHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCH--H----HHHHHHHHHhcCCEEEEEeC
Confidence 999988873 1 22566778888888888764
No 410
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=95.03 E-value=0.082 Score=47.92 Aligned_cols=39 Identities=23% Similarity=0.123 Sum_probs=33.4
Q ss_pred cccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 161 ~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
..+.||++.|.|. |-||+++|+.|+ .-|++|++.++...
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~ 84 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYA-REGADVAINYLPAE 84 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCGGG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcc
Confidence 4689999999996 679999999985 77999999988743
No 411
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.02 E-value=0.045 Score=50.73 Aligned_cols=114 Identities=12% Similarity=0.115 Sum_probs=70.9
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHH----Hhh--c
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VLR--E 236 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e----ll~--~ 236 (328)
.|.++.|+|.|.+|...++.+ +.+ |.+|++.+++.... ++. ++-|........ .++.+ +.. .
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla-~~~g~~~Vi~~~~~~~~~--~~~-------~~lGa~~~i~~~-~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQIL-RAVSAARVIAVDLDDDRL--ALA-------REVGADAAVKSG-AGAADAIRELTGGQG 239 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHCCCEEEEEESCHHHH--HHH-------HHTTCSEEEECS-TTHHHHHHHHHGGGC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHH--HHH-------HHcCCCEEEcCC-CcHHHHHHHHhCCCC
Confidence 588999999999999999985 677 78999999876542 222 222322211111 12222 222 5
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCC------------------------cccCHHHHHHHHHcCCcc
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG------------------------PVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG------------------------~~vde~aL~~aL~~g~i~ 292 (328)
.|+|+-++.. +++ -...++.++++..++.++-. ..-+.+.+.+.+++|++.
T Consensus 240 ~d~v~d~~G~-~~~----~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~ 314 (345)
T 3jv7_A 240 ATAVFDFVGA-QST----IDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLD 314 (345)
T ss_dssp EEEEEESSCC-HHH----HHHHHHHEEEEEEEEECSCCTTCCEEESTTTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCC
T ss_pred CeEEEECCCC-HHH----HHHHHHHHhcCCEEEEECCCCCCCCCcCHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCc
Confidence 8999988873 211 23455666777777666421 112456788888999886
Q ss_pred E
Q 020301 293 R 293 (328)
Q Consensus 293 g 293 (328)
-
T Consensus 315 ~ 315 (345)
T 3jv7_A 315 I 315 (345)
T ss_dssp C
T ss_pred e
Confidence 4
No 412
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.99 E-value=0.031 Score=51.42 Aligned_cols=94 Identities=13% Similarity=0.084 Sum_probs=61.4
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh------hc
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (328)
.|+++.|+| .|.||..+++.+ +..|++|++.+++.... ++...+ |..........++.+.+ ..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~--~~~~~~-------Ga~~~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWA-KALGAKLIGTVSSPEKA--AHAKAL-------GAWETIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSHHHH--HHHHHH-------TCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHH--HHHHHc-------CCCEEEeCCCccHHHHHHHHhCCCC
Confidence 588999999 899999999985 78999999999876432 122222 22111111112333322 25
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+|+.++.. + .-...++.++++..++.++.
T Consensus 210 ~Dvvid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 210 CPVVYDGVGQ--D----TWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEEEESSCG--G----GHHHHHTTEEEEEEEEECCC
T ss_pred ceEEEECCCh--H----HHHHHHHHhcCCCEEEEEec
Confidence 8999988763 1 23467788889988888863
No 413
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.99 E-value=0.03 Score=44.58 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=65.5
Q ss_pred CEEEEEec----CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 166 QTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 166 ~tvgIiG~----G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
++++|||. |+.|..+.+.| +..|.+|+-.+|....- .+...+.++.++-. -|.++
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L-~~~g~~V~pVnP~~~~i-------------------~G~~~y~sl~dlp~-vDlav 63 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERL-KSHGHEFIPVGRKKGEV-------------------LGKTIINERPVIEG-VDTVT 63 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHH-HHHTCCEEEESSSCSEE-------------------TTEECBCSCCCCTT-CCEEE
T ss_pred CEEEEEccCCCCCCHHHHHHHHH-HHCCCeEEEECCCCCcC-------------------CCeeccCChHHCCC-CCEEE
Confidence 57999998 56899999997 57788999999864321 12223467777767 99999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
+++| .+.+..++. +..+ +...+++++. |- .++.+.+..++..+.
T Consensus 64 i~~p-~~~v~~~v~-e~~~-~g~k~v~~~~--G~--~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 64 LYIN-PQNQLSEYN-YILS-LKPKRVIFNP--GT--ENEELEEILSENGIE 107 (122)
T ss_dssp ECSC-HHHHGGGHH-HHHH-HCCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred EEeC-HHHHHHHHH-HHHh-cCCCEEEECC--CC--ChHHHHHHHHHcCCe
Confidence 9999 244555553 3333 3444676654 32 345666666665555
No 414
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.96 E-value=0.13 Score=49.84 Aligned_cols=90 Identities=17% Similarity=0.221 Sum_probs=61.5
Q ss_pred cccCCCEEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH
Q 020301 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (328)
Q Consensus 161 ~~l~g~tvgIiG~G----------~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (328)
..+.|++|+|+|+. .=...+++.| +..|++|.+|||...+.... .|+ .......++
T Consensus 329 ~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L-~~~Ga~V~~~DP~~~~~~~~---~~~----------~~~~~~~~~ 394 (444)
T 3vtf_A 329 GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLL-LERGARVYVHDPMAMEKARA---VLG----------DSVTYVEDP 394 (444)
T ss_dssp TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECSSTHHHHHH---HHG----------GGSEECSCH
T ss_pred cccCCCEEEEEeeecCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChHHHH---hcC----------CCceecCCH
Confidence 35899999999986 2366788987 68999999999986432211 111 112235689
Q ss_pred HHHhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 231 ~ell~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
++++++||.|+++.+- ++.+.+ + + ++.+++++ |+
T Consensus 395 ~~a~~~aDavvi~t~h-~ef~~l-d------~-~~~vv~D~-Rn 428 (444)
T 3vtf_A 395 QALLDQVEGVIIATAW-PQYEGL-D------Y-RGKVVVDG-RY 428 (444)
T ss_dssp HHHHHHCSEEEECSCC-GGGGGS-C------C-TTCEEEES-SC
T ss_pred HHHHhCCCEEEEccCC-HHHhCC-C------c-CCCEEEEC-CC
Confidence 9999999999999762 333332 1 2 36788885 43
No 415
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=94.96 E-value=0.047 Score=49.61 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=34.2
Q ss_pred cccCCCEEEEEecC---HHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 161 NLLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 161 ~~l~g~tvgIiG~G---~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
..+.||++.|.|.+ -||+++|+.|+ ..|++|++.+++..
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la-~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVC-AQGAEVALTYLSET 67 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHH-HCCCEEEEEeCChH
Confidence 46899999999986 79999999985 77999999998853
No 416
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.95 E-value=0.096 Score=44.46 Aligned_cols=97 Identities=10% Similarity=0.047 Sum_probs=59.2
Q ss_pred CEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccc-cccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ell~~aDiV~l~ 243 (328)
++|.|.| .|.||+.+++.|+ .-|.+|++.+|+.....+ . . .+...... ..-.+. +.+..+|+|+.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~-~--------~-~~~~~~~~D~~d~~~-~~~~~~d~vi~~ 68 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAK-NRGHEVTAIVRNAGKITQ-T--------H-KDINILQKDIFDLTL-SDLSDQNVVVDA 68 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCSHHHHH-H--------C-SSSEEEECCGGGCCH-HHHTTCSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHH-hCCCEEEEEEcCchhhhh-c--------c-CCCeEEeccccChhh-hhhcCCCEEEEC
Confidence 3689999 5999999999984 679999999998654211 0 0 11111100 011112 678999999998
Q ss_pred CCCChhhhc---cccHHHHhcCCC--CcEEEEcCCC
Q 020301 244 PVLDKTTYH---LINKERLATMKK--EAILVNCSRG 274 (328)
Q Consensus 244 ~plt~~t~~---li~~~~~~~mk~--ga~lIN~aRG 274 (328)
...+..... ......++.|+. ...+|++|..
T Consensus 69 ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 69 YGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp CCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred CcCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 876543221 112445566654 3677777654
No 417
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.91 E-value=0.037 Score=53.02 Aligned_cols=78 Identities=12% Similarity=0.061 Sum_probs=48.9
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCC---cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCc--cccccCCHHHHhhc--CC
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFK---MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLRE--AD 238 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~--aD 238 (328)
++++|+|.|.||+.+|+.|+ ..| .+|.++|++.... ++..+.+.... ....... ......++++++++ +|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~-~~g~~~~~V~v~~r~~~~~-~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMA-MNREVFSHITLASRTLSKC-QEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TCTTTCCEEEEEESCHHHH-HHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCceEEEEEECCHHHH-HHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 57999999999999999975 556 4999999986542 22222221100 0001000 01112357788888 99
Q ss_pred EEEEcCCC
Q 020301 239 VISLHPVL 246 (328)
Q Consensus 239 iV~l~~pl 246 (328)
+|+.+.|.
T Consensus 79 vVin~ag~ 86 (405)
T 4ina_A 79 IVLNIALP 86 (405)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99999883
No 418
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.89 E-value=0.017 Score=53.62 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=57.9
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcC--CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcccccc-CC-HHHHhh--cC
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SS-MDEVLR--EA 237 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~f--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-l~ell~--~a 237 (328)
.|.+|.|+|.|.+|...++.+ +.+ |++|++.+++.... ++...+ |....-.... .+ .+++-. ..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqla-k~~~~Ga~Vi~~~~~~~~~--~~~~~l-------Ga~~vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQIL-KALMKNITIVGISRSKKHR--DFALEL-------GADYVSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHH-HHHCTTCEEEEECSCHHHH--HHHHHH-------TCSEEECHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHhcCCCEEEEEeCCHHHH--HHHHHh-------CCCEEeccccchHHHHHhhcCCCc
Confidence 688999999999999999985 788 99999999876432 111222 2211100000 01 122221 57
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
|+|+-++.. +++ -+..++.++++..++.++
T Consensus 240 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 240 SIAIDLVGT-EET----TYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEESSCC-HHH----HHHHHHHEEEEEEEEECC
T ss_pred cEEEECCCC-hHH----HHHHHHHhhcCCEEEEeC
Confidence 999988873 211 244566777777777665
No 419
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.89 E-value=0.026 Score=51.21 Aligned_cols=74 Identities=20% Similarity=0.125 Sum_probs=45.1
Q ss_pred CEEEEEec-CHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEc
Q 020301 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (328)
Q Consensus 166 ~tvgIiG~-G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (328)
.+|+|+|+ |+||+.+++.+...-|+++. ++|+......... ..+..+....+.....++++++..+|+|+-+
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d------~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDf 79 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSD------AGELAGAGKTGVTVQSSLDAVKDDFDVFIDF 79 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCC------TTCSSSSSCCSCCEESCSTTTTTSCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhh------HHHHcCCCcCCceecCCHHHHhcCCCEEEEc
Confidence 47999999 99999999976545688877 6776542100000 0000011111222245788888899999955
Q ss_pred CC
Q 020301 244 PV 245 (328)
Q Consensus 244 ~p 245 (328)
.+
T Consensus 80 t~ 81 (273)
T 1dih_A 80 TR 81 (273)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 420
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.88 E-value=0.13 Score=47.75 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=59.1
Q ss_pred CEEEEEec-CHHHHHHHHHHHhcCCc-------EEEEEcCCc---hhHHHHHHhhhhhhhhcCCC-CCccccccCCHHHH
Q 020301 166 QTVGVIGA-GRIGSAYARMMVEGFKM-------NLIYYDLYQ---ATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEV 233 (328)
Q Consensus 166 ~tvgIiG~-G~IG~~vA~~l~~~fg~-------~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~el 233 (328)
.+|.|+|. |.+|+.++..|+ .-|+ +|..+|+.. ....+.....+ .+... .........++.+.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~-~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl----~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIA-NGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI----DDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHH-TTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHH----HTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCcCCCCCCEEEEEcCCCccccccchhhHHHH----hhhcccccCcEEEecCcHHH
Confidence 58999998 999999999874 4554 899999871 12122111111 11000 01112223678899
Q ss_pred hhcCCEEEEcCCCChh---hhc-c--cc----H---HHHhcC-CCCcEEEEcC
Q 020301 234 LREADVISLHPVLDKT---TYH-L--IN----K---ERLATM-KKEAILVNCS 272 (328)
Q Consensus 234 l~~aDiV~l~~plt~~---t~~-l--i~----~---~~~~~m-k~ga~lIN~a 272 (328)
++.||+|+.+...... ++. + .| . +.+.+. +|.+++|+++
T Consensus 81 l~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 81 FKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 9999999887653221 110 1 11 1 122333 4789999997
No 421
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.88 E-value=0.044 Score=51.35 Aligned_cols=30 Identities=23% Similarity=0.455 Sum_probs=24.3
Q ss_pred EEEEEecCHHHHHHHHHHHhc--CCcEEEEEc
Q 020301 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYD 196 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~--fg~~V~~~d 196 (328)
+|||+|+|+||+.+.|.|... -+++|.+.+
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 799999999999999987433 358887654
No 422
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=94.86 E-value=0.03 Score=50.18 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=33.1
Q ss_pred ccCCCEEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 162 ~l~g~tvgIiG~---G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
.+.||++.|.|. |-||+++|+.|+ .-|++|+..+|+..
