BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020307
(328 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WPT7|Y2104_ARATH Uncharacterized methyltransferase At2g41040, chloroplastic
OS=Arabidopsis thaliana GN=At2g41040 PE=1 SV=1
Length = 352
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/305 (68%), Positives = 245/305 (80%), Gaps = 9/305 (2%)
Query: 33 RFSSTIRAVTLQPAKSERNQTLELEGD---LFSCPICYEPLIRKGPTGLTLGAIYRSGFK 89
RF S + + +N+T ++E + +F+CP+CYEPL+RKGP+G+ L AIYRSGFK
Sbjct: 48 RFPSAAISAVAPKSDINKNETPKIEIEETQVFACPVCYEPLMRKGPSGINLQAIYRSGFK 107
Query: 90 CRKCDKTYSSKDNYLDLTVISGLKDYTEVKPASTELFRSPFVSFLYERGWRQNFNRSGFP 149
C +C+KTYSSKD YLDLTV + L DY EVKP +TELFRSP VSFLYERGWRQ F RSGFP
Sbjct: 108 CGQCNKTYSSKDEYLDLTVTADLDDYNEVKPITTELFRSPLVSFLYERGWRQAFKRSGFP 167
Query: 150 GPDEE-----EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDF 204
GPDEE EYFK A+GGLLVDVSCGSGLFSRKFA+SG YSGV+ALD+SENMLRQC +F
Sbjct: 168 GPDEEFRMAEEYFKEAEGGLLVDVSCGSGLFSRKFAQSGKYSGVIALDYSENMLRQCKEF 227
Query: 205 IKQDNTILTS-NLALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 263
IK DNT S N+A+VRADV RLPF SG VDAVHAGAALHCWPSP+NA+AEI R+LRSGG
Sbjct: 228 IKNDNTFDNSTNIAVVRADVSRLPFPSGSVDAVHAGAALHCWPSPTNAIAEICRVLRSGG 287
Query: 264 VFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQSFIMF 323
VFVGTTFLRY+ ST R + RILQ+YNYL ++EI+D+CTSCGLT+Y +Q SFIMF
Sbjct: 288 VFVGTTFLRYSPSTPWIIRPFQSRILQSYNYLMQDEIKDVCTSCGLTDYEDYIQDSFIMF 347
Query: 324 AAQKP 328
A+KP
Sbjct: 348 TARKP 352
>sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic
OS=Arabidopsis thaliana GN=At1g78140 PE=1 SV=1
Length = 355
Score = 290 bits (743), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 193/294 (65%), Gaps = 16/294 (5%)
Query: 47 KSERNQTLELEGDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLD 105
K ++N+ E + +CPICY L P GL A +C C ++YS + +LD
Sbjct: 65 KKDKNRG---EKKILACPICYNSLAWISQPNGLIESAASGIQVQCNTCKRSYSGNETHLD 121
Query: 106 LTVISGLKDYTEVKPASTELFRSPFVSFLYERGWRQNFNRSGFPGPDEE-----EYFKSA 160
L V SG K Y+E P STELFR+P VSFLYERGWRQNF GFPGP++E Y K
Sbjct: 122 LAVASGSKRYSEPMPLSTELFRTPLVSFLYERGWRQNFIWGGFPGPEKEFEMAKAYLKPV 181
Query: 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFI-KQDNTILTSNLALV 219
GG ++D SCGSG+FSR F +S +S V+ALD+SENMLRQCY+ + K++N L LV
Sbjct: 182 LGGNIIDASCGSGMFSRLFTRSDLFSLVIALDYSENMLRQCYELLNKEENFPNKEKLVLV 241
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL 279
RAD+ RLPF SG VDAVHAGAALHCWPSPS+AVAEISR+LR GGVFV TTF+ Y S
Sbjct: 242 RADIARLPFLSGSVDAVHAGAALHCWPSPSSAVAEISRVLRPGGVFVATTFI-YDGPFSF 300
Query: 280 TG--RVLRERILQ---NYNYLTEEEIEDLCTSCGLTNYTSKVQQSFIMFAAQKP 328
+ LR+ I++ ++ +L E E+ED+C +CGL N+T FIM +A KP
Sbjct: 301 IPFLKNLRQEIMRYSGSHIFLNERELEDICKACGLVNFTRVRNGPFIMLSATKP 354
>sp|Q24W96|UBIE_DESHY Demethylmenaquinone methyltransferase OS=Desulfitobacterium
hafniense (strain Y51) GN=ubiE PE=3 SV=1
Length = 253
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 130 FVSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGV 188
+SF ++GWR+ ++ ++ G +VD+ CG+ S + A + G +
Sbjct: 43 LMSFGLDKGWRKKAVQT----------VEAKPGMTMVDICCGTAQLSLELAMTVGEQGQI 92
Query: 189 VALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSP 248
LDFSENML++ + + + S + L + D LPFA D G L P
