Query 020306
Match_columns 328
No_of_seqs 207 out of 1844
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 14:54:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020306.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020306hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dmp_A Uracil phosphoribosyltr 100.0 1.2E-59 4E-64 431.2 20.3 208 116-328 8-215 (217)
2 1xtt_A Probable uracil phospho 100.0 4.2E-58 1.5E-62 420.6 21.6 206 117-327 1-216 (216)
3 1v9s_A Uracil phosphoribosyltr 100.0 1.7E-57 5.8E-62 414.5 22.3 207 117-328 1-207 (208)
4 1bd3_D Uprtase, uracil phospho 100.0 4.8E-57 1.6E-61 420.1 25.1 208 117-328 34-242 (243)
5 2ehj_A Uracil phosphoribosyltr 100.0 3.8E-57 1.3E-61 412.2 22.0 206 118-328 2-207 (208)
6 1o5o_A Uracil phosphoribosyltr 100.0 1.6E-56 5.6E-61 411.4 22.8 208 116-328 13-220 (221)
7 2e55_A Uracil phosphoribosyltr 100.0 8.7E-55 3E-59 396.6 23.4 204 119-328 2-205 (208)
8 1i5e_A Uracil phosphoribosyltr 100.0 6.6E-53 2.3E-57 383.6 22.9 207 117-328 2-208 (209)
9 3s5j_B Ribose-phosphate pyroph 99.4 1.9E-13 6.4E-18 131.8 7.4 174 115-326 122-304 (326)
10 1dku_A Protein (phosphoribosyl 99.4 4.9E-13 1.7E-17 128.2 8.9 171 117-327 130-308 (317)
11 3dah_A Ribose-phosphate pyroph 99.4 5.9E-13 2E-17 128.0 7.9 173 115-327 127-308 (319)
12 2ji4_A Phosphoribosyl pyrophos 99.3 6.9E-12 2.4E-16 123.1 8.5 177 115-326 150-363 (379)
13 3lrt_A Ribose-phosphate pyroph 99.3 1.9E-11 6.5E-16 115.9 11.2 167 115-325 116-284 (286)
14 3o7m_A Hypoxanthine phosphorib 99.3 1.1E-10 3.6E-15 104.0 15.3 119 140-287 14-137 (186)
15 3hvu_A Hypoxanthine phosphorib 99.3 1.5E-10 5E-15 104.8 16.0 119 141-287 37-159 (204)
16 2ywu_A Hypoxanthine-guanine ph 99.2 1.7E-10 5.9E-15 102.1 14.9 121 138-287 13-138 (181)
17 3ohp_A Hypoxanthine phosphorib 99.2 1.6E-10 5.6E-15 101.9 14.4 118 140-286 10-133 (177)
18 1u9y_A RPPK;, ribose-phosphate 99.2 1.3E-11 4.6E-16 116.5 7.7 163 116-321 118-283 (284)
19 3ozf_A Hypoxanthine-guanine-xa 99.2 9.3E-11 3.2E-15 109.2 11.0 128 128-287 57-199 (250)
20 2geb_A Hypoxanthine-guanine ph 99.2 2.9E-10 9.9E-15 100.2 12.9 148 141-321 19-179 (185)
21 2jbh_A Phosphoribosyltransfera 99.1 1.7E-10 5.9E-15 105.1 9.6 122 137-286 42-176 (225)
22 1z7g_A HGPRT, HGPRTASE, hypoxa 99.1 1.5E-10 5E-15 105.1 8.4 140 134-305 31-183 (217)
23 1hgx_A HGXPRTASE, hypoxanthine 99.1 6.5E-10 2.2E-14 97.6 11.8 135 140-306 16-154 (183)
24 1pzm_A HGPRT, hypoxanthine-gua 99.1 5.6E-10 1.9E-14 100.8 10.0 125 139-286 28-160 (211)
25 1wd5_A Hypothetical protein TT 99.0 2.1E-09 7.1E-14 96.3 12.4 68 234-307 113-180 (208)
26 1fsg_A HGPRTASE, hypoxanthine- 99.0 1.8E-09 6.2E-14 98.9 11.5 121 138-286 49-184 (233)
27 1tc1_A Protein (hypoxanthine p 99.0 4.8E-09 1.7E-13 95.5 14.0 124 140-286 13-145 (220)
28 1yfz_A Hypoxanthine-guanine ph 98.9 4E-09 1.4E-13 94.3 11.2 150 139-321 37-199 (205)
29 3acd_A Hypoxanthine-guanine ph 98.9 1.3E-08 4.5E-13 90.2 14.3 118 140-285 15-136 (181)
30 1vdm_A Purine phosphoribosyltr 98.9 4.7E-09 1.6E-13 88.9 10.6 93 190-286 29-125 (153)
31 1w30_A PYRR bifunctional prote 98.9 3.5E-09 1.2E-13 94.9 10.1 125 140-284 18-153 (201)
32 1ufr_A TT1027, PYR mRNA-bindin 98.9 1.1E-08 3.8E-13 89.4 12.7 138 140-310 9-158 (181)
33 2aee_A OPRT, oprtase, orotate 98.9 4.3E-10 1.5E-14 101.1 3.1 117 190-316 71-193 (211)
34 1a3c_A PYRR, pyrimidine operon 98.9 9.8E-09 3.4E-13 89.5 10.6 117 141-284 10-139 (181)
35 2yzk_A OPRT, oprtase, orotate 98.6 2.7E-07 9.1E-12 80.8 11.6 101 190-303 61-164 (178)
36 2xbu_A Hypoxanthine-guanine ph 98.6 1.7E-07 5.9E-12 85.2 9.8 96 189-285 31-161 (221)
37 1dqn_A Guanine phosphoribosylt 98.5 7.7E-08 2.6E-12 88.4 6.2 125 126-285 27-154 (230)
38 2dy0_A APRT, adenine phosphori 98.5 2.8E-07 9.6E-12 81.2 9.5 59 241-303 125-185 (190)
39 3m3h_A OPRT, oprtase, orotate 98.5 2.1E-07 7.1E-12 85.7 9.0 103 190-303 91-196 (234)
40 1qb7_A APRT, adenine phosphori 98.5 3E-07 1E-11 84.3 9.9 70 238-309 134-209 (236)
41 3dez_A OPRT, oprtase, orotate 98.5 4.2E-07 1.4E-11 84.2 10.9 102 190-303 103-208 (243)
42 1zn8_A APRT, adenine phosphori 98.5 4.5E-07 1.5E-11 79.0 10.4 96 190-291 60-169 (180)
43 2p1z_A Phosphoribosyltransfera 98.5 5.9E-07 2E-11 78.8 11.0 105 190-303 66-172 (180)
44 2wns_A Orotate phosphoribosylt 98.5 3.9E-07 1.3E-11 81.6 9.7 103 190-303 65-169 (205)
45 1y0b_A Xanthine phosphoribosyl 98.5 5.3E-07 1.8E-11 79.6 10.4 51 241-293 119-171 (197)
46 1l1q_A Adenine phosphoribosylt 98.5 5.9E-07 2E-11 79.0 9.8 100 190-293 56-170 (186)
47 1g2q_A Adenine phosphoribosylt 98.4 3.9E-07 1.3E-11 80.1 7.6 102 190-302 62-177 (187)
48 2ps1_A Orotate phosphoribosylt 98.3 2.3E-06 8E-11 77.6 9.1 87 191-284 71-165 (226)
49 3mjd_A Orotate phosphoribosylt 98.2 2.8E-06 9.5E-11 78.1 8.7 86 190-284 84-176 (232)
50 3n2l_A OPRT, oprtase, orotate 98.1 1.2E-05 4E-10 74.3 10.5 103 190-303 91-207 (238)
51 1nul_A XPRT, xanthine-guanine 98.1 2.6E-06 8.8E-11 72.7 5.6 85 190-285 31-117 (152)
52 1lh0_A OMP synthase; loop clos 98.1 1.4E-05 4.8E-10 71.9 10.0 103 190-303 66-182 (213)
53 1vch_A Phosphoribosyltransfera 98.1 3.3E-06 1.1E-10 72.9 5.0 44 241-286 119-162 (175)
54 1o57_A PUR operon repressor; p 98.0 1.7E-05 5.7E-10 75.1 9.0 44 241-286 195-238 (291)
55 1ecf_A Glutamine phosphoribosy 97.9 2.5E-05 8.5E-10 78.8 8.6 86 190-280 297-395 (504)
56 3qw4_B UMP synthase; N-termina 97.9 1.8E-05 6.1E-10 79.3 6.8 115 190-316 319-440 (453)
57 1ao0_A Glutamine phosphoribosy 97.6 3.1E-05 1.1E-09 77.1 4.3 40 237-279 334-373 (459)
58 1vp8_A Hypothetical protein AF 38.3 1.3E+02 0.0045 26.7 8.4 46 254-303 28-73 (201)
59 3f6p_A Transcriptional regulat 38.2 90 0.0031 23.0 6.6 11 243-253 3-13 (120)
60 3i42_A Response regulator rece 37.4 1.1E+02 0.0037 22.5 7.0 9 243-251 4-12 (127)
61 3hix_A ALR3790 protein; rhodan 37.0 92 0.0032 23.4 6.5 44 241-294 51-94 (106)
62 3gl9_A Response regulator; bet 36.9 82 0.0028 23.4 6.2 11 243-253 3-13 (122)
63 3eod_A Protein HNR; response r 36.6 87 0.003 23.2 6.3 26 242-270 7-32 (130)
64 3kht_A Response regulator; PSI 35.9 90 0.0031 23.6 6.4 26 242-270 5-30 (144)
65 3grc_A Sensor protein, kinase; 34.6 1.2E+02 0.0042 22.6 7.0 49 242-298 6-54 (140)
66 3hnn_A Putative diflavin flavo 34.1 82 0.0028 27.6 6.6 58 243-303 51-112 (262)
67 3ilm_A ALR3790 protein; rhodan 34.0 1.4E+02 0.0049 23.8 7.6 52 239-302 53-104 (141)
68 2zo4_A Metallo-beta-lactamase 33.8 80 0.0027 28.1 6.5 63 242-306 30-96 (317)
69 3t6k_A Response regulator rece 33.4 1.3E+02 0.0043 22.8 6.9 49 243-299 5-53 (136)
70 3eul_A Possible nitrate/nitrit 33.3 1.2E+02 0.0041 23.2 6.8 11 242-252 15-25 (152)
71 3lte_A Response regulator; str 33.2 1.2E+02 0.0042 22.3 6.7 50 242-299 6-55 (132)
72 3h5i_A Response regulator/sens 32.6 1.1E+02 0.0037 23.2 6.3 12 242-253 5-16 (140)
73 3dah_A Ribose-phosphate pyroph 30.6 2.1E+02 0.0072 26.8 9.1 83 189-280 8-94 (319)
74 2gcu_A Putative hydroxyacylglu 30.5 1.2E+02 0.004 26.5 7.0 58 242-305 27-88 (245)
75 3m8t_A 'BLR6230 protein; subcl 30.2 67 0.0023 28.1 5.3 61 242-305 63-127 (294)
76 1gmx_A GLPE protein; transfera 28.7 91 0.0031 23.4 5.2 45 241-295 57-101 (108)
77 2vw8_A PA1000, PQSE; quinolone 27.6 1.1E+02 0.0037 27.2 6.2 60 242-304 33-97 (303)
78 3rqi_A Response regulator prot 27.5 1.3E+02 0.0043 24.3 6.3 15 242-256 7-21 (184)
79 1k68_A Phytochrome response re 27.1 1.5E+02 0.0051 21.8 6.2 11 242-252 2-12 (140)
80 3mm4_A Histidine kinase homolo 26.7 1.6E+02 0.0056 24.3 7.0 44 242-292 61-104 (206)
81 3hv2_A Response regulator/HD d 26.3 1.8E+02 0.0061 22.3 6.7 11 242-252 14-24 (153)
82 3gk5_A Uncharacterized rhodane 26.0 1.6E+02 0.0055 22.1 6.2 43 241-294 54-96 (108)
83 3f6c_A Positive transcription 25.9 2E+02 0.0068 21.1 7.5 9 244-252 3-11 (134)
84 2j48_A Two-component sensor ki 25.0 1.6E+02 0.0055 20.7 5.8 12 243-254 2-13 (119)
85 3to5_A CHEY homolog; alpha(5)b 23.3 1.7E+02 0.0057 23.4 6.1 50 242-298 12-61 (134)
86 3gt7_A Sensor protein; structu 22.5 1.7E+02 0.0057 22.6 5.9 13 242-254 7-19 (154)
87 3ilh_A Two component response 22.4 2.4E+02 0.0082 20.9 6.7 10 242-251 9-18 (146)
88 1mb3_A Cell division response 22.2 1.9E+02 0.0065 20.8 5.9 10 244-253 3-12 (124)
89 2jtq_A Phage shock protein E; 22.1 1.6E+02 0.0054 20.9 5.2 32 241-277 40-71 (85)
90 4ax1_B Metallo-beta-lactamase 21.8 77 0.0026 27.7 4.0 60 242-304 66-129 (303)
91 3foj_A Uncharacterized protein 21.7 1.4E+02 0.0048 22.0 5.0 42 240-292 54-95 (100)
92 1k07_A FEZ-1 beta-lactamase; m 21.5 1.3E+02 0.0043 26.0 5.4 60 242-304 33-96 (263)
93 3s5j_B Ribose-phosphate pyroph 21.3 5E+02 0.017 24.3 9.8 78 195-280 9-90 (326)
94 4efz_A Metallo-beta-lactamase 21.3 1.6E+02 0.0054 26.2 6.1 58 242-303 27-96 (298)
95 3m6m_D Sensory/regulatory prot 20.9 1.8E+02 0.0063 22.1 5.7 10 242-251 14-23 (143)
96 4e7p_A Response regulator; DNA 20.8 2.2E+02 0.0075 21.6 6.2 11 242-252 20-30 (150)
97 3cg4_A Response regulator rece 20.7 2.3E+02 0.0078 21.0 6.2 18 287-304 70-89 (142)
98 2rdm_A Response regulator rece 20.6 2E+02 0.0067 21.0 5.7 12 243-254 6-17 (132)
99 1qh5_A Glyoxalase II, protein 20.4 1.3E+02 0.0043 26.7 5.2 52 242-303 22-79 (260)
100 2b4a_A BH3024; flavodoxin-like 20.3 2.2E+02 0.0074 21.2 6.0 21 241-261 14-34 (138)
No 1
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=100.00 E-value=1.2e-59 Score=431.24 Aligned_cols=208 Identities=32% Similarity=0.631 Sum_probs=197.0
Q ss_pred ceEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEc
Q 020306 116 RMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPIL 195 (328)
Q Consensus 116 ~~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsIL 195 (328)
++.+++.+||++++++|+|||++|++.+||++++||+++|+|||+++ +|+++.+|+||+|.+.+..+. ++++|+|+||
T Consensus 8 ~~~v~v~~hp~i~~~lt~lRd~~t~~~~Fr~~~~rl~~lL~yEa~~~-lp~~~~~V~TP~g~~~g~~~~-~~~i~~V~Il 85 (217)
T 3dmp_A 8 FPNLFILDHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRN-LPITTKRVETPLVEIDAPVIA-GKKLAIVPVL 85 (217)
T ss_dssp CTTEEEECCHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEEECSSCEEEEEEEC-GGGEEEEEEE
T ss_pred CCCeEecCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhc-CCceeEEEECCCeEEEEEEec-CCcEEEEEec
Confidence 34677889999999999999999999999999999999999999998 999999999999965555554 3679999999
Q ss_pred CcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccE
Q 020306 196 RAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQI 275 (328)
Q Consensus 196 RaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I 275 (328)
|+|++|++++++++|++++|++++|||+.+ +++.||.++| +++ +++|||+|||||||+|+.+|++.|+++|+++++|
T Consensus 86 RaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t-~p~~~~~~lP-~i~-~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I 162 (217)
T 3dmp_A 86 RAGVGMSDGLLELIPSARVGHIGVYRADDH-RPVEYLVRLP-DLE-DRIFILCDPMVATGYSAAHAIDVLKRRGVPGERL 162 (217)
T ss_dssp TTTHHHHHHHHHHCTTSEECEEECSCCCSS-SCCCSEEECC-CCT-TCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGE
T ss_pred ccchHHHHHHHHhCcCCceeEEEEEECCCC-CcEEEeecCC-CCC-CCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeE
Confidence 999999999999999999999999999999 8999999999 998 8999999999999999999999999999977899
Q ss_pred EEEEEeeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhhhCC
Q 020306 276 KVISAVAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 328 (328)
Q Consensus 276 ~vv~~vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~fGt 328 (328)
.+++++++++|++++.++||+++|||++||++|||+|||+|||||||||+|||
T Consensus 163 ~~~~~vaa~egl~~l~~~~P~v~i~ta~iD~~Lne~~yIvPGlGDaGDR~fgt 215 (217)
T 3dmp_A 163 MFLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDDHAYIVPGLGDAGDRLFGT 215 (217)
T ss_dssp EEECSEECHHHHHHHHHHCTTCEEEESEECCEECTTSCEESSCSCHHHHHHC-
T ss_pred EEEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCCCccCCCCCHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999997
No 2
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=100.00 E-value=4.2e-58 Score=420.64 Aligned_cols=206 Identities=34% Similarity=0.565 Sum_probs=194.3
Q ss_pred eEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeee-eecCCCCeeEEEEc
Q 020306 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVE-FIDPREPVAVIPIL 195 (328)
Q Consensus 117 ~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~-~i~~~~~i~iVsIL 195 (328)
|.+++.+||++++++|+|||++|++.+||++++||+++|+|||+++ +|+++.+|+||+|.+..+ .+...+++|+|+|+
T Consensus 1 m~v~v~~hp~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~-l~~~~~~v~TP~g~~~~~~~~~~~~~i~iV~Il 79 (216)
T 1xtt_A 1 MPLYVIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNT-LDYEIVEVETPLGVKTKGVDITDLNNIVIINIL 79 (216)
T ss_dssp -CEEECCCHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT-SCCEEEEEECTTSCEEEEEECGGGGSEEEEEEE
T ss_pred CceEEcCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCceeEEEECCCccEecceEecCCCcEEEEeec
Confidence 4578899999999999999999999999999999999999999998 999999999999987655 35422689999999
Q ss_pred CcChHHHHHHhccCCCCeeEEEEEeecCCc-------ccceeeecCCCCCCCCCC--EEEEEcCcccchHHHHHHHHHHH
Q 020306 196 RAGLVLVEHASSILPAIKTYHLGISRDEET-------LQPSIYLNKLPEKFPEGS--RIFVVDPMLATGGTVVAALNLVK 266 (328)
Q Consensus 196 RaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t-------~e~~~yy~kLP~dI~~g~--~VlLvDd~LATGgTl~aai~~L~ 266 (328)
|+|++|++++++++|.+++|+|++|||+.+ .+++.||.++| +++ ++ +|+|+|||||||+|+.+|++.|+
T Consensus 80 RaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~p~~~y~klP-~i~-~~~~~VilvDp~laTG~T~~~ai~~L~ 157 (216)
T 1xtt_A 80 RAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKKIP-DIR-AKVDNVIIADPMIATASTMLKVLEEVV 157 (216)
T ss_dssp TTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCCSCCCEEEEEEECC-CCC-TTTCEEEEECSEESSSHHHHHHHHHHG
T ss_pred CCcHHHHHHHHHHcccCccceEEEEECCCcccccccccCceEeeccCC-Ccc-CCcceEEEEcCCccchHHHHHHHHHHH
Confidence 999999999999999999999999999887 78999999999 998 68 99999999999999999999999
Q ss_pred HcCCCcccEEEEEEeeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhhhC
Q 020306 267 ECGVENKQIKVISAVAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFG 327 (328)
Q Consensus 267 ~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~fG 327 (328)
+ |++ ++|.+++++++++|++++.++||+++|||++||++|||+|||+|||||||||+||
T Consensus 158 ~-G~p-~~I~~~~~vaa~~gl~~l~~~~P~v~I~ta~iD~~Lne~~yIvPGlGDaGDR~fg 216 (216)
T 1xtt_A 158 K-ANP-KRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG 216 (216)
T ss_dssp G-GCC-SEEEEECSEEEHHHHHHHHHHCTTSEEEESEEESEECTTSCEESSCSCHHHHHHC
T ss_pred h-CCC-CeEEEEEEecCHHHHHHHHHHCCCcEEEEEEecCCcCCCCCccCCCCChHhhccC
Confidence 9 974 8999999999999999999999999999999999999999999999999999998
No 3
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=100.00 E-value=1.7e-57 Score=414.48 Aligned_cols=207 Identities=40% Similarity=0.693 Sum_probs=189.5
Q ss_pred eEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcC
Q 020306 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILR 196 (328)
Q Consensus 117 ~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILR 196 (328)
|.+++++||++++++|+|||++|++.+||++++||+++|+|||+++ +|+++.+|+||.|.+.+..+. ++++|+|+|||
T Consensus 1 m~v~v~~~p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~-l~~~~~~v~TP~g~~~g~~~~-g~~l~~V~ILr 78 (208)
T 1v9s_A 1 MRITLVDHPLVQHKLAHLRDKRTGPKDFRELAEEVAMLMAYEAMRD-LELEETTVETPIAPARVKVLS-GKKLALVAILR 78 (208)
T ss_dssp CCEEECCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEEECSSSEEEEEEEC-SSCCEEEEETT
T ss_pred CceEEcCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHcc-CCCeEEEEECCCceEEEEEec-CCceEEEEecc
Confidence 3588999999999999999999999999999999999999999998 999999999999976566665 46899999999
Q ss_pred cChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEE
Q 020306 197 AGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIK 276 (328)
Q Consensus 197 aGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~ 276 (328)
+|++|++++.+.+|.+++|+|+++||+.+.+++.||.++|.+++ +++|+|+|||+|||+|+.+|++.|+++|+ ++|.