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~-~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCF-NQGATLAFTYLNES 43 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHH-TTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEeCCHH
Confidence 477999999998 699999999985 67999999998764
No 423
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=94.84 E-value=0.3 Score=45.01 Aligned_cols=106 Identities=17% Similarity=0.221 Sum_probs=67.0
Q ss_pred ccCCCEEEEEec---CHHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcC
Q 020301 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (328)
Q Consensus 162 ~l~g~tvgIiG~---G~IG~~vA~~l~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (328)
.+.|.+|++||= |++..+.+..+ ..| |++|.+..|..-...+...+ .++..|. ......++++.++.|
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~-~~~~G~~v~~~~P~~~~~~~~~~~----~~~~~g~---~~~~~~d~~eav~~a 219 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYAL-SLFENVEMYFVSPKELRLPKDIIE----DLKAKNI---KFYEKESLDDLDDDI 219 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHH----HHHHTTC---CEEEESCGGGCCTTC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHH-HhcCCCEEEEECCcccccCHHHHH----HHHHcCC---EEEEEcCHHHHhcCC
Confidence 478999999997 58999999986 689 99999998853211111111 1122221 122346899999999
Q ss_pred CEEEEcC------CCChhh-----hccccHHHHhcCCCCcEEEEcC-CCccc
Q 020301 238 DVISLHP------VLDKTT-----YHLINKERLATMKKEAILVNCS-RGPVI 277 (328)
Q Consensus 238 DiV~l~~------plt~~t-----~~li~~~~~~~mk~ga~lIN~a-RG~~v 277 (328)
|+|.... |...+- ..-+|.+.+++ ++++|.-+. ||.=|
T Consensus 220 Dvvy~~~~q~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~lPRg~EI 269 (306)
T 4ekn_B 220 DVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHPLPRVDEI 269 (306)
T ss_dssp SEEEECCCCGGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECCSCCSSSB
T ss_pred CEEEeCCcccccCCCHHHHHHhccCcEECHHHHcC--CCCEEECCCCCCCee
Confidence 9998643 211111 13367888876 777777553 55433
No 424
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.80 E-value=0.046 Score=52.00 Aligned_cols=31 Identities=23% Similarity=0.409 Sum_probs=24.7
Q ss_pred EEEEEecCHHHHHHHHHHHhc--CCcEEEEEcC
Q 020301 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~--fg~~V~~~d~ 197 (328)
+|||+|+|+||+.++|.|... -+++|.+.+.
T Consensus 4 kVgInGfGrIGr~vlR~l~~~~~~~veIVaInd 36 (380)
T 2d2i_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINN 36 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHhcCCCCCEEEEEEec
Confidence 799999999999999986433 3588877643
No 425
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.79 E-value=0.024 Score=52.56 Aligned_cols=71 Identities=15% Similarity=0.103 Sum_probs=45.3
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc--CCEEEE
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVISL 242 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~l 242 (328)
.++||||+|.+|+..++.+ .-+++|. ++|+++....+...+. .++.+. ....+.+++++++. .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKA----ISEMNI---KPKKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHH----HHTTTC---CCEECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHH----HHHcCC---CCcccCCHHHHhcCCCCCEEEE
Confidence 4799999999999777663 4578876 5787753111111110 111121 11246799999975 899999
Q ss_pred cCC
Q 020301 243 HPV 245 (328)
Q Consensus 243 ~~p 245 (328)
+.|
T Consensus 74 ~tp 76 (337)
T 3ip3_A 74 NTV 76 (337)
T ss_dssp CSS
T ss_pred eCC
Confidence 988
No 426
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.74 E-value=0.11 Score=48.46 Aligned_cols=97 Identities=15% Similarity=0.079 Sum_probs=59.4
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhcCCCCCcccc--ccCCHHHHh------
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK--RASSMDEVL------ 234 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ell------ 234 (328)
.|.+|.|+|.|.+|...++.+ +.+|++ |++.+++..+. ++...+. ......... ...++.+.+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~a~~l~-----~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCA-KAAGACPLVITDIDEGRL--KFAKEIC-----PEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEEESCHHHH--HHHHHHC-----TTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH--HHHHHhc-----hhcccccccccchHHHHHHHHHHhCC
Confidence 478999999999999999984 899998 99998876432 1111110 000000000 001122222
Q ss_pred hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 235 ~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
...|+|+-++.. +.+ -...++.++++..++.++-
T Consensus 251 ~g~Dvvid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 251 IEPAVALECTGV-ESS----IAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCCSEEEECSCC-HHH----HHHHHHHSCTTCEEEECCC
T ss_pred CCCCEEEECCCC-hHH----HHHHHHHhcCCCEEEEEcc
Confidence 258999988773 221 2456778899999998864
No 427
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.74 E-value=0.045 Score=50.27 Aligned_cols=94 Identities=13% Similarity=0.090 Sum_probs=60.0
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHH-HHhh-----c
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD-EVLR-----E 236 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-ell~-----~ 236 (328)
.|+++.|+| .|.||..+++.+ +..|++|++.+++.... + ....+ +..........++. ++.+ .
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~V~~~~~~~~~~-~-~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWA-KALGAKLIGTVGTAQKA-Q-SALKA-------GAWQVINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHHTCEEEEEESSHHHH-H-HHHHH-------TCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH-H-HHHHc-------CCCEEEECCCccHHHHHHHHhCCCC
Confidence 488999999 799999999986 78899999999875432 1 11111 21111111112222 2221 4
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+++.+.. .++ -+..++.|+++..++.++.
T Consensus 210 ~D~vi~~~g--~~~----~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 210 VRVVYDSVG--RDT----WERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEEECSC--GGG----HHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECCc--hHH----HHHHHHHhcCCCEEEEEec
Confidence 799998876 222 2567788888888888763
No 428
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.73 E-value=0.14 Score=49.88 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=67.9
Q ss_pred ccCCCEEEEEecCH----------HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcC-CCC-CccccccCC
Q 020301 162 LLKGQTVGVIGAGR----------IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKAN-GEQ-PVTWKRASS 229 (328)
Q Consensus 162 ~l~g~tvgIiG~G~----------IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 229 (328)
.+.|++|+|+|+.- -...+++.| ...|++|.+|||...... ....|. ..... +.. ........+
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~ 401 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYL-MDEGAHLHIYDPKVPREQ--IVVDLS-HPGVSEDDQVSRLVTISKD 401 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHH--HHHHHC-C------CHHHHHEEECSS
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHH-HHCCCEEEEEcCccCHHH--Hhhhhc-cccccccccccCceeecCC
Confidence 47899999999873 677899987 689999999999853321 001110 00000 000 001122347
Q ss_pred HHHHhhcCCEEEEcCCCChhhhccccHHHH-hcCCCCcEEEEcCCCcccCH
Q 020301 230 MDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDE 279 (328)
Q Consensus 230 l~ell~~aDiV~l~~plt~~t~~li~~~~~-~~mk~ga~lIN~aRG~~vde 279 (328)
+++.++.||.|+++..- ++.+. ++-+.+ +.|+...+++++ |+ ++|.
T Consensus 402 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~ 448 (467)
T 2q3e_A 402 PYEACDGAHAVVICTEW-DMFKE-LDYERIHKKMLKPAFIFDG-RR-VLDG 448 (467)
T ss_dssp HHHHHTTCSEEEECSCC-GGGGG-SCHHHHHHHSCSSCEEEES-SC-TTTT
T ss_pred HHHHHhCCcEEEEecCC-hhhhc-CCHHHHHHhcCCCCEEEeC-CC-cCCc
Confidence 88899999999999873 45544 454444 567776668887 55 3444
No 429
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.71 E-value=0.03 Score=53.12 Aligned_cols=68 Identities=18% Similarity=0.214 Sum_probs=47.1
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcC--CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~f--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
-.+|||||.| +|+.-++.+ +.. ++++. ++|++... .+++.+.| |. ..+.++++++...|+++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~-~~~~~~~elvav~~~~~~~-a~~~a~~~-------gv-----~~~~~~~~l~~~~D~v~ 71 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAF-MQPPEGLELVGLLAQGSAR-SRELAHAF-------GI-----PLYTSPEQITGMPDIAC 71 (372)
T ss_dssp CEEEEEECST-TTHHHHHTT-SSCCTTEEEEEEECCSSHH-HHHHHHHT-------TC-----CEESSGGGCCSCCSEEE
T ss_pred CCEEEEEehH-HHHHHHHHH-HhCCCCeEEEEEECCCHHH-HHHHHHHh-------CC-----CEECCHHHHhcCCCEEE
Confidence 3579999999 799877765 344 67876 56887643 23333333 22 23579999999999999
Q ss_pred EcCCCC
Q 020301 242 LHPVLD 247 (328)
Q Consensus 242 l~~plt 247 (328)
+++|..
T Consensus 72 i~~p~~ 77 (372)
T 4gmf_A 72 IVVRST 77 (372)
T ss_dssp ECCC--
T ss_pred EECCCc
Confidence 999843
No 430
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.69 E-value=0.048 Score=51.48 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=57.3
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCC-cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc---cCCHHH----Hhh
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDE----VLR 235 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~e----ll~ 235 (328)
.|.+|.|+|.|.+|...++.+ +.+| .+|++.+++.... ++...+ |....-... ..++.+ +..
T Consensus 195 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~~~~l-------Ga~~vi~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIA-RSLGAENVIVIAGSPNRL--KLAEEI-------GADLTLNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHH-HHTTBSEEEEEESCHHHH--HHHHHT-------TCSEEEETTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHH-HHcCCceEEEEcCCHHHH--HHHHHc-------CCcEEEeccccCcchHHHHHHHHhC
Confidence 478999999999999999984 8999 5999999876432 111222 221110000 012222 221
Q ss_pred --cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 236 --EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 236 --~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
..|+|+-++..... -...++.++++..+|.++.
T Consensus 265 g~g~Dvvid~~g~~~~-----~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 265 GRGADFILEATGDSRA-----LLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TSCEEEEEECSSCTTH-----HHHHHHHEEEEEEEEECCC
T ss_pred CCCCcEEEECCCCHHH-----HHHHHHHHhcCCEEEEEec
Confidence 47999988763221 1345566677777776653
No 431
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.69 E-value=0.17 Score=44.71 Aligned_cols=38 Identities=24% Similarity=0.303 Sum_probs=32.7
Q ss_pred ccCCCEEEEEec-CH--HHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 162 LLKGQTVGVIGA-GR--IGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 162 ~l~g~tvgIiG~-G~--IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
++.||++.|.|. |. ||+++|+.|+ .-|++|+..+++..
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~ 44 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLH-EAGARLIFTYAGER 44 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEecCchH
Confidence 588999999997 45 9999999985 67999999988753
No 432
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=94.66 E-value=0.065 Score=47.82 Aligned_cols=111 Identities=16% Similarity=0.199 Sum_probs=64.9
Q ss_pred ccccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccc-cccC---CHHHHh
Q 020301 160 GNLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRAS---SMDEVL 234 (328)
Q Consensus 160 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~l~ell 234 (328)
...+.||++.|.|. |-||+++|+.|+ .-|++|++.+++.....++..+. .+..+...... .... ++++++
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~ 87 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVSE----IKALGSDAIAIKADIRQVPEIVKLF 87 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHH----HHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHH----HHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 35799999999987 579999999985 78999999776554433322221 11111110000 0112 233444
Q ss_pred h-------cCCEEEEcCCCCh---------hh-hc----------cccHHHHhcCCCCcEEEEcCCCc
Q 020301 235 R-------EADVISLHPVLDK---------TT-YH----------LINKERLATMKKEAILVNCSRGP 275 (328)
Q Consensus 235 ~-------~aDiV~l~~plt~---------~t-~~----------li~~~~~~~mk~ga~lIN~aRG~ 275 (328)
+ .-|+++.+.-... +. .. .+.+..+..|+++..+||++...
T Consensus 88 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 88 DQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 4 5699987654321 10 01 12355677888888899987643
No 433
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.64 E-value=0.1 Score=50.23 Aligned_cols=97 Identities=22% Similarity=0.125 Sum_probs=60.3
Q ss_pred CCCEEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHHH-HHHhhhhhhhhcCCCCCccccccCCHHH
Q 020301 164 KGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLE-KFVTAYGQFLKANGEQPVTWKRASSMDE 232 (328)
Q Consensus 164 ~g~tvgIiG~G----------~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~e 232 (328)
.|++|+|+|+. .-...+++.| ...|++|.+|||....... .....|+.. ...........++++
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 386 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEML-IGKGYELRIFDRNVEYARVHGANKEYIES----KIPHVSSLLVSDLDE 386 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECHHHHHHTTSSSCHHHHHH----TSHHHHTTBCSCHHH
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChhhccchhhhhccc----ccccccccccCCHHH
Confidence 68999999997 5678899997 6899999999997432100 000011100 000000012357889
Q ss_pred HhhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEc
Q 020301 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (328)
Q Consensus 233 ll~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~ 271 (328)
.++.||+|+++..- ++.+.+ + .+.|+ +.+++++
T Consensus 387 ~~~~~d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 387 VVASSDVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp HHHHCSEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred HHhCCcEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 99999999999873 343331 2 44566 6788887
No 434
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.63 E-value=0.036 Score=51.78 Aligned_cols=94 Identities=12% Similarity=0.115 Sum_probs=58.5
Q ss_pred cCCCEEEEEecCHHHHHH-HHHHH-hcCCcE-EEEEcCCch---hHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-
Q 020301 163 LKGQTVGVIGAGRIGSAY-ARMMV-EGFKMN-LIYYDLYQA---TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR- 235 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~v-A~~l~-~~fg~~-V~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~- 235 (328)
..+.+|.|+|.|.+|... ++. + +.+|++ |++.+++.. .. ++...+ |.... .....++.+ +.
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iql-a~k~~Ga~~Vi~~~~~~~~~~~~--~~~~~l-------Ga~~v-~~~~~~~~~-i~~ 238 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAML-KVDDKGYENLYCLGRRDRPDPTI--DIIEEL-------DATYV-DSRQTPVED-VPD 238 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHH-HHCTTCCCEEEEEECCCSSCHHH--HHHHHT-------TCEEE-ETTTSCGGG-HHH
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHHHcCCcEEEEEeCCcccHHHH--HHHHHc-------CCccc-CCCccCHHH-HHH
Confidence 345899999999999999 887 6 789997 999998764 21 122222 22111 111123333 22
Q ss_pred ---cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 236 ---EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 236 ---~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
..|+|+-++.. +.+ -...++.++++..++.++-
T Consensus 239 ~~gg~Dvvid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 239 VYEQMDFIYEATGF-PKH----AIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp HSCCEEEEEECSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred hCCCCCEEEECCCC-hHH----HHHHHHHHhcCCEEEEEeC
Confidence 47999888763 221 2445666777777777653
No 435
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.61 E-value=0.16 Score=47.58 Aligned_cols=96 Identities=19% Similarity=0.188 Sum_probs=60.8
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh---hcCCE
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL---READV 239 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell---~~aDi 239 (328)
.|++|.|+| .|.||...++.+ +.+|++|++.+. ... . ++...+ |..........++.+.+ ...|+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla-~~~Ga~Vi~~~~-~~~-~-~~~~~l-------Ga~~v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVM-KAWDAHVTAVCS-QDA-S-ELVRKL-------GADDVIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEC-GGG-H-HHHHHT-------TCSEEEETTSSCHHHHHHTSCCBSE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HhCCCEEEEEeC-hHH-H-HHHHHc-------CCCEEEECCchHHHHHHhhcCCCCE
Confidence 589999999 799999999985 789999998873 322 1 222222 22111111112343333 35899
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
|+-++.....+ -...+..++++..+|.++..
