Query 020307
Match_columns 328
No_of_seqs 345 out of 3571
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 14:55:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020307.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020307hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e2x_A TCAB9; kijanose, tetron 99.9 2.1E-25 7E-30 210.2 9.4 160 157-326 103-266 (416)
2 4gek_A TRNA (CMO5U34)-methyltr 99.9 2.5E-23 8.7E-28 183.6 20.4 166 159-328 68-257 (261)
3 3dh0_A SAM dependent methyltra 99.9 3.6E-23 1.2E-27 177.5 19.1 159 157-328 33-193 (219)
4 3dlc_A Putative S-adenosyl-L-m 99.9 1.2E-23 4E-28 180.1 14.9 164 160-327 43-213 (219)
5 1vl5_A Unknown conserved prote 99.9 1E-22 3.6E-27 179.5 19.0 153 157-316 33-189 (260)
6 1xxl_A YCGJ protein; structura 99.9 2E-22 6.8E-27 175.6 18.5 153 157-316 17-173 (239)
7 3hnr_A Probable methyltransfer 99.9 1.6E-22 5.6E-27 173.6 17.1 162 157-328 41-212 (220)
8 3bus_A REBM, methyltransferase 99.9 5.9E-22 2E-26 175.8 20.8 157 157-316 57-215 (273)
9 2o57_A Putative sarcosine dime 99.9 4.1E-22 1.4E-26 179.1 20.0 155 158-316 79-233 (297)
10 3dtn_A Putative methyltransfer 99.9 5.8E-22 2E-26 171.8 20.3 164 159-328 42-226 (234)
11 1p91_A Ribosomal RNA large sub 99.9 2.3E-22 8E-27 178.1 15.2 175 61-273 3-182 (269)
12 2p7i_A Hypothetical protein; p 99.9 4.8E-22 1.6E-26 173.4 16.9 146 160-315 41-197 (250)
13 3ujc_A Phosphoethanolamine N-m 99.9 5.6E-22 1.9E-26 174.9 16.9 152 157-316 51-205 (266)
14 3kkz_A Uncharacterized protein 99.9 4.3E-21 1.5E-25 169.8 21.2 151 159-316 44-195 (267)
15 1nkv_A Hypothetical protein YJ 99.9 9.8E-22 3.3E-26 172.6 16.8 152 157-315 32-185 (256)
16 3f4k_A Putative methyltransfer 99.9 3.4E-21 1.2E-25 169.3 19.8 151 158-315 43-194 (257)
17 3jwg_A HEN1, methyltransferase 99.9 1.8E-21 6.2E-26 167.1 17.2 157 157-314 25-189 (219)
18 3vc1_A Geranyl diphosphate 2-C 99.9 2.8E-21 9.6E-26 175.1 19.1 152 159-316 115-268 (312)
19 3l8d_A Methyltransferase; stru 99.9 1.2E-21 4E-26 170.6 15.9 147 160-315 52-198 (242)
20 4htf_A S-adenosylmethionine-de 99.9 9.2E-22 3.1E-26 175.8 15.4 152 161-316 68-231 (285)
21 3mgg_A Methyltransferase; NYSG 99.9 1.5E-21 5.1E-26 173.5 16.5 155 159-316 35-197 (276)
22 3ocj_A Putative exported prote 99.9 1E-21 3.5E-26 177.3 15.6 167 159-328 116-304 (305)
23 3i9f_A Putative type 11 methyl 99.9 1.5E-21 5E-26 160.9 13.6 146 157-327 13-159 (170)
24 4fsd_A Arsenic methyltransfera 99.9 2.9E-21 1E-25 179.8 17.1 158 159-316 81-250 (383)
25 3jwh_A HEN1; methyltransferase 99.9 1.5E-21 5.1E-26 167.4 13.8 156 157-313 25-188 (217)
26 3h2b_A SAM-dependent methyltra 99.9 1.9E-21 6.4E-26 164.9 14.1 139 162-317 42-182 (203)
27 3g5l_A Putative S-adenosylmeth 99.9 6E-21 2.1E-25 167.4 17.5 152 157-315 40-214 (253)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.9 1.3E-21 4.4E-26 171.6 12.6 150 157-319 89-240 (254)
29 3sm3_A SAM-dependent methyltra 99.9 9.3E-21 3.2E-25 163.8 17.6 154 160-316 29-206 (235)
30 3e23_A Uncharacterized protein 99.9 2.8E-21 9.7E-26 164.9 14.0 137 160-316 42-181 (211)
31 3ou2_A SAM-dependent methyltra 99.9 1.2E-20 4.2E-25 161.3 17.4 158 159-326 44-214 (218)
32 3mcz_A O-methyltransferase; ad 99.9 2.8E-20 9.4E-25 171.3 20.7 166 158-328 175-349 (352)
33 3ccf_A Cyclopropane-fatty-acyl 99.9 1.1E-20 3.9E-25 168.2 17.2 147 156-315 52-208 (279)
34 3ege_A Putative methyltransfer 99.9 2.1E-21 7.3E-26 171.3 12.3 147 157-316 30-177 (261)
35 3gu3_A Methyltransferase; alph 99.9 1.1E-20 3.7E-25 168.9 16.9 155 158-317 19-190 (284)
36 1kpg_A CFA synthase;, cyclopro 99.9 2.6E-20 8.9E-25 166.5 19.2 154 157-316 60-227 (287)
37 2xvm_A Tellurite resistance pr 99.9 1.8E-20 6.2E-25 158.0 17.1 155 157-328 28-199 (199)
38 3dli_A Methyltransferase; PSI- 99.9 7E-21 2.4E-25 165.8 15.0 143 160-319 40-186 (240)
39 3i53_A O-methyltransferase; CO 99.9 2.9E-20 9.9E-25 169.8 19.7 162 160-327 168-331 (332)
40 1x19_A CRTF-related protein; m 99.9 4.8E-20 1.6E-24 170.2 21.3 166 157-328 186-359 (359)
41 3hem_A Cyclopropane-fatty-acyl 99.9 2.7E-20 9.4E-25 167.7 18.8 154 157-316 68-242 (302)
42 2p35_A Trans-aconitate 2-methy 99.9 1.5E-20 5.2E-25 165.2 16.7 147 157-312 29-185 (259)
43 1y8c_A S-adenosylmethionine-de 99.9 9.9E-21 3.4E-25 164.8 15.1 161 161-328 37-245 (246)
44 3bkw_A MLL3908 protein, S-aden 99.8 2.8E-20 9.6E-25 161.8 17.1 152 157-316 39-213 (243)
45 2aot_A HMT, histamine N-methyl 99.8 5.6E-21 1.9E-25 171.4 12.8 149 160-314 51-218 (292)
46 1vlm_A SAM-dependent methyltra 99.8 1.7E-20 5.9E-25 161.1 15.0 148 161-328 47-219 (219)
47 3gwz_A MMCR; methyltransferase 99.8 1.4E-19 4.7E-24 167.7 21.6 164 158-327 199-368 (369)
48 1pjz_A Thiopurine S-methyltran 99.8 7E-21 2.4E-25 161.8 11.5 144 158-315 19-174 (203)
49 3pfg_A N-methyltransferase; N, 99.8 3.9E-21 1.3E-25 169.7 10.3 158 160-328 49-249 (263)
50 2gs9_A Hypothetical protein TT 99.8 4.7E-20 1.6E-24 157.2 16.7 133 161-308 36-171 (211)
51 3bkx_A SAM-dependent methyltra 99.8 6.9E-20 2.4E-24 162.6 17.7 156 157-314 39-216 (275)
52 3lcc_A Putative methyl chlorid 99.8 3.9E-20 1.3E-24 160.5 15.1 139 161-316 66-206 (235)
53 2yqz_A Hypothetical protein TT 99.8 2E-20 6.8E-25 164.7 13.4 148 159-314 37-193 (263)
54 2ex4_A Adrenal gland protein A 99.8 1.2E-20 4E-25 164.5 11.7 145 161-317 79-225 (241)
55 3d2l_A SAM-dependent methyltra 99.8 1.6E-19 5.3E-24 157.1 17.6 160 161-328 33-243 (243)
56 2a14_A Indolethylamine N-methy 99.8 9.7E-21 3.3E-25 167.4 9.7 162 159-328 53-260 (263)
57 3e8s_A Putative SAM dependent 99.8 1.7E-20 5.8E-25 161.2 10.6 160 157-328 48-227 (227)
58 2fk8_A Methoxy mycolic acid sy 99.8 1.2E-19 4.2E-24 164.5 16.8 152 157-315 86-252 (318)
59 1qzz_A RDMB, aclacinomycin-10- 99.8 3.1E-19 1E-23 165.6 19.5 166 157-327 178-355 (374)
60 1tw3_A COMT, carminomycin 4-O- 99.8 3.6E-19 1.2E-23 164.3 19.6 167 157-328 179-356 (360)
61 2r3s_A Uncharacterized protein 99.8 2.1E-19 7E-24 164.2 17.7 165 160-328 164-335 (335)
62 2i62_A Nicotinamide N-methyltr 99.8 5.7E-20 2E-24 161.9 13.1 161 160-328 55-261 (265)
63 3bxo_A N,N-dimethyltransferase 99.8 5.5E-20 1.9E-24 159.5 12.7 158 160-328 39-239 (239)
64 3thr_A Glycine N-methyltransfe 99.8 1.6E-19 5.6E-24 161.7 15.4 114 157-272 53-178 (293)
65 2gb4_A Thiopurine S-methyltran 99.8 2.7E-19 9.1E-24 157.0 16.3 142 160-315 67-225 (252)
66 3g2m_A PCZA361.24; SAM-depende 99.8 1.3E-19 4.4E-24 163.1 14.2 164 161-327 82-291 (299)
67 1ve3_A Hypothetical protein PH 99.8 7.5E-20 2.6E-24 157.4 12.0 160 161-327 38-226 (227)
68 3dp7_A SAM-dependent methyltra 99.8 2.3E-19 8E-24 165.8 16.1 163 160-326 178-353 (363)
69 3cgg_A SAM-dependent methyltra 99.8 4.9E-19 1.7E-23 148.3 16.6 139 160-328 45-195 (195)
70 2ip2_A Probable phenazine-spec 99.8 6.5E-19 2.2E-23 160.9 18.7 160 163-327 169-333 (334)
71 3cc8_A Putative methyltransfer 99.8 4.1E-19 1.4E-23 152.8 16.4 143 160-316 31-184 (230)
72 4hg2_A Methyltransferase type 99.8 8.1E-20 2.8E-24 160.7 10.0 101 161-273 39-139 (257)
73 3lst_A CALO1 methyltransferase 99.8 7.8E-19 2.7E-23 161.4 16.3 162 158-327 181-347 (348)
74 1ri5_A MRNA capping enzyme; me 99.8 6.3E-19 2.2E-23 157.9 15.1 154 160-316 63-249 (298)
75 3m70_A Tellurite resistance pr 99.8 1.3E-18 4.4E-23 155.4 17.0 154 157-328 116-286 (286)
76 4a6d_A Hydroxyindole O-methylt 99.8 2.8E-18 9.7E-23 157.9 19.6 164 158-327 176-345 (353)
77 1fp1_D Isoliquiritigenin 2'-O- 99.8 1.1E-18 3.7E-23 161.8 16.1 155 160-327 208-372 (372)
78 1wzn_A SAM-dependent methyltra 99.8 2.4E-18 8.2E-23 150.6 17.3 161 160-328 40-250 (252)
79 3g5t_A Trans-aconitate 3-methy 99.8 1.9E-18 6.4E-23 155.4 16.3 147 160-309 35-196 (299)
80 2p8j_A S-adenosylmethionine-de 99.8 1.1E-19 3.6E-24 154.6 7.6 149 160-314 22-180 (209)
81 3g07_A 7SK snRNA methylphospha 99.8 2E-19 6.7E-24 161.4 9.6 152 161-314 46-266 (292)
82 2kw5_A SLR1183 protein; struct 99.8 1.1E-18 3.7E-23 147.7 13.3 139 160-315 29-169 (202)
83 3reo_A (ISO)eugenol O-methyltr 99.8 5.2E-18 1.8E-22 157.0 19.0 156 159-327 201-366 (368)
84 2g72_A Phenylethanolamine N-me 99.8 4.5E-19 1.5E-23 158.7 11.0 147 161-315 71-254 (289)
85 3p9c_A Caffeic acid O-methyltr 99.8 7.5E-18 2.6E-22 155.7 18.8 156 159-327 199-364 (364)
86 3ggd_A SAM-dependent methyltra 99.8 3.6E-18 1.2E-22 148.9 15.1 143 160-314 55-216 (245)
87 3e05_A Precorrin-6Y C5,15-meth 99.8 3.6E-17 1.2E-21 138.7 19.9 126 157-310 36-161 (204)
88 2qe6_A Uncharacterized protein 99.8 7.6E-18 2.6E-22 149.6 16.3 145 161-313 77-238 (274)
89 3grz_A L11 mtase, ribosomal pr 99.8 6.2E-18 2.1E-22 143.5 15.0 138 160-328 59-196 (205)
90 1fbn_A MJ fibrillarin homologu 99.8 2.2E-17 7.4E-22 142.9 18.5 148 157-328 70-228 (230)
91 3ofk_A Nodulation protein S; N 99.8 1.8E-18 6.3E-23 147.8 11.3 108 157-272 47-157 (216)
92 1fp2_A Isoflavone O-methyltran 99.8 6E-18 2.1E-22 155.7 15.4 155 160-327 187-352 (352)
93 2vdw_A Vaccinia virus capping 99.8 1.7E-18 6E-23 155.8 9.8 155 161-316 48-245 (302)
94 3mq2_A 16S rRNA methyltransfer 99.7 3.2E-18 1.1E-22 146.7 10.0 148 157-316 23-183 (218)
95 3htx_A HEN1; HEN1, small RNA m 99.7 2.7E-17 9.3E-22 161.6 17.1 155 157-314 717-895 (950)
96 2avn_A Ubiquinone/menaquinone 99.7 4.7E-18 1.6E-22 149.7 10.7 142 161-316 54-212 (260)
97 4df3_A Fibrillarin-like rRNA/T 99.7 2.9E-17 9.8E-22 141.3 15.1 150 157-326 73-230 (233)
98 1zg3_A Isoflavanone 4'-O-methy 99.7 2.1E-17 7.3E-22 152.3 15.3 154 160-327 192-358 (358)
99 3njr_A Precorrin-6Y methylase; 99.7 1.6E-16 5.5E-21 134.9 18.3 127 157-314 51-177 (204)
100 3hm2_A Precorrin-6Y C5,15-meth 99.7 5.8E-17 2E-21 134.0 15.2 129 157-314 21-150 (178)
101 3orh_A Guanidinoacetate N-meth 99.7 6.5E-19 2.2E-23 153.2 3.1 141 160-313 59-206 (236)
102 1xdz_A Methyltransferase GIDB; 99.7 3.8E-17 1.3E-21 142.2 14.2 129 160-315 69-200 (240)
103 2ld4_A Anamorsin; methyltransf 99.7 2.1E-17 7.1E-22 136.8 12.0 117 157-309 8-128 (176)
104 1nt2_A Fibrillarin-like PRE-rR 99.7 1E-16 3.6E-21 136.7 16.4 143 159-327 55-209 (210)
105 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.2E-16 4.1E-21 136.6 16.5 107 161-270 41-157 (214)
106 2nxc_A L11 mtase, ribosomal pr 99.7 5.5E-17 1.9E-21 142.5 14.6 136 160-327 119-254 (254)
107 1dus_A MJ0882; hypothetical pr 99.7 7.5E-17 2.6E-21 134.8 14.7 143 157-327 48-193 (194)
108 1yb2_A Hypothetical protein TA 99.7 6.2E-17 2.1E-21 143.8 13.7 128 157-315 106-235 (275)
109 2zfu_A Nucleomethylin, cerebra 99.7 4E-17 1.4E-21 139.4 11.8 125 159-327 65-190 (215)
110 3m33_A Uncharacterized protein 99.7 4.6E-17 1.6E-21 140.3 12.0 117 160-315 47-165 (226)
111 3p2e_A 16S rRNA methylase; met 99.7 1.2E-17 4.1E-22 144.1 8.2 148 160-316 23-184 (225)
112 3fpf_A Mtnas, putative unchara 99.7 1E-16 3.5E-21 142.1 14.3 108 155-270 116-223 (298)
113 1zx0_A Guanidinoacetate N-meth 99.7 4.5E-18 1.5E-22 147.7 5.0 106 160-271 59-172 (236)
114 2fca_A TRNA (guanine-N(7)-)-me 99.7 1.5E-16 5.2E-21 136.0 13.9 107 161-270 38-154 (213)
115 1l3i_A Precorrin-6Y methyltran 99.7 1.8E-16 6.2E-21 132.2 13.4 125 157-311 29-154 (192)
116 3evz_A Methyltransferase; NYSG 99.7 7.5E-16 2.6E-20 132.9 17.6 131 160-316 54-205 (230)
117 2pxx_A Uncharacterized protein 99.7 6.7E-17 2.3E-21 137.5 10.3 107 160-272 41-162 (215)
118 2yxd_A Probable cobalt-precorr 99.7 9.1E-16 3.1E-20 127.0 16.4 123 157-313 31-153 (183)
119 3mti_A RRNA methylase; SAM-dep 99.7 3.8E-16 1.3E-20 130.1 14.1 107 160-271 21-137 (185)
120 2ipx_A RRNA 2'-O-methyltransfe 99.7 4.8E-16 1.6E-20 134.6 14.9 150 157-327 73-231 (233)
121 3mb5_A SAM-dependent methyltra 99.7 3.5E-16 1.2E-20 137.2 13.2 128 157-314 89-219 (255)
122 3bgv_A MRNA CAP guanine-N7 met 99.7 2.3E-16 7.9E-21 142.7 12.4 154 161-316 34-231 (313)
123 3giw_A Protein of unknown func 99.7 2.4E-16 8.2E-21 138.2 12.0 146 161-313 78-243 (277)
124 2b3t_A Protein methyltransfera 99.7 1.1E-15 3.9E-20 135.7 16.0 141 160-327 108-275 (276)
125 3dxy_A TRNA (guanine-N(7)-)-me 99.7 4E-16 1.4E-20 133.8 12.3 108 161-271 34-152 (218)
126 2pwy_A TRNA (adenine-N(1)-)-me 99.7 5.3E-16 1.8E-20 136.0 13.3 128 157-314 92-221 (258)
127 3q87_B N6 adenine specific DNA 99.7 1.8E-15 6.3E-20 124.6 15.7 118 160-316 22-148 (170)
128 3lpm_A Putative methyltransfer 99.7 1.3E-15 4.4E-20 134.1 15.3 145 157-327 44-218 (259)
129 3id6_C Fibrillarin-like rRNA/T 99.7 3.7E-15 1.3E-19 128.4 17.7 151 157-328 72-231 (232)
130 3eey_A Putative rRNA methylase 99.7 9.1E-16 3.1E-20 129.1 12.7 112 159-272 20-142 (197)
131 3lbf_A Protein-L-isoaspartate 99.7 9.7E-16 3.3E-20 130.3 12.6 104 157-271 73-176 (210)
132 3fzg_A 16S rRNA methylase; met 99.7 3.6E-16 1.2E-20 128.9 9.5 150 160-327 48-197 (200)
133 1jsx_A Glucose-inhibited divis 99.6 2.2E-15 7.5E-20 127.7 14.1 121 161-314 65-185 (207)
134 3g89_A Ribosomal RNA small sub 99.6 7.7E-16 2.6E-20 134.7 11.4 129 160-315 79-210 (249)
135 3p9n_A Possible methyltransfer 99.6 1E-15 3.5E-20 128.1 11.4 110 160-273 43-157 (189)
136 3ckk_A TRNA (guanine-N(7)-)-me 99.6 9.5E-16 3.3E-20 133.0 11.5 109 160-271 45-170 (235)
137 2frn_A Hypothetical protein PH 99.6 5.1E-15 1.7E-19 131.7 15.3 130 160-313 124-253 (278)
138 1g8a_A Fibrillarin-like PRE-rR 99.6 1.9E-14 6.3E-19 123.9 18.4 147 159-327 71-226 (227)
139 4dzr_A Protein-(glutamine-N5) 99.6 2E-16 6.9E-21 134.4 5.8 130 160-316 29-191 (215)
140 3lec_A NADB-rossmann superfami 99.6 9E-15 3.1E-19 125.3 15.5 139 160-326 20-162 (230)
141 3bwc_A Spermidine synthase; SA 99.6 2.3E-15 8E-20 135.5 12.2 149 160-327 94-257 (304)
142 1o54_A SAM-dependent O-methylt 99.6 3.3E-15 1.1E-19 132.7 12.8 128 157-314 108-236 (277)
143 3iv6_A Putative Zn-dependent a 99.6 1.8E-15 6.3E-20 132.6 10.8 103 157-271 41-150 (261)
144 2fyt_A Protein arginine N-meth 99.6 4.7E-15 1.6E-19 135.6 13.8 106 157-266 60-168 (340)
145 4dcm_A Ribosomal RNA large sub 99.6 1E-14 3.5E-19 134.9 15.7 114 157-271 218-336 (375)
146 3uwp_A Histone-lysine N-methyl 99.6 1.9E-15 6.6E-20 138.9 9.7 115 157-273 169-292 (438)
147 3dmg_A Probable ribosomal RNA 99.6 7E-15 2.4E-19 136.2 13.6 105 161-271 233-342 (381)
148 3q7e_A Protein arginine N-meth 99.6 6.6E-15 2.3E-19 135.1 13.2 107 159-269 64-173 (349)
149 3gdh_A Trimethylguanosine synt 99.6 8E-17 2.7E-21 140.0 -0.0 142 160-316 77-218 (241)
150 2ozv_A Hypothetical protein AT 99.6 2.3E-14 7.8E-19 126.2 15.7 112 157-270 32-171 (260)
151 2vdv_E TRNA (guanine-N(7)-)-me 99.6 8.6E-15 2.9E-19 127.8 12.6 103 160-270 48-174 (246)
152 2b25_A Hypothetical protein; s 99.6 2.7E-15 9.3E-20 137.0 9.6 111 157-272 101-222 (336)
153 3gnl_A Uncharacterized protein 99.6 1.7E-14 5.7E-19 124.7 13.6 127 160-314 20-146 (244)
154 3u81_A Catechol O-methyltransf 99.6 1.4E-14 4.8E-19 124.3 13.2 112 157-271 54-172 (221)
155 2yxe_A Protein-L-isoaspartate 99.6 1.1E-14 3.7E-19 124.2 12.2 107 157-272 73-180 (215)
156 1dl5_A Protein-L-isoaspartate 99.6 8.6E-15 2.9E-19 132.6 11.9 106 157-271 71-177 (317)
157 1vbf_A 231AA long hypothetical 99.6 1.4E-14 4.9E-19 124.9 12.5 104 157-273 66-169 (231)
158 1i9g_A Hypothetical protein RV 99.6 1.2E-14 4.3E-19 129.0 12.4 108 157-271 95-205 (280)
159 2ift_A Putative methylase HI07 99.6 5.9E-15 2E-19 124.9 9.7 108 161-272 53-166 (201)
160 1af7_A Chemotaxis receptor met 99.6 7.8E-15 2.7E-19 129.7 10.5 108 161-268 105-251 (274)
161 3kr9_A SAM-dependent methyltra 99.6 4.6E-14 1.6E-18 120.7 14.9 133 160-321 14-150 (225)
162 3bzb_A Uncharacterized protein 99.6 3.9E-14 1.3E-18 126.1 14.6 138 160-315 78-235 (281)
163 2h00_A Methyltransferase 10 do 99.6 8.5E-15 2.9E-19 128.3 9.9 147 161-314 65-235 (254)
164 1ixk_A Methyltransferase; open 99.6 2.4E-14 8.1E-19 129.6 13.1 113 157-272 114-249 (315)
165 2pjd_A Ribosomal RNA small sub 99.6 1.3E-14 4.4E-19 132.9 11.2 107 159-271 194-305 (343)
166 3ntv_A MW1564 protein; rossman 99.6 1.2E-14 4.2E-19 125.7 10.5 110 157-271 67-178 (232)
167 1ej0_A FTSJ; methyltransferase 99.6 3.4E-14 1.2E-18 116.6 12.7 100 159-272 20-139 (180)
168 3r0q_C Probable protein argini 99.6 1.9E-14 6.5E-19 133.4 12.2 109 158-271 60-171 (376)
169 1g6q_1 HnRNP arginine N-methyl 99.5 2.9E-14 9.8E-19 129.8 12.5 106 158-267 35-143 (328)
170 2fpo_A Methylase YHHF; structu 99.5 2.1E-14 7.3E-19 121.5 10.9 107 161-272 54-163 (202)
171 2esr_A Methyltransferase; stru 99.5 7.7E-15 2.6E-19 121.2 7.8 110 160-273 30-142 (177)
172 1jg1_A PIMT;, protein-L-isoasp 99.5 2.3E-14 7.9E-19 124.1 10.9 106 157-273 87-193 (235)
173 1ws6_A Methyltransferase; stru 99.5 7.3E-15 2.5E-19 120.3 7.3 105 161-273 41-151 (171)
174 2fhp_A Methylase, putative; al 99.5 1.4E-14 4.7E-19 120.5 8.9 110 160-273 43-158 (187)
175 3hp7_A Hemolysin, putative; st 99.5 9.1E-15 3.1E-19 129.8 8.1 142 161-316 85-231 (291)
176 2y1w_A Histone-arginine methyl 99.5 5.5E-14 1.9E-18 129.0 12.9 149 157-310 46-202 (348)
177 4azs_A Methyltransferase WBDD; 99.5 8E-15 2.8E-19 143.0 7.7 108 161-273 66-177 (569)
178 2gpy_A O-methyltransferase; st 99.5 2.7E-14 9.1E-19 123.5 10.1 110 157-271 50-162 (233)
179 3tfw_A Putative O-methyltransf 99.5 2.9E-14 1E-18 124.6 10.4 110 158-272 60-173 (248)
180 3opn_A Putative hemolysin; str 99.5 1.5E-15 5.2E-20 131.3 1.9 143 161-316 37-183 (232)
181 3tma_A Methyltransferase; thum 99.5 1.5E-13 5E-18 126.4 14.8 131 157-316 199-338 (354)
182 1u2z_A Histone-lysine N-methyl 99.5 3.9E-14 1.3E-18 132.4 11.0 116 155-272 236-362 (433)
183 3duw_A OMT, O-methyltransferas 99.5 2.6E-14 8.9E-19 122.6 8.8 110 158-272 55-170 (223)
184 2yvl_A TRMI protein, hypotheti 99.5 1.4E-13 4.8E-18 119.8 13.5 106 157-271 87-192 (248)
185 1i1n_A Protein-L-isoaspartate 99.5 1.4E-13 4.9E-18 118.2 12.6 107 159-271 75-184 (226)
186 3c3p_A Methyltransferase; NP_9 99.5 8.3E-14 2.8E-18 118.4 10.3 106 159-270 54-161 (210)
187 3dr5_A Putative O-methyltransf 99.5 5.5E-14 1.9E-18 120.7 9.1 104 162-270 57-164 (221)
188 2bm8_A Cephalosporin hydroxyla 99.5 3.6E-14 1.2E-18 123.1 7.6 124 160-312 80-214 (236)
189 3adn_A Spermidine synthase; am 99.5 5.8E-13 2E-17 119.1 15.6 112 160-271 82-200 (294)
190 2igt_A SAM dependent methyltra 99.5 9.4E-14 3.2E-18 126.4 10.5 108 160-271 152-274 (332)
191 2pbf_A Protein-L-isoaspartate 99.5 1.8E-13 6E-18 117.7 11.3 107 159-271 78-195 (227)
192 3ajd_A Putative methyltransfer 99.5 1.7E-13 5.7E-18 121.6 11.3 114 157-273 79-215 (274)
193 1o9g_A RRNA methyltransferase; 99.5 5.4E-14 1.8E-18 122.9 7.4 108 161-270 51-215 (250)
194 3tr6_A O-methyltransferase; ce 99.5 5.4E-14 1.8E-18 120.7 7.3 110 158-272 61-177 (225)
195 2yxl_A PH0851 protein, 450AA l 99.5 6.7E-13 2.3E-17 125.8 15.3 114 156-272 254-392 (450)
196 3tm4_A TRNA (guanine N2-)-meth 99.5 8.3E-13 2.8E-17 122.2 15.6 133 159-320 215-357 (373)
197 2qm3_A Predicted methyltransfe 99.5 9.7E-13 3.3E-17 121.8 16.0 104 161-269 172-278 (373)
198 3a27_A TYW2, uncharacterized p 99.5 2.1E-13 7.2E-18 120.8 10.9 106 159-272 117-222 (272)
199 3gjy_A Spermidine synthase; AP 99.5 6.7E-13 2.3E-17 119.1 13.8 106 163-271 91-202 (317)
200 1iy9_A Spermidine synthase; ro 99.5 7.4E-13 2.5E-17 117.4 14.0 148 160-327 74-235 (275)
201 2plw_A Ribosomal RNA methyltra 99.5 1.1E-13 3.9E-18 116.5 8.0 98 160-271 21-156 (201)
202 3r3h_A O-methyltransferase, SA 99.5 2E-14 6.8E-19 125.2 3.3 110 158-272 57-173 (242)
203 1sui_A Caffeoyl-COA O-methyltr 99.5 1.3E-13 4.4E-18 120.4 8.3 108 158-270 76-191 (247)
204 1uir_A Polyamine aminopropyltr 99.4 6.8E-13 2.3E-17 119.9 13.2 111 160-270 76-196 (314)
205 3sso_A Methyltransferase; macr 99.4 4.9E-14 1.7E-18 129.2 5.7 98 161-271 216-326 (419)
206 1inl_A Spermidine synthase; be 99.4 7.9E-13 2.7E-17 118.5 13.3 109 160-270 89-206 (296)
207 4hc4_A Protein arginine N-meth 99.4 5.3E-13 1.8E-17 122.8 12.3 103 160-267 82-187 (376)
208 1r18_A Protein-L-isoaspartate( 99.4 2.4E-13 8.4E-18 116.9 9.2 106 159-271 82-196 (227)
209 3b3j_A Histone-arginine methyl 99.4 3.5E-13 1.2E-17 128.4 11.0 107 158-269 155-263 (480)
210 2hnk_A SAM-dependent O-methylt 99.4 2.4E-13 8.2E-18 118.0 7.9 110 157-271 56-183 (239)
211 1nv8_A HEMK protein; class I a 99.4 9.6E-13 3.3E-17 117.2 11.9 104 160-269 122-249 (284)
212 3cbg_A O-methyltransferase; cy 99.4 2.9E-13 9.9E-18 117.0 8.2 109 158-271 69-184 (232)
213 2pt6_A Spermidine synthase; tr 99.4 1.3E-12 4.5E-17 118.3 12.4 109 160-270 115-231 (321)
214 2avd_A Catechol-O-methyltransf 99.4 4.6E-13 1.6E-17 115.2 8.2 109 158-271 66-181 (229)
215 3k6r_A Putative transferase PH 99.4 5.4E-12 1.9E-16 111.4 14.7 129 160-312 124-252 (278)
216 1zq9_A Probable dimethyladenos 99.4 2.6E-13 8.9E-18 121.0 5.8 104 157-266 24-144 (285)
217 1mjf_A Spermidine synthase; sp 99.4 3.3E-12 1.1E-16 113.6 12.6 107 160-270 74-194 (281)
218 1xj5_A Spermidine synthase 1; 99.4 9.2E-13 3.1E-17 119.8 9.2 109 160-269 119-235 (334)
219 1ne2_A Hypothetical protein TA 99.4 6.8E-12 2.3E-16 105.6 13.8 95 160-269 50-146 (200)
220 3frh_A 16S rRNA methylase; met 99.4 2.9E-12 1E-16 109.4 11.3 147 160-327 104-251 (253)
221 1sqg_A SUN protein, FMU protei 99.4 4.2E-12 1.5E-16 119.6 13.5 113 156-272 241-377 (429)
222 3c3y_A Pfomt, O-methyltransfer 99.4 7.7E-13 2.6E-17 114.7 7.8 108 158-270 67-182 (237)
223 3lcv_B Sisomicin-gentamicin re 99.4 2.6E-12 8.8E-17 110.8 10.8 148 160-325 131-279 (281)
224 2o07_A Spermidine synthase; st 99.4 1E-12 3.5E-17 118.1 8.6 111 160-271 94-211 (304)
225 1wy7_A Hypothetical protein PH 99.4 1.8E-11 6.2E-16 103.4 15.8 123 159-313 47-171 (207)
226 2frx_A Hypothetical protein YE 99.4 5.3E-12 1.8E-16 120.1 13.4 118 157-277 111-254 (479)
227 2nyu_A Putative ribosomal RNA 99.4 1.1E-12 3.9E-17 109.8 7.8 99 160-272 21-148 (196)
228 2wa2_A Non-structural protein 99.3 3.6E-13 1.2E-17 119.3 4.0 103 160-271 81-195 (276)
229 2i7c_A Spermidine synthase; tr 99.3 1.5E-12 5E-17 116.0 8.0 111 160-270 77-193 (283)
230 3m6w_A RRNA methylase; rRNA me 99.3 2.5E-12 8.6E-17 121.3 9.9 112 157-272 97-232 (464)
231 2b2c_A Spermidine synthase; be 99.3 1.1E-12 3.7E-17 118.4 7.0 108 160-269 107-222 (314)
232 2oxt_A Nucleoside-2'-O-methylt 99.3 4.5E-13 1.5E-17 118.0 4.1 103 160-271 73-187 (265)
233 2cmg_A Spermidine synthase; tr 99.3 1.8E-12 6.1E-17 114.0 7.3 100 160-270 71-172 (262)
234 3m4x_A NOL1/NOP2/SUN family pr 99.3 3.2E-12 1.1E-16 120.5 9.1 114 156-272 100-237 (456)
235 2b78_A Hypothetical protein SM 99.3 3.8E-12 1.3E-16 118.2 9.4 110 160-272 211-334 (385)
236 3c0k_A UPF0064 protein YCCW; P 99.3 9.5E-12 3.2E-16 116.0 11.3 108 160-271 219-341 (396)
237 3dou_A Ribosomal RNA large sub 99.3 4.3E-12 1.5E-16 106.3 7.9 97 160-272 24-142 (191)
238 1wxx_A TT1595, hypothetical pr 99.3 7.6E-12 2.6E-16 116.1 9.0 107 161-272 209-328 (382)
239 2as0_A Hypothetical protein PH 99.3 4.6E-12 1.6E-16 118.1 7.6 109 161-272 217-338 (396)
240 2f8l_A Hypothetical protein LM 99.3 1.9E-11 6.6E-16 111.8 10.8 128 160-310 129-279 (344)
241 1qam_A ERMC' methyltransferase 99.2 3.2E-12 1.1E-16 111.3 4.6 102 157-265 26-142 (244)
242 2yx1_A Hypothetical protein MJ 99.2 3.9E-11 1.3E-15 109.4 11.3 101 160-272 194-294 (336)
243 3v97_A Ribosomal RNA large sub 99.2 1.6E-11 5.6E-16 122.0 8.4 109 160-271 538-659 (703)
244 4dmg_A Putative uncharacterize 99.2 5.5E-11 1.9E-15 110.4 11.4 106 161-272 214-329 (393)
245 2xyq_A Putative 2'-O-methyl tr 99.2 3.2E-11 1.1E-15 107.1 8.6 118 157-315 59-195 (290)
246 1uwv_A 23S rRNA (uracil-5-)-me 99.2 3.2E-10 1.1E-14 106.8 16.0 104 157-269 282-389 (433)
247 2p41_A Type II methyltransfera 99.2 3.2E-12 1.1E-16 114.8 2.0 103 160-272 81-194 (305)
248 1yub_A Ermam, rRNA methyltrans 99.2 1.9E-13 6.4E-18 119.2 -7.8 105 157-269 25-145 (245)
249 2jjq_A Uncharacterized RNA met 99.1 5.4E-10 1.8E-14 104.8 13.8 100 159-269 288-387 (425)
250 2h1r_A Dimethyladenosine trans 99.1 4.7E-11 1.6E-15 107.1 6.3 99 157-263 38-153 (299)
251 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.2E-09 4E-14 98.2 14.2 113 156-272 97-237 (309)
252 3gru_A Dimethyladenosine trans 99.1 3E-10 1E-14 101.2 10.0 78 157-241 46-123 (295)
253 2ih2_A Modification methylase 99.1 4.8E-10 1.6E-14 105.1 11.0 120 160-310 38-187 (421)
254 3k0b_A Predicted N6-adenine-sp 99.1 2.5E-10 8.6E-15 106.0 8.5 111 159-272 199-353 (393)
255 2okc_A Type I restriction enzy 99.0 4.2E-10 1.4E-14 106.5 9.3 115 155-271 165-309 (445)
256 3ldg_A Putative uncharacterize 99.0 1.2E-09 4E-14 101.1 11.1 109 160-271 193-345 (384)
257 3ldu_A Putative methylase; str 99.0 6.7E-10 2.3E-14 102.9 9.1 111 159-272 193-347 (385)
258 2qfm_A Spermine synthase; sper 99.0 6.5E-10 2.2E-14 100.9 8.5 111 160-271 187-316 (364)
259 2efj_A 3,7-dimethylxanthine me 99.0 4.8E-09 1.6E-13 96.3 14.1 148 162-314 53-289 (384)
260 3b5i_A S-adenosyl-L-methionine 99.0 7.1E-09 2.4E-13 95.1 14.5 155 161-315 52-296 (374)
261 3tqs_A Ribosomal RNA small sub 98.9 1.8E-09 6.3E-14 94.2 8.6 74 157-238 25-102 (255)
262 2dul_A N(2),N(2)-dimethylguano 98.9 1.3E-09 4.6E-14 100.5 8.1 102 161-269 47-164 (378)
263 3bt7_A TRNA (uracil-5-)-methyl 98.9 1.2E-09 3.9E-14 100.9 7.6 97 162-271 214-328 (369)
264 3axs_A Probable N(2),N(2)-dime 98.9 3E-09 1E-13 98.3 8.6 104 160-269 51-158 (392)
265 3fut_A Dimethyladenosine trans 98.9 3.6E-09 1.2E-13 93.1 8.2 75 157-240 43-118 (271)
266 1m6y_A S-adenosyl-methyltransf 98.9 2.9E-09 9.9E-14 95.2 7.0 80 157-240 22-106 (301)
267 2r6z_A UPF0341 protein in RSP 98.9 2.8E-09 9.7E-14 93.2 6.6 83 158-244 80-173 (258)
268 2qy6_A UPF0209 protein YFCK; s 98.8 5.4E-09 1.8E-13 91.3 6.9 141 161-327 60-246 (257)
269 1m6e_X S-adenosyl-L-methionnin 98.8 1.5E-08 5.2E-13 92.2 9.2 151 161-313 51-276 (359)
270 3o4f_A Spermidine synthase; am 98.8 6.6E-08 2.3E-12 85.4 12.8 113 159-271 81-200 (294)
271 2ar0_A M.ecoki, type I restric 98.8 1.1E-08 3.8E-13 98.7 8.2 115 155-272 163-315 (541)
272 3v97_A Ribosomal RNA large sub 98.7 3.7E-08 1.3E-12 97.9 10.7 111 160-272 189-350 (703)
273 3ftd_A Dimethyladenosine trans 98.7 5.8E-08 2E-12 84.4 9.3 81 157-245 27-107 (249)
274 3evf_A RNA-directed RNA polyme 98.7 3.4E-08 1.2E-12 85.7 7.2 107 160-272 73-187 (277)
275 3uzu_A Ribosomal RNA small sub 98.7 3.6E-08 1.2E-12 87.1 7.3 67 157-230 38-106 (279)
276 3cvo_A Methyltransferase-like 98.7 3.5E-07 1.2E-11 76.5 12.9 101 161-269 30-154 (202)
277 4gqb_A Protein arginine N-meth 98.7 8.2E-08 2.8E-12 93.4 10.3 101 161-266 357-464 (637)
278 3ll7_A Putative methyltransfer 98.6 3.2E-08 1.1E-12 91.7 6.2 74 161-239 93-170 (410)
279 3lkd_A Type I restriction-modi 98.6 6.1E-07 2.1E-11 86.4 14.8 113 159-272 219-361 (542)
280 3khk_A Type I restriction-modi 98.6 1.5E-07 5.2E-12 90.8 10.0 115 155-272 239-398 (544)
281 3ua3_A Protein arginine N-meth 98.6 1.1E-07 3.9E-12 92.4 8.8 101 162-266 410-531 (745)
282 1qyr_A KSGA, high level kasuga 98.6 2.2E-08 7.4E-13 87.3 3.4 66 157-229 17-82 (252)
283 2oyr_A UPF0341 protein YHIQ; a 98.6 4.6E-08 1.6E-12 85.3 5.3 105 156-263 81-194 (258)
284 4auk_A Ribosomal RNA large sub 98.5 2.6E-06 8.9E-11 77.3 15.3 123 159-311 209-334 (375)
285 4fzv_A Putative methyltransfer 98.4 1.4E-06 4.7E-11 79.5 11.3 130 156-285 143-300 (359)
286 3gcz_A Polyprotein; flavivirus 98.4 1.3E-07 4.5E-12 82.1 3.8 108 159-272 88-204 (282)
287 3s1s_A Restriction endonucleas 98.3 1.9E-06 6.6E-11 85.2 11.0 112 161-272 321-468 (878)
288 2wk1_A NOVP; transferase, O-me 98.2 2.3E-06 7.7E-11 75.4 7.7 130 160-312 105-267 (282)
289 3c6k_A Spermine synthase; sper 98.2 3.7E-06 1.2E-10 76.6 8.3 108 161-269 205-331 (381)
290 3eld_A Methyltransferase; flav 98.2 2.2E-06 7.6E-11 74.9 5.8 107 160-272 80-194 (300)
291 2jny_A Uncharacterized BCR; st 98.1 8.2E-07 2.8E-11 59.9 2.3 44 58-110 8-51 (67)
292 2jr6_A UPF0434 protein NMA0874 98.1 9.5E-07 3.3E-11 59.8 2.2 44 58-110 6-49 (68)
293 2vz8_A Fatty acid synthase; tr 98.1 5E-07 1.7E-11 101.0 1.1 147 161-314 1240-1392(2512)
294 2js4_A UPF0434 protein BB2007; 98.1 1E-06 3.4E-11 60.1 2.2 44 58-110 6-49 (70)
295 2hf1_A Tetraacyldisaccharide-1 98.1 9.2E-07 3.1E-11 59.9 1.7 44 58-110 6-49 (68)
296 2pk7_A Uncharacterized protein 98.1 1.1E-06 3.8E-11 59.7 2.1 44 58-110 6-49 (69)
297 1wg8_A Predicted S-adenosylmet 98.1 7.7E-06 2.6E-10 71.4 7.8 75 156-239 17-96 (285)
298 2k4m_A TR8_protein, UPF0146 pr 98.0 7E-06 2.4E-10 64.2 5.0 88 161-273 35-125 (153)
299 3lkz_A Non-structural protein 97.9 8.3E-05 2.8E-09 64.7 10.5 107 160-273 93-208 (321)
300 3ufb_A Type I restriction-modi 97.9 0.00019 6.4E-09 69.0 13.9 140 130-272 177-365 (530)
301 1rjd_A PPM1P, carboxy methyl t 97.8 0.00025 8.6E-09 64.0 13.2 152 157-310 93-281 (334)
302 2kpi_A Uncharacterized protein 97.8 8.7E-06 3E-10 52.9 2.4 42 58-110 8-51 (56)
303 3p8z_A Mtase, non-structural p 97.7 0.00018 6.2E-09 60.6 9.6 108 159-274 76-191 (267)
304 2px2_A Genome polyprotein [con 97.7 2.8E-05 9.5E-10 66.5 4.5 104 159-272 71-186 (269)
305 2k5r_A Uncharacterized protein 97.7 1.7E-05 5.8E-10 57.3 2.2 52 58-109 6-75 (97)
306 2zig_A TTHA0409, putative modi 97.6 0.00012 4.1E-09 65.1 7.5 47 160-208 234-280 (297)
307 3tka_A Ribosomal RNA small sub 97.4 0.00012 4.2E-09 65.3 5.1 80 155-241 51-137 (347)
308 3vyw_A MNMC2; tRNA wobble urid 97.4 0.0016 5.4E-08 57.6 11.9 139 162-327 97-259 (308)
309 2uyo_A Hypothetical protein ML 97.3 0.0022 7.5E-08 57.2 11.5 147 163-312 104-274 (310)
310 3r24_A NSP16, 2'-O-methyl tran 97.2 0.0011 3.9E-08 57.6 7.8 98 157-272 105-220 (344)
311 1i4w_A Mitochondrial replicati 97.0 0.0014 4.9E-08 59.3 7.0 60 161-226 58-117 (353)
312 1g60_A Adenine-specific methyl 96.8 0.0024 8.2E-08 55.4 6.7 47 160-208 211-257 (260)
313 3s2e_A Zinc-containing alcohol 96.3 0.014 4.7E-07 52.5 9.2 95 158-270 163-264 (340)
314 1pft_A TFIIB, PFTFIIBN; N-term 96.2 0.0032 1.1E-07 39.8 2.9 32 59-99 4-36 (50)
315 3qv2_A 5-cytosine DNA methyltr 96.2 0.096 3.3E-06 46.8 13.5 127 162-314 10-157 (327)
316 3two_A Mannitol dehydrogenase; 96.1 0.021 7.3E-07 51.4 9.1 94 158-271 173-267 (348)
317 3iei_A Leucine carboxyl methyl 96.0 0.31 1.1E-05 43.6 16.1 150 161-315 90-279 (334)
318 1kol_A Formaldehyde dehydrogen 96.0 0.035 1.2E-06 51.0 10.2 102 158-269 182-300 (398)
319 1f8f_A Benzyl alcohol dehydrog 95.9 0.021 7.1E-07 52.0 8.2 98 158-270 187-290 (371)
320 4eez_A Alcohol dehydrogenase 1 95.9 0.049 1.7E-06 48.9 10.6 98 158-270 160-264 (348)
321 2py6_A Methyltransferase FKBM; 95.7 0.031 1.1E-06 51.7 8.3 64 158-223 223-291 (409)
322 2dph_A Formaldehyde dismutase; 95.7 0.047 1.6E-06 50.2 9.5 102 158-269 182-299 (398)
323 3uog_A Alcohol dehydrogenase; 95.4 0.12 4E-06 46.8 11.2 98 157-271 185-289 (363)
324 1uuf_A YAHK, zinc-type alcohol 95.4 0.037 1.3E-06 50.4 7.7 94 158-270 191-289 (369)
325 3m6i_A L-arabinitol 4-dehydrog 95.2 0.18 6.1E-06 45.5 11.6 101 157-271 175-285 (363)
326 3tos_A CALS11; methyltransfera 95.2 0.054 1.9E-06 46.6 7.5 106 162-270 70-218 (257)
327 1rjw_A ADH-HT, alcohol dehydro 95.2 0.11 3.8E-06 46.4 10.0 95 158-270 161-262 (339)
328 4ej6_A Putative zinc-binding d 95.1 0.38 1.3E-05 43.6 13.6 98 157-271 178-286 (370)
329 1pqw_A Polyketide synthase; ro 95.1 0.048 1.6E-06 44.6 7.0 93 158-270 35-138 (198)
330 1e3j_A NADP(H)-dependent ketos 95.1 0.14 4.7E-06 46.1 10.5 97 158-270 165-272 (352)
331 2b5w_A Glucose dehydrogenase; 95.1 0.11 3.7E-06 46.9 9.9 90 163-271 174-275 (357)
332 3pvc_A TRNA 5-methylaminomethy 95.1 0.05 1.7E-06 53.9 8.0 128 161-315 58-231 (689)
333 1jvb_A NAD(H)-dependent alcoho 95.0 0.072 2.5E-06 47.9 8.5 96 158-270 167-272 (347)
334 1pl8_A Human sorbitol dehydrog 95.0 0.097 3.3E-06 47.2 9.2 98 157-270 167-274 (356)
335 3g7u_A Cytosine-specific methy 94.9 0.071 2.4E-06 48.7 8.1 70 163-241 3-80 (376)
336 3ip1_A Alcohol dehydrogenase, 94.9 0.13 4.3E-06 47.4 9.9 98 158-271 210-320 (404)
337 2oo3_A Protein involved in cat 94.9 0.0083 2.8E-07 52.3 1.7 108 158-272 88-201 (283)
338 3fpc_A NADP-dependent alcohol 94.9 0.056 1.9E-06 48.7 7.3 99 157-270 162-267 (352)
339 3ps9_A TRNA 5-methylaminomethy 94.9 0.061 2.1E-06 53.0 8.1 126 162-314 67-238 (676)
340 1g55_A DNA cytosine methyltran 94.8 0.035 1.2E-06 50.1 5.7 71 163-241 3-77 (343)
341 2h6e_A ADH-4, D-arabinose 1-de 94.7 0.078 2.7E-06 47.6 7.7 94 161-270 170-270 (344)
342 3goh_A Alcohol dehydrogenase, 94.6 0.048 1.6E-06 48.3 6.0 91 157-269 138-229 (315)
343 3uko_A Alcohol dehydrogenase c 94.4 0.12 4.2E-06 47.0 8.3 98 158-270 190-296 (378)
344 1v3u_A Leukotriene B4 12- hydr 94.3 0.11 3.7E-06 46.3 7.7 93 158-269 142-244 (333)
345 2c7p_A Modification methylase 94.3 0.74 2.5E-05 41.0 13.1 126 162-314 11-150 (327)
346 3gms_A Putative NADPH:quinone 94.2 0.092 3.1E-06 47.0 6.9 95 157-270 140-244 (340)
347 3jv7_A ADH-A; dehydrogenase, n 94.2 0.14 4.6E-06 46.0 8.0 97 158-270 168-271 (345)
348 2hcy_A Alcohol dehydrogenase 1 94.1 0.092 3.1E-06 47.2 6.9 95 158-270 166-270 (347)
349 1p0f_A NADP-dependent alcohol 94.1 0.18 6.1E-06 45.7 8.8 98 158-270 188-294 (373)
350 2zwa_A Leucine carboxyl methyl 94.1 1.2 4.2E-05 43.9 15.3 150 161-314 107-306 (695)
351 4b7c_A Probable oxidoreductase 94.0 0.13 4.6E-06 45.8 7.7 95 158-270 146-249 (336)
352 1cdo_A Alcohol dehydrogenase; 94.0 0.24 8.1E-06 44.9 9.5 95 158-270 189-295 (374)
353 2d8a_A PH0655, probable L-thre 94.0 0.17 5.9E-06 45.3 8.5 92 161-270 167-268 (348)
354 3qwb_A Probable quinone oxidor 94.0 0.15 5.2E-06 45.4 8.0 96 158-270 145-248 (334)
355 4dvj_A Putative zinc-dependent 93.9 0.18 6E-06 45.7 8.4 91 161-268 171-269 (363)
356 2jhf_A Alcohol dehydrogenase E 93.9 0.25 8.7E-06 44.7 9.4 96 158-269 188-293 (374)
357 1e3i_A Alcohol dehydrogenase, 93.9 0.26 8.9E-06 44.7 9.4 95 158-270 192-298 (376)
358 3nx4_A Putative oxidoreductase 93.8 0.25 8.7E-06 43.7 9.1 91 164-270 149-242 (324)
359 4a2c_A Galactitol-1-phosphate 93.8 0.43 1.5E-05 42.6 10.6 99 158-271 157-262 (346)
360 3q87_A Putative uncharacterize 93.8 0.02 7E-07 43.2 1.4 28 82-109 94-121 (125)
361 3jyn_A Quinone oxidoreductase; 93.7 0.18 6.1E-06 44.8 7.8 95 158-271 137-241 (325)
362 2cf5_A Atccad5, CAD, cinnamyl 93.6 0.094 3.2E-06 47.4 5.8 95 161-270 180-276 (357)
363 1boo_A Protein (N-4 cytosine-s 93.5 0.087 3E-06 47.0 5.4 48 159-208 250-297 (323)
364 2fzw_A Alcohol dehydrogenase c 93.5 0.26 8.8E-06 44.6 8.6 98 158-270 187-293 (373)
365 2zig_A TTHA0409, putative modi 93.4 0.12 4.1E-06 45.5 6.0 92 213-313 19-132 (297)
366 2cdc_A Glucose dehydrogenase g 93.3 0.39 1.3E-05 43.3 9.5 87 162-270 181-279 (366)
367 1vq8_Z 50S ribosomal protein L 93.3 0.021 7E-07 40.0 0.7 30 59-97 26-55 (83)
368 3j20_Y 30S ribosomal protein S 93.1 0.032 1.1E-06 35.0 1.3 33 56-97 15-47 (50)
369 3iht_A S-adenosyl-L-methionine 93.1 0.21 7.1E-06 39.2 6.1 99 162-271 41-149 (174)
370 2j3h_A NADP-dependent oxidored 93.0 0.29 9.9E-06 43.7 8.2 95 158-270 152-256 (345)
371 1yqd_A Sinapyl alcohol dehydro 93.0 0.12 4E-06 46.9 5.6 93 161-270 187-283 (366)
372 4eye_A Probable oxidoreductase 93.0 0.16 5.3E-06 45.6 6.3 94 158-269 156-257 (342)
373 1yb5_A Quinone oxidoreductase; 93.0 0.35 1.2E-05 43.5 8.6 93 158-269 167-269 (351)
374 1vj0_A Alcohol dehydrogenase, 92.9 0.19 6.3E-06 45.8 6.7 96 159-270 193-299 (380)
375 2k5c_A Uncharacterized protein 92.9 0.014 4.6E-07 39.9 -0.7 39 59-97 7-61 (95)
376 1piw_A Hypothetical zinc-type 92.9 0.089 3E-06 47.6 4.5 97 158-269 176-276 (360)
377 2c0c_A Zinc binding alcohol de 92.8 0.38 1.3E-05 43.4 8.7 96 158-270 160-262 (362)
378 1zkd_A DUF185; NESG, RPR58, st 92.8 0.38 1.3E-05 43.9 8.5 45 162-206 81-132 (387)
379 1eg2_A Modification methylase 92.6 0.16 5.5E-06 45.2 5.7 46 160-207 241-289 (319)
380 3fwz_A Inner membrane protein 92.5 2 7E-05 32.6 11.5 91 162-269 7-105 (140)
381 2eih_A Alcohol dehydrogenase; 92.4 0.51 1.7E-05 42.1 8.9 94 158-270 163-266 (343)
382 2qrv_A DNA (cytosine-5)-methyl 92.3 0.37 1.3E-05 42.3 7.6 72 160-239 14-90 (295)
383 3krt_A Crotonyl COA reductase; 92.3 0.51 1.8E-05 44.0 9.0 95 158-269 225-344 (456)
384 3fbg_A Putative arginate lyase 92.2 0.53 1.8E-05 42.1 8.8 90 161-268 150-247 (346)
385 1dl6_A Transcription factor II 92.2 0.071 2.4E-06 34.6 2.1 31 59-97 10-40 (58)
386 4eso_A Putative oxidoreductase 92.1 0.68 2.3E-05 39.4 9.0 101 161-270 7-139 (255)
387 1boo_A Protein (N-4 cytosine-s 92.0 0.27 9.3E-06 43.8 6.5 89 213-313 12-116 (323)
388 3oig_A Enoyl-[acyl-carrier-pro 92.0 1 3.6E-05 38.3 10.1 106 161-271 6-149 (266)
389 3tqh_A Quinone oxidoreductase; 91.9 0.51 1.7E-05 41.7 8.2 95 157-269 148-245 (321)
390 4dup_A Quinone oxidoreductase; 91.8 0.34 1.2E-05 43.5 7.1 94 158-270 164-266 (353)
391 4h0n_A DNMT2; SAH binding, tra 91.8 0.25 8.5E-06 44.3 6.0 126 163-315 4-147 (333)
392 3o26_A Salutaridine reductase; 91.6 1.7 5.7E-05 37.7 11.2 78 161-243 11-102 (311)
393 3o38_A Short chain dehydrogena 91.6 1.3 4.5E-05 37.6 10.3 79 161-244 21-113 (266)
394 2dq4_A L-threonine 3-dehydroge 91.4 0.2 6.8E-06 44.9 5.0 93 158-270 162-263 (343)
395 2vn8_A Reticulon-4-interacting 91.4 0.67 2.3E-05 41.9 8.6 93 159-269 181-280 (375)
396 3grk_A Enoyl-(acyl-carrier-pro 91.4 1.5 5.2E-05 38.1 10.6 105 160-271 29-171 (293)
397 3ioy_A Short-chain dehydrogena 91.3 1.7 5.7E-05 38.4 10.9 80 161-244 7-99 (319)
398 4a0s_A Octenoyl-COA reductase/ 91.2 0.92 3.1E-05 42.1 9.5 98 157-270 216-337 (447)
399 1qor_A Quinone oxidoreductase; 91.2 0.31 1.1E-05 43.2 6.0 93 158-270 137-240 (327)
400 2j8z_A Quinone oxidoreductase; 91.0 0.6 2.1E-05 41.9 7.7 94 158-270 159-262 (354)
401 1iz0_A Quinone oxidoreductase; 90.8 0.16 5.6E-06 44.5 3.8 92 159-270 123-219 (302)
402 2vhw_A Alanine dehydrogenase; 90.8 0.15 5.1E-06 46.5 3.6 102 160-269 166-268 (377)
403 3gaz_A Alcohol dehydrogenase s 90.7 0.67 2.3E-05 41.4 7.7 93 157-269 146-246 (343)
404 2akl_A PHNA-like protein PA012 90.7 0.13 4.5E-06 38.6 2.4 30 59-98 26-55 (138)
405 1wly_A CAAR, 2-haloacrylate re 90.5 0.61 2.1E-05 41.4 7.3 94 158-270 142-245 (333)
406 3pxx_A Carveol dehydrogenase; 90.4 1.8 6E-05 37.2 10.1 104 161-270 9-154 (287)
407 3jyw_9 60S ribosomal protein L 90.3 0.15 5.1E-06 34.4 2.2 30 59-97 25-54 (72)
408 4f3n_A Uncharacterized ACR, CO 90.3 0.53 1.8E-05 43.5 6.7 46 162-207 138-188 (432)
409 3ggo_A Prephenate dehydrogenas 90.2 1.8 6.1E-05 38.2 9.9 92 162-267 33-126 (314)
410 1tt7_A YHFP; alcohol dehydroge 90.1 0.41 1.4E-05 42.5 5.8 95 160-270 148-248 (330)
411 3tjr_A Short chain dehydrogena 90.1 1.5 5.2E-05 38.2 9.4 78 160-243 29-119 (301)
412 2zb4_A Prostaglandin reductase 89.7 0.96 3.3E-05 40.5 8.0 95 158-270 155-261 (357)
413 1pjc_A Protein (L-alanine dehy 89.7 0.25 8.5E-06 44.7 4.0 101 161-270 166-268 (361)
414 3ijr_A Oxidoreductase, short c 89.6 3.1 0.00011 36.0 11.0 104 161-270 46-183 (291)
415 1h2b_A Alcohol dehydrogenase; 89.6 1.4 4.7E-05 39.6 8.9 95 158-270 183-286 (359)
416 2k4x_A 30S ribosomal protein S 89.5 0.24 8.1E-06 31.6 2.6 34 55-97 13-46 (55)
417 4fs3_A Enoyl-[acyl-carrier-pro 89.4 3.2 0.00011 35.2 10.7 106 161-271 5-148 (256)
418 1qyp_A RNA polymerase II; tran 89.3 0.14 4.8E-06 33.0 1.5 38 59-98 14-54 (57)
419 3ius_A Uncharacterized conserv 89.2 5.4 0.00018 33.9 12.2 70 163-248 6-79 (286)
420 3is3_A 17BETA-hydroxysteroid d 89.0 3.3 0.00011 35.3 10.6 105 161-271 17-154 (270)
421 2eez_A Alanine dehydrogenase; 89.0 0.26 8.9E-06 44.7 3.6 101 160-269 164-266 (369)
422 3ubt_Y Modification methylase 88.9 5.1 0.00018 35.2 12.1 125 164-314 2-140 (331)
423 1xa0_A Putative NADPH dependen 88.8 0.38 1.3E-05 42.6 4.6 95 160-270 147-247 (328)
424 4fgs_A Probable dehydrogenase 88.8 2.4 8.3E-05 36.6 9.5 102 160-270 27-160 (273)
425 3k31_A Enoyl-(acyl-carrier-pro 88.8 1.8 6.1E-05 37.7 8.8 104 161-271 29-170 (296)
426 3gaf_A 7-alpha-hydroxysteroid 88.8 2.2 7.5E-05 36.1 9.2 78 161-244 11-101 (256)
427 3r3s_A Oxidoreductase; structu 88.6 2.8 9.5E-05 36.4 9.9 105 161-271 48-187 (294)
428 3ek2_A Enoyl-(acyl-carrier-pro 88.6 3 0.0001 35.3 10.0 105 159-270 11-154 (271)
429 1twf_L ABC10-alpha, DNA-direct 88.5 0.21 7.2E-06 33.6 1.9 29 59-97 27-55 (70)
430 3tsc_A Putative oxidoreductase 88.4 3.5 0.00012 35.2 10.4 78 161-244 10-113 (277)
431 3v2g_A 3-oxoacyl-[acyl-carrier 88.4 3.8 0.00013 35.0 10.6 104 161-270 30-166 (271)
432 3j21_i 50S ribosomal protein L 88.0 0.15 5.2E-06 35.4 1.0 30 59-97 34-63 (83)
433 2j6a_A Protein TRM112; transla 87.9 0.15 5.2E-06 39.2 1.1 28 83-110 105-132 (141)
434 3f9i_A 3-oxoacyl-[acyl-carrier 87.8 4.6 0.00016 33.7 10.6 75 160-243 12-95 (249)
435 3me5_A Cytosine-specific methy 87.8 2.4 8.2E-05 39.8 9.4 59 162-226 88-146 (482)
436 1wma_A Carbonyl reductase [NAD 87.8 1.2 4.1E-05 37.8 6.9 102 161-269 3-138 (276)
437 3t7c_A Carveol dehydrogenase; 87.8 5.1 0.00018 34.7 11.2 78 160-243 26-128 (299)
438 2gdz_A NAD+-dependent 15-hydro 87.6 3.8 0.00013 34.7 10.0 106 161-270 6-140 (267)
439 3edm_A Short chain dehydrogena 87.6 1.3 4.4E-05 37.7 7.0 104 161-270 7-144 (259)
440 3gqv_A Enoyl reductase; medium 87.5 2.2 7.5E-05 38.4 8.8 93 160-269 163-263 (371)
441 4egf_A L-xylulose reductase; s 87.5 3 0.0001 35.5 9.3 79 161-244 19-110 (266)
442 3j21_g 50S ribosomal protein L 87.5 0.22 7.6E-06 31.1 1.4 26 59-97 13-38 (51)
443 3h0g_L DNA-directed RNA polyme 87.3 0.39 1.3E-05 31.5 2.6 32 59-100 20-51 (63)
444 4g81_D Putative hexonate dehyd 87.2 3.9 0.00013 34.9 9.7 105 161-271 8-147 (255)
445 3c85_A Putative glutathione-re 87.2 2.6 8.8E-05 33.5 8.2 91 162-269 39-139 (183)
446 3lf2_A Short chain oxidoreduct 87.2 6.3 0.00022 33.3 11.2 79 161-243 7-98 (265)
447 3gvc_A Oxidoreductase, probabl 87.1 3.6 0.00012 35.3 9.6 75 161-244 28-115 (277)
448 3iz5_m 60S ribosomal protein L 87.1 0.18 6.3E-06 35.6 1.0 30 59-97 35-64 (92)
449 4imr_A 3-oxoacyl-(acyl-carrier 87.0 3.2 0.00011 35.6 9.2 76 161-242 32-119 (275)
450 3uve_A Carveol dehydrogenase ( 86.8 4.8 0.00016 34.5 10.4 77 161-243 10-115 (286)
451 1xg5_A ARPG836; short chain de 86.8 9.5 0.00033 32.4 12.2 79 161-243 31-122 (279)
452 3llv_A Exopolyphosphatase-rela 86.8 1.7 5.8E-05 32.9 6.6 90 162-269 6-103 (141)
453 4e6p_A Probable sorbitol dehyd 86.6 3.5 0.00012 34.9 9.2 74 161-243 7-93 (259)
454 4da9_A Short-chain dehydrogena 86.5 5.5 0.00019 34.1 10.5 77 160-242 27-117 (280)
455 2jne_A Hypothetical protein YF 86.4 0.31 1.1E-05 34.6 1.8 26 61-97 33-58 (101)
456 3cc2_Z 50S ribosomal protein L 86.4 0.18 6.2E-06 37.2 0.7 30 59-97 59-88 (116)
457 1lss_A TRK system potassium up 86.2 5.7 0.0002 29.5 9.4 89 162-267 4-100 (140)
458 1gh9_A 8.3 kDa protein (gene M 86.2 0.27 9.1E-06 33.2 1.4 31 60-101 4-34 (71)
459 3f1l_A Uncharacterized oxidore 86.1 6.3 0.00022 33.1 10.5 77 161-242 11-102 (252)
460 3swr_A DNA (cytosine-5)-methyl 86.0 4.8 0.00016 41.3 11.0 55 161-223 539-593 (1002)
461 3izc_m 60S ribosomal protein R 85.9 0.22 7.4E-06 35.2 0.9 30 59-97 35-64 (92)
462 3t4x_A Oxidoreductase, short c 85.9 5.4 0.00018 33.8 10.1 80 161-244 9-97 (267)
463 1tfi_A Transcriptional elongat 85.7 0.3 1E-05 30.5 1.3 38 58-97 7-47 (50)
464 3pgx_A Carveol dehydrogenase; 85.4 6 0.0002 33.8 10.2 79 160-244 13-117 (280)
465 3p2y_A Alanine dehydrogenase/p 85.4 0.24 8.1E-06 45.1 1.1 96 161-268 183-301 (381)
466 4dio_A NAD(P) transhydrogenase 85.4 0.48 1.6E-05 43.5 3.1 98 161-269 189-312 (405)
467 4a17_Y RPL37A, 60S ribosomal p 85.3 0.19 6.6E-06 36.1 0.4 30 59-97 35-64 (103)
468 3u5t_A 3-oxoacyl-[acyl-carrier 85.3 4.1 0.00014 34.7 9.0 104 161-270 26-162 (267)
469 1xhl_A Short-chain dehydrogena 85.3 4.3 0.00015 35.2 9.2 80 161-243 25-117 (297)
470 3l77_A Short-chain alcohol deh 85.2 6 0.00021 32.6 9.9 79 162-245 2-93 (235)
471 1ja9_A 4HNR, 1,3,6,8-tetrahydr 85.0 1.9 6.6E-05 36.5 6.8 76 161-243 20-110 (274)
472 1ffk_W Ribosomal protein L37AE 84.9 0.24 8.4E-06 33.5 0.7 30 59-97 26-55 (73)
473 3l9w_A Glutathione-regulated p 84.7 3.7 0.00013 37.7 8.8 94 162-272 4-105 (413)
474 2jrp_A Putative cytoplasmic pr 84.5 0.44 1.5E-05 32.9 1.8 13 61-73 3-15 (81)
475 3sx2_A Putative 3-ketoacyl-(ac 84.3 4.3 0.00015 34.6 8.7 104 161-270 12-158 (278)
476 4dcm_A Ribosomal RNA large sub 84.2 3.9 0.00013 37.0 8.6 102 161-272 38-139 (375)
477 3ce6_A Adenosylhomocysteinase; 84.0 1.3 4.4E-05 41.8 5.5 89 160-269 272-361 (494)
478 1l7d_A Nicotinamide nucleotide 83.9 0.6 2E-05 42.6 3.1 43 160-203 170-213 (384)
479 1x13_A NAD(P) transhydrogenase 83.9 0.5 1.7E-05 43.4 2.6 43 160-203 170-213 (401)
480 2f1k_A Prephenate dehydrogenas 83.2 5.1 0.00018 34.2 8.7 85 164-266 2-88 (279)
481 1geg_A Acetoin reductase; SDR 82.9 5.1 0.00018 33.7 8.5 75 162-242 2-89 (256)
482 1g0o_A Trihydroxynaphthalene r 82.8 7.1 0.00024 33.3 9.5 104 161-270 28-164 (283)
483 3e8x_A Putative NAD-dependent 82.3 6.5 0.00022 32.4 8.8 76 160-248 19-100 (236)
484 3oid_A Enoyl-[acyl-carrier-pro 82.3 11 0.00036 31.8 10.3 77 161-243 3-93 (258)
485 1zcj_A Peroxisomal bifunctiona 82.1 6.1 0.00021 36.8 9.3 95 162-267 37-148 (463)
486 1zsy_A Mitochondrial 2-enoyl t 82.0 7.3 0.00025 34.7 9.6 95 158-269 164-270 (357)
487 2x9g_A PTR1, pteridine reducta 81.9 7.6 0.00026 33.3 9.4 77 161-242 22-116 (288)
488 3rwb_A TPLDH, pyridoxal 4-dehy 81.9 5.3 0.00018 33.5 8.2 75 161-244 5-92 (247)
489 4fn4_A Short chain dehydrogena 81.9 6.3 0.00022 33.5 8.6 76 161-242 6-94 (254)
490 1gee_A Glucose 1-dehydrogenase 81.7 6.3 0.00022 33.0 8.7 77 161-243 6-96 (261)
491 3po3_S Transcription elongatio 81.7 1 3.4E-05 36.3 3.2 41 57-97 134-175 (178)
492 3b1f_A Putative prephenate deh 81.6 6.4 0.00022 33.8 8.8 89 163-266 7-98 (290)
493 3pi7_A NADH oxidoreductase; gr 81.4 2 7E-05 38.2 5.6 88 163-269 166-263 (349)
494 2a4k_A 3-oxoacyl-[acyl carrier 81.1 7.2 0.00025 33.0 8.8 101 161-270 5-137 (263)
495 4dmm_A 3-oxoacyl-[acyl-carrier 81.1 9.1 0.00031 32.5 9.5 78 161-244 27-118 (269)
496 1spx_A Short-chain reductase f 81.0 3.2 0.00011 35.4 6.6 79 161-242 5-96 (278)
497 3ksu_A 3-oxoacyl-acyl carrier 81.0 5.7 0.0002 33.6 8.1 104 161-270 10-148 (262)
498 1jdq_A TM006 protein, hypothet 80.8 8.6 0.00029 27.4 7.7 58 246-325 37-96 (98)
499 1cyd_A Carbonyl reductase; sho 80.4 23 0.00077 29.1 11.7 72 161-243 6-87 (244)
500 2km1_A Protein DRE2; yeast, an 80.4 1.6 5.5E-05 33.3 3.8 40 228-267 55-96 (136)
No 1
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.92 E-value=2.1e-25 Score=210.20 Aligned_cols=160 Identities=12% Similarity=0.187 Sum_probs=120.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++ +.. .....+...+...+|+++++||+|
T Consensus 103 ~~~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~----~~~-~~~~~~~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 103 ELTGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREK----GIR-VRTDFFEKATADDVRRTEGPANVI 175 (416)
T ss_dssp TTCSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTT----TCC-EECSCCSHHHHHHHHHHHCCEEEE
T ss_pred hCCCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHc----CCC-cceeeechhhHhhcccCCCCEEEE
Confidence 4445788999999999999999999876 999999999999999874 100 001112234455566778899999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
++.++++|++|+..+|+++.++|||||++++.+++...... ...+......|..+++.+++.++++++||++++...