T Consensus 79 aG~~~~~~l~~~ip~~~vg~I~~~rd~~t~~~~~~~~~lp~di~-~r~vilvDd~laTG~T~~~ai~~L~~~G~--~~I~ 155 (208)
T 1v9s_A 79 AGLVMVEGILKLVPHARVGHIGLYRDPESLNPVQYYIKLPPDIA-ERRAFLLDPMLATGGSASLALSLLKERGA--TGVK 155 (208)
T ss_dssp THHHHHHHHHTTCTTCEEEEEEEC---------CEEEECCSCGG-GSCEEEECSEESSSHHHHHHHHHHHHTTC--CSCE
T ss_pred chHHHHHHHHHhCCCCeeeEEEEEEcCCCCCceEEeccCCCccC-CCEEEEECCccccHHHHHHHHHHHHHcCC--CEEE
Confidence 99999999999999999999999999999999999999999998 89999999999999999999999999997 6999
Q ss_pred EEEEeeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhhhCC
Q 020306 277 VISAVAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 328 (328)
Q Consensus 277 vv~~vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~fGt 328 (328)
+++++++++|++++.+.||++.|||++||++|||+|||+|||||||||+|||
T Consensus 156 ~~~lv~~~~g~~~l~~~~p~v~I~t~~iD~~lne~~yIvPGlGDaGDR~fgt 207 (208)
T 1v9s_A 156 LMAILAAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGDRIYGT 207 (208)
T ss_dssp EEEEEECHHHHHHHHHHCTTCEEEEEEECSEECTTSCEESSCSCHHHHHHTC
T ss_pred EEEEEeCHHHHHHHHHHCCCcEEEEEeecCCCCCCceecCCCCcHHHhccCC
Confidence 9999999999999999999999999999999999999999999999999997
No 4
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=100.00 E-value=4.8e-57 Score=420.15 Aligned_cols=208 Identities=28% Similarity=0.494 Sum_probs=198.6
Q ss_pred eEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCccee-eeeecCCCCeeEEEEc
Q 020306 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVAS-VEFIDPREPVAVIPIL 195 (328)
Q Consensus 117 ~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~-~~~i~~~~~i~iVsIL 195 (328)
+++++.+||++++++|+|||++|++.+||++++||+++|+|||+++ +|+++.+|+||+|... +..+ ++++|+|+||
T Consensus 34 ~v~~~~~hp~i~~~lt~lRd~~t~~~~Fr~~~~rl~~ll~yEa~~~-lp~~~~~v~TP~g~~~~g~~~--~~~l~~V~IL 110 (243)
T 1bd3_D 34 NVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNE-LPFQKKEVTTPLDVSYHGVSF--YSKICGVSIV 110 (243)
T ss_dssp TEEECCCCHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT-SCEEEEEEECTTSCEEEEEEE--CCCEEEEEEE
T ss_pred cEEEecCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhc-CCceeEEEECCCcceEeeeec--cCcEEEEEEE
Confidence 6788889999999999999999999999999999999999999986 9999999999999654 3334 3689999999
Q ss_pred CcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccE
Q 020306 196 RAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQI 275 (328)
Q Consensus 196 RaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I 275 (328)
|+|++|++++++++|.+++|+|+++||+.+.++++||.++|.+++ +++|||+|||||||+|+.+|++.|+++|+++++|
T Consensus 111 RaG~~m~~~l~~~ip~a~vg~I~~~Rd~~t~~~~~~~~~lp~di~-~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I 189 (243)
T 1bd3_D 111 RAGESMESGLRAVCRGVRIGKILIQRDETTAEPKLIYEKLPADIR-ERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERI 189 (243)
T ss_dssp TTTHHHHHHHHHHSTTCCEEEEEEEECSSSCCEEEEEEECCTTGG-GSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGE
T ss_pred cchHHHHHHHHHhCCcCeeeeEEEEEcCCCCCeEEEeccCCcccC-CCEEEEECCccccHHHHHHHHHHHHHcCCCcceE
Confidence 999999999999999999999999999999999999999999998 8999999999999999999999999999978899
Q ss_pred EEEEEeeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhhhCC
Q 020306 276 KVISAVAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 328 (328)
Q Consensus 276 ~vv~~vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~fGt 328 (328)
.+++++++++|+++|.+.||++.|||++||++|||+|||+|||||||||+|||
T Consensus 190 ~~~~lvaap~g~~~l~~~~p~v~I~ta~ID~~Lne~~yIvPGlGDaGDR~fGt 242 (243)
T 1bd3_D 190 IFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT 242 (243)
T ss_dssp EEEEEEECHHHHHHHHHHCTTSEEEEEEECSEECTTCCEESCCSCHHHHHHTC
T ss_pred EEEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCceecCCCCcHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999997
No 5
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=100.00 E-value=3.8e-57 Score=412.17 Aligned_cols=206 Identities=39% Similarity=0.677 Sum_probs=197.6
Q ss_pred EEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCc
Q 020306 118 LVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRA 197 (328)
Q Consensus 118 ~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRa 197 (328)
.+++++||++++++|+|||++|++.+||++++||+++|+|||+++ +|+++.+|+||.|.+.+..+. ++++|+|+|||+
T Consensus 2 ~v~v~~hp~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~-l~~~~~~v~TP~~~~~g~~~~-g~~l~~V~ILra 79 (208)
T 2ehj_A 2 KIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATAD-LETEKVTIEGWNGPVEIDQIK-GKKITVVPILRA 79 (208)
T ss_dssp EEEECCCHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEEEETTEEEEEEEEC-SSCCEEEEBTTG
T ss_pred CeEEcCCHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCCccEEEEEec-CCceEEEEeecC
Confidence 478999999999999999999999999999999999999999998 999999999999976556665 468999999999
Q ss_pred ChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEE
Q 020306 198 GLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKV 277 (328)
Q Consensus 198 Gl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~v 277 (328)
|++|++++.+.+|.+++|+|+++||+.+.+++.||.++|.+++ +++|+|+|||+|||+|+.+|++.|+++|+ ++|.+
T Consensus 80 G~~~~~~l~~~ip~~~vg~i~~~rd~~t~~~~~~~~~lp~di~-~r~VilvDd~laTG~T~~~ai~~L~~~G~--~~I~~ 156 (208)
T 2ehj_A 80 GLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNID-ERMALIVDPMLATGGSVIATIDLLKKAGC--SSIKV 156 (208)
T ss_dssp GGGGHHHHHHHCTTCEECEEEEEECTTTCCEEEEEEECCSCGG-GCEEEEEEEEESSCHHHHHHHHHHHHTTC--CEEEE
T ss_pred HHHHHHHHHHhCCcCceeEEEEEEcCCCCceEEEecCCCCccC-CCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEE
Confidence 9999999999999999999999999999999999999999998 89999999999999999999999999997 69999
Q ss_pred EEEeeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhhhCC
Q 020306 278 ISAVAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 328 (328)
Q Consensus 278 v~~vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~fGt 328 (328)
++++++++|++++.++||++.|||++||++|||+|||+|||||||||+|||
T Consensus 157 ~~lv~~p~g~~~l~~~~p~v~I~t~~iD~~lne~~yIvPGlGDaGDR~fgt 207 (208)
T 2ehj_A 157 LVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGT 207 (208)
T ss_dssp EEEEECHHHHHHHHHHCTTSEEEESCBCSEECTTSCEESCCSCHHHHHHTC
T ss_pred EEEEeCHHHHHHHHHHCCCcEEEEEecCCCCCCCceecCCCCcHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999997
No 6
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=100.00 E-value=1.6e-56 Score=411.39 Aligned_cols=208 Identities=39% Similarity=0.667 Sum_probs=198.9
Q ss_pred ceEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEc
Q 020306 116 RMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPIL 195 (328)
Q Consensus 116 ~~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsIL 195 (328)
+.++++++||++++++|+|||++|++.+||++++||+++|+|||+++ +|+++.+|+||+|.+.+..+. ++++|+|+||
T Consensus 13 ~~~~~~~~~p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~-lp~~~~~v~TP~g~~~g~~~~-g~~lviV~Il 90 (221)
T 1o5o_A 13 MKNLVVVDHPLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRH-LKCEEVEVETPITKTIGYRIN-DKDIVVVPIL 90 (221)
T ss_dssp CTTEEECCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTT-CCCEEEEEECSSCEEEEEECC-STTEEEEEEE
T ss_pred cceEEecCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCCceEEEEEec-CCeEEEEEEe
Confidence 46789999999999999999999999999999999999999999998 999999999999976555555 4689999999
Q ss_pred CcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccE
Q 020306 196 RAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQI 275 (328)
Q Consensus 196 RaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I 275 (328)
|+|++|++++.+.+|++++|+|+++|++.+.+++.||.++|.+++ +++|||+|||+|||+|+.+|++.|+++|+ ++|
T Consensus 91 rgG~~~~~~l~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~lp~di~-gr~VilvDd~laTG~Tl~~ai~~L~~~G~--~~I 167 (221)
T 1o5o_A 91 RAGLVMADGILELLPNASVGHIGIYRDPETLQAVEYYAKLPPLND-DKEVFLLDPMLATGVSSIKAIEILKENGA--KKI 167 (221)
T ss_dssp TTHHHHHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECCCCCT-TCEEEEECSEESSSHHHHHHHHHHHHTTC--CEE
T ss_pred cchHHHHHHHHHhCCCCcEEEEEEEEcCCCCceeEEEecCCCccC-CCEEEEECCccccHHHHHHHHHHHHHcCC--CEE
Confidence 999999999999999999999999999999999999999999998 89999999999999999999999999997 599
Q ss_pred EEEEEeeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhhhCC
Q 020306 276 KVISAVAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 328 (328)
Q Consensus 276 ~vv~~vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~fGt 328 (328)
.+++++++++|+++|.+.||++.|||++||++|||+|||+|||||||||||||
T Consensus 168 ~~~~lv~~~~g~~~l~~~~p~v~I~t~~ID~~Lne~~yIvPGlGDaGDR~fGt 220 (221)
T 1o5o_A 168 TLVALIAAPEGVEAVEKKYEDVKIYVAALDERLNDHGYIIPGLGDAGDRLFRT 220 (221)
T ss_dssp EEECSEECHHHHHHHHHHCTTCEEEESEECSEECTTSCEESSCSCHHHHHHTC
T ss_pred EEEEEEeCHHHHHHHHHHCCCcEEEEEeccCCCCCCceecCCCCcHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999997
No 7
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=100.00 E-value=8.7e-55 Score=396.62 Aligned_cols=204 Identities=39% Similarity=0.710 Sum_probs=195.4
Q ss_pred EEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcC
Q 020306 119 VFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAG 198 (328)
Q Consensus 119 v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaG 198 (328)
+++++||++++++|+|||++|++.+||++++||+++|+|||+++ +|+++.+|+||.|.+.+..+. ++++|+|+|||+|
T Consensus 2 v~~~~hp~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~-l~~~~~~v~TP~~~~~~~~~~-g~~~~~V~ILraG 79 (208)
T 2e55_A 2 IVELSHPLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKD-ILLEEKEVRTWIGNKRFNYLN-EEEIVFVPILRAG 79 (208)
T ss_dssp EEECCCHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTT-CCCEEEEEEETTEEEEEEECC-GGGEEEEEEETTT
T ss_pred EEecCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCceeEEeCCCCceEeeeec-CCcEEEEEEecch
Confidence 67899999999999999999999999999999999999999998 999999999999976555554 3689999999999
Q ss_pred hHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEE
Q 020306 199 LVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVI 278 (328)
Q Consensus 199 l~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv 278 (328)
++|++++.+.+|.+++|+++++||+.+.++++||.++| +++ +++|+|+|||+|||+|+.+|++.|+++|+ ++|.++
T Consensus 80 ~~~~~~l~~~lp~~~vg~i~~~rd~~t~~~~~~~~~lp-di~-~r~vilvDd~laTG~T~~~ai~~L~~~G~--~~I~~~ 155 (208)
T 2e55_A 80 LSFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLP-ELK-GKIVVILDPMLATGGTLEVALREILKHSP--LKVKSV 155 (208)
T ss_dssp HHHHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECC-CCB-TSEEEEECSEESSSHHHHHHHHHHHTTCB--SEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEEEEecCCCceEEEecCCC-CCC-CCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEEE
Confidence 99999999999999999999999999999999999999 998 89999999999999999999999999997 699999
Q ss_pred EEeeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhhhCC
Q 020306 279 SAVAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 328 (328)
Q Consensus 279 ~~vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~fGt 328 (328)
+++++++|++++.+.||++.|||++||++|||++||+|||||||||+|||
T Consensus 156 ~lv~~~~g~~~l~~~~p~v~I~t~~iD~~l~e~~~I~PglgdagdR~fgt 205 (208)
T 2e55_A 156 HAIAAPEGLKRIEEKFKEVEIFVGNVDERLNDKGYIIPGLGDIGDRLYAV 205 (208)
T ss_dssp EEEECHHHHHHHHHHCTTSEEEEEEECSEECTTSCEESSCSSHHHHHHSC
T ss_pred EEEECHHHHHHHHHHCCCcEEEEEeecCCCCCCceeccCccHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999997
No 8
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=100.00 E-value=6.6e-53 Score=383.64 Aligned_cols=207 Identities=41% Similarity=0.711 Sum_probs=196.8
Q ss_pred eEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcC
Q 020306 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILR 196 (328)
Q Consensus 117 ~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILR 196 (328)
+.+++++||++++++|+|||++|++.+||++++||+++|+|||+++ +|+++.+|+||+|...+..+. ++++|+|+|||
T Consensus 2 ~~v~~~~~p~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~-l~~~~~~V~tPl~~~~~~~~~-~~~~~vV~Ilr 79 (209)
T 1i5e_A 2 GKVYVFDHPLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRD-LPLEEVEIETPVSKARAKVIA-GKKLGVIPILR 79 (209)
T ss_dssp CCEEECCCHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHGGG-CCEEEEEEECSSCEEEEEEEC-CCCEEEEEBTT
T ss_pred CCeEEcCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhc-CCCcceEEecCCceeeeeEec-CCceEEEEEec
Confidence 4588999999999999999999999999999999999999999998 999999999999976555665 46899999999
Q ss_pred cChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEE
Q 020306 197 AGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIK 276 (328)
Q Consensus 197 aGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~ 276 (328)
+|++|++++.+.+|++++++++.+|++.+.++..||.++|.+++ +++|+|+|||++||+|+.+|++.|+++|+ ++|.
T Consensus 80 ~G~~~~~~L~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~-~~~VllvDd~l~TG~T~~~a~~~L~~~G~--~~I~ 156 (209)
T 1i5e_A 80 AGIGMVDGILKLIPAAKVGHIGLYRDPQTLKPVEYYVKLPSDVE-ERDFIIVDPMLATGGSAVAAIDALKKRGA--KSIK 156 (209)
T ss_dssp GGGGGHHHHHHHCTTSEECEEEEECCTTCSSCEEEEEECCTTTT-TSEEEEECSEESSSHHHHHHHHHHHHTTC--CCEE
T ss_pred CChHHHHHHHHhCCCCeEEEEEEEEcCCCCceEEEEEcCCCccC-CCEEEEEcCCCcCHHHHHHHHHHHHHcCC--CEEE
Confidence 99999999999999999999999999888888899999999998 89999999999999999999999999997 5899
Q ss_pred EEEEeeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhhhCC
Q 020306 277 VISAVAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 328 (328)
Q Consensus 277 vv~~vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~fGt 328 (328)
+++++++++|++++.+.||++.|||++||++||+++||+|||||||||+|||
T Consensus 157 ~~~lv~~~~g~~~l~~~~p~~~I~t~~id~~l~~~~~i~Pglgdagdr~fgt 208 (209)
T 1i5e_A 157 FMCLIAAPEGVKAVETAHPDVDIYIAALDERLNDHGYIVPGLGDAGDRLFGT 208 (209)
T ss_dssp EECSEECHHHHHHHHHHCTTCEEEESEECCEECTTCCEESSCSCHHHHHHSC
T ss_pred EEEEEECHHHHHHHHHhCcCcEEEEEEeCCCCCCCceEccCCchHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999997
No 9
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.41 E-value=1.9e-13 Score=131.85 Aligned_cols=174 Identities=17% Similarity=0.163 Sum_probs=130.3
Q ss_pred CceEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEE
Q 020306 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (328)
Q Consensus 115 ~~~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsI 194 (328)
++.+..-+|.+|+++||.+..|.....+.|.+++.+ . ++ . . ++.++|+.
T Consensus 122 drvit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~-----------~-~~---------------~-~---~~~vVVsp 170 (326)
T 3s5j_B 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRE-----------N-IS---------------E-W---RNCTIVSP 170 (326)
T ss_dssp SEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHH-----------H-CT---------------T-G---GGCEEEES
T ss_pred CEEEEEeCCChHHHhhcCCceeceEcHHHHHHHHHH-----------h-cC---------------c-C---CCcEEEEE
Confidence 456777889999999999999988888888777654 1 11 0 1 23568888
Q ss_pred cCcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCccc
Q 020306 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (328)
Q Consensus 195 LRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~ 274 (328)
..+|+.+...+.+.+ +.+...+.-+|+.. .+... ..+.++++ |++|+|||||++||+|+.+|++.|++.|+. +
T Consensus 171 d~Ggv~~A~~lA~~L-~~~~~~i~K~r~~~-~~v~~--~~l~g~v~-gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~--~ 243 (326)
T 3s5j_B 171 DAGGAKRVTSIADRL-NVDFALIHKERKKA-NEVDR--MVLVGDVK-DRVAILVDDMADTCGTICHAADKLLSAGAT--R 243 (326)
T ss_dssp SGGGHHHHHHHHHHH-TCEEEEEEEC--------CC--EEEESCCT-TSEEEEEEEEESSCHHHHHHHHHHHHTTCS--E
T ss_pred CCCchHHHHHHHHHc-CCCEEEEEEEecCC-CeeeE--EeccccCC-CCEEEEEccccCCcHHHHHHHHHHHHcCCC--E
Confidence 999999988887755 35666665555322 12211 23456786 999999999999999999999999999984 6
Q ss_pred EEEEEE--eeChhHHHHHHHhCCCcEEEEeEeCCCCC----CC---CccccCcccHhHhhh
Q 020306 275 IKVISA--VAAPPALQKLSENFHGLHVYTGIIDPTVN----DK---GFIVPGLGDAGDRSF 326 (328)
Q Consensus 275 I~vv~~--vas~~Gi~~L~~~fP~v~IvtaaID~~Ld----e~---gyIvPGLGDaGDR~f 326 (328)
|.+++. +.+.+|+++|.+...+.-++|.+|+..-+ ++ -.|.|-|++++.|++
T Consensus 244 v~~~~tH~v~~~~a~e~l~~~~i~~vv~t~tip~~~~~~~~~k~~~lsva~lla~aI~~i~ 304 (326)
T 3s5j_B 244 VYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTH 304 (326)
T ss_dssp EEEEEEEECCCTTHHHHHHHSCCSEEEEETTSCCHHHHHTCTTEEEECCHHHHHHHHHHHH
T ss_pred EEEEEEecccCchHHHHHhhCCCCEEEEecCCCChhhhccCCCeEEEEcHHHHHHHHHHHH
Confidence 777775 77899999999876688899999975311 11 289999999999976
No 10
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.40 E-value=4.9e-13 Score=128.25 Aligned_cols=171 Identities=17% Similarity=0.235 Sum_probs=123.7
Q ss_pred eEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcC
Q 020306 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILR 196 (328)
Q Consensus 117 ~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILR 196 (328)
....-.|.+|+++++.+..|...+.+.+.+++.+ + + + ++.++|++.+
T Consensus 130 vit~dlH~~q~~~~f~~p~d~l~a~p~l~~~l~~----------r-------------------~-~---~~~vVv~pd~ 176 (317)
T 1dku_A 130 VIALDLHAPQIQGFFDIPIDHLMGVPILGEYFEG----------K-------------------N-L---EDIVIVSPDH 176 (317)
T ss_dssp EEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHT----------T-------------------T-C---CSEEEEESSG
T ss_pred EEEeccCchhhhcccCCCceEEEehHHHHHHHHh----------h-------------------c-C---CCcEEEEeCc
Confidence 4455678899999998777777777766655433 0 1 1 3467899999
Q ss_pred cChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEE
Q 020306 197 AGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIK 276 (328)
Q Consensus 197 aGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~ 276 (328)
+|..+.+.+.+.+. ++...+.-.|...+... ...++++++ |++|+|||||++||+|+.+|.+.|++.|+ ++|.
T Consensus 177 Gg~~~A~~la~~L~-~p~~~l~k~r~~~~~~~---~~~l~~~v~-gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga--~~V~ 249 (317)
T 1dku_A 177 GGVTRARKLADRLK-APIAIIDKRRPRPNVAE---VMNIVGNIE-GKTAILIDDIIDTAGTITLAANALVENGA--KEVY 249 (317)
T ss_dssp GGHHHHHHHHHHTT-CCEEEEECC------------CEEESCCT-TCEEEEECSEESSCHHHHHHHHHHHHTTC--SEEE
T ss_pred chHHHHHHHHHHhC-CCEEEEEEEecccccee---EEEecccCC-CCEEEEEecccCCCHHHHHHHHHHHHcCC--cEEE
Confidence 99999999988774 56655544443322211 123456786 89999999999999999999999999998 4677
Q ss_pred EEE--EeeChhHHHHHHHhCCCcEEEEeEeCCCC---CCC---CccccCcccHhHhhhC
Q 020306 277 VIS--AVAAPPALQKLSENFHGLHVYTGIIDPTV---NDK---GFIVPGLGDAGDRSFG 327 (328)
Q Consensus 277 vv~--~vas~~Gi~~L~~~fP~v~IvtaaID~~L---de~---gyIvPGLGDaGDR~fG 327 (328)
+++ -+.+.++++++.+...+..++|.+|...- .++ -.|.|-|++++.|++.
T Consensus 250 ~~~tH~v~~~~a~~~l~~~~i~~vv~t~tip~~~~~~~~k~~~~~va~~~a~ai~~~~~ 308 (317)
T 1dku_A 250 ACCTHPVLSGPAVERINNSTIKELVVTNSIKLPEEKKIERFKQLSVGPLLAEAIIRVHE 308 (317)
T ss_dssp EECSEECCCTTHHHHHHTSSEEEEEEETTSCC----CCSSEEEECCHHHHHHHHHHHHH
T ss_pred EEEECcccChHHHHHHhhCCCCEEEEeCCcCcchhhcCCCeEEEEhHHHHHHHHHHHhc
Confidence 777 36677899999877668889999996531 112 2899999999999863
No 11
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.37 E-value=5.9e-13 Score=128.04 Aligned_cols=173 Identities=16% Similarity=0.166 Sum_probs=122.6
Q ss_pred CceEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEE
Q 020306 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (328)
Q Consensus 115 ~~~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsI 194 (328)
++.+..-+|.+|++++|.+..|+....+.|.+++.+. . + ++.++|+.
T Consensus 127 d~vit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~----------~--------------------~---~~~vVVsp 173 (319)
T 3dah_A 127 ERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQ----------N--------------------Y---PDLLVVSP 173 (319)
T ss_dssp CEEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHHTT----------C--------------------C---TTEEEECC
T ss_pred CEEEEEECCChHHhhhcCCceEecccHHHHHHHHHHh----------C--------------------C---CCcEEEEe
Confidence 4567778899999999999999888888877776541 0 1 24668888
Q ss_pred cCcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCccc
Q 020306 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (328)
Q Consensus 195 LRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~ 274 (328)
..+|+.+...+.+.+ +.+...+.-+|+... +.. -..++++++ |++|+|||||++||+|+.+|++.|++.|+. .