T Consensus 252 vid~~g~~~~~----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 252 ILDNVGGSTET----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp EEESSCTTHHH----HGGGGBCSSSCCEEEESCCS
T ss_pred EEECCCChhhh----hHHHHHhhcCCcEEEEeCCC
Confidence 99988743121 13456788999999998743
No 436
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.60 E-value=0.058 Score=50.66 Aligned_cols=99 Identities=16% Similarity=0.238 Sum_probs=50.7
Q ss_pred CEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEc-CCchhHHHHHHhhhhhhhhcC----CCCCccccccCCHHHHhhcCCE
Q 020301 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYD-LYQATRLEKFVTAYGQFLKAN----GEQPVTWKRASSMDEVLREADV 239 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~ell~~aDi 239 (328)
.+|||+| +|.||+.+.+.|...=.+++.+.. ..... ...+.+.|+ +.... +.....+.. .+.++ +..+|+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~-~d~~~-~~~vDv 80 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKI-GKKYKDAVK-WIEQGDIPEEVQDLPIVS-TNYED-HKDVDV 80 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGT-TSBHHHHCC-CCSSSSCCHHHHTCBEEC-SSGGG-GTTCSE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhc-CCCHHHhcC-cccccccccCCceeEEee-CCHHH-hcCCCE
Confidence 4799999 899999999987433356877663 22111 011111111 00000 000011111 13344 478999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
|++|+|.. .+.. +-... ++.|+.+|+.+-
T Consensus 81 Vf~atp~~-~s~~-~a~~~---~~aG~~VId~s~ 109 (350)
T 2ep5_A 81 VLSALPNE-LAES-IELEL---VKNGKIVVSNAS 109 (350)
T ss_dssp EEECCCHH-HHHH-HHHHH---HHTTCEEEECSS
T ss_pred EEECCChH-HHHH-HHHHH---HHCCCEEEECCc
Confidence 99999832 2222 21222 345777888763
No 437
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.60 E-value=0.066 Score=50.69 Aligned_cols=99 Identities=19% Similarity=0.127 Sum_probs=60.4
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh----h--c
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----R--E 236 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell----~--~ 236 (328)
.|.+|.|+|.|.+|...++. ++.+|+ +|++.|++.... ++.. +-|..........++.+.+ . .
T Consensus 185 ~g~~VlV~GaG~vG~~aiql-Ak~~Ga~~Vi~~~~~~~~~--~~a~-------~lGa~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAAS-ARLLGAAVVIVGDLNPARL--AHAK-------AQGFEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEEESCHHHH--HHHH-------HTTCEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCEEEEECCcHHHHHHHHH-HHHCCCCeEEEEcCCHHHH--HHHH-------HcCCcEEccCCcchHHHHHHHHhCCCC
Confidence 47899999999999999998 489999 799998876432 1222 2232211111111233222 1 4
Q ss_pred CCEEEEcCCCChhh-----hc-----cccHHHHhcCCCCcEEEEcC
Q 020301 237 ADVISLHPVLDKTT-----YH-----LINKERLATMKKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~plt~~t-----~~-----li~~~~~~~mk~ga~lIN~a 272 (328)
.|+|+-++...... .+ -.-...++.++++..++.++
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 79999988743100 00 01246677888888888765
No 438
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.58 E-value=0.088 Score=48.85 Aligned_cols=92 Identities=12% Similarity=0.080 Sum_probs=60.1
Q ss_pred CEEEEE-ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh------hcCC
Q 020301 166 QTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------READ 238 (328)
Q Consensus 166 ~tvgIi-G~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~aD 238 (328)
+++.|. |.|.||...++.+ +.+|++|++.+++.... ++...+ |..........++.+.+ ...|
T Consensus 166 ~~vli~gg~g~vG~~a~qla-~~~Ga~Vi~~~~~~~~~--~~~~~~-------Ga~~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLA-KEEGFRPIVTVRRDEQI--ALLKDI-------GAAHVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESCGGGH--HHHHHH-------TCSEEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHH--HHHHHc-------CCCEEEECCcHHHHHHHHHHhcCCCCc
Confidence 567665 9999999999985 78999999999876542 111222 22111111112333332 2699
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
+|+-++.. +. + ...++.++++..+|.++.
T Consensus 236 ~vid~~g~-~~----~-~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 236 IFLDAVTG-PL----A-SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEEESSCH-HH----H-HHHHHHSCTTCEEEECCC
T ss_pred EEEECCCC-hh----H-HHHHhhhcCCCEEEEEec
Confidence 99988762 21 2 667899999999999973
No 439
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=94.57 E-value=0.71 Score=44.79 Aligned_cols=133 Identities=17% Similarity=0.180 Sum_probs=93.0
Q ss_pred CCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEecCHHHHHHHHHHHhc
Q 020301 108 YGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEG 187 (328)
Q Consensus 108 ~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~ 187 (328)
..|+|.|+-- +.+|=-+++-+++.+|- .|..|...++.|.|.|.-|-.+|+.+ ..
T Consensus 186 ~~ipvFnDD~---qGTA~V~lAgllnAlki---------------------~gk~l~d~riV~~GAGaAGigia~ll-~~ 240 (487)
T 3nv9_A 186 CDIPVWHDDQ---QGTASVTLAGLLNALKL---------------------VKKDIHECRMVFIGAGSSNTTCLRLI-VT 240 (487)
T ss_dssp CSSCEEETTT---HHHHHHHHHHHHHHHHH---------------------HTCCGGGCCEEEECCSHHHHHHHHHH-HH
T ss_pred ccCCcccccc---chHHHHHHHHHHHHHHH---------------------hCCChhhcEEEEECCCHHHHHHHHHH-HH
Confidence 4799999753 45677788888877763 24578889999999999999999997 57
Q ss_pred CCc---EEEEEcCCc----h-hHHHH-----HHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCChhhhccc
Q 020301 188 FKM---NLIYYDLYQ----A-TRLEK-----FVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (328)
Q Consensus 188 fg~---~V~~~d~~~----~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~~t~~li 254 (328)
.|. +++.+|+.- . ..... +...| ++.... ....+|.|+++.+|+++=. .. . ..+.|
T Consensus 241 ~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~---A~~~n~-----~~~~~L~eav~~adVlIG~-S~-~-~pg~f 309 (487)
T 3nv9_A 241 AGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEI---CETTNP-----SKFGSIAEACVGADVLISL-ST-P-GPGVV 309 (487)
T ss_dssp TTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHH---HHHSCT-----TCCCSHHHHHTTCSEEEEC-CC-S-SCCCC
T ss_pred cCCCcccEEEEeccccccCCcchhhhhcccHHHHHH---HHhccc-----ccCCCHHHHHhcCCEEEEe-cc-c-CCCCC
Confidence 898 899999752 1 11111 00111 111110 0235899999999977533 21 1 25789
Q ss_pred cHHHHhcCCCCcEEEEcCCCcc
Q 020301 255 NKERLATMKKEAILVNCSRGPV 276 (328)
Q Consensus 255 ~~~~~~~mk~ga~lIN~aRG~~ 276 (328)
.++.++.|.+..++.=.|.-..
T Consensus 310 t~e~V~~Ma~~PIIFaLSNPtp 331 (487)
T 3nv9_A 310 KAEWIKSMGEKPIVFCCANPVP 331 (487)
T ss_dssp CHHHHHTSCSSCEEEECCSSSC
T ss_pred CHHHHHhhcCCCEEEECCCCCc
Confidence 9999999999999998887653
No 440
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=94.57 E-value=0.079 Score=48.06 Aligned_cols=38 Identities=18% Similarity=0.187 Sum_probs=32.9
Q ss_pred cccCCCEEEEEecC-H--HHHHHHHHHHhcCCcEEEEEcCCc
Q 020301 161 NLLKGQTVGVIGAG-R--IGSAYARMMVEGFKMNLIYYDLYQ 199 (328)
Q Consensus 161 ~~l~g~tvgIiG~G-~--IG~~vA~~l~~~fg~~V~~~d~~~ 199 (328)
..+.||++.|.|.+ . ||+++|+.|+ .-|++|++.+++.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la-~~G~~V~~~~r~~ 67 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAR-EAGAELAFTYQGD 67 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHH-HTTCEEEEEECSH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEEcCCH
Confidence 35899999999984 4 9999999985 7799999999874
No 441
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.56 E-value=0.052 Score=50.32 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=59.4
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHH----Hh--hc
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VL--RE 236 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e----ll--~~ 236 (328)
.|+++.|+|. |.||+.+++.+ +.+|++|++.+++.... +....+ |..........++.+ +. ..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a-~~~G~~Vi~~~~~~~~~--~~~~~~-------ga~~~~d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIA-KLFGARVIATAGSEDKL--RRAKAL-------GADETVNYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHH-HHTTCEEEEEESSHHHH--HHHHHH-------TCSEEEETTSTTHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCEEEEEeCCHHHH--HHHHhc-------CCCEEEcCCcccHHHHHHHHhCCCC
Confidence 5889999999 99999999985 78999999999876432 111112 211110111123322 22 25
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+|+.+.. . + .-...++.|+++..++.++.
T Consensus 236 ~d~vi~~~g-~-~----~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 236 ADKVVDHTG-A-L----YFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEEEEESSC-S-S----SHHHHHHHEEEEEEEEESSC
T ss_pred ceEEEECCC-H-H----HHHHHHHhhccCCEEEEEec
Confidence 799988876 2 2 23556677778878877753
No 442
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.55 E-value=0.045 Score=50.63 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=60.1
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccc-cccCCHHHHhh-----c
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRASSMDEVLR-----E 236 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ell~-----~ 236 (328)
.|+++.|+|. |.||+.+++.+ +.+|++|++.+++.... + ... +.-|...... ....++.+.+. .
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a-~~~G~~V~~~~~~~~~~-~-~~~------~~~g~~~~~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLA-KMMGCYVVGSAGSKEKV-D-LLK------TKFGFDDAFNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH-H-HHH------HTSCCSEEEETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHH-H-HHH------HHcCCceEEecCCHHHHHHHHHHHhCCC
Confidence 5889999997 99999999985 78999999999876432 1 111 0112211111 11123444333 4
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.|+|+.+... + .-...++.++++..++.++
T Consensus 226 ~d~vi~~~g~-~-----~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 226 IDIYFENVGG-K-----MLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEEESSCH-H-----HHHHHHTTEEEEEEEEECC
T ss_pred CcEEEECCCH-H-----HHHHHHHHHhcCCEEEEEc
Confidence 7999988762 2 2356677888888888775
No 443
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=94.54 E-value=0.064 Score=49.23 Aligned_cols=105 Identities=18% Similarity=0.091 Sum_probs=62.6
Q ss_pred CEEEEEec-CHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh--c-CCEE
Q 020301 166 QTVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E-ADVI 240 (328)
Q Consensus 166 ~tvgIiG~-G~IG~~vA~~l~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~-aDiV 240 (328)
.++.|+|. |++|+.+++.+ ...|++ |...+|.... ....+...+.+++++.. . .|++
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l-~~~g~~~v~~VnP~~~g-----------------~~i~G~~vy~sl~el~~~~~~~Dva 75 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAM-LEYGTKVVAGVTPGKGG-----------------SEVHGVPVYDSVKEALAEHPEINTS 75 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHCTTCCEE
T ss_pred CEEEEECCCCCHHHHHHHHH-HhCCCcEEEEeCCCCCC-----------------ceECCEeeeCCHHHHhhcCCCCCEE
Confidence 34777798 99999999987 456887 3355543210 00112334578999987 5 9999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCcc
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP-VIDEVALVEHLKQNPMF 292 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~-~vde~aL~~aL~~g~i~ 292 (328)
++++|. +.+...+ ++..++=.+. +|..+-|- .-+++.|.++.++..+.
T Consensus 76 Ii~vp~-~~~~~~v-~ea~~~Gi~~--vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 76 IVFVPA-PFAPDAV-YEAVDAGIRL--VVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp EECCCG-GGHHHHH-HHHHHTTCSE--EEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred EEecCH-HHHHHHH-HHHHHCCCCE--EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 999993 3334433 3333322222 33444442 23456888888875553
No 444
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=94.51 E-value=3 Score=38.61 Aligned_cols=137 Identities=11% Similarity=0.035 Sum_probs=86.9
Q ss_pred HHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEE-----EecCHHHHH
Q 020301 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV-----IGAGRIGSA 179 (328)
Q Consensus 105 ~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgI-----iG~G~IG~~ 179 (328)
++--+|+|.|.-+....+. .+++=++.+.+++ | + ..+. .+|++ +|=+++.++
T Consensus 131 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g----~-------~~l~-l~ia~a~~~~vGD~rva~S 187 (324)
T 1js1_X 131 IQHSGRPVFSMEAATRHPL--QSFADLITIEEYK---------K----T-------ARPK-VVMTWAPHPRPLPQAVPNS 187 (324)
T ss_dssp HHHSSSCEEESSCSSCCHH--HHHHHHHHHHHHC---------S----S-------SSCE-EEEECCCCSSCCCSHHHHH
T ss_pred HhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHc---------C----C-------CCee-EEEEEEcccccCCcchHHH
Confidence 3445799999666433333 2333334333321 1 0 1366 88999 999999999
Q ss_pred HHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE-cCCCC-h---------
Q 020301 180 YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL-HPVLD-K--------- 248 (328)
Q Consensus 180 vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l-~~plt-~--------- 248 (328)
.+..+ ..||++|.+..|..-...+... .......++++.+++||+|.. ..... .