T Consensus 176 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 176 YAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVA---KTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp EEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHH---HTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred EECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhh---hcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 99999999999999999999999999999998876421000 000111224788899999999999999999988655
Q ss_pred ----eCcEEEEEEe
Q 020307 317 ----QQSFIMFAAQ 326 (328)
Q Consensus 317 ----~~~~~~~~a~ 326 (328)
.+.+.++.++
T Consensus 253 ~~~~~g~l~~~~~~ 266 (416)
T 4e2x_A 253 LPVHGGEVRYTLAR 266 (416)
T ss_dssp ECGGGSEEEEEEEE
T ss_pred ccCCCCEEEEEEEe
Confidence 3444555444
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.91 E-value=2.5e-23 Score=183.59 Aligned_cols=166 Identities=14% Similarity=0.180 Sum_probs=130.9
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhC--CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSG--TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
..++.+|||+|||+|.++..+++.. ++.+|+|+|+|+.|++.|++++...+. ..++.++++|+.++|++ .||+|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~--~~~v~~~~~D~~~~~~~--~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA--PTPVDVIEGDIRDIAIE--NASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEEEESCTTTCCCC--SEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc--CceEEEeeccccccccc--ccccc
Confidence 3578899999999999999999874 456899999999999999999887654 56899999999998864 69999
Q ss_pred EeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCC--cchhhHHHHH-----------------hhhccCCCC
Q 020307 237 HAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSS--TSLTGRVLRE-----------------RILQNYNYL 295 (328)
Q Consensus 237 ~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~-----------------~~~~~~~~~ 295 (328)
++..+++|++++ ..+|++++++|||||++++.+....... .......+.. ........+
T Consensus 144 ~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 144 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 999999999866 4689999999999999999987654211 0111111100 001234567
Q ss_pred CHHHHHHHHHHCCCeEEEEEE-eCcEEEEEEeCC
Q 020307 296 TEEEIEDLCTSCGLTNYTSKV-QQSFIMFAAQKP 328 (328)
Q Consensus 296 ~~~~l~~ll~~~Gf~~v~~~~-~~~~~~~~a~k~ 328 (328)
+.+++.++|+++||+.++.+. ...|..++|+|+
T Consensus 224 s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K~ 257 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSELWFQCFNFGSLVALKA 257 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEEEEEETTEEEEEEECC
T ss_pred CHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEEc
Confidence 899999999999999888643 567888999986
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.91 E-value=3.6e-23 Score=177.54 Aligned_cols=159 Identities=15% Similarity=0.202 Sum_probs=135.8
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++.+ +..+++|+|+|+.+++.+++++...+ ..++.++.+|+..+++++++||+
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~~fD~ 109 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG---LKNVEVLKSEENKIPLPDNTVDF 109 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECBTTBCSSCSSCEEE
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEecccccCCCCCCCeeE
Confidence 445678899999999999999999985 56699999999999999999988765 45899999999999988899999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
|++..+++|++++..+++++.++|||||++++.++....... ...+...++.+++.++++++||++++..
T Consensus 110 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 110 IFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK----------GPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS----------SCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc----------CCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 999999999999999999999999999999999977653211 1134567899999999999999988865
Q ss_pred E-eCcEEEEEEeCC
Q 020307 316 V-QQSFIMFAAQKP 328 (328)
Q Consensus 316 ~-~~~~~~~~a~k~ 328 (328)
. ...++.++++|+
T Consensus 180 ~~~~~~~~~~~~k~ 193 (219)
T 3dh0_A 180 EVGKYCFGVYAMIV 193 (219)
T ss_dssp EETTTEEEEEEECC
T ss_pred eeCCceEEEEEEec
Confidence 4 456677777774
No 4
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.91 E-value=1.2e-23 Score=180.07 Aligned_cols=164 Identities=22% Similarity=0.313 Sum_probs=131.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++ +|||+|||+|.++..+++. +..+++|+|+|+.+++.+++++...+. ..++.++.+|+.++++++++||+|++.
T Consensus 43 ~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~D~v~~~ 118 (219)
T 3dlc_A 43 TAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANL--NDRIQIVQGDVHNIPIEDNYADLIVSR 118 (219)
T ss_dssp CEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECBTTBCSSCTTCEEEEEEE
T ss_pred CCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccc--cCceEEEEcCHHHCCCCcccccEEEEC
Confidence 344 9999999999999999998 556999999999999999999887664 468999999999999989999999999
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHH-------HhhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLR-------ERILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
.+++|++++..+++++.++|||||++++.++.............+. .....+...++.+++.++++++||+++
T Consensus 119 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 198 (219)
T 3dlc_A 119 GSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSY 198 (219)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSE
T ss_pred chHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeE
Confidence 9999999999999999999999999999886544211111111111 111245667788999999999999998
Q ss_pred EEEEeCcEEEEEEeC
Q 020307 313 TSKVQQSFIMFAAQK 327 (328)
Q Consensus 313 ~~~~~~~~~~~~a~k 327 (328)
+.........++.+|
T Consensus 199 ~~~~~~~~~~~~~~k 213 (219)
T 3dlc_A 199 EIILGDEGFWIIISK 213 (219)
T ss_dssp EEEEETTEEEEEEBC
T ss_pred EEEecCCceEEEEec
Confidence 876655554445554
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.90 E-value=1e-22 Score=179.48 Aligned_cols=153 Identities=20% Similarity=0.288 Sum_probs=127.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.++ +|+|+|+|+.+++.|++++...+ .+++.++.+|+..+|+++++||+|
T Consensus 33 l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~~~fD~V 107 (260)
T 1vl5_A 33 AALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNG---HQQVEYVQGDAEQMPFTDERFHIV 107 (260)
T ss_dssp HTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCC-CCCSCTTCEEEE
T ss_pred hCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEecHHhCCCCCCCEEEE
Confidence 4455788999999999999999999876 99999999999999999987765 458999999999999989999999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH----hhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE----RILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
++..+++|++|+..+|+++.++|||||++++.++..... +.....+.. ..+.+..+++.+++.++|+++||+++
T Consensus 108 ~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 185 (260)
T 1vl5_A 108 TCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN--DAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELE 185 (260)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS--HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEE
T ss_pred EEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC--HHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEE
Confidence 999999999999999999999999999999988765322 221111111 22356788999999999999999987
Q ss_pred EEEE
Q 020307 313 TSKV 316 (328)
Q Consensus 313 ~~~~ 316 (328)
....
T Consensus 186 ~~~~ 189 (260)
T 1vl5_A 186 ELHC 189 (260)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7443
No 6
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.90 E-value=2e-22 Score=175.65 Aligned_cols=153 Identities=16% Similarity=0.245 Sum_probs=129.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++...+ ..++.++.+|++.+|+++++||+|
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKG---VENVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHT---CCSEEEEECBTTBCCSCTTCEEEE
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcC---CCCeEEEecccccCCCCCCcEEEE
Confidence 5567889999999999999999999876 99999999999999999987765 468999999999999988999999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH----hhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE----RILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
++..+++|++++..+++++.++|||||++++.++..... +.....+.. ..+.|...++.+++.++++++||+++
T Consensus 92 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~ 169 (239)
T 1xxl_A 92 TCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED--PVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQ 169 (239)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS--HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEE
T ss_pred EECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC--hhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEE
Confidence 999999999999999999999999999999988765422 221211111 23466788999999999999999987
Q ss_pred EEEE
Q 020307 313 TSKV 316 (328)
Q Consensus 313 ~~~~ 316 (328)
+...
T Consensus 170 ~~~~ 173 (239)
T 1xxl_A 170 DIQK 173 (239)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7543
No 7
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.89 E-value=1.6e-22 Score=173.56 Aligned_cols=162 Identities=16% Similarity=0.220 Sum_probs=128.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++. .++.++.+|+.+++++ ++||+|
T Consensus 41 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~~fD~v 110 (220)
T 3hnr_A 41 VVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-TSIDTI 110 (220)
T ss_dssp HHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-SCCSEE
T ss_pred hhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-CCeEEE
Confidence 3445788999999999999999999865 99999999999999998742 3788999999999887 899999
Q ss_pred EeccccccCCChHH--HHHHHHhcccCCcEEEEEEeccCCCCcc-hhhHHHHH-------hhhccCCCCCHHHHHHHHHH
Q 020307 237 HAGAALHCWPSPSN--AVAEISRILRSGGVFVGTTFLRYTSSTS-LTGRVLRE-------RILQNYNYLTEEEIEDLCTS 306 (328)
Q Consensus 237 ~~~~vl~h~~d~~~--~l~~~~r~LkpgG~l~i~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~l~~ll~~ 306 (328)
++..+++|++++.. +|+++.++|||||++++.++........ .....+.. .......+++.+++.+++++
T Consensus 111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 190 (220)
T 3hnr_A 111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFEN 190 (220)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHH
T ss_pred EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHH
Confidence 99999999999977 9999999999999999998765421111 00111111 11133456799999999999
Q ss_pred CCCeEEEEEEeCcEEEEEEeCC
Q 020307 307 CGLTNYTSKVQQSFIMFAAQKP 328 (328)
Q Consensus 307 ~Gf~~v~~~~~~~~~~~~a~k~ 328 (328)
+||+++......-..++.++|+
T Consensus 191 aGf~v~~~~~~~~~w~~~~~~~ 212 (220)
T 3hnr_A 191 NGFHVTFTRLNHFVWVMEATKQ 212 (220)
T ss_dssp TTEEEEEEECSSSEEEEEEEEC
T ss_pred CCCEEEEeeccceEEEEeehhh
Confidence 9999888666666677777664
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.89 E-value=5.9e-22 Score=175.75 Aligned_cols=157 Identities=21% Similarity=0.260 Sum_probs=130.2
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++...++ ..++.++.+|+.++|+++++||+|
T Consensus 57 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v 133 (273)
T 3bus_A 57 LDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL--ANRVTFSYADAMDLPFEDASFDAV 133 (273)
T ss_dssp SCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCCSCTTCEEEE
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECccccCCCCCCCccEE
Confidence 445678899999999999999999874 45999999999999999999887664 457999999999999988999999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
++..+++|++++..+|+++.++|||||++++.++.............+.. ....+..+++.+++.++++++||++++.
T Consensus 134 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 213 (273)
T 3bus_A 134 WALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTST 213 (273)
T ss_dssp EEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred EEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEE
Confidence 99999999999999999999999999999999987653332221111111 1224667899999999999999998875
Q ss_pred EE
Q 020307 315 KV 316 (328)
Q Consensus 315 ~~ 316 (328)
..
T Consensus 214 ~~ 215 (273)
T 3bus_A 214 VD 215 (273)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.89 E-value=4.1e-22 Score=179.10 Aligned_cols=155 Identities=15% Similarity=0.170 Sum_probs=128.2
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
...++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.++++....++ ..++.++.+|+..+|+++++||+|+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~ 155 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGL--ADNITVKYGSFLEIPCEDNSYDFIW 155 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTC--TTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEEcCcccCCCCCCCEeEEE
Confidence 45678899999999999999999873 23999999999999999999877664 4689999999999999899999999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 238 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 238 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
+..+++|++++..+|+++.++|||||++++.++.............+.... ....+.+.+++.++++++||++++...
T Consensus 156 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 156 SQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRI-KLHDMGSLGLYRSLAKECGLVTLRTFS 233 (297)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHH-TCSSCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHh-cCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 999999999999999999999999999999998765433222222222221 233567999999999999999887543
No 10
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.89 E-value=5.8e-22 Score=171.84 Aligned_cols=164 Identities=15% Similarity=0.243 Sum_probs=131.7
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.+++++.. ..++.++++|+.+++++ ++||+|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~~~-~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG-----NLKVKYIEADYSKYDFE-EKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS-----CTTEEEEESCTTTCCCC-SCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc-----CCCEEEEeCchhccCCC-CCceEEEE
Confidence 3467899999999999999999997777999999999999999998765 34899999999998876 89999999
Q ss_pred ccccccCCChH--HHHHHHHhcccCCcEEEEEEeccCCCCc--chhhHHHHH----------------hhhccCCCCCHH
Q 020307 239 GAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSST--SLTGRVLRE----------------RILQNYNYLTEE 298 (328)
Q Consensus 239 ~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~----------------~~~~~~~~~~~~ 298 (328)
..+++|++++. .+++++.++|||||++++.++....... ......+.. ....+...++.+
T Consensus 116 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (234)
T 3dtn_A 116 ALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMN 195 (234)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHH
T ss_pred eCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHH
Confidence 99999998876 5999999999999999999977642211 010111111 011456778999
Q ss_pred HHHHHHHHCCCeEEEE-EEeCcEEEEEEeCC
Q 020307 299 EIEDLCTSCGLTNYTS-KVQQSFIMFAAQKP 328 (328)
Q Consensus 299 ~l~~ll~~~Gf~~v~~-~~~~~~~~~~a~k~ 328 (328)
++.++|+++||+.++. .....|.++.+.|+
T Consensus 196 ~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~ 226 (234)
T 3dtn_A 196 QQLNWLKEAGFRDVSCIYKYYQFAVMFGRKT 226 (234)
T ss_dssp HHHHHHHHTTCEEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHHHcCCCceeeeeeecceeEEEEEec
Confidence 9999999999999886 44577888888774
No 11
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.88 E-value=2.3e-22 Score=178.12 Aligned_cols=175 Identities=22% Similarity=0.384 Sum_probs=124.4
Q ss_pred ccccCCCchhhccCCCCccccccccCceeeCCCCccccCccceeeeecccCCCC-----ccCCcchhhhccCCchHHHHH
Q 020307 61 FSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISGLKD-----YTEVKPASTELFRSPFVSFLY 135 (328)
Q Consensus 61 l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~~~~~-----y~~~~~~~~~~~~~~~~~~~~ 135 (328)
+.||.|++.+.... ..+.|.+|+..+..++||++++....... ..++......++....+....
T Consensus 3 ~~Cp~C~~~~~~~~-----------~~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (269)
T 1p91_A 3 FSCPLCHQPLSREK-----------NSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLR 71 (269)
T ss_dssp BBCTTTCCBCEEET-----------TEEECTTCCEEEBCTTSCEECSCSSSSCSCCCSSSHHHHHHHHHHHTTTTTHHHH
T ss_pred ccCCCCCccceeCC-----------CEEECCCCCcCCcCCCEEEEeecccccCCCCCCCCHHHHHHHHHHHhCCCcHHHH
Confidence 78999998775532 47999999998899999999876533111 111111111122221111111
Q ss_pred HhhHHhhhhcCCCCCcchhhhccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCC
Q 020307 136 ERGWRQNFNRSGFPGPDEEEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSN 215 (328)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~ 215 (328)
+.. ...+. ..+ ..++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|+++ ..+
T Consensus 72 ~~~-~~~~~----------~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~--------~~~ 131 (269)
T 1p91_A 72 DAI-VAQLR----------ERL-DDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR--------YPQ 131 (269)
T ss_dssp HHH-HHHHH----------HHS-CTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHH--------CTT
T ss_pred HHH-HHHHH----------Hhc-CCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHh--------CCC
Confidence 100 00000 001 1467899999999999999999985556999999999999999886 457
Q ss_pred eEEEEecCCCCCCCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccC
Q 020307 216 LALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 216 i~~~~~d~~~lp~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 273 (328)
+.+..+|+..+|+++++||+|++..+.. .++++.++|||||++++.++...
T Consensus 132 ~~~~~~d~~~~~~~~~~fD~v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 132 VTFCVASSHRLPFSDTSMDAIIRIYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp SEEEECCTTSCSBCTTCEEEEEEESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred cEEEEcchhhCCCCCCceeEEEEeCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 8999999999998889999999876632 48999999999999999998754
No 12
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.88 E-value=4.8e-22 Score=173.37 Aligned_cols=146 Identities=13% Similarity=0.117 Sum_probs=119.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.+++.|+++.. .++.++++|+.++ +++++||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK-------DGITYIHSRFEDA-QLPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcCCcccEEEEh
Confidence 4677999999999999999999887 99999999999999998742 2799999999887 467899999999
Q ss_pred cccccCCChHHHHHHHH-hcccCCcEEEEEEeccCCCCcchh--hHH--------HHHhhhccCCCCCHHHHHHHHHHCC
Q 020307 240 AALHCWPSPSNAVAEIS-RILRSGGVFVGTTFLRYTSSTSLT--GRV--------LRERILQNYNYLTEEEIEDLCTSCG 308 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~-r~LkpgG~l~i~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~l~~ll~~~G 308 (328)
++++|++++..+|+++. ++|||||++++.+++......... ... -......|..+++.+++.++++++|
T Consensus 111 ~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 190 (250)
T 2p7i_A 111 HVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG 190 (250)
T ss_dssp SCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT
T ss_pred hHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCC
Confidence 99999999999999999 999999999999987642110000 000 0011336778899999999999999
Q ss_pred CeEEEEE
Q 020307 309 LTNYTSK 315 (328)
Q Consensus 309 f~~v~~~ 315 (328)
|++++..
T Consensus 191 f~~~~~~ 197 (250)
T 2p7i_A 191 LQVTYRS 197 (250)
T ss_dssp CEEEEEE
T ss_pred CeEEEEe
Confidence 9988853
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.88 E-value=5.6e-22 Score=174.88 Aligned_cols=152 Identities=15% Similarity=0.227 Sum_probs=126.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++... ..++.++.+|+.++|+++++||+|
T Consensus 51 ~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 124 (266)
T 3ujc_A 51 IELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG-----NNKIIFEANDILTKEFPENNFDLI 124 (266)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS-----CTTEEEEECCTTTCCCCTTCEEEE
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc-----CCCeEEEECccccCCCCCCcEEEE
Confidence 455678899999999999999999974 34999999999999999987543 268999999999999889999999
Q ss_pred EeccccccC--CChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH-hhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 237 HAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE-RILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 237 ~~~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
++..+++|+ +++..+++++.++|||||++++.++.... ...+ ...+.. ....+..+++.+++.++++++||++++
T Consensus 125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 202 (266)
T 3ujc_A 125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE-KENW-DDEFKEYVKQRKYTLITVEEYADILTACNFKNVV 202 (266)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC-GGGC-CHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC-cccc-hHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 999999999 78899999999999999999999987653 1122 112211 223567789999999999999999887
Q ss_pred EEE
Q 020307 314 SKV 316 (328)
Q Consensus 314 ~~~ 316 (328)
...
T Consensus 203 ~~~ 205 (266)
T 3ujc_A 203 SKD 205 (266)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 14
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.88 E-value=4.3e-21 Score=169.82 Aligned_cols=151 Identities=15% Similarity=0.192 Sum_probs=126.5
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.+++++...++ ..++.++.+|+.++|+++++||+|++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~fD~i~~ 120 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL--QNRVTGIVGSMDDLPFRNEELDLIWS 120 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC--CcCcEEEEcChhhCCCCCCCEEEEEE
Confidence 457889999999999999999998 466999999999999999999888764 46799999999999988899999999
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCc-chhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSST-SLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
..+++|+ ++..+++++.++|||||++++.++....... ......+.. ....+.+.+++.++++++||++++...
T Consensus 121 ~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 121 EGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMD---AYPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp SSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHH---HCTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHH---hCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 9999999 8999999999999999999999976432221 112222222 234678999999999999999988544
No 15
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.88 E-value=9.8e-22 Score=172.62 Aligned_cols=152 Identities=13% Similarity=0.121 Sum_probs=125.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++...++ ..++.++.+|+.++++ +++||+|
T Consensus 32 ~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 32 LRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV--SERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp TCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCCTTCCC-SSCEEEE
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECChHhCCc-CCCCCEE
Confidence 445678899999999999999999875 44999999999999999999887654 4589999999999887 7899999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHh--hhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER--ILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
++..+++|++++..+|+++.++|||||++++.++........ ..+... ...+..+++.+++.++++++||++++.
T Consensus 108 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 108 ACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPAT---EEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp EEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSS---HHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred EECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCCh---HHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 999999999999999999999999999999998764322111 111111 124457889999999999999998774
Q ss_pred E
Q 020307 315 K 315 (328)
Q Consensus 315 ~ 315 (328)
.
T Consensus 185 ~ 185 (256)
T 1nkv_A 185 V 185 (256)
T ss_dssp E
T ss_pred E
Confidence 3
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.88 E-value=3.4e-21 Score=169.25 Aligned_cols=151 Identities=15% Similarity=0.176 Sum_probs=125.7
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
...++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.+++++...++ ..++.++++|+..+|+++++||+|+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~ 119 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANC--ADRVKGITGSMDNLPFQNEELDLIW 119 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhCCCCCCCEEEEE
Confidence 345678999999999999999999975 3999999999999999999988764 4569999999999998889999999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCc-chhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 238 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSST-SLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 238 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
+..+++|+ ++..+++++.++|||||++++.++....... ......+.. .....++.+++.++++++||+++...
T Consensus 120 ~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 120 SEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMD---AYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp EESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHH---HCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred ecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHH---hCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 99999999 8999999999999999999999976432221 112222322 23447799999999999999998854
No 17
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.88 E-value=1.8e-21 Score=167.06 Aligned_cols=157 Identities=16% Similarity=0.128 Sum_probs=120.6
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC--CCCCeEEEEecCCCCCCCCCccc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRLPFASGFVD 234 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~lp~~~~~fD 234 (328)
+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++...++. ...++.++.+|+..+++.+++||
T Consensus 25 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (219)
T 3jwg_A 25 LKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYD 104 (219)
T ss_dssp HHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCS
T ss_pred HhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCC
Confidence 4445678999999999999999999887679999999999999999988664420 01289999999988887788999
Q ss_pred eEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHH----HHHHHCC
Q 020307 235 AVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE----DLCTSCG 308 (328)
Q Consensus 235 ~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~ll~~~G 308 (328)
+|++..+++|++++ ..+++++.++|||||+++...........+. ..........|...++.+++. ++++++|
T Consensus 105 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~G 183 (219)
T 3jwg_A 105 AATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGN-LFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYG 183 (219)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCC-T-----GGGCCTTSBCHHHHHHHHHHHHHHHT
T ss_pred EEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcc-cCcccccccCceeeecHHHHHHHHHHHHHHCC
Confidence 99999999999977 6899999999999995554443222111111 111122344777789999999 8899999
Q ss_pred CeEEEE
Q 020307 309 LTNYTS 314 (328)
Q Consensus 309 f~~v~~ 314 (328)
|++...
T Consensus 184 f~v~~~ 189 (219)
T 3jwg_A 184 YSVRFL 189 (219)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 987654
No 18
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.87 E-value=2.8e-21 Score=175.05 Aligned_cols=152 Identities=17% Similarity=0.086 Sum_probs=126.4
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...++ ..++.++.+|+.++|+++++||+|++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~fD~V~~ 191 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI--DDHVRSRVCNMLDTPFDKGAVTASWN 191 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhcCCCCCCCEeEEEE
Confidence 5678899999999999999999983 34999999999999999999988764 45899999999999988899999999
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcch--hhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL--TGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
..+++|+ ++..+|+++.++|||||++++.++......... ....+... ....+++.+++.++++++||++++...
T Consensus 192 ~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 192 NESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAH--FECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp ESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHH--HTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred CCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhh--hcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 9999999 699999999999999999999998765432111 12222222 234588999999999999999888544
No 19
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.87 E-value=1.2e-21 Score=170.59 Aligned_cols=147 Identities=23% Similarity=0.292 Sum_probs=122.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.. ..++.++.+|+..+++++++||+|++.
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~~ 123 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERGE------GPDLSFIKGDLSSLPFENEQFEAIMAI 123 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTTC------BTTEEEEECBTTBCSSCTTCEEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhcc------cCCceEEEcchhcCCCCCCCccEEEEc
Confidence 4678999999999999999999865 99999999999999987642 468999999999999889999999999
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
.+++|++++..+++++.++|||||++++.++.............. .....+...++.+++.++++++||++++..
T Consensus 124 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 124 NSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRL-YGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp SCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGG-GTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhh-ccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 999999999999999999999999999999765422111101100 012246678999999999999999998854
No 20
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.87 E-value=9.2e-22 Score=175.81 Aligned_cols=152 Identities=16% Similarity=0.157 Sum_probs=123.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-CCCCccceEEec
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAG 239 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~i~~~ 239 (328)
++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++...++ ..++.++.+|+.+++ +.+++||+|++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKGV--SDNMQFIHCAAQDVASHLETPVDLILFH 143 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-CC--GGGEEEEESCGGGTGGGCSSCEEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--CcceEEEEcCHHHhhhhcCCCceEEEEC
Confidence 367999999999999999999865 999999999999999999887653 368999999999887 778999999999
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcch-h---hHHHHH-------hhhccCCCCCHHHHHHHHHHCC
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL-T---GRVLRE-------RILQNYNYLTEEEIEDLCTSCG 308 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~---~~~~~~-------~~~~~~~~~~~~~l~~ll~~~G 308 (328)
.+++|++++..+++++.++|||||++++.+++........ . ...+.. ....+..+++.+++.++++++|
T Consensus 144 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 223 (285)
T 4htf_A 144 AVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAG 223 (285)
T ss_dssp SCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTT
T ss_pred chhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCC
Confidence 9999999999999999999999999999998754211000 0 001111 1124457899999999999999
Q ss_pred CeEEEEEE
Q 020307 309 LTNYTSKV 316 (328)
Q Consensus 309 f~~v~~~~ 316 (328)
|++++...
T Consensus 224 f~v~~~~~ 231 (285)
T 4htf_A 224 WQIMGKTG 231 (285)
T ss_dssp CEEEEEEE
T ss_pred Cceeeeee
Confidence 99988654
No 21
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.87 E-value=1.5e-21 Score=173.50 Aligned_cols=155 Identities=17% Similarity=0.278 Sum_probs=128.6
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++...+ ..++.++.+|+..+++++++||+|++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG---IKNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEcccccCCCCCCCeeEEEE
Confidence 457889999999999999999999877899999999999999999988765 45899999999999988999999999
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCC----CcchhhHHHHH----hhhccCCCCCHHHHHHHHHHCCCe
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTS----STSLTGRVLRE----RILQNYNYLTEEEIEDLCTSCGLT 310 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~l~~ll~~~Gf~ 310 (328)
..+++|++++..+++++.++|||||++++.++..... ..+.....+.. ....+...++..++..+|+++||+
T Consensus 112 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 191 (276)
T 3mgg_A 112 CFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFE 191 (276)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCE
T ss_pred echhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999998764321 11111222111 222445667889999999999999
Q ss_pred EEEEEE
Q 020307 311 NYTSKV 316 (328)
Q Consensus 311 ~v~~~~ 316 (328)
+++...
T Consensus 192 ~v~~~~ 197 (276)
T 3mgg_A 192 KIRVEP 197 (276)
T ss_dssp EEEEEE
T ss_pred eEEEee
Confidence 888543
No 22
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.87 E-value=1e-21 Score=177.35 Aligned_cols=167 Identities=15% Similarity=0.163 Sum_probs=131.7
Q ss_pred ccCCCeEEEEcCCcCHHHHHHH-HhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFA-KSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
..++.+|||||||+|.++..++ ...+..+|+|+|+|+.+++.|++++...+. ..++.++++|+.+++++ ++||+|+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~-~~fD~v~ 192 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL--AGQITLHRQDAWKLDTR-EGYDLLT 192 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT--GGGEEEEECCGGGCCCC-SCEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECchhcCCcc-CCeEEEE
Confidence 4568899999999999999986 445677999999999999999999887653 34599999999999887 8999999
Q ss_pred eccccccCCChHH---HHHHHHhcccCCcEEEEEEeccCCC---Ccchhh-----------HH-HHHhhhc-cCCCCCHH
Q 020307 238 AGAALHCWPSPSN---AVAEISRILRSGGVFVGTTFLRYTS---STSLTG-----------RV-LRERILQ-NYNYLTEE 298 (328)
Q Consensus 238 ~~~vl~h~~d~~~---~l~~~~r~LkpgG~l~i~~~~~~~~---~~~~~~-----------~~-~~~~~~~-~~~~~~~~ 298 (328)
+..+++|++++.. +++++.++|||||++++.++..... ...|.. .. +...... ...+++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 9999999999976 7999999999999999988665321 111110 00 1111112 23568999
Q ss_pred HHHHHHHHCCCeEEEEEE--eCcEEEEEEeCC
Q 020307 299 EIEDLCTSCGLTNYTSKV--QQSFIMFAAQKP 328 (328)
Q Consensus 299 ~l~~ll~~~Gf~~v~~~~--~~~~~~~~a~k~ 328 (328)
++.++++++||++++... ...+..++++||
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 999999999999988653 344577888887
No 23
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.87 E-value=1.5e-21 Score=160.89 Aligned_cols=146 Identities=12% Similarity=0.203 Sum_probs=121.8
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ .+++.+..+| +++++++||+|
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d---~~~~~~~~D~v 79 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK--------FDSVITLSDP---KEIPDNSVDFI 79 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH--------CTTSEEESSG---GGSCTTCEEEE
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---CCCCCCceEEE
Confidence 4456778999999999999999999874 999999999999999987 4578999999 66778899999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
++..+++|++++..+++++.++|||||++++.++....... .+.+...++.++++++++ ||++++...
T Consensus 80 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 80 LFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGI----------GPPLSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp EEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSS----------SSCGGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred EEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcccccc----------CchHhhhcCHHHHHHHHh--CcEEEEccC
Confidence 99999999999999999999999999999999987653211 113456689999999999 999998766
Q ss_pred eCc-EEEEEEeC
Q 020307 317 QQS-FIMFAAQK 327 (328)
Q Consensus 317 ~~~-~~~~~a~k 327 (328)
... .+.++++|
T Consensus 148 ~~~~~~~l~~~~ 159 (170)
T 3i9f_A 148 PTPYHFGLVLKR 159 (170)
T ss_dssp SSTTEEEEEEEE
T ss_pred CCCceEEEEEec
Confidence 543 45555543
No 24
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.87 E-value=2.9e-21 Score=179.83 Aligned_cols=158 Identities=18% Similarity=0.172 Sum_probs=126.8
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhc-----CcCCCCCeEEEEecCCCC------
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQD-----NTILTSNLALVRADVCRL------ 226 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~-----~~~~~~~i~~~~~d~~~l------ 226 (328)
..++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++... +.....++.++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4578899999999999999998873 6679999999999999999887543 100136899999999887
Q ss_pred CCCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHH
Q 020307 227 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTS 306 (328)
Q Consensus 227 p~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ 306 (328)
++++++||+|++..+++|++++..+|+++.++|||||++++.++........................++.+++.++|++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999987765433322111111122244567889999999999
Q ss_pred CCCeEEEEEE
Q 020307 307 CGLTNYTSKV 316 (328)
Q Consensus 307 ~Gf~~v~~~~ 316 (328)
+||++++...
T Consensus 241 aGF~~v~~~~ 250 (383)
T 4fsd_A 241 AGFRDVRLVS 250 (383)
T ss_dssp TTCCCEEEEE
T ss_pred CCCceEEEEe
Confidence 9998776544
No 25
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.87 E-value=1.5e-21 Score=167.40 Aligned_cols=156 Identities=12% Similarity=0.079 Sum_probs=118.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC--CCCCeEEEEecCCCCCCCCCccc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRLPFASGFVD 234 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~lp~~~~~fD 234 (328)
+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++...++. ...++.++.+|+...+...++||
T Consensus 25 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (217)
T 3jwh_A 25 LKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYD 104 (217)
T ss_dssp HHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCS
T ss_pred HHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcC
Confidence 4445678999999999999999999887679999999999999999998765420 01279999999988877778999
Q ss_pred eEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHH----HHHHHCC
Q 020307 235 AVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE----DLCTSCG 308 (328)
Q Consensus 235 ~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~ll~~~G 308 (328)
+|++..+++|++++ ..+++++.++|||||+++++.........+. ..........|...++.+++. ++++++|
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G 183 (217)
T 3jwh_A 105 AATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFAN-LPAGKLRHKDHRFEWTRSQFQNWANKITERFA 183 (217)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC------------CCSCBCHHHHHHHHHHHHHHSS
T ss_pred EEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcc-cccccccccccccccCHHHHHHHHHHHHHHcC
Confidence 99999999999977 7999999999999996666553211000000 000111234677789999999 9999999
Q ss_pred CeEEE
Q 020307 309 LTNYT 313 (328)
Q Consensus 309 f~~v~ 313 (328)
|++..
T Consensus 184 f~v~~ 188 (217)
T 3jwh_A 184 YNVQF 188 (217)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 98765
No 26
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=1.9e-21 Score=164.91 Aligned_cols=139 Identities=13% Similarity=0.172 Sum_probs=119.6
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEeccc
Q 020307 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 241 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~v 241 (328)
+.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ .+++.++.+|+.++++++++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehhh
Confidence 78999999999999999999865 999999999999999986 55899999999999988899999999999
Q ss_pred cccCC--ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEe
Q 020307 242 LHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ 317 (328)
Q Consensus 242 l~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 317 (328)
++|++ ++..+|+++.++|||||++++.++.... ...+ . ....+..+++.+++.++++++||++++....
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-~~~~-~-----~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPS-LEPM-Y-----HPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSS-CEEE-C-----CSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCc-hhhh-h-----chhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 99997 8899999999999999999999987653 1111 0 0113456789999999999999999986553
No 27
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.86 E-value=6e-21 Score=167.43 Aligned_cols=152 Identities=16% Similarity=0.151 Sum_probs=119.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.++++.. ..++.++.+|+..+++++++||+|
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCCTTCEEEE
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCCCCCeEEE
Confidence 4445788999999999999999999864 389999999999999998754 358999999999999888999999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCc---chh------------hHHHHH------h--hhccCC
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSST---SLT------------GRVLRE------R--ILQNYN 293 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~---~~~------------~~~~~~------~--~~~~~~ 293 (328)
++..+++|++++..+|+++.++|||||++++.++....... .|. ...+.. . ......
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (253)
T 3g5l_A 113 LSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKY 192 (253)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEE
T ss_pred EEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccE
Confidence 99999999999999999999999999999998765320000 000 000000 0 001122
Q ss_pred CCCHHHHHHHHHHCCCeEEEEE
Q 020307 294 YLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 294 ~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
.++.+++.++|+++||++++..
T Consensus 193 ~~t~~~~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 193 HRTVTTYIQTLLKNGFQINSVI 214 (253)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEE
T ss_pred ecCHHHHHHHHHHcCCeeeeee
Confidence 3499999999999999998865
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.86 E-value=1.3e-21 Score=171.57 Aligned_cols=150 Identities=9% Similarity=0.032 Sum_probs=121.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.+++++.. ..++.++.+|+..+++++++||+|
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 162 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG-----MPVGKFILASMETATLPPNTYDLI 162 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT-----SSEEEEEESCGGGCCCCSSCEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc-----CCceEEEEccHHHCCCCCCCeEEE
Confidence 344567899999999999999999886 44799999999999999998654 357999999999988888999999
Q ss_pred EeccccccCC--ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 237 HAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 237 ~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
++.++++|++ ++..+|+++.++|||||++++.++...... +.. ....+..+++.+++.++++++||++++.
T Consensus 163 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 163 VIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDR--FLV-----DKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CC--EEE-----ETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccc--cee-----cccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 9999999995 478999999999999999999987433111 100 0113344679999999999999999987
Q ss_pred EEeCc
Q 020307 315 KVQQS 319 (328)
Q Consensus 315 ~~~~~ 319 (328)
.....
T Consensus 236 ~~~~~ 240 (254)
T 1xtp_A 236 AFQEE 240 (254)
T ss_dssp EECTT
T ss_pred eecCC
Confidence 65443
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.86 E-value=9.3e-21 Score=163.82 Aligned_cols=154 Identities=19% Similarity=0.245 Sum_probs=124.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC--CCCCeEEEEecCCCCCCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+.. ...++.++.+|+..+++++++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 4678999999999999999999865 9999999999999999987764421 01268999999999998899999999
Q ss_pred eccccccCCChH---HHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhh-------------------hccCCCC
Q 020307 238 AGAALHCWPSPS---NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI-------------------LQNYNYL 295 (328)
Q Consensus 238 ~~~vl~h~~d~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 295 (328)
+..+++|++++. .+++++.++|||||++++.++........+ ...+.... ..+..++
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLY-RKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHH-HHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHH-HHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 999999999998 899999999999999999998764322211 22211111 1234689
Q ss_pred CHHHHHHHHHHCCCeEEEEEE
Q 020307 296 TEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 296 ~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
+.+++.++++++||++++...
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEe
Confidence 999999999999999888543
No 30
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.86 E-value=2.8e-21 Score=164.88 Aligned_cols=137 Identities=22% Similarity=0.292 Sum_probs=116.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++. ++.+..+|+..++ .+++||+|++.
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-~~~~fD~v~~~ 109 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD-AIDAYDAVWAH 109 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC-CCSCEEEEEEC
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC-CCCcEEEEEec
Confidence 4678999999999999999999865 9999999999999999864 4567889998888 78899999999
Q ss_pred cccccCC--ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCC-CeEEEEEE
Q 020307 240 AALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCG-LTNYTSKV 316 (328)
Q Consensus 240 ~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~G-f~~v~~~~ 316 (328)
.+++|++ ++..+|+++.++|||||++++..+........ ....+..+++.+++.++++++| |++++...
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 110 ACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRD--------KLARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC--------TTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred CchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccc--------ccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 9999998 77899999999999999999998765432211 1124567899999999999999 99888643
No 31
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.86 E-value=1.2e-20 Score=161.32 Aligned_cols=158 Identities=16% Similarity=0.174 Sum_probs=122.0
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++ .+ ..++.++.+|+.++ +++++||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~----~~---~~~~~~~~~d~~~~-~~~~~~D~v~~ 113 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGR----HG---LDNVEFRQQDLFDW-TPDRQWDAVFF 113 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGG----GC---CTTEEEEECCTTSC-CCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHh----cC---CCCeEEEecccccC-CCCCceeEEEE
Confidence 45677999999999999999999865 99999999999999987 21 46899999999887 67889999999
Q ss_pred ccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcch-hhHHHHHh----h--h----ccCCCCCHHHHHHHHH
Q 020307 239 GAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSL-TGRVLRER----I--L----QNYNYLTEEEIEDLCT 305 (328)
Q Consensus 239 ~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~~~~~~~----~--~----~~~~~~~~~~l~~ll~ 305 (328)
..+++|++++ ..+|+++.++|||||++++.+++........ ........ . . ....+++.+++.++++
T Consensus 114 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 193 (218)
T 3ou2_A 114 AHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLT 193 (218)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHH
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHH
Confidence 9999999997 7899999999999999999998764221111 00000000 0 0 1244789999999999
Q ss_pred HCCCeEEEEEEeCcEEEEEEe
Q 020307 306 SCGLTNYTSKVQQSFIMFAAQ 326 (328)
Q Consensus 306 ~~Gf~~v~~~~~~~~~~~~a~ 326 (328)
++||++.........+..+++
T Consensus 194 ~aGf~v~~~~~~~~~~~~~~~ 214 (218)
T 3ou2_A 194 ALGWSCSVDEVHPGFLYATCR 214 (218)
T ss_dssp HTTEEEEEEEEETTEEEEEEE
T ss_pred HCCCEEEeeeccccceEeecC
Confidence 999997766665555554444
No 32
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.86 E-value=2.8e-20 Score=171.26 Aligned_cols=166 Identities=11% Similarity=0.155 Sum_probs=134.7
Q ss_pred cccC-CCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-CCCCccce
Q 020307 158 KSAQ-GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDA 235 (328)
Q Consensus 158 ~~~~-~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~ 235 (328)
...+ +.+|||||||+|.++..+++.+|..+++++|+ +.+++.+++++...++ ..++.++.+|+.+.+ +..+.||+
T Consensus 175 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~D~ 251 (352)
T 3mcz_A 175 GVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL--GGRVEFFEKNLLDARNFEGGAADV 251 (352)
T ss_dssp GGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--GGGEEEEECCTTCGGGGTTCCEEE
T ss_pred CCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC--CCceEEEeCCcccCcccCCCCccE
Confidence 3344 78999999999999999999988889999999 8899999998877653 457999999998765 13456999
Q ss_pred EEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCC-cchhhHHHHH----hhhccCCCCCHHHHHHHHHHCC
Q 020307 236 VHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSS-TSLTGRVLRE----RILQNYNYLTEEEIEDLCTSCG 308 (328)
Q Consensus 236 i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~l~~ll~~~G 308 (328)
|++.+++||++++ ..+|+++.++|||||++++.++..+... .+.. ..+.. ....+...++.++|+++++++|
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 330 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPAL-SADFSLHMMVNTNHGELHPTPWIAGVVRDAG 330 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHH-HHHHHHHHHHHSTTCCCCCHHHHHHHHHHTT
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCch-HHHhhHHHHhhCCCCCcCCHHHHHHHHHHCC
Confidence 9999999999877 7899999999999999999997665432 2221 11111 1123456789999999999999
Q ss_pred CeEEEEEEeCcEEEEEEeCC
Q 020307 309 LTNYTSKVQQSFIMFAAQKP 328 (328)
Q Consensus 309 f~~v~~~~~~~~~~~~a~k~ 328 (328)
|++++ ...+.+.+++++||
T Consensus 331 f~~~~-~~~g~~~l~~a~kp 349 (352)
T 3mcz_A 331 LAVGE-RSIGRYTLLIGQRS 349 (352)
T ss_dssp CEEEE-EEETTEEEEEEECC
T ss_pred Cceee-eccCceEEEEEecC
Confidence 99998 56788999999997
No 33
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.86 E-value=1.1e-20 Score=168.22 Aligned_cols=147 Identities=23% Similarity=0.317 Sum_probs=120.0
Q ss_pred hccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 156 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 156 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
.+...++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.++++ .+++.++.+|+..+|+ +++||+
T Consensus 52 ~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~~fD~ 120 (279)
T 3ccf_A 52 LLNPQPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQN--------YPHLHFDVADARNFRV-DKPLDA 120 (279)
T ss_dssp HHCCCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHH--------CTTSCEEECCTTTCCC-SSCEEE
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHhh--------CCCCEEEECChhhCCc-CCCcCE
Confidence 345567889999999999999999984 45999999999999999886 4578899999999887 579999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHH----Hh------hhccCCCCCHHHHHHHHH
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLR----ER------ILQNYNYLTEEEIEDLCT 305 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~l~~ll~ 305 (328)
|++..+++|++|+..+++++.++|||||++++.++.... ...+ ...+. .. ...+..+++.+++.++++
T Consensus 121 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 198 (279)
T 3ccf_A 121 VFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGN-IKYI-LEALYNALETLGIHNPQALNPWYFPSIGEYVNILE 198 (279)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTT-THHH-HHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHH
T ss_pred EEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcc-hHHH-HHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHH
Confidence 999999999999999999999999999999999876532 1111 11111 11 123456789999999999
Q ss_pred HCCCeEEEEE
Q 020307 306 SCGLTNYTSK 315 (328)
Q Consensus 306 ~~Gf~~v~~~ 315 (328)
++||++++..
T Consensus 199 ~aGf~~~~~~ 208 (279)
T 3ccf_A 199 KQGFDVTYAA 208 (279)
T ss_dssp HHTEEEEEEE
T ss_pred HcCCEEEEEE
Confidence 9999988743
No 34
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.86 E-value=2.1e-21 Score=171.34 Aligned_cols=147 Identities=20% Similarity=0.162 Sum_probs=120.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.+++ ..++.++.+|+.++|+++++||+|
T Consensus 30 ~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~---------~~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 30 LNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVV---------HPQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCC---------CTTEEEECCCTTSCCSCTTCBSEE
T ss_pred hCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHh---------ccCCEEEECchhhCCCCCCCEeEE
Confidence 445678899999999999999999854 499999999999988765 448999999999999989999999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH-hhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE-RILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
++.++++|++++..+++++.++|| ||++++.++........+....+.. ....+..+++.+++. +++++||++++..
T Consensus 99 ~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~ 176 (261)
T 3ege_A 99 ISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAI 176 (261)
T ss_dssp EEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEE
T ss_pred EEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEE
Confidence 999999999999999999999999 9999999887654333332222221 122456778889999 9999999888754
Q ss_pred E
Q 020307 316 V 316 (328)
Q Consensus 316 ~ 316 (328)
.
T Consensus 177 ~ 177 (261)
T 3ege_A 177 P 177 (261)
T ss_dssp E
T ss_pred E
Confidence 3
No 35
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.86 E-value=1.1e-20 Score=168.93 Aligned_cols=155 Identities=14% Similarity=0.161 Sum_probs=124.1
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
...++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+++.+++++... ..++.++++|+.++++ +++||+|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~~-~~~fD~v 93 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----PYDSEFLEGDATEIEL-NDKYDIA 93 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS----SSEEEEEESCTTTCCC-SSCEEEE
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEEcchhhcCc-CCCeeEE
Confidence 445778999999999999999999866 369999999999999999988764 3389999999999887 4699999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEecc-----C----CCC------cchhhHHHHH-hhhccCCCCCHHHH
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR-----Y----TSS------TSLTGRVLRE-RILQNYNYLTEEEI 300 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~-----~----~~~------~~~~~~~~~~-~~~~~~~~~~~~~l 300 (328)
++..+++|++++..+++++.++|||||++++.+++. . ... ...+.+.+.. .......+.+.+++
T Consensus 94 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (284)
T 3gu3_A 94 ICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKI 173 (284)
T ss_dssp EEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTH
T ss_pred EECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHH
Confidence 999999999999999999999999999999999871 1 000 1111222222 11244566778899
Q ss_pred HHHHHHCCCeEEEEEEe
Q 020307 301 EDLCTSCGLTNYTSKVQ 317 (328)
Q Consensus 301 ~~ll~~~Gf~~v~~~~~ 317 (328)
.++++++||+.++....
T Consensus 174 ~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 174 PIYLSELGVKNIECRVS 190 (284)
T ss_dssp HHHHHHTTCEEEEEEEC
T ss_pred HHHHHHcCCCeEEEEEc
Confidence 99999999998886443
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.85 E-value=2.6e-20 Score=166.46 Aligned_cols=154 Identities=16% Similarity=0.164 Sum_probs=122.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.+++++...++ ..++.++.+|+.++| ++||+|
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 60 LGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSEN--LRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp TTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCC--CSCEEEEESCGGGCC---CCCSEE
T ss_pred cCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCC--CCCeEEEECChhhCC---CCeeEE
Confidence 445678899999999999999999543 23999999999999999999887654 468999999998776 789999
Q ss_pred EeccccccC--CChHHHHHHHHhcccCCcEEEEEEeccCCCCc------c------hhhHHHHHhhhccCCCCCHHHHHH
Q 020307 237 HAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSST------S------LTGRVLRERILQNYNYLTEEEIED 302 (328)
Q Consensus 237 ~~~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~l~~ 302 (328)
++..+++|+ .++..+++++.++|||||++++.++....... + .....+..........++.+++.+
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 213 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQE 213 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHH
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHH
Confidence 999999999 67899999999999999999999987642111 0 001111111223345679999999
Q ss_pred HHHHCCCeEEEEEE
Q 020307 303 LCTSCGLTNYTSKV 316 (328)
Q Consensus 303 ll~~~Gf~~v~~~~ 316 (328)
+++++||++++...