Sbjct: 93 TGLDFSENMLKKAQENLA--GSPYRSIIELRQGDAMNLPFADNSFDGATVGWGLRNLPDL 150
Query: 249 SNAVAEISRILRSGGVFVGTT-------------FLRYTSSTSLTGRVLRERILQNYNYL 295
V E+ R+++ GG+ V +L + L G++ + + Y YL
Sbjct: 151 EKGVQEMIRVVKPGGMVVSLDMAKPTMPGFKQGYWLYFNKLVPLMGKIWAGKA-KAYQYL 209
Query: 296 --------TEEEIEDLCTSCGLT 310
+++E+ ++ CGLT
Sbjct: 210 HDSAVEFPSQQELANIFARCGLT 232
>sp|B9DNV5|UBIE_STACT Demethylmenaquinone methyltransferase OS=Staphylococcus carnosus
(strain TM300) GN=ubiE PE=3 SV=1
Length = 241
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSG-VV 189
+SF + WR+ +S + +G +DV CG+ ++ +K+ SG V+
Sbjct: 29 ISFEQHKVWRKRVMKS----------MQVKKGSKALDVCCGTADWTIALSKAVGPSGEVI 78
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFSENML+ + ++ T SN+ LV+ D LPF D V G L P
Sbjct: 79 GLDFSENMLK-----VGEEKTKNMSNIQLVQGDAMDLPFDDNEFDYVTIGFGLRNIPDYV 133
Query: 250 NAVAEISRILRSGGVFV 266
A+ E++R+L+ GG+ V
Sbjct: 134 IALKEMNRVLKPGGMAV 150
>sp|Q4L6H3|UBIE_STAHJ Demethylmenaquinone methyltransferase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ubiE PE=3 SV=1
Length = 239
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVV 189
+SF + WR++ + G +DV CG+ ++ +K+ G + V
Sbjct: 29 ISFEQHKVWRKHVMKD----------MHVKVGSKALDVCCGTADWTIALSKAVGAHGEVT 78
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFSENML + ++ T +N+ LV D LPF D V G L P
Sbjct: 79 GLDFSENMLE-----VGKEKTKHMNNIHLVHGDAMNLPFEDNSFDYVTIGFGLRNVPDYL 133
Query: 250 NAVAEISRILRSGGVFV 266
A+ E++R+L+ GG+ V
Sbjct: 134 VALKEMNRVLKPGGMIV 150
>sp|O66128|UBIE_MICLU Demethylmenaquinone methyltransferase OS=Micrococcus luteus GN=ubiE
PE=3 SV=1
Length = 246
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ + A++ G V+ LDFSENML + Q T N+ L+
Sbjct: 58 KGSKALDVCCGTGDWTIQMAQAVGKNGHVIGLDFSENMLS-----VAQGKTNHIQNIELI 112
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
+ LPF D G L P + E+ R+L+ GG+ V
Sbjct: 113 HGNAMELPFEDNIFDYTTIGFGLRNLPDYKKGLEEMYRVLKPGGMIV 159
>sp|Q6GGU0|UBIE_STAAR Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MRSA252) GN=ubiE PE=3 SV=1
Length = 241
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G+ V +DFSENML + ++ T N+ LV
Sbjct: 49 KGMKALDVCCGTGDWTIALSKAVGSTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|Q2YY85|UBIE_STAAB Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFGDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|P67063|UBIE_STAAW Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MW2) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|A8Z450|UBIE_STAAT Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|Q6G992|UBIE_STAAS Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MSSA476) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|P67062|UBIE_STAAN Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain N315) GN=ubiE PE=1 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|P67061|UBIE_STAAM Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=ubiE PE=1 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|A6QH20|UBIE_STAAE Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Newman) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|Q5HFV2|UBIE_STAAC Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain COL) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|A5ISZ9|UBIE_STAA9 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain JH9) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|A6U1T9|UBIE_STAA2 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain JH1) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|A7X2H6|UBIE_STAA1 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=ubiE PE=3 SV=1