T Consensus 174 d~Ggv~~A~~lA~~L-~~p~~~i~K~r~~~~-~v~--~~~i~g~v~-gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~--~ 246 (319)
T 3dah_A 174 DVGGVVRARALAKQL-NCDLAIIDKRRPKAN-VAE--VMNIIGEVE-GRTCVIMDDMVDTAGTLCKAAQVLKERGAK--Q 246 (319)
T ss_dssp SSTTHHHHHHHHHHT-TCEEEC-----------------------C-CSEEEEEEEEESSCHHHHHHHHHHHHTTCS--C
T ss_pred CCCccHHHHHHHHHh-CCCEEEEEEEeccCC-ceE--EEEccccCC-CCEEEEEecccCchHHHHHHHHHHHHcCCC--E
Confidence 899999888887766 355555555553211 111 134567887 999999999999999999999999999984 6
Q ss_pred EEEEEE--eeChhHHHHHHHhCCCcEEEEeEeCCCCC----C---CCccccCcccHhHhhhC
Q 020306 275 IKVISA--VAAPPALQKLSENFHGLHVYTGIIDPTVN----D---KGFIVPGLGDAGDRSFG 327 (328)
Q Consensus 275 I~vv~~--vas~~Gi~~L~~~fP~v~IvtaaID~~Ld----e---~gyIvPGLGDaGDR~fG 327 (328)
|.+++. +.+.+|+++|.+...+.-++|.+|+..-. + .-.|.|-|++++.|++.
T Consensus 247 v~~~~tH~v~s~~a~~~l~~~~i~~vv~t~tip~~~~~~~~~k~~~lsva~lla~aI~~i~~ 308 (319)
T 3dah_A 247 VFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAETFSRIRR 308 (319)
T ss_dssp EEEEEEEECCCTTHHHHHHTSSCSEEEEESSSCCCHHHHHCTTEEEECCHHHHHHHHHHHHH
T ss_pred EEEEEEeecCChHHHHHHHhCCCCEEEEeccccCchhhccCCCeEEEEcHHHHHHHHHHHhC
Confidence 777775 67899999998776688899999976311 1 12889999999999763
No 12
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.26 E-value=6.9e-12 Score=123.08 Aligned_cols=177 Identities=16% Similarity=0.155 Sum_probs=121.2
Q ss_pred CceEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEE
Q 020306 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (328)
Q Consensus 115 ~~~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsI 194 (328)
++.+..-+|.+|++++|.+..|+....+.+.+++.+ . ++ . . ++.++|++
T Consensus 150 d~vit~DlHs~q~qgfF~ipvD~l~A~p~La~~I~~-----------~-~~---------------~-~---~~~vVV~p 198 (379)
T 2ji4_A 150 THLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQE-----------E-IP---------------D-Y---RNAVIVAK 198 (379)
T ss_dssp CEEEEESCSSGGGGGGSSSCEEEECCHHHHHHHHHH-----------H-ST---------------T-G---GGEEEEES
T ss_pred CEEEEecCCChhhccccCCceeeeccHHHHHHHHHH-----------h-cc---------------c-C---CCcEEEEE
Confidence 345667789999999999999987777777666543 1 11 0 0 23457777
Q ss_pred cCcChHHHHHHhccCCCCeeEEEEEeecCC-------cc-cc-------------------ee-eecCCCCCCCCCCEEE
Q 020306 195 LRAGLVLVEHASSILPAIKTYHLGISRDEE-------TL-QP-------------------SI-YLNKLPEKFPEGSRIF 246 (328)
Q Consensus 195 LRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~-------t~-e~-------------------~~-yy~kLP~dI~~g~~Vl 246 (328)
.++|+.+...+.+.+ +++...+..+|... .. .+ .. .-..++++++ |++||
T Consensus 199 d~GGv~~A~~lA~~L-~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~~~~~~~l~g~v~-Gk~vi 276 (379)
T 2ji4_A 199 SPASAKRAQSFAERL-RLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVG-GRIAI 276 (379)
T ss_dssp SGGGHHHHHHHHHHT-TCEEEEEC-----------------------------------------CCCEESCCT-TSEEE
T ss_pred ccchHHHHHHHHHHh-CCCEEEEEEEeecccccccccccCCcccccccccccccchhhhhhhcccccccccCCC-CCEEE
Confidence 777777777776655 24444443333210 00 00 00 0113456776 99999
Q ss_pred EEcCcccchHHHHHHHHHHHHcCCCcccEEEEEE--eeChhHHHHHHHhCCCcEEEEeEeCCCC----CCC---CccccC
Q 020306 247 VVDPMLATGGTVVAALNLVKECGVENKQIKVISA--VAAPPALQKLSENFHGLHVYTGIIDPTV----NDK---GFIVPG 317 (328)
Q Consensus 247 LvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~--vas~~Gi~~L~~~fP~v~IvtaaID~~L----de~---gyIvPG 317 (328)
|||||++||+|+.+|++.|+++|+. .|.++++ +.+.++.++|.+...+.-++|.++...- .++ -.|.|-
T Consensus 277 iVDDii~TG~Tl~~a~~~L~~~Ga~--~v~~~~tH~v~s~~a~~~l~~s~id~vvvTntip~~~~~~~~~k~~~~sva~l 354 (379)
T 2ji4_A 277 IVDDIIDDVDSFLAAAETLKERGAY--KIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMI 354 (379)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCC--EEEEEEEEECCCTTHHHHHHHSSCCEEEEESSSCCHHHHHTCTTEEEECCHHH
T ss_pred EEecCCCchHHHHHHHHHHHhcCCC--EEEEEEEeecCCcHHHHHHHhCCCCEEEEecCCCCchhhcccCCcEEEEhHHH
Confidence 9999999999999999999999984 6777774 7899999999876568889999996531 111 288999
Q ss_pred cccHhHhhh
Q 020306 318 LGDAGDRSF 326 (328)
Q Consensus 318 LGDaGDR~f 326 (328)
|++++.|++
T Consensus 355 laeaI~ri~ 363 (379)
T 2ji4_A 355 LSEAIRRIH 363 (379)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999976
No 13
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.26 E-value=1.9e-11 Score=115.87 Aligned_cols=167 Identities=13% Similarity=0.132 Sum_probs=123.6
Q ss_pred CceEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEE
Q 020306 115 DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPI 194 (328)
Q Consensus 115 ~~~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsI 194 (328)
++.+..-+|.+|++++|.+..|.......|.+++.+ . ++.++|++
T Consensus 116 d~vit~DlH~~~iq~ff~~pvd~l~~~~~la~~i~~--------------------------------~---~~~vVV~p 160 (286)
T 3lrt_A 116 NSIATVDIHDEKTLSYSKVKFSDLHANDAIVRYYKN--------------------------------V---DVDYVVSP 160 (286)
T ss_dssp SEEEEESCSCGGGGGGCSSEEEEECCHHHHHHHHTT--------------------------------S---CCSEEEES
T ss_pred CeEEEecCChHHHhhhcCCcEEEeecHHHHHHHHHh--------------------------------c---CCCEEEEE
Confidence 456777889999999999999987777766655432 0 12457888
Q ss_pred cCcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCccc
Q 020306 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (328)
Q Consensus 195 LRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~ 274 (328)
..+|+.+...+.+.+ +.+...+.-+|.. +.+.+. ..+..+++ |++|+||||+++||+|+.++++.|++.|+. .
T Consensus 161 d~Gg~~~A~~lA~~L-~~p~~~i~K~r~~-~g~v~i--~~~~~dv~-gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~--~ 233 (286)
T 3lrt_A 161 DDGGLARVADISAKL-GKKHFFIEKKRID-DRTVEM--KVPNVDVN-GKKLLIVDDIISTGGTIAKSSGLLREKGAS--K 233 (286)
T ss_dssp SSSSHHHHHHHHHHH-TCEEEEEEEEEET-TEEEEE--EESCCCCT-TCEEEEEEEEESSCHHHHHHHHHHHHTTCS--E
T ss_pred CCCccHHHHHHHHHh-CCCeEEEeeeecC-CCcEEE--eeccccCC-cCEEEEEeccccccHHHHHHHHHHHhCCCC--E
Confidence 999999988887755 3555555555532 222221 23445676 999999999999999999999999999985 5
Q ss_pred EEEEEE--eeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccHhHhh
Q 020306 275 IKVISA--VAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDAGDRS 325 (328)
Q Consensus 275 I~vv~~--vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDaGDR~ 325 (328)
+.++++ +.+.+|.++| +.--+.-++|.+|+..+ +.-.|.|-|++++.|+
T Consensus 234 v~~~~th~v~s~~a~~~l-~s~i~~vv~Tntip~~~-~~~sva~lla~ai~~i 284 (286)
T 3lrt_A 234 IYVSAVHGLFVNGSENKI-LQNADEIHVTDTVESKF-SDISVYQEVCNYIRDI 284 (286)
T ss_dssp EEEEEEEECCCTTHHHHH-TTTCSEEEEESSSCSTT-EEECCHHHHHHHHHHC
T ss_pred EEEEEEEeecCchHHHHH-HcCCCEEEEecCCCCCc-eEEEhHHHHHHHHHHh
Confidence 666655 6789999999 65336678899987653 3347889999998875
No 14
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.26 E-value=1.1e-10 Score=104.04 Aligned_cols=119 Identities=14% Similarity=0.203 Sum_probs=90.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCCC-CeeEEEE
Q 020306 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHLG 218 (328)
Q Consensus 140 ~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP~-a~~g~I~ 218 (328)
+..+|+..+++|++.+.++ ++ +++.++|+++++|+.|+..+.+.+.- .+++++.
T Consensus 14 ~~~~i~~~i~~La~~I~~~-----~~--------------------~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~ 68 (186)
T 3o7m_A 14 SEEQLQEKVKELALQIERD-----FE--------------------GEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFIS 68 (186)
T ss_dssp CHHHHHHHHHHHHHHHHHH-----TT--------------------TSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHH-----cC--------------------CCCCEEEEECcchHHHHHHHHHHhCCCCceEEEE
Confidence 3788999999988877643 11 13467999999999999999887753 4577776
Q ss_pred E--eecC--CcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHH
Q 020306 219 I--SRDE--ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPAL 287 (328)
Q Consensus 219 i--~Rd~--~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi 287 (328)
. |++. .+.+. .+...++.+++ |++||||||+++||+|+.++++.|++.|+ +.|.+++++..+++.
T Consensus 69 ~~~Y~~~~~~~~~v-~i~~~~~~~~~-gk~VliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~ 137 (186)
T 3o7m_A 69 ASSYGNQTETTGKV-KLLKDIDVNIT-GKNVIVVEDIIDSGLTLHFLKDHFFMHKP--KALKFCTLLDKPERR 137 (186)
T ss_dssp EEECC-------CE-EEEECCCSCCT-TSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGC
T ss_pred EEEecCCCcccCcE-EEEecCCCCCC-cCEEEEEcCeeCCcHHHHHHHHHHHhcCC--cEEEEEEEEECCCCC
Confidence 5 4442 12233 33456777786 89999999999999999999999999997 578999999988874
No 15
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.25 E-value=1.5e-10 Score=104.75 Aligned_cols=119 Identities=14% Similarity=0.243 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCCC-CeeEEEEE
Q 020306 141 CPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHLGI 219 (328)
Q Consensus 141 ~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP~-a~~g~I~i 219 (328)
..+|+..+++|++.+.++ ++ .++.++|+++++|+.++..+.+.+.- .+.+++..
T Consensus 37 ~~~i~~~i~~LA~~I~~~-----~~--------------------~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~ 91 (204)
T 3hvu_A 37 EEQIQEKVLELGAIIAED-----YK--------------------NTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAV 91 (204)
T ss_dssp HHHHHHHHHHHHHHHHHH-----TS--------------------SSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH-----cC--------------------CCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEE
Confidence 889999999998877643 10 12357999999999999999887653 45777765
Q ss_pred --eecC-CcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHH
Q 020306 220 --SRDE-ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPAL 287 (328)
Q Consensus 220 --~Rd~-~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi 287 (328)
|+++ .+.....+...++.+++ |++||||||+++||+|+.++++.|++.|+ +.|.+++++..+++.
T Consensus 92 ~~Y~~~~~~~~~v~i~~~l~~~~~-gk~VliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~ 159 (204)
T 3hvu_A 92 SSYGHSTVSTGEVKILKDLDTSVE-GRDILIVEDIIDSGLTLSYLVDLFKYRKA--KSVKIVTLLDKPTGR 159 (204)
T ss_dssp EECSGGGTTSCCEEEEECCSSCCT-TCEEEEEEEEESSCHHHHHHHHHHHHTTC--SEEEEEEEEECGGGC
T ss_pred EEecCCCccCCcEEEEcCCCccCC-CCEEEEEeceeCchHHHHHHHHHHHHcCC--CEEEEEEEEECCCCC
Confidence 4442 22122233456777787 89999999999999999999999999997 578899999888764
No 16
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.23 E-value=1.7e-10 Score=102.09 Aligned_cols=121 Identities=16% Similarity=0.266 Sum_probs=88.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCCC-CeeEE
Q 020306 138 QTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYH 216 (328)
Q Consensus 138 ~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP~-a~~g~ 216 (328)
.-+..+++..+++|+..+.++ +. .++.++|+++++|+.+...+.+.+.- ..+++
T Consensus 13 li~~~~i~~~i~~La~~I~~~-----~~--------------------~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~ 67 (181)
T 2ywu_A 13 QISAEAIKKRVEELGGEIARD-----YQ--------------------GKTPHLICVLNGAFIFMADLVRAIPLPLTMDF 67 (181)
T ss_dssp CBCHHHHHHHHHHHHHHHHHH-----TT--------------------TCCCEEEEEETTTHHHHHHHHTTCCSCCEEEE
T ss_pred EECHHHHHHHHHHHHHHHHHH-----cC--------------------CCCCEEEEECchhHHHHHHHHHHcCCCceEEE
Confidence 445788899999988776533 10 12467999999999999999887752 45677
Q ss_pred EEE--eecCC--cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHH
Q 020306 217 LGI--SRDEE--TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPAL 287 (328)
Q Consensus 217 I~i--~Rd~~--t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi 287 (328)
+.. |+++. +.+.. +...++.+++ |++||||||+++||+|+.++++.|++.|+ +.|.+++++..+++.
T Consensus 68 i~~~~y~~~~~~~~~v~-i~~~~~~~~~-gk~vliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~ 138 (181)
T 2ywu_A 68 IAISSYGNAFKSSGEVE-LLKDLRLPIH-GRDVIVVEDIVDTGLTLSYLLDYLEARKP--ASVRVAALLSKPSRR 138 (181)
T ss_dssp EEEC------------C-EEECCCSCCT-TCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEECGGGC
T ss_pred EEEEEecCCccccCcEE-EEecCCCCCC-CCEEEEECCeeCChHHHHHHHHHHHhcCC--cEEEEEEEEECCCCc
Confidence 764 44332 22222 2346677787 89999999999999999999999999997 579999999888763
No 17
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.22 E-value=1.6e-10 Score=101.91 Aligned_cols=118 Identities=14% Similarity=0.256 Sum_probs=87.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCC-eeEEEEcCcChHHHHHHhccCCC-CeeEEE
Q 020306 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREP-VAVIPILRAGLVLVEHASSILPA-IKTYHL 217 (328)
Q Consensus 140 ~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~-i~iVsILRaGl~m~~~lr~~lP~-a~~g~I 217 (328)
+..+|+..+++|+..+.++ .+ ..+ .++|+++++|+.+...+.+.+.- .+++++
T Consensus 10 s~~~i~~~i~~La~~I~~~-----~~--------------------~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i 64 (177)
T 3ohp_A 10 SEQEVAQRIRELGQQITEH-----YQ--------------------GSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFM 64 (177)
T ss_dssp CHHHHHHHHHHHHHHHHHH-----TT--------------------TCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHH-----cC--------------------CCCCeEEEEECcchHHHHHHHHHHcCCCceEEEE
Confidence 3677888888888776543 10 122 67999999999999999887753 457777
Q ss_pred EE--eecCC--cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhH
Q 020306 218 GI--SRDEE--TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPA 286 (328)
Q Consensus 218 ~i--~Rd~~--t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~G 286 (328)
.. |+++. +.+.. +...++.++. |++||||||+++||+|+.++++.|++.|+ +.|.+++++..+++
T Consensus 65 ~~~~y~~~~~~~~~v~-i~~~~~~~~~-gk~vliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~~~~~ 133 (177)
T 3ohp_A 65 TASSYGNSMQSSRDVR-ILKDLDDDIK-GKDVLLVEDIIDTGNTLNKVKEILALREP--KSIRICTLLDKPTR 133 (177)
T ss_dssp EECC--------CCCC-EEECCSSCCT-TSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGG
T ss_pred EEEEEcCCCccCCcEE-EecCCCcccC-CCEEEEEeeEeCcHHHHHHHHHHHHhcCC--cEEEEEEEEECCcc
Confidence 64 45532 22232 3456777787 89999999999999999999999999997 47888988888876
No 18
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.22 E-value=1.3e-11 Score=116.46 Aligned_cols=163 Identities=23% Similarity=0.229 Sum_probs=109.3
Q ss_pred ceEEEeCCchhHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEc
Q 020306 116 RMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPIL 195 (328)
Q Consensus 116 ~~~v~v~~~P~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsIL 195 (328)
..+..-.|.+++++++.+..|.......+.+++.+ + . ++.+++++.
T Consensus 118 ~vit~dlH~~~~~~~f~~p~d~l~a~~~La~~i~~-----------~--------------------~---~~~vVv~pd 163 (284)
T 1u9y_A 118 KLITINPHETHIKDFFTIPFIYGDAVPKLAEYVKD-----------K--------------------L---NDPIVLAPD 163 (284)
T ss_dssp EEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHTT-----------T--------------------C---SSCEEEESS
T ss_pred EEEEecCCChHHHHHhCCchhHhhHHHHHHHHHHh-----------c--------------------C---CCcEEEEEc
Confidence 34455668889999999888876555444333221 1 1 235688889
Q ss_pred CcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCC-CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCccc
Q 020306 196 RAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPE-KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQ 274 (328)
Q Consensus 196 RaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~-dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~ 274 (328)
++|+.+...+.+.+ +.+...+..+|...+ + ...++++ +++ |++|+|||||++||+|+.++.+.|++.|+. .
T Consensus 164 ~Gg~~~a~~la~~l-~~p~~~i~k~r~~~~-~---~~~~l~g~~v~-Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~--~ 235 (284)
T 1u9y_A 164 KGALEFAKTASKIL-NAEYDYLEKTRLSPT-E---IQIAPKTLDAK-DRDVFIVDDIISTGGTMATAVKLLKEQGAK--K 235 (284)
T ss_dssp GGGHHHHHHHHHHH-TCCEEEBC--------------CCBSSCCCT-TCCEEEEEEECSSSHHHHHHHHHHHHTTCC--S
T ss_pred CChHHHHHHHHHHh-CCCEEEEEEEEcCCC-e---EEEEecCccCC-CCEEEEEecccCchHHHHHHHHHHHHCCCc--E
Confidence 99999988887654 344444444443222 1 1234554 776 899999999999999999999999999984 6
Q ss_pred EEEEEE--eeChhHHHHHHHhCCCcEEEEeEeCCCCCCCCccccCcccH
Q 020306 275 IKVISA--VAAPPALQKLSENFHGLHVYTGIIDPTVNDKGFIVPGLGDA 321 (328)
Q Consensus 275 I~vv~~--vas~~Gi~~L~~~fP~v~IvtaaID~~Lde~gyIvPGLGDa 321 (328)
|.++++ +.+.+|.++|.+..-+.-++|.+++.++. .-.|.|-|+++
T Consensus 236 V~~~~~h~v~s~~a~~~l~~~~i~~vv~t~ti~~~~~-~~~va~~~a~a 283 (284)
T 1u9y_A 236 IIAACVHPVLIGDALNKLYSAGVEEVVGTDTYLSEVS-KVSVAEVIVDL 283 (284)
T ss_dssp EEEEEEECCCCTTHHHHHHHHTCSEEEEETTSCCTTE-EECCHHHHHTT
T ss_pred EEEEEEeEecCcHHHHHHHhCCCCEEEEeCCCCcCcE-EEEhHHHHHhh
Confidence 777776 88999999998874466788888766321 22455555544
No 19
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.18 E-value=9.3e-11 Score=109.25 Aligned_cols=128 Identities=13% Similarity=0.174 Sum_probs=94.3
Q ss_pred HHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhc
Q 020306 128 KHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASS 207 (328)
Q Consensus 128 ~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~ 207 (328)
+.+..++-+ ..+|++.+++|++.+.++. + +++.++|+|+++|+.|...+.+
T Consensus 57 ~di~~vli~----~~~I~~~i~~LA~~I~~~~-~------------------------~~~~vVVgIl~gG~~fa~~La~ 107 (250)
T 3ozf_A 57 KYLTKVLVP----NGVIKNRIEKLAYDIKKVY-N------------------------NEEFHILCLLKGSRGFFTALLK 107 (250)
T ss_dssp GGEEEEEEC----HHHHHHHHHHHHHHHHHHH-T------------------------TCCEEEEEEETTTHHHHHHHHH
T ss_pred ccCeEEEEC----HHHHHHHHHHHHHHHHHHc-C------------------------CCCCEEEEECcchHHHHHHHHH
Confidence 344455555 8899999999988876542 1 1246799999999999887765
Q ss_pred cCC-------------CCeeEEEEE--eecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCc
Q 020306 208 ILP-------------AIKTYHLGI--SRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVEN 272 (328)
Q Consensus 208 ~lP-------------~a~~g~I~i--~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~ 272 (328)
.+. ..+++++.. |+++.+.....+...++.+++ |++||||||+++||+|+.++++.|++.|+
T Consensus 108 ~L~~~~v~~~rk~gklP~~v~fI~~ssY~~~~s~g~v~i~~~~~~~~~-gk~VlIVDDii~TG~Tl~~~~~~L~~~g~-- 184 (250)
T 3ozf_A 108 HLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLK-GKHVLIVEDIIDTGKTLVKFCEYLKKFEI-- 184 (250)
T ss_dssp HHHHHHHHHCCTTCCCCEEEEEEEEEEEETTEEEEEEEEECCCGGGGT-TCEEEEEEEEESSSHHHHHHHHHHGGGCC--
T ss_pred HhccccccccccccCCCceEEEEEEEEecCCcccCcEEEEcCCccccC-CCEEEEEeceeCchHHHHHHHHHHHhcCC--
Confidence 432 256777654 455433222233466677776 89999999999999999999999999997
Q ss_pred ccEEEEEEeeChhHH
Q 020306 273 KQIKVISAVAAPPAL 287 (328)
Q Consensus 273 ~~I~vv~~vas~~Gi 287 (328)
+.|.+++++..+++.