T Consensus 214 ~l~~aGf~~~~~~~ 227 (287)
T 1kpg_A 214 CASANGFTVTRVQS 227 (287)
T ss_dssp HHHTTTCEEEEEEE
T ss_pred HHHhCCcEEEEEEe
Confidence 99999999988543
No 37
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.85 E-value=1.8e-20 Score=157.96 Aligned_cols=155 Identities=19% Similarity=0.187 Sum_probs=126.1
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++...+ ..++.++.+|+..+++ +++||+|
T Consensus 28 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~-~~~~D~v 101 (199)
T 2xvm_A 28 VKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIEN---LDNLHTRVVDLNNLTF-DRQYDFI 101 (199)
T ss_dssp TTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECCGGGCCC-CCCEEEE
T ss_pred hhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCC---CCCcEEEEcchhhCCC-CCCceEE
Confidence 4445678999999999999999999855 99999999999999999887655 4579999999998887 7899999
Q ss_pred EeccccccCC--ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 237 HAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 237 ~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
++..+++|++ ++..+++++.++|||||++++.++....... ....+...++.+++++++++ |++++.
T Consensus 102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYP---------CTVGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC---------CCSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcC---------CCCCCCCccCHHHHHHHhcC--CeEEEe
Confidence 9999999998 7789999999999999998887765432211 01234567899999999987 988774
Q ss_pred EEe---------------CcEEEEEEeCC
Q 020307 315 KVQ---------------QSFIMFAAQKP 328 (328)
Q Consensus 315 ~~~---------------~~~~~~~a~k~ 328 (328)
... ..+..++++||
T Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~~~arK~ 199 (199)
T 2xvm_A 171 NEDVGELHRTDANGNRIKLRFATMLARKK 199 (199)
T ss_dssp ECCEEEEEEECTTSCEEEEEEEEEEEECC
T ss_pred cccceEEEeecCCCCeeeEEEEEEEEecC
Confidence 321 13567889987
No 38
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.85 E-value=7e-21 Score=165.79 Aligned_cols=143 Identities=13% Similarity=0.177 Sum_probs=118.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC--CCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~i~ 237 (328)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++ ++.++.+|+.+. |+++++||+|+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~-----------~~~~~~~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEG-----------KFNVVKSDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHT-----------TSEEECSCHHHHHHTSCTTCBSEEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHh-----------hcceeeccHHHHhhhcCCCCeeEEE
Confidence 4678999999999999999999866 89999999999999876 277888898765 77889999999
Q ss_pred eccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 238 AGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 238 ~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
+..+++|++++ ..+++++.++|||||++++.+++.... ..+ .. ....+.+..+++.+++.++++++||++++..
T Consensus 107 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 107 ISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL-YSL-IN--FYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH-HHH-HH--HTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred ECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh-HHH-HH--HhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 99999999966 899999999999999999999875421 111 11 1123467889999999999999999998866
Q ss_pred EeCc
Q 020307 316 VQQS 319 (328)
Q Consensus 316 ~~~~ 319 (328)
...+
T Consensus 183 ~~~~ 186 (240)
T 3dli_A 183 FFEE 186 (240)
T ss_dssp EECC
T ss_pred Eecc
Confidence 5543
No 39
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.85 E-value=2.9e-20 Score=169.81 Aligned_cols=162 Identities=17% Similarity=0.133 Sum_probs=129.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.+..+|||||||+|.++..+++..|..+++++|+ +.+++.+++++...++ ..++.++.+|+. .+++. +||+|++.
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~-~~~p~-~~D~v~~~ 242 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL--SGRAQVVVGSFF-DPLPA-GAGGYVLS 242 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTT-SCCCC-SCSEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc--CcCeEEecCCCC-CCCCC-CCcEEEEe
Confidence 4567999999999999999999988889999999 9999999999887654 578999999996 34444 89999999
Q ss_pred cccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEe
Q 020307 240 AALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ 317 (328)
Q Consensus 240 ~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 317 (328)
+++||++++ .++|+++.++|||||++++.++..... .+.....+..........++.++|+++++++||++++....
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPI 321 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred hhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-CccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEEC
Confidence 999999987 789999999999999999999766543 22111111111124456789999999999999999987665
Q ss_pred CcEEEEEEeC
Q 020307 318 QSFIMFAAQK 327 (328)
Q Consensus 318 ~~~~~~~a~k 327 (328)
..+.++.+++
T Consensus 322 ~~~~vie~r~ 331 (332)
T 3i53_A 322 SYVSIVEMTA 331 (332)
T ss_dssp SSSEEEEEEE
T ss_pred CCcEEEEEee
Confidence 5466777664
No 40
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.85 E-value=4.8e-20 Score=170.17 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=133.9
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++...++ ..++.++.+|+.+.|+++. |+|
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~--D~v 260 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV--ADRMRGIAVDIYKESYPEA--DAV 260 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--TTTEEEEECCTTTSCCCCC--SEE
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC--CCCEEEEeCccccCCCCCC--CEE
Confidence 3445678999999999999999999988889999999 9999999999887653 4569999999988776543 999
Q ss_pred EeccccccCCC--hHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhh--h----ccCCCCCHHHHHHHHHHCC
Q 020307 237 HAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI--L----QNYNYLTEEEIEDLCTSCG 308 (328)
Q Consensus 237 ~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~l~~ll~~~G 308 (328)
++.+++||+++ ...+|+++.++|||||++++.++..+....+.....+ ... . ....+++.++|+++++++|
T Consensus 261 ~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~t~~e~~~ll~~aG 339 (359)
T 1x19_A 261 LFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLS-HYILGAGMPFSVLGFKEQARYKEILESLG 339 (359)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHH-HHGGGGGSSCCCCCCCCGGGHHHHHHHHT
T ss_pred EEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHH-HHHHhcCCCCcccCCCCHHHHHHHHHHCC
Confidence 99999999988 6789999999999999999998766533222222222 111 1 1233489999999999999
Q ss_pred CeEEEEEEeCcEEEEEEeCC
Q 020307 309 LTNYTSKVQQSFIMFAAQKP 328 (328)
Q Consensus 309 f~~v~~~~~~~~~~~~a~k~ 328 (328)
|++++........+++++||
T Consensus 340 f~~v~~~~~~~~~vi~a~kp 359 (359)
T 1x19_A 340 YKDVTMVRKYDHLLVQAVKP 359 (359)
T ss_dssp CEEEEEEEETTEEEEEEECC
T ss_pred CceEEEEecCCceEEEEeCC
Confidence 99988766557788999987
No 41
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.85 E-value=2.7e-20 Score=167.68 Aligned_cols=154 Identities=12% Similarity=0.120 Sum_probs=123.7
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++...++ ..++.++.+|+.++ +++||+|
T Consensus 68 ~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---~~~fD~v 141 (302)
T 3hem_A 68 LNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS--PRRKEVRIQGWEEF---DEPVDRI 141 (302)
T ss_dssp TCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC--SSCEEEEECCGGGC---CCCCSEE
T ss_pred cCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECCHHHc---CCCccEE
Confidence 4456788999999999999999999832 5999999999999999999988664 45899999999876 6899999
Q ss_pred EeccccccCCCh---------HHHHHHHHhcccCCcEEEEEEeccCCCCcchh------------hHHHHHhhhccCCCC
Q 020307 237 HAGAALHCWPSP---------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLT------------GRVLRERILQNYNYL 295 (328)
Q Consensus 237 ~~~~vl~h~~d~---------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 295 (328)
++..+++|++|| ..+++++.++|||||++++.++.......... ...+...........
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 221 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLP 221 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCC
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCC
Confidence 999999999887 69999999999999999999987642211000 012222222334678
Q ss_pred CHHHHHHHHHHCCCeEEEEEE
Q 020307 296 TEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 296 ~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
+.+++.++++++||++++...
T Consensus 222 s~~~~~~~l~~aGf~~~~~~~ 242 (302)
T 3hem_A 222 RISQVDYYSSNAGWKVERYHR 242 (302)
T ss_dssp CHHHHHHHHHHHTCEEEEEEE
T ss_pred CHHHHHHHHHhCCcEEEEEEe
Confidence 899999999999999888644
No 42
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=1.5e-20 Score=165.16 Aligned_cols=147 Identities=15% Similarity=0.132 Sum_probs=118.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.++++ .+++.++.+|+..++ ++++||+|
T Consensus 29 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~-~~~~fD~v 99 (259)
T 2p35_A 29 VPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWK-PAQKADLL 99 (259)
T ss_dssp CCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCC-CSSCEEEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcC-ccCCcCEE
Confidence 344567899999999999999999986666999999999999999986 457899999999988 78899999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHh------h----hccCCCCCHHHHHHHHHH
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER------I----LQNYNYLTEEEIEDLCTS 306 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~l~~ll~~ 306 (328)
++..+++|++++..+++++.++|||||++++.++.............+... . ..+..+++.+++.++|++
T Consensus 100 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 179 (259)
T 2p35_A 100 YANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSP 179 (259)
T ss_dssp EEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGG
T ss_pred EEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHh
Confidence 999999999999999999999999999999999764321111011111110 0 235678999999999999
Q ss_pred CCCeEE
Q 020307 307 CGLTNY 312 (328)
Q Consensus 307 ~Gf~~v 312 (328)
+||++.
T Consensus 180 aGf~v~ 185 (259)
T 2p35_A 180 KSSRVD 185 (259)
T ss_dssp GEEEEE
T ss_pred cCCceE
Confidence 999743
No 43
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.85 E-value=9.9e-21 Score=164.79 Aligned_cols=161 Identities=17% Similarity=0.174 Sum_probs=125.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++++|+..++++ ++||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISNLNIN-RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGGCCCS-CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhcC----CCeEEEecccccCCcc-CCceEEEEcC
Confidence 678999999999999999999865 99999999999999999887643 2789999999988876 8899999998
Q ss_pred -ccccC---CChHHHHHHHHhcccCCcEEEEEEeccCCCCcc---------------hhhHH------------------
Q 020307 241 -ALHCW---PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTS---------------LTGRV------------------ 283 (328)
Q Consensus 241 -vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~---------------~~~~~------------------ 283 (328)
+++|+ .++..+|+++.++|||||++++..++....... .+...
T Consensus 110 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (246)
T 1y8c_A 110 DSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGE 189 (246)
T ss_dssp TGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSS
T ss_pred ccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCC
Confidence 99999 456789999999999999999977654210000 00000
Q ss_pred -HHH-hhhccCCCCCHHHHHHHHHHCCCeEEEEEEe---------CcEEEEEEeCC
Q 020307 284 -LRE-RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ---------QSFIMFAAQKP 328 (328)
Q Consensus 284 -~~~-~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~---------~~~~~~~a~k~ 328 (328)
+.. ....+.++++.+++.++|+++||++++.... ...++++++||
T Consensus 190 ~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~ 245 (246)
T 1y8c_A 190 FYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLG 245 (246)
T ss_dssp SEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEEC
T ss_pred cccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEec
Confidence 000 0012457889999999999999999986543 24578888886
No 44
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.85 E-value=2.8e-20 Score=161.84 Aligned_cols=152 Identities=22% Similarity=0.208 Sum_probs=119.7
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. .+++|+|+|+.+++.++++.. ..++.++.+|+..+++++++||+|
T Consensus 39 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 39 LPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGP------DTGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp SCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSC------SSSEEEEECCGGGCCCCTTCEEEE
T ss_pred ccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcc------cCCceEEEcChhhccCCCCCceEE
Confidence 4455788999999999999999998853 389999999999999988643 237899999999888888899999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCC--CCc-chh-----------h---------HHHHHhhhccCC
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT--SST-SLT-----------G---------RVLRERILQNYN 293 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~--~~~-~~~-----------~---------~~~~~~~~~~~~ 293 (328)
++..+++|++++..+++++.++|||||++++.+++... ... .|. . ..+.. ...+..
T Consensus 112 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 190 (243)
T 3bkw_A 112 YSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLA-KGVVKH 190 (243)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHH-HSCCEE
T ss_pred EEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeecc-CceEEE
Confidence 99999999999999999999999999999998865320 000 000 0 00000 012334
Q ss_pred CCCHHHHHHHHHHCCCeEEEEEE
Q 020307 294 YLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 294 ~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
+++.+++.++|+++||++++...
T Consensus 191 ~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 191 HRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp ECCHHHHHHHHHHTTCEEEEEEE
T ss_pred eccHHHHHHHHHHcCCEeeeecc
Confidence 47899999999999999988654
No 45
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.85 E-value=5.6e-21 Score=171.44 Aligned_cols=149 Identities=9% Similarity=0.081 Sum_probs=111.0
Q ss_pred cCCCeEEEEcCCcCHHHH----HHHHhCCCceE--EEEeCCHHHHHHHHHHHHhcCcCCCCCeEE--EEecCCCCC----
Q 020307 160 AQGGLLVDVSCGSGLFSR----KFAKSGTYSGV--VALDFSENMLRQCYDFIKQDNTILTSNLAL--VRADVCRLP---- 227 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~----~l~~~~~~~~v--~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~--~~~d~~~lp---- 227 (328)
.++.+|||||||+|.++. .++..++...+ +|+|+|++|++.|++++..... ..++.+ ..++++.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN--LENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS--CTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC--CCcceEEEEecchhhhhhhhc
Confidence 456799999999997554 44444555544 9999999999999998865311 345544 445554443
Q ss_pred --CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhh-----hccCCCCCHHHH
Q 020307 228 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI-----LQNYNYLTEEEI 300 (328)
Q Consensus 228 --~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l 300 (328)
+++++||+|++.+++||++|+..+|+++.++|||||++++.+...... + ...+.... ..+..+++.+++
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSG---W-DKLWKKYGSRFPQDDLCQYITSDDL 204 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSH---H-HHHHHHHGGGSCCCTTCCCCCHHHH
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCcc---H-HHHHHHHHHhccCCCcccCCCHHHH
Confidence 567899999999999999999999999999999999999987654322 1 22222211 135678999999
Q ss_pred HHHHHHCCCeEEEE
Q 020307 301 EDLCTSCGLTNYTS 314 (328)
Q Consensus 301 ~~ll~~~Gf~~v~~ 314 (328)
.++|+++||+++..
T Consensus 205 ~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 205 TQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHHCCCceEEE
Confidence 99999999998763
No 46
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.85 E-value=1.7e-20 Score=161.11 Aligned_cols=148 Identities=20% Similarity=0.329 Sum_probs=122.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..++.. +|+|+|+.+++.++++ ++.++.+|+..+++++++||+|++..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~ 110 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMVT 110 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEES
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEcc
Confidence 3789999999999999887653 9999999999999873 67899999999988888999999999
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH-----hhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 241 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE-----RILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 241 vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
+++|++++..+|+++.++|||||++++.+++..... ...+.. ....+..+++.+++.++++++||++++..
T Consensus 111 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 111 TICFVDDPERALKEAYRILKKGGYLIVGIVDRESFL----GREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHH----HHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred hHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHH----HHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 999999999999999999999999999998754321 111111 11245678999999999999999988864
Q ss_pred Ee---C-----------------cEEEEEEeCC
Q 020307 316 VQ---Q-----------------SFIMFAAQKP 328 (328)
Q Consensus 316 ~~---~-----------------~~~~~~a~k~ 328 (328)
.. . .|+++.|+|.
T Consensus 187 ~~~~~~p~~~~~~~~~~~~~~~~~~~~i~a~K~ 219 (219)
T 1vlm_A 187 QTLFKHPSELSEIEPVKEGYGEGAFVVIRGTKK 219 (219)
T ss_dssp EECCSCGGGCSSCCCCEESSSSSSEEEEEEECC
T ss_pred cccCCCCCccccchhhhcCCCCCeEEEEEecCC
Confidence 42 1 4788888884
No 47
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.84 E-value=1.4e-19 Score=167.73 Aligned_cols=164 Identities=12% Similarity=0.089 Sum_probs=133.8
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
...+..+|||||||+|.++..+++.+|..+++++|+ +.+++.|++++...++ ..++.++.+|+. .+++. .||+|+
T Consensus 199 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l--~~~v~~~~~d~~-~~~p~-~~D~v~ 273 (369)
T 3gwz_A 199 DFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL--ADRCEILPGDFF-ETIPD-GADVYL 273 (369)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTT-TCCCS-SCSEEE
T ss_pred CCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc--CCceEEeccCCC-CCCCC-CceEEE
Confidence 345678999999999999999999988889999999 9999999999887664 578999999997 45555 799999
Q ss_pred eccccccCCChH--HHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHH--HHhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 238 AGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVL--RERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 238 ~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
+.+++||++++. ++|+++.++|||||++++.++.......+. ...+ ..........++.++|+++++++||++++
T Consensus 274 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 274 IKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDLLLLVLVGGAERSESEFAALLEKSGLRVER 352 (369)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEE
T ss_pred hhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEE
Confidence 999999999886 799999999999999999998765433332 1111 11112445678999999999999999999
Q ss_pred EEE--eCcEEEEEEeC
Q 020307 314 SKV--QQSFIMFAAQK 327 (328)
Q Consensus 314 ~~~--~~~~~~~~a~k 327 (328)
... ...+.++.++|
T Consensus 353 ~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 353 SLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEECSSSSEEEEEEEE
T ss_pred EEECCCCCcEEEEEEe
Confidence 766 45678888876
No 48
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=7e-21 Score=161.81 Aligned_cols=144 Identities=12% Similarity=0.093 Sum_probs=112.0
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCc---------CCCCCeEEEEecCCCCCC
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT---------ILTSNLALVRADVCRLPF 228 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~---------~~~~~i~~~~~d~~~lp~ 228 (328)
...++.+|||+|||+|..+..|++.+. +|+|+|+|+.|++.|+++...... ....++.++++|+.++++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~ 96 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 96 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc
Confidence 345678999999999999999999976 999999999999999987642100 003579999999999987
Q ss_pred CC-CccceEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHH
Q 020307 229 AS-GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCT 305 (328)
Q Consensus 229 ~~-~~fD~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~ 305 (328)
.+ ++||+|++..+++|++.. ..+++++.++|||||++++.+...... ........++.+++.++++
T Consensus 97 ~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~-----------~~~~~~~~~~~~el~~~~~ 165 (203)
T 1pjz_A 97 RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA-----------LLEGPPFSVPQTWLHRVMS 165 (203)
T ss_dssp HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS-----------SSSSCCCCCCHHHHHHTSC
T ss_pred ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc-----------ccCCCCCCCCHHHHHHHhc
Confidence 65 799999999999999754 468999999999999966555433211 0112223478999999999
Q ss_pred HCCCeEEEEE
Q 020307 306 SCGLTNYTSK 315 (328)
Q Consensus 306 ~~Gf~~v~~~ 315 (328)
. ||+++...
T Consensus 166 ~-gf~i~~~~ 174 (203)
T 1pjz_A 166 G-NWEVTKVG 174 (203)
T ss_dssp S-SEEEEEEE
T ss_pred C-CcEEEEec
Confidence 9 99877643
No 49
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.84 E-value=3.9e-21 Score=169.67 Aligned_cols=158 Identities=19% Similarity=0.200 Sum_probs=121.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++ ..++.++++|+.++++ +++||+|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRR--------NPDAVLHHGDMRDFSL-GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTCCC-SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhh--------CCCCEEEECChHHCCc-cCCcCEEEEc
Confidence 3568999999999999999999876 999999999999999987 4578999999999887 7899999999
Q ss_pred c-ccccCCC---hHHHHHHHHhcccCCcEEEEEEeccCCCCcch-hh----------------------------HH---
Q 020307 240 A-ALHCWPS---PSNAVAEISRILRSGGVFVGTTFLRYTSSTSL-TG----------------------------RV--- 283 (328)
Q Consensus 240 ~-vl~h~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~----------------------------~~--- 283 (328)
. +++|+++ ...+|+++.++|||||++++.++..+....+. .. ..
T Consensus 118 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
T 3pfg_A 118 FSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVA 197 (263)
T ss_dssp TTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEe
Confidence 8 9999974 45789999999999999999754332211000 00 00
Q ss_pred -----HHH-hhhccCCCCCHHHHHHHHHHCCCeEEEEEEe-CcEEEEEEeCC
Q 020307 284 -----LRE-RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ-QSFIMFAAQKP 328 (328)
Q Consensus 284 -----~~~-~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~-~~~~~~~a~k~ 328 (328)
+.. ....+..+|+.+++.++|+++||++++.... ....+++++||
T Consensus 198 ~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 249 (263)
T 3pfg_A 198 GPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPG 249 (263)
T ss_dssp ETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred cCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecC
Confidence 000 0002366899999999999999998885332 22356777775
No 50
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.84 E-value=4.7e-20 Score=157.19 Aligned_cols=133 Identities=26% Similarity=0.318 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..+ + ..+++|+|+|+.+++.++++ ..++.++.+|+.++|+++++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~-~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---P-YPQKVGVEPSEAMLAVGRRR--------APEATWVRAWGEALPFPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---C-CSEEEEECCCHHHHHHHHHH--------CTTSEEECCCTTSCCSCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC---C-CCeEEEEeCCHHHHHHHHHh--------CCCcEEEEcccccCCCCCCcEEEEEEcC
Confidence 6789999999999999887 2 22899999999999999986 3578899999999998889999999999
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH---hhhccCCCCCHHHHHHHHHHCC
Q 020307 241 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE---RILQNYNYLTEEEIEDLCTSCG 308 (328)
Q Consensus 241 vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~ll~~~G 308 (328)
+++|++++..+++++.++|||||++++.+++..+..... ...... ....|.++++.++++++++ |
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 104 TLEFVEDVERVLLEARRVLRPGGALVVGVLEALSPWAAL-YRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp CTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHH-HHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHH-HHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 999999999999999999999999999998765322211 111111 1125778999999999999 7
No 51
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.84 E-value=6.9e-20 Score=162.56 Aligned_cols=156 Identities=13% Similarity=0.187 Sum_probs=123.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHH------HHHHHHHHHHhcCcCCCCCeEEEEec---CCCC
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSEN------MLRQCYDFIKQDNTILTSNLALVRAD---VCRL 226 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~------~~~~a~~~~~~~~~~~~~~i~~~~~d---~~~l 226 (328)
+...++.+|||||||+|.++..+++. ++..+|+|+|+|+. +++.+++++...++ ..++.++.+| ...+
T Consensus 39 ~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~ 116 (275)
T 3bkx_A 39 WQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL--GDRLTVHFNTNLSDDLG 116 (275)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT--GGGEEEECSCCTTTCCG
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC--CCceEEEECChhhhccC
Confidence 44567889999999999999999998 46579999999997 99999999877553 3689999998 4566
Q ss_pred CCCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhH---HHH-----Hh----hhccCCC
Q 020307 227 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGR---VLR-----ER----ILQNYNY 294 (328)
Q Consensus 227 p~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~---~~~-----~~----~~~~~~~ 294 (328)
|+++++||+|++..+++|++++..+++.+.++++|||++++.++............ .+. .. ...+..+
T Consensus 117 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTL 196 (275)
T ss_dssp GGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCC
T ss_pred CCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccccccc
Confidence 77789999999999999999999977777888888999999998764322111111 111 11 1234468
Q ss_pred CCHHHHHHHHHHCCCeEEEE
Q 020307 295 LTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 295 ~~~~~l~~ll~~~Gf~~v~~ 314 (328)
++.+++.++++++||++++.
T Consensus 197 ~s~~~l~~~l~~aGf~~~~~ 216 (275)
T 3bkx_A 197 ITPDTLAQIAHDNTWTYTAG 216 (275)
T ss_dssp CCHHHHHHHHHHHTCEEEEC
T ss_pred CCHHHHHHHHHHCCCeeEEE
Confidence 99999999999999998874
No 52
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.84 E-value=3.9e-20 Score=160.50 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=116.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+. ..++.++++|+.+++ ++++||+|++..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~-~~~~fD~v~~~~ 140 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSSPK--AEYFSFVKEDVFTWR-PTELFDLIFDYV 140 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTSGG--GGGEEEECCCTTTCC-CSSCEEEEEEES
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhccCC--CcceEEEECchhcCC-CCCCeeEEEECh
Confidence 346999999999999999988654 899999999999999998875332 457999999999877 456999999999
Q ss_pred ccccCC--ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 241 ALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 241 vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
+++|++ ++..+++++.++|||||++++.++...... ..+...++.+++.++++++||++++...
T Consensus 141 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 141 FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHV------------GGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCC------------SCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccC------------CCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 999998 888999999999999999999886543211 1233458999999999999999988644
No 53
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.84 E-value=2e-20 Score=164.73 Aligned_cols=148 Identities=20% Similarity=0.235 Sum_probs=117.9
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++ ... ..++.++.+|+..+|+++++||+|++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~-~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~ 110 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKI-AGV---DRKVQVVQADARAIPLPDESVHGVIV 110 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHT-TTS---CTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHh-hcc---CCceEEEEcccccCCCCCCCeeEEEE
Confidence 35678999999999999999998864 9999999999999999987 222 56899999999999988899999999
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcc--hhhHHHHH---hhh----ccCCCCCHHHHHHHHHHCCC
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTS--LTGRVLRE---RIL----QNYNYLTEEEIEDLCTSCGL 309 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~--~~~~~~~~---~~~----~~~~~~~~~~l~~ll~~~Gf 309 (328)
..+++|++++..+++++.++|||||++++...... ... .+...+.. ... .+..+++.+++.++++++||
T Consensus 111 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 188 (263)
T 2yqz_A 111 VHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQAE--ASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGL 188 (263)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEEEC--CCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCchhhcCCHHHHHHHHHHHCCCCcEEEEEecCCC--ccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCC
Confidence 99999999999999999999999999998832221 111 01111111 111 13356788999999999999
Q ss_pred eEEEE
Q 020307 310 TNYTS 314 (328)
Q Consensus 310 ~~v~~ 314 (328)
+++..
T Consensus 189 ~~~~~ 193 (263)
T 2yqz_A 189 KPRTR 193 (263)
T ss_dssp CCEEE
T ss_pred CcceE
Confidence 97763
No 54
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.84 E-value=1.2e-20 Score=164.47 Aligned_cols=145 Identities=12% Similarity=0.143 Sum_probs=119.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.+++++...+ ..++.++.+|+..+++++++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 57899999999999999998876 4599999999999999999876643 3468999999998888888999999999
Q ss_pred ccccCCChH--HHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEe
Q 020307 241 ALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ 317 (328)
Q Consensus 241 vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 317 (328)
+++|++++. .+++++.++|||||++++.++.... ..... ...+...++.+++.++++++||++++....
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE--GVILD------DVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS--SEEEE------TTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC--cceec------ccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 999999865 8999999999999999999876543 11100 012223458999999999999999986553
No 55
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.83 E-value=1.6e-19 Score=157.09 Aligned_cols=160 Identities=18% Similarity=0.241 Sum_probs=122.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..+++. .+++|+|+|+.+++.|+++.... ..++.++.+|+.+++++ ++||+|++..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~-~~fD~v~~~~ 104 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET----NRHVDFWVQDMRELELP-EPVDAITILC 104 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCGGGCCCS-SCEEEEEECT
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc----CCceEEEEcChhhcCCC-CCcCEEEEeC
Confidence 4689999999999999999887 39999999999999999988764 35789999999888865 7899999986
Q ss_pred -ccccCC---ChHHHHHHHHhcccCCcEEEEEEeccCCC--C---cc---------hh-hH--------------HH---
Q 020307 241 -ALHCWP---SPSNAVAEISRILRSGGVFVGTTFLRYTS--S---TS---------LT-GR--------------VL--- 284 (328)
Q Consensus 241 -vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~--~---~~---------~~-~~--------------~~--- 284 (328)
+++|+. ++..+++++.++|||||++++..++.... . .. .. .. .+
T Consensus 105 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (243)
T 3d2l_A 105 DSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEG 184 (243)
T ss_dssp TGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEEC
T ss_pred CchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEEc
Confidence 999994 44688999999999999999977643200 0 00 00 00 00
Q ss_pred HH------hhhccCCCCCHHHHHHHHHHCCCeEEEEEEe---------CcEEEEEEeCC
Q 020307 285 RE------RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ---------QSFIMFAAQKP 328 (328)
Q Consensus 285 ~~------~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~---------~~~~~~~a~k~ 328 (328)
.. ....+.++++.+++.++|+++||++++.... ....+++|+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K~ 243 (243)
T 3d2l_A 185 EDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEKI 243 (243)
T ss_dssp TTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEEC
T ss_pred CCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEeC
Confidence 00 0012446799999999999999999886542 34578889986
No 56
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.83 E-value=9.7e-21 Score=167.38 Aligned_cols=162 Identities=20% Similarity=0.277 Sum_probs=117.7
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC--C------------------------
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--L------------------------ 212 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--~------------------------ 212 (328)
..++.+|||||||+|.++..++..+. .+|+|+|+|+.+++.|+++++..... +
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 34678999999999988777766652 37999999999999999876542100 0
Q ss_pred CCCeE-EEEecCCCC-CC---CCCccceEEeccccccC-C---ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHH
Q 020307 213 TSNLA-LVRADVCRL-PF---ASGFVDAVHAGAALHCW-P---SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRV 283 (328)
Q Consensus 213 ~~~i~-~~~~d~~~l-p~---~~~~fD~i~~~~vl~h~-~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~ 283 (328)
..++. ++++|+.+. |+ ..++||+|+++.+|||+ + +...+++++.++|||||+|++.+........ .+
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~--~g-- 207 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM--VG-- 207 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE--ET--
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce--eC--
Confidence 01233 889999773 43 25789999999999996 3 4468999999999999999999864321110 00
Q ss_pred HHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEeC-----------cEEEEEEeCC
Q 020307 284 LRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ-----------SFIMFAAQKP 328 (328)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~-----------~~~~~~a~k~ 328 (328)
........++.+++.++|+++||++++..... .+++++|+|+
T Consensus 208 ---~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 208 ---KREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKK 260 (263)
T ss_dssp ---TEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred ---CeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEec
Confidence 00122346799999999999999988865432 5678888874
No 57
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.83 E-value=1.7e-20 Score=161.21 Aligned_cols=160 Identities=16% Similarity=0.189 Sum_probs=121.1
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC---CCC-CCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---PFA-SGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l---p~~-~~~ 232 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ .++.+..+|+..+ ++. +++
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTCSCCCCC
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhcccccccCCC
Confidence 4445678999999999999999999865 999999999999999884 4667888887665 444 445
Q ss_pred cceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcc-----hhhHHHHH----hhhccCCCCCHHHHHHH
Q 020307 233 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTS-----LTGRVLRE----RILQNYNYLTEEEIEDL 303 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~l~~l 303 (328)
||+|++..+++ ..++..+++++.++|||||++++.+++....... +....+.. ....+..+++.+++.++
T Consensus 117 fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (227)
T 3e8s_A 117 YDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNA 195 (227)
T ss_dssp EEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHH
T ss_pred ccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHH
Confidence 99999999999 8899999999999999999999999876432211 00000000 01233456799999999
Q ss_pred HHHCCCeEEEEEEe-------CcEEEEEEeCC
Q 020307 304 CTSCGLTNYTSKVQ-------QSFIMFAAQKP 328 (328)
Q Consensus 304 l~~~Gf~~v~~~~~-------~~~~~~~a~k~ 328 (328)
|+++||++++.... ..-.+++++||
T Consensus 196 l~~aGf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 196 LDMAGLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp HHHTTEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred HHHcCCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 99999999986441 11366777775
No 58
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.83 E-value=1.2e-19 Score=164.53 Aligned_cols=152 Identities=16% Similarity=0.206 Sum_probs=121.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.+++++...++ ..++.++.+|+.++| ++||+
T Consensus 86 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~---~~fD~ 158 (318)
T 2fk8_A 86 LDLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASIDT--NRSRQVLLQGWEDFA---EPVDR 158 (318)
T ss_dssp SCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTSCC--SSCEEEEESCGGGCC---CCCSE
T ss_pred cCCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECChHHCC---CCcCE
Confidence 44567889999999999999999988 54 999999999999999999887653 457999999998775 68999
Q ss_pred EEeccccccC--CChHHHHHHHHhcccCCcEEEEEEeccCCCCc------ch------hhHHHHHhhhccCCCCCHHHHH
Q 020307 236 VHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSST------SL------TGRVLRERILQNYNYLTEEEIE 301 (328)
Q Consensus 236 i~~~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~l~ 301 (328)
|++..+++|+ +++..+++++.++|||||++++.++....... +. ....+...........+.+++.
T Consensus 159 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 238 (318)
T 2fk8_A 159 IVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMV 238 (318)
T ss_dssp EEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHH
T ss_pred EEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHH
Confidence 9999999999 57889999999999999999999987653111 00 0011111111334567999999
Q ss_pred HHHHHCCCeEEEEE
Q 020307 302 DLCTSCGLTNYTSK 315 (328)
Q Consensus 302 ~ll~~~Gf~~v~~~ 315 (328)
++++++||++++..
T Consensus 239 ~~l~~aGf~~~~~~ 252 (318)
T 2fk8_A 239 EHGEKAGFTVPEPL 252 (318)
T ss_dssp HHHHHTTCBCCCCE
T ss_pred HHHHhCCCEEEEEE
Confidence 99999999987743
No 59
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.83 E-value=3.1e-19 Score=165.56 Aligned_cols=166 Identities=14% Similarity=0.173 Sum_probs=126.2
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.|++++...++ ..++.++.+|+.+ +++. .||+|
T Consensus 178 ~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~-~~D~v 252 (374)
T 1qzz_A 178 YDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL--ADRVTVAEGDFFK-PLPV-TADVV 252 (374)
T ss_dssp SCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCSC-CEEEE
T ss_pred CCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC-cCCC-CCCEE
Confidence 3445678999999999999999999988889999999 9999999999887653 4589999999865 3433 49999
Q ss_pred EeccccccCCChH--HHHHHHHhcccCCcEEEEEEe--ccCCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHHCCCe
Q 020307 237 HAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTF--LRYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTSCGLT 310 (328)
Q Consensus 237 ~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ll~~~Gf~ 310 (328)
++.+++||++++. .+|+++.++|||||++++.++ .......+.....+.. ....+...++.+++.++++++||+
T Consensus 253 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 332 (374)
T 1qzz_A 253 LLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLA 332 (374)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEE
T ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 9999999999885 899999999999999999887 4322111111111111 111235678999999999999999
Q ss_pred EEEEEEeCc-E-----EEEEEeC
Q 020307 311 NYTSKVQQS-F-----IMFAAQK 327 (328)
Q Consensus 311 ~v~~~~~~~-~-----~~~~a~k 327 (328)
+++....+. + .++.++|
T Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 333 LASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp EEEEEEECCSSCSSCEEEEEEEE
T ss_pred eEEEEECCCCcccCCcEEEEEEE
Confidence 888655433 3 6677765
No 60
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.82 E-value=3.6e-19 Score=164.26 Aligned_cols=167 Identities=16% Similarity=0.227 Sum_probs=129.5
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...++ ..++.++.+|+.+ +++. .||+|
T Consensus 179 ~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~-~~D~v 253 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL--SDRVDVVEGDFFE-PLPR-KADAI 253 (360)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCSS-CEEEE
T ss_pred CCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC-CCCC-CccEE
Confidence 3445678999999999999999999988889999999 9999999999887653 4589999999865 3334 49999
Q ss_pred EeccccccCCCh--HHHHHHHHhcccCCcEEEEEEec-cCCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHHCCCeE
Q 020307 237 HAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFL-RYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTSCGLTN 311 (328)
Q Consensus 237 ~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ll~~~Gf~~ 311 (328)
++.+++||++++ ..+++++.++|||||++++.++. .+....+.....+.. ....+...++.++++++++++||++
T Consensus 254 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 333 (360)
T 1tw3_A 254 ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVV 333 (360)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEE
T ss_pred EEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeE
Confidence 999999999988 48999999999999999999876 322111111111111 1112456789999999999999998
Q ss_pred EEEEEe-Cc-----EEEEEEeCC
Q 020307 312 YTSKVQ-QS-----FIMFAAQKP 328 (328)
Q Consensus 312 v~~~~~-~~-----~~~~~a~k~ 328 (328)
++.... .. +.++.++|+
T Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 334 EEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEEeCCCCcccCccEEEEEEeC
Confidence 886554 32 677888764
No 61
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.82 E-value=2.1e-19 Score=164.15 Aligned_cols=165 Identities=14% Similarity=0.181 Sum_probs=130.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++..+..+++++|++ .+++.|++++...++ ..++.++.+|+.+.+++++ ||+|++.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~-~D~v~~~ 239 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV--ASRYHTIAGSAFEVDYGND-YDLVLLP 239 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC--GGGEEEEESCTTTSCCCSC-EEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC--CcceEEEecccccCCCCCC-CcEEEEc
Confidence 56789999999999999999999877899999999 999999999877653 3479999999988776554 9999999
Q ss_pred cccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCC-CcchhhHHHH---HhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 240 AALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTS-STSLTGRVLR---ERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 240 ~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
++++|++++ ..+|+++.++|||||++++.++..... ..+.....+. .....+...++.+++.++++++||+.++
T Consensus 240 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~ 319 (335)
T 2r3s_A 240 NFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQ 319 (335)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEE
T ss_pred chhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeee
Confidence 999999766 689999999999999999999876532 2222111111 1111356789999999999999999988
Q ss_pred EEEe-CcEEEEEEeCC
Q 020307 314 SKVQ-QSFIMFAAQKP 328 (328)
Q Consensus 314 ~~~~-~~~~~~~a~k~ 328 (328)
.... +.+.++.+++|
T Consensus 320 ~~~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 320 LHSLPTTQQQVIVAYK 335 (335)
T ss_dssp EECCTTSSSEEEEEEC
T ss_pred EEECCCCceeEEEecC
Confidence 6543 33455666654
No 62
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.82 E-value=5.7e-20 Score=161.95 Aligned_cols=161 Identities=17% Similarity=0.275 Sum_probs=123.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC--------------C------------C
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--------------L------------T 213 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~--------------~------------~ 213 (328)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.+++++...+.. . .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4567999999999999999888764 58999999999999999887542100 0 0
Q ss_pred CCe-EEEEecCCCCC-CCC---CccceEEeccccc----cCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHH
Q 020307 214 SNL-ALVRADVCRLP-FAS---GFVDAVHAGAALH----CWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVL 284 (328)
Q Consensus 214 ~~i-~~~~~d~~~lp-~~~---~~fD~i~~~~vl~----h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 284 (328)
.++ .++.+|+.+.+ +++ ++||+|++..+++ |++++..+++++.++|||||++++.++....... .
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~-~----- 207 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYM-I----- 207 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE-E-----
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEE-c-----
Confidence 027 89999998754 345 7999999999999 6667789999999999999999998865431100 0
Q ss_pred HHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEeC-----------cEEEEEEeCC
Q 020307 285 RERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ-----------SFIMFAAQKP 328 (328)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~-----------~~~~~~a~k~ 328 (328)
.....+...++.+++.++++++||++++..... .+++++++|+
T Consensus 208 -~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 208 -GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp -TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred -CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 011123457899999999999999998865543 4677888885
No 63
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.82 E-value=5.5e-20 Score=159.54 Aligned_cols=158 Identities=20% Similarity=0.214 Sum_probs=121.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe-
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA- 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~- 238 (328)
.++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.++++ ..++.++.+|+..+++ +++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKR--------LPDATLHQGDMRDFRL-GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHH--------CTTCEEEECCTTTCCC-SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHh--------CCCCEEEECCHHHccc-CCCCcEEEEc
Confidence 4678999999999999999999976 999999999999999986 4578999999998887 678999995
Q ss_pred ccccccCCCh---HHHHHHHHhcccCCcEEEEEEeccCCCCcch---------------------------------hhH
Q 020307 239 GAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLRYTSSTSL---------------------------------TGR 282 (328)
Q Consensus 239 ~~vl~h~~d~---~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~---------------------------------~~~ 282 (328)
..+++|++++ ..+|+++.++|||||++++.++.......+. ...
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVA 187 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEe
Confidence 5599999654 6889999999999999999876554221100 000
Q ss_pred HHHH-----hhhccCCCCCHHHHHHHHHHCCCeEEEEEEe-CcEEEEEEeCC
Q 020307 283 VLRE-----RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ-QSFIMFAAQKP 328 (328)
Q Consensus 283 ~~~~-----~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~-~~~~~~~a~k~ 328 (328)
.-.. ....+..+++.++++++|+++||+++..... ....+++|+||
T Consensus 188 ~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 239 (239)
T 3bxo_A 188 DPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVPA 239 (239)
T ss_dssp ETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred cCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEecC
Confidence 0000 0012446899999999999999976664332 34578888886
No 64
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.82 E-value=1.6e-19 Score=161.70 Aligned_cols=114 Identities=22% Similarity=0.249 Sum_probs=98.1
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC-CCCCeEEEEecCCCCC---CCCCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI-LTSNLALVRADVCRLP---FASGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~-~~~~i~~~~~d~~~lp---~~~~~ 232 (328)
+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++....+.. ...++.+..+|+..++ +++++
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 130 (293)
T 3thr_A 53 LRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDG 130 (293)
T ss_dssp HHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTC
T ss_pred hcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCC
Confidence 4455778999999999999999999976 9999999999999999876432210 0247889999998887 78899
Q ss_pred cceEEec-cccccCCC-------hHHHHHHHHhcccCCcEEEEEEecc
Q 020307 233 VDAVHAG-AALHCWPS-------PSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 233 fD~i~~~-~vl~h~~d-------~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
||+|++. .+++|+++ +..+++++.++|||||++++.+++.
T Consensus 131 fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 131 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp EEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred eEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 9999998 89999999 8999999999999999999998764
No 65
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=2.7e-19 Score=157.00 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=111.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHh----------cCc----CCCCCeEEEEecCCC
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ----------DNT----ILTSNLALVRADVCR 225 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~----------~~~----~~~~~i~~~~~d~~~ 225 (328)
.++.+|||+|||+|..+..|++.|. +|+|+|+|+.+++.|+++... .+. ....++.++++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 4678999999999999999999976 999999999999999876531 000 003589999999999
Q ss_pred CCCCC-CccceEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHH
Q 020307 226 LPFAS-GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIED 302 (328)
Q Consensus 226 lp~~~-~~fD~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 302 (328)
+++.+ ++||+|++..+++|++.+ ..+++++.++|||||++++.+....... .......++++++.+
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~-----------~~g~~~~~~~~el~~ 213 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK-----------HAGPPFYVPSAELKR 213 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS-----------CCCSSCCCCHHHHHH
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc-----------CCCCCCCCCHHHHHH
Confidence 98764 899999999999999754 5789999999999999987665432110 011223479999999
Q ss_pred HHHHCCCeEEEEE
Q 020307 303 LCTSCGLTNYTSK 315 (328)
Q Consensus 303 ll~~~Gf~~v~~~ 315 (328)
+++. +|+++...
T Consensus 214 ~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 214 LFGT-KCSMQCLE 225 (252)
T ss_dssp HHTT-TEEEEEEE
T ss_pred HhhC-CeEEEEEe
Confidence 9988 59887654
No 66
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.82 E-value=1.3e-19 Score=163.05 Aligned_cols=164 Identities=15% Similarity=0.204 Sum_probs=121.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec-
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG- 239 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~- 239 (328)
++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++...+.....++.++++|+.++++ +++||+|++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~ 158 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISS 158 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECC
Confidence 345999999999999999999865 999999999999999999876431001589999999999887 6899999865
Q ss_pred cccccCCC--hHHHHHHHHhcccCCcEEEEEEeccCCCCcchh----------hHHHHH---------------------
Q 020307 240 AALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLT----------GRVLRE--------------------- 286 (328)
Q Consensus 240 ~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~----------~~~~~~--------------------- 286 (328)
.+++|++. ...+|+++.++|||||++++.+++......... +..+..
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 3g2m_A 159 GSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADET 238 (299)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC-
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCC
Confidence 55666652 478999999999999999999987652100000 000000
Q ss_pred -----hhhccCCCCCHHHHHHHHHHCCCeEEEEEEeC-------cEEEEEEeC
Q 020307 287 -----RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ-------SFIMFAAQK 327 (328)
Q Consensus 287 -----~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~-------~~~~~~a~k 327 (328)
....+.++|+.+++.++|+++||++++..... ...++.+.+
T Consensus 239 ~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~ 291 (299)
T 3g2m_A 239 TDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM 291 (299)
T ss_dssp -CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred CCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence 01133457899999999999999999865432 246666654
No 67
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.81 E-value=7.5e-20 Score=157.45 Aligned_cols=160 Identities=20% Similarity=0.252 Sum_probs=120.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.++++.... ..++.++.+|+.++++++++||+|++..
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 111 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR----ESNVEFIVGDARKLSFEDKTFDYVIFID 111 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCCceEEECchhcCCCCCCcEEEEEEcC
Confidence 477999999999999999999987 9999999999999999988764 3689999999999888888999999999
Q ss_pred c--cccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhH-----HH-HHhh-h-------------------ccC
Q 020307 241 A--LHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGR-----VL-RERI-L-------------------QNY 292 (328)
Q Consensus 241 v--l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~-----~~-~~~~-~-------------------~~~ 292 (328)
+ ++|.+++..+++++.++|||||++++.+++........... .+ .... + .+.
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (227)
T 1ve3_A 112 SIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRF 191 (227)
T ss_dssp CGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEE
T ss_pred chHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeeh
Confidence 9 55556778999999999999999999988643211111000 00 0000 0 011
Q ss_pred CCCCHHHHHHHHHHCCCeEEEEEEeCcE-EEEEEeC
Q 020307 293 NYLTEEEIEDLCTSCGLTNYTSKVQQSF-IMFAAQK 327 (328)
Q Consensus 293 ~~~~~~~l~~ll~~~Gf~~v~~~~~~~~-~~~~a~k 327 (328)
..++. ++.++|+++||+.++....+.+ +++...|
T Consensus 192 ~~w~~-~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 192 NVWGK-TGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp ECCCH-HHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhhch-HHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 23334 8899999999999987766644 4444443
No 68
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.81 E-value=2.3e-19 Score=165.81 Aligned_cols=163 Identities=11% Similarity=0.096 Sum_probs=126.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC--CCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~i~ 237 (328)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.|++++...++ ..++.++.+|+... |++ ++||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~p-~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG--SERIHGHGANLLDRDVPFP-TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT--GGGEEEEECCCCSSSCCCC-CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc--ccceEEEEccccccCCCCC-CCcCEEE
Confidence 4568999999999999999999988889999999 9999999999877553 45899999999875 455 7899999
Q ss_pred eccccccCCChH--HHHHHHHhcccCCcEEEEEEeccCCCCcchh-h-HHHHH-----hhhccCCCCCHHHHHHHHHHCC
Q 020307 238 AGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLT-G-RVLRE-----RILQNYNYLTEEEIEDLCTSCG 308 (328)
Q Consensus 238 ~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~~~~~l~~ll~~~G 308 (328)
+.+++||++++. .+|+++.++|||||++++.++.......... . ..... ........++.++++++++++|
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AG 333 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAG 333 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTT
T ss_pred EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcC
Confidence 999999998874 7899999999999999999976543222110 0 00011 1123445779999999999999
Q ss_pred CeEEEEEEe--CcEEEEEEe
Q 020307 309 LTNYTSKVQ--QSFIMFAAQ 326 (328)
Q Consensus 309 f~~v~~~~~--~~~~~~~a~ 326 (328)
|++++.... ....++.++
T Consensus 334 f~~v~~~~~~g~~~svi~~~ 353 (363)
T 3dp7_A 334 LEVEEIQDNIGLGHSILQCR 353 (363)
T ss_dssp EEESCCCCCBTTTBEEEEEE
T ss_pred CeEEEEEeCCCCCceEEEEe
Confidence 998886532 224555554
No 69
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=4.9e-19 Score=148.33 Aligned_cols=139 Identities=17% Similarity=0.175 Sum_probs=118.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ ..++.++.+|+..+++++++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQD--------FPEARWVVGDLSVDQISETDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTSCCCCCCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHh--------CCCCcEEEcccccCCCCCCceeEEEEC
Confidence 4678999999999999999999865 999999999999999986 457899999999888888899999998
Q ss_pred -cccccCCC--hHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 240 -AALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 240 -~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
.+++|++. ...+++++.++|||||++++..+... .++.+++.++++++||++++...
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------------------~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR--------------------GWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS--------------------SCCHHHHHHHHHHHTEEEEEEES
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC--------------------CcCHHHHHHHHHHcCCEEeeeec
Confidence 78999854 47899999999999999999875432 26889999999999999887543
Q ss_pred ---------eCcEEEEEEeCC
Q 020307 317 ---------QQSFIMFAAQKP 328 (328)
Q Consensus 317 ---------~~~~~~~~a~k~ 328 (328)
...+++++++|+
T Consensus 175 ~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 175 SWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp STTCCBCCTTCSEEEEEEEEC
T ss_pred ccccCcCCCCCcEEEEEEecC
Confidence 245688888875
No 70
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.81 E-value=6.5e-19 Score=160.88 Aligned_cols=160 Identities=18% Similarity=0.087 Sum_probs=127.3
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecccc
Q 020307 163 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAAL 242 (328)
Q Consensus 163 ~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~vl 242 (328)
.+|||+|||+|.++..+++..|..+++++|+ +.+++.+++++...++ ..++.++.+|+.+ +++ ++||+|++.+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl 243 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA--GERVSLVGGDMLQ-EVP-SNGDIYLLSRII 243 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH--TTSEEEEESCTTT-CCC-SSCSEEEEESCG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC--CCcEEEecCCCCC-CCC-CCCCEEEEchhc
Confidence 8999999999999999999988889999999 9999999998765543 4689999999977 554 579999999999
Q ss_pred ccCCChH--HHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH--hhhccCCCCCHHHHHHHHHHCCCeEEEEEEe-
Q 020307 243 HCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE--RILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ- 317 (328)
Q Consensus 243 ~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~- 317 (328)
||++++. .+|+++.++|||||++++.++..+....+.....+.- ........++.++|+++++++||++++....
T Consensus 244 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 323 (334)
T 2ip2_A 244 GDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLP 323 (334)
T ss_dssp GGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEET
T ss_pred cCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEECC
Confidence 9998876 8999999999999999999876543322221111111 1112345679999999999999999886554
Q ss_pred CcEEEEEEeC
Q 020307 318 QSFIMFAAQK 327 (328)
Q Consensus 318 ~~~~~~~a~k 327 (328)
....++.++|
T Consensus 324 ~~~~~i~~~~ 333 (334)
T 2ip2_A 324 METRMIVAAR 333 (334)
T ss_dssp TTEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 4567788876
No 71
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.81 E-value=4.1e-19 Score=152.83 Aligned_cols=143 Identities=15% Similarity=0.219 Sum_probs=115.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC--CCCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR--LPFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~--lp~~~~~fD~i~ 237 (328)
.++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.++++ ...++.+|+.. .++++++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~----------~~~~~~~d~~~~~~~~~~~~fD~v~ 98 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEK----------LDHVVLGDIETMDMPYEEEQFDCVI 98 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTT----------SSEEEESCTTTCCCCSCTTCEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHh----------CCcEEEcchhhcCCCCCCCccCEEE
Confidence 467899999999999999999884 5999999999999998863 23688899876 667788999999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHh---------hhccCCCCCHHHHHHHHHHCC
Q 020307 238 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER---------ILQNYNYLTEEEIEDLCTSCG 308 (328)
Q Consensus 238 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~ll~~~G 308 (328)
+..+++|++++..+++++.++|||||++++.+++... .......+... ...|..+++.+++.++++++|
T Consensus 99 ~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 176 (230)
T 3cc8_A 99 FGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSH--ISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG 176 (230)
T ss_dssp EESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTS--HHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT
T ss_pred ECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcch--HHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcC
Confidence 9999999999999999999999999999999987532 11111111111 124567899999999999999
Q ss_pred CeEEEEEE
Q 020307 309 LTNYTSKV 316 (328)
Q Consensus 309 f~~v~~~~ 316 (328)
|++++...
T Consensus 177 f~~~~~~~ 184 (230)
T 3cc8_A 177 YSISKVDR 184 (230)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEe
Confidence 99887544
No 72
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.80 E-value=8.1e-20 Score=160.68 Aligned_cols=101 Identities=28% Similarity=0.319 Sum_probs=91.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
.+.+|||||||+|.++..|++.+. +|+|+|+|+.|++.|++ .+++.++++|++++|+++++||+|++..
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~~~~~~~sfD~v~~~~ 107 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR---------HPRVTYAVAPAEDTGLPPASVDVAIAAQ 107 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC---------CTTEEEEECCTTCCCCCSSCEEEEEECS
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh---------cCCceeehhhhhhhcccCCcccEEEEee
Confidence 456999999999999999999876 99999999999988764 6789999999999999999999999999
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEEeccC
Q 020307 241 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 241 vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 273 (328)
++||+ ++.++++++.|+|||||+|++..+...
T Consensus 108 ~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 108 AMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred ehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99776 688999999999999999999887653
No 73
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.80 E-value=7.8e-19 Score=161.37 Aligned_cols=162 Identities=15% Similarity=0.139 Sum_probs=121.4
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
...++.+|||||||+|.++..+++..+..+++++|++ .++. +++....+. ..++.++.+|+. .+++ +||+|+
T Consensus 181 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~--~~~v~~~~~d~~-~~~p--~~D~v~ 252 (348)
T 3lst_A 181 DFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDV--AGRWKVVEGDFL-REVP--HADVHV 252 (348)
T ss_dssp CCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGG--TTSEEEEECCTT-TCCC--CCSEEE
T ss_pred CccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCC--CCCeEEEecCCC-CCCC--CCcEEE
Confidence 3456789999999999999999999888899999994 4444 322222222 467999999996 3444 899999
Q ss_pred eccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHH--HhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 238 AGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLR--ERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 238 ~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
+.+++||++++ ..+|+++.++|||||++++.++.......+.....+. .........++.++|+++++++||++++
T Consensus 253 ~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 253 LKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDR 332 (348)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred EehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEE
Confidence 99999999998 6999999999999999999997665433332111111 1112445578999999999999999998
Q ss_pred EEEeCc-EEEEEEeC
Q 020307 314 SKVQQS-FIMFAAQK 327 (328)
Q Consensus 314 ~~~~~~-~~~~~a~k 327 (328)
...... +.++.++|
T Consensus 333 ~~~~~~~~~vie~~p 347 (348)
T 3lst_A 333 VVGTSSVMSIAVGVP 347 (348)
T ss_dssp EEECSSSCEEEEEEE
T ss_pred EEECCCCcEEEEEEe
Confidence 766433 46666664
No 74
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.80 E-value=6.3e-19 Score=157.91 Aligned_cols=154 Identities=19% Similarity=0.177 Sum_probs=119.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-CCCccceEEe
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-ASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-~~~~fD~i~~ 238 (328)
.++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.|++++...+. ..++.++++|+..+++ .+++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKR--RFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCC--SSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCC--CccEEEEECCccccccCCCCCcCEEEE
Confidence 467899999999999999988875 45899999999999999999877543 3578999999998887 5789999999
Q ss_pred cccccc----CCChHHHHHHHHhcccCCcEEEEEEeccCCCCc----------------------ch-hhHHHH-----H
Q 020307 239 GAALHC----WPSPSNAVAEISRILRSGGVFVGTTFLRYTSST----------------------SL-TGRVLR-----E 286 (328)
Q Consensus 239 ~~vl~h----~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~----------------------~~-~~~~~~-----~ 286 (328)
..+++| ..++..+|+++.++|||||++++.+++...... +. .+..+. .
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 219 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDS 219 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTS
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchh
Confidence 999977 456789999999999999999999987431000 00 000000 0
Q ss_pred hhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 287 RILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 287 ~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
....+..+++.++++++++++||++++...
T Consensus 220 ~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~ 249 (298)
T 1ri5_A 220 VNNCIEYFVDFTRMVDGFKRLGLSLVERKG 249 (298)
T ss_dssp CSSEEEECCCHHHHHHHHHTTTEEEEEEEE
T ss_pred hcCCcccccCHHHHHHHHHHcCCEEEEecC
Confidence 001123578999999999999999988644
No 75
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.80 E-value=1.3e-18 Score=155.38 Aligned_cols=154 Identities=15% Similarity=0.147 Sum_probs=123.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+ . ++.++.+|+..+++ +++||+|
T Consensus 116 ~~~~~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~~-~~~fD~i 188 (286)
T 3m70_A 116 AKIISPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKEN---L-NISTALYDINAANI-QENYDFI 188 (286)
T ss_dssp HHHSCSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---C-CEEEEECCGGGCCC-CSCEEEE
T ss_pred hhccCCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHcC---C-ceEEEEeccccccc-cCCccEE
Confidence 4445788999999999999999999865 99999999999999999988754 2 89999999998876 7899999
Q ss_pred EeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 237 HAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 237 ~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
++..+++|++++ ..+++++.++|||||++++.......... . .......++.+++.++++. |+++..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~--------~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 189 VSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVP-C--------PLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp EECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC-C--------SSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred EEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCC-C--------CCCccccCCHHHHHHHhcC--CEEEEE
Confidence 999999999765 48999999999999998887765432111 0 1134567889999999966 877664
Q ss_pred EE---------------eCcEEEEEEeCC
Q 020307 315 KV---------------QQSFIMFAAQKP 328 (328)
Q Consensus 315 ~~---------------~~~~~~~~a~k~ 328 (328)
.. ...+..++|+||
T Consensus 258 ~~~~~~~~~~~~~g~~~~~~~~~l~arK~ 286 (286)
T 3m70_A 258 NENMGELHKTDENGNRIKMKFATMLARKK 286 (286)
T ss_dssp ECCEEEEEEECSSCCEEEEEEEEEEEECC
T ss_pred EccCCeeeeccCCCCEEEEEEEEEEEecC
Confidence 21 113577889987
No 76
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.80 E-value=2.8e-18 Score=157.90 Aligned_cols=164 Identities=14% Similarity=0.176 Sum_probs=128.5
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
...+..+|||||||+|.++..++++.|..+++..|. +.+++.|++++...+ ..++.++.+|+...|.+ .+|+|+
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~~--~~D~~~ 249 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPLP--EADLYI 249 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC--CCSEEE
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc---cCceeeecCccccCCCC--CceEEE
Confidence 344567999999999999999999999999999997 889999998876543 67899999999876644 579999
Q ss_pred eccccccCCChH--HHHHHHHhcccCCcEEEEEEeccCCC-CcchhhHHHHH--hhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 238 AGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTS-STSLTGRVLRE--RILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 238 ~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
+.++||+++|+. ++|+++++.|+|||+++|.+...+.. ..++....+.- .....-...|.++|+++++++||+.+
T Consensus 250 ~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v 329 (353)
T 4a6d_A 250 LARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDF 329 (353)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEE
T ss_pred eeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceE
Confidence 999999999884 78999999999999999999765432 23332221111 11122345799999999999999999
Q ss_pred EEEEe-CcEEEEEEeC
Q 020307 313 TSKVQ-QSFIMFAAQK 327 (328)
Q Consensus 313 ~~~~~-~~~~~~~a~k 327 (328)
+++.. ..+.+++|+|
T Consensus 330 ~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 330 QFKKTGAIYDAILARK 345 (353)
T ss_dssp EEECCSSSCEEEEEEC
T ss_pred EEEEcCCceEEEEEEe
Confidence 86554 4468889998
No 77
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.79 E-value=1.1e-18 Score=161.84 Aligned_cols=155 Identities=17% Similarity=0.170 Sum_probs=121.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++ .+++.++.+|+.+ +++. ||+|++.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~~--~D~v~~~ 274 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SVPQ--GDAMILK 274 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC--EEEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CCCC--CCEEEEe
Confidence 4568999999999999999999998889999999 888877664 4579999999977 6554 9999999
Q ss_pred cccccCCChH--HHHHHHHhcccCCcEEEEEEeccCCCCc-chh--hHHHHHh---hhccCCCCCHHHHHHHHHHCCCeE
Q 020307 240 AALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSST-SLT--GRVLRER---ILQNYNYLTEEEIEDLCTSCGLTN 311 (328)
Q Consensus 240 ~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~--~~~~~~~---~~~~~~~~~~~~l~~ll~~~Gf~~ 311 (328)
+++||++++. .+|+++.++|||||++++.++..+.... +.. ....... ...+...++.++|+++++++||++
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 354 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSK 354 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCce
Confidence 9999999998 9999999999999999999876543221 110 0111111 012345679999999999999999
Q ss_pred EEEEE-eCc-EEEEEEeC
Q 020307 312 YTSKV-QQS-FIMFAAQK 327 (328)
Q Consensus 312 v~~~~-~~~-~~~~~a~k 327 (328)
++... ... +.++.++|
T Consensus 355 ~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 355 FQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp EEEEEEETTTEEEEEEEC
T ss_pred EEEEEcCCCCeEEEEEeC
Confidence 88765 444 77777765
No 78
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.79 E-value=2.4e-18 Score=150.62 Aligned_cols=161 Identities=20% Similarity=0.298 Sum_probs=119.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++....+ .++.++++|+.+++++ ++||+|++.