Length = 241
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
D LPF D V G L P A+ E++R+L+ GG+ V
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVV 150
>sp|Q49XS5|UBIE_STAS1 Demethylmenaquinone methyltransferase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=ubiE PE=3 SV=1
Length = 233
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSG-VV 189
+SF + WR+ + E KS L DV CG+ ++ +K+ ++G V+
Sbjct: 29 ISFEQHKTWRKRVMK--------EMNVKSGSKAL--DVCCGTADWTISLSKAVGHTGEVI 78
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
+DFSENML + + T N+ LV D LPF D V G L P
Sbjct: 79 GVDFSENMLE-----VGKRKTKDMHNIQLVHGDAMNLPFEDNEFDYVTIGFGLRNVPDYL 133
Query: 250 NAVAEISRILRSGGVFV 266
+ E++R+L+ GG+ V
Sbjct: 134 ATLKELNRVLKPGGMIV 150
>sp|Q8CSH9|UBIE_STAES Demethylmenaquinone methyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVV 189
+SF + WR++ + +G +DV CG+ ++ +++ G+ V
Sbjct: 29 ISFEQHKVWRKHVMST----------MNVQKGSKALDVCCGTADWTIALSEAVGSKGQVT 78
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFSENML + + T N+ LV D LPF D V G L P
Sbjct: 79 GLDFSENMLE-----VGKQKTASLENIQLVHGDAMNLPFDDNSFDYVTIGFGLRNVPDYL 133
Query: 250 NAVAEISRILRSGGVFV 266
+A+ E+ R+L+ GG+ V
Sbjct: 134 SALKEMHRVLKPGGMVV 150
>sp|Q5HP74|UBIE_STAEQ Demethylmenaquinone methyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVV 189
+SF + WR++ + +G +DV CG+ ++ +++ G+ V
Sbjct: 29 ISFEQHKVWRKHVMST----------MNVQKGSKALDVCCGTADWTIALSEAVGSKGQVT 78
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFSENML + + T N+ LV D LPF D V G L P
Sbjct: 79 GLDFSENMLE-----VGKQKTASLENIQLVHGDAMNLPFDDNSFDYVTIGFGLRNVPDYL 133
Query: 250 NAVAEISRILRSGGVFV 266
+A+ E+ R+L+ GG+ V
Sbjct: 134 SALKEMHRVLKPGGMVV 150
>sp|O14321|ERG6_SCHPO Sterol 24-C-methyltransferase erg6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=erg6 PE=2 SV=1
Length = 378
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 19/195 (9%)
Query: 134 LYERGWRQNFNRSGFPGPD-------EEEYFKSAQGGL-----LVDVSCGSGLFSRKFAK 181
LYE GW Q+F+ S F + E++ + + G+ ++DV CG G +R+ +
Sbjct: 85 LYEYGWSQSFHFSRFYKGEAFAQSIARHEHYLAYRMGIKPGSRVLDVGCGVGGPAREITE 144
Query: 182 SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 241
T +V L+ ++ + +C ++ + N L V+ D +PF D V+A A
Sbjct: 145 F-TGCNLVGLNNNDYQISRCNNYAVKRN--LDKKQVFVKGDFMHMPFEDNTFDYVYAIEA 201
Query: 242 LHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE 301
PS EI R+L+ GGVF + S + + R + YN + I
Sbjct: 202 TVHAPSLEGVYGEIFRVLKPGGVF---GVYEWVMSDDYDSSIPKHREIA-YNIEVGDGIP 257
Query: 302 DLCTSCGLTNYTSKV 316
+ C KV
Sbjct: 258 QMVRKCDAVEAIKKV 272
>sp|Q5WGT4|UBIE_BACSK Demethylmenaquinone methyltransferase OS=Bacillus clausii (strain
KSM-K16) GN=ubiE PE=3 SV=1
Length = 235
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 36/207 (17%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVV 189
+S + WR+ D + G +DV CG+G ++ +++ G V+
Sbjct: 27 ISLQQHKSWRK----------DTMKQMDVQAGTSALDVCCGTGDWTLALSEAVGEQGSVI 76