T Consensus 185 ~~v~va~l~~k~~~r 199 (250)
T 3ozf_A 185 KTVAIACLFIKRTPL 199 (250)
T ss_dssp SEEEEEEEEEECCTT
T ss_pred CEEEEEEEEECCccc
Confidence 578889988877763
No 20
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.16 E-value=2.9e-10 Score=100.21 Aligned_cols=148 Identities=12% Similarity=0.169 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCCC-CeeEEEEE
Q 020306 141 CPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHLGI 219 (328)
Q Consensus 141 ~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP~-a~~g~I~i 219 (328)
..++...+.+|+..+..+ +. .+..++|++.++|+.+...+.+.+.- ...+.+..
T Consensus 19 ~~~i~~~~~~La~~i~~~-----~~--------------------~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~ 73 (185)
T 2geb_A 19 EEQLKAKVKELGEMITRD-----YE--------------------GKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAV 73 (185)
T ss_dssp HHHHHHHHHHHHHHHHHH-----TT--------------------TSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH-----cC--------------------CCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEE
Confidence 677888888877665422 10 12356899999999999999887643 34566643
Q ss_pred --eecCC--cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCC
Q 020306 220 --SRDEE--TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFH 295 (328)
Q Consensus 220 --~Rd~~--t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP 295 (328)
+++.. +.+... ...++.+++ |++||||||+++||+|+.++++.|++.|+ +.|.+++++..+++.+ +. ..|
T Consensus 74 ~~y~~~~~~~~~~~~-~~~~~~~~~-gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~-~~-~~~ 147 (185)
T 2geb_A 74 SSYGSSTKSSGIVKI-IKDHDIDIE-GKDVLIVEDIIDSGLTLAYLRETLLGRKP--RSLKICTILDKPERRE-AD-VKV 147 (185)
T ss_dssp EECSTTHHHHCCEEE-EECCCSCCT-TSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGCC-SC-CCC
T ss_pred EecCCCCccCccEEE-eccCCCCCC-CCEEEEECCccCCHHHHHHHHHHHHhcCC--CEEEEEEEEECCCccc-CC-CCC
Confidence 44321 223333 345666786 89999999999999999999999999997 5788999998888742 21 123
Q ss_pred CcEEEEeEeCCC--------CCCCCccccCcccH
Q 020306 296 GLHVYTGIIDPT--------VNDKGFIVPGLGDA 321 (328)
Q Consensus 296 ~v~IvtaaID~~--------Lde~gyIvPGLGDa 321 (328)
..+.-.+++. .++...-.|++|..
T Consensus 148 --d~~g~~~p~~f~vgyg~d~~~~~r~lp~i~~~ 179 (185)
T 2geb_A 148 --DYCGFKIPDKFVVGYGIDYAEKYRNLPFIGVL 179 (185)
T ss_dssp --SEEEEECCSCCEEBTTBCBTTBSTTCSSEEEE
T ss_pred --CEEEEEcCCCcEEEcCcccccccCCCCceEEe
Confidence 3445455431 23444456766654
No 21
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.12 E-value=1.7e-10 Score=105.05 Aligned_cols=122 Identities=18% Similarity=0.274 Sum_probs=82.5
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCC------
Q 020306 137 EQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILP------ 210 (328)
Q Consensus 137 ~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP------ 210 (328)
...+..++...+.+|++.|..+. . .++.++|+++++|+.+...+.+.+.
T Consensus 42 ~l~~~~~i~~~~~~La~~i~~~~--~-----------------------~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~ 96 (225)
T 2jbh_A 42 VLIPHGIIVDRIERLAKDIMKDI--G-----------------------YSDIMVLCVLKGGYKFXADLVEHLKNISRNS 96 (225)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHH--T-----------------------TSCEEEEEEETTTHHHHHHHHHHHHHHHHHS
T ss_pred EEECHHHHHHHHHHHHHHHHHHc--C-----------------------CCCCEEEEEcCCCEehhHHHHHHhhhhcccc
Confidence 34457788888888877665331 0 1235789999999999888766442
Q ss_pred ----CCeeEEEEE--eecCC-cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeC
Q 020306 211 ----AIKTYHLGI--SRDEE-TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAA 283 (328)
Q Consensus 211 ----~a~~g~I~i--~Rd~~-t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas 283 (328)
....+.+.. |+++. +.+..+.....+.+++ |++||||||+++||+|+.++++.|+++|+ +.|.+++++..
T Consensus 97 ~~~~p~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~v~-Gk~VllVDDii~TG~Tl~~a~~~L~~~ga--~~V~va~l~~k 173 (225)
T 2jbh_A 97 DRFVSMKVDFIRLKSYRNDQSMGEMQIIGGDDLSTLA-GKNVLIVEDVVGTGRTMKALLSNIEKYKP--NMIKVASLLVK 173 (225)
T ss_dssp SCCCCEEEEEEEEC----------CCEESSSCGGGGT-TSEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEE
T ss_pred ccCCCceEEEEEEEeccCccccccEEEecCCCccccC-CCEEEEEccccCcHHHHHHHHHHHHhcCC--CEEEEEEEEEC
Confidence 245666653 33322 2222222222335676 89999999999999999999999999997 57888888887
Q ss_pred hhH
Q 020306 284 PPA 286 (328)
Q Consensus 284 ~~G 286 (328)
+++
T Consensus 174 ~~~ 176 (225)
T 2jbh_A 174 RTS 176 (225)
T ss_dssp CC-
T ss_pred Ccc
Confidence 776
No 22
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.10 E-value=1.5e-10 Score=105.08 Aligned_cols=140 Identities=16% Similarity=0.204 Sum_probs=88.2
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCC---
Q 020306 134 LRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILP--- 210 (328)
Q Consensus 134 LRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP--- 210 (328)
+.+...+...|+..+++|++.|..+. . .+..++++++++|+++...+.+.+.
T Consensus 31 i~~il~~~~~~~~~~~~La~~i~~~~-~------------------------~~~~vVvgi~~GG~~~a~~la~~L~~~~ 85 (217)
T 1z7g_A 31 LERVFIPHGLIMDRTERLARDVMKEM-G------------------------GHHIVALCVLKGGYKFFADLLDYIKALN 85 (217)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHH-T------------------------TSCEEEEEECSSCCHHHHHHHHHHHHHH
T ss_pred cceEEECHHHHHHHHHHHHHHHHHHc-C------------------------CCCCEEEEECCCCHHHHHHHHHHhCCcc
Confidence 33345568999999999888776331 0 1235689999999999887765443
Q ss_pred -------CCeeEEEEE--eecCC-cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEE
Q 020306 211 -------AIKTYHLGI--SRDEE-TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA 280 (328)
Q Consensus 211 -------~a~~g~I~i--~Rd~~-t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~ 280 (328)
....+.+.. |+++. +.+........+.+++ |++||||||+++||+|+.++++.|++.|+ +.|.++++
T Consensus 86 ~i~~g~~~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~-gk~VliVDDii~TG~Tl~~~~~~L~~~g~--~~v~~~~l 162 (217)
T 1z7g_A 86 RNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLT-GKNVLIVEDIIDTGKTMQTLLSLVRQYNP--KMVKVASL 162 (217)
T ss_dssp TTCSSCCCEEEEEECBC----------CCBCCSSCGGGGT-TSEEEEEEEECCCHHHHHHHHHHHHTTCC--SEEEEEEE
T ss_pred ccCCCceEeeeeeEEEEEecccccccceEEecCCCccccC-CCEEEEEeceeCcHHHHHHHHHHHHhcCC--CEEEEEEE
Confidence 133555542 33322 2222211112234566 89999999999999999999999999997 47888888
Q ss_pred eeChhHHHHHHHhCCCcEEEEeEeC
Q 020306 281 VAAPPALQKLSENFHGLHVYTGIID 305 (328)
Q Consensus 281 vas~~Gi~~L~~~fP~v~IvtaaID 305 (328)
+..+++ ++....|+ .++..++
T Consensus 163 ~~k~~~--~~~~~~~d--yvg~~~p 183 (217)
T 1z7g_A 163 LVKRTP--RSVGYKPD--FVGFEIP 183 (217)
T ss_dssp EEECC-------CCCS--EEEEEEC
T ss_pred EECccc--ccCCCCCc--EEEEEcC
Confidence 887776 33333333 4444443
No 23
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.09 E-value=6.5e-10 Score=97.56 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=88.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCCC-CeeEEEE
Q 020306 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHLG 218 (328)
Q Consensus 140 ~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP~-a~~g~I~ 218 (328)
+..++...+.+|+..+..+. . .+..+++++.++|+.+...+.+.+.- ...+.+.
T Consensus 16 ~~~~i~~~~~~la~~i~~~~-~------------------------~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~ 70 (183)
T 1hgx_A 16 NQDDIQKRIRELAAELTEFY-E------------------------DKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYII 70 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-T------------------------TTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHc-C------------------------CCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEE
Confidence 37788888888877664321 0 02356899999999999999886642 2344443
Q ss_pred E--eecCC-cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCC
Q 020306 219 I--SRDEE-TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFH 295 (328)
Q Consensus 219 i--~Rd~~-t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP 295 (328)
+ |+.+. +.+.. +...++.+++ |++||||||+++||+|+.++++.|++.|+ +.|.+++++..++|.+++.. .|
T Consensus 71 ~~~y~~~~~~~~~~-~~~~~~~~~~-gk~VllVDDvi~TG~Tl~~a~~~L~~~ga--~~v~~~~l~~~~~g~~~~~~-~~ 145 (183)
T 1hgx_A 71 CSSYSGTKSTGNLT-ISKDLKTNIE-GRHVLVVEDIIDTGLTMYQLLNNLQMRKP--ASLKVCTLCDKDIGKKAYDV-PI 145 (183)
T ss_dssp EEC---------CE-EEECCSSCCT-TSEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECCSSCSSCC-CC
T ss_pred EEecCCcccccceE-EeecCCCCCC-CCEEEEECCccCCHHHHHHHHHHHHhcCC--CEEEEEEEEecCcccccCCC-CC
Confidence 3 21111 12222 2235566776 89999999999999999999999999997 47888887777665543322 23
Q ss_pred CcEEEEeEeCC
Q 020306 296 GLHVYTGIIDP 306 (328)
Q Consensus 296 ~v~IvtaaID~ 306 (328)
..+.-.+++
T Consensus 146 --d~~g~~~p~ 154 (183)
T 1hgx_A 146 --DYCGFVVEN 154 (183)
T ss_dssp --SEEEEEECS
T ss_pred --CEEEEEeCC
Confidence 455555544
No 24
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.05 E-value=5.6e-10 Score=100.83 Aligned_cols=125 Identities=11% Similarity=0.186 Sum_probs=84.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccC---CC-Cee
Q 020306 139 TPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSIL---PA-IKT 214 (328)
Q Consensus 139 T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~l---P~-a~~ 214 (328)
.+...|...+++|++.+..+. +++. + .. .+..+++++.++|+.+...+.+.+ .- .+.
T Consensus 28 ~~~~~i~~~~~~La~~i~~~~-~~~~---------~------~~---~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~ 88 (211)
T 1pzm_A 28 VTQEQVWAATAKCAKKIAADY-KDFH---------L------TA---DNPLYLLCVLKGSFIFTADLARFLADEGVPVKV 88 (211)
T ss_dssp ECHHHHHHHHHHHHHHHHHHH-GGGT---------C------BT---TBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEE
T ss_pred eCHHHHHHHHHHHHHHHHHhc-cccc---------c------cC---CCCCEEEEEccchHHHHHHHHHHHhhcCCCcee
Confidence 347888999999888776432 1100 0 00 123679999999999988887666 32 335
Q ss_pred EEEEE--eecC--CcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhH
Q 020306 215 YHLGI--SRDE--ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPA 286 (328)
Q Consensus 215 g~I~i--~Rd~--~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~G 286 (328)
+.+.. +++. .+.+... ...++.+++ |++||||||+++||+|+.++++.|+++|+ +.|.+++++..+++
T Consensus 89 ~~i~~~~y~~~~~~~~~~~~-~~~~~~~v~-gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga--~~V~v~~l~~k~~~ 160 (211)
T 1pzm_A 89 EFICASSYGSGVETSGQVRM-LLDVRDSVE-NRHIMLVEDIVDSAITLQYLMRFMLAKKP--ASLKTVVLLDKPSG 160 (211)
T ss_dssp EEEBCC-------------C-CBCCSSCCT-TCEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGG
T ss_pred eeEEeeeccCccccCCceEE-eccCCCCCC-CCEEEEECCccccHHHHHHHHHHHHhcCC--CEEEEEEEEecCcc
Confidence 55543 3321 1222222 234566776 89999999999999999999999999997 57889998888877
No 25
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.02 E-value=2.1e-09 Score=96.27 Aligned_cols=68 Identities=26% Similarity=0.369 Sum_probs=58.0
Q ss_pred CCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCCCcEEEEeEeCCC
Q 020306 234 KLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFHGLHVYTGIIDPT 307 (328)
Q Consensus 234 kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP~v~IvtaaID~~ 307 (328)
..+.++. |++||||||+++||+|+.++++.|++.|+ +.|.+++.+..+++.+++.+. . .+++..+.+.
T Consensus 113 ~~~~~~~-gk~VllVDDvi~TG~Tl~~a~~~L~~~ga--~~V~v~~~v~~~~~~~~l~~~--~-~~v~~~~~~~ 180 (208)
T 1wd5_A 113 RPKAARK-GRDVVLVDDGVATGASMEAALSVVFQEGP--RRVVVAVPVASPEAVERLKAR--A-EVVALSVPQD 180 (208)
T ss_dssp SCCCCCT-TSEEEEECSCBSSCHHHHHHHHHHHTTCC--SEEEEEEEEBCHHHHHHHHTT--S-EEEEEECCTT
T ss_pred CCCCCCC-CCEEEEECCCccHHHHHHHHHHHHHHcCC--CEEEEEEEEcCHHHHHHhccc--C-cEEEEecCcc
Confidence 3455676 89999999999999999999999999997 579999999999999998765 3 7777777654
No 26
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.01 E-value=1.8e-09 Score=98.93 Aligned_cols=121 Identities=14% Similarity=0.169 Sum_probs=84.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCC-------
Q 020306 138 QTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILP------- 210 (328)
Q Consensus 138 ~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP------- 210 (328)
..+...+...+++|++.+..+. . .+..++++++++|+.+...+.+.+.
T Consensus 49 l~~~~~i~~~~~~La~~i~~~~--~-----------------------~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~ 103 (233)
T 1fsg_A 49 LLPGGLVKDRVEKLAYDIHRTY--F-----------------------GEELHIICILKGSRGFFNLLIDYLATIQKYSG 103 (233)
T ss_dssp EECHHHHHHHHHHHHHHHHHHH--T-----------------------TSCEEEEEEETTTHHHHHHHHHHHHHHHHHCS
T ss_pred eeCHHHHHHHHHHHHHHHHHHc--C-----------------------CCCCEEEEEccCCHHHHHHHHHHhCCcccccc
Confidence 3457888888888887765331 0 1235689999999998877765432
Q ss_pred ------CCeeEEEEE--eecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEee
Q 020306 211 ------AIKTYHLGI--SRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVA 282 (328)
Q Consensus 211 ------~a~~g~I~i--~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~va 282 (328)
...++.+.. |+++.+.....+....+.+++ |++||||||+++||+|+.++++.|+++|+ +.|.+++++.
T Consensus 104 ~k~~~~P~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~-Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga--~~V~vavl~~ 180 (233)
T 1fsg_A 104 RESSVPPFFEHYVRLKSYQNDNSTGQLTVLSDDLSIFR-DKHVLIVEDIVDTGFTLTEFGERLKAVGP--KSMRIATLVE 180 (233)
T ss_dssp SCCSSCSCEEEEEEEEEEETTEEEEEEEEECSCGGGGT-TCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEE
T ss_pred cccCCCCcEEEEEEEEeccCccccccEEEecCCccccC-CCEEEEEccccCcHHHHHHHHHHHHhcCC--CEEEEEEEEE
Confidence 134666553 343222111222233345676 89999999999999999999999999997 5788888887
Q ss_pred ChhH
Q 020306 283 APPA 286 (328)
Q Consensus 283 s~~G 286 (328)
.+++
T Consensus 181 k~~~ 184 (233)
T 1fsg_A 181 KRTD 184 (233)
T ss_dssp ECCT
T ss_pred CCcc
Confidence 7776
No 27
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.00 E-value=4.8e-09 Score=95.51 Aligned_cols=124 Identities=10% Similarity=0.167 Sum_probs=85.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCC-eeEEEEcCcChHHHHHHhccC---CC-Cee
Q 020306 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREP-VAVIPILRAGLVLVEHASSIL---PA-IKT 214 (328)
Q Consensus 140 ~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~-i~iVsILRaGl~m~~~lr~~l---P~-a~~ 214 (328)
+...+...+++|++.|..+. ++ - .... .++ .++|+++++|+.+...+.+.+ .- ...
T Consensus 13 ~~~~i~~~~~~La~~I~~~~-~~-~----------------~~~~-~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~ 73 (220)
T 1tc1_A 13 TEEEIRTRIKEVAKRIADDY-KG-K----------------GLRP-YVNPLVLISVLKGSFMFTADLCRALCDFNVPVRM 73 (220)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-TT-S----------------CCBT-TTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHc-cC-c----------------cccc-CCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccc
Confidence 37778888888888776432 11 0 0000 023 579999999999988887655 32 245
Q ss_pred EEEEEe--ecC--CcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhH
Q 020306 215 YHLGIS--RDE--ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPA 286 (328)
Q Consensus 215 g~I~i~--Rd~--~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~G 286 (328)
+.+... ++. .+.+... ...++.++. |++||||||+++||+|+.++++.|++.|+ +.|.+++++..+++
T Consensus 74 ~~l~~~~y~~~~~~~~~v~~-~~~~~~~v~-Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga--~~V~v~~l~~k~~~ 145 (220)
T 1tc1_A 74 EFICVSSYGEGLTSSGQVRM-LLDTRHSIE-GHHVLIVEDIVDTALTLNYLYHMYFTRRP--ASLKTVVLLDKREG 145 (220)
T ss_dssp EEEEEECC---------CEE-EECCSSCCT-TSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECTTC
T ss_pred cEEEEeecCCCcccCCcEEE-ecCCCccCC-CCEEEEEeCccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 666532 221 1223333 345666787 89999999999999999999999999997 57889998888877
No 28
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=98.95 E-value=4e-09 Score=94.28 Aligned_cols=150 Identities=12% Similarity=0.171 Sum_probs=99.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCCC-CeeEEE
Q 020306 139 TPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHL 217 (328)
Q Consensus 139 T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP~-a~~g~I 217 (328)
-+..++...+.+++..+..+ +. .+..++|++.++|+.+...+.+.+.- ...+.+
T Consensus 37 ~~~~~i~~~~~~La~~i~~~-----~~--------------------~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~ 91 (205)
T 1yfz_A 37 ITEEQLKAKVKELGEMITRD-----YE--------------------GKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFL 91 (205)
T ss_dssp ECHHHHHHHHHHHHHHHHHH-----TT--------------------TSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHH-----cC--------------------CCCCEEEEECcCCHHHHHHHHHHhCCCceeEEE
Confidence 34777888888877665422 10 12356899999999999999887642 244555
Q ss_pred EE--eecCC--cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHh
Q 020306 218 GI--SRDEE--TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSEN 293 (328)
Q Consensus 218 ~i--~Rd~~--t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~ 293 (328)
.. ++++. +.+... ...++.+++ |++||||||+++||+|+.++++.|++.|+ +.|.+++++..+++.+ + ..
T Consensus 92 ~~~~y~~~~~~~~~~~~-~~~~~~~~~-gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~-~-~~ 165 (205)
T 1yfz_A 92 AVSSYGSSTKSSGIVKI-IKDHDIDIE-GKDVLIVEDIIDSGLTLAYLRETLLGRKP--RSLKICTILDKPERRE-A-DV 165 (205)
T ss_dssp EEEECSHHHHHHCCEEE-EECCCSCCT-TSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGCC-S-CC
T ss_pred EEEeccCCccccceEEE-eccCCCCCC-cCEEEEECCccCcHHHHHHHHHHHHhcCC--CEEEEEEEEecCcccc-C-CC
Confidence 43 33211 222332 345666776 89999999999999999999999999997 5789999998888742 2 12
Q ss_pred CCCcEEEEeEeCCC--------CCCCCccccCcccH
Q 020306 294 FHGLHVYTGIIDPT--------VNDKGFIVPGLGDA 321 (328)
Q Consensus 294 fP~v~IvtaaID~~--------Lde~gyIvPGLGDa 321 (328)
.| ..+...+++. .++...-.|++|..
T Consensus 166 ~~--d~~g~~~p~~f~vgyg~d~~~~~r~lp~i~~~ 199 (205)
T 1yfz_A 166 KV--DYCGFKIPDKFVVGYGLDYAEKYRNLPFIGVL 199 (205)
T ss_dssp CC--SEEEEECCSSCCBBTTBCBTTBSTTCSSEEEE
T ss_pred CC--CEEEEEcCCccEEECCcchhhcccCCCceEEe
Confidence 23 4555556542 23444456776654
No 29
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=98.95 E-value=1.3e-08 Score=90.22 Aligned_cols=118 Identities=16% Similarity=0.283 Sum_probs=85.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCCC-CeeEEEE
Q 020306 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPA-IKTYHLG 218 (328)
Q Consensus 140 ~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP~-a~~g~I~ 218 (328)
+..+.++.++||+..+.+. . . +++++++.|+++|+.|+..+.+.+.. ..+.++.
T Consensus 15 s~~~I~~~i~rlA~eI~e~-----~-------------------~-~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~ 69 (181)
T 3acd_A 15 SAEAIKKRVEELGGEIARD-----Y-------------------Q-GKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIA 69 (181)
T ss_dssp CHHHHHHHHHHHHHHHHHH-----T-------------------T-TCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHH-----h-------------------C-CCCcEEEEEecCcHHHHHHHHHhcCCCccccceE
Confidence 4677888888888776543 1 1 13477999999999999998776532 4666666
Q ss_pred Eeec--C-CcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChh
Q 020306 219 ISRD--E-ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPP 285 (328)
Q Consensus 219 i~Rd--~-~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~ 285 (328)
+.+. . .+.........++.+++ |++||||||++.||.|+.++++.|+++|+ ++|.+++++.-+.