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~-~~fD~v~~~ 112 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEIAFK-NEFDAVTMF 112 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGCCCC-SCEEEEEEC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhcccC-CCccEEEEc
Confidence 4578999999999999999999865 99999999999999999887653 3799999999888764 689999987
Q ss_pred c-ccccCC--ChHHHHHHHHhcccCCcEEEEEEeccCCC--Cc----------------ch--hhH------------HH
Q 020307 240 A-ALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTS--ST----------------SL--TGR------------VL 284 (328)
Q Consensus 240 ~-vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~--~~----------------~~--~~~------------~~ 284 (328)
. +++|++ ++..+++++.++|||||++++..++.... .. .+ ... ..
T Consensus 113 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (252)
T 1wzn_A 113 FSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPCWFYGGRDGPVVWNEQKGEEKLVIMDWREVEPAVQKLRFKRLVQIL 192 (252)
T ss_dssp SSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC-------CCEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred CCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccchhcccCCCCeeeeccCCCeeEEEEeecccccccceeeheeeeeec
Confidence 4 455554 45689999999999999999877652100 00 00 000 00
Q ss_pred HHh-------hhccCCCCCHHHHHHHHHHCCCeEEEEEEe--------CcEEEEEEeCC
Q 020307 285 RER-------ILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ--------QSFIMFAAQKP 328 (328)
Q Consensus 285 ~~~-------~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~--------~~~~~~~a~k~ 328 (328)
... ...+.++++.++++ +++++||++++.... ..-++++|+|+
T Consensus 193 ~~~g~~~~~~~~~~~~~~~~~e~~-~l~~aGF~~~~~~~~~~~~~~~~~~r~~~va~k~ 250 (252)
T 1wzn_A 193 RPNGEVKAFLVDDELNIYTPREVR-LLAEKYFEKVKIYGNLKRELSPNDMRYWIVGIAK 250 (252)
T ss_dssp CTTSCEEEEEEEEEEECCCHHHHH-HHHTTTSSEEEEEETTBSSCCTTCCEEEEEEECC
T ss_pred ccCCceeEEEEeeeeeeecHHHHH-HHHHhcCceeeeecccccccCCCCceEEEEEEee
Confidence 000 01345789999997 899999999886442 23478888875
No 79
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.9e-18 Score=155.42 Aligned_cols=147 Identities=16% Similarity=0.201 Sum_probs=114.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhc-CcCCCCCeEEEEecCCCCCCCC------C
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADVCRLPFAS------G 231 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~~~lp~~~------~ 231 (328)
.++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|++++... +. ..++.++++|+.++++.+ +
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT--YKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C--CTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC--CCceEEEEcCHHhCCccccccccCC
Confidence 468899999999999999999764 6779999999999999999998774 22 568999999999988877 8
Q ss_pred ccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCC-CCcchhhHHHHHhhh---ccCCC---CCHHHHHHHH
Q 020307 232 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT-SSTSLTGRVLRERIL---QNYNY---LTEEEIEDLC 304 (328)
Q Consensus 232 ~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~~~~~~~~~~~---~~~~~---~~~~~l~~ll 304 (328)
+||+|++..+++|+ ++..+++++.++|||||++++.++.... ...+.....+..... ....+ ...+.+.+++
T Consensus 113 ~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l 191 (299)
T 3g5t_A 113 KIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNML 191 (299)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTT
T ss_pred CeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhh
Confidence 99999999999999 9999999999999999999995544321 111121222222111 11122 3466789999
Q ss_pred HHCCC
Q 020307 305 TSCGL 309 (328)
Q Consensus 305 ~~~Gf 309 (328)
++.||
T Consensus 192 ~~~gf 196 (299)
T 3g5t_A 192 KDSHL 196 (299)
T ss_dssp TTCCC
T ss_pred hccCC
Confidence 99999
No 80
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.79 E-value=1.1e-19 Score=154.60 Aligned_cols=149 Identities=17% Similarity=0.256 Sum_probs=115.5
Q ss_pred cCCCeEEEEcCCcCHH-HHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 160 AQGGLLVDVSCGSGLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~-~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
.++.+|||+|||+|.+ ...++..+ .+++|+|+|+.+++.+++++... ..++.++.+|+.++++++++||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSREN----NFKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHH----TCCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhc----CCceEEEECchhhCCCCCCceeEEEE
Confidence 4578999999999997 45555544 49999999999999999987764 34788999999999988899999999
Q ss_pred ccccccC--CChHHHHHHHHhcccCCcEEEEEEeccCCCCcch---hhHH----HHHhhhccCCCCCHHHHHHHHHHCCC
Q 020307 239 GAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL---TGRV----LRERILQNYNYLTEEEIEDLCTSCGL 309 (328)
Q Consensus 239 ~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~l~~ll~~~Gf 309 (328)
..+++|+ .++..+++++.++|||||++++.++......... .... .....+....+|+.+++.++++.+||
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEE
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCc
Confidence 9999999 5778999999999999999999998754211100 0000 00011122368899999999999999
Q ss_pred eEEEE
Q 020307 310 TNYTS 314 (328)
Q Consensus 310 ~~v~~ 314 (328)
...+.
T Consensus 176 ~~~~~ 180 (209)
T 2p8j_A 176 LFKED 180 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 76653
No 81
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.79 E-value=2e-19 Score=161.41 Aligned_cols=152 Identities=18% Similarity=0.184 Sum_probs=111.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC-----------------------------
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI----------------------------- 211 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~----------------------------- 211 (328)
++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 678999999999999999999976679999999999999999876543210
Q ss_pred --------------------------CCCCeEEEEecCCCCC-----CCCCccceEEeccccccCC------ChHHHHHH
Q 020307 212 --------------------------LTSNLALVRADVCRLP-----FASGFVDAVHAGAALHCWP------SPSNAVAE 254 (328)
Q Consensus 212 --------------------------~~~~i~~~~~d~~~lp-----~~~~~fD~i~~~~vl~h~~------d~~~~l~~ 254 (328)
...++.|+++|+...+ +.+++||+|++..+++|+. ++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0148999999997644 5678999999999998875 67789999
Q ss_pred HHhcccCCcEEEEEEeccCCC-CcchhhHHHHHhhhccCCCCCHHHHHHHHHH--CCCeEEEE
Q 020307 255 ISRILRSGGVFVGTTFLRYTS-STSLTGRVLRERILQNYNYLTEEEIEDLCTS--CGLTNYTS 314 (328)
Q Consensus 255 ~~r~LkpgG~l~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--~Gf~~v~~ 314 (328)
+.++|||||+|++........ ........+.... +...+.++++.++|.+ +||+.++.
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~--~~~~~~p~~~~~~L~~~~~GF~~~~~ 266 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNY--YRIQLKPEQFSSYLTSPDVGFSSYEL 266 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHH--HHCCCCGGGHHHHHTSTTTCCCEEEE
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhh--hcEEEcHHHHHHHHHhcCCCceEEEE
Confidence 999999999999975432100 0000111111111 1224558999999999 99987764
No 82
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.79 E-value=1.1e-18 Score=147.71 Aligned_cols=139 Identities=14% Similarity=0.125 Sum_probs=113.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++ +|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++.+|+..+++++++||+|++.
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDIVADAWEGIVSI 101 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSCCTTTCSEEEEE
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCCCcCCccEEEEE
Confidence 345 999999999999999999865 99999999999999999887653 37999999999988888899999995
Q ss_pred cccccC--CChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 240 AALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 240 ~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
. .|+ .++..+++++.++|||||++++.++........ ......+..+++.+++.++++ ||++++..
T Consensus 102 ~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 102 F--CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYN------TGGPKDLDLLPKLETLQSELP--SLNWLIAN 169 (202)
T ss_dssp C--CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGT------SCCSSSGGGCCCHHHHHHHCS--SSCEEEEE
T ss_pred h--hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCC------CCCCCcceeecCHHHHHHHhc--CceEEEEE
Confidence 4 455 356789999999999999999999876432100 011124467899999999999 99988753
No 83
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.79 E-value=5.2e-18 Score=157.03 Aligned_cols=156 Identities=15% Similarity=0.202 Sum_probs=120.9
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..+..+|||||||+|.++..+++..|..+++++|+ +.+++.+++ ..++.++.+|+.+ |++++ |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p~~--D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GVPKG--DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CCCCC--CEEEE
Confidence 34568999999999999999999998889999999 888877654 5689999999976 66654 99999
Q ss_pred ccccccCCChH--HHHHHHHhcccCCcEEEEEEeccCCCCc-chhhH--HHHH----hhhccCCCCCHHHHHHHHHHCCC
Q 020307 239 GAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSST-SLTGR--VLRE----RILQNYNYLTEEEIEDLCTSCGL 309 (328)
Q Consensus 239 ~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~--~~~~----~~~~~~~~~~~~~l~~ll~~~Gf 309 (328)
.+++||++++. .+|++++++|||||++++.+...+.... +.... .... ........++.++|+++++++||
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF 347 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGF 347 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTC
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCC
Confidence 99999998775 7899999999999999999976543221 11010 0111 11124567899999999999999
Q ss_pred eEEEEEE-eCcEEEEEEeC
Q 020307 310 TNYTSKV-QQSFIMFAAQK 327 (328)
Q Consensus 310 ~~v~~~~-~~~~~~~~a~k 327 (328)
+.++... ...+.++.+.|
T Consensus 348 ~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 348 RGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp CEEEEEEEETTEEEEEEEC
T ss_pred eeeEEEEeCCCcEEEEEEe
Confidence 9988654 45566666665
No 84
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.78 E-value=4.5e-19 Score=158.71 Aligned_cols=147 Identities=19% Similarity=0.217 Sum_probs=106.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC-------------CC--------------
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI-------------LT-------------- 213 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~-------------~~-------------- 213 (328)
++.+|||||||+|.+...++.. ...+|+|+|+|+.+++.|++++...... ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 6789999999999955444433 2349999999999999998865421000 00
Q ss_pred CCeEEEEecCCC-CCC-----CCCccceEEecccccc----CCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHH
Q 020307 214 SNLALVRADVCR-LPF-----ASGFVDAVHAGAALHC----WPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRV 283 (328)
Q Consensus 214 ~~i~~~~~d~~~-lp~-----~~~~fD~i~~~~vl~h----~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~ 283 (328)
..+.++.+|+.. +|+ ++++||+|+++.+++| ++++..+|+++.++|||||+|++.......... .
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~-~---- 224 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYL-A---- 224 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEE-E----
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEE-c----
Confidence 015677789877 664 3467999999999999 667889999999999999999998644321100 0
Q ss_pred HHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 284 LRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
.....+..+++.+++.++|+++||++++..
T Consensus 225 --~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 225 --GEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp --TTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred --CCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 011123567899999999999999988754
No 85
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.78 E-value=7.5e-18 Score=155.70 Aligned_cols=156 Identities=18% Similarity=0.164 Sum_probs=121.2
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..+..+|||||||+|.++..+++..|..+++++|+ +.+++.+++ ..++.++.+|+.+ |++++ |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p~~--D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVPSG--DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCCCC--CEEEe
Confidence 34568999999999999999999998889999999 888876654 5689999999987 76654 99999
Q ss_pred ccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCc-chhhH--HHHH---h-hhccCCCCCHHHHHHHHHHCCC
Q 020307 239 GAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSST-SLTGR--VLRE---R-ILQNYNYLTEEEIEDLCTSCGL 309 (328)
Q Consensus 239 ~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-~~~~~--~~~~---~-~~~~~~~~~~~~l~~ll~~~Gf 309 (328)
.+++||++++ ..+|++++++|||||++++.+...+.... ..... .... . .......++.++|+++++++||
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF 345 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGF 345 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTC
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCC
Confidence 9999999876 48899999999999999999877543211 11110 1111 1 1234457899999999999999
Q ss_pred eEEEEEE-eCcEEEEEEeC
Q 020307 310 TNYTSKV-QQSFIMFAAQK 327 (328)
Q Consensus 310 ~~v~~~~-~~~~~~~~a~k 327 (328)
+.++... ...+.++.+.|
T Consensus 346 ~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 346 TGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp CEEEEEEEETTEEEEEEEC
T ss_pred ceEEEEEcCCceEEEEEeC
Confidence 9988654 45566777665
No 86
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=3.6e-18 Score=148.95 Aligned_cols=143 Identities=15% Similarity=0.078 Sum_probs=113.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC-----Cccc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-----GFVD 234 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-----~~fD 234 (328)
.++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.++++.. ..++.++++|+.+++... ..||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCcc
Confidence 5678999999999999999999987 99999999999999998762 458999999998865432 2499
Q ss_pred eEEeccccccCC--ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHH----------H--hhhccCCCCCHHHH
Q 020307 235 AVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLR----------E--RILQNYNYLTEEEI 300 (328)
Q Consensus 235 ~i~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~l 300 (328)
+|++..+++|++ ++..+++++.++|||||++++.++.... ..++..... . ........++.+++
T Consensus 127 ~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC--IDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDI 204 (245)
T ss_dssp EEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH--HHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHH
T ss_pred EEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc--cHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHH
Confidence 999999999998 7889999999999999999999886541 111111000 0 01122346899999
Q ss_pred HHHHHHCCCeEEEE
Q 020307 301 EDLCTSCGLTNYTS 314 (328)
Q Consensus 301 ~~ll~~~Gf~~v~~ 314 (328)
.+++ +||+++..
T Consensus 205 ~~~~--aGf~~~~~ 216 (245)
T 3ggd_A 205 ELYF--PDFEILSQ 216 (245)
T ss_dssp HHHC--TTEEEEEE
T ss_pred HHHh--CCCEEEec
Confidence 9999 99998874
No 87
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.77 E-value=3.6e-17 Score=138.66 Aligned_cols=126 Identities=19% Similarity=0.113 Sum_probs=107.2
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.|++++...+ ..++.++.+|+.+.....++||+|
T Consensus 36 l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~D~i 112 (204)
T 3e05_A 36 LRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV---ARNVTLVEAFAPEGLDDLPDPDRV 112 (204)
T ss_dssp TTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT---CTTEEEEECCTTTTCTTSCCCSEE
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC---CCcEEEEeCChhhhhhcCCCCCEE
Confidence 45567889999999999999999999877899999999999999999988765 468999999996554344789999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCe
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLT 310 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~ 310 (328)
++..+++ ++..+++++.++|||||++++.++... +.+++.++++++||.
T Consensus 113 ~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------------~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 113 FIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD----------------------TLTKAVEFLEDHGYM 161 (204)
T ss_dssp EESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH----------------------HHHHHHHHHHHTTCE
T ss_pred EECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc----------------------cHHHHHHHHHHCCCc
Confidence 9988775 788999999999999999999875321 346788999999983
No 88
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.77 E-value=7.6e-18 Score=149.59 Aligned_cols=145 Identities=19% Similarity=0.120 Sum_probs=113.4
Q ss_pred CCCeEEEEcCCc---CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----------
Q 020307 161 QGGLLVDVSCGS---GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------- 227 (328)
Q Consensus 161 ~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------- 227 (328)
...+|||||||+ |.++..+.+..+..+|+++|+|+.|++.|++++.. ..++.++.+|+.+.+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCchhhhccchhhc
Confidence 457999999999 99888888877778999999999999999998754 468999999997531
Q ss_pred -CCCCccceEEeccccccCCC--hHHHHHHHHhcccCCcEEEEEEeccCCCC-cchhhHHHHHhhhccCCCCCHHHHHHH
Q 020307 228 -FASGFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTSS-TSLTGRVLRERILQNYNYLTEEEIEDL 303 (328)
Q Consensus 228 -~~~~~fD~i~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l 303 (328)
++..+||+|++..+|||+++ +..+|+++.++|||||+|++.+....... .......+.. ......+++.+++.++
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~ei~~~ 230 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRE-NLGEGWARTPEEIERQ 230 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHH-HHSCCCCBCHHHHHHT
T ss_pred cCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHh-cCCCCccCCHHHHHHH
Confidence 22358999999999999987 78999999999999999999998753200 0001111221 1234567899999999
Q ss_pred HHHCCCeEEE
Q 020307 304 CTSCGLTNYT 313 (328)
Q Consensus 304 l~~~Gf~~v~ 313 (328)
| .||++++
T Consensus 231 l--~G~~l~~ 238 (274)
T 2qe6_A 231 F--GDFELVE 238 (274)
T ss_dssp T--TTCEECT
T ss_pred h--CCCeEcc
Confidence 9 5998765
No 89
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.77 E-value=6.2e-18 Score=143.48 Aligned_cols=138 Identities=16% Similarity=0.155 Sum_probs=116.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.|++++...+ ..++.++.+|+.+.+ +++||+|++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~--~~~fD~i~~~ 132 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALNG---IYDIALQKTSLLADV--DGKFDLIVAN 132 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT---CCCCEEEESSTTTTC--CSCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEeccccccC--CCCceEEEEC
Confidence 467899999999999999998864 4689999999999999999988765 335999999997653 5799999999
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEeCc
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQS 319 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~~ 319 (328)
.++++ ...+++++.++|||||++++.++... +.+++.++++++||++++....+.
T Consensus 133 ~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~~~~~Gf~~~~~~~~~~ 187 (205)
T 3grz_A 133 ILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL----------------------QLPKIEQALAENSFQIDLKMRAGR 187 (205)
T ss_dssp SCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG----------------------GHHHHHHHHHHTTEEEEEEEEETT
T ss_pred CcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc----------------------cHHHHHHHHHHcCCceEEeeccCC
Confidence 88876 47889999999999999999875432 357899999999999999888898
Q ss_pred EEEEEEeCC
Q 020307 320 FIMFAAQKP 328 (328)
Q Consensus 320 ~~~~~a~k~ 328 (328)
|..++.++|
T Consensus 188 w~~~~~~~~ 196 (205)
T 3grz_A 188 WIGLAISRK 196 (205)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 877666543
No 90
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.77 E-value=2.2e-17 Score=142.86 Aligned_cols=148 Identities=14% Similarity=0.160 Sum_probs=112.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC----CCCCCCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR----LPFASGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~----lp~~~~~ 232 (328)
+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+++++.. ..++.++.+|+.. +++. ++
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-----~~~v~~~~~d~~~~~~~~~~~-~~ 143 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-----RENIIPILGDANKPQEYANIV-EK 143 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT-----CTTEEEEECCTTCGGGGTTTS-CC
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc-----CCCeEEEECCCCCcccccccC-cc
Confidence 334577899999999999999999985456999999999999999988655 4689999999987 6765 78
Q ss_pred cceEEeccccccCCCh---HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCC
Q 020307 233 VDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 309 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~---~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf 309 (328)
||+|+ ++++++ ..+++++.++|||||++++..........+... .+..+++. +++++||
T Consensus 144 ~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~------------~~~~~~l~-~l~~~Gf 205 (230)
T 1fbn_A 144 VDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPK------------EIFKEQKE-ILEAGGF 205 (230)
T ss_dssp EEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHH------------HHHHHHHH-HHHHHTE
T ss_pred EEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHH------------HhhHHHHH-HHHHCCC
Confidence 99998 566777 778999999999999999973211111111100 11236787 8999999
Q ss_pred eEEEEEEeCc----EEEEEEeCC
Q 020307 310 TNYTSKVQQS----FIMFAAQKP 328 (328)
Q Consensus 310 ~~v~~~~~~~----~~~~~a~k~ 328 (328)
++++.....+ .++++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~v~~~k~ 228 (230)
T 1fbn_A 206 KIVDEVDIEPFEKDHVMFVGIWE 228 (230)
T ss_dssp EEEEEEECTTTSTTEEEEEEEEC
T ss_pred EEEEEEccCCCccceEEEEEEeC
Confidence 9888766544 467777653
No 91
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=1.8e-18 Score=147.80 Aligned_cols=108 Identities=16% Similarity=0.278 Sum_probs=96.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++... ..++.++++|+.+++ ++++||+|
T Consensus 47 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~-~~~~fD~v 118 (216)
T 3ofk_A 47 LSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKR-----WSHISWAATDILQFS-TAELFDLI 118 (216)
T ss_dssp TTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTT-----CSSEEEEECCTTTCC-CSCCEEEE
T ss_pred cccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhccc-----CCCeEEEEcchhhCC-CCCCccEE
Confidence 4445678999999999999999999875 999999999999999998765 458999999999888 67899999
Q ss_pred EeccccccCCCh---HHHHHHHHhcccCCcEEEEEEecc
Q 020307 237 HAGAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 237 ~~~~vl~h~~d~---~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++..+++|++++ ..+++++.++|||||++++.++..
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999999999998 467999999999999999988753
No 92
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.76 E-value=6e-18 Score=155.68 Aligned_cols=155 Identities=16% Similarity=0.173 Sum_probs=119.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.+..+|||||||+|.++..+++..|..+++++|+ +.+++.+++ ..++.++.+|+.+ +++ .||+|++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p--~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFT-SIP--NADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTT-CCC--CCSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccC-CCC--CccEEEee
Confidence 4568999999999999999999988889999999 999887764 3469999999966 554 39999999
Q ss_pred cccccCCChH--HHHHHHHhcccC---CcEEEEEEeccCCCCcc---hhhHHHHHhh--hccCCCCCHHHHHHHHHHCCC
Q 020307 240 AALHCWPSPS--NAVAEISRILRS---GGVFVGTTFLRYTSSTS---LTGRVLRERI--LQNYNYLTEEEIEDLCTSCGL 309 (328)
Q Consensus 240 ~vl~h~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~l~~ll~~~Gf 309 (328)
+++||++++. .+|+++.++||| ||++++.++........ .....+.... ......++.++|+++++++||
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGF 333 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTC
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCC
Confidence 9999999988 999999999999 99999998765432211 0011111110 011445789999999999999
Q ss_pred eEEEEEEe-CcEEEEEEeC
Q 020307 310 TNYTSKVQ-QSFIMFAAQK 327 (328)
Q Consensus 310 ~~v~~~~~-~~~~~~~a~k 327 (328)
++++.... +...++.++|
T Consensus 334 ~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 334 QHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp CEEEEEEEETTEEEEEEEC
T ss_pred CeeEEEecCCCcEEEEEeC
Confidence 98886553 4446676654
No 93
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.75 E-value=1.7e-18 Score=155.80 Aligned_cols=155 Identities=13% Similarity=0.114 Sum_probs=109.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCC---CCCeEEEEecC------CCC--CCC
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL---TSNLALVRADV------CRL--PFA 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~---~~~i~~~~~d~------~~l--p~~ 229 (328)
++.+|||||||+|..+..++..+ ..+|+|+|+|+.+++.|+++....+... ..++.+.+.|+ .++ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 57899999999998766666554 3489999999999999999886543100 01367888887 322 245
Q ss_pred CCccceEEeccccccC---CChHHHHHHHHhcccCCcEEEEEEeccCCCCcch------------hhH-----------H
Q 020307 230 SGFVDAVHAGAALHCW---PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSL------------TGR-----------V 283 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~------------~~~-----------~ 283 (328)
+++||+|+|..++||+ .+...+|+++.++|||||++++.+++.......+ ... .
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 7899999999999876 3557899999999999999999998754110000 000 0
Q ss_pred ---HHHhh---hccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 284 ---LRERI---LQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 284 ---~~~~~---~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
+.... .....+.+.+++.++++++||+++....
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 00000 0012367789999999999999988644
No 94
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.75 E-value=3.2e-18 Score=146.70 Aligned_cols=148 Identities=20% Similarity=0.214 Sum_probs=107.5
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH----hcCcCCCCCeEEEEecCCCCCCCCCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIK----QDNTILTSNLALVRADVCRLPFASGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~~~~~~~i~~~~~d~~~lp~~~~~ 232 (328)
+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.+.++.. ..+ .+++.++++|+.++|+.+++
T Consensus 23 l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~~~ 99 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG---LPNLLYLWATAERLPPLSGV 99 (218)
T ss_dssp HHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC---CTTEEEEECCSTTCCSCCCE
T ss_pred hhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC---CCceEEEecchhhCCCCCCC
Confidence 44567889999999999999999999877899999999998886443332 222 45899999999999987666
Q ss_pred cceEEe---cccc--ccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCC----HHHHHHH
Q 020307 233 VDAVHA---GAAL--HCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLT----EEEIEDL 303 (328)
Q Consensus 233 fD~i~~---~~vl--~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l 303 (328)
|.|.. ...+ +|++++..+++++.++|||||++++....... .+... .+ .....++ .+++..+
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~-~~-----~~~~~~~~~~~~~~l~~~ 170 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAW--RPSVP-EV-----GEHPEPTPDSADEWLAPR 170 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGB--TTBCG-GG-----TTCCCCCHHHHHHHHHHH
T ss_pred -CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccc--ccccc-cc-----ccCCccchHHHHHHHHHH
Confidence 66663 2333 38899999999999999999999996543221 00000 00 1112222 3458889
Q ss_pred HHHCCCeEEEEEE
Q 020307 304 CTSCGLTNYTSKV 316 (328)
Q Consensus 304 l~~~Gf~~v~~~~ 316 (328)
++++||++.+...
T Consensus 171 l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 171 YAEAGWKLADCRY 183 (218)
T ss_dssp HHHTTEEEEEEEE
T ss_pred HHHcCCCceeeec
Confidence 9999999887543
No 95
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.74 E-value=2.7e-17 Score=161.58 Aligned_cols=155 Identities=13% Similarity=0.106 Sum_probs=120.5
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCc---CCCCCeEEEEecCCCCCCCCCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNT---ILTSNLALVRADVCRLPFASGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~---~~~~~i~~~~~d~~~lp~~~~~ 232 (328)
+...++.+|||||||+|.++..+++.+ +..+|+|+|+|+.+++.|++++..... ....++.++++|+.++++.+++
T Consensus 717 L~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~s 796 (950)
T 3htx_A 717 IRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHD 796 (950)
T ss_dssp HHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCS
T ss_pred hcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCC
Confidence 444578899999999999999999987 446999999999999999987653210 0145899999999999998899
Q ss_pred cceEEeccccccCCChH--HHHHHHHhcccCCcEEEEEEeccCCCCcchhhHH-------HH-------HhhhccCCCCC
Q 020307 233 VDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRV-------LR-------ERILQNYNYLT 296 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-------~~-------~~~~~~~~~~~ 296 (328)
||+|++..+++|++++. .+++++.++|||| .+++.+++... ...+... .. -....|...++
T Consensus 797 FDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ey--N~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWT 873 (950)
T 3htx_A 797 VDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEF--NTILQRSTPETQEENNSEPQLPKFRNHDHKFEWT 873 (950)
T ss_dssp CCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGG--HHHHTCC------------CCSSCSCSSCSCCBC
T ss_pred eeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchh--hhhhhhcccccccccccccccccccccCcceeec
Confidence 99999999999999876 5899999999999 99999887631 1110000 00 01235666788
Q ss_pred HHHHHH----HHHHCCCeEEEE
Q 020307 297 EEEIED----LCTSCGLTNYTS 314 (328)
Q Consensus 297 ~~~l~~----ll~~~Gf~~v~~ 314 (328)
.++++. +.++.||.+.-.
T Consensus 874 ReEFr~Wae~LAer~GYsVefv 895 (950)
T 3htx_A 874 REQFNQWASKLGKRHNYSVEFS 895 (950)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHhcCcEEEEE
Confidence 888887 778889976554
No 96
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.74 E-value=4.7e-18 Score=149.71 Aligned_cols=142 Identities=25% Similarity=0.320 Sum_probs=109.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++.. . .++.+|+..+++++++||+|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCCCCCEEEEEEcc
Confidence 678999999999999999999865 99999999999999998632 2 288999999998889999999998
Q ss_pred ccccC-CChHHHHHHHHhcccCCcEEEEEEeccCCCCcc------h--hhHHHHHhhhc--------cCCCCCHHHHHHH
Q 020307 241 ALHCW-PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTS------L--TGRVLRERILQ--------NYNYLTEEEIEDL 303 (328)
Q Consensus 241 vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~------~--~~~~~~~~~~~--------~~~~~~~~~l~~l 303 (328)
+++|+ +++..+|+++.++|||||++++.+++....... + ....+...... ...+++.+++.++
T Consensus 123 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 202 (260)
T 2avn_A 123 DVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL 202 (260)
T ss_dssp SHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC
T ss_pred hhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHHh
Confidence 77776 789999999999999999999999875311100 0 00001110000 1137899999888
Q ss_pred HHHCCCeEEEEEE
Q 020307 304 CTSCGLTNYTSKV 316 (328)
Q Consensus 304 l~~~Gf~~v~~~~ 316 (328)
+||++++...
T Consensus 203 ---aGf~~~~~~~ 212 (260)
T 2avn_A 203 ---EGFETVDIRG 212 (260)
T ss_dssp ---TTEEEEEEEE
T ss_pred ---cCceEEEEEC
Confidence 9999887543
No 97
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.74 E-value=2.9e-17 Score=141.33 Aligned_cols=150 Identities=14% Similarity=0.119 Sum_probs=113.6
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC---CCCCCCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---lp~~~~~ 232 (328)
+...||.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.+++++.. ..++..+.+|... .++..++
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-----~~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-----RRNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-----CTTEEEEESCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-----hcCeeEEEEeccCccccccccce
Confidence 56789999999999999999999987 7888999999999999999988765 5689999998854 3456788
Q ss_pred cceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 233 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
+|+|++. +.|..++..+++++.+.|||||+++++...... . ...+ ... ..++..+.|+++||+++
T Consensus 148 vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~-------d---~~~p-~~~--~~~~ev~~L~~~GF~l~ 212 (233)
T 4df3_A 148 VDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI-------D---VTTE-PSE--VYKREIKTLMDGGLEIK 212 (233)
T ss_dssp EEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH-------H---HHTC-CCH--HHHHHHHHHHHTTCCEE
T ss_pred EEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccC-------C---CCCC-hHH--HHHHHHHHHHHCCCEEE
Confidence 9998863 455567789999999999999999987643210 0 0000 000 01234567899999999
Q ss_pred EEEEeCc----EEEEEEe
Q 020307 313 TSKVQQS----FIMFAAQ 326 (328)
Q Consensus 313 ~~~~~~~----~~~~~a~ 326 (328)
+.....+ .+++.++
T Consensus 213 e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 213 DVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp EEEECTTTSTTEEEEEEC
T ss_pred EEEccCCCCCceEEEEEE
Confidence 8776555 3666654
No 98
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.74 E-value=2.1e-17 Score=152.35 Aligned_cols=154 Identities=16% Similarity=0.135 Sum_probs=119.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++ ..++.++.+|+.. +++ .||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~--~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SIP--SADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CCC--CCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CCC--CceEEEEc
Confidence 3567999999999999999999988889999999 788876653 3569999999977 655 49999999
Q ss_pred cccccCCChH--HHHHHHHhcccC---CcEEEEEEeccCCCCcc----hhhHHHHH---hhhccCCCCCHHHHHHHHHHC
Q 020307 240 AALHCWPSPS--NAVAEISRILRS---GGVFVGTTFLRYTSSTS----LTGRVLRE---RILQNYNYLTEEEIEDLCTSC 307 (328)
Q Consensus 240 ~vl~h~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~l~~ll~~~ 307 (328)
+++||++|+. .+|+++.++||| ||++++.++........ . ...+.. ........++.++|+++++++
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~-~~~~~d~~~~~~~~g~~~t~~e~~~ll~~a 337 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTE-LQLDYDLVMLTMFLGKERTKQEWEKLIYDA 337 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHH-HHHHHHHHHHHHHSCCCEEHHHHHHHHHHT
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhh-HHHhhCHHHhccCCCCCCCHHHHHHHHHHc
Confidence 9999999987 999999999999 99999988765432211 1 111111 111234567999999999999
Q ss_pred CCeEEEEEEeCc-EEEEEEeC
Q 020307 308 GLTNYTSKVQQS-FIMFAAQK 327 (328)
Q Consensus 308 Gf~~v~~~~~~~-~~~~~a~k 327 (328)
||++++...... ..++.++|
T Consensus 338 Gf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 338 GFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp TCCEEEEEEETTTEEEEEEEC
T ss_pred CCCeeEEEecCCCcEEEEEeC
Confidence 999988765444 46666654
No 99
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.73 E-value=1.6e-16 Score=134.91 Aligned_cols=127 Identities=17% Similarity=0.177 Sum_probs=104.1
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++++..++ ..++.++.+|+.+.......||+|
T Consensus 51 l~~~~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 51 LAPRRGELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp HCCCTTCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTGGGTTSCCCSEE
T ss_pred cCCCCCCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhhhcccCCCCCEE
Confidence 455678899999999999999999984 4999999999999999999887763 338999999998733234579999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
++..++ ++. +++++.++|||||++++...... +..++.+++++.|+++...
T Consensus 127 ~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~----------------------~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 127 FIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE----------------------SETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp EECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH----------------------HHHHHHHHHHHHCSEEEEE
T ss_pred EECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc----------------------cHHHHHHHHHhCCCcEEEE
Confidence 987754 566 99999999999999999875421 2457788899999987764
No 100
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.73 E-value=5.8e-17 Score=133.97 Aligned_cols=129 Identities=18% Similarity=0.178 Sum_probs=104.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~~~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.+++++...+. ..++ ++.+|... ++...++||+
T Consensus 21 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~-~~~~d~~~~~~~~~~~~D~ 97 (178)
T 3hm2_A 21 LAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV--SDRI-AVQQGAPRAFDDVPDNPDV 97 (178)
T ss_dssp HCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC--TTSE-EEECCTTGGGGGCCSCCSE
T ss_pred hcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC--CCCE-EEecchHhhhhccCCCCCE
Confidence 445677899999999999999999987677999999999999999999887663 3378 88888743 3433378999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
|++..+++| ..+++++.++|||||++++.+.... +...+.+++++.|++....
T Consensus 98 i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 98 IFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE----------------------SEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp EEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH----------------------HHHHHHHHHHHHCCEEEEE
T ss_pred EEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc----------------------cHHHHHHHHHHcCCeeEEE
Confidence 999999887 6789999999999999999875421 2346778888899876653
No 101
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=6.5e-19 Score=153.16 Aligned_cols=141 Identities=13% Similarity=0.240 Sum_probs=103.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC--CCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~i~ 237 (328)
.++.+|||||||+|..+..+++..+ .+++|+|+|+.+++.|+++.... ..++.++.+|+..+ ++++++||.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~----~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC----CCceEEEeehHHhhcccccccCCceEE
Confidence 5688999999999999999988764 48999999999999999988765 45788888887543 46788999987
Q ss_pred e-----ccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 238 A-----GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 238 ~-----~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
+ ..+++|++++..+++++.|+|||||+|++.+.... ....... .........+.+...|.++||+++
T Consensus 134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~L~eaGF~~~ 205 (236)
T 3orh_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSW-------GELMKSK-YSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHH-------HHHTTTT-CSCHHHHHHHHTHHHHHHHTCCGG
T ss_pred EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCc-------hhhhhhh-hhhhhhhhHHHHHHHHHHcCCeEE
Confidence 4 56678889999999999999999999987542211 0000000 000011123456677889999754
Q ss_pred E
Q 020307 313 T 313 (328)
Q Consensus 313 ~ 313 (328)
.
T Consensus 206 ~ 206 (236)
T 3orh_A 206 N 206 (236)
T ss_dssp G
T ss_pred E
Confidence 3
No 102
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.73 E-value=3.8e-17 Score=142.24 Aligned_cols=129 Identities=15% Similarity=0.025 Sum_probs=105.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC---CCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---SGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~---~~~fD~i 236 (328)
.++.+|||+|||+|.++..++...+..+|+|+|+|+.+++.+++++...+ ..++.++++|+.++++. +++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ---LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEeccHHHhcccccccCCccEE
Confidence 46789999999999999999977667799999999999999999988766 44799999999877653 5789999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
++.. +.++..+++++.++|||||++++...... .. ..+++.+.++.+||++++..
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~-------~~-------------~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALKAASA-------EE-------------ELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-C-------HH-------------HHHHHHHHHHHTTEEEEEEE
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc-------hH-------------HHHHHHHHHHHcCCeEeEEE
Confidence 9976 46789999999999999999988642110 11 12467788999999887753
No 103
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.73 E-value=2.1e-17 Score=136.85 Aligned_cols=117 Identities=18% Similarity=0.185 Sum_probs=97.7
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC---CCCcc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFV 233 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~---~~~~f 233 (328)
+...++.+|||+|||. +++|+|+.|++.|+++.. .++.+.++|+.++++ ++++|
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred cCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCE
Confidence 4566889999999985 239999999999998753 258999999999887 78899
Q ss_pred ceEEeccccccC-CChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCC
Q 020307 234 DAVHAGAALHCW-PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 309 (328)
Q Consensus 234 D~i~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf 309 (328)
|+|++..+++|+ +++..++++++|+|||||++++..+...... ......+.+++.++++++||
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD-------------NNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC-------------SSSSSCCHHHHHHHHHHTTC
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc-------------cccccCCHHHHHHHHHHCCC
Confidence 999999999999 9999999999999999999999766432110 12334678999999999999
No 104
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.73 E-value=1e-16 Score=136.68 Aligned_cols=143 Identities=13% Similarity=0.059 Sum_probs=103.0
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC----CCCCCccc
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL----PFASGFVD 234 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l----p~~~~~fD 234 (328)
..++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+.+..+. ..++.++.+|+... ++. ++||
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-----~~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-----RNNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-----CSSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-----CCCeEEEEcCCCCchhhcccc-ccee
Confidence 4578899999999999999999886456999999999988776665554 45788889998763 444 7899
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHH----HHHHHCCCe
Q 020307 235 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIE----DLCTSCGLT 310 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~ll~~~Gf~ 310 (328)
+|++.. .++ .+...+++++.++|||||++++...... .....+.+++. +.++++ |+
T Consensus 129 ~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~-f~ 188 (210)
T 1nt2_A 129 LIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIMVKARS-----------------IDSTAEPEEVFKSVLKEMEGD-FK 188 (210)
T ss_dssp EEEECC-CST-THHHHHHHHHHHHEEEEEEEEEEEEHHH-----------------HCTTSCHHHHHHHHHHHHHTT-SE
T ss_pred EEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEEecCC-----------------ccccCCHHHHHHHHHHHHHhh-cE
Confidence 999872 222 2233558999999999999999864311 00112344432 237888 99
Q ss_pred EEEEEEeCc----EEEEEEeC
Q 020307 311 NYTSKVQQS----FIMFAAQK 327 (328)
Q Consensus 311 ~v~~~~~~~----~~~~~a~k 327 (328)
+++.....+ .++++++|
T Consensus 189 ~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 189 IVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp EEEEEECTTTCTTEEEEEEEE
T ss_pred EeeeecCCCCCCCcEEEEEEc
Confidence 999766544 36777765
No 105
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.73 E-value=1.2e-16 Score=136.56 Aligned_cols=107 Identities=21% Similarity=0.244 Sum_probs=91.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CCCCccceEEe
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVHA 238 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~fD~i~~ 238 (328)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.|++++...+ ..++.++.+|+..++ +++++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG---VPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC---CSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 5679999999999999999999887899999999999999999988765 468999999998877 77889999999
Q ss_pred ccccccCC--------ChHHHHHHHHhcccCCcEEEEEEe
Q 020307 239 GAALHCWP--------SPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 239 ~~vl~h~~--------d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+....+.. ....+++++.++|||||++++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 86543322 125789999999999999999774
No 106
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.72 E-value=5.5e-17 Score=142.49 Aligned_cols=136 Identities=15% Similarity=0.220 Sum_probs=115.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.+++++...+. . +.+..+|+... +++++||+|+++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~---~-v~~~~~d~~~~-~~~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGV---R-PRFLEGSLEAA-LPFGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTC---C-CEEEESCHHHH-GGGCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChhhc-CcCCCCCEEEEC
Confidence 4678999999999999999999886 999999999999999999887652 2 88999988652 446789999997
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEeCc
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQS 319 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~~ 319 (328)
...++ ...+++++.++|||||+++++..... +.+++.++++++||++++....+.
T Consensus 192 ~~~~~---~~~~l~~~~~~LkpgG~lils~~~~~----------------------~~~~v~~~l~~~Gf~~~~~~~~~~ 246 (254)
T 2nxc_A 192 LYAEL---HAALAPRYREALVPGGRALLTGILKD----------------------RAPLVREAMAGAGFRPLEEAAEGE 246 (254)
T ss_dssp CCHHH---HHHHHHHHHHHEEEEEEEEEEEEEGG----------------------GHHHHHHHHHHTTCEEEEEEEETT
T ss_pred CcHHH---HHHHHHHHHHHcCCCCEEEEEeeccC----------------------CHHHHHHHHHHCCCEEEEEeccCC
Confidence 66554 46889999999999999999875431 357899999999999999999999
Q ss_pred EEEEEEeC
Q 020307 320 FIMFAAQK 327 (328)
Q Consensus 320 ~~~~~a~k 327 (328)
|..++++|
T Consensus 247 W~~l~~~k 254 (254)
T 2nxc_A 247 WVLLAYGR 254 (254)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 99998886
No 107
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.72 E-value=7.5e-17 Score=134.79 Aligned_cols=143 Identities=12% Similarity=0.179 Sum_probs=112.9
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCC--eEEEEecCCCCCCCCCccc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSN--LALVRADVCRLPFASGFVD 234 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~--i~~~~~d~~~lp~~~~~fD 234 (328)
+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.+++++...+ ..+ +.++.+|+.+. +++++||
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~~d~~~~-~~~~~~D 121 (194)
T 1dus_A 48 VVVDKDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLNN---LDNYDIRVVHSDLYEN-VKDRKYN 121 (194)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT---CTTSCEEEEECSTTTT-CTTSCEE
T ss_pred cccCCCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHcC---CCccceEEEECchhcc-cccCCce
Confidence 444577899999999999999999884 499999999999999999988765 344 99999999773 4567899
Q ss_pred eEEeccccccC-CChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 235 AVHAGAALHCW-PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 235 ~i~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
+|++..+++|. .+...+++++.++|||||++++.++... ...++.+.+++....+..
T Consensus 122 ~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~l~~~~~~~~~ 179 (194)
T 1dus_A 122 KIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ----------------------GAKSLAKYMKDVFGNVET 179 (194)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTH----------------------HHHHHHHHHHHHHSCCEE
T ss_pred EEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCC----------------------ChHHHHHHHHHHhcceEE
Confidence 99999888763 4567899999999999999999987542 113566677776223333
Q ss_pred EEEeCcEEEEEEeC
Q 020307 314 SKVQQSFIMFAAQK 327 (328)
Q Consensus 314 ~~~~~~~~~~~a~k 327 (328)
......|+++.++|
T Consensus 180 ~~~~~~~~~~~~~k 193 (194)
T 1dus_A 180 VTIKGGYRVLKSKK 193 (194)
T ss_dssp EEEETTEEEEEEEC
T ss_pred EecCCcEEEEEEee
Confidence 45667888888887
No 108
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.72 E-value=6.2e-17 Score=143.83 Aligned_cols=128 Identities=20% Similarity=0.216 Sum_probs=108.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhc-CcCCCCCeEEEEecCCCCCCCCCccc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADVCRLPFASGFVD 234 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~~~lp~~~~~fD 234 (328)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.|++++... + ..++.++.+|+.+ ++++++||
T Consensus 106 ~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~-~~~~~~fD 181 (275)
T 1yb2_A 106 CGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD-FISDQMYD 181 (275)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT-CCCSCCEE
T ss_pred cCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc-cCcCCCcc
Confidence 45567889999999999999999987 55679999999999999999998775 4 4689999999977 56678899
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 235 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
+|++ |++++..+++++.++|||||++++.++... ..+++.+.+++.||..++.
T Consensus 182 ~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~----------------------~~~~~~~~l~~~Gf~~~~~ 234 (275)
T 1yb2_A 182 AVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD----------------------QSEKTVLSLSASGMHHLET 234 (275)
T ss_dssp EEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH----------------------HHHHHHHHSGGGTEEEEEE
T ss_pred EEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------------HHHHHHHHHHHCCCeEEEE
Confidence 9998 678999999999999999999999885421 1346777888899987775
Q ss_pred E
Q 020307 315 K 315 (328)
Q Consensus 315 ~ 315 (328)
.
T Consensus 235 ~ 235 (275)
T 1yb2_A 235 V 235 (275)
T ss_dssp E
T ss_pred E
Confidence 4
No 109
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.71 E-value=4e-17 Score=139.44 Aligned_cols=125 Identities=17% Similarity=0.281 Sum_probs=104.3
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..++ .+++|+|+|+. ++.++.+|+.++|+++++||+|++
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred cCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEEE
Confidence 3467899999999999988773 38999999975 345789999999888899999999
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEe-
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQ- 317 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~- 317 (328)
..++|| .++..+++++.++|||||++++.++... +.+.+++.++++++||++++....
T Consensus 122 ~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~--------------------~~~~~~~~~~l~~~Gf~~~~~~~~~ 180 (215)
T 2zfu_A 122 CLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSSR--------------------FEDVRTFLRAVTKLGFKIVSKDLTN 180 (215)
T ss_dssp ESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGGG--------------------CSCHHHHHHHHHHTTEEEEEEECCS
T ss_pred ehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCCC--------------------CCCHHHHHHHHHHCCCEEEEEecCC
Confidence 999964 8999999999999999999999885421 238899999999999998885443
Q ss_pred CcEEEEEEeC
Q 020307 318 QSFIMFAAQK 327 (328)
Q Consensus 318 ~~~~~~~a~k 327 (328)
..+.+++++|
T Consensus 181 ~~~~~~~~~k 190 (215)
T 2zfu_A 181 SHFFLFDFQK 190 (215)
T ss_dssp TTCEEEEEEE
T ss_pred CeEEEEEEEe
Confidence 4457777776
No 110
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.71 E-value=4.6e-17 Score=140.35 Aligned_cols=117 Identities=14% Similarity=0.221 Sum_probs=100.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecC-CCCCCC-CCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLPFA-SGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp~~-~~~fD~i~ 237 (328)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ .+++.++++|+ ..+|++ +++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARAN--------APHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccCCcCCCCEEEEE
Confidence 4678999999999999999999865 999999999999999987 45799999999 678887 88999999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 238 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 238 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
+. .++..+++++.++|||||+++. + ....+.+++.+.++++||+.+...
T Consensus 117 ~~------~~~~~~l~~~~~~LkpgG~l~~--~---------------------~~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 117 SR------RGPTSVILRLPELAAPDAHFLY--V---------------------GPRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp EE------SCCSGGGGGHHHHEEEEEEEEE--E---------------------ESSSCCTHHHHHHHHTTCEEEEEE
T ss_pred eC------CCHHHHHHHHHHHcCCCcEEEE--e---------------------CCcCCHHHHHHHHHHCCCeEEEEE
Confidence 87 4788889999999999999991 1 112456689999999999887743
No 111
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.71 E-value=1.2e-17 Score=144.08 Aligned_cols=148 Identities=16% Similarity=0.203 Sum_probs=98.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCC-HHHHHHH---HHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFS-ENMLRQC---YDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s-~~~~~~a---~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
.++.+|||||||+|.++..+++..+..+|+|+|+| +.+++.| +++....+ ..++.++++|+..+|. ..+|.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~---~~~v~~~~~d~~~l~~--~~~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG---LSNVVFVIAAAESLPF--ELKNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC---CSSEEEECCBTTBCCG--GGTTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCHHHhhh--hccCe
Confidence 46789999999999999999987777899999999 7777766 66665554 4689999999998863 23355
Q ss_pred EEeccccccC--------CChHHHHHHHHhcccCCcEEEEEEeccCC-CCcchhhHHHHHhhhc-cCCCCCHHHHHHHHH
Q 020307 236 VHAGAALHCW--------PSPSNAVAEISRILRSGGVFVGTTFLRYT-SSTSLTGRVLRERILQ-NYNYLTEEEIEDLCT 305 (328)
Q Consensus 236 i~~~~vl~h~--------~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ll~ 305 (328)
|.+..+...+ .++..+|+++.|+|||||++++....... ...+. ... ..+. ...++..+++.++++
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~el~~~l~ 173 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEI---KKR-GLPLLSKAYFLSEQYKAELS 173 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC------------------CCHHHHHSHHHHHHHH
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchh---hhc-CCCCCChhhcchHHHHHHHH
Confidence 5544433222 23457899999999999999994433221 00010 000 0010 001112235999999
Q ss_pred HCCCeEEEEEE
Q 020307 306 SCGLTNYTSKV 316 (328)
Q Consensus 306 ~~Gf~~v~~~~ 316 (328)
++||++.....
T Consensus 174 ~aGf~v~~~~~ 184 (225)
T 3p2e_A 174 NSGFRIDDVKE 184 (225)
T ss_dssp HHTCEEEEEEE
T ss_pred HcCCCeeeeee
Confidence 99999887544
No 112
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.71 E-value=1e-16 Score=142.10 Aligned_cols=108 Identities=10% Similarity=0.053 Sum_probs=91.5
Q ss_pred hhccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccc
Q 020307 155 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVD 234 (328)
Q Consensus 155 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD 234 (328)
.++...++.+|||||||+|.++..+..+.++.+|+|+|+|+++++.|+++++..+ ..++.++++|+.++| +++||
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~g---l~~v~~v~gDa~~l~--d~~FD 190 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLG---VDGVNVITGDETVID--GLEFD 190 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHT---CCSEEEEESCGGGGG--GCCCS
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEECchhhCC--CCCcC
Confidence 3456678999999999998776554444346799999999999999999998766 468999999998876 78999
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 235 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+|++... .+++.++++++.++|||||++++...
T Consensus 191 vV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 191 VLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9998655 57899999999999999999999774
No 113
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.71 E-value=4.5e-18 Score=147.67 Aligned_cols=106 Identities=14% Similarity=0.239 Sum_probs=87.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC--CCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~i~ 237 (328)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.|+++.... ..++.++.+|+.++ ++++++||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhc----CCCeEEEecCHHHhhcccCCCceEEEE
Confidence 4678999999999999999977653 48999999999999999987654 35799999999887 88889999999
Q ss_pred e-ccccccCC-----ChHHHHHHHHhcccCCcEEEEEEec
Q 020307 238 A-GAALHCWP-----SPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 238 ~-~~vl~h~~-----d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+ .+.+ +.+ ++..+++++.++|||||++++.+..
T Consensus 134 ~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 134 YDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 9 5553 222 3347799999999999999987643
No 114
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.70 E-value=1.5e-16 Score=135.95 Aligned_cols=107 Identities=18% Similarity=0.231 Sum_probs=90.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CCCCccceEEe
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVHA 238 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~fD~i~~ 238 (328)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.|++++...+ ..++.++.+|+..++ +++++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~---~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE---AQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC---CSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 5679999999999999999999878899999999999999999988765 468999999998876 67889999987
Q ss_pred ccccccCCC--------hHHHHHHHHhcccCCcEEEEEEe
Q 020307 239 GAALHCWPS--------PSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 239 ~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.....+... ...+++++.++|||||++++.+.
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 654322211 25789999999999999999874
No 115
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.70 E-value=1.8e-16 Score=132.20 Aligned_cols=125 Identities=19% Similarity=0.237 Sum_probs=103.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC-Cccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-GFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.+++++...+. ..++.+..+|+.. +++. ++||+
T Consensus 29 ~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~-~~~~~~~~D~ 103 (192)
T 1l3i_A 29 AEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGL--GDNVTLMEGDAPE-ALCKIPDIDI 103 (192)
T ss_dssp HCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTC--CTTEEEEESCHHH-HHTTSCCEEE
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCC--CcceEEEecCHHH-hcccCCCCCE
Confidence 445678899999999999999999987 4999999999999999999877652 3689999999865 2233 58999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeE
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 311 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 311 (328)
|++..+++ +...+++++.++|+|||++++.++... +..++.+++++.||.+
T Consensus 104 v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~~----------------------~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 104 AVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAILLE----------------------TKFEAMECLRDLGFDV 154 (192)
T ss_dssp EEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECBHH----------------------HHHHHHHHHHHTTCCC
T ss_pred EEECCchH---HHHHHHHHHHHhcCCCcEEEEEecCcc----------------------hHHHHHHHHHHCCCce
Confidence 99988775 468899999999999999999875421 2357889999999943
No 116
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.70 E-value=7.5e-16 Score=132.85 Aligned_cols=131 Identities=16% Similarity=0.154 Sum_probs=104.1
Q ss_pred cCCCeEEEEcCC-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-CCCCCccceEE
Q 020307 160 AQGGLLVDVSCG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD~i~ 237 (328)
.++.+|||+||| +|.++..+++.. ..+|+|+|+|+.+++.|++++...+ . ++.++.+|+..+ ++++++||+|+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~-~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN---S-NVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT---C-CCEEEECSSCSSTTTCCSCEEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC---C-CcEEEeCCchhhhhcccCceeEEE
Confidence 467899999999 999999999984 3499999999999999999988764 3 899999997433 35568999999
Q ss_pred eccccccCCC-------------------hHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHH
Q 020307 238 AGAALHCWPS-------------------PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEE 298 (328)
Q Consensus 238 ~~~vl~h~~d-------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (328)
++-.+++..+ ...+++++.++|||||++++..+... ...+
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------~~~~ 187 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------------------KLLN 187 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---------------------HHHH
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---------------------hHHH
Confidence 9866655433 36789999999999999999875421 1235
Q ss_pred HHHHHHHHCCCeEEEEEE
Q 020307 299 EIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 299 ~l~~ll~~~Gf~~v~~~~ 316 (328)
++.+++++.||++.....
T Consensus 188 ~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 188 VIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHcCCceEEEEe
Confidence 788999999998776544
No 117
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.69 E-value=6.7e-17 Score=137.51 Aligned_cols=107 Identities=22% Similarity=0.336 Sum_probs=94.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.++. +++|+|+|+.+++.++++... ..++.++.+|+..+++++++||+|++.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~~~~~~~fD~v~~~ 114 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKLDFPSASFDVVLEK 114 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSCCSCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcCCCCCCcccEEEEC
Confidence 46789999999999999999998743 899999999999999988654 458999999999988888999999999
Q ss_pred cccccCC---------------ChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 240 AALHCWP---------------SPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 240 ~vl~h~~---------------d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
.+++|+. ++..+++++.++|||||++++.++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 115 GTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 9887765 55789999999999999999998654
No 118
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.69 E-value=9.1e-16 Score=127.02 Aligned_cols=123 Identities=16% Similarity=0.205 Sum_probs=103.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++ +..+++|+|+|+.+++.+++++...+ ..++.++.+|+.+ ++++++||+|
T Consensus 31 ~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~d~~~-~~~~~~~D~i 104 (183)
T 2yxd_A 31 LNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN---IKNCQIIKGRAED-VLDKLEFNKA 104 (183)
T ss_dssp HCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT---CCSEEEEESCHHH-HGGGCCCSEE
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC---CCcEEEEECCccc-cccCCCCcEE
Confidence 4445678999999999999999998 45699999999999999999988765 3679999999877 6667899999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
++..+ .++..+++++.++ |||++++.++... +..++.+.++++||.+..
T Consensus 105 ~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~----------------------~~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 105 FIGGT----KNIEKIIEILDKK--KINHIVANTIVLE----------------------NAAKIINEFESRGYNVDA 153 (183)
T ss_dssp EECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH----------------------HHHHHHHHHHHTTCEEEE
T ss_pred EECCc----ccHHHHHHHHhhC--CCCEEEEEecccc----------------------cHHHHHHHHHHcCCeEEE
Confidence 99988 6788999999998 9999999885421 135788999999986554
No 119
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.69 E-value=3.8e-16 Score=130.14 Aligned_cols=107 Identities=19% Similarity=0.183 Sum_probs=85.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-CCCCccceEEe
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~i~~ 238 (328)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++...+ ..++.++..+...++ +.+++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDLG---IENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHHT---CCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 467899999999999999999984 499999999999999999998765 468999998877653 44778999988
Q ss_pred cc-cccc-------C-CChHHHHHHHHhcccCCcEEEEEEec
Q 020307 239 GA-ALHC-------W-PSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 239 ~~-vl~h-------~-~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+. .+++ . .+...+++++.++|||||++++..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 73 3322 1 23357889999999999999998764
No 120
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.68 E-value=4.8e-16 Score=134.58 Aligned_cols=150 Identities=18% Similarity=0.191 Sum_probs=106.8
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC---CCCCCCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---lp~~~~~ 232 (328)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.+.+..+. ..++.++.+|+.+ +++.+++
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-----~~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-----RTNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-----CTTEEEECSCTTCGGGGGGGCCC
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-----cCCeEEEEcccCChhhhcccCCc
Confidence 33456889999999999999999987 4556999999999988877777665 4689999999977 4555789
Q ss_pred cceEEeccccccCCCh-HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeE
Q 020307 233 VDAVHAGAALHCWPSP-SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 311 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~-~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 311 (328)
||+|++... .++. ..+++++.++|||||++++............... .+. ++ .++|+++||++
T Consensus 148 ~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-----------~~~-~~-~~~l~~~Gf~~ 211 (233)
T 2ipx_A 148 VDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEA-----------VFA-SE-VKKMQQENMKP 211 (233)
T ss_dssp EEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHH-----------HHH-HH-HHTTGGGTEEE
T ss_pred EEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHH-----------HHH-HH-HHHHHHCCCce
Confidence 999998544 2233 4568899999999999999654321000000000 011 23 48889999999
Q ss_pred EEEEEeCc----EEEEEEeC
Q 020307 312 YTSKVQQS----FIMFAAQK 327 (328)
Q Consensus 312 v~~~~~~~----~~~~~a~k 327 (328)
++.....+ .+++++++
T Consensus 212 ~~~~~~~~~~~~~~~v~~~~ 231 (233)
T 2ipx_A 212 QEQLTLEPYERDHAVVVGVY 231 (233)
T ss_dssp EEEEECTTTSSSEEEEEEEE
T ss_pred EEEEecCCccCCcEEEEEEe
Confidence 88655443 46666654
No 121
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.68 E-value=3.5e-16 Score=137.16 Aligned_cols=128 Identities=20% Similarity=0.283 Sum_probs=107.1
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++. ++..+++++|+|+.+++.|+++++..++ ..++.++.+|+.+. +++++||+
T Consensus 89 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~-~~~~~~D~ 165 (255)
T 3mb5_A 89 AGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLKDIYEG-IEEENVDH 165 (255)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECSCGGGC-CCCCSEEE
T ss_pred hCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEECchhhc-cCCCCcCE
Confidence 45567889999999999999999998 7777999999999999999999987763 34599999999754 66788999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCC--CeEEE
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCG--LTNYT 313 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~G--f~~v~ 313 (328)
|++ +.+++..+++++.++|||||++++..+... ..+++.+.+++.| |..++
T Consensus 166 v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~l~~~g~~f~~~~ 218 (255)
T 3mb5_A 166 VIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSN----------------------QVMRLHEKLREFKDYFMKPR 218 (255)
T ss_dssp EEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHH----------------------HHHHHHHHHHHTGGGBSCCE
T ss_pred EEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHH----------------------HHHHHHHHHHHcCCCccccE
Confidence 997 567888999999999999999999875421 1346778889999 87665
Q ss_pred E
Q 020307 314 S 314 (328)
Q Consensus 314 ~ 314 (328)
.