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFSENML + + +N++LV + LP+ D V G L P
Sbjct: 77 GLDFSENMLAVGREKVAAAKR---TNISLVHGNAMALPYDDNTFDYVTIGFGLRNVPDYM 133
Query: 250 NAVAEISRILRSGG-------------VFVGTTFLRYTSSTSLTGRVLRERILQNYNYLT 296
+ E+ R+ + GG VF F + L G+V ++ + Y++L
Sbjct: 134 QVLQEMCRVAKPGGKIVCLETSQPTIPVFKQLYFFYFKRIMPLAGKVFAKK-YEEYSWLQ 192
Query: 297 E--------EEIEDLCTSCGLTNYTSK 315
E +++ D+ G+ + T K
Sbjct: 193 ESTLAFPGKDKLRDMFVEAGMKDVTVK 219
>sp|A0AK43|UBIE_LISW6 Demethylmenaquinone methyltransferase OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=ubiE PE=3 SV=1
Length = 236
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G ++DV CG+ +S A+ G V LDFSENML+ + +K+ + N+ L+
Sbjct: 47 KGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADL---HNVELI 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 263
+ LPF D V G L P + E+ R+L+ GG
Sbjct: 104 HGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|P67055|UBIE_LISMO Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=ubiE PE=3
SV=1
Length = 237
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G ++DV CG+ +S A+ G V LDFSENML+ + +K+ + N+ L+
Sbjct: 47 KGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADL---HNVELI 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 263
+ LPF D V G L P + E+ R+L+ GG
Sbjct: 104 HGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|Q71Y84|UBIE_LISMF Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=ubiE PE=3 SV=1
Length = 237
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G ++DV CG+ +S A+ G V LDFSENML+ + +K+ + N+ L+
Sbjct: 47 KGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADL---HNVELI 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 263
+ LPF D V G L P + E+ R+L+ GG
Sbjct: 104 HGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|C1KWN1|UBIE_LISMC Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4b (strain CLIP80459) GN=ubiE PE=3 SV=1
Length = 237
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G ++DV CG+ +S A+ G V LDFSENML+ + +K+ + N+ L+
Sbjct: 47 KGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADL---HNVELI 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 263
+ LPF D V G L P + E+ R+L+ GG
Sbjct: 104 HGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|P67056|UBIE_LISIN Demethylmenaquinone methyltransferase OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=ubiE PE=3 SV=1
Length = 237
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G ++DV CG+ +S A+ G V LDFSENML+ + +K+ + N+ L+
Sbjct: 47 KGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADL---HNVELI 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 263
+ LPF D V G L P + E+ R+L+ GG
Sbjct: 104 HGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|Q7W0H1|UBIE_BORPE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589
/ NCTC 13251) GN=ubiE PE=3 SV=1
Length = 258
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVR 220
G ++D++ G+G +R FAK SG V L D +E+MLR D LT + LV
Sbjct: 73 GMKVLDIAGGTGDLARAFAKRAGPSGEVWLTDINESMLRVGRDR-------LTDSGLLVP 125
Query: 221 ADVC---RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272
VC RLPF S + D V L A+AE++R+L+ GG + F R
Sbjct: 126 TAVCDAERLPFPSQYFDRVSVAFGLRNMTHKDRALAEMTRVLKPGGKLLVLEFSR 180