T Consensus 70 ~ssy~~~~~~~g~~~~~~~~~~~i~-gk~VllVDDIldTG~Tl~~~~~~l~~~~p--~sv~~avLl~K~~ 136 (181)
T 3acd_A 70 ISSYGNAFKSSGEVELLKDLRLPIH-GRDVIVVEDIVDTGLTLSYLLDYLEARKP--ASVRVAALLSKPS 136 (181)
T ss_dssp EC------------CEEECCCSCCT-TCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEECGG
T ss_pred EEEecCCcCCCCceEeccCCCcccC-CCeeEEEEEEEcCchhHHHHHHHHhcCCC--CEEEEEEEEEcCc
Confidence 6443 2 12122333456777887 89999999999999999999999999986 5888888887554
No 30
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=98.94 E-value=4.7e-09 Score=88.91 Aligned_cols=93 Identities=24% Similarity=0.337 Sum_probs=66.8
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEE--eecCCc-cc-ceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGI--SRDEET-LQ-PSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLV 265 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i--~Rd~~t-~e-~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L 265 (328)
+++++.++|+.+...+.+.+.-...+.+.. +++..+ .+ .. +...++.+++ |++|+||||+++||+|+.++++.|
T Consensus 29 ~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-gk~VllVDDvitTG~Tl~~a~~~L 106 (153)
T 1vdm_A 29 VIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDERGEKPV-ITIPIHGDLK-DKRVVIVDDVSDTGKTLEVVIEEV 106 (153)
T ss_dssp EEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CCCSSCE-EEECCCSCCB-TCEEEEEEEEESSCHHHHHHHHHH
T ss_pred EEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCccccccee-EeccCCcCCC-CCEEEEEecccCChHHHHHHHHHH
Confidence 578999999999999887664323333332 222111 11 22 3344555676 899999999999999999999999
Q ss_pred HHcCCCcccEEEEEEeeChhH
Q 020306 266 KECGVENKQIKVISAVAAPPA 286 (328)
Q Consensus 266 ~~~Ga~~~~I~vv~~vas~~G 286 (328)
++.|+ +.|.++++...+.+
T Consensus 107 ~~~ga--~~v~~~~l~~~~~~ 125 (153)
T 1vdm_A 107 KKLGA--KEIKIACLAMKPWT 125 (153)
T ss_dssp HTTTB--SEEEEEEEEECTTC
T ss_pred HHcCC--CEEEEEEEEeCCCC
Confidence 99997 47888888877765
No 31
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=98.93 E-value=3.5e-09 Score=94.92 Aligned_cols=125 Identities=16% Similarity=0.270 Sum_probs=82.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCC-----CCee
Q 020306 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILP-----AIKT 214 (328)
Q Consensus 140 ~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP-----~a~~ 214 (328)
+...|.+.+++|+..+.++. .+.. |.+ ... ++.++|++.++|+.+...+.+.+. ..+.
T Consensus 18 ~~~~i~~~i~~La~~i~~~~-~~~~---------~~~----~~~---~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~ 80 (201)
T 1w30_A 18 SAANVGRTISRIAHQIIEKT-ALDD---------PVG----PDA---PRVVLLGIPTRGVTLANRLAGNITEYSGIHVGH 80 (201)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TTTS---------CCB----TTB---CCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEE
T ss_pred CHHHHHHHHHHHHHHHHHHc-cccc---------ccc----ccC---CCcEEEEEcccHHHHHHHHHHHHhHHHCCCccc
Confidence 37789999999988876542 1100 101 001 346799999999999888866542 1345
Q ss_pred EEEEE--eecCCcc--cceeeecCCCCC-CCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CCcccEEEEEEeeCh
Q 020306 215 YHLGI--SRDEETL--QPSIYLNKLPEK-FPEGSRIFVVDPMLATGGTVVAALNLVKECG-VENKQIKVISAVAAP 284 (328)
Q Consensus 215 g~I~i--~Rd~~t~--e~~~yy~kLP~d-I~~g~~VlLvDd~LATGgTl~aai~~L~~~G-a~~~~I~vv~~vas~ 284 (328)
+.+.. ++++.+. +....+..++.. +. |++||||||+++||+|+.++++.|++.| + +.|.+++++...
T Consensus 81 ~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~-gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a--~~V~vavlv~k~ 153 (201)
T 1w30_A 81 GALDITLYRDDLMIKPPRPLASTSIPAGGID-DALVILVDDVLYSGRSVRSALDALRDVGRP--RAVQLAVLVDRG 153 (201)
T ss_dssp EECCCGGGCC--------CCCCCBCCTTCST-TCEEEEEEEEESSSHHHHHHHHHHHHHCCC--SEEEEEEEEECC
T ss_pred ceEEEEEecCCccccccceeecccCCCccCC-CCEEEEECCccchHHHHHHHHHHHHhCCCC--cEEEEEEEEecC
Confidence 55443 4443221 112233455544 65 8999999999999999999999999999 7 477777777653
No 32
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.92 E-value=1.1e-08 Score=89.40 Aligned_cols=138 Identities=21% Similarity=0.309 Sum_probs=85.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCC-----CCee
Q 020306 140 PCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILP-----AIKT 214 (328)
Q Consensus 140 ~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP-----~a~~ 214 (328)
+...|...+.+++..+.... .+ . ++.++|++.+.|+.+...+.+.+. ....
T Consensus 9 ~~~~i~~~~~~La~~i~~~~-~~--------------------~---~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~ 64 (181)
T 1ufr_A 9 NAPEMRRALYRIAHEIVEAN-KG--------------------T---EGLALVGIHTRGIPLAHRIARFIAEFEGKEVPV 64 (181)
T ss_dssp EHHHHHHHHHHHHHHHHHHH-TS--------------------S---TTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCE
T ss_pred CHHHHHHHHHHHHHHHHHHc-CC--------------------C---CCeEEEEECCCChHHHHHHHHHHhHHhCCCccc
Confidence 36677788888776654221 10 1 246789999999999887765432 2334
Q ss_pred EEEEE--eecCCcc--c-ceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CCcccEEEEEEeeChhHHH
Q 020306 215 YHLGI--SRDEETL--Q-PSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECG-VENKQIKVISAVAAPPALQ 288 (328)
Q Consensus 215 g~I~i--~Rd~~t~--e-~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~G-a~~~~I~vv~~vas~~Gi~ 288 (328)
+.+.. ++++.+. . .......++.++. |++||||||+++||+|+.++++.|++.| + +.|.+++++..+ +
T Consensus 65 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gk~VllVDDvitTG~Tl~~a~~~L~~~G~a--~~V~~~~l~~~~-~-- 138 (181)
T 1ufr_A 65 GVLDITLYRDDLTEIGYRPQVRETRIPFDLT-GKAIVLVDDVLYTGRTARAALDALIDLGRP--RRIYLAVLVDRG-H-- 138 (181)
T ss_dssp EEEEEEC-----------CEEEEEEECSCCT-TCEEEEEEEEESSSHHHHHHHHHHHHHCCC--SEEEEEEEEECC-C--
T ss_pred CeEEEEEecCccccccccceecccccCcCCC-CCEEEEEecCCCcHHHHHHHHHHHHhcCCC--cEEEEEEEEcCC-C--
Confidence 55443 3332111 1 1111233566776 8999999999999999999999999999 6 467777777654 1
Q ss_pred HHHHhCC-CcEEEEeEeCCCCCC
Q 020306 289 KLSENFH-GLHVYTGIIDPTVND 310 (328)
Q Consensus 289 ~L~~~fP-~v~IvtaaID~~Lde 310 (328)
+..| ....+...++...+|
T Consensus 139 ---~~~~~~~d~~g~~i~~~~~~ 158 (181)
T 1ufr_A 139 ---RELPIRADFVGKNVPTSRSE 158 (181)
T ss_dssp ---CSSSBCCSEEEEECCCCTTC
T ss_pred ---CcCCccCcEEEEeCCCCccC
Confidence 1222 233555566665444
No 33
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=98.90 E-value=4.3e-10 Score=101.05 Aligned_cols=117 Identities=15% Similarity=0.252 Sum_probs=78.5
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCC-cccceeeecCCCC-CCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEE-TLQPSIYLNKLPE-KFPEGSRIFVVDPMLATGGTVVAALNLVKE 267 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~-t~e~~~yy~kLP~-dI~~g~~VlLvDd~LATGgTl~aai~~L~~ 267 (328)
+++++..+|+.+...+.+.+. .+... +.+... .... ..+.+ .++ |++|+||||+++||+|+.++++.|++
T Consensus 71 ~vv~v~~~g~~~a~~la~~l~-~p~~~--~rk~~~~~g~~----~~i~g~~~~-gk~VliVDDvitTG~Tl~~a~~~L~~ 142 (211)
T 2aee_A 71 VIAGTATAGIPHGAIIADKMT-LPFAY--IRSKPKDHGAG----NQIEGRVLK-GQKMVIIEDLISTGGSVLDAAAAASR 142 (211)
T ss_dssp EEEEETTTTHHHHHHHHHHHT-CCEEE--ECSSCC----C----CSEESCCCT-TCEEEEEEEEESSCHHHHHHHHHHHH
T ss_pred EEEEeccCcHHHHHHHHHHhC-CCEEE--EEeecCCcCCc----ceecCCCCC-cCEEEEEeecccchHHHHHHHHHHHH
Confidence 578888999998887766442 33322 222111 1110 01112 344 89999999999999999999999999
Q ss_pred cCCCcccEEEEEEee--ChhHHHHHHHh-CCCcEEEEe-EeCCCCCCCCcccc
Q 020306 268 CGVENKQIKVISAVA--APPALQKLSEN-FHGLHVYTG-IIDPTVNDKGFIVP 316 (328)
Q Consensus 268 ~Ga~~~~I~vv~~va--s~~Gi~~L~~~-fP~v~Ivta-aID~~Lde~gyIvP 316 (328)
.|+. .+.+++++. +++|.+++.+. +|.+.+++. .+++.+++++||.+
T Consensus 143 ~Ga~--~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~i~~~l~~~~~i~~ 193 (211)
T 2aee_A 143 EGAD--VLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITN 193 (211)
T ss_dssp TTCE--EEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHHHHHHHHHHTSSCH
T ss_pred CCCc--EEEEEEEEecccccHHHHHHhCCCCEEEEeeHHHHHHHHHHcCCCCH
Confidence 9984 555555544 67999999765 555555554 56777778888764
No 34
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=98.87 E-value=9.8e-09 Score=89.51 Aligned_cols=117 Identities=18% Similarity=0.305 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHHhccCC-----CCeeE
Q 020306 141 CPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILP-----AIKTY 215 (328)
Q Consensus 141 ~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~lr~~lP-----~a~~g 215 (328)
...+...+.+|+..+... .. . . +..+++++.++|+.+...+.+.+. ....+
T Consensus 10 ~~~i~~~~~~la~~i~~~-----~~---------------~-~---~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~ 65 (181)
T 1a3c_A 10 EQAIRRALTRIAHEMIER-----NK---------------G-M---NNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVG 65 (181)
T ss_dssp HHHHHHHHHHHHHHHHHH-----CC-----------------------CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHh-----cC---------------C-C---CCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccC
Confidence 667777777777666422 10 0 0 234689999999999887766442 14456
Q ss_pred EEEE--eecCCcc---c--ceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CCcccEEEEEEeeCh
Q 020306 216 HLGI--SRDEETL---Q--PSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECG-VENKQIKVISAVAAP 284 (328)
Q Consensus 216 ~I~i--~Rd~~t~---e--~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~G-a~~~~I~vv~~vas~ 284 (328)
++.. +++..+. . .......++.++. |++||||||+++||+|+.++++.|++.| + +.|.+++++..+
T Consensus 66 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gk~VllVDDvitTG~Tl~~a~~~L~~~G~a--~~V~~~~l~~k~ 139 (181)
T 1a3c_A 66 EIDITLYRDDLSKKTSNDEPLVKGADIPVDIT-DQKVILVDDVLYTGRTVRAGMDALVDVGRP--SSIQLAVLVDRG 139 (181)
T ss_dssp EEEEECCC--------CCCCEEEEEECSSCCT-TSEEEEEEEEESSSHHHHHHHHHHHHHCCC--SEEEEEEEEECC
T ss_pred eEEEEEecCcccccCccceeeecccccCcCCC-CCEEEEEeCccCcHHHHHHHHHHHHhcCCC--cEEEEEEEEccC
Confidence 6554 3322111 1 2222334566776 8999999999999999999999999997 7 467777777544
No 35
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=98.62 E-value=2.7e-07 Score=80.76 Aligned_cols=101 Identities=21% Similarity=0.218 Sum_probs=68.6
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCC-c-ccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEE-T-LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKE 267 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~-t-~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~ 267 (328)
+++++.+.|+.+...+.+.+. .+.. +.|... + .+.. .+.++++ |++|+||||+++||+|+.++++.|++
T Consensus 61 ~iv~v~~~G~~~a~~la~~l~-~p~~---~~r~~~~~~g~~~----~i~~~~~-gk~VllVDDvitTG~Tl~~~~~~L~~ 131 (178)
T 2yzk_A 61 AVIGVATGGLPWAAMLALRLS-KPLG---YVRPERKGHGTLS----QVEGDPP-KGRVVVVDDVATTGTSIAKSIEVLRS 131 (178)
T ss_dssp EEEEETTTTHHHHHHHHHHHT-CCEE---EECCCCTTSCCCC----CCBTCCC-SSEEEEEEEEESSSHHHHHHHHHHHH
T ss_pred EEEEecccchHHHHHHHHHHC-CCEE---EEEccccccCccc----eecccCC-CCEEEEEEeccCCcHHHHHHHHHHHH
Confidence 478888999999888876442 3332 233221 1 1111 1224675 99999999999999999999999999
Q ss_pred cCCCcccEEEEEEeeC-hhHHHHHHHhCCCcEEEEeE
Q 020306 268 CGVENKQIKVISAVAA-PPALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 268 ~Ga~~~~I~vv~~vas-~~Gi~~L~~~fP~v~Ivtaa 303 (328)
.|+. .+.+++++.- .+|.+++.+. ++++++..
T Consensus 132 ~Ga~--~v~~~~l~~r~~~~~~~l~~~--g~~~~sl~ 164 (178)
T 2yzk_A 132 NGYT--VGTALVLVDRGEGAGELLARM--GVRLVSVA 164 (178)
T ss_dssp TTCE--EEEEEEEEECCSSHHHHHHTT--TCEEEEEE
T ss_pred cCCe--EEEEEEEEEcCcCHHHHHHHc--CCcEEEEe
Confidence 9973 5666666553 3667777653 56776653
No 36
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=98.59 E-value=1.7e-07 Score=85.21 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=66.4
Q ss_pred eeEEEEcCcChHHHHHHhccC-----CCCeeEEEE--EeecCCc--------cccee--eecC---CCCCCCCCCEEEEE
Q 020306 189 VAVIPILRAGLVLVEHASSIL-----PAIKTYHLG--ISRDEET--------LQPSI--YLNK---LPEKFPEGSRIFVV 248 (328)
Q Consensus 189 i~iVsILRaGl~m~~~lr~~l-----P~a~~g~I~--i~Rd~~t--------~e~~~--yy~k---LP~dI~~g~~VlLv 248 (328)
.++|.|+++|+.+...+.+.+ |..+++++. .|++..+ ..... .+.. ++.++. |++||||
T Consensus 31 ~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~-Gk~VLIV 109 (221)
T 2xbu_A 31 DLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGSEVEEVGVKVSRTQWIDYEQCKLDLV-GKNVLIV 109 (221)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC-------------CEEEEEECCCHHHHTCCCT-TCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccccccccccCceeeeeeeeecccccccCC-CCEEEEE
Confidence 468999999999988887654 234677655 3443221 11111 1121 356786 9999999
Q ss_pred cCcccchHHHHHHHHHHHH--------cCCC-------cccEEEEEEeeChh
Q 020306 249 DPMLATGGTVVAALNLVKE--------CGVE-------NKQIKVISAVAAPP 285 (328)
Q Consensus 249 Dd~LATGgTl~aai~~L~~--------~Ga~-------~~~I~vv~~vas~~ 285 (328)
||+++||+|+.+|++.|++ +|+. +.+|.+++++.-+.
T Consensus 110 DDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 110 DEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp EEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred eccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 9999999999999999997 7864 46788888876443
No 37
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=98.54 E-value=7.7e-08 Score=88.40 Aligned_cols=125 Identities=13% Similarity=0.150 Sum_probs=84.9
Q ss_pred hHHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHhccCCCCcceeeecCCcceeeeeecCCCCeeEEEEcCcChHHHHHH
Q 020306 126 LIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHA 205 (328)
Q Consensus 126 ~i~~lltiLRD~~T~~~~Fr~~i~rL~rlL~eEal~~~Lp~~~~~V~TP~G~~~~~~i~~~~~i~iVsILRaGl~m~~~l 205 (328)
|++++..++-+ ..++...+.+|+..+.+. .++ . .++.++|.++++|+.++..+
T Consensus 27 qi~~~~~vlis----~~~I~~~i~~LA~~I~~~-~~~--------------------~--~~~~vvVgi~~Gg~~~a~~L 79 (230)
T 1dqn_A 27 SEVKKFHLLAT----FEECKALAADTARRMNEY-YKD--------------------V--AEPVTLVALLTGAYLYASLL 79 (230)
T ss_dssp GGGGGCEEEEC----HHHHHHHHHHHHHHHHHH-HTT--------------------C--SSCEEEEEETTTHHHHHHHH
T ss_pred HhhccccEecC----HHHHHHHHHHHHHHHHHH-hcC--------------------C--CCCcEEEEECCCCHHHHHHH
Confidence 56666666655 677788888888776532 111 0 03467999999999999999
Q ss_pred hccCCC-CeeEEEEE--eecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEee
Q 020306 206 SSILPA-IKTYHLGI--SRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVA 282 (328)
Q Consensus 206 r~~lP~-a~~g~I~i--~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~va 282 (328)
.+.+.- ..++++.. |++..+..+..+...++.+++ |++||||||+++||.|+.++++.|++ |.+++++.
T Consensus 80 a~~L~~p~~v~~i~vs~y~~~~s~~v~i~~~~l~~~v~-Gk~VLIVDDIidTG~Tl~~a~~~L~~-------V~vavLl~ 151 (230)
T 1dqn_A 80 TVHLTFPYTLHFVKVSSYKGTRQESVVFDEEDLKQLKE-KREVVLIDEYVDSGHTIFSIQEQIKH-------AKICSCFV 151 (230)
T ss_dssp HTTCCSCEEEEEECCEEEECSSCEEEECCHHHHHHHHH-CSSEEEEEEEESSSHHHHHHHHHSTT-------CEEEEEEE
T ss_pred HHHhCCCceEEEEEEEEeCCCccCceEEEeccCccCCC-CCEEEEEeeEcChHHHHHHHHHHhhc-------CEEEEEEE
Confidence 886632 23444333 343322222221234455677 89999999999999999999999987 66777777
Q ss_pred Chh
Q 020306 283 APP 285 (328)
Q Consensus 283 s~~ 285 (328)
.+.
T Consensus 152 k~~ 154 (230)
T 1dqn_A 152 KDV 154 (230)
T ss_dssp SCH
T ss_pred CCc
Confidence 665
No 38
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=98.54 E-value=2.8e-07 Score=81.23 Aligned_cols=59 Identities=31% Similarity=0.512 Sum_probs=46.7
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeCh--hHHHHHHHhCCCcEEEEeE
Q 020306 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAP--PALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~--~Gi~~L~~~fP~v~Ivtaa 303 (328)
+|++||||||+++||+|+.++++.|++.|+. .|.+++++... +|.++|.+. ++++++..
T Consensus 125 ~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~--~V~~~~l~~~~~~~~~~~l~~~--g~~v~sl~ 185 (190)
T 2dy0_A 125 PGDKVLVVDDLLATGGTIEATVKLIRRLGGE--VADAAFIINLFDLGGEQRLEKQ--GITSYSLV 185 (190)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCE--EEEEEEEEEEGGGCHHHHHHTT--TCEEEEEE
T ss_pred CcCEEEEEEccccchHHHHHHHHHHHHcCCE--EEEEEEEEEccCcchHHHHhhC--CCcEEEEE
Confidence 4899999999999999999999999999984 56666655443 588888653 56766553
No 39
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=98.54 E-value=2.1e-07 Score=85.72 Aligned_cols=103 Identities=17% Similarity=0.313 Sum_probs=63.1
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEee-cCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISR-DEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~R-d~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~ 268 (328)
+++++..+|+++...+.+.+ +.+..++...+ +..+.. .+-+.+.+|++||||||+++||+|+.+++++|++.
T Consensus 91 ~Ivg~~~gGi~~a~~lA~~L-~~p~~~vrk~~k~~G~~~------~i~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~ 163 (234)
T 3m3h_A 91 VIAGTATAGIAHAAWVSDRM-DLPMCYVRSKAKGHGKGN------QIEGKAEKGQKVVVVEDLISTGGSAITCVEALREA 163 (234)
T ss_dssp EEEEC---CHHHHHHHHHHH-TCCEEEEC---------C------CEESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred EEEEeccchHHHHHHHHHHc-CCCEEEEEEeeccCCcce------EEecccCCCCEEEEEecccchhHHHHHHHHHHHHC
Confidence 46777888988877766543 22322221110 111110 11123445999999999999999999999999999
Q ss_pred CCCcccEEEEEEee--ChhHHHHHHHhCCCcEEEEeE
Q 020306 269 GVENKQIKVISAVA--APPALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 269 Ga~~~~I~vv~~va--s~~Gi~~L~~~fP~v~Ivtaa 303 (328)
|+.. +.+++++. ...|.+++.+. ++++++..