T Consensus 219 ~ 219 (255)
T 3mb5_A 219 T 219 (255)
T ss_dssp E
T ss_pred E
Confidence 3
No 122
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.68 E-value=2.3e-16 Score=142.65 Aligned_cols=154 Identities=17% Similarity=0.204 Sum_probs=112.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCc----CCCCCeEEEEecCCCCC----CC--C
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT----ILTSNLALVRADVCRLP----FA--S 230 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~----~~~~~i~~~~~d~~~lp----~~--~ 230 (328)
++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.++++....+. ....++.++++|+..++ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 67899999999999999998753 56999999999999999998764310 00347899999998876 53 4
Q ss_pred CccceEEeccccccC-CC---hHHHHHHHHhcccCCcEEEEEEeccCCCCc--------chhhHH-----HHH-------
Q 020307 231 GFVDAVHAGAALHCW-PS---PSNAVAEISRILRSGGVFVGTTFLRYTSST--------SLTGRV-----LRE------- 286 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~-~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~--------~~~~~~-----~~~------- 286 (328)
++||+|++..++||+ .+ +..+|+++.++|||||++++.+++...... .+ +.. +..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~ 191 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESF-GNEIYTVKFQKKGDYPLF 191 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEE-ECSSEEEEESCSSCCCSS
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCcc-CCeeEEEEeCCCCCCCCc
Confidence 589999999999988 43 468999999999999999999986420000 00 000 000
Q ss_pred ----------hhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 287 ----------RILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 287 ----------~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
.........+.+++.++++++||+++....
T Consensus 192 ~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~ 231 (313)
T 3bgv_A 192 GCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKT 231 (313)
T ss_dssp CCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEE
T ss_pred cceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecC
Confidence 000112246789999999999999998543
No 123
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.68 E-value=2.4e-16 Score=138.19 Aligned_cols=146 Identities=16% Similarity=0.062 Sum_probs=107.9
Q ss_pred CCCeEEEEcCCc--CHHHHH-HHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC------CCCC
Q 020307 161 QGGLLVDVSCGS--GLFSRK-FAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FASG 231 (328)
Q Consensus 161 ~~~~vLDiGcG~--G~~~~~-l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~~~ 231 (328)
...+|||||||+ +.++.. +.+..|..+|+++|.|+.|++.|++++.... ..++.++++|+.+++ ...+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEecccChhhhhccccccc
Confidence 446899999997 334444 4445678899999999999999999886532 347999999998752 1134
Q ss_pred ccc-----eEEeccccccCCC---hHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH---hhhccCCCCCHHHH
Q 020307 232 FVD-----AVHAGAALHCWPS---PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE---RILQNYNYLTEEEI 300 (328)
Q Consensus 232 ~fD-----~i~~~~vl~h~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l 300 (328)
.|| .|+++.+|||+++ |..+++++.+.|+|||+|++++..... .+...+.+.. .......+++.+++
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~--~p~~~~~~~~~~~~~g~p~~~rs~~ei 232 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEF--APQEVGRVAREYAARNMPMRLRTHAEA 232 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTT--SHHHHHHHHHHHHHTTCCCCCCCHHHH
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCC--CHHHHHHHHHHHHhcCCCCccCCHHHH
Confidence 566 5889999999998 578999999999999999999877542 1111111111 12234678899999
Q ss_pred HHHHHHCCCeEEE
Q 020307 301 EDLCTSCGLTNYT 313 (328)
Q Consensus 301 ~~ll~~~Gf~~v~ 313 (328)
.++|. ||++++
T Consensus 233 ~~~f~--Glelve 243 (277)
T 3giw_A 233 EEFFE--GLELVE 243 (277)
T ss_dssp HHTTT--TSEECT
T ss_pred HHHhC--CCcccC
Confidence 99995 998654
No 124
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.67 E-value=1.1e-15 Score=135.67 Aligned_cols=141 Identities=12% Similarity=0.142 Sum_probs=111.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+++++...+ ..++.++.+|+.+. +++++||+|+++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~---~~~v~~~~~d~~~~-~~~~~fD~Iv~n 183 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA---IKNIHILQSDWFSA-LAGQQFAMIVSN 183 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT---CCSEEEECCSTTGG-GTTCCEEEEEEC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEcchhhh-cccCCccEEEEC
Confidence 45679999999999999999988777799999999999999999988765 34799999999763 446789999998
Q ss_pred -------------cccccCC------------ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCC
Q 020307 240 -------------AALHCWP------------SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNY 294 (328)
Q Consensus 240 -------------~vl~h~~------------d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (328)
.+++|.| +...+++++.++|||||++++... +
T Consensus 184 pPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~-----------------------~ 240 (276)
T 2b3t_A 184 PPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG-----------------------W 240 (276)
T ss_dssp CCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------------------S
T ss_pred CCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------------------c
Confidence 4555544 236789999999999999998642 2
Q ss_pred CCHHHHHHHHHHCCCeEEEEEE--eCcEEEEEEeC
Q 020307 295 LTEEEIEDLCTSCGLTNYTSKV--QQSFIMFAAQK 327 (328)
Q Consensus 295 ~~~~~l~~ll~~~Gf~~v~~~~--~~~~~~~~a~k 327 (328)
.+.+++.++++++||+.++... .+.--+++++|
T Consensus 241 ~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 241 QQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp SCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred hHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 3567899999999998665433 33345555654
No 125
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.67 E-value=4e-16 Score=133.81 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=90.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C--CCCCccceEE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P--FASGFVDAVH 237 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p--~~~~~fD~i~ 237 (328)
++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.|++++...+ ..++.++++|+.++ + +++++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~---l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG---LSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT---CSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC---CCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 5679999999999999999999888889999999999999999988766 56899999998763 3 6789999999
Q ss_pred eccccccCCCh--------HHHHHHHHhcccCCcEEEEEEec
Q 020307 238 AGAALHCWPSP--------SNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 238 ~~~vl~h~~d~--------~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+++...+.... ..+++++.++|||||++++.+..
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 87543322221 25899999999999999998853
No 126
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.67 E-value=5.3e-16 Score=136.04 Aligned_cols=128 Identities=13% Similarity=0.076 Sum_probs=108.1
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhc-CcCCCCCeEEEEecCCCCCCCCCccc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADVCRLPFASGFVD 234 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~~~lp~~~~~fD 234 (328)
+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|++++... + ..++.+..+|+.+.++++++||
T Consensus 92 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~~~~~~~~~D 168 (258)
T 2pwy_A 92 LDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGKLEEAELEEAAYD 168 (258)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESCGGGCCCCTTCEE
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECchhhcCCCCCCcC
Confidence 45567889999999999999999998 66679999999999999999998765 4 4689999999988877788999
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 235 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
+|++ +++++..+++++.++|||||++++.++... ...++.+.++++||..++.
T Consensus 169 ~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------------~~~~~~~~l~~~gf~~~~~ 221 (258)
T 2pwy_A 169 GVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT----------------------QVLELVRAAEAHPFRLERV 221 (258)
T ss_dssp EEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH----------------------HHHHHHHHHTTTTEEEEEE
T ss_pred EEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH----------------------HHHHHHHHHHHCCCceEEE
Confidence 9997 467888999999999999999999885421 1246667788899987664
No 127
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.67 E-value=1.8e-15 Score=124.56 Aligned_cols=118 Identities=17% Similarity=0.166 Sum_probs=99.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. ..++.++++|+.+ ++++++||+|+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~------------~~~~~~~~~d~~~-~~~~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES------------HRGGNLVRADLLC-SINQESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT------------CSSSCEEECSTTT-TBCGGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc------------ccCCeEEECChhh-hcccCCCCEEEEC
Confidence 457799999999999999999987 99999999999976 1267899999977 5667899999999
Q ss_pred cccccCCCh---------HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCe
Q 020307 240 AALHCWPSP---------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLT 310 (328)
Q Consensus 240 ~vl~h~~d~---------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~ 310 (328)
..+++.+++ ..+++++.+.| |||++++.++.. .+.+++.++++++||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~----------------------~~~~~l~~~l~~~gf~ 142 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA----------------------NRPKEVLARLEERGYG 142 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG----------------------GCHHHHHHHHHHTTCE
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC----------------------CCHHHHHHHHHHCCCc
Confidence 888877665 57889999999 999999988542 2457899999999998
Q ss_pred EEEEEE
Q 020307 311 NYTSKV 316 (328)
Q Consensus 311 ~v~~~~ 316 (328)
.+....
T Consensus 143 ~~~~~~ 148 (170)
T 3q87_B 143 TRILKV 148 (170)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 776533
No 128
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.66 E-value=1.3e-15 Score=134.09 Aligned_cols=145 Identities=11% Similarity=0.168 Sum_probs=111.1
Q ss_pred cccc-CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CCCCcc
Q 020307 157 FKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFV 233 (328)
Q Consensus 157 l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~f 233 (328)
+... ++.+|||+|||+|.++..+++.++. +|+|+|+++.+++.|++++...++ ..++.++.+|+.+++ +++++|
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~--~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQL--EDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTC--TTTEEEECSCGGGGGGTSCTTCE
T ss_pred hcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCC--cccEEEEECcHHHhhhhhccCCc
Confidence 4445 6889999999999999999998653 999999999999999999988764 457999999998765 457899
Q ss_pred ceEEeccccccC-----C---------------ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCC
Q 020307 234 DAVHAGAALHCW-----P---------------SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYN 293 (328)
Q Consensus 234 D~i~~~~vl~h~-----~---------------d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (328)
|+|+++-.+.+. . +...+++.+.++|||||++++..+.
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---------------------- 178 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP---------------------- 178 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT----------------------
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH----------------------
Confidence 999996443222 1 2356899999999999999996532
Q ss_pred CCCHHHHHHHHHHCCCeEEEEEEe-------CcEEEEEEeC
Q 020307 294 YLTEEEIEDLCTSCGLTNYTSKVQ-------QSFIMFAAQK 327 (328)
Q Consensus 294 ~~~~~~l~~ll~~~Gf~~v~~~~~-------~~~~~~~a~k 327 (328)
....++...+++.||...+.... ...+++.++|
T Consensus 179 -~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k 218 (259)
T 3lpm_A 179 -ERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIK 218 (259)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEE
T ss_pred -HHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEe
Confidence 23457888899999987765331 2345565554
No 129
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.66 E-value=3.7e-15 Score=128.42 Aligned_cols=151 Identities=11% Similarity=0.063 Sum_probs=105.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC---CCCCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~ 232 (328)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++...+.... ..++.++.+|+.... ...++
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----r~nv~~i~~Da~~~~~~~~~~~~ 146 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----RPNIFPLLADARFPQSYKSVVEN 146 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----CTTEEEEECCTTCGGGTTTTCCC
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----cCCeEEEEcccccchhhhccccc
Confidence 34668999999999999999999886 5677999999999987655544443 468999999997643 12468
Q ss_pred cceEEeccccccCCChHHHH-HHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeE
Q 020307 233 VDAVHAGAALHCWPSPSNAV-AEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 311 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l-~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 311 (328)
||+|++.... ++....+ ..+.++|||||+++++..... . .... .....+ ++..+.|+++||++
T Consensus 147 ~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~---~-------d~t~-~~~e~~--~~~~~~L~~~gf~~ 210 (232)
T 3id6_C 147 VDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARS---I-------DVTK-DPKEIY--KTEVEKLENSNFET 210 (232)
T ss_dssp EEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-----------------C-CSSSST--THHHHHHHHTTEEE
T ss_pred eEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCC---c-------ccCC-CHHHHH--HHHHHHHHHCCCEE
Confidence 9999987553 5555554 455669999999999853211 0 0000 011111 34567788999999
Q ss_pred EEEEEeCcE----EEEEEeCC
Q 020307 312 YTSKVQQSF----IMFAAQKP 328 (328)
Q Consensus 312 v~~~~~~~~----~~~~a~k~ 328 (328)
++...-.+| ++++++|+
T Consensus 211 ~~~~~l~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 211 IQIINLDPYDKDHAIVLSKYK 231 (232)
T ss_dssp EEEEECTTTCSSCEEEEEEEC
T ss_pred EEEeccCCCcCceEEEEEEeC
Confidence 997775554 77777763
No 130
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.65 E-value=9.1e-16 Score=129.12 Aligned_cols=112 Identities=17% Similarity=0.266 Sum_probs=92.3
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-CCCCccceE
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAV 236 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~i 236 (328)
..++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.|++++...++ ..++.++++|+..++ +.+++||+|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL--IDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC--GGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHHhhhccCCceEE
Confidence 356789999999999999999987 3456999999999999999999887653 368999999998775 556899999
Q ss_pred Eeccccc---------cCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 237 HAGAALH---------CWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 237 ~~~~vl~---------h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++...+. +..++..+++++.++|||||++++..+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 9887551 11134579999999999999999988654
No 131
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=9.7e-16 Score=130.28 Aligned_cols=104 Identities=18% Similarity=0.140 Sum_probs=92.2
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+ ..++.++.+|+.+.+..+++||+|
T Consensus 73 l~~~~~~~vLdiG~G~G~~~~~la~~~~--~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 73 LELTPQSRVLEIGTGSGYQTAILAHLVQ--HVCSVERIKGLQWQARRRLKNLD---LHNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGCCGGGCCEEEE
T ss_pred cCCCCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEecCHHHHHHHHHHHHHcC---CCceEEEECCcccCCccCCCccEE
Confidence 4456788999999999999999999854 99999999999999999998766 458999999998766667899999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
++..+++|+++ ++.++|||||++++..+.
T Consensus 148 ~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 99999999986 578999999999998876
No 132
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.65 E-value=3.6e-16 Score=128.89 Aligned_cols=150 Identities=11% Similarity=0.049 Sum_probs=110.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.+..+|||+|||+|.++..++...|..+|+++|+|+.|++.+++++...+. ..++.+ .|.... .+.++||+|++.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~--~~~v~~--~d~~~~-~~~~~~DvVLa~ 122 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT--TIKYRF--LNKESD-VYKGTYDVVFLL 122 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC--SSEEEE--ECCHHH-HTTSEEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CccEEE--eccccc-CCCCCcChhhHh
Confidence 457799999999999999999998888999999999999999999988663 224555 666443 346789999999
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEeCc
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQS 319 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~~ 319 (328)
.+|||+.+....+..+.+.|||||+++...--.-. +.. ..+.-.-...|++.+ ...+.++++...++
T Consensus 123 k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~-----------Gr~-~gm~~~Y~~~~~~~~-~~~~~~~~~~~~~n 189 (200)
T 3fzg_A 123 KMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLS-----------GKE-KGMEENYQLWFESFT-KGWIKILDSKVIGN 189 (200)
T ss_dssp TCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC-------------C-TTCCCCHHHHHHHHT-TTTSCEEEEEEETT
T ss_pred hHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhc-----------CCC-cchhhhHHHHHHHhc-cCcceeeeeeeeCc
Confidence 99999977778888999999999988776611100 000 112222244666666 56666777677776
Q ss_pred EEEEEEeC
Q 020307 320 FIMFAAQK 327 (328)
Q Consensus 320 ~~~~~a~k 327 (328)
-++++-+|
T Consensus 190 El~y~~~~ 197 (200)
T 3fzg_A 190 ELVYITSG 197 (200)
T ss_dssp EEEEEECC
T ss_pred eEEEEEec
Confidence 65555443
No 133
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.64 E-value=2.2e-15 Score=127.71 Aligned_cols=121 Identities=21% Similarity=0.185 Sum_probs=99.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..++...+..+++|+|+|+.+++.+++++...+ ..++.++.+|+..++ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~-~~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK---LENIEPVQSRVEEFP-SEPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CSSEEEEECCTTTSC-CCSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEecchhhCC-ccCCcCEEEEec
Confidence 4789999999999999999998777799999999999999999988765 446999999998876 457899999754
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 241 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 241 vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
+.++..+++++.++|+|||++++.... ...+++.++++ ||+.++.
T Consensus 141 ----~~~~~~~l~~~~~~L~~gG~l~~~~~~-----------------------~~~~~~~~~~~--g~~~~~~ 185 (207)
T 1jsx_A 141 ----FASLNDMVSWCHHLPGEQGRFYALKGQ-----------------------MPEDEIALLPE--EYQVESV 185 (207)
T ss_dssp ----SSSHHHHHHHHTTSEEEEEEEEEEESS-----------------------CCHHHHHTSCT--TEEEEEE
T ss_pred ----cCCHHHHHHHHHHhcCCCcEEEEEeCC-----------------------CchHHHHHHhc--CCceeee
Confidence 356789999999999999999997521 23456666655 9987763
No 134
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.64 E-value=7.7e-16 Score=134.70 Aligned_cols=129 Identities=12% Similarity=-0.033 Sum_probs=105.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC---CCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---SGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~---~~~fD~i 236 (328)
.++.+|||||||+|..+..++...+..+|+++|+|+.+++.+++++...+ ..++.++.+|+++++.. +++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---l~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG---LKGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---CSSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC---CCceEEEECcHHHhhcccccCCCceEE
Confidence 46789999999999999999998778899999999999999999998876 45699999999877643 4789999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
++..+ .+...+++.+.++|||||++++...... .. ...++...++..||++.+..
T Consensus 156 ~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~-------~~-------------e~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 156 VARAV----APLCVLSELLLPFLEVGGAAVAMKGPRV-------EE-------------ELAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp EEESS----CCHHHHHHHHGGGEEEEEEEEEEECSCC-------HH-------------HHTTHHHHHHHHTEEEEEEE
T ss_pred EECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCCc-------HH-------------HHHHHHHHHHHcCCeEEEEE
Confidence 98654 5678999999999999999998663211 11 12357778889999887754
No 135
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.64 E-value=1e-15 Score=128.11 Aligned_cols=110 Identities=19% Similarity=0.138 Sum_probs=94.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~fD~i~ 237 (328)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|++++...+ ..++.++++|+.+++ +++++||+|+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~fD~i~ 118 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALG---LSGATLRRGAVAAVVAAGTTSPVDLVL 118 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHT---CSCEEEEESCHHHHHHHCCSSCCSEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcC---CCceEEEEccHHHHHhhccCCCccEEE
Confidence 467899999999999999888764 4589999999999999999988765 468999999997754 3468999999
Q ss_pred eccccccC-CChHHHHHHHHh--cccCCcEEEEEEeccC
Q 020307 238 AGAALHCW-PSPSNAVAEISR--ILRSGGVFVGTTFLRY 273 (328)
Q Consensus 238 ~~~vl~h~-~d~~~~l~~~~r--~LkpgG~l~i~~~~~~ 273 (328)
+...+++. ++...+++++.+ +|||||++++..+...
T Consensus 119 ~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 119 ADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred ECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 99887775 567889999999 9999999999887653
No 136
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.64 E-value=9.5e-16 Score=132.97 Aligned_cols=109 Identities=19% Similarity=0.258 Sum_probs=87.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHh------cCcCCCCCeEEEEecCCC-CC--CCC
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ------DNTILTSNLALVRADVCR-LP--FAS 230 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~------~~~~~~~~i~~~~~d~~~-lp--~~~ 230 (328)
.++.+|||||||+|.++..+++..+...++|+|+|+.+++.|++++.. .+ ..++.++++|+.. ++ +++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~---~~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG---FQNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC---CTTEEEEECCTTTCHHHHCCT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC---CCeEEEEECcHHHhhhhhCCC
Confidence 456799999999999999999998888999999999999999987653 22 5689999999986 66 778
Q ss_pred CccceEEeccccccCCC--------hHHHHHHHHhcccCCcEEEEEEec
Q 020307 231 GFVDAVHAGAALHCWPS--------PSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
++||.|++...-.+... ...+++++.++|||||.|++.+..
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99999987543222110 136899999999999999998754
No 137
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.63 E-value=5.1e-15 Score=131.67 Aligned_cols=130 Identities=15% Similarity=0.155 Sum_probs=106.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+.. +|+|+|+|+.+++.|++++...++ ..++.++++|+.+++. +++||+|++.
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~--~~~v~~~~~D~~~~~~-~~~fD~Vi~~ 199 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFPG-ENIADRILMG 199 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCCC-CSCEEEEEEC
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECCHHHhcc-cCCccEEEEC
Confidence 35789999999999999999999763 699999999999999999987764 4459999999988875 7789999985
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
.. .+...+++++.++|||||++++.+..... ....-..+++.+.++++||+...
T Consensus 200 ~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~----------------~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 200 YV----VRTHEFIPKALSIAKDGAIIHYHNTVPEK----------------LMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp CC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG----------------GTTTTTHHHHHHHHHHTTCEEEE
T ss_pred Cc----hhHHHHHHHHHHHCCCCeEEEEEEeeccc----------------cccccHHHHHHHHHHHcCCeeEE
Confidence 33 45568899999999999999998875421 11123456888999999997655
No 138
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.63 E-value=1.9e-14 Score=123.91 Aligned_cols=147 Identities=16% Similarity=0.185 Sum_probs=107.1
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC---CCCCccc
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFVD 234 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~fD 234 (328)
..++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.++++++. ..++.++.+|+.... ...++||
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-----RRNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-----CTTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-----cCCCEEEEccCCCcchhhcccCCce
Confidence 457889999999999999999987 5556999999999999999888765 468999999997632 1235899
Q ss_pred eEEeccccccCCChH-HHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 235 AVHAGAALHCWPSPS-NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
+|++... .++.. .+++++.++|||||++++..........+. ...+..+++..+ +++ |++++
T Consensus 146 ~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~------------~~~~~~~~l~~l-~~~-f~~~~ 208 (227)
T 1g8a_A 146 VIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKE------------PEQVFREVEREL-SEY-FEVIE 208 (227)
T ss_dssp EEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSC------------HHHHHHHHHHHH-HTT-SEEEE
T ss_pred EEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCC------------hhhhhHHHHHHH-Hhh-ceeee
Confidence 9997654 23333 459999999999999999843221111110 002235677777 777 99988
Q ss_pred EEEeCc----EEEEEEeC
Q 020307 314 SKVQQS----FIMFAAQK 327 (328)
Q Consensus 314 ~~~~~~----~~~~~a~k 327 (328)
.....+ .++++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 209 RLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp EEECTTTSSSEEEEEEEC
T ss_pred EeccCcccCCCEEEEEEe
Confidence 665433 47777776
No 139
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.63 E-value=2e-16 Score=134.42 Aligned_cols=130 Identities=16% Similarity=0.045 Sum_probs=85.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC-----Cccc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-----GFVD 234 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-----~~fD 234 (328)
.++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++...+ . ++.++++|+.+ ++++ ++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d~~~-~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG---A-VVDWAAADGIE-WLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHH-HHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC---C-ceEEEEcchHh-hhhhhhhccCccc
Confidence 56789999999999999999999877799999999999999999877643 2 78888899876 5555 8999
Q ss_pred eEEeccccc------cCCCh--------------------HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhh
Q 020307 235 AVHAGAALH------CWPSP--------------------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERI 288 (328)
Q Consensus 235 ~i~~~~vl~------h~~d~--------------------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 288 (328)
+|+++..++ |+... ..+++++.++|||||++++.+..
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~----------------- 166 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG----------------- 166 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT-----------------
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC-----------------
Confidence 999964432 22211 67789999999999995554422
Q ss_pred hccCCCCCHHHHHHHHH--HCCCeEEEEEE
Q 020307 289 LQNYNYLTEEEIEDLCT--SCGLTNYTSKV 316 (328)
Q Consensus 289 ~~~~~~~~~~~l~~ll~--~~Gf~~v~~~~ 316 (328)
....+++.++++ +.||..++...
T Consensus 167 -----~~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 167 -----HNQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp -----TSCHHHHHHHTGGGGGGTEECCEEE
T ss_pred -----CccHHHHHHHHHHhhcCCceEEEEE
Confidence 124567888999 99997766443
No 140
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.62 E-value=9e-15 Score=125.32 Aligned_cols=139 Identities=9% Similarity=0.043 Sum_probs=109.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++...++ ..++.+..+|..+...+++.||+|+..
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl--~~~I~~~~gD~l~~~~~~~~~D~Ivia 97 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL--TSKIDVRLANGLSAFEEADNIDTITIC 97 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECchhhccccccccCEEEEe
Confidence 357899999999999999999998777899999999999999999998875 567999999987765444479998876
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE---E
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK---V 316 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~---~ 316 (328)
+..-. -...+|.+..+.|+++|+|+++... ..+.++++|.+.||.+++.. .
T Consensus 98 GmGg~--lI~~IL~~~~~~l~~~~~lIlqp~~------------------------~~~~lr~~L~~~Gf~i~~E~lv~e 151 (230)
T 3lec_A 98 GMGGR--LIADILNNDIDKLQHVKTLVLQPNN------------------------REDDLRKWLAANDFEIVAEDILTE 151 (230)
T ss_dssp EECHH--HHHHHHHHTGGGGTTCCEEEEEESS------------------------CHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred CCchH--HHHHHHHHHHHHhCcCCEEEEECCC------------------------ChHHHHHHHHHCCCEEEEEEEEEE
Confidence 55331 1356788889999999999986621 35789999999999988864 2
Q ss_pred eCcE-EEEEEe
Q 020307 317 QQSF-IMFAAQ 326 (328)
Q Consensus 317 ~~~~-~~~~a~ 326 (328)
.+.| .++.+.
T Consensus 152 ~~~~Yeii~~~ 162 (230)
T 3lec_A 152 NDKRYEILVVK 162 (230)
T ss_dssp --CEEEEEEEE
T ss_pred CCEEEEEEEEE
Confidence 4444 344443
No 141
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.62 E-value=2.3e-15 Score=135.53 Aligned_cols=149 Identities=13% Similarity=0.121 Sum_probs=108.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCCCCC--CCCccce
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRLPF--ASGFVDA 235 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~lp~--~~~~fD~ 235 (328)
.++.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++... +. ..+++.++.+|+...+. .+++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSL-ADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhccc-CCCcEEEEECcHHHHHHhccCCceeE
Confidence 4568999999999999999998865679999999999999999987421 11 15689999999876543 3678999
Q ss_pred EEeccccccCCCh----HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeE
Q 020307 236 VHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 311 (328)
Q Consensus 236 i~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 311 (328)
|++.....+.+.. ..+++++.++|||||++++...+. +. .....+++.+.++++||..
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~------~~------------~~~~~~~~~~~l~~~GF~~ 234 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI------WL------------DLELIEKMSRFIRETGFAS 234 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT------TT------------CHHHHHHHHHHHHHHTCSE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc------cc------------chHHHHHHHHHHHhCCCCc
Confidence 9997665544333 588999999999999999976432 10 0113467888999999988
Q ss_pred EEEEE-------eCcEEEEEEeC
Q 020307 312 YTSKV-------QQSFIMFAAQK 327 (328)
Q Consensus 312 v~~~~-------~~~~~~~~a~k 327 (328)
++... .+.|..+.+.|
T Consensus 235 v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 235 VQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp EEEEECCCTTSTTSCCEEEEEES
T ss_pred EEEEEeecccccCcceEEEEEeC
Confidence 77543 23444555554
No 142
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.62 E-value=3.3e-15 Score=132.74 Aligned_cols=128 Identities=18% Similarity=0.225 Sum_probs=105.9
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|++++...++ ..++.++.+|+.+. +++++||+
T Consensus 108 ~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~-~~~~~~D~ 184 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL--IERVTIKVRDISEG-FDEKDVDA 184 (277)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC--GGGEEEECCCGGGC-CSCCSEEE
T ss_pred hCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHc-ccCCccCE
Confidence 45567889999999999999999998 6677999999999999999999887653 35799999999775 56678999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
|++ +.+++..+++++.++|+|||++++.++... ...++.+.+++.||..++.
T Consensus 185 V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~----------------------~~~~~~~~l~~~gf~~~~~ 236 (277)
T 1o54_A 185 LFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTTN----------------------QVQETLKKLQELPFIRIEV 236 (277)
T ss_dssp EEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSHH----------------------HHHHHHHHHHHSSEEEEEE
T ss_pred EEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------------HHHHHHHHHHHCCCceeEE
Confidence 997 457888999999999999999999885321 1245667788899987764
No 143
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.61 E-value=1.8e-15 Score=132.61 Aligned_cols=103 Identities=16% Similarity=0.246 Sum_probs=84.2
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-----CCC
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----ASG 231 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~~~ 231 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++... ++..++..++. .++
T Consensus 41 l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~~~~~~~~~ 109 (261)
T 3iv6_A 41 ENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR---------CVTIDLLDITAEIPKELAG 109 (261)
T ss_dssp TTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS---------CCEEEECCTTSCCCGGGTT
T ss_pred cCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc---------cceeeeeecccccccccCC
Confidence 5566788999999999999999999876 9999999999999999986431 23344443332 256
Q ss_pred ccceEEeccccccCCC--hHHHHHHHHhcccCCcEEEEEEec
Q 020307 232 FVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 232 ~fD~i~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+||+|++..+++|+.. ...+++++.++| |||+++++...
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 8999999999999864 457899999999 99999998754
No 144
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.61 E-value=4.7e-15 Score=135.61 Aligned_cols=106 Identities=23% Similarity=0.335 Sum_probs=92.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++..++ ..++.++.+|+.++++++++||+|
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~~~~~~~~D~I 135 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKL--EDTITLIKGKIEEVHLPVEKVDVI 135 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTSCCSCSCEEEE
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCC--CCcEEEEEeeHHHhcCCCCcEEEE
Confidence 344578899999999999999999985 45899999997 99999999887663 478999999999998888899999
Q ss_pred Eecc---ccccCCChHHHHHHHHhcccCCcEEE
Q 020307 237 HAGA---ALHCWPSPSNAVAEISRILRSGGVFV 266 (328)
Q Consensus 237 ~~~~---vl~h~~d~~~~l~~~~r~LkpgG~l~ 266 (328)
++.. .+.|..++..+++++.++|||||+++
T Consensus 136 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 9876 56676778889999999999999987
No 145
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=1e-14 Score=134.90 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=92.6
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+|..+|+|+|+|+.+++.+++++...++....++.++.+|+.+ ++++++||+|
T Consensus 218 l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~I 296 (375)
T 4dcm_A 218 LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAV 296 (375)
T ss_dssp CCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEE
T ss_pred CcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEE
Confidence 444566899999999999999999998778999999999999999999887653212368899999977 4567899999
Q ss_pred EeccccccCC---Ch--HHHHHHHHhcccCCcEEEEEEec
Q 020307 237 HAGAALHCWP---SP--SNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~---d~--~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+++..+++.. +. ..+++++.++|||||+++++...
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 9998887632 22 36899999999999999997743
No 146
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.60 E-value=1.9e-15 Score=138.87 Aligned_cols=115 Identities=13% Similarity=0.136 Sum_probs=93.8
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH-------hcCcCCCCCeEEEEecCCCCCCC
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIK-------QDNTILTSNLALVRADVCRLPFA 229 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-------~~~~~~~~~i~~~~~d~~~lp~~ 229 (328)
+...++.+|||||||+|.++..++...+..+++|+|+|+.+++.|+++.+ ..++. ..++.|+++|+.++|+.
T Consensus 169 l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi~GD~~~lp~~ 247 (438)
T 3uwp_A 169 IKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLERGDFLSEEWR 247 (438)
T ss_dssp HCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEEECCTTSHHHH
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEEECcccCCccc
Confidence 45678899999999999999999987544469999999999999987542 22320 25899999999998875
Q ss_pred C--CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccC
Q 020307 230 S--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 230 ~--~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 273 (328)
+ ..||+|+++..+ +.+++...|+++.++|||||+|++.+....
T Consensus 248 d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 248 ERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred cccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 4 479999998765 457888999999999999999999877654
No 147
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.60 E-value=7e-15 Score=136.20 Aligned_cols=105 Identities=18% Similarity=0.225 Sum_probs=92.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++...+ .++.++.+|+.+.+.++++||+|+++.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~~----~~v~~~~~D~~~~~~~~~~fD~Ii~np 306 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEANA----LKAQALHSDVDEALTEEARFDIIVTNP 306 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTTSCTTCCEEEEEECC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcC----CCeEEEEcchhhccccCCCeEEEEECC
Confidence 678999999999999999999865 99999999999999999988754 358999999988876678999999999
Q ss_pred cccc-----CCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 241 ALHC-----WPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 241 vl~h-----~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
.+++ ..+...+++++.++|||||+++++...
T Consensus 307 p~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 307 PFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred chhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 9888 445678999999999999999998743
No 148
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.60 E-value=6.6e-15 Score=135.13 Aligned_cols=107 Identities=15% Similarity=0.239 Sum_probs=92.3
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||||||+|.++..+++.+ ..+|+|+|+| .+++.|++++...++ ..++.++.+|+.++++++++||+|++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s-~~l~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECS-SISDYAVKIVKANKL--DHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECS-THHHHHHHHHHHTTC--TTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcH-HHHHHHHHHHHHcCC--CCcEEEEECcHHHccCCCCceEEEEE
Confidence 4578899999999999999999984 4599999999 499999999987764 45699999999999988899999998
Q ss_pred ccc---cccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 239 GAA---LHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 239 ~~v---l~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
..+ +.+..++..+++++.++|||||+++...
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 765 4455788999999999999999987543
No 149
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.59 E-value=8e-17 Score=140.05 Aligned_cols=142 Identities=14% Similarity=0.147 Sum_probs=111.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++...++ ..++.++++|+.+++ ++++||+|++.
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~-~~~~~D~v~~~ 151 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTGM--RVIAIDIDPVKIALARNNAEVYGI--ADKIEFICGDFLLLA-SFLKADVVFLS 151 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHG-GGCCCSEEEEC
T ss_pred cCCCEEEECccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC--CcCeEEEECChHHhc-ccCCCCEEEEC
Confidence 3688999999999999999999874 999999999999999999887653 258999999998776 56799999999
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
.+++|..++...+.++.++|+|||++++.......... ........+.+++..++...|...++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~~~~----------~~~lp~~~~~~~~~~~l~~~g~~~i~~~~ 218 (241)
T 3gdh_A 152 PPWGGPDYATAETFDIRTMMSPDGFEIFRLSKKITNNI----------VYFLPRNADIDQVASLAGPGGQVEIEQNF 218 (241)
T ss_dssp CCCSSGGGGGSSSBCTTTSCSSCHHHHHHHHHHHCSCE----------EEEEETTBCHHHHHHTTCTTCCEEEEEEE
T ss_pred CCcCCcchhhhHHHHHHhhcCCcceeHHHHHHhhCCce----------EEECCCCCCHHHHHHHhccCCCEEEEehh
Confidence 99999888877888999999999986654321110000 01223456778888888888876665433
No 150
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=2.3e-14 Score=126.16 Aligned_cols=112 Identities=14% Similarity=0.101 Sum_probs=90.7
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHh---cCcCCCCCeEEEEecCCCC-------
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ---DNTILTSNLALVRADVCRL------- 226 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~---~~~~~~~~i~~~~~d~~~l------- 226 (328)
+...++.+|||+|||+|.++..+++..+..+++|+|+++.+++.|++++.. .++ ..++.++.+|+.++
T Consensus 32 ~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l--~~~v~~~~~D~~~~~~~~~~~ 109 (260)
T 2ozv_A 32 VADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF--SARIEVLEADVTLRAKARVEA 109 (260)
T ss_dssp CCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT--GGGEEEEECCTTCCHHHHHHT
T ss_pred hcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC--cceEEEEeCCHHHHhhhhhhh
Confidence 444567899999999999999999998777999999999999999999876 543 34699999999876
Q ss_pred CCCCCccceEEecccccc------------------CCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 227 PFASGFVDAVHAGAALHC------------------WPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 227 p~~~~~fD~i~~~~vl~h------------------~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
++++++||+|+++-.... ..+...+++.+.++|||||++++..+
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 255789999999732211 12357889999999999999998663
No 151
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.59 E-value=8.6e-15 Score=127.78 Aligned_cols=103 Identities=19% Similarity=0.349 Sum_probs=87.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--------CcCCCCCeEEEEecCCC-CC--C
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--------NTILTSNLALVRADVCR-LP--F 228 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--------~~~~~~~i~~~~~d~~~-lp--~ 228 (328)
.++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.+++++... + ..++.++.+|+.+ ++ +
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~---~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG---FQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST---TTTEEEEECCTTSCGGGTS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC---CCcEEEEeccHHHHHHHhc
Confidence 3567999999999999999999988778999999999999999887653 3 4689999999976 66 6
Q ss_pred CCCccceEEeccccccCCCh-------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 229 ASGFVDAVHAGAALHCWPSP-------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 ~~~~fD~i~~~~vl~h~~d~-------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+.+++|.|++. +++| ..+++++.++|||||++++.+.
T Consensus 125 ~~~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 125 EKGQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp CTTCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cccccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 67889998843 4555 4799999999999999999763
No 152
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.59 E-value=2.7e-15 Score=137.02 Aligned_cols=111 Identities=18% Similarity=0.209 Sum_probs=87.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcC-------cC-CCCCeEEEEecCCCC-
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN-------TI-LTSNLALVRADVCRL- 226 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~-------~~-~~~~i~~~~~d~~~l- 226 (328)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.|++++...+ +. ...++.++.+|+.+.
T Consensus 101 l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 101 MDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp HTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence 45567889999999999999999997 666799999999999999999887521 00 035899999999876
Q ss_pred -CCCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 227 -PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 227 -p~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++++++||+|++. .+++..+++++.++|||||++++..+..
T Consensus 181 ~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 181 EDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp -------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred cccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 4567789999984 3566678999999999999999888653
No 153
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.58 E-value=1.7e-14 Score=124.65 Aligned_cols=127 Identities=7% Similarity=0.019 Sum_probs=103.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++...++ ..++.+..+|..+...++.+||+|+..
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~I~v~~gD~l~~~~~~~~~D~Ivia 97 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL--TEQIDVRKGNGLAVIEKKDAIDTIVIA 97 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEecchhhccCccccccEEEEe
Confidence 357899999999999999999998777899999999999999999998875 557999999987655433469999875
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
+..-. -...+|.+..+.|+++|+|++.... ..+.++++|.+.||.+++.
T Consensus 98 gmGg~--lI~~IL~~~~~~L~~~~~lIlq~~~------------------------~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 98 GMGGT--LIRTILEEGAAKLAGVTKLILQPNI------------------------AAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp EECHH--HHHHHHHHTGGGGTTCCEEEEEESS------------------------CHHHHHHHHHHHTEEEEEE
T ss_pred CCchH--HHHHHHHHHHHHhCCCCEEEEEcCC------------------------ChHHHHHHHHHCCCEEEEE
Confidence 54221 1356788899999999999987621 3568999999999998764
No 154
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=1.4e-14 Score=124.27 Aligned_cols=112 Identities=9% Similarity=0.173 Sum_probs=91.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCC-C----
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPF-A---- 229 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~-~---- 229 (328)
+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...++ ..++.++.+|+.+ ++. .
T Consensus 54 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~l~~~~~~~~ 131 (221)
T 3u81_A 54 IREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL--QDKVTILNGASQDLIPQLKKKYD 131 (221)
T ss_dssp HHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHGGGTTTTSC
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCceEEEECCHHHHHHHHHHhcC
Confidence 344577899999999999999999863 366999999999999999999987764 4579999999744 332 2
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
.++||+|++....++..+...+++.+ ++|||||++++.+..
T Consensus 132 ~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 132 VDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred CCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 26899999998888876666778888 999999999986543
No 155
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=1.1e-14 Score=124.17 Aligned_cols=107 Identities=15% Similarity=0.097 Sum_probs=89.8
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++.+ +..+|+++|+|+.+++.+++++...+ ..++.+..+|+......+++||+
T Consensus 73 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~fD~ 149 (215)
T 2yxe_A 73 LDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG---YDNVIVIVGDGTLGYEPLAPYDR 149 (215)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEESCGGGCCGGGCCEEE
T ss_pred hCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEECCcccCCCCCCCeeE
Confidence 445578899999999999999999885 44699999999999999999987765 45799999998543223678999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
|++..+++|++ +++.++|||||++++..+..
T Consensus 150 v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 150 IYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred EEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 99999999986 48899999999999988654
No 156
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.58 E-value=8.6e-15 Score=132.65 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=91.2
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
+...++.+|||||||+|.++..+++.++ ..+|+|+|+|+.+++.|++++...+ ..++.++.+|+.+.+..+++||+
T Consensus 71 l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g---~~~v~~~~~d~~~~~~~~~~fD~ 147 (317)
T 1dl5_A 71 VGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG---IENVIFVCGDGYYGVPEFSPYDV 147 (317)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGCCGGGCCEEE
T ss_pred cCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCeEEEECChhhccccCCCeEE
Confidence 4456788999999999999999999866 3569999999999999999988765 45699999999875545678999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
|++..+++|++ +++.++|||||++++....
T Consensus 148 Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 148 IFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred EEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 99999999986 5788999999999997644
No 157
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.58 E-value=1.4e-14 Score=124.87 Aligned_cols=104 Identities=16% Similarity=0.175 Sum_probs=88.5
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... .++.++.+|+......+++||+|
T Consensus 66 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 66 LDLHKGQKVLEIGTGIGYYTALIAEIVD--KVVSVEINEKMYNYASKLLSYY-----NNIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTC-----SSEEEEESCGGGCCGGGCCEEEE
T ss_pred cCCCCCCEEEEEcCCCCHHHHHHHHHcC--EEEEEeCCHHHHHHHHHHHhhc-----CCeEEEECCcccccccCCCccEE
Confidence 4455788999999999999999999874 9999999999999999987653 28999999997633346789999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccC
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 273 (328)
++..+++|++ .++.++|||||++++.++...
T Consensus 139 ~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 139 VVWATAPTLL------CKPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp EESSBBSSCC------HHHHHTEEEEEEEEEEECSSS
T ss_pred EECCcHHHHH------HHHHHHcCCCcEEEEEEcCCC
Confidence 9999999986 368899999999999987543
No 158
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.57 E-value=1.2e-14 Score=128.97 Aligned_cols=108 Identities=19% Similarity=0.262 Sum_probs=93.7
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhc-C-cCCCCCeEEEEecCCCCCCCCCcc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-N-TILTSNLALVRADVCRLPFASGFV 233 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~-~-~~~~~~i~~~~~d~~~lp~~~~~f 233 (328)
+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|++++... + + ..++.++.+|+.+.++++++|
T Consensus 95 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~--~~~v~~~~~d~~~~~~~~~~~ 172 (280)
T 1i9g_A 95 GDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP--PDNWRLVVSDLADSELPDGSV 172 (280)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC--CTTEEEECSCGGGCCCCTTCE
T ss_pred cCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC--CCcEEEEECchHhcCCCCCce
Confidence 45567889999999999999999985 55679999999999999999998764 2 2 358999999998888778899
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
|+|++ +++++..+++++.++|||||++++.++.
T Consensus 173 D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 173 DRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp EEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred eEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 99998 5678889999999999999999998864
No 159
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.57 E-value=5.9e-15 Score=124.87 Aligned_cols=108 Identities=11% Similarity=0.088 Sum_probs=89.0
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCC-CCeEEEEecCCCCCC--CCCc-cceE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCRLPF--ASGF-VDAV 236 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~lp~--~~~~-fD~i 236 (328)
++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|++++...++ . .++.++.+|+.++.. .+++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKC--SSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTC--CTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCC--CccceEEEECCHHHHHHhhccCCCCCEE
Confidence 57899999999999999877775 35899999999999999999887652 1 589999999866432 3578 9999
Q ss_pred EeccccccCCChHHHHHHH--HhcccCCcEEEEEEecc
Q 020307 237 HAGAALHCWPSPSNAVAEI--SRILRSGGVFVGTTFLR 272 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~--~r~LkpgG~l~i~~~~~ 272 (328)
++...+ |..+...+++.+ .++|||||++++.....
T Consensus 130 ~~~~~~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 130 FLDPPF-HFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EECCCS-SSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EECCCC-CCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 998874 466777889999 67899999999988653
No 160
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.57 E-value=7.8e-15 Score=129.66 Aligned_cols=108 Identities=12% Similarity=0.186 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCcCH----HHHHHHHhCC----CceEEEEeCCHHHHHHHHHHHHh-----------------------cC
Q 020307 161 QGGLLVDVSCGSGL----FSRKFAKSGT----YSGVVALDFSENMLRQCYDFIKQ-----------------------DN 209 (328)
Q Consensus 161 ~~~~vLDiGcG~G~----~~~~l~~~~~----~~~v~g~D~s~~~~~~a~~~~~~-----------------------~~ 209 (328)
++.+|||+|||+|. ++..|++..+ +.+|+|+|+|+.+++.|++..-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999998 5555666522 35899999999999999986410 00
Q ss_pred -c----CCCCCeEEEEecCCCCCCC-CCccceEEeccccccCCCh--HHHHHHHHhcccCCcEEEEE
Q 020307 210 -T----ILTSNLALVRADVCRLPFA-SGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGT 268 (328)
Q Consensus 210 -~----~~~~~i~~~~~d~~~lp~~-~~~fD~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~ 268 (328)
. ....++.|.++|+.+.|++ .++||+|+|.+|++|+.++ .++++++.+.|||||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0 0013689999999886665 5789999999999999776 68999999999999999983
No 161
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.57 E-value=4.6e-14 Score=120.72 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=105.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCC-CCCCCCCccceEEe
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC-RLPFASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~-~lp~~~~~fD~i~~ 238 (328)
.++.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++...++ ..++.+..+|.. .++. ...||+|+.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~i~~~~~d~l~~l~~-~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL--KEKIQVRLANGLAAFEE-TDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECchhhhccc-CcCCCEEEE
Confidence 357799999999999999999998877899999999999999999998875 457999999984 4432 226999987
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE---
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK--- 315 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~--- 315 (328)
.+.--. -...+|.+....|+|+|++++... ...+.++++|.+.||.+++..
T Consensus 91 aG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~~------------------------~~~~~vr~~L~~~Gf~i~~e~lv~ 144 (225)
T 3kr9_A 91 AGMGGR--LIARILEEGLGKLANVERLILQPN------------------------NREDDLRIWLQDHGFQIVAESILE 144 (225)
T ss_dssp EEECHH--HHHHHHHHTGGGCTTCCEEEEEES------------------------SCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCChH--HHHHHHHHHHHHhCCCCEEEEECC------------------------CCHHHHHHHHHHCCCEEEEEEEEE
Confidence 654221 135788999999999999988552 145689999999999988863
Q ss_pred EeCcEE
Q 020307 316 VQQSFI 321 (328)
Q Consensus 316 ~~~~~~ 321 (328)
..+.|+
T Consensus 145 e~~~~Y 150 (225)
T 3kr9_A 145 EAGKFY 150 (225)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 345553
No 162
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.56 E-value=3.9e-14 Score=126.09 Aligned_cols=138 Identities=17% Similarity=0.110 Sum_probs=99.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeC-CHHHHHHHHHHH-----HhcCcC--CCCCeEEEEecCCCCC--C-
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF-SENMLRQCYDFI-----KQDNTI--LTSNLALVRADVCRLP--F- 228 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~-----~~~~~~--~~~~i~~~~~d~~~lp--~- 228 (328)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+ |+.+++.+++++ ...++. ...++.+...|..+.. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 467899999999999999999875 348999999 899999999988 333210 0036778766654321 1
Q ss_pred ---CCCccceEEeccccccCCChHHHHHHHHhccc---C--CcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHH
Q 020307 229 ---ASGFVDAVHAGAALHCWPSPSNAVAEISRILR---S--GGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEI 300 (328)
Q Consensus 229 ---~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~Lk---p--gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (328)
.+++||+|++..+++|.++...+++.+.++|| | ||++++...... +. + .....++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~----~~----~---------~~~~~~~ 219 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHR----PH----L---------AERDLAF 219 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-------------------------CTHH
T ss_pred hhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee----cc----c---------chhHHHH
Confidence 35789999999999999999999999999999 9 998877542211 00 0 0112466
Q ss_pred HHHHHHCC-CeEEEEE
Q 020307 301 EDLCTSCG-LTNYTSK 315 (328)
Q Consensus 301 ~~ll~~~G-f~~v~~~ 315 (328)
.+.+++.| |++.+..
T Consensus 220 ~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 220 FRLVNADGALIAEPWL 235 (281)
T ss_dssp HHHHHHSTTEEEEEEE
T ss_pred HHHHHhcCCEEEEEec
Confidence 77889999 9887753
No 163
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.56 E-value=8.5e-15 Score=128.28 Aligned_cols=147 Identities=11% Similarity=0.043 Sum_probs=98.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC---CCC---CCccc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---PFA---SGFVD 234 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l---p~~---~~~fD 234 (328)
++.+|||+|||+|.++..++...+..+|+|+|+|+.+++.|++++...++ ..++.++.+|+.+. +++ +++||
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL--SDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC--CccEEEEEcchhhhhhhhhhcccCCccc
Confidence 56799999999999999988875456999999999999999999987663 34699999997652 344 26899
Q ss_pred eEEeccccccCC--------------Ch-HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHh---hhccCCCCC
Q 020307 235 AVHAGAALHCWP--------------SP-SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER---ILQNYNYLT 296 (328)
Q Consensus 235 ~i~~~~vl~h~~--------------d~-~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 296 (328)
+|+++-..++.. .| ..++.++.++|||||.+.+...... ......... ...+....+
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~-----~~~~~l~~~g~~~~~~~~~~~ 217 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIH-----DSLQLKKRLRWYSCMLGKKCS 217 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHH-----HHHHHGGGBSCEEEEESSTTS
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHH-----HHHhcccceEEEEECCCChhH
Confidence 999985544332 11 2457889999999998876542100 000000000 001222334
Q ss_pred HHHHHHHHHHCCCeEEEE
Q 020307 297 EEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 297 ~~~l~~ll~~~Gf~~v~~ 314 (328)
.+++.++++++||+.++.
T Consensus 218 ~~~~~~~l~~~Gf~~v~~ 235 (254)
T 2h00_A 218 LAPLKEELRIQGVPKVTY 235 (254)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCceEE
Confidence 478999999999987764
No 164
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.56 E-value=2.4e-14 Score=129.57 Aligned_cols=113 Identities=18% Similarity=0.200 Sum_probs=91.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
+...++.+|||+|||+|..+..+++.. ...+|+|+|+|+.+++.+++++...+ ..++.++++|+..++..+++||+
T Consensus 114 l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g---~~~v~~~~~D~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 114 LDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG---VLNVILFHSSSLHIGELNVEFDK 190 (315)
T ss_dssp HCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT---CCSEEEESSCGGGGGGGCCCEEE
T ss_pred hCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC---CCeEEEEECChhhcccccccCCE
Confidence 556678899999999999999999874 34689999999999999999998776 45799999999887655678999
Q ss_pred EEec------cccccCCCh----------------HHHHHHHHhcccCCcEEEEEEecc
Q 020307 236 VHAG------AALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 236 i~~~------~vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
|++. .++.+.++. ..+|+++.++|||||++++++...
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 9984 334443321 478999999999999999988543
No 165
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.56 E-value=1.3e-14 Score=132.92 Aligned_cols=107 Identities=19% Similarity=0.263 Sum_probs=91.3
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.+++++...+ ..+.++.+|+...+ +++||+|++
T Consensus 194 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~----~~~~~~~~d~~~~~--~~~fD~Iv~ 267 (343)
T 2pjd_A 194 PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG----VEGEVFASNVFSEV--KGRFDMIIS 267 (343)
T ss_dssp TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTTC--CSCEEEEEE
T ss_pred cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCCEEEEccccccc--cCCeeEEEE
Confidence 345679999999999999999999877799999999999999999988754 24677889987654 678999999
Q ss_pred cccccc-----CCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 239 GAALHC-----WPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 239 ~~vl~h-----~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+.++|+ ..+...+++++.++|||||.+++..+.
T Consensus 268 ~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 268 NPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 998875 334578999999999999999998864
No 166
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.56 E-value=1.2e-14 Score=125.68 Aligned_cols=110 Identities=12% Similarity=0.183 Sum_probs=92.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-CCCCccc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-FASGFVD 234 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-~~~~~fD 234 (328)
+...++.+|||+|||+|..+..+++..+..+|+++|+++.+++.|++++...++ ..++.++.+|+.+. + ..+++||
T Consensus 67 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~fD 144 (232)
T 3ntv_A 67 IRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF--ENQVRIIEGNALEQFENVNDKVYD 144 (232)
T ss_dssp HHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCGGGCHHHHTTSCEE
T ss_pred HhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHHHHhhccCCcc
Confidence 344578899999999999999999976677999999999999999999988764 45899999999664 3 3367999
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 235 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+|++... ..+...+++++.++|||||++++....
T Consensus 145 ~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 145 MIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp EEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred EEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 9997654 445678999999999999999885543
No 167
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.56 E-value=3.4e-14 Score=116.60 Aligned_cols=100 Identities=21% Similarity=0.251 Sum_probs=86.2
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------CC
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------FA 229 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------~~ 229 (328)
..++.+|||+|||+|.++..+++. ++..+++|+|+++ +++ ..++.++.+|+.+.+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccccchhhhhhhccCC
Confidence 346789999999999999999988 5567999999998 642 347899999998876 67
Q ss_pred CCccceEEeccccccCCCh-----------HHHHHHHHhcccCCcEEEEEEecc
Q 020307 230 SGFVDAVHAGAALHCWPSP-----------SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~-----------~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
+++||+|++..++++..++ ..+++++.++|||||.+++.++..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 7899999999999888877 688999999999999999988654
No 168
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.56 E-value=1.9e-14 Score=133.35 Aligned_cols=109 Identities=18% Similarity=0.240 Sum_probs=92.2
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
...++.+|||||||+|.++..+++.+ ..+|+|+|+| .+++.|+++++..++ ..++.++.+|+.+++++ ++||+|+
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~-~~~D~Iv 134 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNL--DHIVEVIEGSVEDISLP-EKVDVII 134 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTC--TTTEEEEESCGGGCCCS-SCEEEEE
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCC--CCeEEEEECchhhcCcC-CcceEEE
Confidence 34578899999999999999999986 3489999999 999999999988764 46699999999998876 7899999
Q ss_pred eccccccC---CChHHHHHHHHhcccCCcEEEEEEec
Q 020307 238 AGAALHCW---PSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 238 ~~~vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+..+.+++ .++..+++++.++|||||++++....
T Consensus 135 ~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 135 SEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp ECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred EcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 96644444 56788999999999999999876544
No 169
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.55 E-value=2.9e-14 Score=129.78 Aligned_cols=106 Identities=19% Similarity=0.311 Sum_probs=90.7
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
...++.+|||+|||+|.++..+++.+ ..+|+|+|+| .+++.|++++...++ ..++.++.+|+.++++++++||+|+
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~~--~~~i~~~~~d~~~~~~~~~~~D~Iv 110 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNGF--SDKITLLRGKLEDVHLPFPKVDIII 110 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTTC--TTTEEEEESCTTTSCCSSSCEEEEE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcCC--CCCEEEEECchhhccCCCCcccEEE
Confidence 34567899999999999999999885 4589999999 599999999887664 4679999999999888778999999
Q ss_pred ecc---ccccCCChHHHHHHHHhcccCCcEEEE
Q 020307 238 AGA---ALHCWPSPSNAVAEISRILRSGGVFVG 267 (328)
Q Consensus 238 ~~~---vl~h~~d~~~~l~~~~r~LkpgG~l~i 267 (328)
+.. .+.+..++..+++++.++|||||+++.
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 874 455666788999999999999999974
No 170
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.55 E-value=2.1e-14 Score=121.51 Aligned_cols=107 Identities=10% Similarity=0.077 Sum_probs=89.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCCCCCccceEEec
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASGFVDAVHAG 239 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~~~~fD~i~~~ 239 (328)
++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|++++...+ ..++.++++|+.+ ++...++||+|++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLK---AGNARVVNSNAMSFLAQKGTPHNIVFVD 129 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSCHHHHHSSCCCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEECCHHHHHhhcCCCCCEEEEC
Confidence 57899999999999999887775 2489999999999999999988765 3589999999866 45556789999998
Q ss_pred cccccCCChHHHHHHHHh--cccCCcEEEEEEecc
Q 020307 240 AALHCWPSPSNAVAEISR--ILRSGGVFVGTTFLR 272 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r--~LkpgG~l~i~~~~~ 272 (328)
.. .|..+...+++.+.+ +|||||++++.....
T Consensus 130 ~p-~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 130 PP-FRRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp CS-SSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CC-CCCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 76 346677888888866 599999999988653
No 171
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.55 E-value=7.7e-15 Score=121.23 Aligned_cols=110 Identities=17% Similarity=0.205 Sum_probs=88.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCCCCCccceEEe
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~~~~fD~i~~ 238 (328)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++...++ ..++.++.+|+.+ ++..+++||+|++
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~i~~ 106 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMTKA--ENRFTLLKMEAERAIDCLTGRFDLVFL 106 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTTTC--GGGEEEECSCHHHHHHHBCSCEEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcHHHhHHhhcCCCCEEEE
Confidence 467899999999999999999884 45999999999999999999887653 3479999999876 3434567999999
Q ss_pred ccccccCCChHHHHHHHH--hcccCCcEEEEEEeccC
Q 020307 239 GAALHCWPSPSNAVAEIS--RILRSGGVFVGTTFLRY 273 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~--r~LkpgG~l~i~~~~~~ 273 (328)
...++ ..+....++.+. ++|||||++++......