>sp|Q7W3N6|UBIE_BORPA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587
/ NCTC 13253) GN=ubiE PE=3 SV=1
Length = 258
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVR 220
G ++D++ G+G +R FAK SG V L D +E+MLR D LT + LV
Sbjct: 73 GMKVLDIAGGTGDLARAFAKRAGPSGEVWLTDINESMLRVGRDR-------LTDSGLLVP 125
Query: 221 ADVC---RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272
VC RLPF S + D V L A+AE++R+L+ GG + F R
Sbjct: 126 TAVCDAERLPFPSQYFDRVSVAFGLRNMTHKDRALAEMTRVLKPGGKLLVLEFSR 180
>sp|Q7WF12|UBIE_BORBR Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC
13252 / RB50) GN=ubiE PE=3 SV=1
Length = 258
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVR 220
G ++D++ G+G +R FAK SG V L D +E+MLR D LT + LV
Sbjct: 73 GMKVLDIAGGTGDLARAFAKRAGPSGEVWLTDINESMLRVGRDR-------LTDSGLLVP 125
Query: 221 ADVC---RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272
VC RLPF S + D V L A+AE++R+L+ GG + F R
Sbjct: 126 TAVCDAERLPFPSQYFDRVSVAFGLRNMTHKDRALAEMTRVLKPGGKLLVLEFSR 180
>sp|Q5ZT34|BIOC_LEGPH Malonyl-CoA O-methyltransferase BioC OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=bioC PE=3 SV=2
Length = 284
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 155 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS 214
+Y K A +L D+ CG G FS++ A + +V +D S ML Q +
Sbjct: 37 QYLKIAPRRIL-DLGCGPGFFSKELALLYPKAQIVGMDLSFAMLEQA-----RKKQGWRR 90
Query: 215 NLALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270
LV AD+ ++PFA+G D V A +H S E++R++ G + TT
Sbjct: 91 KWPLVSADMQKMPFATGAFDLVFANQVIHWSSSLGMVFRELNRVMNVNGCLMFTTL 146
>sp|Q8CWG0|UBIE_OCEIH Demethylmenaquinone methyltransferase OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=ubiE PE=3 SV=1
Length = 238
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 130 FVSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGV 188
+SF + WR+ D + G +DV CG+G +S +++ G V
Sbjct: 28 IISFQRHKSWRK----------DTMKRMNVQAGETALDVCCGTGDWSISLSEAVGQTGKV 77
Query: 189 VALDFSENMLRQCYDFIKQDNTILTSN-LALVRADVCRLPFASGFVDAVHAGAALHCWPS 247
+ LDFS+NML KQ L N L LV + LP+ D V G L P
Sbjct: 78 IGLDFSKNML----SIAKQKKQDLQLNQLELVHGNAMELPYEENSFDYVTIGFGLRNVPD 133
Query: 248 PSNAVAEISRILRSGGVFV 266
+ E+ R+++ GG V
Sbjct: 134 YMTVLEEMYRVVKPGGKVV 152
>sp|Q6CYB3|ERG6_KLULA Sterol 24-C-methyltransferase OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=ERG6 PE=3 SV=1
Length = 371
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 112 LKDYTEVKPASTELFRSPFVSFLYERGWRQNFNRSGFPGPD-------EEEYFKSAQGG- 163
L+DY E ST + + F YE GW +F+ S F + E++ + + G
Sbjct: 63 LEDYNE----STHSYYNVVTDF-YEYGWGSSFHFSRFFKGESFSASVARHEHYLAYKAGI 117
Query: 164 ----LLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
L++DV CG G +R ++ T ++ L+ ++ +++ + K+D+ L S L+ V
Sbjct: 118 KENDLILDVGCGVGGPARTISRF-TGCNIIGLNNNDYQIQKANYYAKRDH--LDSKLSFV 174
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVF 265
+ D ++ F D+V+A A P+ EI ++L+ GG F
Sbjct: 175 KGDFMKMEFDENTFDSVYAIEATCHAPTFEGVYGEIYKVLKPGGTF 220
>sp|Q9P3R1|ERG6_NEUCR Sterol 24-C-methyltransferase erg-4 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=erg-4 PE=3 SV=1
Length = 379
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 15/144 (10%)
Query: 134 LYERGWRQNFN-------RSGFPGPDEEEYFKSAQGGL-----LVDVSCGSGLFSRKFAK 181