T Consensus 164 Ga~v--v~v~~l~~~~~~~~~e~l~~~--gi~v~sL~ 196 (234)
T 3m3h_A 164 GCEV--LGIVSIFTYELEAGKEKLEAA--NVASYSLS 196 (234)
T ss_dssp TCEE--EEEEEEEECCCHHHHHHHHHT--TCCEEESS
T ss_pred CCEE--EEEEEEEECcCchHHHHHHhc--CCCEEEEe
Confidence 9853 44555544 46788888765 67776653
No 40
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=98.53 E-value=3e-07 Score=84.26 Aligned_cols=70 Identities=26% Similarity=0.517 Sum_probs=50.9
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeCh--hHHHHHHH----hCCCcEEEEeEeCCCCC
Q 020306 238 KFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAP--PALQKLSE----NFHGLHVYTGIIDPTVN 309 (328)
Q Consensus 238 dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~--~Gi~~L~~----~fP~v~IvtaaID~~Ld 309 (328)
.+.+|++||||||+++||+|+.++++.|++.|+. .+.+++++.-. .|.+++.+ .+.++++++...-+.++
T Consensus 134 ~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~--~v~v~~l~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~~ 209 (236)
T 1qb7_A 134 SIGKGSRVVLIDDVLATGGTALSGLQLVEASDAV--VVEMVSILSIPFLKAAEKIHSTANSRYKDIKFISLLSDDALT 209 (236)
T ss_dssp SSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCE--EEEEEEEEECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGCC
T ss_pred CCCCcCEEEEEecccccHHHHHHHHHHHHHcCCe--EEEEEEEEEcccccHHHHHhhhcccccCCCcEEEEEEccccc
Confidence 3435899999999999999999999999999984 45555555444 68888875 23456666654433333
No 41
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=98.53 E-value=4.2e-07 Score=84.16 Aligned_cols=102 Identities=14% Similarity=0.271 Sum_probs=66.8
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCC--cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEE--TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKE 267 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~--t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~ 267 (328)
+++++..+|+++...+.+.+. .+... -|.+. ..+.. .+-+.+.+|++||||||+++||+|+.+++++|++
T Consensus 103 vIvg~~~gGi~~A~~lA~~L~-~p~~~---vrk~~k~~G~~~----~ieg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~ 174 (243)
T 3dez_A 103 VIAGTATAGIPHGAIIADKMN-LPLAY---IRSKPKDHGAGN----QIEGRVTKGQKMVIIEDLISTGGSVLDAVAAAQR 174 (243)
T ss_dssp EEEEETTTTHHHHHHHHHHTT-CCEEE---ECSSCC-----C----CEESCCCTTCEEEEEEEEESSSHHHHHHHHHHHH
T ss_pred EEEEecCchHHHHHHHHHHcC-CCEEE---EEEeeccCCcee----EEEeccCCCCEEEEEEeeccccHHHHHHHHHHHH
Confidence 478888999999887766442 33222 22211 11110 1112333599999999999999999999999999
Q ss_pred cCCCcccEEEEEEee--ChhHHHHHHHhCCCcEEEEeE
Q 020306 268 CGVENKQIKVISAVA--APPALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 268 ~Ga~~~~I~vv~~va--s~~Gi~~L~~~fP~v~Ivtaa 303 (328)
.|+. .+.+++++. ...|.+++.+. ++++++..
T Consensus 175 ~Ga~--vv~v~~l~d~~~~~a~e~l~~~--gi~~~sL~ 208 (243)
T 3dez_A 175 EGAD--VLGVVAIFTYELPKATANFEKA--SVKLVTLS 208 (243)
T ss_dssp TTCE--EEEEEEEEECCCHHHHHHHHHH--TCCEEESS
T ss_pred CCCE--EEEEEEEEECCCchHHHHHHhc--CCCEEEEe
Confidence 9985 344555544 46788888765 56665543
No 42
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=98.53 E-value=4.5e-07 Score=78.96 Aligned_cols=96 Identities=23% Similarity=0.279 Sum_probs=60.6
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCCcc-----------c-ceeeecCCCCCCCCCCEEEEEcCcccchHH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETL-----------Q-PSIYLNKLPEKFPEGSRIFVVDPMLATGGT 257 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~-----------e-~~~yy~kLP~dI~~g~~VlLvDd~LATGgT 257 (328)
+++++.+.|+.+...+.+.+. .+... +.+..... + ...+... .+.+.+|++|+||||+++||+|
T Consensus 60 ~vv~v~~~G~~~a~~la~~l~-~p~~~--~r~~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~gk~VllVDDvitTG~T 135 (180)
T 1zn8_A 60 YIAGLDSRGFLFGPSLAQELG-LGCVL--IRKRGKLPGPTLWASYSLEYGKAELEIQ-KDALEPGQRVVVVDDLLATGGT 135 (180)
T ss_dssp EEEEETTTHHHHHHHHHHHHT-CEEEE--EEETTCCCSSEEEEEEEETTEEEEEEEE-TTSSCTTCEEEEEEEEESSSHH
T ss_pred EEEEECCCchHHHHHHHHHhC-CCEEE--EEecCCCCcccccHHHHHhcCccEEEEe-ccccCCCCEEEEEcCCcccHHH
Confidence 477888889888877765442 33221 21111100 0 0111111 1222248999999999999999
Q ss_pred HHHHHHHHHHcCCCcccEEEEEEeeCh--hHHHHHH
Q 020306 258 VVAALNLVKECGVENKQIKVISAVAAP--PALQKLS 291 (328)
Q Consensus 258 l~aai~~L~~~Ga~~~~I~vv~~vas~--~Gi~~L~ 291 (328)
+.++++.|++.|+. .|.+++++..+ +|.+++.
T Consensus 136 l~~~~~~L~~~Ga~--~v~~~~l~~~~~~~~~~~l~ 169 (180)
T 1zn8_A 136 MNAACELLGRLQAE--VLECVSLVELTSLKGREKLA 169 (180)
T ss_dssp HHHHHHHHHHTTCE--EEEEEEEEEEGGGCHHHHHT
T ss_pred HHHHHHHHHHcCCE--EEEEEEEEEccCcchhhhhc
Confidence 99999999999984 56666665444 6788775
No 43
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=98.52 E-value=5.9e-07 Score=78.77 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=66.8
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCC-cccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEE-TLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~-t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~ 268 (328)
+++++...|+.+...+.+.+. .+...+.+.+... .... ..+-+...+|++|+||||+++||+|+.++++.|++.
T Consensus 66 ~vv~v~~gG~~~a~~la~~l~-~~~~~~~~rk~~~~~g~~----~~~~g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ 140 (180)
T 2p1z_A 66 AVGGLTLGADPVATSVMHADG-REIHAFVVRKEAKKHGMQ----RRIEGPDVVGKKVLVVEDTTTTGNSPLTAVKALREA 140 (180)
T ss_dssp EEEEETTTHHHHHHHHHHSSS-SCCEEEEECSCCC-CC-C----CSEESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHC-CCCCeEEEEeccccccch----hhccCCCCCcCEEEEEEeccCCcHHHHHHHHHHHHc
Confidence 578889999999888877552 2222222222211 1110 011122224899999999999999999999999999
Q ss_pred CCCcccEEEEEEeeCh-hHHHHHHHhCCCcEEEEeE
Q 020306 269 GVENKQIKVISAVAAP-PALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 269 Ga~~~~I~vv~~vas~-~Gi~~L~~~fP~v~Ivtaa 303 (328)
|+ +.+.+++++.-+ .|.+++.+. ++++++..
T Consensus 141 Ga--~~v~~~~l~~~~~~g~~~l~~~--g~~~~sl~ 172 (180)
T 2p1z_A 141 GA--EVVGVATVVDRATGAADVIAAE--GLEYRYIL 172 (180)
T ss_dssp TC--EEEEEEEEEC-CCCHHHHHHTT--TCCEEEEE
T ss_pred CC--eEEEEEEEEEcCcchHHHHHhc--CCeEEEEE
Confidence 97 456666665543 556666542 56666554
No 44
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=98.50 E-value=3.9e-07 Score=81.63 Aligned_cols=103 Identities=13% Similarity=0.214 Sum_probs=67.8
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCCc-ccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEET-LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKEC 268 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t-~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~ 268 (328)
+++++-.+|+++...+.+.+. .+.-. ..+...+ .... .+.+.+.+|++|+||||+++||+|+.++++.|++.
T Consensus 65 ~Iv~v~~~g~~~a~~la~~l~-~p~~~--~rk~~k~~g~~~----~~~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~ 137 (205)
T 2wns_A 65 TVCGVPYTALPLATVICSTNQ-IPMLI--RRKETKDYGTKR----LVEGTINPGETCLIIEDVVTSGSSVLETVEVLQKE 137 (205)
T ss_dssp EEEECTTTTHHHHHHHHHHHT-CCEEE--ECCTTTTSSSCC----SEESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred EEEEcCCchHHHHHHHHHHHC-cCEEE--EecCcCccCccc----cccCCCCCCCEEEEEEEeccccHHHHHHHHHHHHC
Confidence 478888889998887766442 22211 2221111 1111 11234445899999999999999999999999999
Q ss_pred CCCcccEEEEEEeeCh-hHHHHHHHhCCCcEEEEeE
Q 020306 269 GVENKQIKVISAVAAP-PALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 269 Ga~~~~I~vv~~vas~-~Gi~~L~~~fP~v~Ivtaa 303 (328)
|+. .+.+++++... .|.+++.+. ++++++..
T Consensus 138 Ga~--~v~~~~l~~~~~~~~~~l~~~--g~~v~sl~ 169 (205)
T 2wns_A 138 GLK--VTDAIVLLDREQGGKDKLQAH--GIRLHSVC 169 (205)
T ss_dssp TCB--CCEEEEEEECCSSHHHHHHTT--TCEEEEEE
T ss_pred CCE--EEEEEEEEEcCcchHHHHHHc--CCeEEEEE
Confidence 984 56666665554 667777653 56766654
No 45
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=98.50 E-value=5.3e-07 Score=79.57 Aligned_cols=51 Identities=18% Similarity=0.368 Sum_probs=42.8
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeC--hhHHHHHHHh
Q 020306 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAA--PPALQKLSEN 293 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas--~~Gi~~L~~~ 293 (328)
+|++|+||||+++||+|+.++++.|++.|+ +.|.+++++.- .+|.++|.+.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~~~~l~~~ 171 (197)
T 1y0b_A 119 DQDHVLIIDDFLANGQAAHGLVSIVKQAGA--SIAGIGIVIEKSFQPGRDELVKL 171 (197)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTC--EEEEEEEEEEETTSTHHHHHHHT
T ss_pred CcCEEEEEEcccccCHHHHHHHHHHHHCCC--EEEEEEEEEEecccchhhhHHhc
Confidence 489999999999999999999999999998 45666666554 3788888764
No 46
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=98.47 E-value=5.9e-07 Score=79.00 Aligned_cols=100 Identities=20% Similarity=0.273 Sum_probs=62.6
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecC-------------CcccceeeecCCCCCCCCCCEEEEEcCcccchH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDE-------------ETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGG 256 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~-------------~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGg 256 (328)
+++++.+.|+.+...+.+.+. .+.- ...+.. .......+...- +.+.+|++|+||||+++||+
T Consensus 56 ~Iv~vp~rG~~~A~~la~~l~-~p~~--~~rk~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~gk~VLLVDDVitTG~ 131 (186)
T 1l1q_A 56 KVVGIESRGFILGGIVANSLG-VGFV--ALRKAGKLPGDVCKCTFDMEYQKGVTIEVQK-RQLGPHDVVLLHDDVLATGG 131 (186)
T ss_dssp EEEEESGGGHHHHHHHHHHHT-CEEE--EEEETTSSCSSEEEEEEEETTEEEEEEEEEG-GGCCTTCCEEEEEEEESSSH
T ss_pred EEEEcCcccHHHHHHHHHHhC-CCEE--EEEecCCCCCceechhhhhhcCcceEEEEec-ccCCCcCEEEEEecccccHH
Confidence 477888999998888766432 2221 111100 000000111111 12224899999999999999
Q ss_pred HHHHHHHHHHHcCCCcccEEEEEEeeCh--hHHHHHHHh
Q 020306 257 TVVAALNLVKECGVENKQIKVISAVAAP--PALQKLSEN 293 (328)
Q Consensus 257 Tl~aai~~L~~~Ga~~~~I~vv~~vas~--~Gi~~L~~~ 293 (328)
|+.++++.|++.|+..+.+.+++++.-+ +|.+++.+.
T Consensus 132 Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~~g~~~l~~~ 170 (186)
T 1l1q_A 132 TLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQK 170 (186)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEEECGGGCHHHHHTTT
T ss_pred HHHHHHHHHHHcCCCcceEEEEEEEEccCccHHHHHhhc
Confidence 9999999999999851256667766655 588888543
No 47
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=98.43 E-value=3.9e-07 Score=80.13 Aligned_cols=102 Identities=18% Similarity=0.214 Sum_probs=63.7
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCCc-c-----------cceeeecCCCCCCCCCCEEEEEcCcccchHH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEET-L-----------QPSIYLNKLPEKFPEGSRIFVVDPMLATGGT 257 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t-~-----------e~~~yy~kLP~dI~~g~~VlLvDd~LATGgT 257 (328)
+++++.+.|+.+...+.+.+. .+...+ .+.... . ....+...-...+. |++|+||||+++||+|
T Consensus 62 ~Iv~v~~~G~~~a~~la~~l~-~p~~~~--rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~-gk~VLlVDDvitTG~T 137 (187)
T 1g2q_A 62 YIVGLESRGFLFGPTLALALG-VGFVPV--RKAGKLPGECFKATYEKEYGSDLFEIQKNAIPA-GSNVIIVDDIIATGGS 137 (187)
T ss_dssp EEEEETTTHHHHHHHHHHHHT-CEEEEE--EETTCSCSSEEEEEEECSSCEEEEEEETTSSCT-TCEEEEEEEEESSCHH
T ss_pred EEEEEccCcHHHHHHHHHHHC-CCEEEE--EEeCCCCcceecHHHHHHhCCCcEEEecccCCC-cCEEEEECCCcccHHH
Confidence 578889999988887766442 222222 221100 0 00111111122344 8999999999999999
Q ss_pred HHHHHHHHHHcCCCcccEEEEEEeeCh--hHHHHHHHhCCCcEEEEe
Q 020306 258 VVAALNLVKECGVENKQIKVISAVAAP--PALQKLSENFHGLHVYTG 302 (328)
Q Consensus 258 l~aai~~L~~~Ga~~~~I~vv~~vas~--~Gi~~L~~~fP~v~Ivta 302 (328)
+.++++.|++.|+ +.|.+++++..+ +|.+++ ++++++.
T Consensus 138 l~~~~~~L~~~Ga--~~v~~~~l~~~~~~~g~~~l-----~~~~~sl 177 (187)
T 1g2q_A 138 AAAAGELVEQLEA--NLLEYNFVMELDFLKGRSKL-----NAPVFTL 177 (187)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEEEECCCSSCCCCC-----SSCEEEC
T ss_pred HHHHHHHHHHcCC--eEEEEEEEEEccCcCchhhc-----CccEEEE
Confidence 9999999999998 467777776555 455444 4555543
No 48
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=98.28 E-value=2.3e-06 Score=77.62 Aligned_cols=87 Identities=14% Similarity=0.210 Sum_probs=56.0
Q ss_pred EEEEcCcChHHHHHHhccC--------CCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHH
Q 020306 191 VIPILRAGLVLVEHASSIL--------PAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAAL 262 (328)
Q Consensus 191 iVsILRaGl~m~~~lr~~l--------P~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai 262 (328)
++.+...|+++...+.+.+ .+.+...+...+... .+... .. ..+++ |++||||||+++||+|+.+++
T Consensus 71 Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~~-g~~~~-~~--~~~i~-Gk~VlIVDDvitTG~Tl~~a~ 145 (226)
T 2ps1_A 71 IFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKDH-GEGGI-IV--GSALE-NKRILIIDDVMTAGTAINEAF 145 (226)
T ss_dssp EEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEESS-TTCEE-EE--ESCCT-TCEEEEEEEEESSSHHHHHHH
T ss_pred EEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhhc-CCCce-Ee--cCCCC-cCEEEEEEecccChHHHHHHH
Confidence 4666778888877665544 244444333222111 11111 11 23464 899999999999999999999
Q ss_pred HHHHHcCCCcccEEEEEEeeCh
Q 020306 263 NLVKECGVENKQIKVISAVAAP 284 (328)
Q Consensus 263 ~~L~~~Ga~~~~I~vv~~vas~ 284 (328)
+.|++.|+. .+.+++++.-.
T Consensus 146 ~~L~~~Ga~--~v~v~~l~dr~ 165 (226)
T 2ps1_A 146 EIISNAKGQ--VVGSIIALDRQ 165 (226)
T ss_dssp HHHHHTTCE--EEEEEEEEECC
T ss_pred HHHHHcCCe--EEEEEEEEEcc
Confidence 999999974 55566665444
No 49
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=98.24 E-value=2.8e-06 Score=78.15 Aligned_cols=86 Identities=14% Similarity=0.228 Sum_probs=54.6
Q ss_pred eEEEEcCcChHHHHHHhccC-----CCCeeEEEEEeecCCc--ccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSIL-----PAIKTYHLGISRDEET--LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAAL 262 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~l-----P~a~~g~I~i~Rd~~t--~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai 262 (328)
+++++..+|+++...+...+ -+.+..++ |.+.. ...... . ...++ |++||||||+++||+|+.+++
T Consensus 84 ~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~---RK~~k~~g~~~~i-~--g~~~~-Gk~VLIVDDVitTG~Tl~~a~ 156 (232)
T 3mjd_A 84 ILFGPAYKGIPLVAAISTVLALKYNIDMPYAFD---RKEAKDHGEGGVF-V--GADMT-NKKVLLIDDVMTAGTAFYESY 156 (232)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEE---CCC-------CCE-E--ESCCT-TCEEEEECSCCSSSHHHHHHH
T ss_pred EEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEE---EeecccCCCCceE-e--ccCCC-CCEEEEEEeeccccHHHHHHH
Confidence 47888889998887775543 12333322 22110 000000 0 12454 899999999999999999999
Q ss_pred HHHHHcCCCcccEEEEEEeeCh
Q 020306 263 NLVKECGVENKQIKVISAVAAP 284 (328)
Q Consensus 263 ~~L~~~Ga~~~~I~vv~~vas~ 284 (328)
++|++.|+. -+.+++++.-.
T Consensus 157 ~~L~~~Ga~--vv~v~vlvdr~ 176 (232)
T 3mjd_A 157 NKLKIINAK--IAGVVLSIDRQ 176 (232)
T ss_dssp HHHHTTTCE--EEEEEEEEECC
T ss_pred HHHHHCCCE--EEEEEEEEECC
Confidence 999999984 35555555533
No 50
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=98.13 E-value=1.2e-05 Score=74.34 Aligned_cols=103 Identities=16% Similarity=0.293 Sum_probs=63.2
Q ss_pred eEEEEcCcChHHHHHHhccC-----CCCeeEEEEEeecCCc-cc-ceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSIL-----PAIKTYHLGISRDEET-LQ-PSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAAL 262 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~l-----P~a~~g~I~i~Rd~~t-~e-~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai 262 (328)
+++.+-.+|+++...+...+ -+.+..+ +.++... .+ ..+ . ...++ | +|+||||+++||+|+.+++
T Consensus 91 ~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~--~RK~~k~~g~~~~i--~--G~~~~-G-~VliVDDvitTG~T~~~a~ 162 (238)
T 3n2l_A 91 VLFGPAYKGIPIATTTAVALADHHDVDTPYCF--NRKEAKNHGEGGNL--V--GSKLE-G-RVMLVDDVITAGTAIRESM 162 (238)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHSCCCCBEEE--ECCC--------CE--E--ESCCC-S-EEEEECSCCSSSHHHHHHH
T ss_pred EEEecccChHHHHHHHHHHHhHhhCCCccEEE--EeeccCCCCCCceE--e--ccccC-C-cEEEEeeeecccHHHHHHH
Confidence 36778888988877765432 1233322 2221110 00 001 0 12454 8 9999999999999999999
Q ss_pred HHHHHcCCCcccEEEEEEeeC-------hhHHHHHHHhCCCcEEEEeE
Q 020306 263 NLVKECGVENKQIKVISAVAA-------PPALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 263 ~~L~~~Ga~~~~I~vv~~vas-------~~Gi~~L~~~fP~v~Ivtaa 303 (328)
++|++.|+.+ +.+++++.- ..|++++.+++ ++++++..
T Consensus 163 ~~l~~~Ga~v--v~v~vlvdr~egG~~~l~a~~~~~~~~-Gv~v~SL~ 207 (238)
T 3n2l_A 163 ELIQANKADL--AGVLVAIDRQEKGKGELSAIQEVERDF-GCAVISIV 207 (238)
T ss_dssp HHHHHTTCEE--EEEEEEEECCCBCSSSSBHHHHHHHHH-CCEEEEEE
T ss_pred HHHHHcCCEE--EEEEEEEEcccCccchhhHHHHHHHHc-CCCEEEEE
Confidence 9999999843 444555553 23677774443 67777654
No 51
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=98.12 E-value=2.6e-06 Score=72.70 Aligned_cols=85 Identities=21% Similarity=0.283 Sum_probs=54.0
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEE--EeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLG--ISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKE 267 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~--i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~ 267 (328)
++|.+.++|+.+...+.+.+.-.+...+. .|+...+.+.... +-+ +++ |++||||||+++||+|+.++++.|++
T Consensus 31 ~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y~~~~~~~~~~~--~~~-~~~-gk~VliVDDii~TG~Tl~~a~~~l~~ 106 (152)
T 1nul_A 31 GIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVL--KRA-EGD-GEGFIVIDDLVDTGGTAVAIREMYPK 106 (152)
T ss_dssp EEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC--------CEEE--ECC-SSC-CTTEEEEEEEECTTSSHHHHHHHCTT
T ss_pred EEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEecCcccceEEEe--cCC-CCC-cCEEEEEEeecCchHHHHHHHHHHhh
Confidence 48999999999998887654211244443 2222122222211 112 465 99999999999999999999999975
Q ss_pred cCCCcccEEEEEEeeChh
Q 020306 268 CGVENKQIKVISAVAAPP 285 (328)
Q Consensus 268 ~Ga~~~~I~vv~~vas~~ 285 (328)
+.+++++.-+.