T Consensus 107 ~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 107 DPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 86643 234456777777 99999999999886543
No 172
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.54 E-value=2.3e-14 Score=124.10 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=88.8
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC-Cccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-GFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++.++ .+|+++|+++.+++.|++++...+ ..++.+..+|+ ..++++ ..||+
T Consensus 87 l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~-~~~~~~~~~fD~ 161 (235)
T 1jg1_A 87 ANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG---VKNVHVILGDG-SKGFPPKAPYDV 161 (235)
T ss_dssp HTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCG-GGCCGGGCCEEE
T ss_pred cCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC---CCCcEEEECCc-ccCCCCCCCccE
Confidence 4455788999999999999999999874 699999999999999999988765 45699999997 334444 35999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccC
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 273 (328)
|++..++++++ +++.++|||||++++..+...
T Consensus 162 Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 162 IIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp EEECSBBSSCC------HHHHHTEEEEEEEEEEECSSS
T ss_pred EEECCcHHHHH------HHHHHhcCCCcEEEEEEecCC
Confidence 99999999886 378899999999999887643
No 173
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.54 E-value=7.3e-15 Score=120.31 Aligned_cols=105 Identities=15% Similarity=0.185 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-C--CCCccceE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-F--ASGFVDAV 236 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-~--~~~~fD~i 236 (328)
++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.+++++...+ . ++.++.+|+.+. + . ..++||+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTG---L-GARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHT---C-CCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcC---C-ceEEEeccHHHHHHhhhccCCceEEE
Confidence 678999999999999999999987 69999999999999999988754 3 789999998663 2 1 12479999
Q ss_pred EeccccccCCChHHHHHHHH--hcccCCcEEEEEEeccC
Q 020307 237 HAGAALHCWPSPSNAVAEIS--RILRSGGVFVGTTFLRY 273 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~--r~LkpgG~l~i~~~~~~ 273 (328)
++..+++ .+....++.+. ++|||||++++.++...
T Consensus 115 ~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 115 FMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp EECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred EECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 9987765 56667777777 99999999999887654
No 174
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.54 E-value=1.4e-14 Score=120.51 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=89.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----CCCCccce
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 235 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 235 (328)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++...++ ..++.++.+|+.+.. +.+++||+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKE--PEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCC--CcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 367899999999999999888864 45899999999999999999887653 357999999986632 23678999
Q ss_pred EEeccccccCCChHHHHHHH--HhcccCCcEEEEEEeccC
Q 020307 236 VHAGAALHCWPSPSNAVAEI--SRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~--~r~LkpgG~l~i~~~~~~ 273 (328)
|++...++ ..+....++.+ .++|||||++++..+...
T Consensus 120 i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 120 VLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp EEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 99987743 45677778888 899999999999887643
No 175
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.54 E-value=9.1e-15 Score=129.76 Aligned_cols=142 Identities=13% Similarity=0.179 Sum_probs=95.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEE-EecCCCCC---CCCCccceE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV-RADVCRLP---FASGFVDAV 236 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~-~~d~~~lp---~~~~~fD~i 236 (328)
++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.|++.+.+. .+++... ..++..++ ++..+||+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~--------~~rv~~~~~~ni~~l~~~~l~~~~fD~v 155 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQ--------DDRVRSMEQYNFRYAEPVDFTEGLPSFA 155 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHT--------CTTEEEECSCCGGGCCGGGCTTCCCSEE
T ss_pred cccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh--------CcccceecccCceecchhhCCCCCCCEE
Confidence 57799999999999999999885 35899999999999885442 3344332 23443332 234569999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHh-hhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER-ILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
++..++++ ...+|.++.++|||||.+++..-.........+.+ ... .....+....+++.++++++||.+....
T Consensus 156 ~~d~sf~s---l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~--~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 156 SIDVSFIS---LNLILPALAKILVDGGQVVALVKPQFEAGREQIGK--NGIVRESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp EECCSSSC---GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC---CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EEEeeHhh---HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCC--CCccCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 99887764 47889999999999999988742111000001000 000 0011223467889999999999988754
Q ss_pred E
Q 020307 316 V 316 (328)
Q Consensus 316 ~ 316 (328)
.
T Consensus 231 ~ 231 (291)
T 3hp7_A 231 F 231 (291)
T ss_dssp E
T ss_pred E
Confidence 4
No 176
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.53 E-value=5.5e-14 Score=128.96 Aligned_cols=149 Identities=15% Similarity=0.162 Sum_probs=107.6
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++..++ ..++.++.+|+.+++++ ++||+|
T Consensus 46 l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~l--~~~v~~~~~d~~~~~~~-~~~D~I 120 (348)
T 2y1w_A 46 HTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEVSLP-EQVDII 120 (348)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-SCEEEE
T ss_pred cccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcCC--CCcEEEEEcchhhCCCC-CceeEE
Confidence 444578899999999999999999874 45899999996 88999998887664 46899999999988765 579999
Q ss_pred EeccccccCCC--hHHHHHHHHhcccCCcEEEEEEeccCCC-C--cchhhHHHHHh---hhccCCCCCHHHHHHHHHHCC
Q 020307 237 HAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTS-S--TSLTGRVLRER---ILQNYNYLTEEEIEDLCTSCG 308 (328)
Q Consensus 237 ~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~-~--~~~~~~~~~~~---~~~~~~~~~~~~l~~ll~~~G 308 (328)
++..+++|+.+ ....+.++.++|||||++++...+.... . .....+.+... .......++...+..++.+.|
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~~~~~ 200 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEY 200 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHHHHHH
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhccccCcccccccCcccHHHhhhHHHhhh
Confidence 99999888854 4578889999999999998755432210 0 01111111111 112334555667777777776
Q ss_pred Ce
Q 020307 309 LT 310 (328)
Q Consensus 309 f~ 310 (328)
|.
T Consensus 201 f~ 202 (348)
T 2y1w_A 201 FR 202 (348)
T ss_dssp HT
T ss_pred cc
Confidence 64
No 177
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.53 E-value=8e-15 Score=142.99 Aligned_cols=108 Identities=16% Similarity=0.231 Sum_probs=92.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC--CCCCCccceEEe
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHA 238 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~i~~ 238 (328)
++.+|||||||.|.++..|++.|. +|+|+|+++.+++.|+..+.+.+ ..++.+.+++++++ ++.+++||+|+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENP---DFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTST---TSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcC---CCceEEEECCHHHHhhhccCCCccEEEE
Confidence 567999999999999999999987 99999999999999999988764 35799999999887 456789999999
Q ss_pred ccccccCCChH--HHHHHHHhcccCCcEEEEEEeccC
Q 020307 239 GAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 239 ~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~ 273 (328)
..+|||++||. ..+..+.+.|+++|..++......
T Consensus 141 ~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~ 177 (569)
T 4azs_A 141 LSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVK 177 (569)
T ss_dssp ESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCT
T ss_pred CcchhcCCCHHHHHHHHHHHHHhccccceeeEEeccc
Confidence 99999999986 335678888999988887775543
No 178
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.53 E-value=2.7e-14 Score=123.47 Aligned_cols=110 Identities=17% Similarity=0.227 Sum_probs=93.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-CCC--CCcc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFA--SGFV 233 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~--~~~f 233 (328)
+...++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|++++...+. ..++.++.+|+... +.. +++|
T Consensus 50 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~f 127 (233)
T 2gpy_A 50 LKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL--ESRIELLFGDALQLGEKLELYPLF 127 (233)
T ss_dssp HHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCGGGSHHHHTTSCCE
T ss_pred HhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHHHHhcccCCCc
Confidence 445578899999999999999999987667999999999999999999887663 45799999998764 432 5789
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
|+|++....+ +...+++++.++|||||++++.+..
T Consensus 128 D~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 128 DVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp EEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred cEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 9999987754 6789999999999999999997543
No 179
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.53 E-value=2.9e-14 Score=124.57 Aligned_cols=110 Identities=13% Similarity=0.164 Sum_probs=90.7
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCCC--CCcc
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFA--SGFV 233 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~--~~~f 233 (328)
...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...++ ..++.++.+|+.+ ++.. .++|
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV--DQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHTCCSCCCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHhcCCCCCe
Confidence 445788999999999999999999865 67999999999999999999988764 4589999999865 3322 3489
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
|+|++... ..+...+++++.++|||||++++.+...
T Consensus 138 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 138 DLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp SEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 99998653 3355788999999999999999876543
No 180
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.53 E-value=1.5e-15 Score=131.33 Aligned_cols=143 Identities=16% Similarity=0.114 Sum_probs=87.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEE-ecCCCCCCCCCccceEEec
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR-ADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~-~d~~~lp~~~~~fD~i~~~ 239 (328)
++.+|||||||+|.++..+++.+ ..+|+|+|+|+.|++.++++..........++.+.. .|+.. ..||.+.+.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~~~D 110 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ-----GRPSFTSID 110 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS-----CCCSEEEEC
T ss_pred CCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc-----CCCCEEEEE
Confidence 56799999999999999999985 248999999999999887642210000001122222 22221 123444444
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHh-h--hccCCCCCHHHHHHHHHHCCCeEEEEEE
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER-I--LQNYNYLTEEEIEDLCTSCGLTNYTSKV 316 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 316 (328)
.++.++ ..+++++.++|||||++++..... .......+... . ..+.+..+.+++.++++++||+++....
T Consensus 111 ~v~~~l---~~~l~~i~rvLkpgG~lv~~~~p~----~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 111 VSFISL---DLILPPLYEILEKNGEVAALIKPQ----FEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp CSSSCG---GGTHHHHHHHSCTTCEEEEEECHH----HHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred EEhhhH---HHHHHHHHHhccCCCEEEEEECcc----cccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 333332 678999999999999999864110 00000111000 0 0112234788999999999999887543
No 181
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.52 E-value=1.5e-13 Score=126.40 Aligned_cols=131 Identities=21% Similarity=0.125 Sum_probs=104.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
....++.+|||+|||+|.++..++..+ +..+++|+|+|+.+++.|++++...++ .++.+.++|+.+++.+.+.||+
T Consensus 199 ~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~---~~i~~~~~D~~~~~~~~~~~D~ 275 (354)
T 3tma_A 199 ADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL---SWIRFLRADARHLPRFFPEVDR 275 (354)
T ss_dssp TTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC---TTCEEEECCGGGGGGTCCCCSE
T ss_pred hCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC---CceEEEeCChhhCccccCCCCE
Confidence 344577899999999999999999976 667999999999999999999998764 3899999999998877778999
Q ss_pred EEeccccccCCC--------hHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHC
Q 020307 236 VHAGAALHCWPS--------PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSC 307 (328)
Q Consensus 236 i~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 307 (328)
|+++-....... ...+++++.++|||||++++.+++ .+.++++++ .
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~-------------------------~~~~~~~~~-~ 329 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR-------------------------PALLKRALP-P 329 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC-------------------------HHHHHHHCC-T
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC-------------------------HHHHHHHhh-c
Confidence 999644322111 257899999999999999998853 234555666 8
Q ss_pred CCeEEEEEE
Q 020307 308 GLTNYTSKV 316 (328)
Q Consensus 308 Gf~~v~~~~ 316 (328)
||+..+...
T Consensus 330 g~~~~~~~~ 338 (354)
T 3tma_A 330 GFALRHARV 338 (354)
T ss_dssp TEEEEEEEE
T ss_pred CcEEEEEEE
Confidence 998776543
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.52 E-value=3.9e-14 Score=132.42 Aligned_cols=116 Identities=12% Similarity=0.041 Sum_probs=91.1
Q ss_pred hhccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHH-------HHHHHhcCcCCCCCeEEEEecCCCC-
Q 020307 155 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQC-------YDFIKQDNTILTSNLALVRADVCRL- 226 (328)
Q Consensus 155 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a-------~~~~~~~~~~~~~~i~~~~~d~~~l- 226 (328)
+.+...++.+|||+|||+|.++..+++..+..+|+|+|+++.+++.| ++++...++. ..++.++.+|....
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~gD~~~~~ 314 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSLKKSFVDN 314 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEESSCSTTC
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEEcCccccc
Confidence 33455678899999999999999999975455899999999999988 7777765420 25899998764322
Q ss_pred -CC--CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 227 -PF--ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 227 -p~--~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++ ..++||+|+++.++ +.+++...|+++.++|||||++++.++..
T Consensus 315 ~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 315 NRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp HHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred cccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 22 24689999998776 45677888999999999999999986544
No 183
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=2.6e-14 Score=122.58 Aligned_cols=110 Identities=15% Similarity=0.127 Sum_probs=89.6
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-CC---CC
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-FA---SG 231 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-~~---~~ 231 (328)
...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...++ ..++.++.+|+.+. + +. .+
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL--NDRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHHTTCC
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 445788999999999999999999865 57999999999999999999987764 45699999998543 2 11 26
Q ss_pred ccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 232 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 232 ~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
+||+|++..... +...+++++.++|||||++++.+...
T Consensus 133 ~fD~v~~d~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 133 PFDFIFIDADKQ---NNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp CCSEEEECSCGG---GHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred CcCEEEEcCCcH---HHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 799999876533 45688999999999999888876543
No 184
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.51 E-value=1.4e-13 Score=119.76 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=90.8
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++. ..+++++|+++.+++.|+++....++ ..++.+..+|+.+..+++++||+|
T Consensus 87 ~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~D~v 162 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL--GKNVKFFNVDFKDAEVPEGIFHAA 162 (248)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC--CTTEEEECSCTTTSCCCTTCBSEE
T ss_pred cCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC--CCcEEEEEcChhhcccCCCcccEE
Confidence 34457889999999999999999998 44999999999999999999877653 368999999998754356789999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
++ +.+++..+++++.++|||||++++..+.
T Consensus 163 ~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 163 FV-----DVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp EE-----CSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred EE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 97 4568889999999999999999998864
No 185
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.50 E-value=1.4e-13 Score=118.19 Aligned_cols=107 Identities=22% Similarity=0.322 Sum_probs=88.5
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCc--CCCCCeEEEEecCCCCCCCCCccce
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~--~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
..++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.+++++...+. ....++.++.+|+...+..+++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 456789999999999999999987 4556999999999999999998876421 0024799999999766555778999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
|++..+++++ ++++.++|||||++++....
T Consensus 155 i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVV------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHH------HHHHHHhcCCCcEEEEEEec
Confidence 9999998876 36889999999999998754
No 186
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.50 E-value=8.3e-14 Score=118.40 Aligned_cols=106 Identities=16% Similarity=0.184 Sum_probs=88.1
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-CCCCCccceE
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVDAV 236 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD~i 236 (328)
..++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.|++++...++ ..++.++.+|+.+. +..++ ||+|
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~-fD~v 130 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL--IDRVELQVGDPLGIAAGQRD-IDIL 130 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG--GGGEEEEESCHHHHHTTCCS-EEEE
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CceEEEEEecHHHHhccCCC-CCEE
Confidence 34678999999999999999998855 67999999999999999999887654 45799999998653 44446 9999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
++... ..+...+++++.++|||||++++.+.
T Consensus 131 ~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 131 FMDCD---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EEETT---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EEcCC---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 98743 35678999999999999999998654
No 187
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.49 E-value=5.5e-14 Score=120.69 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=86.5
Q ss_pred CCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCC-CCeEEEEecCCCC-C-CCCCccceEE
Q 020307 162 GGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCRL-P-FASGFVDAVH 237 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~l-p-~~~~~fD~i~ 237 (328)
+.+|||||||+|..+..+++.. ++.+|+++|+++.+++.|+++++..++ . .++.++.+|+.+. + +.+++||+|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY--SPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 3499999999999999999874 367999999999999999999988764 4 5899999998553 2 3368999999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 238 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 238 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+.... .+...+++++.++|||||++++.+.
T Consensus 135 ~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 135 GQVSP---MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp ECCCT---TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred EcCcH---HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 87543 3567789999999999999999553
No 188
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=3.6e-14 Score=123.13 Aligned_cols=124 Identities=13% Similarity=0.066 Sum_probs=95.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHh----CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC---CCCC-C
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKS----GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---PFAS-G 231 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l---p~~~-~ 231 (328)
.++.+|||||||+|..+..+++. ++..+|+|+|+|+.+++.|+.. ..++.++++|+.+. +... .
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~--------~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD--------MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG--------CTTEEEEECCSSCSGGGGGGSSS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc--------CCceEEEECcchhHHHHHhhccC
Confidence 45679999999999999999987 5667999999999999888621 46899999999874 5433 4
Q ss_pred ccceEEeccccccCCChHHHHHHHHh-cccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHC--C
Q 020307 232 FVDAVHAGAALHCWPSPSNAVAEISR-ILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSC--G 308 (328)
Q Consensus 232 ~fD~i~~~~vl~h~~d~~~~l~~~~r-~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~--G 308 (328)
+||+|++... | .+...+++++.+ +|||||++++.+.. +. .. .++.+.+.+++++. +
T Consensus 152 ~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~~------~~-----~~-------~~~~~~~~~~l~~~~~~ 210 (236)
T 2bm8_A 152 AHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDMI------PY-----WY-------RYAPQLFSEYLGAFRDV 210 (236)
T ss_dssp CSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSCH------HH-----HH-------HHCHHHHHHHHHTTTTT
T ss_pred CCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeCc------cc-----cc-------ccCHHHHHHHHHhCccc
Confidence 7999998765 4 377889999997 99999999997641 11 00 02344788888888 5
Q ss_pred CeEE
Q 020307 309 LTNY 312 (328)
Q Consensus 309 f~~v 312 (328)
|+..
T Consensus 211 f~~~ 214 (236)
T 2bm8_A 211 LSMD 214 (236)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
No 189
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.49 E-value=5.8e-13 Score=119.05 Aligned_cols=112 Identities=16% Similarity=0.272 Sum_probs=85.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcC--cCCCCCeEEEEecCCCC-CCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN--TILTSNLALVRADVCRL-PFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--~~~~~~i~~~~~d~~~l-p~~~~~fD~i 236 (328)
.++.+|||||||+|.+++.+++..+..+|+++|+|+.+++.|++++...+ ....+++.++.+|+... +..+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45679999999999999999998666789999999999999999876531 00146899999998654 3346789999
Q ss_pred EeccccccCCCh----HHHHHHHHhcccCCcEEEEEEec
Q 020307 237 HAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
++...-...+.. ..+++++.++|||||++++....
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 996543222221 67899999999999999997643
No 190
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.49 E-value=9.4e-14 Score=126.39 Aligned_cols=108 Identities=11% Similarity=0.032 Sum_probs=86.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCC-CeEEEEecCCCCCC----CCCccc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRLPF----ASGFVD 234 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~-~i~~~~~d~~~lp~----~~~~fD 234 (328)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|++++...++ .. ++.++++|+.++.. ..++||
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl--~~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGL--EQAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTC--TTSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECcHHHHHHHHHhcCCCce
Confidence 3567999999999999999999876 999999999999999999887663 22 49999999866431 146899
Q ss_pred eEEecc----------ccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 235 AVHAGA----------ALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 235 ~i~~~~----------vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+|++.- ++++..+...+++++.++|||||++++....
T Consensus 228 ~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 228 IILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp EEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred EEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 999842 2233345678899999999999998887754
No 191
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.48 E-value=1.8e-13 Score=117.68 Aligned_cols=107 Identities=21% Similarity=0.305 Sum_probs=89.0
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhC-----CCceEEEEeCCHHHHHHHHHHHHhcCc--CCCCCeEEEEecCCCCC----
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSG-----TYSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRADVCRLP---- 227 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~g~D~s~~~~~~a~~~~~~~~~--~~~~~i~~~~~d~~~lp---- 227 (328)
..++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++...+. ....++.++.+|+....
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4567899999999999999999875 456999999999999999999876531 00247999999997754
Q ss_pred CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 228 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
...++||+|++..+++|+ ++++.++|||||++++..+.
T Consensus 158 ~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 456789999999999886 47889999999999998864
No 192
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.48 E-value=1.7e-13 Score=121.56 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=92.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC----CCC
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASG 231 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~ 231 (328)
+...++.+|||+|||+|..+..+++..++ .+|+|+|+++.+++.+++++...+ ..++.++.+|+..++. ..+
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g---~~~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG---VLNTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCHHHHHHHHHHTTC
T ss_pred hCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC---CCcEEEEeCChHhcchhhhhccc
Confidence 55567889999999999999999986443 699999999999999999998876 4589999999977654 257
Q ss_pred ccceEEec------cccc------------cCCChHHHHHHHHhcccCCcEEEEEEeccC
Q 020307 232 FVDAVHAG------AALH------------CWPSPSNAVAEISRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 232 ~fD~i~~~------~vl~------------h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 273 (328)
+||+|++. .++. +......+|+++.++|||||++++++....
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 89999986 2222 123457899999999999999999886554
No 193
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.47 E-value=5.4e-14 Score=122.93 Aligned_cols=108 Identities=19% Similarity=0.127 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHh--CCCceEEEEeCCHHHHHHHHHHHHhc---CcCCCCC--------------------
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKS--GTYSGVVALDFSENMLRQCYDFIKQD---NTILTSN-------------------- 215 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~--~~~~~v~g~D~s~~~~~~a~~~~~~~---~~~~~~~-------------------- 215 (328)
++.+|||+|||+|.++..+++. .+..+|+|+|+|+.+++.|++++... ++ ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 128 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL--TARELERREQSERFGKPSYLEAA 128 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH--HHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc--cccchhhhhhhhhcccccchhhh
Confidence 5679999999999999999987 44568999999999999999877643 21 011
Q ss_pred -----eE-------------EEEecCCCCCC-----CCCccceEEeccccccCCC---------hHHHHHHHHhcccCCc
Q 020307 216 -----LA-------------LVRADVCRLPF-----ASGFVDAVHAGAALHCWPS---------PSNAVAEISRILRSGG 263 (328)
Q Consensus 216 -----i~-------------~~~~d~~~lp~-----~~~~fD~i~~~~vl~h~~d---------~~~~l~~~~r~LkpgG 263 (328)
+. +.++|+.+... ...+||+|+++..+.+..+ ...+++++.++|||||
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 208 (250)
T 1o9g_A 129 QAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHA 208 (250)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTC
T ss_pred hhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCc
Confidence 55 99999876421 3458999999876655543 2488999999999999
Q ss_pred EEEEEEe
Q 020307 264 VFVGTTF 270 (328)
Q Consensus 264 ~l~i~~~ 270 (328)
+++++..
T Consensus 209 ~l~~~~~ 215 (250)
T 1o9g_A 209 VIAVTDR 215 (250)
T ss_dssp EEEEEES
T ss_pred EEEEeCc
Confidence 9999543
No 194
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.47 E-value=5.4e-14 Score=120.72 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=89.5
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-CCC----
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-FAS---- 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-~~~---- 230 (328)
...++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.|++++...++ ..++.++.+|+.+. + +..
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL--SDKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHTTTCT
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC--CCceEEEeCCHHHHHHHhhhccCC
Confidence 445778999999999999999999854 67999999999999999999988764 45699999998543 2 111
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++||+|++... ..+...+++++.++|||||++++.+...
T Consensus 139 ~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 139 WQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp TCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 78999997554 2356789999999999999999977543
No 195
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.47 E-value=6.7e-13 Score=125.79 Aligned_cols=114 Identities=18% Similarity=0.258 Sum_probs=95.0
Q ss_pred hccccCCCeEEEEcCCcCHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CCCCc
Q 020307 156 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGF 232 (328)
Q Consensus 156 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~ 232 (328)
.+...++.+|||+|||+|..+..+++..++ .+++++|+++.+++.+++++...+ ..++.++.+|+..++ +++++
T Consensus 254 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g---~~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 254 VLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG---IKIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSCTTCCSSSSCSSC
T ss_pred hcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC---CCcEEEEEcChhhcchhhccCC
Confidence 355667889999999999999999987544 699999999999999999998766 457999999998876 55578
Q ss_pred cceEEe------ccccccCCCh----------------HHHHHHHHhcccCCcEEEEEEecc
Q 020307 233 VDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 233 fD~i~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
||+|++ ..++.+.++. ..+|+++.++|||||++++++...
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999996 4556665554 568999999999999999988654
No 196
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.47 E-value=8.3e-13 Score=122.18 Aligned_cols=133 Identities=16% Similarity=0.156 Sum_probs=104.3
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..++..++..+++|+|+|+.+++.|++++...++ ..++.+.++|+.++++++++||+|++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl--~~~i~~~~~D~~~~~~~~~~fD~Ii~ 292 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV--LDKIKFIQGDATQLSQYVDSVDFAIS 292 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC--GGGCEEEECCGGGGGGTCSCEEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhhCCcccCCcCEEEE
Confidence 4567899999999999999999988666899999999999999999988764 36899999999999887889999999
Q ss_pred ccccccC-------CCh-HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCe
Q 020307 239 GAALHCW-------PSP-SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLT 310 (328)
Q Consensus 239 ~~vl~h~-------~d~-~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~ 310 (328)
+-..... .+. ..+++++.++| ||.+++.+. +.+.+++.+++.||+
T Consensus 293 npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-------------------------~~~~~~~~~~~~G~~ 345 (373)
T 3tm4_A 293 NLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-------------------------EKKAIEEAIAENGFE 345 (373)
T ss_dssp ECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------------------CHHHHHHHHHHTTEE
T ss_pred CCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------------------CHHHHHHHHHHcCCE
Confidence 6543221 111 56788889988 555555542 346788899999998
Q ss_pred EEEE--EEeCcE
Q 020307 311 NYTS--KVQQSF 320 (328)
Q Consensus 311 ~v~~--~~~~~~ 320 (328)
..+. ...+..
T Consensus 346 ~~~~~~~~nG~l 357 (373)
T 3tm4_A 346 IIHHRVIGHGGL 357 (373)
T ss_dssp EEEEEEEEETTE
T ss_pred EEEEEEEEcCCE
Confidence 8764 334544
No 197
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.47 E-value=9.7e-13 Score=121.76 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCC-CCCccceEEe
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPF-ASGFVDAVHA 238 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~-~~~~fD~i~~ 238 (328)
++.+|||+| |+|.++..++..++..+|+|+|+|+.+++.|+++++..++ .++.++.+|+.+ +|. .+++||+|++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY---EDIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC---CCEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCEEEEEChhhhhchhhccCCccEEEE
Confidence 578999999 9999999999987767999999999999999999987763 389999999988 664 3568999999
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEE-EEEE
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVF-VGTT 269 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l-~i~~ 269 (328)
+..+++. ....+++++.++|||||++ ++..
T Consensus 248 ~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 248 DPPETLE-AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCCCchH-HHHHHHHHHHHHcccCCeEEEEEE
Confidence 8654432 2478899999999999954 4444
No 198
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=2.1e-13 Score=120.78 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=91.3
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.|+++++..+ ..++.++.+|+.+.+. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~---l~~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK---LNNVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT---CSSEEEEESCGGGCCC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEECChHHcCc-cCCceEEEE
Confidence 346789999999999999999998666799999999999999999998866 4578999999987743 678999998
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
.... +...++.++.+.|||||++++.+...
T Consensus 193 d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 7653 66788999999999999999988654
No 199
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=6.7e-13 Score=119.06 Aligned_cols=106 Identities=14% Similarity=0.178 Sum_probs=85.5
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC--CCCCCccceEEecc
Q 020307 163 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHAGA 240 (328)
Q Consensus 163 ~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~i~~~~ 240 (328)
.+|||||||+|.+++.+++..+..+++++|+++.+++.|++++.... .+++.++.+|+.+. .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~---~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR---APRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC---TTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC---CCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 49999999999999999997777799999999999999999876432 56899999998654 23467899999864
Q ss_pred ccccC-CC---hHHHHHHHHhcccCCcEEEEEEec
Q 020307 241 ALHCW-PS---PSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 241 vl~h~-~d---~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
..... +. ...+++++.++|||||++++....
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 32221 11 267899999999999999987753
No 200
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.46 E-value=7.4e-13 Score=117.40 Aligned_cols=148 Identities=13% Similarity=0.120 Sum_probs=104.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCC-CCCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~i 236 (328)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... ++ ..+++.++.+|+.. ++..+++||+|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-DDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-TSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCeeEE
Confidence 3567999999999999999998754579999999999999999987531 11 14689999999865 33345789999
Q ss_pred EeccccccCCC----hHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 237 HAGAALHCWPS----PSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 237 ~~~~vl~h~~d----~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
++.......+. ...+++++.++|||||++++...+... . .+ ....+.+.+++. |..+
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~--~---~~-------------~~~~~~~~l~~~-F~~v 213 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF--T---PE-------------LITNVQRDVKEI-FPIT 213 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT--C---HH-------------HHHHHHHHHHTT-CSEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc--c---HH-------------HHHHHHHHHHHh-CCCe
Confidence 99654322211 257899999999999999997532110 0 00 123455667777 7666
Q ss_pred EEEE-------eCcEEEEEEeC
Q 020307 313 TSKV-------QQSFIMFAAQK 327 (328)
Q Consensus 313 ~~~~-------~~~~~~~~a~k 327 (328)
.... .+.|.++.+.|
T Consensus 214 ~~~~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 214 KLYTANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp EEEEECCTTSGGGCEEEEEEES
T ss_pred EEEEEecCcccCcceEEEEeeC
Confidence 5443 34566667765
No 201
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.45 E-value=1.1e-13 Score=116.47 Aligned_cols=98 Identities=12% Similarity=0.303 Sum_probs=79.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCC--CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----------
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGT--YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------- 227 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------- 227 (328)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.. . ..++.++++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~---~~~v~~~~~d~~~~~~~~~~~~~~i 86 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P---IPNVYFIQGEIGKDNMNNIKNINYI 86 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C---CTTCEEEECCTTTTSSCCC------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C---CCCceEEEccccchhhhhhcccccc
Confidence 4577999999999999999999865 5799999999831 1 457899999998776
Q ss_pred ---------------CCCCccceEEeccccccCC----ChH-------HHHHHHHhcccCCcEEEEEEec
Q 020307 228 ---------------FASGFVDAVHAGAALHCWP----SPS-------NAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 228 ---------------~~~~~fD~i~~~~vl~h~~----d~~-------~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+++++||+|++..++++.. +.. .+++++.++|||||.+++..+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 87 DNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp -----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5667999999988777642 222 3789999999999999987653
No 202
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.45 E-value=2e-14 Score=125.22 Aligned_cols=110 Identities=8% Similarity=0.069 Sum_probs=90.7
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-CCC-----C
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFA-----S 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~-----~ 230 (328)
...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...++ ..++.++.+|+.+. +.. .
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ--EHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC--TTTEEEEESCHHHHHHHHHHHHCS
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHhhccCC
Confidence 345678999999999999999999754 67999999999999999999988764 46899999998653 211 4
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++||+|++... ..+...+++++.++|||||++++.+...
T Consensus 135 ~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 135 HQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp SCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred CCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 78999998765 2346778999999999999999976543
No 203
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.45 E-value=1.3e-13 Score=120.42 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=89.4
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-C-----C
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-F-----A 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-~-----~ 229 (328)
...++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|++++...++ ..++.++.+|+.+. + + .
T Consensus 76 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 76 KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV--DHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHSGGG
T ss_pred HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHHHHHHHhccCC
Confidence 445678999999999999999999854 67999999999999999999987664 45799999998553 3 1 1
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+++||+|++... ..+...+++++.++|||||++++.+.
T Consensus 154 ~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 154 HGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp TTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred CCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 578999998754 34678899999999999999988653
No 204
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.45 E-value=6.8e-13 Score=119.90 Aligned_cols=111 Identities=17% Similarity=0.083 Sum_probs=87.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCC-CCCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~i 236 (328)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... +....+++.++.+|+.+ ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4567999999999999999998865679999999999999999987541 10014689999999865 34346789999
Q ss_pred Eecccccc-CCC------hHHHHHHHHhcccCCcEEEEEEe
Q 020307 237 HAGAALHC-WPS------PSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 237 ~~~~vl~h-~~d------~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
++....++ ... ...+++++.++|||||++++...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99765433 112 26889999999999999999753
No 205
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.45 E-value=4.9e-14 Score=129.25 Aligned_cols=98 Identities=18% Similarity=0.175 Sum_probs=80.8
Q ss_pred CCCeEEEEcCC------cCHHHHHHHH-hCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC----
Q 020307 161 QGGLLVDVSCG------SGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---- 229 (328)
Q Consensus 161 ~~~~vLDiGcG------~G~~~~~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~---- 229 (328)
++.+||||||| +|..+..+++ .++..+|+|+|+|+.+. .. .+++.++++|+.++|+.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~-----~~rI~fv~GDa~dlpf~~~l~ 283 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VD-----ELRIRTIQGDQNDAEFLDRIA 283 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GC-----BTTEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hc-----CCCcEEEEecccccchhhhhh
Confidence 56799999999 5555555554 46778999999999973 11 56899999999998876
Q ss_pred --CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 230 --SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 230 --~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+++||+|++.. .+++.++..+|+++.++|||||++++.+..
T Consensus 284 ~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 284 RRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 68999999875 467778889999999999999999998865
No 206
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.45 E-value=7.9e-13 Score=118.47 Aligned_cols=109 Identities=13% Similarity=0.086 Sum_probs=84.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHh--cCcCCCCCeEEEEecCCC-CCCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~~~~~i~~~~~d~~~-lp~~~~~fD~i 236 (328)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++.. .++ ..+++.++.+|+.. ++..+++||+|
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF-DDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCceEE
Confidence 346799999999999999999885567999999999999999998753 111 14689999999754 34346789999
Q ss_pred Eecccccc-CC-----ChHHHHHHHHhcccCCcEEEEEEe
Q 020307 237 HAGAALHC-WP-----SPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 237 ~~~~vl~h-~~-----d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
++... .+ +. ....+++++.++|||||++++...
T Consensus 168 i~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 168 IIDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEEC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 98532 22 21 126889999999999999999753
No 207
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.44 E-value=5.3e-13 Score=122.77 Aligned_cols=103 Identities=21% Similarity=0.351 Sum_probs=87.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe-
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA- 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~- 238 (328)
.++++|||||||+|.++..+++.|. .+|+|+|.|+ +++.|++.++.+++ ..++.++.+|++++.++ ++||+|++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~~--~~~i~~i~~~~~~~~lp-e~~DvivsE 156 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNGL--EDRVHVLPGPVETVELP-EQVDAIVSE 156 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-SCEEEEECC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcCC--CceEEEEeeeeeeecCC-ccccEEEee
Confidence 4688999999999999999998874 4799999996 88999999888775 67899999999988776 57999998
Q ss_pred --ccccccCCChHHHHHHHHhcccCCcEEEE
Q 020307 239 --GAALHCWPSPSNAVAEISRILRSGGVFVG 267 (328)
Q Consensus 239 --~~vl~h~~d~~~~l~~~~r~LkpgG~l~i 267 (328)
...+.+-.....++....++|||||+++-
T Consensus 157 ~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 157 WMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccccchhhhHHHHHHhhCCCCceECC
Confidence 44456656778889999999999998764
No 208
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.44 E-value=2.4e-13 Score=116.93 Aligned_cols=106 Identities=23% Similarity=0.349 Sum_probs=85.6
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCC------CceEEEEeCCHHHHHHHHHHHHhcCc--CCCCCeEEEEecCCCCCCCC
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGT------YSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRADVCRLPFAS 230 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~------~~~v~g~D~s~~~~~~a~~~~~~~~~--~~~~~i~~~~~d~~~lp~~~ 230 (328)
..++.+|||+|||+|.++..+++... ..+|+++|+++.+++.+++++...+. ....++.++.+|... ++++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCc
Confidence 45678999999999999999988532 24899999999999999998765320 002478999999876 3444
Q ss_pred -CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 231 -GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 231 -~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
++||+|++..+++|+. +++.++|||||++++....
T Consensus 161 ~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 161 NAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred CCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 7899999999999875 7889999999999998754
No 209
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.44 E-value=3.5e-13 Score=128.44 Aligned_cols=107 Identities=20% Similarity=0.289 Sum_probs=90.1
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++...++ ..++.++.+|+.+++++ ++||+|+
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~gl--~~~v~~~~~d~~~~~~~-~~fD~Iv 229 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEVSLP-EQVDIII 229 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHcCC--CCcEEEEECchhhCccC-CCeEEEE
Confidence 34467899999999999999998864 56999999998 99999999887764 47899999999887764 5899999
Q ss_pred eccccccCCCh--HHHHHHHHhcccCCcEEEEEE
Q 020307 238 AGAALHCWPSP--SNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 238 ~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~ 269 (328)
+..+++|+.+. ...+.++.++|||||++++..
T Consensus 230 s~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 230 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 98888887654 467788899999999998644
No 210
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.42 E-value=2.4e-13 Score=117.95 Aligned_cols=110 Identities=19% Similarity=0.247 Sum_probs=88.9
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CC-------
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP------- 227 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp------- 227 (328)
+...++.+|||||||+|.++..+++..+ ..+|+++|+++.+++.|++++...+. ..++.++.+|+.+ ++
T Consensus 56 ~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~~~~~~~ 133 (239)
T 2hnk_A 56 TKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSALETLQVLIDSKS 133 (239)
T ss_dssp HHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHCSS
T ss_pred HHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHHHHHHHhhcc
Confidence 3445788999999999999999999854 56999999999999999999887653 3459999999754 22
Q ss_pred -------CCC--CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 228 -------FAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 228 -------~~~--~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
|++ ++||+|++....+ +...+++++.++|||||++++.+..
T Consensus 134 ~~~~~~~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 134 APSWASDFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp CCGGGTTTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred cccccccccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 7899999886544 4568899999999999999997643
No 211
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.42 E-value=9.6e-13 Score=117.23 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=85.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCcc---ceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFV---DAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~f---D~i 236 (328)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...++ ..++.++++|+.+. ++ ++| |+|
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l--~~~v~~~~~D~~~~-~~-~~f~~~D~I 196 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV--SDRFFVRKGEFLEP-FK-EKFASIEMI 196 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC--TTSEEEEESSTTGG-GG-GGTTTCCEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcchhh-cc-cccCCCCEE
Confidence 35679999999999999999999 777999999999999999999988763 34599999999763 22 479 999
Q ss_pred Eec------------cccccCC--------ChHHHHHHHH-hcccCCcEEEEEE
Q 020307 237 HAG------------AALHCWP--------SPSNAVAEIS-RILRSGGVFVGTT 269 (328)
Q Consensus 237 ~~~------------~vl~h~~--------d~~~~l~~~~-r~LkpgG~l~i~~ 269 (328)
+++ .+. |-+ |...+++++. +.|+|||++++..
T Consensus 197 vsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp EECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred EEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 997 222 322 2237899999 9999999999854
No 212
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.42 E-value=2.9e-13 Score=117.01 Aligned_cols=109 Identities=14% Similarity=0.102 Sum_probs=88.6
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC----CCCCC--
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR----LPFAS-- 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~----lp~~~-- 230 (328)
...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|++++...++ ..++.++.+|+.+ ++..+
T Consensus 69 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 69 SLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp HHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHHHHHHTSSSC
T ss_pred HhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 344678999999999999999998754 56999999999999999999887663 4579999999743 33333
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
++||+|++.... .+...+++++.++|||||++++.+..
T Consensus 147 ~~fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 147 PEFDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp CCEEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred CCcCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 789999987652 35678899999999999999997644
No 213
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.41 E-value=1.3e-12 Score=118.26 Aligned_cols=109 Identities=14% Similarity=0.144 Sum_probs=85.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCC-CCCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~i 236 (328)
.++.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++... +. ..+++.++.+|+.+ ++..+++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY-EDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG-GSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEEccHHHHHhhcCCCceEE
Confidence 3567999999999999999998755679999999999999999987641 11 14689999999855 23335789999
Q ss_pred EeccccccCCC-----hHHHHHHHHhcccCCcEEEEEEe
Q 020307 237 HAGAALHCWPS-----PSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 237 ~~~~vl~h~~d-----~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
++... +++.. ...+++++.++|||||++++...
T Consensus 194 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 194 IVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 98643 22211 16889999999999999999764
No 214
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.40 E-value=4.6e-13 Score=115.18 Aligned_cols=109 Identities=16% Similarity=0.120 Sum_probs=88.7
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-CCC----
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-FAS---- 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-~~~---- 230 (328)
...++.+|||+|||+|.++..+++..+ ..+++++|+++.+++.|++++...++ ..++.++.+|+.+. + +..
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA--EHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHHTTCT
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CCeEEEEEcCHHHHHHHHHhcCCC
Confidence 345678999999999999999998754 56999999999999999999987664 46899999998543 1 111
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
++||+|++... ..+...+++++.++|||||++++.+..
T Consensus 144 ~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 144 GTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp TCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 68999998654 335578899999999999999997644
No 215
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.39 E-value=5.4e-12 Score=111.39 Aligned_cols=129 Identities=15% Similarity=0.166 Sum_probs=102.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++++.+++ ..++.++.+|..+++ ..+.||.|++.
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v--~~~v~~~~~D~~~~~-~~~~~D~Vi~~ 199 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFP-GENIADRILMG 199 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCC-CCSCEEEEEEC
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEeCcHHHhc-cccCCCEEEEC
Confidence 468899999999999999999886 35899999999999999999998875 567999999998876 35789999975
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
. .+....+|..+.++|||||++.+.+..... .......+.++++.+..|+++.
T Consensus 200 ~----p~~~~~~l~~a~~~lk~gG~ih~~~~~~e~----------------~~~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 200 Y----VVRTHEFIPKALSIAKDGAIIHYHNTVPEK----------------LMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp C----CSSGGGGHHHHHHHEEEEEEEEEEEEEEGG----------------GTTTTTHHHHHHHHHHTTCEEE
T ss_pred C----CCcHHHHHHHHHHHcCCCCEEEEEeeeccc----------------ccchhHHHHHHHHHHHcCCcEE
Confidence 3 244567889999999999998776644321 1112234678888999999754
No 216
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.38 E-value=2.6e-13 Score=120.99 Aligned_cols=104 Identities=18% Similarity=0.263 Sum_probs=81.0
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++...+. ..++.++.+|+.+++++ +||+|
T Consensus 24 ~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~D~~~~~~~--~fD~v 97 (285)
T 1zq9_A 24 AALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTPV--ASKLQVLVGDVLKTDLP--FFDTC 97 (285)
T ss_dssp TCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTSTT--GGGEEEEESCTTTSCCC--CCSEE
T ss_pred cCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcCC--CCceEEEEcceecccch--hhcEE
Confidence 4445778999999999999999999876 999999999999999998765432 25799999999887765 79999
Q ss_pred Eec-----------cccccCCChHHHH----HHH--HhcccCCcEEE
Q 020307 237 HAG-----------AALHCWPSPSNAV----AEI--SRILRSGGVFV 266 (328)
Q Consensus 237 ~~~-----------~vl~h~~d~~~~l----~~~--~r~LkpgG~l~ 266 (328)
+++ .+++|.+++...+ +|+ +++|||||.++
T Consensus 98 v~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 98 VANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 996 4556655543211 333 46899999653
No 217
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.38 E-value=3.3e-12 Score=113.60 Aligned_cols=107 Identities=13% Similarity=0.127 Sum_probs=83.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcC------CCCCeEEEEecCCCC-CCCC
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTI------LTSNLALVRADVCRL-PFAS 230 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~------~~~~i~~~~~d~~~l-p~~~ 230 (328)
.++.+|||||||+|.++..+++. +..+++++|+++.+++.|++++ .. ++. ..+++.++.+|+.+. +. +
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~ 150 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N 150 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence 45679999999999999999988 6679999999999999999987 32 110 146899999997542 22 5
Q ss_pred CccceEEeccccccCCC-----hHHHHHHHHhcccCCcEEEEEEe
Q 020307 231 GFVDAVHAGAALHCWPS-----PSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d-----~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
++||+|++.... ++.. ...+++++.++|||||++++...
T Consensus 151 ~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 151 RGFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CCEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 789999986543 2211 25789999999999999999764
No 218
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.38 E-value=9.2e-13 Score=119.77 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=85.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCCC-C-CCCCccce
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-P-FASGFVDA 235 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p-~~~~~fD~ 235 (328)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... ++ ..+++.++.+|+.+. + .++++||+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-EDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEECCHHHHHHhccCCCccE
Confidence 4568999999999999999998866679999999999999999987642 21 146899999998653 2 34578999
Q ss_pred EEecccccc-CCC---hHHHHHHHHhcccCCcEEEEEE
Q 020307 236 VHAGAALHC-WPS---PSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 236 i~~~~vl~h-~~d---~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
|++...... ..+ ...+++++.++|||||++++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 998643111 111 3688999999999999999964
No 219
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.38 E-value=6.8e-12 Score=105.58 Aligned_cols=95 Identities=14% Similarity=0.139 Sum_probs=74.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.+++++ .++.++++|+.++| ++||+|+++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v~~~ 117 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTWIMN 117 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEEEEC
T ss_pred CCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEEEEC
Confidence 367899999999999999999884 347999999999999999863 37899999998875 689999999
Q ss_pred cccccCCC--hHHHHHHHHhcccCCcEEEEEE
Q 020307 240 AALHCWPS--PSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 240 ~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
..++|+.+ ...+++++.+++ |+ +++..
T Consensus 118 ~p~~~~~~~~~~~~l~~~~~~~--g~-~~~~~ 146 (200)
T 1ne2_A 118 PPFGSVVKHSDRAFIDKAFETS--MW-IYSIG 146 (200)
T ss_dssp CCC-------CHHHHHHHHHHE--EE-EEEEE
T ss_pred CCchhccCchhHHHHHHHHHhc--Cc-EEEEE
Confidence 99998865 347899999988 44 44433
No 220
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.37 E-value=2.9e-12 Score=109.39 Aligned_cols=147 Identities=14% Similarity=0.077 Sum_probs=101.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||||||+|.++..+. +..+|+|+|+|+.+++.++..+... ..+..+..+|....+.+ ++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~----g~~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK----DWDFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT----TCEEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeecccCCCC-CCcchHHHH
Confidence 457799999999999998877 4669999999999999999998765 45788999999877754 589999999
Q ss_pred cccccCCCh-HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEeC
Q 020307 240 AALHCWPSP-SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ 318 (328)
Q Consensus 240 ~vl~h~~d~-~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~ 318 (328)
-++||+.+. ...+.++...|+++|+++-.. .+. +.+.. ..+.-.-...|++.+ ...+.+++....+
T Consensus 176 k~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP-tks----------l~Gr~-~gm~~~Y~~~~e~~~-~~~~~~~~~~~~~ 242 (253)
T 3frh_A 176 KLLPLLEREQAGSAMALLQSLNTPRMAVSFP-TRS----------LGGRG-KGMEANYAAWFEGGL-PAEFEIEDKKTIG 242 (253)
T ss_dssp SCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE-CC----------------------CHHHHHHHHS-CTTEEEEEEEEET
T ss_pred HHHHHhhhhchhhHHHHHHHhcCCCEEEEcC-hHH----------hcCCC-cchhhHHHHHHHHHh-hccchhhhheecC
Confidence 888888533 223448888999987666544 221 11110 011112234566666 4556666667776
Q ss_pred cEEEEEEeC
Q 020307 319 SFIMFAAQK 327 (328)
Q Consensus 319 ~~~~~~a~k 327 (328)
+-++++-+|
T Consensus 243 nEl~~~i~~ 251 (253)
T 3frh_A 243 TELIYLIKK 251 (253)
T ss_dssp TEEEEEEEE
T ss_pred ceEEEEEec
Confidence 665555443
No 221
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.37 E-value=4.2e-12 Score=119.61 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=94.2
Q ss_pred hccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CCCCcc
Q 020307 156 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFV 233 (328)
Q Consensus 156 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~f 233 (328)
.+...++.+|||+|||+|..+..+++..+..+++++|+++.+++.+++++...+. ++.++.+|+..++ +++++|
T Consensus 241 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~----~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM----KATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp HHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC----CCEEEECCTTCTHHHHTTCCE
T ss_pred HcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC----CeEEEeCchhhchhhcccCCC
Confidence 3556788999999999999999999987667999999999999999999887652 5789999998876 556789
Q ss_pred ceEEe------ccccccCCCh----------------HHHHHHHHhcccCCcEEEEEEecc
Q 020307 234 DAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 234 D~i~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
|+|++ .+++.+.++. ..+|+++.++|||||++++++...
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99996 3455665553 377999999999999999988544
No 222
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.37 E-value=7.7e-13 Score=114.72 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=88.2
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-C-----C
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-F-----A 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-~-----~ 229 (328)
...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|+++++..++ ..++.++.+|+.+. + + .
T Consensus 67 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV--EHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHSTTC
T ss_pred HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhccCC
Confidence 345678999999999999999999854 67999999999999999999987764 45799999998543 2 2 1
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.++||+|++.... .+...+++++.++|||||++++.+.
T Consensus 145 ~~~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 145 EGSYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp TTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CCCcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 5789999986432 2457889999999999999988653
No 223
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.37 E-value=2.6e-12 Score=110.77 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=108.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.+..+|||||||.|-++..++...+..+|+++|+++.+++.++.++...+ .+..+...|...-+ +.+.||+|++.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g----~~~~~~v~D~~~~~-p~~~~DvaL~l 205 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN----VPHRTNVADLLEDR-LDEPADVTLLL 205 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT----CCEEEEECCTTTSC-CCSCCSEEEET
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeeecccC-CCCCcchHHHH
Confidence 34679999999999999999988888899999999999999999998764 35788899986554 46789999999
Q ss_pred cccccCCChH-HHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEeC
Q 020307 240 AALHCWPSPS-NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ 318 (328)
Q Consensus 240 ~vl~h~~d~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~ 318 (328)
-+++|+.+.. ..+-++...|+|+|+++...--.-..-.+.+...+ ...|++.+.+.|..+-+ .+.+
T Consensus 206 kti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y------------~~~~e~~~~~~g~~~~~-~~~~ 272 (281)
T 3lcv_B 206 KTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNY------------SQSFESQARERSCRIQR-LEIG 272 (281)
T ss_dssp TCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHH------------HHHHHHHHHHHTCCEEE-EEET
T ss_pred HHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHH------------HHHHHHHHHhcCCceee-eeec
Confidence 9999996553 23338999999999887755311111111112221 35788889999996555 5555
Q ss_pred cEEEEEE
Q 020307 319 SFIMFAA 325 (328)
Q Consensus 319 ~~~~~~a 325 (328)
+-.+++-
T Consensus 273 nEl~y~i 279 (281)
T 3lcv_B 273 NELIYVI 279 (281)
T ss_dssp TEEEEEE
T ss_pred CeeEEEe
Confidence 5444443
No 224
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.37 E-value=1e-12 Score=118.08 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=85.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHh--cCcCCCCCeEEEEecCCC-CCCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~~~~~~~i~~~~~d~~~-lp~~~~~fD~i 236 (328)
.++.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++.. .++ ..+++.++.+|+.+ ++..+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~-~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY-SSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc-CCCcEEEEECcHHHHHhhCCCCceEE
Confidence 456799999999999999999886667999999999999999998764 121 14689999999855 34446789999
Q ss_pred EeccccccCCC----hHHHHHHHHhcccCCcEEEEEEec
Q 020307 237 HAGAALHCWPS----PSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~d----~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
++....+..+. ...+++++.++|||||++++...+
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 98654322111 146899999999999999997643
No 225
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.37 E-value=1.8e-11 Score=103.43 Aligned_cols=123 Identities=14% Similarity=0.147 Sum_probs=94.0
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..+++.+. .+++|+|+|+.+++.+++++...+ . ++.++.+|+.+++ ++||+|++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~---~~~D~v~~ 118 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFK---G-KFKVFIGDVSEFN---SRVDIVIM 118 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGT---T-SEEEEESCGGGCC---CCCSEEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcC---C-CEEEEECchHHcC---CCCCEEEE
Confidence 34678999999999999999998853 479999999999999999887654 2 7999999998875 48999999
Q ss_pred ccccccCC--ChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 239 GAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 239 ~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
+..+++.. ....+++++.+++ |+.+++..... -+.+.+.+.+++.||++..
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~----------------------~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYSIHLAKP----------------------EVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEEEEECCH----------------------HHHHHHHHHHHHTTEEEEE
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEEEEeCCc----------------------CCHHHHHHHHHHCCCeEEE
Confidence 88777664 3357889999988 55444332110 0123567788999997654
No 226
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.36 E-value=5.3e-12 Score=120.07 Aligned_cols=118 Identities=18% Similarity=0.182 Sum_probs=93.8
Q ss_pred cccc--CCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-CCCc
Q 020307 157 FKSA--QGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-ASGF 232 (328)
Q Consensus 157 l~~~--~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-~~~~ 232 (328)
+... ++.+|||+|||+|..+..+++.. ....|+++|+|+.+++.++++++..+ ..++.++.+|+..++. ..++
T Consensus 111 L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g---~~nv~~~~~D~~~~~~~~~~~ 187 (479)
T 2frx_A 111 LFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTHFDGRVFGAAVPEM 187 (479)
T ss_dssp HTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT---CCSEEEECCCSTTHHHHSTTC
T ss_pred hCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCCHHHhhhhcccc
Confidence 4445 78899999999999999999874 34689999999999999999998876 4579999999988763 4578
Q ss_pred cceEEec------cccccCCC----------------hHHHHHHHHhcccCCcEEEEEEeccCCCCc
Q 020307 233 VDAVHAG------AALHCWPS----------------PSNAVAEISRILRSGGVFVGTTFLRYTSST 277 (328)
Q Consensus 233 fD~i~~~------~vl~h~~d----------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 277 (328)
||+|++. .++.+.++ ...+|+++.++|||||++++++.......+
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~En 254 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEEN 254 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTT
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccC
Confidence 9999972 34444333 136799999999999999998865543333
No 227
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.36 E-value=1.1e-12 Score=109.79 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=76.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCC---------ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEE-EecCCCCC--
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTY---------SGVVALDFSENMLRQCYDFIKQDNTILTSNLALV-RADVCRLP-- 227 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~---------~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~-~~d~~~lp-- 227 (328)
.++.+|||+|||+|.++..+++..+. .+|+|+|+|+.. . ..++.++ .+|+...+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~---~~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P---LEGATFLCPADVTDPRTS 86 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C---CTTCEEECSCCTTSHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c---CCCCeEEEeccCCCHHHH
Confidence 46789999999999999999998432 689999999831 1 3467888 88886643
Q ss_pred ------CCCCccceEEeccccccC----CCh-------HHHHHHHHhcccCCcEEEEEEecc
Q 020307 228 ------FASGFVDAVHAGAALHCW----PSP-------SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 228 ------~~~~~fD~i~~~~vl~h~----~d~-------~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
+++++||+|++...++.. .++ ..+++++.++|||||++++.++..
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 335689999997654432 233 478999999999999999987643
No 228
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.34 E-value=3.6e-13 Score=119.31 Aligned_cols=103 Identities=20% Similarity=0.220 Sum_probs=77.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHh-cCcCCCCCeEEE--EecCCCCCCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ-DNTILTSNLALV--RADVCRLPFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~~~~~~~i~~~--~~d~~~lp~~~~~fD~i 236 (328)
.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++... ... ..++.++ ++|+..+| +++||+|
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~--~~~v~~~~~~~D~~~l~--~~~fD~V 152 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETF--GWNLITFKSKVDVTKME--PFQADTV 152 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCT--TGGGEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhc--CCCeEEEeccCcHhhCC--CCCcCEE
Confidence 46789999999999999999988 3899999998 54333211000 000 1178899 89998876 6799999
Q ss_pred EeccccccCCChH-------HHHHHHHhcccCCc--EEEEEEec
Q 020307 237 HAGAALHCWPSPS-------NAVAEISRILRSGG--VFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~d~~-------~~l~~~~r~LkpgG--~l~i~~~~ 271 (328)
++..+ ++..++. .+|+++.++||||| .+++.++.
T Consensus 153 vsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 153 LCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 99887 5555542 37899999999999 99987765
No 229
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.34 E-value=1.5e-12 Score=115.96 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=86.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCc-CCCCCeEEEEecCCCC-CCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT-ILTSNLALVRADVCRL-PFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~-~~~~~i~~~~~d~~~l-p~~~~~fD~i~ 237 (328)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++...+. ...+++.++.+|+.+. +..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 456899999999999999999886667999999999999999998754210 0146899999998653 22357899999
Q ss_pred eccccccCCCh----HHHHHHHHhcccCCcEEEEEEe
Q 020307 238 AGAALHCWPSP----SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 238 ~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+.....+.+.. ..+++++.++|||||++++...
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 86543222211 5889999999999999998754
No 230
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.34 E-value=2.5e-12 Score=121.33 Aligned_cols=112 Identities=18% Similarity=0.182 Sum_probs=90.9
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-CCCCccc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVD 234 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD 234 (328)
+...++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++++..+ .. +.++.+|+..++ ...++||
T Consensus 97 L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G---~~-v~~~~~Da~~l~~~~~~~FD 172 (464)
T 3m6w_A 97 LDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG---AP-LAVTQAPPRALAEAFGTYFH 172 (464)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC---CC-CEEECSCHHHHHHHHCSCEE
T ss_pred cCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---Ce-EEEEECCHHHhhhhccccCC
Confidence 5566889999999999999999998743 3689999999999999999998876 34 889999987765 2467899
Q ss_pred eEEe------ccccccCCCh----------------HHHHHHHHhcccCCcEEEEEEecc
Q 020307 235 AVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 235 ~i~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
+|++ ..++.+-++. ..+|+++.++|||||+++.++...
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 9995 2334444443 578999999999999999988554
No 231
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.34 E-value=1.1e-12 Score=118.37 Aligned_cols=108 Identities=13% Similarity=0.132 Sum_probs=82.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCC-CCCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~i 236 (328)
.++.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++... ++ ..+++.++.+|+.+ ++..+++||+|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~-~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGF-SHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGG-GCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcccc-CCCCEEEEEChHHHHHHhcCCCceEE
Confidence 3567999999999999999998866679999999999999999987642 11 14689999999865 33346789999
Q ss_pred EeccccccCCCh-----HHHHHHHHhcccCCcEEEEEE
Q 020307 237 HAGAALHCWPSP-----SNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 237 ~~~~vl~h~~d~-----~~~l~~~~r~LkpgG~l~i~~ 269 (328)
++... +++..+ ..+++++.++|||||++++..
T Consensus 186 i~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98653 333211 578999999999999999875
No 232
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.33 E-value=4.5e-13 Score=118.00 Aligned_cols=103 Identities=18% Similarity=0.199 Sum_probs=77.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHh-cCcCCCCCeEEE--EecCCCCCCCCCccceE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ-DNTILTSNLALV--RADVCRLPFASGFVDAV 236 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~~~~~~~i~~~--~~d~~~lp~~~~~fD~i 236 (328)
.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... ... ..++.++ ++|+..++ +++||+|
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~--~~~v~~~~~~~D~~~l~--~~~fD~V 144 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESY--GWNIVKFKSRVDIHTLP--VERTDVI 144 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBT--TGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhcc--CCCeEEEecccCHhHCC--CCCCcEE
Confidence 46789999999999999999987 3899999998 43222211000 000 1168888 89998876 6799999
Q ss_pred EeccccccCCChH-------HHHHHHHhcccCCc--EEEEEEec
Q 020307 237 HAGAALHCWPSPS-------NAVAEISRILRSGG--VFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~d~~-------~~l~~~~r~LkpgG--~l~i~~~~ 271 (328)
++..+ ++..++. .+|+++.++||||| .+++.++.