+YE GW Q F+ S + E++ +AQ G+ ++DV CG G +R+ AK
Sbjct: 89 IYEYGWGQCFHFCRYSPGESFYQAIARHEHYLAAQIGIKKDMKVLDVGCGVGGPAREIAK 148
Query: 182 SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 241
T + + L+ ++ + + + +D L+ L V+ D ++ F DAV+A A
Sbjct: 149 F-TDAHITGLNNNDYQIDRATHYAVRDG--LSGQLKFVKGDFMQMSFPDNSFDAVYAIEA 205
Query: 242 LHCWPSPSNAVAEISRILRSGGVF 265
P EI R+L+ GG F
Sbjct: 206 TVHAPKLEGVYGEIYRVLKPGGTF 229
>sp|Q65I24|UBIE_BACLD Demethylmenaquinone methyltransferase OS=Bacillus licheniformis
(strain DSM 13 / ATCC 14580) GN=ubiE PE=3 SV=1
Length = 232
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G +DV CG+G ++ A + +G + LDFS+NML I + T S + L+
Sbjct: 47 KGATALDVCCGTGDWTIALADAAGETGEIKGLDFSKNMLS-----IAEQKTESYSQIELI 101
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
+ LPF D V G L P + E++R+++ GG V
Sbjct: 102 HGNAMELPFPDNTFDYVTIGFGLRNVPDYLTVLKEMARVVKPGGQVV 148
>sp|B8DBZ5|UBIE_LISMH Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4a (strain HCC23) GN=ubiE PE=3 SV=1
Length = 237
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 161 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
+G ++DV CG+ +S A+ G V LDFSENML+ + + + + N+ L+
Sbjct: 47 KGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVTEADL---HNVELI 103
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 263
+ LPF D V G L P + E+ R+L+ GG
Sbjct: 104 HGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|P49016|UBIE_LACLA Demethylmenaquinone methyltransferase OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=ubiE PE=3 SV=1
Length = 252
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 165 LVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 223
++D+ CG+G ++ ++S SG V+ LDFSENML + N+ ++ +
Sbjct: 57 ILDLCCGTGDWTFDLSESVGPSGKVIGLDFSENMLEIA---KAKLKEEAKKNIEFLQGNA 113
Query: 224 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV 266
LPF G D V G L P + EI R+L+ GG V
Sbjct: 114 MALPFEKGSFDVVTIGYGLRNTPDYLTVLKEIFRVLKPGGRVV 156
>sp|Q2SBD7|BIOC_HAHCH Malonyl-CoA O-methyltransferase BioC OS=Hahella chejuensis (strain
KCTC 2396) GN=bioC PE=3 SV=1
Length = 279
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 165 LVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 224
++DV CG+G + + S + + A D S M+ Y DN +A D+
Sbjct: 66 IIDVGCGTGWLTHRLKNSFPEARLCAYDLSPGMIE--YALAHHDNVAEIWAVA----DME 119
Query: 225 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVL 284
LP A+ D V + A+ P AE SR+LR GG + +T L T
Sbjct: 120 SLPVANASQDLVFSNMAMQWLDDPRAWFAEASRVLRPGGRLICSTLLTQTLFELEQAWHG 179
Query: 285 RERILQNYNYLTEEEIEDLCTSCGL 309
+ +L+ E++ + SCGL
Sbjct: 180 VDGGRHVNRFLSAEQVAEAAVSCGL 204
>sp|Q88SI6|UBIE_LACPL Demethylmenaquinone methyltransferase OS=Lactobacillus plantarum
(strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=ubiE PE=3
SV=1
Length = 237
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 17/152 (11%)
Query: 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLAL 218
A ++D+ CG+G ++ AK G V+ LDFS ML+ + Q + + L
Sbjct: 46 ASNAHVLDLCCGTGDWTIALAKELQAPGEVIGLDFSAPMLKLAQQKVTQQQ--VADRVWL 103
Query: 219 VRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFV-------GTTFL 271
R + LPF D V G L P + A+ EI R+L+ G V +
Sbjct: 104 RRGNAMHLPFKDNTFDLVTIGFGLRNLPDKAQALTEIYRVLKPGARLVCLETSQPDQPLI 163