T Consensus 107 -------v~~a~L~~k~~ 117 (152)
T 1nul_A 107 -------AHFVTIFAKPA 117 (152)
T ss_dssp -------SEEEEEEECGG
T ss_pred -------CCEEEEEECCC
Confidence 45566665543
No 52
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=98.09 E-value=1.4e-05 Score=71.87 Aligned_cols=103 Identities=15% Similarity=0.301 Sum_probs=61.9
Q ss_pred eEEEEcCcChHHHHHHhccC----C-CCeeEEEEEeecCCc--ccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSIL----P-AIKTYHLGISRDEET--LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAAL 262 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~l----P-~a~~g~I~i~Rd~~t--~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai 262 (328)
+++++..+|+++...+.+.+ . +.+.. +.|.+.. ...... . ...++ | +|+||||+++||+|+.+++
T Consensus 66 ~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~---~~rk~~~~~~~~~~~-~--g~~~~-g-~VliVDDvitTG~Tl~~a~ 137 (213)
T 1lh0_A 66 LLFGPAYKGIPIATTTAVALAEHHDKDLPYC---FNRKEAKDHGEGGSL-V--GSALQ-G-RVMLVDDVITAGTAIRESM 137 (213)
T ss_dssp EEECCTTTHHHHHHHHHHHHHHHHCCCCBEE---EECSSCCSSTTCSSE-E--ESCCC-S-EEEEECSCCSSSCHHHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHHHhhCCCCCEE---EEEeccCccCCCCce-e--CCCCC-C-CEEEEEecccchHHHHHHH
Confidence 47778888888877665544 1 23322 2232111 100000 1 12354 8 9999999999999999999
Q ss_pred HHHHHcCCCcccEEEEEEeeChhH-------HHHHHHhCCCcEEEEeE
Q 020306 263 NLVKECGVENKQIKVISAVAAPPA-------LQKLSENFHGLHVYTGI 303 (328)
Q Consensus 263 ~~L~~~Ga~~~~I~vv~~vas~~G-------i~~L~~~fP~v~Ivtaa 303 (328)
+.|++.|+. .+.+++++.-.+| ++++.+.+ ++++++..
T Consensus 138 ~~l~~~Ga~--~v~v~~l~dr~~~g~~~l~~~~~~~~~~-g~~v~sl~ 182 (213)
T 1lh0_A 138 EIIQAHGAT--LAGVLISLDRQERGRGEISAIQEVERDY-GCKVISII 182 (213)
T ss_dssp HHHHHTTCE--EEEEEEEEECCBBCSSSSBHHHHHHHHH-CCEEEEEE
T ss_pred HHHHHCCCe--EEEEEEEEEcccCcccchhhHHHHHHHc-CCCeEEEE
Confidence 999999984 4556666554432 23333332 56666554
No 53
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.05 E-value=3.3e-06 Score=72.89 Aligned_cols=44 Identities=18% Similarity=0.273 Sum_probs=37.6
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhH
Q 020306 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPA 286 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~G 286 (328)
+|++|+||||+++||+|+.++++.|++.|+ +.|.+++++...++
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga--~~V~~~~l~~~~~~ 162 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGG--HVVARLAVFRQGTP 162 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTC--EEEEEEEEEECSCC
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCC--eEEEEEEEEecCCC
Confidence 389999999999999999999999999997 46777777665544
No 54
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=97.99 E-value=1.7e-05 Score=75.05 Aligned_cols=44 Identities=25% Similarity=0.450 Sum_probs=37.1
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhH
Q 020306 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPA 286 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~G 286 (328)
+|++||||||+++||+|+.++++.|++.|+. .+.+++++...++
T Consensus 195 ~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~--vV~v~vlvdr~~~ 238 (291)
T 1o57_A 195 TGSNVLIIDDFMKAGGTINGMINLLDEFNAN--VAGIGVLVEAEGV 238 (291)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHTGGGTCE--EEEEEEEEEESSC
T ss_pred CcCEEEEEEEEcCcHHHHHHHHHHHHHCCCE--EEEEEEEEEcCcc
Confidence 4899999999999999999999999999984 4556666655555
No 55
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=97.89 E-value=2.5e-05 Score=78.82 Aligned_cols=86 Identities=23% Similarity=0.307 Sum_probs=55.1
Q ss_pred eEEEEcCcChHHHHHHhccC--CCCeeEEEEEeec-CCc--------c--cceeeecCCCCCCCCCCEEEEEcCcccchH
Q 020306 190 AVIPILRAGLVLVEHASSIL--PAIKTYHLGISRD-EET--------L--QPSIYLNKLPEKFPEGSRIFVVDPMLATGG 256 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~l--P~a~~g~I~i~Rd-~~t--------~--e~~~yy~kLP~dI~~g~~VlLvDd~LATGg 256 (328)
++|++..+|..++..+.+.+ |-. .+.+. .|. ..+ . +....+.-++.+++ |++||||||+++||+
T Consensus 297 vVv~vP~~g~~~A~~la~~lg~p~~-~~~~k-~r~~~~t~i~~~~~~R~~~v~~~~~~~~~~v~-Gk~VllVDDii~TG~ 373 (504)
T 1ecf_A 297 VVIPIPETSCDIALEIARILGKPYR-QGFVK-NRYVGRTFIMPGQQLRRKSVRRKLNANRAEFR-DKNVLLVDDSIVRGT 373 (504)
T ss_dssp EEEECTTTTHHHHHHHHHHHTCCBC-CCEEE-CSCCCCCCCCSSSCCCCCCSTTTEEECGGGTT-TCCEEEEESCCSSSH
T ss_pred EEEEECCcHHHHHHHHHHHhCCCce-eeEEE-ecccCCceeCccHHHHHHHHHhhhccccccCC-CCeEEEEeccccccH
Confidence 57888888988888776543 321 12221 111 000 0 11101111234566 899999999999999
Q ss_pred HHHHHHHHHHHcCCCcccEEEEEE
Q 020306 257 TVVAALNLVKECGVENKQIKVISA 280 (328)
Q Consensus 257 Tl~aai~~L~~~Ga~~~~I~vv~~ 280 (328)
|+.+++++|++.|++ .|.++++
T Consensus 374 Tl~~~~~~L~~~Ga~--~V~~~~l 395 (504)
T 1ecf_A 374 TSEQIIEMAREAGAK--KVYLASA 395 (504)
T ss_dssp HHHHHHHHHHHTTCS--SEEEEES
T ss_pred HHHHHHHHHHhcCCc--EEEEEEE
Confidence 999999999999984 5666654
No 56
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=97.86 E-value=1.8e-05 Score=79.26 Aligned_cols=115 Identities=17% Similarity=0.267 Sum_probs=70.3
Q ss_pred eEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCC-c-ccceeeecCCCCCCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 020306 190 AVIPILRAGLVLVEHASSILPAIKTYHLGISRDEE-T-LQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKE 267 (328)
Q Consensus 190 ~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~-t-~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgTl~aai~~L~~ 267 (328)
+++++..+|+++...+.+.+ +.+. + +-|.+. + .... .+-+++.+|++|+||||+++||+|+.++++.|++
T Consensus 319 ~Ivg~~~gGi~~A~~lA~~L-~~p~--~-~~rk~~k~~g~~~----~i~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~ 390 (453)
T 3qw4_B 319 RIAGLPYAALPIASAISNEM-NVPL--I-YPRREAKIYGTKA----AIEGEYKKGDRVVIIDDLVSTGETKVEAIEKLRS 390 (453)
T ss_dssp EEEECTTTTHHHHHHHHHHH-CCCE--E-EESSCC-----------CEESCCCTTCEEEEEEEEECC-CCHHHHHHHHHT
T ss_pred EEEeccCCcHHHHHHHHHHh-CCCE--E-EEEeeccccCcCc----eEecccCCCCEEEEEeeeechhHHHHHHHHHHHH
Confidence 58888999999988776544 2222 1 222111 1 1111 1123444599999999999999999999999999
Q ss_pred cCCCcccEEEEEEeeC-hhHHHHHHHhCCCcEEEEeEe-CC---CCCCCCcccc
Q 020306 268 CGVENKQIKVISAVAA-PPALQKLSENFHGLHVYTGII-DP---TVNDKGFIVP 316 (328)
Q Consensus 268 ~Ga~~~~I~vv~~vas-~~Gi~~L~~~fP~v~IvtaaI-D~---~Lde~gyIvP 316 (328)
.|+.. +.+++++.- ..|.+++.+. ++++++..- ++ .+.++|+|-+
T Consensus 391 ~g~~v--v~v~~lvdr~~~g~~~l~~~--g~~v~sL~~~~dl~~~~~~~~~i~~ 440 (453)
T 3qw4_B 391 AGLEV--VSIVVLVDRDMGAKAFLNKL--GYDFEAVVGLHQLLPLWRKSNAITS 440 (453)
T ss_dssp TTCEE--EEEEEEEECSSSHHHHHHHT--TCCEEEEEEHHHHHHHTTTTTCSCH
T ss_pred cCCEE--EEEEEEEECCcchHHHHHhc--CCCEEEEeEHHHHHHHHHHcCCCCH
Confidence 99854 445555544 3566777654 566665442 22 2345566543
No 57
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=97.62 E-value=3.1e-05 Score=77.14 Aligned_cols=40 Identities=23% Similarity=0.424 Sum_probs=34.8
Q ss_pred CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEE
Q 020306 237 EKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVIS 279 (328)
Q Consensus 237 ~dI~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~ 279 (328)
.+++ |++||||||+++||+|+.++++.|++.|++ .|.+++
T Consensus 334 ~~v~-gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~--~V~~~~ 373 (459)
T 1ao0_A 334 GVVE-GKRVVMVDDSIVRGTTSRRIVTMLREAGAT--EVHVKI 373 (459)
T ss_dssp HHHT-TCEEEEEESCCSSSHHHHHHHHHHHHTTCS--EEEEEE
T ss_pred ccCC-CCeEEEEeeeecCHHHHHHHHHHHHHcCCC--EEEEEE
Confidence 3465 899999999999999999999999999984 566665
No 58
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=38.31 E-value=1.3e+02 Score=26.71 Aligned_cols=46 Identities=30% Similarity=0.249 Sum_probs=25.0
Q ss_pred chHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCCCcEEEEeE
Q 020306 254 TGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 254 TGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP~v~Ivtaa 303 (328)
|-.|+..|++..++.|. ++|++++ .+.+...++.+.+.+++|++-+
T Consensus 28 T~~tl~la~era~e~~I--k~iVVAS--~sG~TA~k~~e~~~~i~lVvVT 73 (201)
T 1vp8_A 28 TEETLRLAVERAKELGI--KHLVVAS--SYGDTAMKALEMAEGLEVVVVT 73 (201)
T ss_dssp HHHHHHHHHHHHHHHTC--CEEEEEC--SSSHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCC--CEEEEEe--CCChHHHHHHHHhcCCeEEEEe
Confidence 66777777777777775 2433322 2223334444455555655554
No 59
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=38.16 E-value=90 Score=22.99 Aligned_cols=11 Identities=36% Similarity=0.480 Sum_probs=7.2
Q ss_pred CEEEEEcCccc
Q 020306 243 SRIFVVDPMLA 253 (328)
Q Consensus 243 ~~VlLvDd~LA 253 (328)
++|+|+||--.
T Consensus 3 ~~ilivdd~~~ 13 (120)
T 3f6p_A 3 KKILVVDDEKP 13 (120)
T ss_dssp CEEEEECSCHH
T ss_pred CeEEEEECCHH
Confidence 57777777543
No 60
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=37.45 E-value=1.1e+02 Score=22.54 Aligned_cols=9 Identities=11% Similarity=0.416 Sum_probs=5.1
Q ss_pred CEEEEEcCc
Q 020306 243 SRIFVVDPM 251 (328)
Q Consensus 243 ~~VlLvDd~ 251 (328)
.+|+|+||-
T Consensus 4 ~~ilivdd~ 12 (127)
T 3i42_A 4 QQALIVEDY 12 (127)
T ss_dssp EEEEEECSC
T ss_pred ceEEEEcCC
Confidence 456666653
No 61
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=36.98 E-value=92 Score=23.41 Aligned_cols=44 Identities=18% Similarity=0.273 Sum_probs=33.4
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhC
Q 020306 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENF 294 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~f 294 (328)
+++.|++++. +|.....|...|++.|.+ ++.++ ..|+....++.
T Consensus 51 ~~~~ivvyc~---~g~rs~~a~~~L~~~G~~--~v~~l-----~GG~~~W~~~g 94 (106)
T 3hix_A 51 KSRDIYVYGA---GDEQTSQAVNLLRSAGFE--HVSEL-----KGGLAAWKAIG 94 (106)
T ss_dssp TTSCEEEECS---SHHHHHHHHHHHHHTTCS--CEEEC-----TTHHHHHHHTT
T ss_pred CCCeEEEEEC---CCChHHHHHHHHHHcCCc--CEEEe-----cCCHHHHHHCC
Confidence 3577888764 799999999999999974 54332 57898887764
No 62
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=36.92 E-value=82 Score=23.38 Aligned_cols=11 Identities=18% Similarity=0.444 Sum_probs=7.4
Q ss_pred CEEEEEcCccc
Q 020306 243 SRIFVVDPMLA 253 (328)
Q Consensus 243 ~~VlLvDd~LA 253 (328)
++|+|+||--.
T Consensus 3 ~~ILivdd~~~ 13 (122)
T 3gl9_A 3 KKVLLVDDSAV 13 (122)
T ss_dssp CEEEEECSCHH
T ss_pred ceEEEEeCCHH
Confidence 47888887543
No 63
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=36.59 E-value=87 Score=23.18 Aligned_cols=26 Identities=15% Similarity=0.256 Sum_probs=14.6
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCC
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGV 270 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga 270 (328)
+.+|+|+||--.....+. +.|.+.|.
T Consensus 7 ~~~ilivdd~~~~~~~l~---~~L~~~g~ 32 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLD---SWFSSLGA 32 (130)
T ss_dssp TCEEEEECSCHHHHHHHH---HHHHHTTC
T ss_pred CCeEEEEeCCHHHHHHHH---HHHHhCCc
Confidence 578888888544433332 34445553
No 64
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=35.89 E-value=90 Score=23.64 Aligned_cols=26 Identities=12% Similarity=0.147 Sum_probs=13.5
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCC
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGV 270 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga 270 (328)
..+|+|+||--.... ...+.|.+.|.
T Consensus 5 ~~~ILivdd~~~~~~---~l~~~L~~~~~ 30 (144)
T 3kht_A 5 SKRVLVVEDNPDDIA---LIRRVLDRKDI 30 (144)
T ss_dssp CEEEEEECCCHHHHH---HHHHHHHHTTC
T ss_pred CCEEEEEeCCHHHHH---HHHHHHHhcCC
Confidence 467888887443322 22334445553
No 65
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=34.59 E-value=1.2e+02 Score=22.64 Aligned_cols=49 Identities=12% Similarity=0.113 Sum_probs=24.0
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCCCcE
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFHGLH 298 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP~v~ 298 (328)
..+|+|+||--.....+ .+.|.+.|. + +...-...++++.+.+..|++-
T Consensus 6 ~~~iLivdd~~~~~~~l---~~~l~~~g~---~--v~~~~~~~~a~~~l~~~~~dlv 54 (140)
T 3grc_A 6 RPRILICEDDPDIARLL---NLMLEKGGF---D--SDMVHSAAQALEQVARRPYAAM 54 (140)
T ss_dssp CSEEEEECSCHHHHHHH---HHHHHHTTC---E--EEEECSHHHHHHHHHHSCCSEE
T ss_pred CCCEEEEcCCHHHHHHH---HHHHHHCCC---e--EEEECCHHHHHHHHHhCCCCEE
Confidence 46788888854333333 234445553 1 2222333455555555544543
No 66
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=34.05 E-value=82 Score=27.55 Aligned_cols=58 Identities=14% Similarity=0.221 Sum_probs=36.2
Q ss_pred CEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEE----eeChhHHHHHHHhCCCcEEEEeE
Q 020306 243 SRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA----VAAPPALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 243 ~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~----vas~~Gi~~L~~~fP~v~Ivtaa 303 (328)
..++|+|+... ......++.|++. ...++|..+.+ ..=-.|+..+.++||+++||+..
T Consensus 51 ~~~iLID~G~~--~~~~~~~~~l~~~-~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~~v~~~~ 112 (262)
T 3hnn_A 51 DKTAIIDPPVE--SFMKIYLEALQQT-VNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSL 112 (262)
T ss_dssp SSEEEECCCCH--HHHHHHHHHHHHH-SCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECH
T ss_pred CCEEEEECCCc--chHHHHHHHHHHh-CChhhCCEEEECCCCcchhchHHHHHHHCCCCEEEECH
Confidence 45889998653 3334445556554 23456644433 12235888899999999998864
No 67
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=34.02 E-value=1.4e+02 Score=23.83 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=37.1
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCCCcEEEEe
Q 020306 239 FPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFHGLHVYTG 302 (328)
Q Consensus 239 I~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP~v~Ivta 302 (328)
+.+++.|++++. +|.....|...|++.|.. ++.+ + ..|+....++ +.++.+.
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~--~v~~---l--~GG~~~W~~~--g~p~~~~ 104 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFE--HVSE---L--KGGLAAWKAI--GGPTEGI 104 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCC--SEEE---C--TTHHHHHHHT--TCCEEEE
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCC--CEEE---e--cCHHHHHHHC--CCCcccC
Confidence 334678888865 899999999999999974 5433 2 5788888775 4444443
No 68
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=33.83 E-value=80 Score=28.09 Aligned_cols=63 Identities=17% Similarity=0.056 Sum_probs=42.6
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEE-e---eChhHHHHHHHhCCCcEEEEeEeCC
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA-V---AAPPALQKLSENFHGLHVYTGIIDP 306 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~-v---as~~Gi~~L~~~fP~v~IvtaaID~ 306 (328)
++.++|||+...+..+.....+.|++.|..++.|..|.+ - .=-.|+..+.+. +++||+..-+.
T Consensus 30 ~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~ 96 (317)
T 2zo4_A 30 AGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL--GARVFLHEEEF 96 (317)
T ss_dssp TTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT--TCEEEEEGGGT
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC--CCEEEEcHHHH
Confidence 458999999987766555566788899987666644333 1 112466667665 78999876554
No 69
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=33.40 E-value=1.3e+02 Score=22.78 Aligned_cols=49 Identities=18% Similarity=0.268 Sum_probs=23.9
Q ss_pred CEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCCCcEE
Q 020306 243 SRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFHGLHV 299 (328)
Q Consensus 243 ~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP~v~I 299 (328)
.+|+|+||--.....+. +.|.+.|. . +...-...++++.+.+..|++-|
T Consensus 5 ~~iLivdd~~~~~~~l~---~~L~~~g~---~--v~~~~~~~~al~~~~~~~~dlvl 53 (136)
T 3t6k_A 5 HTLLIVDDDDTVAEMLE---LVLRGAGY---E--VRRAASGEEALQQIYKNLPDALI 53 (136)
T ss_dssp CEEEEECSCHHHHHHHH---HHHHHTTC---E--EEEESSHHHHHHHHHHSCCSEEE
T ss_pred CEEEEEeCCHHHHHHHH---HHHHHCCC---E--EEEeCCHHHHHHHHHhCCCCEEE
Confidence 57888888654433332 33444553 1 22223334555555555445433
No 70
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=33.29 E-value=1.2e+02 Score=23.23 Aligned_cols=11 Identities=27% Similarity=0.193 Sum_probs=8.6
Q ss_pred CCEEEEEcCcc
Q 020306 242 GSRIFVVDPML 252 (328)
Q Consensus 242 g~~VlLvDd~L 252 (328)
+.+|+|+||--
T Consensus 15 ~~~iLivdd~~ 25 (152)
T 3eul_A 15 KVRVVVGDDHP 25 (152)
T ss_dssp CEEEEEECSSH
T ss_pred eEEEEEEcCCH
Confidence 67899998844
No 71
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=33.21 E-value=1.2e+02 Score=22.30 Aligned_cols=50 Identities=28% Similarity=0.125 Sum_probs=23.8
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCCCcEE
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFHGLHV 299 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP~v~I 299 (328)
..+|+|+||--.....+.. .|.+.|. . +...-...++++.+.+.-|++-|
T Consensus 6 ~~~ilivdd~~~~~~~l~~---~L~~~g~---~--v~~~~~~~~a~~~l~~~~~dlii 55 (132)
T 3lte_A 6 SKRILVVDDDQAMAAAIER---VLKRDHW---Q--VEIAHNGFDAGIKLSTFEPAIMT 55 (132)
T ss_dssp -CEEEEECSCHHHHHHHHH---HHHHTTC---E--EEEESSHHHHHHHHHHTCCSEEE
T ss_pred CccEEEEECCHHHHHHHHH---HHHHCCc---E--EEEeCCHHHHHHHHHhcCCCEEE
Confidence 4678888875444333333 3344453 1 22233334555555555445433
No 72
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=32.63 E-value=1.1e+02 Score=23.21 Aligned_cols=12 Identities=17% Similarity=0.324 Sum_probs=7.0
Q ss_pred CCEEEEEcCccc
Q 020306 242 GSRIFVVDPMLA 253 (328)
Q Consensus 242 g~~VlLvDd~LA 253 (328)
+.+|+|+||--.
T Consensus 5 ~~~ilivdd~~~ 16 (140)
T 3h5i_A 5 DKKILIVEDSKF 16 (140)
T ss_dssp -CEEEEECSCHH
T ss_pred CcEEEEEeCCHH
Confidence 356777777443
No 73
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=30.63 E-value=2.1e+02 Score=26.77 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=55.4
Q ss_pred eeEEEEcCcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchHH----HHHHHHH
Q 020306 189 VAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGT----VVAALNL 264 (328)
Q Consensus 189 i~iVsILRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGgT----l~aai~~ 264 (328)
+.+++ ..+.-.+.+++.+.+ +.+.|.+.+.|-.. +|. +.++++++. |++|+|+=+....-+. +.-.++.
T Consensus 8 ~~i~~-g~~~~~La~~ia~~l-g~~l~~~~~~~F~d-GE~---~v~i~esvr-g~dV~iiqs~~~p~nd~lmeLl~~idA 80 (319)
T 3dah_A 8 LMVFT-GNANPALAQEVVKIL-GIPLGKAMVSRFSD-GEI---QVEIQENVR-GKDVFVLQSTCAPTNDNLMELMIMVDA 80 (319)
T ss_dssp EEEEE-CSSCHHHHHHHHHHH-TSCCCCEEEEECTT-SCE---EEEECSCCB-TCEEEEECCCCSSHHHHHHHHHHHHHH
T ss_pred eEEEE-CCCCHHHHHHHHHHh-CCceeeeEEEECCC-CCE---EEEECCCcC-CCeEEEEccCCCCCcHHHHHHHHHHHH
Confidence 44444 567778888887755 46777777776322 222 355678887 8999999776654222 4556778
Q ss_pred HHHcCCCcccEEEEEE
Q 020306 265 VKECGVENKQIKVISA 280 (328)
Q Consensus 265 L~~~Ga~~~~I~vv~~ 280 (328)
+++.|| ++|.++..