T Consensus 188 l~~~~-~~~G~~v~~~~P~~~~~~~~~~--------------~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r 252 (324)
T 1js1_X 188 FAEWM-NATDYEFVITHPEGYELDPKFV--------------GNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILST 252 (324)
T ss_dssp HHHHH-HTSSSEEEEECCTTCCCCHHHH--------------TTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCC
T ss_pred HHHHH-HHCCCEEEEeCCcccCCChhhc--------------cceEEECCHHHHhCCCCEEEecCcccCCCccccchHHH
Confidence 99996 6899999999874321111100 012234789999999999977 32111 0
Q ss_pred hhhccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 249 TTYHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 249 ~t~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
...-.++++.++++| +++|.-+. ||.=|+.+
T Consensus 253 ~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~e 286 (324)
T 1js1_X 253 DRNWTVGDRQMAVTN-NAYFMHCLPVRRNMIVTDD 286 (324)
T ss_dssp CTTSSBCHHHHTTSS-SCEEECCSCCCBTTTBCHH
T ss_pred hcCcccCHHHHHhcC-CcEEECCCCCCCCcccCHH
Confidence 012457899999999 99998874 66666554
No 445
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.50 E-value=0.049 Score=50.60 Aligned_cols=93 Identities=16% Similarity=0.239 Sum_probs=58.8
Q ss_pred CCCEEEEE-ecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----cC
Q 020301 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (328)
Q Consensus 164 ~g~tvgIi-G~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (328)
.|++|.|+ |.|.||...++.+ +.+|++|++.+++.... ++...+ |.... .....++.+.+. ..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~--~~~~~l-------Ga~~v-i~~~~~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIA-KAYGLRVITTASRNETI--EWTKKM-------GADIV-LNHKESLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHH-HHTTCEEEEECCSHHHH--HHHHHH-------TCSEE-ECTTSCHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH--HHHHhc-------CCcEE-EECCccHHHHHHHhCCCCc
Confidence 68999999 7999999999985 79999999999876432 122222 22111 111123333332 47
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 238 DiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
|+|+-++.. +. .-...++.++++..+|.++
T Consensus 219 Dvv~d~~g~-~~----~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 219 DYVFCTFNT-DM----YYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEEEESSCH-HH----HHHHHHHHEEEEEEEEESS
T ss_pred cEEEECCCc-hH----HHHHHHHHhccCCEEEEEC
Confidence 999888762 11 1245567777777777664
No 446
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.45 E-value=0.047 Score=51.79 Aligned_cols=98 Identities=15% Similarity=0.066 Sum_probs=59.3
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCH-HHHhh------
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVLR------ 235 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell~------ 235 (328)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++.... ++. ++-|.. .-.....++ .+.+.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~a-------~~lGa~-~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGA-RLLGAACVIVGDQNPERL--KLL-------SDAGFE-TIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEEESCHHHH--HHH-------HTTTCE-EEETTSSSCHHHHHHHHHSSS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHH--HHH-------HHcCCc-EEcCCCcchHHHHHHHHhCCC
Confidence 588999999999999999984 78999 999999876532 121 222321 111111222 22222
Q ss_pred cCCEEEEcCCCChh-----hhc----cccHHHHhcCCCCcEEEEcC
Q 020301 236 EADVISLHPVLDKT-----TYH----LINKERLATMKKEAILVNCS 272 (328)
Q Consensus 236 ~aDiV~l~~plt~~-----t~~----li~~~~~~~mk~ga~lIN~a 272 (328)
..|+|+-++..... ..+ -.-...++.++++..++.++
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 58999999874310 000 01245567777777777654
No 447
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=94.44 E-value=0.074 Score=51.13 Aligned_cols=105 Identities=18% Similarity=0.266 Sum_probs=66.5
Q ss_pred cCCCEEEEEe-----cCH---HHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh
Q 020301 163 LKGQTVGVIG-----AGR---IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (328)
Q Consensus 163 l~g~tvgIiG-----~G~---IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell 234 (328)
+.|++|+|+| +|. +.++++..+ ..|||+|.+..|..-...++..+.-.+.++..|. ......++++.+
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l-~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~---~v~~~~d~~eav 261 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLM-TRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGG---NFTKTNSMAEAF 261 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHH-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSS---EEEEESCHHHHH
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcCC---EEEEEcCHHHHh
Confidence 8899999998 454 999999986 6899999999885311011111100000111121 123347899999
Q ss_pred hcCCEEEEcCCCC----------------h-------------h--hhccccHHHHhcCCC-CcEEEEc
Q 020301 235 READVISLHPVLD----------------K-------------T--TYHLINKERLATMKK-EAILVNC 271 (328)
Q Consensus 235 ~~aDiV~l~~plt----------------~-------------~--t~~li~~~~~~~mk~-ga~lIN~ 271 (328)
+.||+|..-+=.. + + ..--++++.++.+|+ +++|.-+
T Consensus 262 ~~ADVVytd~W~sm~~Q~ER~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~vt~elm~~ak~~dai~MHc 330 (418)
T 2yfk_A 262 KDADVVYPKSWAPFAAMEKRTELYGNGDQAGIDQLEQELLSQNKKHKDWECTEELMKTTKDGKALYMHC 330 (418)
T ss_dssp TTCSEEEECCCCCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHGGGTTCCBCHHHHHTSGGGCCEECCC
T ss_pred cCCCEEEEccccchhHHHHHhhhhccccchhhhhhhhhhhhHHHHHhhcCCCHHHHHhcCCCCeEEECC
Confidence 9999998743100 0 0 112468999999986 8888866
No 448
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=94.42 E-value=0.056 Score=50.49 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=24.9
Q ss_pred EEEEEecCHHHHHHHHHHHhcCCcEEEEEcC
Q 020301 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDL 197 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~ 197 (328)
+|||+|+|+||+.+.|.|... .++|.+.+.
T Consensus 2 kVgInG~G~IGr~vlr~l~~~-~~evvaind 31 (331)
T 2g82_O 2 KVGINGFGRIGRQVFRILHSR-GVEVALIND 31 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCEEEEEec
Confidence 799999999999999987545 888886543
No 449
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.41 E-value=0.37 Score=47.05 Aligned_cols=113 Identities=14% Similarity=0.111 Sum_probs=71.0
Q ss_pred ccCCCEEEEEecC----------HHHHHHHHHHHhcCCcEEEEEcCCchhHH--HHHHhhhhhhhhcCCCCCccccccCC
Q 020301 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRL--EKFVTAYGQFLKANGEQPVTWKRASS 229 (328)
Q Consensus 162 ~l~g~tvgIiG~G----------~IG~~vA~~l~~~fg~~V~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (328)
.+.|++|+|+|+- +-...+++.| ...|++|.+|||...... ++....|+... . ........+
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~ 405 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHL-MEEHAKLSVYDPKVQKSQMLNDLASVTSAQD-V----ERLITVESD 405 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHHHHHHHHHHSCHHH-H----HHHEEEESS
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHH-HHCCCEEEEECCCCCchhhHHHHHhhhcccc-c----cCceeecCC
Confidence 4789999999973 5667899987 688999999999864321 11111010000 0 000112357
Q ss_pred HHHHhhcCCEEEEcCCCChhhhccccHHH-HhcCCCCcEEEEcCCCcccCHHHHHH
Q 020301 230 MDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSRGPVIDEVALVE 284 (328)
Q Consensus 230 l~ell~~aDiV~l~~plt~~t~~li~~~~-~~~mk~ga~lIN~aRG~~vde~aL~~ 284 (328)
+++.++.||.|+++..- ++.+. ++-+. .+.|+...+++++ |+ ++|.+.+.+
T Consensus 406 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~~ 457 (481)
T 2o3j_A 406 PYAAARGAHAIVVLTEW-DEFVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKALRE 457 (481)
T ss_dssp HHHHHTTCSEEEECSCC-GGGTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHHHH
T ss_pred HHHHHcCCCEEEEcCCc-HHhhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHHHh
Confidence 78899999999999873 44444 45444 4567776688887 54 567665443
No 450
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=94.39 E-value=0.12 Score=50.16 Aligned_cols=118 Identities=17% Similarity=0.139 Sum_probs=63.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCCchhHHHHHHhh-hhh-hhhcC--C---C----CCccccccCCHHHH
Q 020301 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTA-YGQ-FLKAN--G---E----QPVTWKRASSMDEV 233 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~~~~~~~~~~~~-~~~-~~~~~--~---~----~~~~~~~~~~l~el 233 (328)
-++||||+|.||+.+++.+.+.-+++|. ++|+++... ++..+. |+. |.... . . .......+.+++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era-~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNT-FKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHH-HHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHH-HHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 3799999999999999886444478755 567776432 222111 120 00000 0 0 00011235799999
Q ss_pred hh--cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEE--EcCCCcccCHHHHHHHHHcC
Q 020301 234 LR--EADVISLHPVLDKTTYHLINKERLATMKKEAILV--NCSRGPVIDEVALVEHLKQN 289 (328)
Q Consensus 234 l~--~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lI--N~aRG~~vde~aL~~aL~~g 289 (328)
++ ..|+|+++.|. ++... +-.+..|+.|.-++ |.+- ...+-+.|.++-++.
T Consensus 103 L~d~dIDaVviaTp~-p~~H~---e~a~~AL~AGKHVv~~nk~l-~~~eg~eL~~~A~e~ 157 (446)
T 3upl_A 103 LSNPLIDVIIDATGI-PEVGA---ETGIAAIRNGKHLVMMNVEA-DVTIGPYLKAQADKQ 157 (446)
T ss_dssp HTCTTCCEEEECSCC-HHHHH---HHHHHHHHTTCEEEECCHHH-HHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEcCCC-hHHHH---HHHHHHHHcCCcEEecCccc-CHHHHHHHHHHHHHh
Confidence 98 48999999984 33222 22333444555555 4310 112234666655553
No 451
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.38 E-value=0.085 Score=48.59 Aligned_cols=79 Identities=20% Similarity=0.161 Sum_probs=47.3
Q ss_pred cCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchh--HHHHHHhhhhhhhhcCCCCCcc--ccccCCHHHHhh--
Q 020301 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPVT--WKRASSMDEVLR-- 235 (328)
Q Consensus 163 l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ell~-- 235 (328)
+..++|.|.|. |.||+.+++.|+ .-|.+|++.+|.... ........ ....+..... .....++.++++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~----l~~~~v~~~~~Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASL-DAHRPTYILARPGPRSPSKAKIFKA----LEDKGAIIVYGLINEQEAMEKILKEH 82 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHH-HTTCCEEEEECSSCCCHHHHHHHHH----HHHTTCEEEECCTTCHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHH-HCCCCEEEEECCCCCChhHHHHHHH----HHhCCcEEEEeecCCHHHHHHHHhhC
Confidence 44678999998 999999999974 668999999987621 11111111 1111211111 111235677888
Q ss_pred cCCEEEEcCCC
Q 020301 236 EADVISLHPVL 246 (328)
Q Consensus 236 ~aDiV~l~~pl 246 (328)
++|+|+.+...
T Consensus 83 ~~d~Vi~~a~~ 93 (346)
T 3i6i_A 83 EIDIVVSTVGG 93 (346)
T ss_dssp TCCEEEECCCG
T ss_pred CCCEEEECCch
Confidence 89998877763
No 452
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.35 E-value=0.055 Score=50.78 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=58.6
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCch------------------hHHHHHHhhhhhhhhcCC-CC
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANG-EQ 220 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~-~~ 220 (328)
..|.+++|.|||+|.+|.++|+.|+ ..|. ++..+|...- .+.+...+ .+.+-. ..
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La-~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~----~l~~lnp~v 106 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLI-LAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLE----RAQNLNPMV 106 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHH----HHHHTCTTS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHH----HHHhHCCCe
Confidence 4689999999999999999999985 5576 7888876421 01111101 111100 00
Q ss_pred Cccccc---cCCHHHHhhcCCEEEEcCCCChhhhccccHHHHhc
Q 020301 221 PVTWKR---ASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (328)
Q Consensus 221 ~~~~~~---~~~l~ell~~aDiV~l~~plt~~t~~li~~~~~~~ 261 (328)
...... ....+++++++|+|+.+. .+.+++..+|+...+.
T Consensus 107 ~v~~~~~~~~~~~~~~~~~~dvVv~~~-d~~~~r~~ln~~~~~~ 149 (346)
T 1y8q_A 107 DVKVDTEDIEKKPESFFTQFDAVCLTC-CSRDVIVKVDQICHKN 149 (346)
T ss_dssp EEEEECSCGGGCCHHHHTTCSEEEEES-CCHHHHHHHHHHHHHT
T ss_pred EEEEEecccCcchHHHhcCCCEEEEcC-CCHHHHHHHHHHHHHc
Confidence 000000 012468899999998875 4778888888776653
No 453
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.33 E-value=0.16 Score=45.36 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=32.6
Q ss_pred cccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCC
Q 020301 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (328)
Q Consensus 161 ~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~ 198 (328)
..+.||++.|.|. |-||+++|+.|+ .-|++|++.|++
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~ 43 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLA-EEGADIILFDIC 43 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHH-HCCCeEEEEccc
Confidence 3689999999997 579999999985 779999999886
No 454
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=94.21 E-value=0.046 Score=48.77 Aligned_cols=39 Identities=23% Similarity=0.258 Sum_probs=33.8
Q ss_pred ccCCCEEEEEe---cCHHHHHHHHHHHhcCCcEEEEEcCCchh
Q 020301 162 LLKGQTVGVIG---AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (328)
Q Consensus 162 ~l~g~tvgIiG---~G~IG~~vA~~l~~~fg~~V~~~d~~~~~ 201 (328)
.+.||++.|.| -|-||+++|+.|+ ..|++|+..+++...