T Consensus 145 ~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 145 MCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 99877 6655542 37899999999999 99997765
No 233
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.32 E-value=1.8e-12 Score=114.02 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=83.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
..+.+|||||||+|.++..+++. + .+++++|+++.+++.|++++... +. ..+++.++.+|..+.. ++||+|+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~-~~~rv~~~~~D~~~~~---~~fD~Ii 144 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVK-NNKNFTHAKQLLDLDI---KKYDLIF 144 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHH-TCTTEEEESSGGGSCC---CCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhcccc-CCCeEEEEechHHHHH---hhCCEEE
Confidence 34679999999999999999988 5 79999999999999998875421 11 1468999999987754 7899999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 238 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 238 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+. ..+|..+++++.++|||||++++...
T Consensus 145 ~d-----~~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 145 CL-----QEPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp ES-----SCCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EC-----CCChHHHHHHHHHhcCCCcEEEEEcC
Confidence 86 35788899999999999999999653
No 234
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.32 E-value=3.2e-12 Score=120.47 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=89.8
Q ss_pred hccccCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-CCCCcc
Q 020307 156 YFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFV 233 (328)
Q Consensus 156 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~f 233 (328)
.+...++.+|||+|||+|..+..++... ...+|+++|+|+.+++.+++++...+ ..++.++.+|+..++ ..+++|
T Consensus 100 ~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g---~~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 100 AAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG---VSNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT---CSSEEEECCCHHHHHHHHTTCE
T ss_pred HcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCceEEEeCCHHHhhhhccccC
Confidence 3556788999999999999999998863 34689999999999999999998877 457999999987764 235789
Q ss_pred ceEEecc------ccccCCCh----------------HHHHHHHHhcccCCcEEEEEEecc
Q 020307 234 DAVHAGA------ALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 234 D~i~~~~------vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
|+|++.- ++.+-++. ..+|+++.++|||||+++.++-..
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 9999742 23221111 267999999999999999988543
No 235
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.32 E-value=3.8e-12 Score=118.20 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=85.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCC-CeEEEEecCCCC-CC---CCCccc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRL-PF---ASGFVD 234 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~-~i~~~~~d~~~l-p~---~~~~fD 234 (328)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+++++..++ .. ++.++++|+.+. +. ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~--~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHL--DMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTC--CCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHHhCCCcc
Confidence 467899999999999999999865 24899999999999999999988763 33 899999998652 21 245899
Q ss_pred eEEecccc-----ccCCCh----HHHHHHHHhcccCCcEEEEEEecc
Q 020307 235 AVHAGAAL-----HCWPSP----SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 235 ~i~~~~vl-----~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
+|++.--. .+..+. ..+++.+.++|+|||+++++....
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99985322 233333 346778899999999999987543
No 236
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.30 E-value=9.5e-12 Score=116.03 Aligned_cols=108 Identities=17% Similarity=0.188 Sum_probs=88.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCC-C-CeEEEEecCCCCCC----CCCcc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-S-NLALVRADVCRLPF----ASGFV 233 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~-~-~i~~~~~d~~~lp~----~~~~f 233 (328)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++...+ . . ++.++.+|+.+... ...+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ng---l~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNK---LDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT---CCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC---CCccceEEEECCHHHHHHHHHhcCCCC
Confidence 467899999999999999999986 4589999999999999999998765 3 3 79999999866421 14689
Q ss_pred ceEEecc---------ccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 234 DAVHAGA---------ALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 234 D~i~~~~---------vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
|+|++.- +.++..+...++.++.+.|+|||++++++..
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999862 2333345678899999999999999998854
No 237
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.30 E-value=4.3e-12 Score=106.34 Aligned_cols=97 Identities=16% Similarity=0.287 Sum_probs=74.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC-------C--
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-------S-- 230 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-------~-- 230 (328)
.++.+|||+|||+|.++..+++.+ .+|+|+|+++.. . .+++.++++|+.+.+.. .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~-----------~---~~~v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME-----------E---IAGVRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC-----------C---CTTCEEEECCTTSSSHHHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc-----------c---CCCeEEEEccccCHHHHHHHHHHhhcc
Confidence 468899999999999999999884 499999999741 1 46899999999876521 1
Q ss_pred --CccceEEeccccccCCC-----------hHHHHHHHHhcccCCcEEEEEEecc
Q 020307 231 --GFVDAVHAGAALHCWPS-----------PSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 231 --~~fD~i~~~~vl~h~~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++||+|++......... ...+++.+.++|||||.+++..+..
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 48999999654322111 2467889999999999999988643
No 238
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.28 E-value=7.6e-12 Score=116.11 Aligned_cols=107 Identities=20% Similarity=0.240 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC----CCCccceE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAV 236 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~~fD~i 236 (328)
++.+|||+|||+|.++..++... .+|+|+|+|+.+++.|++++...+ ..++.++.+|+.+... ..++||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~n~---~~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARLNG---LGNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHHTT---CTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC---CCCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 67799999999999999999883 489999999999999999998876 3459999999866431 25689999
Q ss_pred Eecccc---------ccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 237 HAGAAL---------HCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 237 ~~~~vl---------~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++.--. ....+...+++++.++|+|||++++++...
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 984321 111234578999999999999999988643
No 239
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.27 E-value=4.6e-12 Score=118.15 Aligned_cols=109 Identities=16% Similarity=0.147 Sum_probs=87.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC----CCCccceE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAV 236 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~~fD~i 236 (328)
++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++...++ ..++.++.+|+.+... ..++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGV--EDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 67899999999999999999874 34899999999999999999987663 2389999999866431 25689999
Q ss_pred Eeccc---------cccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 237 HAGAA---------LHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 237 ~~~~v---------l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
++.-- .++..+...++.++.++|+|||++++.+.+.
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 98532 2222345678999999999999999988654
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.26 E-value=1.9e-11 Score=111.79 Aligned_cols=128 Identities=11% Similarity=0.127 Sum_probs=98.5
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCC-----ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTY-----SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVD 234 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~-----~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD 234 (328)
.++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++...+ . ++.++.+|.... ...++||
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g---~-~~~i~~~D~l~~-~~~~~fD 203 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR---Q-KMTLLHQDGLAN-LLVDPVD 203 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT---C-CCEEEESCTTSC-CCCCCEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC---C-CceEEECCCCCc-cccCCcc
Confidence 35679999999999999999877532 589999999999999999887664 2 688999998653 2457899
Q ss_pred eEEeccccccCCChH------------------HHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCC
Q 020307 235 AVHAGAALHCWPSPS------------------NAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLT 296 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~------------------~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (328)
+|+++-.+.++++.. .+++.+.+.|||||++++..++.. ...-.
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~------------------~~~~~ 265 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAM------------------FGTSD 265 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGG------------------GGSTT
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchh------------------cCCch
Confidence 999987766554332 579999999999999999987531 00112
Q ss_pred HHHHHHHHHHCCCe
Q 020307 297 EEEIEDLCTSCGLT 310 (328)
Q Consensus 297 ~~~l~~ll~~~Gf~ 310 (328)
...+++.+.+.|+.
T Consensus 266 ~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 266 FAKVDKFIKKNGHI 279 (344)
T ss_dssp HHHHHHHHHHHEEE
T ss_pred HHHHHHHHHhCCeE
Confidence 36777777777763
No 241
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.25 E-value=3.2e-12 Score=111.27 Aligned_cols=102 Identities=10% Similarity=0.179 Sum_probs=77.3
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC-Cccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-GFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++.. ..++.++.+|+.++++++ ..|++
T Consensus 26 ~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~v 98 (244)
T 1qam_A 26 IRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQFKFPKNQSYKI 98 (244)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGGCCCCSSCCCEE
T ss_pred CCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHhCCcccCCCeEE
Confidence 4445788999999999999999999874 999999999999999988653 458999999999988764 45643
Q ss_pred EEe----------ccccccCCChHHHH----HHHHhcccCCcEE
Q 020307 236 VHA----------GAALHCWPSPSNAV----AEISRILRSGGVF 265 (328)
Q Consensus 236 i~~----------~~vl~h~~d~~~~l----~~~~r~LkpgG~l 265 (328)
|.. ..+++|...+..++ ..+.|+++|+|.+
T Consensus 99 v~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l 142 (244)
T 1qam_A 99 FGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSL 142 (244)
T ss_dssp EEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHH
T ss_pred EEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcch
Confidence 321 23445544444444 4478888888865
No 242
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.24 E-value=3.9e-11 Score=109.36 Aligned_cols=101 Identities=19% Similarity=0.201 Sum_probs=84.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.++.. ++. ..+|+|+|+|+.+++.+++++...++ ..++.++.+|+.+.. ++||+|++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~--~~~V~~vD~s~~ai~~a~~n~~~n~l--~~~v~~~~~D~~~~~---~~fD~Vi~d 265 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKN--AKKIYAIDINPHAIELLKKNIKLNKL--EHKIIPILSDVREVD---VKGNRVIMN 265 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTT--SSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCGGGCC---CCEEEEEEC
T ss_pred CCCCEEEEccCccCHHHHh-ccC--CCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECChHHhc---CCCcEEEEC
Confidence 3678999999999999999 773 45999999999999999999988764 358999999998765 789999985
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
-. .....+++.+.++|+|||++++.+...
T Consensus 266 pP----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 266 LP----KFAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CT----TTGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred Cc----HhHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 31 123478999999999999999988653
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.22 E-value=1.6e-11 Score=122.03 Aligned_cols=109 Identities=17% Similarity=0.224 Sum_probs=89.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCC-CCeEEEEecCCC-CCCCCCccceEE
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCR-LPFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~-lp~~~~~fD~i~ 237 (328)
.++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|++++...++ . .++.++++|+.+ ++...++||+|+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl--~~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGL--TGRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTC--CSTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEEecCHHHHHHhcCCCccEEE
Confidence 4688999999999999999998764 4699999999999999999988764 3 479999999866 344467899999
Q ss_pred ecc-----------ccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 238 AGA-----------ALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 238 ~~~-----------vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+.- ++++..+...+++.+.++|+|||++++++..
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 853 2333345567899999999999999987754
No 244
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.22 E-value=5.5e-11 Score=110.35 Aligned_cols=106 Identities=16% Similarity=0.070 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-CCCCccceEEec
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAG 239 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~i~~~ 239 (328)
++.+|||+|||+|.++..+++.+. .|+++|+|+.+++.|++++...++ ...+.++|+.+.. ...+.||+|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~----~~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGL----RVDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC----CCEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCC----CCcEEEccHHHHHHHhcCCCCEEEEC
Confidence 488999999999999999999875 699999999999999999987763 2356688886532 213449999986
Q ss_pred ccccc---------CCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 240 AALHC---------WPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 240 ~vl~h---------~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
--... ..+...+++.+.++|||||++++.+...
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 33211 1123578899999999999999877543
No 245
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.20 E-value=3.2e-11 Score=107.09 Aligned_cols=118 Identities=12% Similarity=-0.020 Sum_probs=85.1
Q ss_pred ccccCCCeEEEEcCCc------CHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEE-EEecCCCCCC
Q 020307 157 FKSAQGGLLVDVSCGS------GLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLAL-VRADVCRLPF 228 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~------G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~-~~~d~~~lp~ 228 (328)
+...++.+|||+|||+ |. ..+++..+ ..+|+|+|+|+. + .++.+ +++|+.++++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------------~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------------SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------CSSSEEEESCGGGCCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------CCCEEEEECccccCCc
Confidence 3456788999999955 65 44454433 569999999987 1 15678 9999988776
Q ss_pred CCCccceEEecccccc--------C---CChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCH
Q 020307 229 ASGFVDAVHAGAALHC--------W---PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTE 297 (328)
Q Consensus 229 ~~~~fD~i~~~~vl~h--------~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (328)
. ++||+|+++...+. . .....+++++.++|||||++++..+... ..
T Consensus 121 ~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~----------------------~~ 177 (290)
T 2xyq_A 121 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------------------WN 177 (290)
T ss_dssp S-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----------------------CC
T ss_pred c-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC----------------------CH
Confidence 4 68999998643221 1 1124789999999999999999764321 22
Q ss_pred HHHHHHHHHCCCeEEEEE
Q 020307 298 EEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 298 ~~l~~ll~~~Gf~~v~~~ 315 (328)
.++.+++++.||..++..
T Consensus 178 ~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 178 ADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCcEEEEE
Confidence 478889999999877644
No 246
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.20 E-value=3.2e-10 Score=106.80 Aligned_cols=104 Identities=15% Similarity=0.235 Sum_probs=80.5
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC----CCCCCCc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR----LPFASGF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~----lp~~~~~ 232 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++...+ ..++.|+.+|+.+ +++.+++
T Consensus 282 l~~~~~~~VLDlgcG~G~~~~~la~~~~--~V~gvD~s~~al~~A~~n~~~~~---~~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 282 LDVQPEDRVLDLFCGMGNFTLPLATQAA--SVVGVEGVPALVEKGQQNARLNG---LQNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp HTCCTTCEEEEESCTTTTTHHHHHTTSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCTTSCCSSSGGGTTC
T ss_pred hcCCCCCEEEECCCCCCHHHHHHHhhCC--EEEEEeCCHHHHHHHHHHHHHcC---CCceEEEECCHHHHhhhhhhhcCC
Confidence 4445678999999999999999998854 99999999999999999998766 4589999999976 3455678
Q ss_pred cceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 233 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
||+|++.---.- ...+++.+.+ ++|+++++++.
T Consensus 357 fD~Vv~dPPr~g---~~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 357 FDKVLLDPARAG---AAGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CSEEEECCCTTC---CHHHHHHHHH-HCCSEEEEEES
T ss_pred CCEEEECCCCcc---HHHHHHHHHh-cCCCeEEEEEC
Confidence 999998422111 1244555543 78988888755
No 247
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=3.2e-12 Score=114.80 Aligned_cols=103 Identities=15% Similarity=0.114 Sum_probs=74.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeC----CHHHHHHHHHHHHhcCcCCCCCeEEEEe-cCCCCCCCCCccc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF----SENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVD 234 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~----s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD 234 (328)
.++.+|||+|||+|.++..+++.+ +|+|+|+ ++.+++... ....+ .+++.++++ |+..+| .++||
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~---~V~gvD~~~~~~~~~~~~~~--~~~~~---~~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLK---NVREVKGLTKGGPGHEEPIP--MSTYG---WNLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTST---TEEEEEEECCCSTTSCCCCC--CCSTT---GGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcC---CEEEEeccccCchhHHHHHH--hhhcC---CCCeEEEeccccccCC--cCCCC
Confidence 467899999999999999999882 8999999 554332111 01100 257899998 888775 56899
Q ss_pred eEEeccccc---cCCChH---HHHHHHHhcccCCcEEEEEEecc
Q 020307 235 AVHAGAALH---CWPSPS---NAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 235 ~i~~~~vl~---h~~d~~---~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
+|++..++. +..+.. .+|+++.++|||||.+++..+..
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 999977653 222222 47899999999999999877654
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.16 E-value=1.9e-13 Score=119.23 Aligned_cols=105 Identities=11% Similarity=0.190 Sum_probs=81.9
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC-Cccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-GFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-~~fD~ 235 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++.. ..++.++.+|+.++++++ ++| .
T Consensus 25 ~~~~~~~~VLDiG~G~G~~~~~l~~~~~--~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~~~~~~f-~ 96 (245)
T 1yub_A 25 LNLKETDTVYEIGTGKGHLTTKLAKISK--QVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQFPNKQRY-K 96 (245)
T ss_dssp CCCCSSEEEEECSCCCSSCSHHHHHHSS--EEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTCCCSSEE-E
T ss_pred cCCCCCCEEEEEeCCCCHHHHHHHHhCC--eEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCcccCCCc-E
Confidence 4445678999999999999999999874 999999999999988876542 458999999999988763 678 5
Q ss_pred EEec-----------cccccCCChHHHH----HHHHhcccCCcEEEEEE
Q 020307 236 VHAG-----------AALHCWPSPSNAV----AEISRILRSGGVFVGTT 269 (328)
Q Consensus 236 i~~~-----------~vl~h~~d~~~~l----~~~~r~LkpgG~l~i~~ 269 (328)
|+++ .+++|..++...+ +.+.|+|||||.+++..
T Consensus 97 vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 97 IVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 5554 2234445555556 77999999999876644
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.13 E-value=5.4e-10 Score=104.81 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=79.2
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++...+ .. +.++.+|+.++.. . +||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~ng---l~-v~~~~~d~~~~~~-~-~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEINN---VD-AEFEVASDREVSV-K-GFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT---CC-EEEEECCTTTCCC-T-TCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcC---Cc-EEEEECChHHcCc-c-CCCEEEE
Confidence 34678999999999999999999865 99999999999999999988765 34 9999999988752 2 8999998
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
.-.-.. -...+++.+. .|+|||+++++.
T Consensus 360 dPPr~g--~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 360 DPPRAG--LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCCTTC--SCHHHHHHHH-HHCCSEEEEEES
T ss_pred cCCccc--hHHHHHHHHH-hcCCCcEEEEEC
Confidence 533111 1234566654 599999999865
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.13 E-value=4.7e-11 Score=107.06 Aligned_cols=99 Identities=19% Similarity=0.315 Sum_probs=73.2
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+ ..++.++.+|+.+++++ +||+|
T Consensus 38 ~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~~---~~~v~~~~~D~~~~~~~--~~D~V 110 (299)
T 2h1r_A 38 AKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYEG---YNNLEVYEGDAIKTVFP--KFDVC 110 (299)
T ss_dssp HCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHTT---CCCEEC----CCSSCCC--CCSEE
T ss_pred cCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcC---CCceEEEECchhhCCcc--cCCEE
Confidence 4455778999999999999999998865 99999999999999999887544 46899999999888753 89999
Q ss_pred EeccccccCCChH--HHH---------------HHHHhcccCCc
Q 020307 237 HAGAALHCWPSPS--NAV---------------AEISRILRSGG 263 (328)
Q Consensus 237 ~~~~vl~h~~d~~--~~l---------------~~~~r~LkpgG 263 (328)
+++-. .++..+. ..+ ..+.|+++++|
T Consensus 111 v~n~p-y~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 111 TANIP-YKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp EEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred EEcCC-cccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 98643 3333331 223 34668888877
No 251
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.10 E-value=1.2e-09 Score=98.17 Aligned_cols=113 Identities=12% Similarity=0.077 Sum_probs=84.5
Q ss_pred hccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC---C
Q 020307 156 YFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS---G 231 (328)
Q Consensus 156 ~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~---~ 231 (328)
.+...++.+|||+|||+|..+..+++. ++..+|+++|+++.+++.++++++..+ ..++.++.+|+..++... .
T Consensus 97 ~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g---~~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 97 LLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG---VSCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGSCTTCGGGT
T ss_pred HhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCeEEEEeCChHhcCccccccC
Confidence 355678899999999999999999886 345699999999999999999998876 458999999997765322 5
Q ss_pred ccceEEec------cccccCCC-----------h-------HHHHHHHHhcccCCcEEEEEEecc
Q 020307 232 FVDAVHAG------AALHCWPS-----------P-------SNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 232 ~fD~i~~~------~vl~h~~d-----------~-------~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
+||.|++. .++..-+| . ..+|+.+.++|+ ||+++.++-..
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 79999973 23322122 1 145777778887 99998887554
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.10 E-value=3e-10 Score=101.24 Aligned_cols=78 Identities=12% Similarity=0.265 Sum_probs=68.7
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.. ..++.++.+|+.++++++.+||+|
T Consensus 46 l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l~~~~~~~~fD~I 118 (295)
T 3gru_A 46 ANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDALKVDLNKLDFNKV 118 (295)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTTTSCGGGSCCSEE
T ss_pred cCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchhhCCcccCCccEE
Confidence 4456788999999999999999999865 999999999999999998874 568999999999988888889999
Q ss_pred Eeccc
Q 020307 237 HAGAA 241 (328)
Q Consensus 237 ~~~~v 241 (328)
+++..
T Consensus 119 v~NlP 123 (295)
T 3gru_A 119 VANLP 123 (295)
T ss_dssp EEECC
T ss_pred EEeCc
Confidence 97743
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.08 E-value=4.8e-10 Score=105.13 Aligned_cols=120 Identities=18% Similarity=0.207 Sum_probs=87.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
.++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.| .++.++++|+...+ ..++||+|++
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~~~D~~~~~-~~~~fD~Ii~ 104 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGILADFLLWE-PGEAFDLILG 104 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEEESCGGGCC-CSSCEEEEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEEeCChhhcC-ccCCCCEEEE
Confidence 356799999999999999999863 456999999999988665 26889999997765 3568999999
Q ss_pred cccc---c-------cCCCh-------------------HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhh
Q 020307 239 GAAL---H-------CWPSP-------------------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERIL 289 (328)
Q Consensus 239 ~~vl---~-------h~~d~-------------------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 289 (328)
+--. . |+.+. ..+++.+.++|+|||++++..+...-
T Consensus 105 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l--------------- 169 (421)
T 2ih2_A 105 NPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWL--------------- 169 (421)
T ss_dssp CCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGG---------------
T ss_pred CcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHh---------------
Confidence 5111 1 12221 15688999999999999999876320
Q ss_pred ccCCCCCHHHHHHHHHHCCCe
Q 020307 290 QNYNYLTEEEIEDLCTSCGLT 310 (328)
Q Consensus 290 ~~~~~~~~~~l~~ll~~~Gf~ 310 (328)
..-..+.+++.+.+.|+.
T Consensus 170 ---~~~~~~~lr~~l~~~~~~ 187 (421)
T 2ih2_A 170 ---VLEDFALLREFLAREGKT 187 (421)
T ss_dssp ---TCGGGHHHHHHHHHHSEE
T ss_pred ---cCccHHHHHHHHHhcCCe
Confidence 001235677777777773
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.07 E-value=2.5e-10 Score=105.97 Aligned_cols=111 Identities=12% Similarity=0.075 Sum_probs=85.1
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCC--------------------------------------ceEEEEeCCHHHHHH
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTY--------------------------------------SGVVALDFSENMLRQ 200 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~v~g~D~s~~~~~~ 200 (328)
..++..|||.+||+|.++..++..+.+ .+++|+|+|+.+++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 346789999999999999888876432 469999999999999
Q ss_pred HHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecccc-ccCC---ChHHHHHHHHhcccC--CcEEEEEEecc
Q 020307 201 CYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAAL-HCWP---SPSNAVAEISRILRS--GGVFVGTTFLR 272 (328)
Q Consensus 201 a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~vl-~h~~---d~~~~l~~~~r~Lkp--gG~l~i~~~~~ 272 (328)
|++++...++ ..++.+.++|+.+++.+ .+||+|+++--. +.+. +...+.+++.+.||+ ||.+++.+.+.
T Consensus 279 Ar~Na~~~gl--~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 279 AKQNAVEAGL--GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHHHHTTC--TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCT
T ss_pred HHHHHHHcCC--CCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 9999988774 45699999999988754 589999998321 1111 223456666677766 99999988643
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.05 E-value=4.2e-10 Score=106.45 Aligned_cols=115 Identities=16% Similarity=0.137 Sum_probs=88.8
Q ss_pred hhccccCCCeEEEEcCCcCHHHHHHHHhC-------------CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEe
Q 020307 155 EYFKSAQGGLLVDVSCGSGLFSRKFAKSG-------------TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA 221 (328)
Q Consensus 155 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~ 221 (328)
+.+...++.+|||.|||+|.++..+++.. ...+++|+|+++.+++.|+.++..++.. ..+..+.++
T Consensus 165 ~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~-~~~~~i~~g 243 (445)
T 2okc_A 165 DCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG-TDRSPIVCE 243 (445)
T ss_dssp HHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC-SSCCSEEEC
T ss_pred HHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC-cCCCCEeeC
Confidence 44555667899999999999998887642 2347999999999999999988766531 116788999
Q ss_pred cCCCCCCCCCccceEEeccccccCCCh-----------------HHHHHHHHhcccCCcEEEEEEec
Q 020307 222 DVCRLPFASGFVDAVHAGAALHCWPSP-----------------SNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 222 d~~~lp~~~~~fD~i~~~~vl~h~~d~-----------------~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
|....+.. .+||+|+++-.+.+.... ..+++.+.+.|||||++.++.+.
T Consensus 244 D~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 244 DSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp CTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 98776643 489999998555443211 37899999999999999998875
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.02 E-value=1.2e-09 Score=101.07 Aligned_cols=109 Identities=14% Similarity=0.095 Sum_probs=85.7
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCC--------------------------------------ceEEEEeCCHHHHHHH
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTY--------------------------------------SGVVALDFSENMLRQC 201 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~v~g~D~s~~~~~~a 201 (328)
.++..|||.+||+|.++..++..+.+ .+++|+|+|+.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 46789999999999999988875432 4699999999999999
Q ss_pred HHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecccc-ccCC---ChHHHHHHHHhcccC--CcEEEEEEec
Q 020307 202 YDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAAL-HCWP---SPSNAVAEISRILRS--GGVFVGTTFL 271 (328)
Q Consensus 202 ~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~vl-~h~~---d~~~~l~~~~r~Lkp--gG~l~i~~~~ 271 (328)
++++...++ ...+.+.++|+.+++.+ .+||+|+++--. +.+. +...+.+++.+.||+ ||.+++.++.
T Consensus 273 r~Na~~~gl--~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 273 RKNAREVGL--EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHHTTC--TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHHcCC--CCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 999998775 45799999999988754 489999997322 1232 234566777777776 9999998864
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.02 E-value=6.7e-10 Score=102.90 Aligned_cols=111 Identities=15% Similarity=0.130 Sum_probs=86.2
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCC--------------------------------------ceEEEEeCCHHHHHH
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTY--------------------------------------SGVVALDFSENMLRQ 200 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~v~g~D~s~~~~~~ 200 (328)
..++.+|||++||+|.++..++..+.+ .+|+|+|+|+.+++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 346789999999999999998876422 479999999999999
Q ss_pred HHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEeccccc-cC---CChHHHHHHHHhcccC--CcEEEEEEecc
Q 020307 201 CYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CW---PSPSNAVAEISRILRS--GGVFVGTTFLR 272 (328)
Q Consensus 201 a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~vl~-h~---~d~~~~l~~~~r~Lkp--gG~l~i~~~~~ 272 (328)
|+.++...++ ..++.+.++|+.+++.+ .+||+|+++--.. .+ .+...+.+++.++||+ |+.+++.+.+.
T Consensus 273 Ar~Na~~~gl--~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 273 ARENAEIAGV--DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHHHHTC--GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHHHHcCC--CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 9999988764 45799999999888754 5899999964422 22 1234567777778876 89998888643
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.01 E-value=6.5e-10 Score=100.90 Aligned_cols=111 Identities=13% Similarity=0.141 Sum_probs=82.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCc--CCC---CCeEEEEecCCCCCC----CC
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT--ILT---SNLALVRADVCRLPF----AS 230 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~--~~~---~~i~~~~~d~~~lp~----~~ 230 (328)
.++.+||+||||+|.+++.+++.++ .+|+++|+++.+++.|++.+...+. ... +++.++.+|+...-- ..
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 3578999999999999999998875 7899999999999999998753210 001 279999999865421 25
Q ss_pred CccceEEecccc-ccCCCh-----HHHHHHH----HhcccCCcEEEEEEec
Q 020307 231 GFVDAVHAGAAL-HCWPSP-----SNAVAEI----SRILRSGGVFVGTTFL 271 (328)
Q Consensus 231 ~~fD~i~~~~vl-~h~~d~-----~~~l~~~----~r~LkpgG~l~i~~~~ 271 (328)
++||+|++.-.- ..-..| ..+++.+ .++|+|||++++....
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 789999986432 111123 4566666 8999999999987644
No 259
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.00 E-value=4.8e-09 Score=96.31 Aligned_cols=148 Identities=14% Similarity=0.079 Sum_probs=99.2
Q ss_pred CCeEEEEcCCcCHHHHHHHHh-----------------CCCceEEEEeCC-----------HHHHHHHHHHHHhcCcCCC
Q 020307 162 GGLLVDVSCGSGLFSRKFAKS-----------------GTYSGVVALDFS-----------ENMLRQCYDFIKQDNTILT 213 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~g~D~s-----------~~~~~~a~~~~~~~~~~~~ 213 (328)
..+|+|+||++|.++..+... .|..+|+.-|+- +.+.+.+++. .+. .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~--~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGR--K 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCC--C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccC--C
Confidence 468999999999988877654 355788899986 4433333221 110 1
Q ss_pred CCeEEEEec---CCCCCCCCCccceEEeccccccCCChH---------------------------------------HH
Q 020307 214 SNLALVRAD---VCRLPFASGFVDAVHAGAALHCWPSPS---------------------------------------NA 251 (328)
Q Consensus 214 ~~i~~~~~d---~~~lp~~~~~fD~i~~~~vl~h~~d~~---------------------------------------~~ 251 (328)
.+..|+.+. +..-.|+++++|+|+++.+||++.+.. .+
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 234555554 334458899999999999999986542 12
Q ss_pred HHHHHhcccCCcEEEEEEeccCCC--Ccc---hhhHHHHH-------------hhhccCCCCCHHHHHHHHHHCC-CeEE
Q 020307 252 VAEISRILRSGGVFVGTTFLRYTS--STS---LTGRVLRE-------------RILQNYNYLTEEEIEDLCTSCG-LTNY 312 (328)
Q Consensus 252 l~~~~r~LkpgG~l~i~~~~~~~~--~~~---~~~~~~~~-------------~~~~~~~~~~~~~l~~ll~~~G-f~~v 312 (328)
|+...+.|+|||+++++...+.+. ... .+...+.. .......+.+.++++.++++.| |++.
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~ 287 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEIL 287 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEE
Confidence 666689999999999999887654 111 22333321 0113466789999999999985 6766
Q ss_pred EE
Q 020307 313 TS 314 (328)
Q Consensus 313 ~~ 314 (328)
..
T Consensus 288 ~l 289 (384)
T 2efj_A 288 YL 289 (384)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 260
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.98 E-value=7.1e-09 Score=95.09 Aligned_cols=155 Identities=12% Similarity=0.075 Sum_probs=100.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHH--------h-------CCCceEEEEeCCHHHHHHHHHHHHhcC-----------cC-CC
Q 020307 161 QGGLLVDVSCGSGLFSRKFAK--------S-------GTYSGVVALDFSENMLRQCYDFIKQDN-----------TI-LT 213 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~--------~-------~~~~~v~g~D~s~~~~~~a~~~~~~~~-----------~~-~~ 213 (328)
...+|+|+|||+|.++..+.. . .|..+|+.-|+-.+.....-+.+.... .. ..
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 357899999999998877722 2 156788999987665544433333210 00 00
Q ss_pred CCeEEEEecCCCCCCCCCccceEEeccccccCCCh--------------------------------------HHHHHHH
Q 020307 214 SNLALVRADVCRLPFASGFVDAVHAGAALHCWPSP--------------------------------------SNAVAEI 255 (328)
Q Consensus 214 ~~i~~~~~d~~~lp~~~~~fD~i~~~~vl~h~~d~--------------------------------------~~~l~~~ 255 (328)
.-+.-+.+.+..-.|++++||+|+++.+||++.+. ..+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222334454445789999999999999998732 3468889
Q ss_pred HhcccCCcEEEEEEeccCCCC--c---------chhhHHHHHh-------------hhccCCCCCHHHHHHHHH-HCCCe
Q 020307 256 SRILRSGGVFVGTTFLRYTSS--T---------SLTGRVLRER-------------ILQNYNYLTEEEIEDLCT-SCGLT 310 (328)
Q Consensus 256 ~r~LkpgG~l~i~~~~~~~~~--~---------~~~~~~~~~~-------------~~~~~~~~~~~~l~~ll~-~~Gf~ 310 (328)
++.|+|||+++++...+.+.. . ..+...+... ..-...+.+.++++.+++ ..||+
T Consensus 212 a~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~ 291 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFA 291 (374)
T ss_dssp HHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEE
T ss_pred HHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcE
Confidence 999999999999998775421 0 1111112210 123456788999999998 59998
Q ss_pred EEEEE
Q 020307 311 NYTSK 315 (328)
Q Consensus 311 ~v~~~ 315 (328)
+....
T Consensus 292 I~~le 296 (374)
T 3b5i_A 292 IDKLV 296 (374)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77643
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.94 E-value=1.8e-09 Score=94.24 Aligned_cols=74 Identities=14% Similarity=0.256 Sum_probs=62.7
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC----Cc
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS----GF 232 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~----~~ 232 (328)
+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++.. ..++.++.+|+.++++++ ++
T Consensus 25 ~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~~~~~~~~~~~~ 97 (255)
T 3tqs_A 25 IHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQFDFSSVKTDKP 97 (255)
T ss_dssp HCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTTCCGGGSCCSSC
T ss_pred cCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHhCCHHHhccCCC
Confidence 4556788999999999999999999874 999999999999999998764 468999999999887643 46
Q ss_pred cceEEe
Q 020307 233 VDAVHA 238 (328)
Q Consensus 233 fD~i~~ 238 (328)
|| |++
T Consensus 98 ~~-vv~ 102 (255)
T 3tqs_A 98 LR-VVG 102 (255)
T ss_dssp EE-EEE
T ss_pred eE-EEe
Confidence 88 444
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.94 E-value=1.3e-09 Score=100.50 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc---------------CcCCCCCeEEEEecCCC
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD---------------NTILTSNLALVRADVCR 225 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~---------------~~~~~~~i~~~~~d~~~ 225 (328)
++.+|||+|||+|.++..++...+..+|+++|+++.+++.++++++.. + ..++.++++|+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g---l~~i~v~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG---EKTIVINHDDANR 123 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES---SSEEEEEESCHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC---CCceEEEcCcHHH
Confidence 578999999999999999999854568999999999999999999876 5 2348999999865
Q ss_pred CCC-CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 226 LPF-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 226 lp~-~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
+.. ..++||+|++.- ...+..++..+.+.|||||+++++.
T Consensus 124 ~~~~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 LMAERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 431 135799999532 2245788999999999999887765
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.94 E-value=1.2e-09 Score=100.89 Aligned_cols=97 Identities=15% Similarity=0.257 Sum_probs=77.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CCC---------
Q 020307 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FAS--------- 230 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~--------- 230 (328)
+.+|||+|||+|.++..+++... +|+|+|+|+.+++.|+++++..+ ..++.++.+|+.++. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~ng---~~~v~~~~~d~~~~~~~~~~~~~~~~l~~ 288 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAANH---IDNVQIIRMAAEEFTQAMNGVREFNRLQG 288 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHTT---CCSEEEECCCSHHHHHHHSSCCCCTTGGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcC---CCceEEEECCHHHHHHHHhhccccccccc
Confidence 57899999999999999998654 99999999999999999998766 458999999986542 111
Q ss_pred -----CccceEEeccccccCCChH--HHHHHHHhcccCCcEEEEEEec
Q 020307 231 -----GFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 231 -----~~fD~i~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
.+||+|++. |. .+..++.+.|+++|++++...+
T Consensus 289 ~~~~~~~fD~Vv~d--------PPr~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 289 IDLKSYQCETIFVD--------PPRSGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp SCGGGCCEEEEEEC--------CCTTCCCHHHHHHHTTSSEEEEEESC
T ss_pred cccccCCCCEEEEC--------cCccccHHHHHHHHhCCCEEEEEECC
Confidence 379999863 32 2356677788899988887743
No 264
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.90 E-value=3e-09 Score=98.32 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=83.2
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHhcCcCCCCC-eEEEEecCCCCC--CCCCccce
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSN-LALVRADVCRLP--FASGFVDA 235 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~-i~~~~~d~~~lp--~~~~~fD~ 235 (328)
.++.+|||++||+|.++..++....+ .+|+++|+++.+++.++++++..++ ..+ +.++.+|+..+- ...+.||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl--~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI--PEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 35789999999999999999986433 4899999999999999999998764 334 899999985431 12457999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
|++.- ...+..++..+.+.|+|||+++++.
T Consensus 129 V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99864 2335678999999999999887766
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.88 E-value=3.6e-09 Score=93.07 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=63.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCC-ccce
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG-FVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~-~fD~ 235 (328)
+...++ +|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++. ..++.++.+|+.++++++. .+|.
T Consensus 43 ~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~------~~~v~vi~~D~l~~~~~~~~~~~~ 113 (271)
T 3fut_A 43 ARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLS------GLPVRLVFQDALLYPWEEVPQGSL 113 (271)
T ss_dssp HCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTT------TSSEEEEESCGGGSCGGGSCTTEE
T ss_pred cCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcC------CCCEEEEECChhhCChhhccCccE
Confidence 445667 999999999999999999875 99999999999999998764 2479999999988877543 6888
Q ss_pred EEecc
Q 020307 236 VHAGA 240 (328)
Q Consensus 236 i~~~~ 240 (328)
|+++-
T Consensus 114 iv~Nl 118 (271)
T 3fut_A 114 LVANL 118 (271)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 87764
No 266
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.86 E-value=2.9e-09 Score=95.15 Aligned_cols=80 Identities=16% Similarity=0.281 Sum_probs=67.2
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CCC---C
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FAS---G 231 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~---~ 231 (328)
+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|++++... ..++.++++|+.+++ +.+ +
T Consensus 22 L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~----g~~v~~v~~d~~~l~~~l~~~g~~ 97 (301)
T 1m6y_A 22 LKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF----SDRVSLFKVSYREADFLLKTLGIE 97 (301)
T ss_dssp HCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG----TTTEEEEECCGGGHHHHHHHTTCS
T ss_pred cCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEECCHHHHHHHHHhcCCC
Confidence 5556788999999999999999999876679999999999999999988764 258999999998875 221 5
Q ss_pred ccceEEecc
Q 020307 232 FVDAVHAGA 240 (328)
Q Consensus 232 ~fD~i~~~~ 240 (328)
+||.|++..
T Consensus 98 ~~D~Vl~D~ 106 (301)
T 1m6y_A 98 KVDGILMDL 106 (301)
T ss_dssp CEEEEEEEC
T ss_pred CCCEEEEcC
Confidence 799999754
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.86 E-value=2.8e-09 Score=93.25 Aligned_cols=83 Identities=18% Similarity=0.161 Sum_probs=64.9
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCH-------HHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-C
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSE-------NMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-F 228 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~-------~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-~ 228 (328)
...++.+|||+|||+|.++..+++.+. +|+|+|+|+ .+++.|+++.+..++ ..++.++++|+.++ + +
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~--~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQDT--AARINLHFGNAAEQMPAL 155 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHHHH--HTTEEEEESCHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhhCC--ccCeEEEECCHHHHHHhh
Confidence 334578999999999999999999864 999999999 999999887665442 23599999998763 3 3
Q ss_pred CC--CccceEEecccccc
Q 020307 229 AS--GFVDAVHAGAALHC 244 (328)
Q Consensus 229 ~~--~~fD~i~~~~vl~h 244 (328)
++ ++||+|++.-.+.|
T Consensus 156 ~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHCCCSEEEECCCC--
T ss_pred hccCCCccEEEECCCCCC
Confidence 33 68999999766554
No 268
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.82 E-value=5.4e-09 Score=91.31 Aligned_cols=141 Identities=16% Similarity=0.061 Sum_probs=90.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHh-------CCC-----ceEEEEeCCH---HHHH-----------HHHHHHHhcC-----
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKS-------GTY-----SGVVALDFSE---NMLR-----------QCYDFIKQDN----- 209 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~-------~~~-----~~v~g~D~s~---~~~~-----------~a~~~~~~~~----- 209 (328)
+..+|||+|+|+|..+..+.+. .|. .+++++|..+ +.+. .+++.+....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988776553 453 5899999876 4444 4555544310
Q ss_pred -----cC-CCCCeEEEEecCCC-CCCCC----CccceEEecc-ccccCCC--hHHHHHHHHhcccCCcEEEEEEeccCCC
Q 020307 210 -----TI-LTSNLALVRADVCR-LPFAS----GFVDAVHAGA-ALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYTS 275 (328)
Q Consensus 210 -----~~-~~~~i~~~~~d~~~-lp~~~----~~fD~i~~~~-vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 275 (328)
+. ...++.++.+|+.+ ++..+ ..||+|+... .-..-++ -..+++.+.++|||||+|+..+ .
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys--a--- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT--S--- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC--C---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe--C---
Confidence 00 12467889999855 44222 2799999853 2111122 2578999999999999988522 1
Q ss_pred CcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEEeC-cEEEEEEeC
Q 020307 276 STSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKVQQ-SFIMFAAQK 327 (328)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~-~~~~~~a~k 327 (328)
...+++.|..+||++.+....+ .--++.+.|
T Consensus 215 ---------------------a~~vrr~L~~aGF~v~~~~g~~~kr~m~~a~~ 246 (257)
T 2qy6_A 215 ---------------------AGFVRRGLQEAGFTMQKRKGFGRKREMLCGVM 246 (257)
T ss_dssp ---------------------BHHHHHHHHHHTEEEEEECCSTTCCCEEEEEE
T ss_pred ---------------------CHHHHHHHHHCCCEEEeCCCCCCCCceEEEEe
Confidence 1257788999999977643322 224444443
No 269
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.79 E-value=1.5e-08 Score=92.24 Aligned_cols=151 Identities=13% Similarity=0.089 Sum_probs=103.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHh----------------CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEE---e
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKS----------------GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR---A 221 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~----------------~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~---~ 221 (328)
..-+|+|+||++|.++..+... .|..+|+.-|...+.....-+.+..... ..+..|+. +
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~--~~~~~f~~gvpg 128 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND--VDGVCFINGVPG 128 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS--CTTCEEEEEEES
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc--cCCCEEEEecch
Confidence 3468999999999876554332 3567899999988888777665543110 11234444 4
Q ss_pred cCCCCCCCCCccceEEeccccccCCChH---------------------------------HHHHHHHhcccCCcEEEEE
Q 020307 222 DVCRLPFASGFVDAVHAGAALHCWPSPS---------------------------------NAVAEISRILRSGGVFVGT 268 (328)
Q Consensus 222 d~~~lp~~~~~fD~i~~~~vl~h~~d~~---------------------------------~~l~~~~r~LkpgG~l~i~ 268 (328)
.+..-.|+++++|+|+++.+||++.+.. .+|+...+.|+|||+++++
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 4555568899999999999999986421 3488899999999999999
Q ss_pred EeccCCCC---------cchhhHHHHHh-------------hhccCCCCCHHHHHHHHHHCCC-eEEE
Q 020307 269 TFLRYTSS---------TSLTGRVLRER-------------ILQNYNYLTEEEIEDLCTSCGL-TNYT 313 (328)
Q Consensus 269 ~~~~~~~~---------~~~~~~~~~~~-------------~~~~~~~~~~~~l~~ll~~~Gf-~~v~ 313 (328)
...+.+.. ...+...|... ......+.+.++++.++++.|. ++..
T Consensus 209 ~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~ 276 (359)
T 1m6e_X 209 ILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDH 276 (359)
T ss_dssp EEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEE
T ss_pred EecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEE
Confidence 98775431 11223333211 1235568889999999999966 5544
No 270
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.78 E-value=6.6e-08 Score=85.44 Aligned_cols=113 Identities=15% Similarity=0.252 Sum_probs=87.2
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCCC-CCCCCccce
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PFASGFVDA 235 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p~~~~~fD~ 235 (328)
.+..++||-||.|.|..++.+.+..+..+++.+|+++.+++.+++.+... +....+++.++.+|.... .-..++||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 34578999999999999999999866679999999999999999987531 212268999999998653 344678999
Q ss_pred EEeccccccCC----ChHHHHHHHHhcccCCcEEEEEEec
Q 020307 236 VHAGAALHCWP----SPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 236 i~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
|+....=..-+ -...+++.+.+.|+|||+++....+
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 99754211000 0147899999999999999987644
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.77 E-value=1.1e-08 Score=98.72 Aligned_cols=115 Identities=10% Similarity=0.003 Sum_probs=86.4
Q ss_pred hhccccCCCeEEEEcCCcCHHHHHHHHhCC------------------CceEEEEeCCHHHHHHHHHHHHhcCcCCCCC-
Q 020307 155 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGT------------------YSGVVALDFSENMLRQCYDFIKQDNTILTSN- 215 (328)
Q Consensus 155 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~------------------~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~- 215 (328)
+.+...++.+|||.+||+|.++..+.+... ...++|+|+++.+++.|+.++..++. ..
T Consensus 163 ~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi---~~~ 239 (541)
T 2ar0_A 163 HLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI---EGN 239 (541)
T ss_dssp HHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC---CCB
T ss_pred HHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC---Ccc
Confidence 344556678999999999999988876410 13799999999999999998876653 22
Q ss_pred ----eEEEEecCCCCC-CCCCccceEEeccccccCCC--------------hHHHHHHHHhcccCCcEEEEEEecc
Q 020307 216 ----LALVRADVCRLP-FASGFVDAVHAGAALHCWPS--------------PSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 216 ----i~~~~~d~~~lp-~~~~~fD~i~~~~vl~h~~d--------------~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
..+.++|....+ ...++||+|+++--+..... ...++..+.+.|||||++.++.|..
T Consensus 240 ~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 240 LDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp GGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred ccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 778899986543 34578999999744332211 1368999999999999999988753
No 272
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.73 E-value=3.7e-08 Score=97.93 Aligned_cols=111 Identities=17% Similarity=0.124 Sum_probs=81.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhC------------------------------------------CCceEEEEeCCHHH
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSG------------------------------------------TYSGVVALDFSENM 197 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~------------------------------------------~~~~v~g~D~s~~~ 197 (328)
.++..|||.+||+|.++..++..+ +..+++|+|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 467799999999999998887642 12479999999999
Q ss_pred HHHHHHHHHhcCcCCCCCeEEEEecCCCC--CCCCCccceEEecccc-ccCCC---hHHHHH---HHHhcccCCcEEEEE
Q 020307 198 LRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHAGAAL-HCWPS---PSNAVA---EISRILRSGGVFVGT 268 (328)
Q Consensus 198 ~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~i~~~~vl-~h~~d---~~~~l~---~~~r~LkpgG~l~i~ 268 (328)
++.|+.++...++ ...+.+.++|+.++ |...++||+|+++--. +.+.+ ...+.+ ++.+.+.|||.+++.
T Consensus 269 v~~A~~N~~~agv--~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 269 IQRARTNARLAGI--GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHHTTC--GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHcCC--CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 9999999998875 44699999999876 3334489999998221 11222 233344 444455689999998
Q ss_pred Eecc
Q 020307 269 TFLR 272 (328)
Q Consensus 269 ~~~~ 272 (328)
+++.
T Consensus 347 t~~~ 350 (703)
T 3v97_A 347 SASP 350 (703)
T ss_dssp ESCH
T ss_pred eCCH
Confidence 8754
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.69 E-value=5.8e-08 Score=84.45 Aligned_cols=81 Identities=15% Similarity=0.279 Sum_probs=61.6
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.++++ . ..++.++.+|+.++++++..-+.+
T Consensus 27 ~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~--~-----~~~v~~i~~D~~~~~~~~~~~~~~ 98 (249)
T 3ftd_A 27 LNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI--G-----DERLEVINEDASKFPFCSLGKELK 98 (249)
T ss_dssp TTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS--C-----CTTEEEECSCTTTCCGGGSCSSEE
T ss_pred cCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc--c-----CCCeEEEEcchhhCChhHccCCcE
Confidence 445578899999999999999999984 35999999999999999875 2 458999999999988764221334
Q ss_pred EeccccccC
Q 020307 237 HAGAALHCW 245 (328)
Q Consensus 237 ~~~~vl~h~ 245 (328)
+..+.-.++
T Consensus 99 vv~NlPy~i 107 (249)
T 3ftd_A 99 VVGNLPYNV 107 (249)
T ss_dssp EEEECCTTT
T ss_pred EEEECchhc
Confidence 444433443
No 274
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.67 E-value=3.4e-08 Score=85.68 Aligned_cols=107 Identities=14% Similarity=0.166 Sum_probs=73.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+|||+|.|+..+++..+...+.|+|++.++...... .... ..++.....+++...+..+.||+|++.
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~---~~~~--g~~ii~~~~~~dv~~l~~~~~DlVlsD 147 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN---VQSL--GWNIITFKDKTDIHRLEPVKCDTLLCD 147 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC---CCBT--TGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc---cCcC--CCCeEEEeccceehhcCCCCccEEEec
Confidence 46779999999999999998877444578889987543100000 0000 115556677665556778899999998
Q ss_pred cccccCCChH-------HHHHHHHhcccCC-cEEEEEEecc
Q 020307 240 AALHCWPSPS-------NAVAEISRILRSG-GVFVGTTFLR 272 (328)
Q Consensus 240 ~vl~h~~d~~-------~~l~~~~r~Lkpg-G~l~i~~~~~ 272 (328)
.+.+ ..... .+|+.+.++|||| |.+++-.+..
T Consensus 148 ~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 148 IGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp CCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 7655 43321 3468889999999 9999988764
No 275
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.66 E-value=3.6e-08 Score=87.10 Aligned_cols=67 Identities=16% Similarity=0.262 Sum_probs=56.1
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCC--ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTY--SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 230 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 230 (328)
+...++.+|||||||+|.++..|++.+.. .+|+|+|+|+.+++.++++. ..++.++++|+.++++++
T Consensus 38 ~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-------~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 38 IRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-------GELLELHAGDALTFDFGS 106 (279)
T ss_dssp HCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-------GGGEEEEESCGGGCCGGG
T ss_pred cCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-------CCCcEEEECChhcCChhH
Confidence 45567889999999999999999998651 23999999999999999873 237999999999887653
No 276
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.66 E-value=3.5e-07 Score=76.47 Aligned_cols=101 Identities=9% Similarity=0.051 Sum_probs=75.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC--------------
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-------------- 226 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-------------- 226 (328)
+.++|||+|| |+.+..+++. ++.+|+.+|.+++..+.|++.++..++....++.++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECc--hHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 4679999998 5677777775 2569999999999999999999886521124799999997432
Q ss_pred -C--------C-CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 227 -P--------F-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 227 -p--------~-~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
+ . ..++||+|+...- .....+..+.+.|+|||++++-.
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 2378999998763 22366677789999999996644
No 277
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.66 E-value=8.2e-08 Score=93.41 Aligned_cols=101 Identities=13% Similarity=0.115 Sum_probs=73.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHH---hC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAK---SG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~---~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
+...|||||||+|-+....++ .+ -..+|+++|-|+ +...+++....+++ ..+|+++.+|++++..+ +++|+|
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~--~dkVtVI~gd~eev~LP-EKVDII 432 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW--GSQVTVVSSDMREWVAP-EKADII 432 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT--GGGEEEEESCTTTCCCS-SCEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC--CCeEEEEeCcceeccCC-cccCEE
Confidence 345799999999988444433 32 223689999997 56677777777765 77899999999988765 579999
Q ss_pred Eeccc---cccCCChHHHHHHHHhcccCCcEEE
Q 020307 237 HAGAA---LHCWPSPSNAVAEISRILRSGGVFV 266 (328)
Q Consensus 237 ~~~~v---l~h~~d~~~~l~~~~r~LkpgG~l~ 266 (328)
++-+. +-+-.-| ..|....|.|||||+++
T Consensus 433 VSEwMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 433 VSELLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred EEEcCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 97432 1111223 57888899999999863
No 278
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.63 E-value=3.2e-08 Score=91.74 Aligned_cols=74 Identities=12% Similarity=0.159 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc--CcCCCCCeEEEEecCCCC-CC-CCCccceE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PF-ASGFVDAV 236 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p~-~~~~fD~i 236 (328)
++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|++++... + ..++.++++|+.+. +. ++++||+|
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~g---l~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNE---GKDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCT---TCEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccC---CCcEEEEECcHHHhhhhccCCCceEE
Confidence 478999999999999999998865 9999999999999999999875 4 35799999999764 32 23589999
Q ss_pred Eec
Q 020307 237 HAG 239 (328)
Q Consensus 237 ~~~ 239 (328)
++.
T Consensus 168 ~lD 170 (410)
T 3ll7_A 168 YVD 170 (410)
T ss_dssp EEC
T ss_pred EEC
Confidence 985
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.61 E-value=6.1e-07 Score=86.37 Aligned_cols=113 Identities=15% Similarity=0.036 Sum_probs=85.6
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhC---CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC--C-CCCCc
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSG---TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--P-FASGF 232 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p-~~~~~ 232 (328)
..++.+|||.+||+|.++..+.+.. ....++|+|+++.++..|+.++..++.. ..++.+.++|.... | .....
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-~~~~~I~~gDtL~~d~p~~~~~~ 297 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP-IENQFLHNADTLDEDWPTQEPTN 297 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC-GGGEEEEESCTTTSCSCCSSCCC
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC-cCccceEecceeccccccccccc
Confidence 3467899999999999998888762 2458999999999999999988776531 14678999998655 4 45678
Q ss_pred cceEEecccc--cc-----------------CC---Ch-HHHHHHHHhccc-CCcEEEEEEecc
Q 020307 233 VDAVHAGAAL--HC-----------------WP---SP-SNAVAEISRILR-SGGVFVGTTFLR 272 (328)
Q Consensus 233 fD~i~~~~vl--~h-----------------~~---d~-~~~l~~~~r~Lk-pgG~l~i~~~~~ 272 (328)
||+|+++=-+ .. ++ +. -.++..+.+.|| |||++.++.|..
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 9999986111 00 11 11 247999999999 999999988753
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.59 E-value=1.5e-07 Score=90.77 Aligned_cols=115 Identities=15% Similarity=0.008 Sum_probs=82.6
Q ss_pred hhccccCCCeEEEEcCCcCHHHHHHHHhCC---------------CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEE
Q 020307 155 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGT---------------YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 219 (328)
Q Consensus 155 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~---------------~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~ 219 (328)
+.+...++ +|||.+||+|.++..+.+... ...++|+|+++.+++.|+.++..+++ ..++.+.
T Consensus 239 ~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi--~~~i~i~ 315 (544)
T 3khk_A 239 EMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI--DFNFGKK 315 (544)
T ss_dssp HHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC--CCBCCSS
T ss_pred HHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC--Cccccee
Confidence 34444444 999999999999887754311 34799999999999999998877664 3344447
Q ss_pred EecCCCCC-CCCCccceEEecccccc-------------------------CCC---h-HHHHHHHHhcccCCcEEEEEE
Q 020307 220 RADVCRLP-FASGFVDAVHAGAALHC-------------------------WPS---P-SNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 220 ~~d~~~lp-~~~~~fD~i~~~~vl~h-------------------------~~d---~-~~~l~~~~r~LkpgG~l~i~~ 269 (328)
++|....+ +...+||+|+++=-+.. ++. . -.++..+.+.|||||++.++.
T Consensus 316 ~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 316 NADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp SCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 78865444 45678999999622211 111 1 268999999999999999988
Q ss_pred ecc
Q 020307 270 FLR 272 (328)
Q Consensus 270 ~~~ 272 (328)
|+.
T Consensus 396 P~g 398 (544)
T 3khk_A 396 ANG 398 (544)
T ss_dssp ETH
T ss_pred cch
Confidence 753
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.58 E-value=1.1e-07 Score=92.42 Aligned_cols=101 Identities=10% Similarity=0.099 Sum_probs=72.5
Q ss_pred CCeEEEEcCCcCHHHHHHHH----hC---------CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC
Q 020307 162 GGLLVDVSCGSGLFSRKFAK----SG---------TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 228 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~----~~---------~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 228 (328)
+..|||||||+|-++....+ .+ ...+|+++|.|+.+....+.+.. .++ ...|.++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~--~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW--KRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT--TTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC--CCeEEEEeCchhhccc
Confidence 45899999999998643222 12 23489999999987766665544 343 5679999999998765
Q ss_pred C-----CCccceEEeccccccCCCh---HHHHHHHHhcccCCcEEE
Q 020307 229 A-----SGFVDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFV 266 (328)
Q Consensus 229 ~-----~~~fD~i~~~~vl~h~~d~---~~~l~~~~r~LkpgG~l~ 266 (328)
+ .+++|+|++-.. ..+.+- ...|..+.+.|||||+++
T Consensus 487 p~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 468999998553 223222 357888899999999764
No 282
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.58 E-value=2.2e-08 Score=87.29 Aligned_cols=66 Identities=9% Similarity=0.218 Sum_probs=52.9
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 229 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 229 (328)
+...++.+|||||||+|.++. +.+ +...+|+|+|+++.+++.+++++.. ..++.++.+|+.+++++
T Consensus 17 ~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~-----~~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 17 INPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL-----GPKLTIYQQDAMTFNFG 82 (252)
T ss_dssp HCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT-----GGGEEEECSCGGGCCHH
T ss_pred cCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc-----CCceEEEECchhhCCHH
Confidence 445677899999999999999 654 4422399999999999999886543 34799999999888754
No 283
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.57 E-value=4.6e-08 Score=85.31 Aligned_cols=105 Identities=17% Similarity=0.034 Sum_probs=70.1
Q ss_pred hccccCC--CeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcC----cCC--CCCeEEEEecCCC-C
Q 020307 156 YFKSAQG--GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN----TIL--TSNLALVRADVCR-L 226 (328)
Q Consensus 156 ~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~----~~~--~~~i~~~~~d~~~-l 226 (328)
.+...++ .+|||+|||+|..+..++..+. +|+++|+++.+.+.+++.++... ... ..++.++++|..+ +
T Consensus 81 al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L 158 (258)
T 2oyr_A 81 AVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTAL 158 (258)
T ss_dssp HTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHS
T ss_pred HhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHH
Confidence 3444556 8999999999999999999865 89999999988777666554211 000 1468999999865 3
Q ss_pred CCCCCccceEEeccccccCCChHHHHHHHHhcccCCc
Q 020307 227 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 263 (328)
Q Consensus 227 p~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG 263 (328)
+...++||+|++.-...+ ......+++..++|++.+
T Consensus 159 ~~~~~~fDvV~lDP~y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 159 TDITPRPQVVYLDPMFPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp TTCSSCCSEEEECCCCCC-CCC-----HHHHHHHHHS
T ss_pred HhCcccCCEEEEcCCCCC-cccchHHHHHHHHHHHhh
Confidence 322247999999876655 333345566666666544
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.51 E-value=2.6e-06 Score=77.30 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=85.7
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..+|.++||+||++|.++..+.+++. .|++||+.+ +...... .+++.++++|+.....+.+.||+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~-l~~~l~~---------~~~V~~~~~d~~~~~~~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGP-MAQSLMD---------TGQVTWLREDGFKFRPTRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSC-CCHHHHT---------TTCEEEECSCTTTCCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhh-cChhhcc---------CCCeEEEeCccccccCCCCCcCEEEE
Confidence 45789999999999999999999875 999999864 2222221 67999999999887767788999999
Q ss_pred ccccccCCChHHHHHHHHhcccCC---cEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeE
Q 020307 239 GAALHCWPSPSNAVAEISRILRSG---GVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTN 311 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~Lkpg---G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 311 (328)
..+ .+|...+..+.+.|..+ +.++..-.... .....+.. ..+.+...++..||..