T Consensus 81 ~k~asA--~rIt~ViP 94 (319)
T 3dah_A 81 LKRASA--GRITAAIP 94 (319)
T ss_dssp HHHTTB--SEEEEEES
T ss_pred HHHcCC--cEEEEEcc
Confidence 888887 57877765
No 74
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=30.52 E-value=1.2e+02 Score=26.55 Aligned_cols=58 Identities=16% Similarity=0.204 Sum_probs=37.4
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEE----eeChhHHHHHHHhCCCcEEEEeEeC
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA----VAAPPALQKLSENFHGLHVYTGIID 305 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~----vas~~Gi~~L~~~fP~v~IvtaaID 305 (328)
++.++|+|+...++ ...++.|++.|. +|..|.+ ..=-.|+..+.+.+|+.+||+..-+
T Consensus 27 ~~~~ilID~g~~~~---~~~~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~ 88 (245)
T 2gcu_A 27 DKPALLIDPVDKTV---DRDLKLIDELGL---KLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKAS 88 (245)
T ss_dssp TCEEEEESCBGGGH---HHHHHHHHHHTC---EEEEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGG
T ss_pred CCcEEEEeCCCchH---HHHHHHHHHCCC---eeeEEEeCCCChhhhhhHHHHHHhCCCCeEEecccc
Confidence 36899999987543 345566777785 2333222 1122577888877899999987543
No 75
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=30.16 E-value=67 Score=28.12 Aligned_cols=61 Identities=13% Similarity=0.261 Sum_probs=40.8
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEE----eeChhHHHHHHHhCCCcEEEEeEeC
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA----VAAPPALQKLSENFHGLHVYTGIID 305 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~----vas~~Gi~~L~~~fP~v~IvtaaID 305 (328)
++.++|+|+... .......+.|++.|..+++|..+.+ ..=-.|+..+.+. ++++||+..-+
T Consensus 63 ~~~~iLID~G~~--~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~-~~~~v~~~~~~ 127 (294)
T 3m8t_A 63 SQGLILMDTAMP--QSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKE-TGAQLVAGERD 127 (294)
T ss_dssp TTEEEEECCCCG--GGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHH-HCCEEEEEGGG
T ss_pred CCceEEEECCCc--hhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhc-cCCEEEEChHH
Confidence 357999998773 3456677888999987777755433 1112467777766 57888886543
No 76
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=28.68 E-value=91 Score=23.37 Aligned_cols=45 Identities=13% Similarity=0.193 Sum_probs=32.8
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCC
Q 020306 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFH 295 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP 295 (328)
+++.|++++. +|.....|...|++.|.+ ++.++ ..|++...+++|
T Consensus 57 ~~~~ivvyc~---~g~rs~~a~~~L~~~G~~--~v~~l-----~GG~~~W~~~~p 101 (108)
T 1gmx_A 57 FDTPVMVMCY---HGNSSKGAAQYLLQQGYD--VVYSI-----DGGFEAWQRQFP 101 (108)
T ss_dssp TTSCEEEECS---SSSHHHHHHHHHHHHTCS--SEEEE-----TTHHHHHHHHCG
T ss_pred CCCCEEEEcC---CCchHHHHHHHHHHcCCc--eEEEe-----cCCHHHHHHhCC
Confidence 3677888864 688888999999999973 55432 478887766555
No 77
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=27.58 E-value=1.1e+02 Score=27.20 Aligned_cols=60 Identities=13% Similarity=0.005 Sum_probs=37.8
Q ss_pred CCEEEEEcCcccc-hHHHHHHHHHHHHcCCCcccEEEEEE----eeChhHHHHHHHhCCCcEEEEeEe
Q 020306 242 GSRIFVVDPMLAT-GGTVVAALNLVKECGVENKQIKVISA----VAAPPALQKLSENFHGLHVYTGII 304 (328)
Q Consensus 242 g~~VlLvDd~LAT-GgTl~aai~~L~~~Ga~~~~I~vv~~----vas~~Gi~~L~~~fP~v~IvtaaI 304 (328)
++.++|+|+.... +..+.++++.+.+ + ..+|..+.+ ..=-.|+..+.++||+.+||+..-
T Consensus 33 ~~~~iLID~G~~~~~~~~~~~l~~~~~-~--~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~ 97 (303)
T 2vw8_A 33 EASWALVEGGISRDAELVWADLCRWVA-D--PSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASER 97 (303)
T ss_dssp TTEEEEECCCCGGGHHHHHHHHHHHCS-C--GGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHH
T ss_pred CCceEEEECCCCCcHHHHHHHHHHHhc-C--cccceEEEeccCCccccCCHHHHHHhCCCCeEEECHH
Confidence 4688999998754 4455555443311 2 345554443 222357888989999999998654
No 78
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=27.52 E-value=1.3e+02 Score=24.31 Aligned_cols=15 Identities=20% Similarity=0.313 Sum_probs=9.8
Q ss_pred CCEEEEEcCcccchH
Q 020306 242 GSRIFVVDPMLATGG 256 (328)
Q Consensus 242 g~~VlLvDd~LATGg 256 (328)
..+|+|+||--....
T Consensus 7 ~~~iLivdd~~~~~~ 21 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAG 21 (184)
T ss_dssp CCEEEEECSCHHHHH
T ss_pred CCeEEEEcCCHHHHH
Confidence 468888888554433
No 79
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=27.09 E-value=1.5e+02 Score=21.81 Aligned_cols=11 Identities=27% Similarity=0.465 Sum_probs=6.9
Q ss_pred CCEEEEEcCcc
Q 020306 242 GSRIFVVDPML 252 (328)
Q Consensus 242 g~~VlLvDd~L 252 (328)
+.+|+|+||--
T Consensus 2 ~~~ilivdd~~ 12 (140)
T 1k68_A 2 HKKIFLVEDNK 12 (140)
T ss_dssp CCEEEEECCCH
T ss_pred CCeEEEEeCCH
Confidence 35677777644
No 80
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=26.68 E-value=1.6e+02 Score=24.34 Aligned_cols=44 Identities=30% Similarity=0.407 Sum_probs=22.6
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHH
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSE 292 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~ 292 (328)
+.+||||||--..-. ...++|.+.|.. .+...-...++++.+.+
T Consensus 61 ~~~ILiVdDd~~~~~---~l~~~L~~~g~~----~v~~a~~~~eal~~l~~ 104 (206)
T 3mm4_A 61 GKRVLVVDDNFISRK---VATGKLKKMGVS----EVEQCDSGKEALRLVTE 104 (206)
T ss_dssp TCEEEEECSCHHHHH---HHHHHHHHTTCS----EEEEESSHHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHH---HHHHHHHHcCCC----eeeeeCCHHHHHHHHHh
Confidence 689999999643332 233344555531 12222333455555544
No 81
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=26.33 E-value=1.8e+02 Score=22.28 Aligned_cols=11 Identities=27% Similarity=0.374 Sum_probs=7.6
Q ss_pred CCEEEEEcCcc
Q 020306 242 GSRIFVVDPML 252 (328)
Q Consensus 242 g~~VlLvDd~L 252 (328)
..+|+|+||--
T Consensus 14 ~~~ILivdd~~ 24 (153)
T 3hv2_A 14 RPEILLVDSQE 24 (153)
T ss_dssp CCEEEEECSCH
T ss_pred CceEEEECCCH
Confidence 46788888754
No 82
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=25.98 E-value=1.6e+02 Score=22.11 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=32.9
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhC
Q 020306 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENF 294 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~f 294 (328)
+++.|++++ .+|.....|...|++.|. ++..+ ..|+....++.
T Consensus 54 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~---~v~~l-----~GG~~~W~~~~ 96 (108)
T 3gk5_A 54 RDKKYAVIC---AHGNRSAAAVEFLSQLGL---NIVDV-----EGGIQSWIEEG 96 (108)
T ss_dssp TTSCEEEEC---SSSHHHHHHHHHHHTTTC---CEEEE-----TTHHHHHHHTT
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCC---CEEEE-----cCcHHHHHHcC
Confidence 467888887 689889999999999996 44332 57888887764
No 83
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=25.88 E-value=2e+02 Score=21.14 Aligned_cols=9 Identities=11% Similarity=0.264 Sum_probs=5.0
Q ss_pred EEEEEcCcc
Q 020306 244 RIFVVDPML 252 (328)
Q Consensus 244 ~VlLvDd~L 252 (328)
+|+|+||--
T Consensus 3 ~ilivdd~~ 11 (134)
T 3f6c_A 3 NAIIIDDHP 11 (134)
T ss_dssp EEEEECCCH
T ss_pred EEEEEcCCH
Confidence 456666543
No 84
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=25.03 E-value=1.6e+02 Score=20.65 Aligned_cols=12 Identities=8% Similarity=0.207 Sum_probs=6.9
Q ss_pred CEEEEEcCcccc
Q 020306 243 SRIFVVDPMLAT 254 (328)
Q Consensus 243 ~~VlLvDd~LAT 254 (328)
.+|+|+||--..
T Consensus 2 ~~iliv~~~~~~ 13 (119)
T 2j48_A 2 GHILLLEEEDEA 13 (119)
T ss_dssp CEEEEECCCHHH
T ss_pred CEEEEEeCCHHH
Confidence 467777765433
No 85
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=23.26 E-value=1.7e+02 Score=23.36 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=26.1
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHHhCCCcE
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFHGLH 298 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~~fP~v~ 298 (328)
+-+||||||--..- ....+.|++.|.. .+ ...-...++++.+.+.-||+-
T Consensus 12 ~~rILiVDD~~~~r---~~l~~~L~~~G~~--~v--~~a~~g~~al~~~~~~~~Dli 61 (134)
T 3to5_A 12 NMKILIVDDFSTMR---RIVKNLLRDLGFN--NT--QEADDGLTALPMLKKGDFDFV 61 (134)
T ss_dssp TCCEEEECSCHHHH---HHHHHHHHHTTCC--CE--EEESSHHHHHHHHHHHCCSEE
T ss_pred CCEEEEEeCCHHHH---HHHHHHHHHcCCc--EE--EEECCHHHHHHHHHhCCCCEE
Confidence 45799999954332 2233456677752 11 112233456666665544543
No 86
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.49 E-value=1.7e+02 Score=22.61 Aligned_cols=13 Identities=15% Similarity=0.327 Sum_probs=7.8
Q ss_pred CCEEEEEcCcccc
Q 020306 242 GSRIFVVDPMLAT 254 (328)
Q Consensus 242 g~~VlLvDd~LAT 254 (328)
..+|+|+||--..
T Consensus 7 ~~~ILivdd~~~~ 19 (154)
T 3gt7_A 7 AGEILIVEDSPTQ 19 (154)
T ss_dssp CCEEEEECSCHHH
T ss_pred CCcEEEEeCCHHH
Confidence 3567777774433
No 87
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=22.40 E-value=2.4e+02 Score=20.88 Aligned_cols=10 Identities=10% Similarity=0.228 Sum_probs=6.5
Q ss_pred CCEEEEEcCc
Q 020306 242 GSRIFVVDPM 251 (328)
Q Consensus 242 g~~VlLvDd~ 251 (328)
..+|+|+||-
T Consensus 9 ~~~iLivdd~ 18 (146)
T 3ilh_A 9 IDSVLLIDDD 18 (146)
T ss_dssp EEEEEEECSC
T ss_pred cceEEEEeCC
Confidence 3567777774
No 88
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=22.17 E-value=1.9e+02 Score=20.85 Aligned_cols=10 Identities=10% Similarity=0.338 Sum_probs=5.2
Q ss_pred EEEEEcCccc
Q 020306 244 RIFVVDPMLA 253 (328)
Q Consensus 244 ~VlLvDd~LA 253 (328)
+|+|+||--.
T Consensus 3 ~ilivdd~~~ 12 (124)
T 1mb3_A 3 KVLIVEDNEL 12 (124)
T ss_dssp EEEEECSCHH
T ss_pred EEEEEcCCHH
Confidence 4555555433
No 89
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=22.09 E-value=1.6e+02 Score=20.89 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=24.6
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEE
Q 020306 241 EGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKV 277 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~v 277 (328)
+++.|+++. .+|.....|...|++.|.+ ++.+
T Consensus 40 ~~~~ivv~C---~~g~rs~~aa~~L~~~G~~--~v~~ 71 (85)
T 2jtq_A 40 KNDTVKVYC---NAGRQSGQAKEILSEMGYT--HVEN 71 (85)
T ss_dssp TTSEEEEEE---SSSHHHHHHHHHHHHTTCS--SEEE
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHcCCC--CEEe
Confidence 367888886 4688888999999999974 5544
No 90
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=21.77 E-value=77 Score=27.74 Aligned_cols=60 Identities=17% Similarity=0.220 Sum_probs=39.1
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEE----eeChhHHHHHHHhCCCcEEEEeEe
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA----VAAPPALQKLSENFHGLHVYTGII 304 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~----vas~~Gi~~L~~~fP~v~IvtaaI 304 (328)
++.++|+|+... .......+.|++.|..+++|..+.+ ..=-.|+..+.+.+ +++||+..-
T Consensus 66 ~~~~iLiD~G~~--~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-~~~v~~~~~ 129 (303)
T 4ax1_B 66 DAGHILVDAATP--QAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT-GAPVYARAP 129 (303)
T ss_dssp TTCEEEECCBST--TCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH-CCCEEEEHH
T ss_pred CCcEEEEECCCc--ccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc-CCEEEEcHH
Confidence 467899999763 3455667888899987767655443 11124666776664 678877643
No 91
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=21.66 E-value=1.4e+02 Score=21.96 Aligned_cols=42 Identities=10% Similarity=0.356 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeChhHHHHHHH
Q 020306 240 PEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSE 292 (328)
Q Consensus 240 ~~g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas~~Gi~~L~~ 292 (328)
.+++.|+++. .+|.....|...|++.|. ++..+ ..|+....+
T Consensus 54 ~~~~~ivvyC---~~g~rs~~a~~~L~~~G~---~v~~l-----~GG~~~W~~ 95 (100)
T 3foj_A 54 NDNETYYIIC---KAGGRSAQVVQYLEQNGV---NAVNV-----EGGMDEFGD 95 (100)
T ss_dssp CTTSEEEEEC---SSSHHHHHHHHHHHTTTC---EEEEE-----TTHHHHHCS
T ss_pred CCCCcEEEEc---CCCchHHHHHHHHHHCCC---CEEEe-----cccHHHHHH
Confidence 3468888886 789999999999999996 43322 467766543
No 92
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=21.52 E-value=1.3e+02 Score=26.03 Aligned_cols=60 Identities=8% Similarity=0.034 Sum_probs=38.8
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEE----eeChhHHHHHHHhCCCcEEEEeEe
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISA----VAAPPALQKLSENFHGLHVYTGII 304 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~----vas~~Gi~~L~~~fP~v~IvtaaI 304 (328)
++.++|+|+... .+.....+.|++.|..+++|..|.+ ..=-.|+..+.+.+ +++||+..-
T Consensus 33 ~~~~iLID~G~~--~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~-~~~v~~~~~ 96 (263)
T 1k07_A 33 PRGNILINSDLE--ANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQT-KAKYMVMDE 96 (263)
T ss_dssp TTEEEEECCCCG--GGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHH-CCEEEEEHH
T ss_pred CCceEEEECCCc--ccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhc-CCEEEEcHH
Confidence 357899998764 3455667788889987777765443 11124666676653 788887643
No 93
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=21.33 E-value=5e+02 Score=24.25 Aligned_cols=78 Identities=9% Similarity=0.115 Sum_probs=52.3
Q ss_pred cCcChHHHHHHhccCCCCeeEEEEEeecCCcccceeeecCCCCCCCCCCEEEEEcCcccchH----HHHHHHHHHHHcCC
Q 020306 195 LRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGG----TVVAALNLVKECGV 270 (328)
Q Consensus 195 LRaGl~m~~~lr~~lP~a~~g~I~i~Rd~~t~e~~~yy~kLP~dI~~g~~VlLvDd~LATGg----Tl~aai~~L~~~Ga 270 (328)
..+.-.+.+++.+.+ +.+.|.+.+.|-.. +|. +.++++++. |++|+|+=+....=+ -+.-.++.+++.||
T Consensus 9 g~~~~~La~~ia~~l-g~~l~~~~~~~F~d-GE~---~v~i~esvr-g~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA 82 (326)
T 3s5j_B 9 GSSHQDLSQKIADRL-GLELGKVVTKKFSN-QET---CVEIGESVR-GEDVYIVQSGCGEINDNLMELLIMINACKIASA 82 (326)
T ss_dssp CSSCCHHHHHHHHHT-TCCCCCEEEEECTT-SCE---EEEECSCCT-TCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHh-CCceeeeEEeECCC-CCE---EEEECCCcC-CCcEEEEecCCCCccHHHHHHHHHHHHHHhcCC
Confidence 566677888887755 46777777777322 222 355678887 899999987654322 23455677888888
Q ss_pred CcccEEEEEE
Q 020306 271 ENKQIKVISA 280 (328)
Q Consensus 271 ~~~~I~vv~~ 280 (328)
++|.++..
T Consensus 83 --~rIt~ViP 90 (326)
T 3s5j_B 83 --SRVTAVIP 90 (326)
T ss_dssp --SEEEEEES
T ss_pred --cEEEEecc
Confidence 57877665
No 94
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=21.27 E-value=1.6e+02 Score=26.23 Aligned_cols=58 Identities=14% Similarity=0.174 Sum_probs=39.0
Q ss_pred CCEEEEEcCccc--------chHHHHHHHHHHHHcCCCcccEEEEEE----eeChhHHHHHHHhCCCcEEEEeE
Q 020306 242 GSRIFVVDPMLA--------TGGTVVAALNLVKECGVENKQIKVISA----VAAPPALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 242 g~~VlLvDd~LA--------TGgTl~aai~~L~~~Ga~~~~I~vv~~----vas~~Gi~~L~~~fP~v~Ivtaa 303 (328)
++.++|||+.+. +.+.....++.|++.|.+ |..|.+ ..=-.|+..+.+++ +.+||+..
T Consensus 27 ~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~---i~~Il~TH~H~DH~gg~~~l~~~~-~a~i~~~~ 96 (298)
T 4efz_A 27 SGECALIDSVLDYDPKSGRTRTASADQLIARVAALGAR---VRWLLETHVHADHLSAAPYLKTRV-GGEIAIGR 96 (298)
T ss_dssp TCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCE---EEEEECSSCCSSSBCCHHHHHHHH-CCEEEEET
T ss_pred CCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCc---ceEEEECCCchhhhhhHHHHHHHh-CCcEEECh
Confidence 578999999875 225677788888888863 433332 11224777788776 77887764
No 95
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.87 E-value=1.8e+02 Score=22.07 Aligned_cols=10 Identities=30% Similarity=0.481 Sum_probs=5.8
Q ss_pred CCEEEEEcCc
Q 020306 242 GSRIFVVDPM 251 (328)
Q Consensus 242 g~~VlLvDd~ 251 (328)
..+|+|+||-
T Consensus 14 ~~~iLivdd~ 23 (143)
T 3m6m_D 14 SMRMLVADDH 23 (143)
T ss_dssp -CEEEEECSS
T ss_pred cceEEEEeCC
Confidence 3567777764
No 96
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=20.77 E-value=2.2e+02 Score=21.64 Aligned_cols=11 Identities=9% Similarity=0.226 Sum_probs=7.4
Q ss_pred CCEEEEEcCcc
Q 020306 242 GSRIFVVDPML 252 (328)
Q Consensus 242 g~~VlLvDd~L 252 (328)
..+|+|+||--
T Consensus 20 m~~iLivdd~~ 30 (150)
T 4e7p_A 20 HMKVLVAEDQS 30 (150)
T ss_dssp CEEEEEECSCH
T ss_pred ccEEEEEcCCH
Confidence 45788888743
No 97
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=20.69 E-value=2.3e+02 Score=21.03 Aligned_cols=18 Identities=6% Similarity=0.109 Sum_probs=9.6
Q ss_pred HHHHHH--hCCCcEEEEeEe
Q 020306 287 LQKLSE--NFHGLHVYTGII 304 (328)
Q Consensus 287 i~~L~~--~fP~v~IvtaaI 304 (328)
++++.+ .+|+++|+..+-
T Consensus 70 ~~~l~~~~~~~~~pii~~s~ 89 (142)
T 3cg4_A 70 IRAILDNSLEQGIAIVMLTA 89 (142)
T ss_dssp HHHHHHTTCCTTEEEEEEEC
T ss_pred HHHHHhhcccCCCCEEEEEC
Confidence 445555 456666555443
No 98
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=20.56 E-value=2e+02 Score=21.03 Aligned_cols=12 Identities=17% Similarity=0.152 Sum_probs=6.7
Q ss_pred CEEEEEcCcccc
Q 020306 243 SRIFVVDPMLAT 254 (328)
Q Consensus 243 ~~VlLvDd~LAT 254 (328)
.+|+|+||--..
T Consensus 6 ~~ilivdd~~~~ 17 (132)
T 2rdm_A 6 VTILLADDEAIL 17 (132)
T ss_dssp CEEEEECSSHHH
T ss_pred ceEEEEcCcHHH
Confidence 466666664433
No 99
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=20.39 E-value=1.3e+02 Score=26.68 Aligned_cols=52 Identities=23% Similarity=0.385 Sum_probs=34.8
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCCcccEEEEEEeeC------hhHHHHHHHhCCCcEEEEeE
Q 020306 242 GSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAA------PPALQKLSENFHGLHVYTGI 303 (328)
Q Consensus 242 g~~VlLvDd~LATGgTl~aai~~L~~~Ga~~~~I~vv~~vas------~~Gi~~L~~~fP~v~Ivtaa 303 (328)
++.++|||+. .+ ...++.|++.|.+ |. .++.+ -.|+..+.+.||+++||+..
T Consensus 22 ~~~~vlID~G--~~---~~i~~~l~~~g~~---i~--~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~ 79 (260)
T 1qh5_A 22 TKEAAIVDPV--QP---QKVVDAARKHGVK---LT--TVLTTHHHWDHAGGNEKLVKLESGLKVYGGD 79 (260)
T ss_dssp TTEEEEESCS--SH---HHHHHHHHHHTCE---EE--EEECCCSSHHHHTTHHHHHHHSTTCEEEESC
T ss_pred CCEEEEEcCC--CH---HHHHHHHHHcCCC---cc--EEEeCCCCccccCCHHHHHHHCCCCEEEECc
Confidence 4689999985 23 3456677777863 32 22222 24788898999999999874
No 100
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=20.25 E-value=2.2e+02 Score=21.18 Aligned_cols=21 Identities=10% Similarity=0.055 Sum_probs=13.3
Q ss_pred CCCEEEEEcCcccchHHHHHH
Q 020306 241 EGSRIFVVDPMLATGGTVVAA 261 (328)
Q Consensus 241 ~g~~VlLvDd~LATGgTl~aa 261 (328)
++.+|+|+||--.....+...
T Consensus 14 ~~~~ilivdd~~~~~~~l~~~ 34 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLIQYH 34 (138)
T ss_dssp CCCEEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHH
Confidence 367899999865544444333
Done!