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~-~~G~~V~~~~r~~~~ 45 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQ-EQGAQLVLTGFDRLR 45 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEECSCHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHH-HCCCEEEEEecChHH
Confidence 47899999999 4899999999985 779999999987654
No 455
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.20 E-value=0.071 Score=49.28 Aligned_cols=88 Identities=10% Similarity=0.130 Sum_probs=54.8
Q ss_pred CCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC---HHHH-hhcCCEE
Q 020301 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (328)
Q Consensus 165 g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV 240 (328)
.+++.|+|+|++|+.+|+.| ...|. |++.|++++.. + . ++.+.... .....+ |+++ +++||.|
T Consensus 115 ~~~viI~G~G~~g~~l~~~L-~~~g~-v~vid~~~~~~-~-~--------~~~~~~~i-~gd~~~~~~L~~a~i~~a~~v 181 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRK-K-V--------LRSGANFV-HGDPTRVSDLEKANVRGARAV 181 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTG-GGSCE-EEEESCGGGHH-H-H--------HHTTCEEE-ESCTTSHHHHHHTCSTTEEEE
T ss_pred cCCEEEECCcHHHHHHHHHH-HhCCc-EEEEeCChhhh-h-H--------HhCCcEEE-EeCCCCHHHHHhcChhhccEE
Confidence 56899999999999999997 67888 99999887532 1 1 11121111 111122 3444 7789999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCcE
Q 020301 241 SLHPVLDKTTYHLINKERLATMKKEAI 267 (328)
Q Consensus 241 ~l~~plt~~t~~li~~~~~~~mk~ga~ 267 (328)
+++.+.. ..++.-....+.+.+...
T Consensus 182 i~~~~~d--~~n~~~~~~ar~~~~~~~ 206 (336)
T 1lnq_A 182 IVDLESD--SETIHCILGIRKIDESVR 206 (336)
T ss_dssp EECCSSH--HHHHHHHHHHHTTCTTSE
T ss_pred EEcCCcc--HHHHHHHHHHHHHCCCCe
Confidence 9998743 334444455566666533
No 456
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.12 E-value=0.08 Score=49.35 Aligned_cols=94 Identities=10% Similarity=-0.020 Sum_probs=60.7
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHH-HHh-----hc
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD-EVL-----RE 236 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-ell-----~~ 236 (328)
.|+++.|+| .|.||..+++.+ +..|++|++.+++.... + ....+ |..........++. ++. ..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~Vi~~~~~~~~~-~-~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLT-RMAGAIPLVTAGSQKKL-Q-MAEKL-------GAAAGFNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESCHHHH-H-HHHHH-------TCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHcCCEEEEEeCCHHHH-H-HHHHc-------CCcEEEecCChHHHHHHHHHhcCCC
Confidence 588999999 799999999986 78999999999876432 1 11222 21111011112222 222 14
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+++.+... + .-...++.|+++..++.++-
T Consensus 232 ~d~vi~~~G~-~-----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 232 VNLILDCIGG-S-----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEEEESSCG-G-----GHHHHHHHEEEEEEEEECCC
T ss_pred ceEEEECCCc-h-----HHHHHHHhccCCCEEEEEec
Confidence 7999988762 1 12456788999999998864
No 457
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=94.07 E-value=0.087 Score=49.30 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=54.2
Q ss_pred CEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCc---hhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEE
Q 020301 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ---ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (328)
.+++|+| .|.+|+++.++|...=++++.....+. .. -....+.|. +.+ +..........+.+++++++|+|+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~sa-Gk~~~~~~p-~~~--~~~~~~v~~~~~~~~~~~~~Dvvf 80 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDA-GKLISDLHP-QLK--GIVELPLQPMSDISEFSPGVDVVF 80 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTT-TSBHHHHCG-GGT--TTCCCBEEEESSGGGTCTTCSEEE
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhc-CCchHHhCc-ccc--CccceeEeccCCHHHHhcCCCEEE
Confidence 4799999 699999999997543466776654332 11 000111111 011 111111111004455558999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCcEEEEcCCC
Q 020301 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (328)
Q Consensus 242 l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG 274 (328)
+|+|.. .++.+. ... .+.|+.+|+.|--
T Consensus 81 ~a~p~~-~s~~~~-~~~---~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 81 LATAHE-VSHDLA-PQF---LEAGCVVFDLSGA 108 (337)
T ss_dssp ECSCHH-HHHHHH-HHH---HHTTCEEEECSST
T ss_pred ECCChH-HHHHHH-HHH---HHCCCEEEEcCCc
Confidence 999921 122211 222 3579999999754
No 458
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.01 E-value=0.075 Score=48.96 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=58.2
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHH----HHh--hc
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD----EVL--RE 236 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----ell--~~ 236 (328)
.|+++.|+|. |.||+.+++.+ +..|++|++.+++.... + ....+ +..........++. ++. ..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~Vi~~~~~~~~~-~-~~~~~-------g~~~~~d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWA-RHLGATVIGTVSTEEKA-E-TARKL-------GCHHTINYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHH-HHTTCEEEEEESSHHHH-H-HHHHH-------TCSEEEETTTSCHHHHHHHHHTTCC
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHCCCEEEEEeCCHHHH-H-HHHHc-------CCCEEEECCCHHHHHHHHHHhCCCC
Confidence 4789999995 99999999986 78999999999876432 1 11112 21111000112222 222 24
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.|+++.+... + .-+..++.++++..+|.++
T Consensus 215 ~d~vi~~~g~--~----~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 215 VDVVYDSIGK--D----TLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEEECSCT--T----THHHHHHTEEEEEEEEECC
T ss_pred CeEEEECCcH--H----HHHHHHHhhccCCEEEEEe
Confidence 7999988763 1 2356677778877777765
No 459
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=94.00 E-value=0.14 Score=46.04 Aligned_cols=38 Identities=18% Similarity=0.181 Sum_probs=33.2
Q ss_pred ccCCCEEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 162 ~l~g~tvgIiG~---G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
.+.||++.|.|. |-||+++|+.|+ .-|++|++.+++..
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFH-REGAQLAFTYATPK 58 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHH-HcCCEEEEEeCCHH
Confidence 488999999998 589999999985 67999999998763
No 460
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.97 E-value=0.15 Score=49.96 Aligned_cols=115 Identities=17% Similarity=0.231 Sum_probs=67.0
Q ss_pred EEEEEecCHHHHHH--HHHHH--hcC---CcEEEEEcCCchhHHHH--HHhhhhhhhhcCCCCCccccccCCHHHHhhcC
Q 020301 167 TVGVIGAGRIGSAY--ARMMV--EGF---KMNLIYYDLYQATRLEK--FVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (328)
Q Consensus 167 tvgIiG~G~IG~~v--A~~l~--~~f---g~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (328)
+|+|||.|++|... ..-++ ..+ +.+|..+|......... ....+ ....+ .+......++.++.++.|
T Consensus 2 KI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~---~~~~~-~~~~i~~t~d~~eAl~gA 77 (477)
T 3u95_A 2 KISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKY---VEELN-SPVKVVKTESLDEAIEGA 77 (477)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHH---HHHHT-CCCEEEEESCHHHHHTTC
T ss_pred EEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHH---HHHcC-CCeEEEEeCCHHHHhCCC
Confidence 69999999998552 11112 123 45899999986432111 11111 11112 122333457899999999
Q ss_pred CEEEEcCCC---------------------Ch-hhhcccc-------------------------HHHHhcCCCCcEEEE
Q 020301 238 DVISLHPVL---------------------DK-TTYHLIN-------------------------KERLATMKKEAILVN 270 (328)
Q Consensus 238 DiV~l~~pl---------------------t~-~t~~li~-------------------------~~~~~~mk~ga~lIN 270 (328)
|||+++.-. .+ .+++++. .+.++...|+|++||
T Consensus 78 D~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P~A~~in 157 (477)
T 3u95_A 78 DFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAPKAYLMQ 157 (477)
T ss_dssp SEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence 999998621 00 0111111 123334459999999
Q ss_pred cCCCcccCHHHHHHH
Q 020301 271 CSRGPVIDEVALVEH 285 (328)
Q Consensus 271 ~aRG~~vde~aL~~a 285 (328)
.+-.--+-..++.+.
T Consensus 158 ~tNP~~i~t~a~~~~ 172 (477)
T 3u95_A 158 TANPVFEITQAVRRW 172 (477)
T ss_dssp CSSCHHHHHHHHHHH
T ss_pred ecChHHHHHHHHHHh
Confidence 998877777788765
No 461
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=93.90 E-value=0.061 Score=49.01 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=31.2
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
.|+++.|.|. |-||+.+++.|+ .-|.+|++.+|+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~-~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLL-EKGYEVYGADRRSG 38 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEECCCc
Confidence 5789999997 999999999984 67999999998764
No 462
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.89 E-value=0.27 Score=46.18 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=59.1
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
+-.+||||| .|.+|+++.++|..-=..++.........- ..+.+.|. +.+ ....... .+.++++.++|++++
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG-~~~~~~~p-~~~----~~l~~~~-~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAG-KKLEEIFP-STL----ENSILSE-FDPEKVSKNCDVLFT 84 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTT-SBHHHHCG-GGC----CCCBCBC-CCHHHHHHHCSEEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCccccc-CChHHhCh-hhc----cCceEEe-CCHHHhhcCCCEEEE
Confidence 345799997 699999999998533346766654322110 11111121 111 1111211 356676689999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccC
Q 020301 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (328)
Q Consensus 243 ~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vd 278 (328)
|+|.. ..++....+ .|+.+|+.|.--=.+
T Consensus 85 alp~~------~s~~~~~~~-~g~~VIDlSsdfRl~ 113 (351)
T 1vkn_A 85 ALPAG------ASYDLVREL-KGVKIIDLGADFRFD 113 (351)
T ss_dssp CCSTT------HHHHHHTTC-CSCEEEESSSTTTCS
T ss_pred CCCcH------HHHHHHHHh-CCCEEEECChhhhCC
Confidence 99943 234445555 799999998543333
No 463
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=93.89 E-value=0.53 Score=44.93 Aligned_cols=106 Identities=20% Similarity=0.321 Sum_probs=65.2
Q ss_pred ccCCCEEEEEec-----C---HHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHH
Q 020301 162 LLKGQTVGVIGA-----G---RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (328)
Q Consensus 162 ~l~g~tvgIiG~-----G---~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el 233 (328)
.|.|++|+|+|- | ++..+.+..+ ..||++|.+..|..-...++..+...+.++..|. ......++++.
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~-~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~---~i~~~~d~~ea 263 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLM-TRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGG---SFRQVTSMEEA 263 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHH-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTC---EEEEESCHHHH
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCC---EEEEEcCHHHH
Confidence 488999999983 5 7889999886 6899999999875211111111100000111121 12234799999
Q ss_pred hhcCCEEEEcC--CCCh-------------------h----------hhccccHHHHhcCC-CCcEEEEc
Q 020301 234 LREADVISLHP--VLDK-------------------T----------TYHLINKERLATMK-KEAILVNC 271 (328)
Q Consensus 234 l~~aDiV~l~~--plt~-------------------~----------t~~li~~~~~~~mk-~ga~lIN~ 271 (328)
++.||+|..-+ +... + ...-+|.+.++.++ ++++|.=+
T Consensus 264 v~~aDvVytd~W~Smg~~~er~~~~~~~~~~~~~~~e~~~~~r~~~~~~yqVn~elm~~a~~~daifMHc 333 (399)
T 3q98_A 264 FKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHC 333 (399)
T ss_dssp HTTCSEEEECCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTTCCBCHHHHHTSGGGCCEECCC
T ss_pred hCCCCEEEecCccccchhhhhhhhccccchhhhhhhhhhhhHHHHHccCcEECHHHHhhcCCCCcEEECC
Confidence 99999997643 1000 0 01337899999887 47888755
No 464
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.86 E-value=0.085 Score=49.08 Aligned_cols=92 Identities=17% Similarity=0.159 Sum_probs=58.0
Q ss_pred CEEEEEec-CHHHHHHHHHHHhcCCc-EEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----cCC
Q 020301 166 QTVGVIGA-GRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EAD 238 (328)
Q Consensus 166 ~tvgIiG~-G~IG~~vA~~l~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~aD 238 (328)
+++.|.|. |.||+.+++.+ +..|+ +|++.+++.... +...+.+ |..........++.+.+. ..|
T Consensus 162 ~~vlI~GasggiG~~~~~~a-~~~Ga~~Vi~~~~~~~~~-~~~~~~~-------g~~~~~d~~~~~~~~~~~~~~~~~~d 232 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIG-HFLGCSRVVGICGTHEKC-ILLTSEL-------GFDAAINYKKDNVAEQLRESCPAGVD 232 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHH-HHTTCSEEEEEESCHHHH-HHHHHTS-------CCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred cEEEEECCCcHHHHHHHHHH-HHCCCCeEEEEeCCHHHH-HHHHHHc-------CCceEEecCchHHHHHHHHhcCCCCC
Confidence 89999998 99999999985 78999 999999875432 1111111 221111111123333332 479
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 239 iV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
+++.+... + .-...++.++++..+|.++
T Consensus 233 ~vi~~~G~--~----~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 233 VYFDNVGG--N----ISDTVISQMNENSHIILCG 260 (357)
T ss_dssp EEEESCCH--H----HHHHHHHTEEEEEEEEECC
T ss_pred EEEECCCH--H----HHHHHHHHhccCcEEEEEC
Confidence 99888761 1 2356677788888888765
No 465
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.83 E-value=0.067 Score=49.95 Aligned_cols=101 Identities=13% Similarity=0.142 Sum_probs=57.0
Q ss_pred EEEEEecCHHHHHHHHHHHhcC---------CcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhc
Q 020301 167 TVGVIGAGRIGSAYARMMVEGF---------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (328)
Q Consensus 167 tvgIiG~G~IG~~vA~~l~~~f---------g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (328)
++||||+|.||+.+++.+. .. +++|. ++|++.... .+. +. ...+.++++++ .
T Consensus 5 rvgIiG~G~VG~~~~~~l~-~~~~~l~~~g~~~~lvaV~d~~~~~~--------------~~~-~~-~~~~~d~~~ll-~ 66 (332)
T 2ejw_A 5 KIALLGGGTVGSAFYNLVL-ERAEELSAFGVVPRFLGVLVRDPRKP--------------RAI-PQ-ELLRAEPFDLL-E 66 (332)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTGGGGGGGTEEEEEEEEECSCTTSC--------------CSS-CG-GGEESSCCCCT-T
T ss_pred EEEEEcCCHHHHHHHHHHH-hChhhHhhcCCCEEEEEEEECCHHHh--------------hcc-Cc-ccccCCHHHHh-C
Confidence 6999999999999999863 33 46664 556654220 011 11 11245788888 9
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQN 289 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~-vde~aL~~aL~~g 289 (328)
.|+|+.|.|....... + ..+.++.|.-+|...-..+ -.-+.|.++-++.