Query: 272 R------YTSSTSLTGRVLRERILQNYNYLTE 297
+ +T L GR+ + Q Y+YL E
Sbjct: 164 KPVWQWYFTKVVPLFGRLFAHQY-QEYSYLQE 194
>sp|O86169|UBIE_GEOSE Demethylmenaquinone methyltransferase OS=Geobacillus
stearothermophilus GN=ubiE PE=3 SV=1
Length = 234
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVV 189
+SF WR++ R +G +DV CG+ ++ A++ G V
Sbjct: 27 ISFRRHLKWRKDVMRR----------MNVQKGKKALDVCCGTADWTIALAEAVGPEGKVY 76
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFSENML+ +K N+ L+ + +LPF D V G L P
Sbjct: 77 GLDFSENMLKVGEQKVKARGL---HNVKLIHGNAMQLPFPDNSFDYVTIGFGLRNVPDYM 133
Query: 250 NAVAEISRILRSGGVFV 266
+ E+ R+ + GG+ V
Sbjct: 134 TVLKEMHRVTKPGGITV 150
>sp|Q73AY2|UBIE_BACC1 Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain
ATCC 10987) GN=ubiE PE=3 SV=1
Length = 237
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVV 189
+SF + WR+ R P G +DV CG+ ++ A++ G VV
Sbjct: 27 ISFQRHKAWRKETMRIMDVKP----------GSKALDVCCGTADWTIALAEAVGEQGKVV 76
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFSENML ++ + + L+ + LPF D V G L P
Sbjct: 77 GLDFSENMLSVGKQKVE---ALQLKQVELLHGNAMELPFEDNTFDYVTIGFGLRNVPDYM 133
Query: 250 NAVAEISRILRSGG 263
+ + E++R+++ GG
Sbjct: 134 HVLKEMTRVVKPGG 147
>sp|B1HTA6|UBIE_LYSSC Demethylmenaquinone methyltransferase OS=Lysinibacillus sphaericus
(strain C3-41) GN=ubiE PE=3 SV=1
Length = 234
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 16/137 (11%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSG-VV 189
+SF GWR D ++ G +DV CG+ ++ A++ SG V
Sbjct: 27 ISFQMHIGWRN----------DTMKHMAVKPGSKALDVCCGTADWTIALAEAVGESGEVK 76
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFS+NML+ + + + L+ + LPF D V G L P
Sbjct: 77 GLDFSQNMLK-----VGEKKVQPYPQIELIHGNAMELPFPDDTFDYVTIGFGLRNVPDYL 131
Query: 250 NAVAEISRILRSGGVFV 266
+ E+ R+++ GG+ V
Sbjct: 132 QVLKEMHRVVKPGGMVV 148
>sp|P94298|UBIE_BACPE Demethylmenaquinone methyltransferase OS=Bacillus pseudofirmus
(strain OF4) GN=ubiE PE=3 SV=2
Length = 236
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 14/137 (10%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVV- 189
+SF + WR+ D + K G +DV CG+ ++ ++ ++G V
Sbjct: 27 ISFQRHKAWRK----------DTMKRMKVQPGDHALDVCCGTADWTIALGEAVGHNGKVE 76
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFS+NML + +K+ +++L + LP+A D V G L P
Sbjct: 77 GLDFSKNMLLIGEEKVKEHKM---KHVSLRHGNAMELPYADETFDVVTIGFGLRNVPDYM 133
Query: 250 NAVAEISRILRSGGVFV 266
+ E+ R+++ GG V
Sbjct: 134 QVLKEMHRVVKKGGKVV 150
>sp|E3G327|BIOC_ENTCS Malonyl-CoA O-methyltransferase BioC OS=Enterobacter cloacae
(strain SCF1) GN=bioC PE=3 SV=1
Length = 251
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 165 LVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 224
++D CG G SR + +G V ALD S ML + D+ V+AD+
Sbjct: 46 VLDAGCGPGGISRYWRDNGCE--VTALDLSAQMLAEARRQQAADH--------YVQADIE 95
Query: 225 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270
+P AS D V + A+ S +AV E+ R+LR GGV TT
Sbjct: 96 AIPLASAQFDLVWSNLAVQWCDSLQDAVQELYRMLRPGGVLAFTTL 141
>sp|Q74LY0|UBIE_LACJO Demethylmenaquinone methyltransferase OS=Lactobacillus johnsonii
(strain CNCM I-12250 / La1 / NCC 533) GN=ubiE PE=3 SV=1
Length = 244
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 15/150 (10%)