T Consensus 67 iDvVve~t~~~~~a~~-~---~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 67 ADLVVEAMGGVEAPLR-L---VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp CSEEEECCCCSHHHHH-H---HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred CCEEEECCCCcHHHHH-H---HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 9999999884421111 1 1223344444444221222 2445666665554
No 466
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=93.80 E-value=0.061 Score=51.29 Aligned_cols=41 Identities=22% Similarity=0.516 Sum_probs=33.0
Q ss_pred ccccccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 158 FVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 158 ~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
+.+..+.+++|+|+|-|..|+.+++.+ +.+|.+|+++| +..
T Consensus 17 ~~~~mm~~~~I~ilGgG~lg~~l~~aa-~~lG~~v~~~d-~~~ 57 (403)
T 3k5i_A 17 FQGHMWNSRKVGVLGGGQLGRMLVESA-NRLNIQVNVLD-ADN 57 (403)
T ss_dssp ----CCSCCEEEEECCSHHHHHHHHHH-HHHTCEEEEEE-STT
T ss_pred EeccCCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEE-CCC
Confidence 345557799999999999999999995 78999999999 643
No 467
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.79 E-value=0.26 Score=46.11 Aligned_cols=94 Identities=14% Similarity=0.007 Sum_probs=58.3
Q ss_pred cCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----c
Q 020301 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (328)
Q Consensus 163 l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~ 236 (328)
-.|.+|.|+|. |.+|...++.+ +.+|++|++.. +..+ .++...+ |....-.....++.+.+. .
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla-~~~Ga~Vi~~~-~~~~--~~~~~~l-------Ga~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQML-RLSGYIPIATC-SPHN--FDLAKSR-------GAEEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHH-HHTTCEEEEEE-CGGG--HHHHHHT-------TCSEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHH-HHCCCEEEEEe-CHHH--HHHHHHc-------CCcEEEECCCchHHHHHHHHccCC
Confidence 46899999999 89999999985 89999998875 3322 1222222 322111111234433332 3
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcC-CCCcEEEEcC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~m-k~ga~lIN~a 272 (328)
.|+++-++.. +++ -...++.+ +++..++.++
T Consensus 232 ~d~v~d~~g~-~~~----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCITN-VES----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESSCS-HHH----HHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECCCc-hHH----HHHHHHHhhcCCCEEEEEe
Confidence 8999988773 222 23456667 5788888776
No 468
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=93.75 E-value=0.045 Score=48.44 Aligned_cols=37 Identities=19% Similarity=0.076 Sum_probs=31.9
Q ss_pred cccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCC
Q 020301 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (328)
Q Consensus 161 ~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~ 198 (328)
..+.|+++.|.|. |.||+.+|+.|+ .-|++|++.++.
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~-~~G~~v~~~~r~ 54 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELG-RRGASVVVNYGS 54 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCC
Confidence 3588999999985 799999999985 679999999884
No 469
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.75 E-value=0.11 Score=48.29 Aligned_cols=94 Identities=16% Similarity=0.223 Sum_probs=59.4
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHH-H---hh--c
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-V---LR--E 236 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-l---l~--~ 236 (328)
.|+++.|.|. |.||..+++.+ +..|++|++.+++..... ....+ |..........++.+ + .. .
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~~~-------ga~~~~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIA-RAYGLKILGTAGTEEGQK--IVLQN-------GAHEVFNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHHHH--HHHHT-------TCSEEEETTSTTHHHHHHHHHCTTC
T ss_pred CcCEEEEECCCChHHHHHHHHH-HHCCCEEEEEeCChhHHH--HHHHc-------CCCEEEeCCCchHHHHHHHHcCCCC
Confidence 4889999998 99999999985 789999999998764321 11111 221111111122222 2 22 5
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
.|+|+.+... .+ + ...++.++++..++.++.
T Consensus 240 ~D~vi~~~G~--~~---~-~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 240 IDIIIEMLAN--VN---L-SKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp EEEEEESCHH--HH---H-HHHHHHEEEEEEEEECCC
T ss_pred cEEEEECCCh--HH---H-HHHHHhccCCCEEEEEec
Confidence 7999888652 11 2 456788888888887763
No 470
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=93.73 E-value=0.052 Score=48.19 Aligned_cols=39 Identities=18% Similarity=0.110 Sum_probs=33.4
Q ss_pred cccCCCEEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 161 NLLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 161 ~~l~g~tvgIiG~---G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
..+.||++.|.|. |-||+++|+.|+ .-|++|++.+++..
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~ 45 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLK-EAGAEVALSYQAER 45 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHH-HHTCEEEEEESCGG
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHH
Confidence 3578999999998 589999999985 56999999998763
No 471
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.68 E-value=0.13 Score=49.87 Aligned_cols=107 Identities=13% Similarity=0.160 Sum_probs=61.4
Q ss_pred CEEEEEecCHHHHHHHHHHHh---------cCCcEEE-EEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh
Q 020301 166 QTVGVIGAGRIGSAYARMMVE---------GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~---------~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (328)
-++||||+|.||+.+++.+.+ +.+.+|. ++|++.... .... .+ ...+.++++++.
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~-~~~~---------~~-----~~~~~d~~ell~ 75 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKA-EALA---------GG-----LPLTTNPFDVVD 75 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHH-HHHH---------TT-----CCEESCTHHHHT
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHh-hhhc---------cc-----CcccCCHHHHhc
Confidence 479999999999999876531 3567765 456665321 1110 01 123468999997
Q ss_pred --cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCCc
Q 020301 236 --EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNPM 291 (328)
Q Consensus 236 --~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~v-de~aL~~aL~~g~i 291 (328)
+.|+|+.++|.+.....+ ....++.|.-++..-=+... +-+.|.++.++...
T Consensus 76 d~diDvVve~tp~~~~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv 130 (444)
T 3mtj_A 76 DPEIDIVVELIGGLEPAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGV 130 (444)
T ss_dssp CTTCCEEEECCCSSTTHHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEcCCCchHHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCC
Confidence 479999999853221221 23444555555543222222 23567776665433
No 472
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.64 E-value=0.13 Score=47.77 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=59.2
Q ss_pred CCCEEEEEecC-HHHHHHHHHHHhcC-CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCC----HHHHh--h
Q 020301 164 KGQTVGVIGAG-RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS----MDEVL--R 235 (328)
Q Consensus 164 ~g~tvgIiG~G-~IG~~vA~~l~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~ell--~ 235 (328)
.|+++.|+|.| .||..+++.+ +.. |++|++.+++.... +....+ |..........+ +.++. .
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a-~~~~Ga~Vi~~~~~~~~~--~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIA-KAVSGATIIGVDVREEAV--EAAKRA-------GADYVINASMQDPLAEIRRITESK 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHHTCCEEEEEESSHHHH--HHHHHH-------TCSEEEETTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCCccHHHHHHHHH-HHcCCCeEEEEcCCHHHH--HHHHHh-------CCCEEecCCCccHHHHHHHHhcCC
Confidence 47899999999 9999999986 677 99999999876432 111122 211110001112 23333 3
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
..|+|+.+... +.+ -+..++.++++..++.++.
T Consensus 240 ~~d~vi~~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 240 GVDAVIDLNNS-EKT----LSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp CEEEEEESCCC-HHH----HTTGGGGEEEEEEEEECCS
T ss_pred CceEEEECCCC-HHH----HHHHHHHHhcCCEEEEECC
Confidence 57999888763 211 1344567788888888764
No 473
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=93.63 E-value=0.065 Score=47.57 Aligned_cols=37 Identities=22% Similarity=0.193 Sum_probs=32.4
Q ss_pred ccCCCEEEEEec---CHHHHHHHHHHHhcCCcEEEEEcCCc
Q 020301 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (328)
Q Consensus 162 ~l~g~tvgIiG~---G~IG~~vA~~l~~~fg~~V~~~d~~~ 199 (328)
.+.||++.|.|. |-||+++|+.|+ .-|++|+..+|+.
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAMH-REGAELAFTYQND 45 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESST
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEEcCcH
Confidence 378999999997 589999999985 6799999999875
No 474
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=93.62 E-value=2.9 Score=39.15 Aligned_cols=149 Identities=13% Similarity=0.164 Sum_probs=84.9
Q ss_pred HHHhCCceEecCCCCCCchHHHHHHHHHHHHHhcHHHHHHHHHcCCCCCCCCCcccccccCCCEEEEEec-------CHH
Q 020301 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA-------GRI 176 (328)
Q Consensus 104 ~~~~~gI~v~n~p~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~g~w~~w~~~~~~~~~l~g~tvgIiG~-------G~I 176 (328)
.++-..|+|.|. |....+. .+++=++.+.+++ | ..++.|++++++|. .++
T Consensus 152 ~a~~~~vPVIN~-g~~~HPt--QaL~Dl~Ti~e~~---------G-----------~~dl~g~kv~~~~~~~gd~~~~~V 208 (359)
T 3kzn_A 152 FAKYSPVPVINM-ETITHPC--QELAHALALQEHF---------G-----------TPDLRGKKYVLTWTYHPKPLNTAV 208 (359)
T ss_dssp HHHHCSSCEEES-SSSCCHH--HHHHHHHHHHHHH---------T-----------SSCCTTCEEEEEECCCSSCCCSHH
T ss_pred HHHhCCCcccCc-ccccCch--HHHHHHHHHHHHc---------C-----------CccccCCeEEEEEeecCCccccch
Confidence 345568999995 5443332 2333333333322 1 13688999999986 368
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCchhH-HHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcCCCCh-------
Q 020301 177 GSAYARMMVEGFKMNLIYYDLYQATR-LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK------- 248 (328)
Q Consensus 177 G~~vA~~l~~~fg~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~plt~------- 248 (328)
.++....+ ..||++|.+.-|.+.-. .++..+.....+...| .......++++.++.||+|..-.=-..
T Consensus 209 a~S~~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g---~~i~~~~d~~eav~~aDvvyt~r~q~~r~~~~~~ 284 (359)
T 3kzn_A 209 ANSALTIA-TRMGMDVTLLCPTPDYILDERYMDWAAQNVAESG---GSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWE 284 (359)
T ss_dssp HHHHHHHH-HHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHS---CEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCT
T ss_pred hhhhHHHH-HhccccEEEEecccccCCCHHHHHHHHHHHHhhC---CCcccccCHHHHhcCCeEEEEEEEEEeecccchh
Confidence 88888886 68999999998853211 1111111001111112 122335689999999999975432211
Q ss_pred -h--h-----hccccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 020301 249 -T--T-----YHLINKERLATMKKEAILVNCS---RGPVIDEV 280 (328)
Q Consensus 249 -~--t-----~~li~~~~~~~mk~ga~lIN~a---RG~~vde~ 280 (328)
+ . ...++++.++ ++++++|.-+. ||.=|+.+
T Consensus 285 ~~~~~~~~~~~y~v~~~l~~-~~~~ai~MHplP~~Rg~EI~~e 326 (359)
T 3kzn_A 285 PEKPIRDQYQHFIVDERKMA-LTNNGVFSHCLPLRRNVKATDA 326 (359)
T ss_dssp THHHHHGGGGGGSBCHHHHH-TSSSCEEECCSCCCBTTTBCHH
T ss_pred hhHHHHHHHhccChHHHHhc-CCCCCEEECCCCCCCCCCcCHH
Confidence 0 0 1135666665 56788887664 77655544
No 475
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=93.52 E-value=0.11 Score=46.06 Aligned_cols=37 Identities=24% Similarity=0.202 Sum_probs=30.8
Q ss_pred ccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEE-cCCc
Q 020301 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYY-DLYQ 199 (328)
Q Consensus 162 ~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~-d~~~ 199 (328)
++.||++.|.|. |-||+++|+.|+ .-|++|++. ++..
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~ 43 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNGAA 43 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSSC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCH
Confidence 588999999996 579999999985 679999988 4443
No 476
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.51 E-value=0.056 Score=48.31 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=45.5
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCc--cccccCCHHHHhhc-CCEE
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLRE-ADVI 240 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~-aDiV 240 (328)
.+++|.|.|.|.||+.+++.|+ .-|.+|++.+|+..... .+.... ......+++++++. +|+|
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~~d~v 67 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLT-AQGHEVTGLRRSAQPMP-------------AGVQTLIADVTRPDTLASIVHLRPEIL 67 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHH-HTTCCEEEEECTTSCCC-------------TTCCEEECCTTCGGGCTTGGGGCCSEE
T ss_pred CCCcEEEECCCHHHHHHHHHHH-HCCCEEEEEeCCccccc-------------cCCceEEccCCChHHHHHhhcCCCCEE
Confidence 4678999999999999999984 67999999998754310 011100 01112345566776 9999
Q ss_pred EEcCC
Q 020301 241 SLHPV 245 (328)
Q Consensus 241 ~l~~p 245 (328)
+.+..
T Consensus 68 ih~a~ 72 (286)
T 3gpi_A 68 VYCVA 72 (286)
T ss_dssp EECHH
T ss_pred EEeCC
Confidence 87754
No 477
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.51 E-value=0.15 Score=47.00 Aligned_cols=38 Identities=24% Similarity=0.326 Sum_probs=32.4
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcCCcEEEEEcCCchh
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~d~~~~~ 201 (328)
.|.++.|+|.|.+|...++.+++..|.+|++.+++..+
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r 200 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDK 200 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHH
Confidence 47899999999999999988644678999999988654
No 478
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=93.48 E-value=0.13 Score=47.75 Aligned_cols=103 Identities=22% Similarity=0.266 Sum_probs=60.7
Q ss_pred CCEEEEEe-cCHHHHHHHHHHHhcCC--cEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc---cCCHHHHhhcCC
Q 020301 165 GQTVGVIG-AGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREAD 238 (328)
Q Consensus 165 g~tvgIiG-~G~IG~~vA~~l~~~fg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ell~~aD 238 (328)
..+|+|+| .|.+|..++..|+ ..| -+|..+|+..... ..... .+ ...+..... ..++++.++.||
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~-~~g~~~ev~l~Di~~~~~---~~~dL----~~-~~~~~~v~~~~~t~d~~~al~gaD 78 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMK-MNPLVSVLHLYDVVNAPG---VTADI----SH-MDTGAVVRGFLGQQQLEAALTGMD 78 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHH-HCTTEEEEEEEESSSHHH---HHHHH----HT-SCSSCEEEEEESHHHHHHHHTTCS
T ss_pred CCEEEEECCCChHHHHHHHHHH-hCCCCCEEEEEeCCCcHh---HHHHh----hc-ccccceEEEEeCCCCHHHHcCCCC
Confidence 35899999 8999999999874 456 6899999765411 11001 11 111111111 135678899999
Q ss_pred EEEEcCCCChhhhcc-------cc----HHH---HhcCCCCcEEEEcCCCcccCH
Q 020301 239 VISLHPVLDKTTYHL-------IN----KER---LATMKKEAILVNCSRGPVIDE 279 (328)
Q Consensus 239 iV~l~~plt~~t~~l-------i~----~~~---~~~mk~ga~lIN~aRG~~vde 279 (328)
+|+++.+... ..+. .| ++. +....|.+++++.+ ..+|.
T Consensus 79 vVi~~ag~~~-~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 79 LIIVPAGVPR-KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNS 130 (326)
T ss_dssp EEEECCCCCC-CSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHH
T ss_pred EEEEcCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHH
Confidence 9999986332 1111 11 111 22234788999974 45665
No 479
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.46 E-value=0.23 Score=45.70 Aligned_cols=95 Identities=16% Similarity=0.105 Sum_probs=58.7
Q ss_pred cCCCEEEEEecCHHHHHHHHHHHhcCCcE-EEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHh------h
Q 020301 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------R 235 (328)
Q Consensus 163 l~g~tvgIiG~G~IG~~vA~~l~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~ 235 (328)
..|++|.|+|.|.+|...++.+ +.+|++ +++.+++.++. ++.. +-|....-.....+..+.. .
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~a-k~~G~~~vi~~~~~~~k~--~~a~-------~lGa~~~i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCA-VALGAKSVTAIDISSEKL--ALAK-------SFGAMQTFNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHH-HHTTCSEEEEEESCHHHH--HHHH-------HTTCSEEEETTTSCHHHHHHHHGGGC
T ss_pred CCCCEEEEECCCCcchHHHHHH-HHcCCcEEEEEechHHHH--HHHH-------HcCCeEEEeCCCCCHHHHHHhhcccC
Confidence 3588999999999999999985 789986 56778776432 2222 2233222111223444333 2
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 236 ~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
..|+|+-++.. +++ -+..++.++++..++.++
T Consensus 229 g~d~v~d~~G~-~~~----~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 229 FNQLILETAGV-PQT----VELAVEIAGPHAQLALVG 260 (346)
T ss_dssp SSEEEEECSCS-HHH----HHHHHHHCCTTCEEEECC
T ss_pred Ccccccccccc-cch----hhhhhheecCCeEEEEEe
Confidence 36888877652 222 245667788888888765
No 480
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.46 E-value=0.13 Score=45.64 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=33.8
Q ss_pred ccCCCEEEEEecC---HHHHHHHHHHHhcCCcEEEEEcCCchh
Q 020301 162 LLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQAT 201 (328)
Q Consensus 162 ~l~g~tvgIiG~G---~IG~~vA~~l~~~fg~~V~~~d~~~~~ 201 (328)
+|.||++-|-|.+ -||+++|+.|+ .-|++|+..+|+...
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la-~~Ga~Vvi~~r~~~~ 44 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLD-QLGAKLVFTYRKERS 44 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHH-HTTCEEEEEESSGGG
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-HCCCEEEEEECCHHH
Confidence 6899999999974 59999999985 789999999997643
No 481
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=93.43 E-value=0.22 Score=44.83 Aligned_cols=39 Identities=23% Similarity=0.211 Sum_probs=33.3
Q ss_pred cccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCch
Q 020301 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (328)
Q Consensus 161 ~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~ 200 (328)
..+.||++.|.|. |-||+++|+.|+ .-|++|+..+|+..
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~ 44 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVA-ADGANVALVAKSAE 44 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHH-TTTCEEEEEESCCS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECChh
Confidence 3588999999996 679999999985 77999999998864
No 482
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.42 E-value=0.72 Score=45.17 Aligned_cols=115 Identities=18% Similarity=0.214 Sum_probs=71.5
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCcEEEEE--------cCCc--hhHHHHHHhhhhhhhhcCCCCCccccccCCHH
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY--------DLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~~~--------d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (328)
+|.|+||.|-|+|++|+..|+.| ..+|++|++. |+.- ...+.++....+.. .+.. +.....+
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L-~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i---~~~~--~a~~~~~-- 312 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYL-HRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTI---LGFP--KAKIYEG-- 312 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSS---TTCT--TSEEECS--
T ss_pred CcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCe---eccc--Cceeecc--
Confidence 68999999999999999999997 5889999873 3321 11222221111100 0000 0111111
Q ss_pred HH-hhcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 232 EV-LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 232 el-l~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
++ -..||+++-|. +.+.|+.+...+++ -.+++-.|-+++ ..+|- +.|.+..|.
T Consensus 313 ~il~~~~DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p~-T~eA~-~iL~~rGIl 366 (501)
T 3mw9_A 313 SILEVDCDILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGPT-TPEAD-KIFLERNIM 366 (501)
T ss_dssp CGGGSCCSEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSCB-CHHHH-HHHHHTTCE
T ss_pred ccccccceEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCcC-CHHHH-HHHHHCCCE
Confidence 33 34799998774 36888888888886 568888899984 55553 556655453
No 483
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=93.39 E-value=0.15 Score=47.92 Aligned_cols=38 Identities=26% Similarity=0.409 Sum_probs=31.9
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCc-EEEEEcCCc
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ 199 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~-~V~~~d~~~ 199 (328)
..|.+++|.|||.|.+|..+|+.|+ ..|. ++..+|+..
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La-~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILA-TSGIGEIILIDNDQ 152 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEEECCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-hCCCCeEEEECCCc
Confidence 4689999999999999999999985 5565 788888753
No 484
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.39 E-value=0.23 Score=46.45 Aligned_cols=93 Identities=13% Similarity=0.177 Sum_probs=60.0
Q ss_pred CCCEEEEEe-cCHHHHHHHHHHHhc-CCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhh-----c
Q 020301 164 KGQTVGVIG-AGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (328)
Q Consensus 164 ~g~tvgIiG-~G~IG~~vA~~l~~~-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~ 236 (328)
.|.+|.|+| .|.+|...++.+ +. .|++|++.+++.... ++. ++-|....- ....++.+.+. .
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qla-k~~~g~~Vi~~~~~~~~~--~~~-------~~lGad~vi-~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIA-RQRTDLTVIATASRPETQ--EWV-------KSLGAHHVI-DHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHH-HHHCCSEEEEECSSHHHH--HHH-------HHTTCSEEE-CTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHhcCCEEEEEeCCHHHH--HHH-------HHcCCCEEE-eCCCCHHHHHHHhcCCC
Confidence 688999999 999999999985 66 599999999876432 121 222322111 11124444333 5
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcC
Q 020301 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (328)
Q Consensus 237 aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~a 272 (328)
.|+|+-++.. ++ .-...++.++++..++.++
T Consensus 240 ~Dvvid~~g~-~~----~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 240 PAFVFSTTHT-DK----HAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EEEEEECSCH-HH----HHHHHHHHSCTTCEEEECS
T ss_pred ceEEEECCCc-hh----hHHHHHHHhcCCCEEEEEC
Confidence 7889887662 11 1245677888888888774
No 485
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=93.39 E-value=0.25 Score=45.21 Aligned_cols=113 Identities=15% Similarity=0.235 Sum_probs=61.2
Q ss_pred CEEEEEecCHHHHHHHHHHH-hcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEEcC
Q 020301 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~-~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~ 244 (328)
.+|+|||.|.||+.+|-.|+ +++--++..||.......-+..| ......--.... ......+. +.++.||+|+++.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~D-L~h~~~~~~~~~-~i~~~~d~-~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMD-LAHAAAGIDKYP-KIVGGADY-SLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHH-HHHHHGGGTCCC-EEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhh-hhcccccCCCCC-eEecCCCH-HHhCCCCEEEEec
Confidence 37999999999999998753 34445899999976432111111 111000000001 11111233 5689999999886
Q ss_pred --CCCh-hhh-ccc--cH-------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 020301 245 --VLDK-TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVALV 283 (328)
Q Consensus 245 --plt~-~t~-~li--~~-------~~~~~mk~ga~lIN~aRG~~vde~aL~ 283 (328)
|..| .|| .++ |. +.+.+-.|+++++.++ ..+|.-..+
T Consensus 78 G~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs--NPvd~~t~i 127 (294)
T 2x0j_A 78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYI 127 (294)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec--CcchhhHHh
Confidence 3333 233 122 21 1333445788998884 345554443
No 486
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.33 E-value=0.19 Score=45.61 Aligned_cols=82 Identities=15% Similarity=0.114 Sum_probs=50.7
Q ss_pred ccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCC---CccccccCCHHHHhhcC
Q 020301 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ---PVTWKRASSMDEVLREA 237 (328)
Q Consensus 162 ~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ell~~a 237 (328)
.+.|+++.|.|. |-||+.+++.|+ .-|.+|++.+|+.... +.....+... ...+.. ........+++++++..
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLL-EHGYKVRGTARSASKL-ANLQKRWDAK-YPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHH-HHHHHHHHHH-STTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEeCCcccH-HHHHHHhhcc-CCCceEEEEecCCcChHHHHHHHcCC
Confidence 477899999998 999999999984 6799999999876432 1111110000 000000 00111234566778899
Q ss_pred CEEEEcCCC
Q 020301 238 DVISLHPVL 246 (328)
Q Consensus 238 DiV~l~~pl 246 (328)
|+|+.+...
T Consensus 85 d~vih~A~~ 93 (342)
T 1y1p_A 85 AGVAHIASV 93 (342)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeCCC
Confidence 999877654
No 487
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.31 E-value=0.11 Score=44.59 Aligned_cols=100 Identities=12% Similarity=-0.007 Sum_probs=57.6
Q ss_pred CEEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCC--ccccccCCHHHHhhcCCEEEE
Q 020301 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 166 ~tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ell~~aDiV~l 242 (328)
+++.|.| .|.||+.+++.| ..-|.+|++.+|+...... . ..+... .......+++++++.+|+|+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~---------~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 73 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEA-LNRGFEVTAVVRHPEKIKI---------E-NEHLKVKKADVSSLDEVCEVCKGADAVIS 73 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHH-HTTTCEEEEECSCGGGCCC---------C-CTTEEEECCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHH-HHCCCEEEEEEcCcccchh---------c-cCceEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 6899999 599999999998 4779999999998653110 0 000000 001112346788999999998
Q ss_pred cCCCChhhhccc------cHHHHhcCCC-C-cEEEEcCCCcc
Q 020301 243 HPVLDKTTYHLI------NKERLATMKK-E-AILVNCSRGPV 276 (328)
Q Consensus 243 ~~plt~~t~~li------~~~~~~~mk~-g-a~lIN~aRG~~ 276 (328)
+.........++ ....++.+++ + ..+|.+|....
T Consensus 74 ~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 115 (227)
T 3dhn_A 74 AFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115 (227)
T ss_dssp CCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTT
T ss_pred eCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhh
Confidence 876543222111 1223333321 2 36888776543
No 488
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.19 E-value=0.2 Score=48.53 Aligned_cols=120 Identities=17% Similarity=0.108 Sum_probs=69.3
Q ss_pred cccCCCEEEEEecCHHHHHHHHHHHhcCCcEEE-EEcCC-------c--hhHHHHHHhhhhhhhhcCC-CCC-----ccc
Q 020301 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY-------Q--ATRLEKFVTAYGQFLKANG-EQP-----VTW 224 (328)
Q Consensus 161 ~~l~g~tvgIiG~G~IG~~vA~~l~~~fg~~V~-~~d~~-------~--~~~~~~~~~~~~~~~~~~~-~~~-----~~~ 224 (328)
.++.|+||.|-|+|++|+..|+.| ...|++|+ +.|.+ - ...+....+ +.. ...+ ... .+.
T Consensus 235 ~~l~g~~VaVQG~GnVG~~aa~~L-~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~-~k~--~~~~~v~~~~~~~~~a 310 (456)
T 3r3j_A 235 DNLENKKCLVSGSGNVAQYLVEKL-IEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMD-IKN--NQRLRLKEYLKYSKTA 310 (456)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHH-HHHTCCBCCEECSSCEEECTTCCCHHHHHHHHH-HHH--TSCCCGGGGGGTCSSC
T ss_pred CCccCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCcEECCCCCCHHHHHHHHH-HHH--hcCcchhhhhhcCCCc
Confidence 468999999999999999999997 57899986 45532 1 011111000 000 0000 000 011
Q ss_pred cccCCHHHH-hhcCCEEEEcCCCChhhhccccHHHHhcCC--CCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 020301 225 KRASSMDEV-LREADVISLHPVLDKTTYHLINKERLATMK--KEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (328)
Q Consensus 225 ~~~~~l~el-l~~aDiV~l~~plt~~t~~li~~~~~~~mk--~ga~lIN~aRG~~vde~aL~~aL~~g~i~ 292 (328)
... +-+++ -..||+++-|. +.+.|+.+...+++ .=.+++-.|-+++-.+ | .+.|.+..|.