Query: 115 YTEVKPASTELFRSPFVSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGL 174
+T V P ++ + +S + GWR+ + K G +D+ CG+G
Sbjct: 20 FTRVAPHYDQM--NNLISLGTQNGWRKK----------FFKKLKVKAGDFALDLCCGTGD 67
Query: 175 FSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFV 233
+ AK G V+ LDF++ ML I+ N L + L + D LP+
Sbjct: 68 LTIALAKQVGPSGNVIGLDFNQKMLDLADKKIRGQN--LQKEIQLKQGDAMHLPYTDQSF 125
Query: 234 DAVHAGAALHCWPSPSNAVAEISRILRSGG 263
D V G L P + EI R+L+ G
Sbjct: 126 DIVTIGFGLRNVPDADQVLKEIYRVLKPDG 155
>sp|Q89AK7|BIOC_BUCBP Malonyl-CoA O-methyltransferase BioC OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=bioC PE=3 SV=1
Length = 247
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 165 LVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 224
++D CG+G FS+K+ + G + V ALDFS+NML + NT S + AD+
Sbjct: 44 ILDAGCGTGWFSKKWRQLG--NTVTALDFSKNML------LTAKNT--NSADYYLHADME 93
Query: 225 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269
+LP D + +L + A++E+ R+ + GG+ V +T
Sbjct: 94 QLPICDNIFDLSWSNLSLQWCNKFNKAISELCRVTKPGGMVVFST 138
>sp|Q5KXU0|UBIE_GEOKA Demethylmenaquinone methyltransferase OS=Geobacillus kaustophilus
(strain HTA426) GN=ubiE PE=3 SV=1
Length = 234
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVV 189
+SF WR++ R +G +DV CG+ ++ A++ G V
Sbjct: 27 ISFRRHLKWREDVMRR----------MNVQKGKRALDVCCGTADWAIALAEAVGPEGEVY 76
Query: 190 ALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS 249
LDFSENML+ +K N+ L+ + +LPF D V G L P
Sbjct: 77 GLDFSENMLKVGEQKVKARGL---GNVKLIHGNAMQLPFPDNSFDYVTIGFGLRNVPDYM 133
Query: 250 NAVAEISRILRSGGVFV 266
+ E+ R+ + GG+ V
Sbjct: 134 TVLKEMHRVTKPGGMTV 150
>sp|A4VGE5|UBIE_PSEU5 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudomonas stutzeri (strain A1501) GN=ubiE PE=3 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 161 QGGLLVDVSCGSGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219
G ++D++ G+G +R+F++ G VV D + +ML+ D K + + N+ V
Sbjct: 68 HGNRILDIAGGTGDLTRQFSRIVGPTGEVVLADINASMLKVGRD--KLLDKGVAGNVRFV 125
Query: 220 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTS 275
+AD +LPF + D V L +A+A + R+L+ GG + F + T+
Sbjct: 126 QADAEKLPFPDNYFDVVTIAFGLRNVTHKEDAIASMLRVLKPGGRLLVLEFSKPTN 181
>sp|Q2KUG1|UBIE_BORA1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bordetella avium (strain 197N) GN=ubiE PE=3 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVR 220
G ++D++ G+G +R FAK SG V L D +++MLR D + IL L
Sbjct: 71 GMKVLDIAGGTGDLARAFAKRAGPSGEVWLTDINDSMLRVGRDRLTDGGLILP----LAV 126
Query: 221 ADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272
D +LPF + D V L A+AE+ R+L+ GG + F R
Sbjct: 127 CDAEKLPFPDQYFDRVSVAFGLRNMTHKDRALAEMRRVLKPGGKLLVLEFSR 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,838,548
Number of Sequences: 539616
Number of extensions: 4734852
Number of successful extensions: 14159
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 458
Number of HSP's that attempted gapping in prelim test: 13866
Number of HSP's gapped (non-prelim): 555
length of query: 328
length of database: 191,569,459
effective HSP length: 118
effective length of query: 210
effective length of database: 127,894,771
effective search space: 26857901910
effective search space used: 26857901910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)