T Consensus 311 ~~v-~~~~i~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~e-A-~~iL~~rGI~ 373 (456)
T 3r3j_A 311 KYF-ENQKPWNIPCDIAFPCA-----TQNEINENDADLFIQNKCKMIVEGANMPTHIK-A-LHKLKQNNII 373 (456)
T ss_dssp EEE-CSCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHHTCCEEECCSSSCBCTT-H-HHHHHTTTCE
T ss_pred eEe-CCccccccCccEEEeCC-----CccchhhHHHHHHHhcCCeEEEecCCCCCCHH-H-HHHHHHCCCE
Confidence 111 22333 24699998774 36778888777772 2457888888886544 3 2566665443
No 489
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.19 E-value=0.34 Score=43.16 Aligned_cols=28 Identities=32% Similarity=0.614 Sum_probs=22.5
Q ss_pred EEEEEec-CHHHHHHHHHHHhcCCcEEEE
Q 020301 167 TVGVIGA-GRIGSAYARMMVEGFKMNLIY 194 (328)
Q Consensus 167 tvgIiG~-G~IG~~vA~~l~~~fg~~V~~ 194 (328)
+|+|+|+ |+||+.+++.+...-++++.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva 30 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSA 30 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence 6999995 999999999863333888774
No 490
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=93.19 E-value=0.12 Score=48.20 Aligned_cols=116 Identities=16% Similarity=0.170 Sum_probs=62.1
Q ss_pred CEEEEEecCHHHHHHHHHHHhc-----C--CcEEE-EEcCCchhHHH-----HHHhhhhhhhhcCCCCCccccccC---C
Q 020301 166 QTVGVIGAGRIGSAYARMMVEG-----F--KMNLI-YYDLYQATRLE-----KFVTAYGQFLKANGEQPVTWKRAS---S 229 (328)
Q Consensus 166 ~tvgIiG~G~IG~~vA~~l~~~-----f--g~~V~-~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~ 229 (328)
-++||||+|.||+.+++.+.+. . +++|. ++|++.....+ ++.+.+ .. + ... .... +
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~----~~-~--~~~-~~~~~~~d 78 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYK----EK-G--SLD-SLEYESIS 78 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHH----HT-T--CGG-GCCSEECC
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhh----cc-C--Ccc-cccCCCCC
Confidence 3799999999999999886421 1 46664 55766432110 011100 00 0 000 0123 7
Q ss_pred HHHHh-hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCC
Q 020301 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNP 290 (328)
Q Consensus 230 l~ell-~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aRG~~v-de~aL~~aL~~g~ 290 (328)
+++++ ...|+|+.|.|.. .|.+.--+-..+.++.|.-+|...-..+. +-+.|.++-++..
T Consensus 79 ~~~ll~~~iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~g 140 (331)
T 3c8m_A 79 ASEALARDFDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNN 140 (331)
T ss_dssp HHHHHHSSCSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcC
Confidence 88888 3589999999964 22111112334455666666654333332 3356666655543
No 491
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=93.18 E-value=0.2 Score=44.85 Aligned_cols=40 Identities=23% Similarity=0.152 Sum_probs=33.4
Q ss_pred cccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchh
Q 020301 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (328)
Q Consensus 161 ~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~ 201 (328)
..+.||++.|.|. |-||+++|+.|+ .-|++|++.+++...
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~ 65 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTE 65 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchH
Confidence 4578999999985 689999999985 679999999987643
No 492
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.15 E-value=0.45 Score=43.49 Aligned_cols=120 Identities=15% Similarity=0.179 Sum_probs=63.9
Q ss_pred EEEEEe-cCHHHHHHHHHHHh-cCCcEEEEEcC--CchhHHHHHHhhhhhhhhcCCCCCccccccCCHHHHhhcCCEEEE
Q 020301 167 TVGVIG-AGRIGSAYARMMVE-GFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (328)
Q Consensus 167 tvgIiG-~G~IG~~vA~~l~~-~fg~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (328)
+|+|+| .|.+|+.++..|+. +..-++..+|+ .... .+........... .. ....... .+ .+.++.||+|++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~-~~~~~~dl~~~~~-~~-~~~~v~~-~~-~~a~~~aDvVi~ 76 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDD-TVGQAADTNHGIA-YD-SNTRVRQ-GG-YEDTAGSDVVVI 76 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHH-HHHHHHHHHHHHT-TT-CCCEEEE-CC-GGGGTTCSEEEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhh-HHHHHHHHHHHHh-hC-CCcEEEe-CC-HHHhCCCCEEEE
Confidence 799999 99999999998743 23337888998 5422 1111111111000 00 1111111 23 667999999999
Q ss_pred cCCCChhhhcc-----------ccH---HHHhcCCCCcEEEEcCCCcccCH--HHHHHH--HHcCCccEE
Q 020301 243 HPVLDKTTYHL-----------INK---ERLATMKKEAILVNCSRGPVIDE--VALVEH--LKQNPMFRV 294 (328)
Q Consensus 243 ~~plt~~t~~l-----------i~~---~~~~~mk~ga~lIN~aRG~~vde--~aL~~a--L~~g~i~ga 294 (328)
+..... ..++ +-+ +.+.+..|++++++.+- .+|. ..+.+. +...++.|.
T Consensus 77 ~ag~~~-~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN--Pv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 77 TAGIPR-QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN--PVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp CCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS--SHHHHHHHHHHHSSSCGGGEEEC
T ss_pred cCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC--hHHHHHHHHHHHcCCCHHHeeec
Confidence 876432 1111 111 22333467899999744 4443 333333 333356655
No 493
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.13 E-value=0.27 Score=47.25 Aligned_cols=95 Identities=20% Similarity=0.167 Sum_probs=61.0
Q ss_pred cCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCccccc---------------
Q 020301 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--------------- 226 (328)
Q Consensus 163 l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 226 (328)
-.|++|.|+|. |.||...++.+ +..|++|++.+++.... ++...+ |........
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla-~~~Ga~vi~~~~~~~~~--~~~~~l-------Ga~~~i~~~~~~~~~~~~~~~~~~ 288 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFV-KNGGGIPVAVVSSAQKE--AAVRAL-------GCDLVINRAELGITDDIADDPRRV 288 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH--HHHHHT-------TCCCEEEHHHHTCCTTGGGCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH--HHHHhc-------CCCEEEeccccccccccccccccc
Confidence 36899999998 99999999985 79999999998765432 122222 221110000
Q ss_pred -------cCCHHHHh-hcCCEEEEcCCCChhhhccccHHHHhcCCCCcEEEEcCC
Q 020301 227 -------ASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (328)
Q Consensus 227 -------~~~l~ell-~~aDiV~l~~plt~~t~~li~~~~~~~mk~ga~lIN~aR 273 (328)
...+.++. ...|+|+-++.. + .-...+..|+++..+|+++-
T Consensus 289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G~--~----~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 289 VETGRKLAKLVVEKAGREPDIVFEHTGR--V----TFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHHHHSSCCSEEEECSCH--H----HHHHHHHHSCTTCEEEESCC
T ss_pred chhhhHHHHHHHHHhCCCceEEEECCCc--h----HHHHHHHHHhcCCEEEEEec
Confidence 00111222 258999988763 2 12567788999999999863
No 494
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.04 E-value=0.077 Score=45.96 Aligned_cols=75 Identities=12% Similarity=0.142 Sum_probs=50.0
Q ss_pred cCCCEEEEEe-cCHHHHHHHHHHHhcCCc--EEEEEcCCchhHHHHHHhhhhhhhhcCCCC--CccccccCCHHHHhhcC
Q 020301 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKRASSMDEVLREA 237 (328)
Q Consensus 163 l~g~tvgIiG-~G~IG~~vA~~l~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ell~~a 237 (328)
+.++++.|.| .|.||+.+++.|+ .-|. +|++.+|+.....+. ...+.. ........+++++++..
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~-~~G~~~~V~~~~r~~~~~~~~---------~~~~~~~~~~D~~d~~~~~~~~~~~ 85 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEIL-EQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFEKLDDYASAFQGH 85 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHH-HHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGGGGGGGGGGGSSC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHH-cCCCCCEEEEEEcCCCCcccc---------ccCCceEEecCcCCHHHHHHHhcCC
Confidence 5688999999 6999999999985 6688 999999876431100 000000 00111224567788899
Q ss_pred CEEEEcCCCC
Q 020301 238 DVISLHPVLD 247 (328)
Q Consensus 238 DiV~l~~plt 247 (328)
|+|+.+....
T Consensus 86 d~vi~~ag~~ 95 (242)
T 2bka_A 86 DVGFCCLGTT 95 (242)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCcc
Confidence 9999988754
No 495
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=93.03 E-value=0.064 Score=50.02 Aligned_cols=105 Identities=15% Similarity=0.145 Sum_probs=61.1
Q ss_pred CCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcc---ccccCCHHHHhhcCCE
Q 020301 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT---WKRASSMDEVLREADV 239 (328)
Q Consensus 164 ~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ell~~aDi 239 (328)
.++++.|.|. |.||+.+++.|+ .-|.+|++.+|+......+.... ..+..... .....++.++++.+|+
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~l~~------~~~v~~v~~D~l~d~~~l~~~~~~~d~ 76 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAA-AVGHHVRAQVHSLKGLIAEELQA------IPNVTLFQGPLLNNVPLMDTLFEGAHL 76 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCSCSHHHHHHHT------STTEEEEESCCTTCHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEECCCChhhHHHHhh------cCCcEEEECCccCCHHHHHHHHhcCCE
Confidence 3678999995 999999999975 56899999988764321111000 00110000 1111246778999999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCC-C--cEEEEcCCCc
Q 020301 240 ISLHPVLDKTTYHLINKERLATMKK-E--AILVNCSRGP 275 (328)
Q Consensus 240 V~l~~plt~~t~~li~~~~~~~mk~-g--a~lIN~aRG~ 275 (328)
|+.+...............++.++. | ..||++|...
T Consensus 77 Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 77 AFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp EEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred EEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 9877654311122223445554432 3 4788887754
No 496
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.00 E-value=0.17 Score=43.64 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=48.5
Q ss_pred cCCCEEEEEe-cCHHHHHHHHHHHhcC--CcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCc--cccccCCHHHHhhcC
Q 020301 163 LKGQTVGVIG-AGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (328)
Q Consensus 163 l~g~tvgIiG-~G~IG~~vA~~l~~~f--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~a 237 (328)
..++++.|.| .|.||+.+++.|+ .- |.+|++.+|+.... +.. ..+.... ......+++++++..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~-~~~~g~~V~~~~r~~~~~-~~~---------~~~~~~~~~D~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLK-EGSDKFVAKGLVRSAQGK-EKI---------GGEADVFIGDITDADSINPAFQGI 70 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHH-HTTTTCEEEEEESCHHHH-HHT---------TCCTTEEECCTTSHHHHHHHHTTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHH-hcCCCcEEEEEEcCCCch-hhc---------CCCeeEEEecCCCHHHHHHHHcCC
Confidence 3578999999 5999999999985 55 89999999976432 110 0011100 011123567888999
Q ss_pred CEEEEcCCC
Q 020301 238 DVISLHPVL 246 (328)
Q Consensus 238 DiV~l~~pl 246 (328)
|+|+.+...
T Consensus 71 d~vi~~a~~ 79 (253)
T 1xq6_A 71 DALVILTSA 79 (253)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeccc
Confidence 999887754
No 497
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.93 E-value=0.18 Score=46.95 Aligned_cols=37 Identities=19% Similarity=0.435 Sum_probs=32.3
Q ss_pred CCCEEEEEecCHHHHHHHHHHHhcC-CcEEEEEcCCchh
Q 020301 164 KGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQAT 201 (328)
Q Consensus 164 ~g~tvgIiG~G~IG~~vA~~l~~~f-g~~V~~~d~~~~~ 201 (328)
.|.+|.|+|.|.+|...++.+ +.+ |++|++.+++...
T Consensus 186 ~g~~VlV~GaG~vG~~avqla-k~~~Ga~Vi~~~~~~~~ 223 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLL-KVMTPATVIALDVKEEK 223 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHCCCEEEEEESSHHH
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEeCCHHH
Confidence 478999999999999999984 788 9999999987643
No 498
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.91 E-value=0.27 Score=41.90 Aligned_cols=70 Identities=14% Similarity=0.128 Sum_probs=47.3
Q ss_pred EEEEEe-cCHHHHHHHHHHHhcCCcEEEEEcCCchhHHHHHHhhhhhhhhcCCCCCcc--ccc-cCCHHHHhhcCCEEEE
Q 020301 167 TVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT--WKR-ASSMDEVLREADVISL 242 (328)
Q Consensus 167 tvgIiG-~G~IG~~vA~~l~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~l~ell~~aDiV~l 242 (328)
++.|.| .|.||+.+++.| ..-|.+|++.+|+...... ..+..... ... ..++.++++++|+|+.
T Consensus 2 ~ilItGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSL-STTDYQIYAGARKVEQVPQ-----------YNNVKAVHFDVDWTPEEMAKQLHGMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHH-TTSSCEEEEEESSGGGSCC-----------CTTEEEEECCTTSCHHHHHTTTTTCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCccchhh-----------cCCceEEEecccCCHHHHHHHHcCCCEEEE
Confidence 688999 799999999998 5779999999998653110 00000000 111 2346677889999998
Q ss_pred cCCCCh
Q 020301 243 HPVLDK 248 (328)
Q Consensus 243 ~~plt~ 248 (328)
+.....
T Consensus 70 ~ag~~~ 75 (219)
T 3dqp_A 70 VSGSGG 75 (219)
T ss_dssp CCCCTT
T ss_pred CCcCCC
Confidence 887654
No 499
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=92.88 E-value=0.076 Score=51.90 Aligned_cols=38 Identities=21% Similarity=0.398 Sum_probs=29.8
Q ss_pred ccCCCEEEEEecCHHHHHHHHHHHhcCCc---EEEEEcCCch
Q 020301 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQA 200 (328)
Q Consensus 162 ~l~g~tvgIiG~G~IG~~vA~~l~~~fg~---~V~~~d~~~~ 200 (328)
.+.+ +|.|||+|.||+.+|+.|++..++ +|+..|+...
T Consensus 11 ~~~~-rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~ 51 (480)
T 2ph5_A 11 LFKN-RFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT 51 (480)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC
T ss_pred cCCC-CEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh
Confidence 3444 489999999999999998776666 6888887643
No 500
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=92.82 E-value=0.16 Score=45.70 Aligned_cols=39 Identities=23% Similarity=0.228 Sum_probs=31.1
Q ss_pred ccccCCCEEEEEec-CHHHHHHHHHHHhcCCcEEEEEcCCc
Q 020301 160 GNLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (328)
Q Consensus 160 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~~fg~~V~~~d~~~ 199 (328)
..++.||++.|.|. |-||+++|+.|+ .-|++|++.+++.
T Consensus 18 ~~~l~~k~~lVTGas~gIG~aia~~L~-~~G~~V~~~~r~~ 57 (288)
T 2x9g_A 18 GSHMEAPAAVVTGAAKRIGRAIAVKLH-QTGYRVVIHYHNS 57 (288)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHH-HHTCEEEEEESSC
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHH-HCCCeEEEEeCCc
Confidence 35689999999985 789999999985 6799999999986
Done!