T Consensus 277 Dm~----~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk-----~~~~~l~~---------~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 277 DMV----EKPAKVAALMAQWLVNGWCRETIFNLKLPMK-----KRYEEVSH---------NLAYIQAQLDEHGINA 334 (375)
T ss_dssp CCS----SCHHHHHHHHHHHHHTTSCSEEEEEEECCSS-----SHHHHHHH---------HHHHHHHHHHHTTCCE
T ss_pred cCC----CChHHhHHHHHHHHhccccceEEEEEEeccc-----chHHHHHH---------HHHHHHHHHHhcCcch
Confidence 765 45777777777777665 33333222111 00111111 1246778899999964
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.43 E-value=1.4e-06 Score=79.49 Aligned_cols=130 Identities=12% Similarity=0.034 Sum_probs=96.1
Q ss_pred hccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcC---CCCCeEEEEecCCCCC-CCCC
Q 020307 156 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI---LTSNLALVRADVCRLP-FASG 231 (328)
Q Consensus 156 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~---~~~~i~~~~~d~~~lp-~~~~ 231 (328)
.+...+|.+|||+.+|.|.=+.+++..+....++++|+++.-++..++++...+.. ...++.+...|...++ ...+
T Consensus 143 ~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~ 222 (359)
T 4fzv_A 143 ALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGD 222 (359)
T ss_dssp HHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTT
T ss_pred HhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccc
Confidence 36678899999999999999999998877678999999999999999888765421 1247888888887654 3457
Q ss_pred ccceEEec----c----ccccCCCh----------------HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHH
Q 020307 232 FVDAVHAG----A----ALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLR 285 (328)
Q Consensus 232 ~fD~i~~~----~----vl~h~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 285 (328)
.||.|++. . ++..-++. ..+|..+.+.|||||+|+.+|-......+..+...+.
T Consensus 223 ~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L 300 (359)
T 4fzv_A 223 TYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAI 300 (359)
T ss_dssp CEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHH
T ss_pred cCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHH
Confidence 89999963 2 22111111 2578889999999999999997766555554444433
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.40 E-value=1.3e-07 Score=82.12 Aligned_cols=108 Identities=17% Similarity=0.109 Sum_probs=72.0
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
..++.+|||+|||.|.|+..+++..+...|+|+|++..+...+... ... ..++.....+.....+....+|+|+|
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~----g~~ii~~~~~~dv~~l~~~~~DvVLS 162 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL----GWNLIRFKDKTDVFNMEVIPGDTLLC 162 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT----TGGGEEEECSCCGGGSCCCCCSEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC----CCceEEeeCCcchhhcCCCCcCEEEe
Confidence 3467799999999999999988765555789999986532211100 000 12333444333323345788999999
Q ss_pred ccccccCCChH-------HHHHHHHhcccCC--cEEEEEEecc
Q 020307 239 GAALHCWPSPS-------NAVAEISRILRSG--GVFVGTTFLR 272 (328)
Q Consensus 239 ~~vl~h~~d~~-------~~l~~~~r~Lkpg--G~l~i~~~~~ 272 (328)
..... ...+. .+|.-+.++|+|| |.|++-.+..
T Consensus 163 DmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 163 DIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp CCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred cCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 87765 44431 3567778999999 9999988763
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.35 E-value=1.9e-06 Score=85.16 Aligned_cols=112 Identities=14% Similarity=0.105 Sum_probs=76.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCC---CceEEEEeCCHHHHHHH--HHHHHhcCc-CCCCCeEEEEecCCCC-CCCCCcc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGT---YSGVVALDFSENMLRQC--YDFIKQDNT-ILTSNLALVRADVCRL-PFASGFV 233 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~---~~~v~g~D~s~~~~~~a--~~~~~~~~~-~~~~~i~~~~~d~~~l-p~~~~~f 233 (328)
++.+|||.|||+|.++..+++..+ ..+++|+|+++.+++.| +..+....+ .......+...|+... +...+.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 477999999999999999988753 35799999999999999 433322111 0012235555566542 2345789
Q ss_pred ceEEecccccc-CC---------------------------C-hHHHHHHHHhcccCCcEEEEEEecc
Q 020307 234 DAVHAGAALHC-WP---------------------------S-PSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 234 D~i~~~~vl~h-~~---------------------------d-~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
|+|+++=-.-. .. + ...+++.+.+.|+|||++.+..|..
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 99999632210 11 1 1246788999999999999999764
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.23 E-value=2.3e-06 Score=75.42 Aligned_cols=130 Identities=9% Similarity=0.074 Sum_probs=91.3
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhC-----CCceEEEEeCCHH--------------------------HHHHHHHHHHhc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSG-----TYSGVVALDFSEN--------------------------MLRQCYDFIKQD 208 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~g~D~s~~--------------------------~~~~a~~~~~~~ 208 (328)
...+.|||+|+..|..+..++... ++.+++++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 346799999999999888776542 3668999996421 466788888887
Q ss_pred CcCCCCCeEEEEecCCC-CC-CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHH
Q 020307 209 NTILTSNLALVRADVCR-LP-FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRE 286 (328)
Q Consensus 209 ~~~~~~~i~~~~~d~~~-lp-~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 286 (328)
++. ..++.++.+|+.+ +| ++.++||+|+...-.. ......|..+.+.|+|||++++-+... + . .
T Consensus 185 gl~-~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGGiIv~DD~~~------~-~----G 250 (282)
T 2wk1_A 185 DLL-DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGGYVIVDDYMM------C-P----P 250 (282)
T ss_dssp TCC-STTEEEEESCHHHHSTTCCCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEEEEEESSCTT------C-H----H
T ss_pred CCC-cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCEEEEEcCCCC------C-H----H
Confidence 641 2789999999843 44 3457899999876321 123577999999999999998855311 0 0 0
Q ss_pred hhhccCCCCCHHHHHHHHHHCCCeEE
Q 020307 287 RILQNYNYLTEEEIEDLCTSCGLTNY 312 (328)
Q Consensus 287 ~~~~~~~~~~~~~l~~ll~~~Gf~~v 312 (328)
...-+.+.+++.|+...
T Consensus 251 ---------~~~Av~Ef~~~~~i~~~ 267 (282)
T 2wk1_A 251 ---------CKDAVDEYRAKFDIADE 267 (282)
T ss_dssp ---------HHHHHHHHHHHTTCCSC
T ss_pred ---------HHHHHHHHHHhcCCceE
Confidence 13467777888887543
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.19 E-value=3.7e-06 Score=76.65 Aligned_cols=108 Identities=12% Similarity=0.146 Sum_probs=78.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcC-----cCCCCCeEEEEecCCCC----CCCCC
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN-----TILTSNLALVRADVCRL----PFASG 231 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~-----~~~~~~i~~~~~d~~~l----p~~~~ 231 (328)
++++||-||.|.|..++.+.+.. ..+++.+|+++.+++.+++.+.... .+..+++.++.+|.... +-..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcC-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 46899999999999999999875 4789999999999999999864311 00124688999997432 11346
Q ss_pred ccceEEecccccc-CCCh---------HHHHHHHHhcccCCcEEEEEE
Q 020307 232 FVDAVHAGAALHC-WPSP---------SNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 232 ~fD~i~~~~vl~h-~~d~---------~~~l~~~~r~LkpgG~l~i~~ 269 (328)
+||+|+....=.. -++| ..+++.+.+.|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 7999997532111 1222 357888999999999998765
No 290
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.15 E-value=2.2e-06 Score=74.89 Aligned_cols=107 Identities=12% Similarity=0.118 Sum_probs=69.0
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
.++.+|||+||++|.|+..+.+..+-..|+|+|+...+...... .... ..++.....+..-..+..+.+|+|++.
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~----~~~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTL----GWNIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBT----TGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cccc----CCceEEeecCceeeecCCCCcCEEeec
Confidence 46889999999999999999986444578999997542110000 0000 112333333222223446789999997
Q ss_pred cccccCCCh-------HHHHHHHHhcccCC-cEEEEEEecc
Q 020307 240 AALHCWPSP-------SNAVAEISRILRSG-GVFVGTTFLR 272 (328)
Q Consensus 240 ~vl~h~~d~-------~~~l~~~~r~Lkpg-G~l~i~~~~~ 272 (328)
..-. ...+ ..+|.-+.++|+|| |.|++-.+..
T Consensus 155 ~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~ 194 (300)
T 3eld_A 155 IGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAP 194 (300)
T ss_dssp CCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESST
T ss_pred CcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 6655 4443 24577778999999 9999988763
No 291
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=98.15 E-value=8.2e-07 Score=59.87 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=37.7
Q ss_pred cCcccccCCCchhhccCCCCccccccccCceeeCCCCccccCccceeeeeccc
Q 020307 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (328)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 110 (328)
.++++||.|+++|...... +.+.|+.|+..|++++|++.++...
T Consensus 8 LeiL~CP~ck~~L~~~~~~---------g~LvC~~c~~~YPI~dGIPvmL~~E 51 (67)
T 2jny_A 8 LEVLACPKDKGPLRYLESE---------QLLVNERLNLAYRIDDGIPVLLIDE 51 (67)
T ss_dssp TCCCBCTTTCCBCEEETTT---------TEEEETTTTEEEEEETTEECCCSSC
T ss_pred HHHhCCCCCCCcCeEeCCC---------CEEEcCCCCccccCCCCEeeeChhH
Confidence 4789999999998765432 6899999999999999999998763
No 292
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=98.12 E-value=9.5e-07 Score=59.83 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=37.6
Q ss_pred cCcccccCCCchhhccCCCCccccccccCceeeCCCCccccCccceeeeeccc
Q 020307 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (328)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 110 (328)
.++++||.|+++|...... +.+.|+.|+..|++++|++.++...
T Consensus 6 L~iL~CP~ck~~L~~~~~~---------~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2jr6_A 6 LDILVCPVTKGRLEYHQDK---------QELWSRQAKLAYPIKDGIPYMLENE 49 (68)
T ss_dssp SCCCBCSSSCCBCEEETTT---------TEEEETTTTEEEEEETTEECCCTTT
T ss_pred hhheECCCCCCcCeEeCCC---------CEEEcCCCCcEecCCCCeeeeChhh
Confidence 4789999999998765432 6899999999999999999998763
No 293
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.11 E-value=5e-07 Score=100.95 Aligned_cols=147 Identities=18% Similarity=0.165 Sum_probs=70.0
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCC-----CceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-CCCCCccc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGT-----YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVD 234 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~-----~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD 234 (328)
+..+|||||.|+|..+..+.+... ..+++..|+|+...+.++++++.. ++.....|.... ++..++||
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~yd 1313 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKAD 1313 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----CC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCcee
Confidence 467999999999987665544321 247899999998888887776532 222222233332 34566899
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 235 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
+|++.+++|-.++....|++++++|||||++++.+.......... ..++...........+.++|..+|+.+||..+..
T Consensus 1314 lvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~-~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~~~~~ 1392 (2512)
T 2vz8_A 1314 LLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEM-VGFLTSPEQGGRHLLSQDQWESLFAGASLHLVAL 1392 (2512)
T ss_dssp EEEEECC--------------------CCEEEEEEC---------------------------CTTTTSSTTTTEEEEEE
T ss_pred EEEEcccccccccHHHHHHHHHHhcCCCcEEEEEecccccccccc-ccccccccccCCcccCHHHHHHHHHhCCCceeee
Confidence 999999998888999999999999999999998775421100000 0011110001223567788889999999987764
No 294
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=98.11 E-value=1e-06 Score=60.07 Aligned_cols=44 Identities=16% Similarity=0.335 Sum_probs=37.8
Q ss_pred cCcccccCCCchhhccCCCCccccccccCceeeCCCCccccCccceeeeeccc
Q 020307 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (328)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 110 (328)
.++++||.|+++|...... +.+.|+.|+..|++++|++.++...
T Consensus 6 L~iL~CP~ck~~L~~~~~~---------~~LiC~~cg~~YPI~dGIPvmL~~E 49 (70)
T 2js4_A 6 LDILVCPVCKGRLEFQRAQ---------AELVCNADRLAFPVRDGVPIMLEAE 49 (70)
T ss_dssp CCCCBCTTTCCBEEEETTT---------TEEEETTTTEEEEEETTEECCCGGG
T ss_pred hhheECCCCCCcCEEeCCC---------CEEEcCCCCceecCCCCeeeeChhh
Confidence 4789999999998765432 6899999999999999999998873
No 295
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=98.09 E-value=9.2e-07 Score=59.91 Aligned_cols=44 Identities=18% Similarity=0.443 Sum_probs=37.6
Q ss_pred cCcccccCCCchhhccCCCCccccccccCceeeCCCCccccCccceeeeeccc
Q 020307 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (328)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 110 (328)
.++++||.|+++|..... .+.+.|+.|+..|++++|++.++...
T Consensus 6 L~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2hf1_A 6 LEILVCPLCKGPLVFDKS---------KDELICKGDRLAFPIKDGIPMMLESE 49 (68)
T ss_dssp EEECBCTTTCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCGGG
T ss_pred hhheECCCCCCcCeEeCC---------CCEEEcCCCCcEecCCCCeeeeChhh
Confidence 478999999999876543 26899999999999999999998763
No 296
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=98.09 E-value=1.1e-06 Score=59.66 Aligned_cols=44 Identities=20% Similarity=0.402 Sum_probs=37.5
Q ss_pred cCcccccCCCchhhccCCCCccccccccCceeeCCCCccccCccceeeeeccc
Q 020307 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (328)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 110 (328)
.+.++||.|+++|...... +.+.|+.|+..|++++|+..++...
T Consensus 6 LeiL~CP~ck~~L~~~~~~---------~~LiC~~cg~~YPI~dGIPvmL~~e 49 (69)
T 2pk7_A 6 LDILACPICKGPLKLSADK---------TELISKGAGLAYPIRDGIPVMLESE 49 (69)
T ss_dssp GGTCCCTTTCCCCEECTTS---------SEEEETTTTEEEEEETTEECCCGGG
T ss_pred HhheeCCCCCCcCeEeCCC---------CEEEcCCCCcEecCcCCeeeeChhh
Confidence 4789999999998764432 6899999999999999999998763
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.08 E-value=7.7e-06 Score=71.39 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=62.3
Q ss_pred hccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CCC
Q 020307 156 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FAS 230 (328)
Q Consensus 156 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~~ 230 (328)
.+...+++.+||.+||.|..+..+++. +.+|+|+|.++.+++.|++ +. ..++.++.+++.+++ ...
T Consensus 17 ~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~------~~rv~lv~~~f~~l~~~L~~~g~ 87 (285)
T 1wg8_A 17 LLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH------LPGLTVVQGNFRHLKRHLAALGV 87 (285)
T ss_dssp HHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC------CTTEEEEESCGGGHHHHHHHTTC
T ss_pred hhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc------cCCEEEEECCcchHHHHHHHcCC
Confidence 456678899999999999999999998 4599999999999999988 54 248999999998764 122
Q ss_pred CccceEEec
Q 020307 231 GFVDAVHAG 239 (328)
Q Consensus 231 ~~fD~i~~~ 239 (328)
+++|.|++.
T Consensus 88 ~~vDgIL~D 96 (285)
T 1wg8_A 88 ERVDGILAD 96 (285)
T ss_dssp SCEEEEEEE
T ss_pred CCcCEEEeC
Confidence 579999974
No 298
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.98 E-value=7e-06 Score=64.18 Aligned_cols=88 Identities=15% Similarity=0.126 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCcC-HHHHHHHH-hCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCC-CccceEE
Q 020307 161 QGGLLVDVSCGSG-LFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-GFVDAVH 237 (328)
Q Consensus 161 ~~~~vLDiGcG~G-~~~~~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-~~fD~i~ 237 (328)
++.+|||||||+| ..+..|++ .+. +|+++|+++..+ .+++.|+.+..... ..||+|.
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av------------------~~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHG------------------GIVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSST------------------TEECCCSSSCCHHHHTTEEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCcccc------------------ceEEccCCCCcccccCCcCEEE
Confidence 4579999999999 69999997 555 899999987543 27888987733211 4799998
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEEeccC
Q 020307 238 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 273 (328)
Q Consensus 238 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 273 (328)
+..- -++....+.++.+.+ |.-+++......
T Consensus 95 sirP---P~El~~~i~~lA~~v--~adliI~pL~~E 125 (153)
T 2k4m_A 95 SIRP---PAEIHSSLMRVADAV--GARLIIKPLTGE 125 (153)
T ss_dssp EESC---CTTTHHHHHHHHHHH--TCEEEEECBTTB
T ss_pred EcCC---CHHHHHHHHHHHHHc--CCCEEEEcCCCC
Confidence 7553 122334444444432 566777665443
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.88 E-value=8.3e-05 Score=64.74 Aligned_cols=107 Identities=15% Similarity=0.194 Sum_probs=73.9
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEe-cCCCCCCCCCccceEEe
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD~i~~ 238 (328)
.++.+|||+||++|.|+...+.......|+|+|+...-.+.= ....+.+ -.-+.+..+ |+..++. ..+|+|+|
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~---w~lV~~~~~~Dv~~l~~--~~~D~ivc 166 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYG---WNIVTMKSGVDVFYRPS--ECCDTLLC 166 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTT---GGGEEEECSCCTTSSCC--CCCSEEEE
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcC---CcceEEEeccCHhhCCC--CCCCEEEE
Confidence 467799999999999999887764445799999965411000 0000011 123777777 8777663 67999999
Q ss_pred ccccccCCChH-------HHHHHHHhcccCC-cEEEEEEeccC
Q 020307 239 GAALHCWPSPS-------NAVAEISRILRSG-GVFVGTTFLRY 273 (328)
Q Consensus 239 ~~vl~h~~d~~-------~~l~~~~r~Lkpg-G~l~i~~~~~~ 273 (328)
.-. +--++|. .+|.-+.+.|++| |-+++-.+..+
T Consensus 167 Dig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 167 DIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred ECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 877 7777764 3566667889998 88988887664
No 300
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.87 E-value=0.00019 Score=69.02 Aligned_cols=140 Identities=18% Similarity=0.163 Sum_probs=92.7
Q ss_pred hHHHHHHhhHHhhhhc----CCCCCcchh-----hhccccCCCeEEEEcCCcCHHHHHHHHh----C---------CCce
Q 020307 130 FVSFLYERGWRQNFNR----SGFPGPDEE-----EYFKSAQGGLLVDVSCGSGLFSRKFAKS----G---------TYSG 187 (328)
Q Consensus 130 ~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~---------~~~~ 187 (328)
.+...|+...++.... ..++.|... +.+.+.++.+|+|-+||+|.|+..+.+. . ....
T Consensus 177 ~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~ 256 (530)
T 3ufb_A 177 TLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESS 256 (530)
T ss_dssp HHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhh
Confidence 4455666655443211 124555443 5666777889999999999998776543 1 1236
Q ss_pred EEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC----CCCccceEEeccccc---------cCC------Ch
Q 020307 188 VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAVHAGAALH---------CWP------SP 248 (328)
Q Consensus 188 v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~~fD~i~~~~vl~---------h~~------d~ 248 (328)
++|+|+++.+...|+-++-.++ .....+..+|....|. ....||+|+++=-+. .++ +.
T Consensus 257 i~G~E~~~~~~~la~mNl~lhg---~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~ 333 (530)
T 3ufb_A 257 IFGGEAKSLPYLLVQMNLLLHG---LEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAET 333 (530)
T ss_dssp EEEECCSHHHHHHHHHHHHHHT---CSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBH
T ss_pred hhhhhccHHHHHHHHHHHHhcC---CccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchh
Confidence 9999999999999998776665 3445677788755442 235799999873321 111 11
Q ss_pred -HHHHHHHHhccc-------CCcEEEEEEecc
Q 020307 249 -SNAVAEISRILR-------SGGVFVGTTFLR 272 (328)
Q Consensus 249 -~~~l~~~~r~Lk-------pgG~l~i~~~~~ 272 (328)
..++..+.+.|| |||++.++.|..
T Consensus 334 ~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 334 AMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp HHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred HHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 246777888776 799999998753
No 301
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.82 E-value=0.00025 Score=64.00 Aligned_cols=152 Identities=13% Similarity=0.142 Sum_probs=101.4
Q ss_pred ccccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCc-----C-------------CCCCeEE
Q 020307 157 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT-----I-------------LTSNLAL 218 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~-----~-------------~~~~i~~ 218 (328)
+...+...|+.+|||.......+...+++..++-+|. ++.++.-++.+...+. . ...+..+
T Consensus 93 l~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 171 (334)
T 1rjd_A 93 LVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKL 171 (334)
T ss_dssp HHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEE
T ss_pred HHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEE
Confidence 4334567999999999998888887656667888887 7787777776665310 0 0367899
Q ss_pred EEecCCCCCC---------CCCccceEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCC-CCcch---hhHH
Q 020307 219 VRADVCRLPF---------ASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYT-SSTSL---TGRV 283 (328)
Q Consensus 219 ~~~d~~~lp~---------~~~~fD~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~---~~~~ 283 (328)
+.+|+.+... ..+...++++-.++.+++.. ..+++.+.+.. |+|.+++.+..... ...++ +...
T Consensus 172 v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~ 250 (334)
T 1rjd_A 172 AACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSN 250 (334)
T ss_dssp EECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHH
T ss_pred EecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHH
Confidence 9999976421 23457888888999998644 46777777766 78887766655431 11122 1122
Q ss_pred HHH-h-h--hccCCCCCHHHHHHHHHHCCCe
Q 020307 284 LRE-R-I--LQNYNYLTEEEIEDLCTSCGLT 310 (328)
Q Consensus 284 ~~~-~-~--~~~~~~~~~~~l~~ll~~~Gf~ 310 (328)
+.. . . .....+.+.++..+.|.++||+
T Consensus 251 l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 251 LKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred hhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 222 1 1 1223467999999999999997
No 302
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=97.81 E-value=8.7e-06 Score=52.91 Aligned_cols=42 Identities=26% Similarity=0.616 Sum_probs=36.1
Q ss_pred cCcccccCCCchhhccCCCCccccccccCceeeC--CCCccccCccceeeeeccc
Q 020307 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCR--KCDKTYSSKDNYLDLTVIS 110 (328)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~g~~~~~~~~ 110 (328)
.+.++||.|+++|.... +.+.|+ .|+..|++++|+..++...
T Consensus 8 L~iL~CP~c~~~L~~~~-----------~~L~C~~~~c~~~YPI~dGIPvlL~~e 51 (56)
T 2kpi_A 8 LEILACPACHAPLEERD-----------AELICTGQDCGLAYPVRDGIPVLLVDE 51 (56)
T ss_dssp TTSCCCSSSCSCEEEET-----------TEEEECSSSCCCEEEEETTEECCCTTT
T ss_pred HhheeCCCCCCcceecC-----------CEEEcCCcCCCcEEeeECCEeeeCHHH
Confidence 47899999999986643 689999 9999999999999998653
No 303
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.72 E-value=0.00018 Score=60.64 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=73.5
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEe-cCCCCCCCCCccceEE
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVDAVH 237 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD~i~ 237 (328)
..++.+|||+||++|.++...+.......|+|+|+-..-.+.= ......| -..+.|..+ |+..++ ..++|.|+
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~g---wn~v~fk~gvDv~~~~--~~~~Dtll 149 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYG---WNIVKLMSGKDVFYLP--PEKCDTLL 149 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTT---TTSEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcC---cCceEEEeccceeecC--CccccEEE
Confidence 3467899999999999999888775445799999965422100 0000111 256889998 976665 36799999
Q ss_pred eccccccCCChH-------HHHHHHHhcccCCcEEEEEEeccCC
Q 020307 238 AGAALHCWPSPS-------NAVAEISRILRSGGVFVGTTFLRYT 274 (328)
Q Consensus 238 ~~~vl~h~~d~~-------~~l~~~~r~LkpgG~l~i~~~~~~~ 274 (328)
|.-. +--++|. ++|.-+.+.|++ |-+++-....+.
T Consensus 150 cDIg-eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 150 CDIG-ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred EecC-CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 9765 3445553 356666788998 788887776653
No 304
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.70 E-value=2.8e-05 Score=66.55 Aligned_cols=104 Identities=19% Similarity=0.155 Sum_probs=65.1
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCe---EEEEe-cCCCCCCCCCccc
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNL---ALVRA-DVCRLPFASGFVD 234 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i---~~~~~-d~~~lp~~~~~fD 234 (328)
..++.+|||+||+.|.++..+++.-.-..|.|.++..+. . +..... ...++ .|.++ |+.+++ ...+|
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-----~~P~~~-~~~Gv~~i~~~~G~Df~~~~--~~~~D 141 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-----EEPMLM-QSYGWNIVTMKSGVDVFYKP--SEISD 141 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-----CCCCCC-CSTTGGGEEEECSCCGGGSC--CCCCS
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-----cCCCcc-cCCCceEEEeeccCCccCCC--CCCCC
Confidence 357899999999999999999987211234455544321 0 000000 00233 44446 987754 55899
Q ss_pred eEEeccccccCCChH-------HHHHHHHhcccCCc-EEEEEEecc
Q 020307 235 AVHAGAALHCWPSPS-------NAVAEISRILRSGG-VFVGTTFLR 272 (328)
Q Consensus 235 ~i~~~~vl~h~~d~~-------~~l~~~~r~LkpgG-~l~i~~~~~ 272 (328)
+|+|...=. ..++. .+|.-+.++|+||| .|++-.+..
T Consensus 142 vVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 142 TLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp EEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred EEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 999976543 33331 24666678999999 999988763
No 305
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=97.66 E-value=1.7e-05 Score=57.30 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=39.8
Q ss_pred cCcccccCCCchhhccCC------------------CCccccccccCceeeCCCCccccCccceeeeecc
Q 020307 58 GDLFSCPICYEPLIRKGP------------------TGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (328)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~------------------~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~ 109 (328)
+++++||.|++++..... .+.....+..+.+.|+.|+..||+++|++.++..
T Consensus 6 LdILaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~dGIPvmL~~ 75 (97)
T 2k5r_A 6 LHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPE 75 (97)
T ss_dssp CSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGG
T ss_pred hhheECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccCCCcccChH
Confidence 578999999998765322 1112334456789999999999999999999877
No 306
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.61 E-value=0.00012 Score=65.09 Aligned_cols=47 Identities=13% Similarity=0.207 Sum_probs=43.1
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 208 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~ 208 (328)
.++..|||++||+|..+..+++.+. +++|+|+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHh
Confidence 5788999999999999999999876 9999999999999999998764
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.43 E-value=0.00012 Score=65.34 Aligned_cols=80 Identities=18% Similarity=0.268 Sum_probs=63.9
Q ss_pred hhccccCCCeEEEEcCCcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--CC--
Q 020307 155 EYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FA-- 229 (328)
Q Consensus 155 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~-- 229 (328)
+.+...+++.++|..||.|..+..+++. ++..+|+|+|.++.+++.++ ++. ..++.++.+++.++. ++
T Consensus 51 ~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~------~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 51 NGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID------DPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp HHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC------CTTEEEEESCGGGHHHHHHHT
T ss_pred HhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc------CCcEEEEeCCHHHHHHHHHhc
Confidence 4566778999999999999999999987 67789999999999999884 431 468999999987763 11
Q ss_pred --CCccceEEeccc
Q 020307 230 --SGFVDAVHAGAA 241 (328)
Q Consensus 230 --~~~fD~i~~~~v 241 (328)
.+++|.|++...
T Consensus 124 g~~~~vDgILfDLG 137 (347)
T 3tka_A 124 DLIGKIDGILLDLG 137 (347)
T ss_dssp TCTTCEEEEEEECS
T ss_pred CCCCcccEEEECCc
Confidence 136999997643
No 308
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.40 E-value=0.0016 Score=57.62 Aligned_cols=139 Identities=12% Similarity=0.050 Sum_probs=81.7
Q ss_pred CCeEEEEcCCcCHHHHHH----HHhCCCc--eEEEEeCCH--------H-HHHHHHHHHHhcCc--CCCCCeEEEEecCC
Q 020307 162 GGLLVDVSCGSGLFSRKF----AKSGTYS--GVVALDFSE--------N-MLRQCYDFIKQDNT--ILTSNLALVRADVC 224 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l----~~~~~~~--~v~g~D~s~--------~-~~~~a~~~~~~~~~--~~~~~i~~~~~d~~ 224 (328)
.-+|||+|=|+|.+.... .+..+.. +++.+|..+ . ..+........... .....+.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 458999999999865332 2335543 456666421 1 11111111111000 00224567778874
Q ss_pred C-CC-CCCCccceEEeccccccCCCh----HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHH
Q 020307 225 R-LP-FASGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEE 298 (328)
Q Consensus 225 ~-lp-~~~~~fD~i~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (328)
. ++ +.+..||+|+... +---.+| ..+++.++++++|||++...+ ...
T Consensus 177 ~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt--------------------------aag 229 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSYS--------------------------SSL 229 (308)
T ss_dssp HHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC--------------------------CCH
T ss_pred HHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEEe--------------------------CcH
Confidence 3 33 3455799999854 2222355 489999999999999887522 124
Q ss_pred HHHHHHHHCCCeEEEEEEeC-cEEEEEEeC
Q 020307 299 EIEDLCTSCGLTNYTSKVQQ-SFIMFAAQK 327 (328)
Q Consensus 299 ~l~~ll~~~Gf~~v~~~~~~-~~~~~~a~k 327 (328)
.+++.|+++||++.+....+ .--+.+|.+
T Consensus 230 ~VRR~L~~aGF~V~k~~G~g~KReml~A~~ 259 (308)
T 3vyw_A 230 SVRKSLLTLGFKVGSSREIGRKRKGTVASL 259 (308)
T ss_dssp HHHHHHHHTTCEEEEEECC---CEEEEEES
T ss_pred HHHHHHHHCCCEEEecCCCCCCCceeEEec
Confidence 78899999999988754432 235666654
No 309
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.28 E-value=0.0022 Score=57.19 Aligned_cols=147 Identities=17% Similarity=0.070 Sum_probs=95.5
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC---------CCCCcc
Q 020307 163 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------FASGFV 233 (328)
Q Consensus 163 ~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------~~~~~f 233 (328)
..||++|||-=.....+.. ....+++-+| .+..++..++.+...+.....+..++.+|+.+ . +.....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 5799999997666544442 2235899999 59999988888875332125678899999875 2 222344
Q ss_pred ceEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCc----chhh-HHHHHhh-----h-ccCCC-CC-HH
Q 020307 234 DAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSST----SLTG-RVLRERI-----L-QNYNY-LT-EE 298 (328)
Q Consensus 234 D~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~----~~~~-~~~~~~~-----~-~~~~~-~~-~~ 298 (328)
=++++-.+++++++. ..+++.+...+.||+.+++.......... ..+. +.+.... + ....+ .+ .+
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~ 260 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRA 260 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChH
Confidence 577788889999753 47888888888899988887655432101 0001 1121111 1 12233 36 78
Q ss_pred HHHHHHHHCCCeEE
Q 020307 299 EIEDLCTSCGLTNY 312 (328)
Q Consensus 299 ~l~~ll~~~Gf~~v 312 (328)
+..+.|.++||+.+
T Consensus 261 ~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 261 VVADWLNRHGWRAT 274 (310)
T ss_dssp CHHHHHTTTTEEEE
T ss_pred HHHHHHHHCcCccc
Confidence 99999999999887
No 310
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.16 E-value=0.0011 Score=57.63 Aligned_cols=98 Identities=9% Similarity=0.026 Sum_probs=66.2
Q ss_pred ccccCCCeEEEEcC------CcCHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC
Q 020307 157 FKSAQGGLLVDVSC------GSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 229 (328)
Q Consensus 157 l~~~~~~~vLDiGc------G~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 229 (328)
+..+.+.+|||+|+ ..|. ..+.+.++. ..++++|+.+-.. ... .++++|...+. .
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s--------------da~-~~IqGD~~~~~-~ 166 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS--------------DAD-STLIGDCATVH-T 166 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC--------------SSS-EEEESCGGGEE-E
T ss_pred EeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc--------------CCC-eEEEccccccc-c
Confidence 44567899999996 5666 345555665 4899999976321 223 45999976543 3
Q ss_pred CCccceEEecccc---ccCC--C------hHHHHHHHHhcccCCcEEEEEEecc
Q 020307 230 SGFVDAVHAGAAL---HCWP--S------PSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 230 ~~~fD~i~~~~vl---~h~~--d------~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
.++||+|++...= -+.. . -+.++.-+.++|+|||.|++-.+..
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 5789999986431 1111 1 1355667788999999999988654
No 311
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.96 E-value=0.0014 Score=59.34 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 226 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 226 (328)
++..|||||.|.|.++..|.+.....+|+++|+++..+...++.. . ..++.++.+|+..+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEEECCccch
Confidence 358999999999999999998632348999999999999888765 2 45899999999654
No 312
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.77 E-value=0.0024 Score=55.41 Aligned_cols=47 Identities=21% Similarity=0.247 Sum_probs=42.4
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 208 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~ 208 (328)
.++..|||..||+|..+..+.+.+. +++|+|+++..++.+++++...
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhc
Confidence 5788999999999999999999876 9999999999999999998753
No 313
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.35 E-value=0.014 Score=52.47 Aligned_cols=95 Identities=18% Similarity=0.216 Sum_probs=64.6
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC------CC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------AS 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~------~~ 230 (328)
...++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. ... .++ |..+..+ ..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~~i--~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL--------GAE-VAV--NARDTDPAAWLQKEI 230 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT--------TCS-EEE--ETTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc--------CCC-EEE--eCCCcCHHHHHHHhC
Confidence 345788999999986 88888888874 44999999999988887662 111 122 2221111 11
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+.+|+|+.... -...++.+.+.|+|+|++++...
T Consensus 231 g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 231 GGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 35888875432 23468899999999999988653
No 314
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=96.20 E-value=0.0032 Score=39.75 Aligned_cols=32 Identities=28% Similarity=0.552 Sum_probs=23.7
Q ss_pred CcccccCCCc-hhhccCCCCccccccccCceeeCCCCccccC
Q 020307 59 DLFSCPICYE-PLIRKGPTGLTLGAIYRSGFKCRKCDKTYSS 99 (328)
Q Consensus 59 ~~l~CP~C~~-~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 99 (328)
..+.||.|++ ++..... .+.+.|..||..+..
T Consensus 4 ~~~~CP~C~~~~l~~d~~---------~gelvC~~CG~v~~e 36 (50)
T 1pft_A 4 KQKVCPACESAELIYDPE---------RGEIVCAKCGYVIEE 36 (50)
T ss_dssp SCCSCTTTSCCCEEEETT---------TTEEEESSSCCBCCC
T ss_pred ccEeCcCCCCcceEEcCC---------CCeEECcccCCcccc
Confidence 4678999998 6654332 268999999988743
No 315
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.16 E-value=0.096 Score=46.83 Aligned_cols=127 Identities=12% Similarity=0.088 Sum_probs=82.6
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCC-ceE-EEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC---CCCccceE
Q 020307 162 GGLLVDVSCGSGLFSRKFAKSGTY-SGV-VALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVDAV 236 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~~~~-~~v-~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~---~~~~fD~i 236 (328)
..+++|+-||.|.+...+.+.|.. ..+ .++|+++...+..+.++.. . ++.+|+.++.. +...+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~--------~-~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE--------E-VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC--------C-CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC--------C-cccCChhhcCHHHhccCCCCEE
Confidence 458999999999999999998732 346 7999999999888876532 1 56778877642 22368999
Q ss_pred EeccccccC-----------CChH-HHHHHHHh-cccC---CcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHH
Q 020307 237 HAGAALHCW-----------PSPS-NAVAEISR-ILRS---GGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEI 300 (328)
Q Consensus 237 ~~~~vl~h~-----------~d~~-~~l~~~~r-~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (328)
+...--..+ .|+. .++.++.+ +++. .-.+++.+.... + .. .-+.+.+
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~g-----l-~~-----------~~~~~~i 143 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPL-----F-KE-----------SLVFKEI 143 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGG-----G-GG-----------SHHHHHH
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhh-----h-cC-----------hHHHHHH
Confidence 965433322 3554 45666666 5532 134555554321 1 00 0124678
Q ss_pred HHHHHHCCCeEEEE
Q 020307 301 EDLCTSCGLTNYTS 314 (328)
Q Consensus 301 ~~ll~~~Gf~~v~~ 314 (328)
.+.|++.|+.+...
T Consensus 144 ~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 144 YNILIKNQYYIKDI 157 (327)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHhCCCEEEEE
Confidence 88899999987654
No 316
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.10 E-value=0.021 Score=51.44 Aligned_cols=94 Identities=13% Similarity=0.119 Sum_probs=65.0
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceE
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 236 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i 236 (328)
...++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. .... ++ .+...+ .. .+|+|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~~-v~-~~~~~~--~~-~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM--------GVKH-FY-TDPKQC--KE-ELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT--------TCSE-EE-SSGGGC--CS-CEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc--------CCCe-ec-CCHHHH--hc-CCCEE
Confidence 446789999999876 77888888764 44999999999988887762 1122 22 333222 22 79998
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+-.-. .+ ..+....+.|+|+|++++....
T Consensus 239 id~~g-----~~-~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 239 ISTIP-----TH-YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp EECCC-----SC-CCHHHHHTTEEEEEEEEECCCC
T ss_pred EECCC-----cH-HHHHHHHHHHhcCCEEEEECCC
Confidence 85432 22 2477888999999999987543
No 317
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.02 E-value=0.31 Score=43.60 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=93.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcC--------------c------CCCCCeEEE
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDN--------------T------ILTSNLALV 219 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~--------------~------~~~~~i~~~ 219 (328)
+...|+-+|||.=.....+...+ +...++=+|. ++.++.=++.+.... . ....+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 46789999999877777776542 3457888886 445444333333200 0 014678899
Q ss_pred EecCCCCC----------CCCCccceEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHh
Q 020307 220 RADVCRLP----------FASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRER 287 (328)
Q Consensus 220 ~~d~~~lp----------~~~~~fD~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 287 (328)
.+|+.+.. +.....=++++-.++.+++.. ..+|+.+.+.. |+|.+++.++... ..++ ++.+...
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p--~d~f-g~~M~~~ 244 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNM--GDRF-GQIMIEN 244 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCT--TSHH-HHHHHHH
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCC--CCHH-HHHHHHH
Confidence 99986631 333445577788888888643 46777777766 4566666666543 2233 3332221
Q ss_pred ----h---hccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 288 ----I---LQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 288 ----~---~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
. .....+.+.++..+.|.++||+.++..
T Consensus 245 l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 245 LRRRQCDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp HHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred HHHhCCCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 1 122346788999999999999987643
No 318
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.01 E-value=0.035 Score=51.01 Aligned_cols=102 Identities=14% Similarity=0.137 Sum_probs=68.5
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CC------CC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP------FA 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp------~~ 229 (328)
...++.+||-+|+|. |.++..+++...-.+|+++|.+++.++.+++. ..+.+...-.+ +. ..
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~v~~~t~ 251 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----------GFEIADLSLDTPLHEQIAALLG 251 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----------TCEEEETTSSSCHHHHHHHHHS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----------CCcEEccCCcchHHHHHHHHhC
Confidence 446788999999876 88888888874223699999999988888652 12322211111 00 01
Q ss_pred CCccceEEecccc---------ccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 230 SGFVDAVHAGAAL---------HCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 230 ~~~fD~i~~~~vl---------~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
...+|+|+-.-.- .|.+++...++...+.|++||++++..
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 2369999865432 234556677899999999999988754
No 319
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.91 E-value=0.021 Score=51.99 Aligned_cols=98 Identities=17% Similarity=0.128 Sum_probs=64.4
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-----CCCCC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----PFASG 231 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p~~~~ 231 (328)
...++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. ... .++..+-.++ ....+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~~~~~~~g 257 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL--------GAT-HVINSKTQDPVAAIKEITDG 257 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHHHTTS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc--------CCC-EEecCCccCHHHHHHHhcCC
Confidence 446788999999886 77888888763222699999999988888753 111 1221111111 01123
Q ss_pred ccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 232 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 232 ~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.+|+|+-.-. . ...++...+.|+++|++++...
T Consensus 258 g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 258 GVNFALESTG-----S-PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp CEEEEEECSC-----C-HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEeCC
Confidence 6899885432 2 3458889999999999988654
No 320
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.91 E-value=0.049 Score=48.88 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=60.5
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC------CCC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FAS 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~~ 230 (328)
...++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++. ... ..+...-.+.. ...
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~--------Ga~-~~i~~~~~~~~~~v~~~t~g 230 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI--------GAD-VTINSGDVNPVDEIKKITGG 230 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT--------TCS-EEEEC-CCCHHHHHHHHTTS
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc--------CCe-EEEeCCCCCHHHHhhhhcCC
Confidence 346789999999987 44555555543356999999999888777653 111 12211111110 112
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
..+|.++...+ -...+....+.|+++|++++...
T Consensus 231 ~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 231 LGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp SCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCceEEEEecc------CcchhheeheeecCCceEEEEec
Confidence 24666654322 24568888999999999887653
No 321
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.67 E-value=0.031 Score=51.72 Aligned_cols=64 Identities=11% Similarity=0.149 Sum_probs=49.7
Q ss_pred cccCCCeEEEEcCCcCHHHHHHH-HhCC-CceEEEEeCCHHHHHHHHHHHHh--cCcCCC-CCeEEEEecC
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFA-KSGT-YSGVVALDFSENMLRQCYDFIKQ--DNTILT-SNLALVRADV 223 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~-~~~~-~~~v~g~D~s~~~~~~a~~~~~~--~~~~~~-~~i~~~~~d~ 223 (328)
...++..++|||++.|.++..++ +.++ ..+|+++|+++...+..+++++. ++. . .++.++..-+
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~--~~~~v~~~~~al 291 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTN--FASRITVHGCGA 291 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTST--TGGGEEEECSEE
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccC--CCCCEEEEEeEE
Confidence 34688999999999999999888 4544 36999999999999999998876 221 3 5666665444
No 322
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.67 E-value=0.047 Score=50.20 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=65.8
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C-----C-C
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P-----F-A 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p-----~-~ 229 (328)
...++.+||.+|+|. |.++..+++...-.+|+++|.+++.++.+++. ....+..+-.++ . . .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~~~~~~~ 251 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----------GFETIDLRNSAPLRDQIDQILG 251 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----------TCEEEETTSSSCHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----------CCcEEcCCCcchHHHHHHHHhC
Confidence 456789999999986 88888888764223899999999988877642 123322111111 0 0 1
Q ss_pred CCccceEEeccccccC--------CChHHHHHHHHhcccCCcEEEEEE
Q 020307 230 SGFVDAVHAGAALHCW--------PSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~--------~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
...+|+|+-.-.-... .++...+++..+.|++||++++..
T Consensus 252 g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 252 KPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp SSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 2269999865432210 013356889999999999988754
No 323
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.42 E-value=0.12 Score=46.81 Aligned_cols=98 Identities=14% Similarity=0.100 Sum_probs=65.1
Q ss_pred ccccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC------CC
Q 020307 157 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 229 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 229 (328)
....++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. ... .++..+..++. ..
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~v~~~~~ 254 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL--------GAD-HGINRLEEDWVERVYALTG 254 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc--------CCC-EEEcCCcccHHHHHHHHhC
Confidence 3456789999999876 77777787763 45999999999988887663 111 12221111110 11
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
...+|+|+-.-. ...+....+.|+|+|++++....
T Consensus 255 g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 255 DRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp TCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred CCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEecC
Confidence 236999986543 12467788999999999887543
No 324
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.40 E-value=0.037 Score=50.36 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=62.3
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEe---c-CCCCCCCCCc
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA---D-VCRLPFASGF 232 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~---d-~~~lp~~~~~ 232 (328)
...++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. ... .++.. + ...+ . +.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~~--~-~g 257 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL--------GAD-EVVNSRNADEMAAH--L-KS 257 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH--------TCS-EEEETTCHHHHHTT--T-TC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCc-EEeccccHHHHHHh--h-cC
Confidence 345788999999975 77777887763 44899999999988888753 111 11111 1 1111 1 46
Q ss_pred cceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 233 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+|+|+-.-.-. ..++...+.|+++|+++....
T Consensus 258 ~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 258 FDFILNTVAAP------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EEEEEECCSSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred CCEEEECCCCH------HHHHHHHHHhccCCEEEEecc
Confidence 89988543321 236778899999999887543
No 325
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.20 E-value=0.18 Score=45.51 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=66.8
Q ss_pred ccccCCCeEEEEcCCc-CHHHHHHHHhCCCce-EEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEe-----cCC-CC--
Q 020307 157 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-----DVC-RL-- 226 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~-v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-----d~~-~l-- 226 (328)
....++.+||-+|+|. |.++..+++.. +.+ |+++|.+++.++.+++. . ..-+.+... |+. .+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~------~~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-C------PEVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-C------TTCEEEECCSCCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-c------hhcccccccccchHHHHHHHHH
Confidence 3456788999999876 77888888874 335 99999999999998875 2 112222211 110 00
Q ss_pred CCCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 227 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 227 p~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
-.....+|+|+-.-. . ...+....+.|++||++++....
T Consensus 247 ~t~g~g~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 247 SFGGIEPAVALECTG-----V-ESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp HTSSCCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECCCC
T ss_pred HhCCCCCCEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEccC
Confidence 012346899885432 2 24578899999999999887543
No 326
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.17 E-value=0.054 Score=46.62 Aligned_cols=106 Identities=16% Similarity=0.200 Sum_probs=69.3
Q ss_pred CCeEEEEcCCcCHHHHHHHHh-------CCCceEEEEe-----CCHH-------------------HHHHHHHHH-----
Q 020307 162 GGLLVDVSCGSGLFSRKFAKS-------GTYSGVVALD-----FSEN-------------------MLRQCYDFI----- 205 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~g~D-----~s~~-------------------~~~~a~~~~----- 205 (328)
.+.|+|+|+-.|..+..++.. ++..+++|+| +... ..+..++.+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 459999999999988776542 3567899999 3210 011112111
Q ss_pred -HhcCcCCCCCeEEEEecCCC-CC-----CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 206 -KQDNTILTSNLALVRADVCR-LP-----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 206 -~~~~~~~~~~i~~~~~d~~~-lp-----~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
...+. ...++.++.+++.+ +| .+..+||+|+...-. ...-...+..+...|+|||++++-+.
T Consensus 150 ~~~~g~-~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 150 SDFFGH-VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp TSTTTT-SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhcCC-CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 11121 03789999999854 33 234579999987632 12234678999999999999999664
No 327
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.16 E-value=0.11 Score=46.45 Aligned_cols=95 Identities=22% Similarity=0.245 Sum_probs=62.4
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC------C
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA------S 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~------~ 230 (328)
...++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++. + .. .+ .|..+..+. .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~--~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL----G----AD-LV--VNPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----T----CS-EE--ECTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHC----C----CC-EE--ecCCCccHHHHHHHHh
Confidence 345788999999864 77777777663 34999999999988877642 1 11 11 233221110 0
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+.+|+|+..-. . ...++...+.|+++|+++....
T Consensus 229 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 GGVHAAVVTAV-----S-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCC-----C-HHHHHHHHHHhhcCCEEEEecc
Confidence 36888875432 2 2457888999999999887643
No 328
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.13 E-value=0.38 Score=43.58 Aligned_cols=98 Identities=21% Similarity=0.222 Sum_probs=65.9
Q ss_pred ccccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------
Q 020307 157 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 227 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 227 (328)
....++.+||-+|+|. |.++..+++.....+|+++|.+++..+.+++. ... ..+ |.....
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi--~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV--------GAT-ATV--DPSAGDVVEAIAGP 246 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH--------TCS-EEE--CTTSSCHHHHHHST
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc--------CCC-EEE--CCCCcCHHHHHHhh
Confidence 3456789999999876 77888888874223899999999988888763 111 111 211100
Q ss_pred --CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 228 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 228 --~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
...+.+|+|+-.- .. ...++...+.|++||++++....
T Consensus 247 ~~~~~gg~Dvvid~~-----G~-~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 247 VGLVPGGVDVVIECA-----GV-AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp TSSSTTCEEEEEECS-----CC-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred hhccCCCCCEEEECC-----CC-HHHHHHHHHHhccCCEEEEEecc
Confidence 1234799998542 22 34588899999999999886543
No 329
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.12 E-value=0.048 Score=44.63 Aligned_cols=93 Identities=20% Similarity=0.172 Sum_probs=59.1
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHH-hCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-------
Q 020307 158 KSAQGGLLVDVSC--GSGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 227 (328)
...++.+||..|+ |.|..+..+++ .+. +|+++|.+++..+.+++ .+ ... . .|..+..
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~----~g----~~~-~--~d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLSR----LG----VEY-V--GDSRSVDFADEILE 101 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHT----TC----CSE-E--EETTCSTHHHHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH----cC----CCE-E--eeCCcHHHHHHHHH
Confidence 3457889999995 33655555554 454 89999999887766643 11 111 1 2332211
Q ss_pred -CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 228 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 -~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
...+.+|+++.+.. ...++...+.|+|||+++....
T Consensus 102 ~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 102 LTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred HhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 11236999986542 2457889999999999887654
No 330
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.11 E-value=0.14 Score=46.12 Aligned_cols=97 Identities=16% Similarity=0.127 Sum_probs=63.3
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecC-CCCC------CC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLP------FA 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp------~~ 229 (328)
...++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. ... .++..+- .++. ..
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC--------GAD-VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT--------TCS-EEEECCTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh--------CCC-EEEcCcccccHHHHHHHHhc
Confidence 446788999999875 77777777763 34799999999988887652 112 2222110 1110 01
Q ss_pred ---CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 230 ---SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.+.+|+|+..-. . ...++...+.|+++|+++....
T Consensus 235 ~~~g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSG-----N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHSSSCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred cccCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 246899885432 2 3457888999999999988653
No 331
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.10 E-value=0.11 Score=46.90 Aligned_cols=90 Identities=13% Similarity=0.100 Sum_probs=59.3
Q ss_pred CeEEEEcCCc-CHHH-HHHH-HhCCCce-EEEEeCCHH---HHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC-----C
Q 020307 163 GLLVDVSCGS-GLFS-RKFA-KSGTYSG-VVALDFSEN---MLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-----S 230 (328)
Q Consensus 163 ~~vLDiGcG~-G~~~-~~l~-~~~~~~~-v~g~D~s~~---~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-----~ 230 (328)
.+||-+|+|. |.++ ..++ +.. +.+ |+++|.+++ .++.+++. ..+.+ |..+..+. .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~l----------Ga~~v--~~~~~~~~~i~~~~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEEL----------DATYV--DSRQTPVEDVPDVY 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHT----------TCEEE--ETTTSCGGGHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHc----------CCccc--CCCccCHHHHHHhC
Confidence 8999999865 7777 7787 653 346 999999987 77777642 12222 33221111 1
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
+.+|+|+-.- .. ...++.+.+.|+++|+++.....
T Consensus 241 gg~Dvvid~~-----g~-~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 241 EQMDFIYEAT-----GF-PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp CCEEEEEECS-----CC-HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCEEEECC-----CC-hHHHHHHHHHHhcCCEEEEEeCC
Confidence 3688887432 23 23578899999999998886543
No 332
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.06 E-value=0.05 Score=53.86 Aligned_cols=128 Identities=19% Similarity=0.164 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHh-------CC-----CceEEEEeC---CHHHHHHHHHH-----------HHhcCc----
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKS-------GT-----YSGVVALDF---SENMLRQCYDF-----------IKQDNT---- 210 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~-------~~-----~~~v~g~D~---s~~~~~~a~~~-----------~~~~~~---- 210 (328)
+.-+|+|+|-|+|.+...+.+. .| ..+++.+|. +.+.+..+-.. +.....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 3468999999999976655442 11 156899998 55555443211 111100
Q ss_pred -------CCCCCeEEEEecCCC-CC-CC---CCccceEEeccccccCCCh----HHHHHHHHhcccCCcEEEEEEeccCC
Q 020307 211 -------ILTSNLALVRADVCR-LP-FA---SGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFLRYT 274 (328)
Q Consensus 211 -------~~~~~i~~~~~d~~~-lp-~~---~~~fD~i~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~~~ 274 (328)
.....+++..+|+.+ ++ +. ++.+|+++....--. .+| ..+++.+.++++|||.+....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~-~np~~w~~~~~~~l~~~~~~g~~~~t~~----- 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPA-KNPDMWNEQLFNAMARMTRPGGTFSTFT----- 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEESC-----
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCC-CChhhhhHHHHHHHHHHhCCCCEEEecc-----
Confidence 001256677788733 33 11 468999998652111 123 578999999999999866422
Q ss_pred CCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEE
Q 020307 275 SSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSK 315 (328)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 315 (328)
....+++.|.++||.+.+..
T Consensus 212 ---------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 ---------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ---------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred ---------------------CcHHHHHHHHhCCeEEEecc
Confidence 11367888999999877643
No 333
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.05 E-value=0.072 Score=47.87 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=61.2
Q ss_pred cccCCCeEEEEcCCc--CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-------C
Q 020307 158 KSAQGGLLVDVSCGS--GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------F 228 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~--G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------~ 228 (328)
...++.+||-.|+|. |..+..+++...+.+|+++|.+++.++.+++. .... ++ |..+.. .
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~--------g~~~-~~--~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA--------GADY-VI--NASMQDPLAEIRRI 235 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH--------TCSE-EE--ETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh--------CCCE-Ee--cCCCccHHHHHHHH
Confidence 345788999999983 55555555542123899999999888877652 1111 11 221111 1
Q ss_pred CC-CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 229 AS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 ~~-~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.. +.+|+|+.... ....++...+.|+++|+++....
T Consensus 236 ~~~~~~d~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 236 TESKGVDAVIDLNN------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp TTTSCEEEEEESCC------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred hcCCCceEEEECCC------CHHHHHHHHHHHhcCCEEEEECC
Confidence 12 47899886543 23467888999999999887653
No 334
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.00 E-value=0.097 Score=47.23 Aligned_cols=98 Identities=15% Similarity=0.154 Sum_probs=64.3
Q ss_pred ccccCCCeEEEEcCCc-CHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEec------C-CCCC
Q 020307 157 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD------V-CRLP 227 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d------~-~~lp 227 (328)
....++.+||-+|+|. |.++..+++.. +. +|+++|.+++.++.+++. ... .++..+ . ..+.
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEI--------GAD-LVLQISKESPQEIARKVE 236 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT--------TCS-EEEECSSCCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh--------CCC-EEEcCcccccchHHHHHH
Confidence 3456789999999886 78888888874 34 899999999888887652 111 222211 0 0000
Q ss_pred -CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 228 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 -~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
...+.+|+|+-.- .. ...+....+.|+|||+++....
T Consensus 237 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 237 GQLGCKPEVTIECT-----GA-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHTSCCSEEEECS-----CC-HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHhCCCCCEEEECC-----CC-hHHHHHHHHHhcCCCEEEEEec
Confidence 0014689988543 22 3457888999999999988654
No 335
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.94 E-value=0.071 Score=48.71 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=55.4
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC--------CCCccc
Q 020307 163 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------ASGFVD 234 (328)
Q Consensus 163 ~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------~~~~fD 234 (328)
.+++|+-||.|.++..+...|. ..+.++|+++..++..+.+ .++..++++|+.++.. ....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N--------~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAIN--------FPRSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHH--------CTTSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHh--------CCCCceEecChhhcCHHHHHhhcccCCCee
Confidence 4899999999999999999884 3577999999998887775 4566788899877631 245799
Q ss_pred eEEeccc
Q 020307 235 AVHAGAA 241 (328)
Q Consensus 235 ~i~~~~v 241 (328)
+|+..--
T Consensus 74 ~i~ggpP 80 (376)
T 3g7u_A 74 GIIGGPP 80 (376)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9997543
No 336
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.93 E-value=0.13 Score=47.37 Aligned_cols=98 Identities=13% Similarity=0.047 Sum_probs=63.7
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------C
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------F 228 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------~ 228 (328)
...++.+||-+|+|. |.++..+++...-.+|+++|.+++.++.+++. ... .++ |..... .
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi--~~~~~~~~~~i~~~t 278 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL--------GAD-HVI--DPTKENFVEAVLDYT 278 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH--------TCS-EEE--CTTTSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc--------CCC-EEE--cCCCCCHHHHHHHHh
Confidence 356788999999876 77888888875223899999999998888764 111 111 221111 1
Q ss_pred CCCccceEEeccccccCCChHHHHHHHHhcc----cCCcEEEEEEec
Q 020307 229 ASGFVDAVHAGAALHCWPSPSNAVAEISRIL----RSGGVFVGTTFL 271 (328)
Q Consensus 229 ~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~L----kpgG~l~i~~~~ 271 (328)
....+|+|+- .+..+...+..+.+.| +++|++++....
T Consensus 279 ~g~g~D~vid-----~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 279 NGLGAKLFLE-----ATGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp TTCCCSEEEE-----CSSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCCCCCEEEE-----CCCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 1236898884 3345544555666666 999999886543
No 337
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.92 E-value=0.0083 Score=52.29 Aligned_cols=108 Identities=9% Similarity=-0.040 Sum_probs=79.1
Q ss_pred cccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CC---CCCCcc
Q 020307 158 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP---FASGFV 233 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp---~~~~~f 233 (328)
....+..+||+=+|+|.++..+.+.+ .+++.+|.++..++..++++.. ..++.++..|... +. -+..+|
T Consensus 88 ~~~n~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~l~~~~~~f 160 (283)
T 2oo3_A 88 KQINLNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNALLPPPEKR 160 (283)
T ss_dssp HHHSSSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHHHCSCTTSC
T ss_pred HHhcCCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHHhcCCCCCc
Confidence 33456679999999999999998855 4999999999999988887654 4578999999532 21 123469
Q ss_pred ceEEeccccccCCChHHHHHHHHh--cccCCcEEEEEEecc
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISR--ILRSGGVFVGTTFLR 272 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r--~LkpgG~l~i~~~~~ 272 (328)
|+|++.=-.+.-.+...+++.+.+ .+.|+|++++--|..
T Consensus 161 dLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 161 GLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp EEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred cEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 999986554433344566666665 456899999966554
No 338
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.91 E-value=0.056 Score=48.72 Aligned_cols=99 Identities=12% Similarity=0.153 Sum_probs=65.0
Q ss_pred ccccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC------CC
Q 020307 157 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 229 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 229 (328)
....++.+||-+|+|. |.++..+++...-.+|+++|.+++.++.+++. ... .++..+-.++. ..
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~v~~~t~ 232 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY--------GAT-DIINYKNGDIVEQILKATD 232 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH--------TCC-EEECGGGSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh--------CCc-eEEcCCCcCHHHHHHHHcC
Confidence 3456788999999876 77888888874223799999999988888764 111 12211111110 11
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
...+|+|+-.-. .+ ..++...+.|+|||+++....
T Consensus 233 g~g~D~v~d~~g-----~~-~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 233 GKGVDKVVIAGG-----DV-HTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TCCEEEEEECSS-----CT-THHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCC-----Ch-HHHHHHHHHHhcCCEEEEecc
Confidence 236999985332 22 357889999999999987653
No 339
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.87 E-value=0.061 Score=53.04 Aligned_cols=126 Identities=16% Similarity=0.103 Sum_probs=78.2
Q ss_pred CCeEEEEcCCcCHHHHHHHHh-------C-----CCceEEEEeC---CHHHHHHHHHH-----------HHhcCc-----
Q 020307 162 GGLLVDVSCGSGLFSRKFAKS-------G-----TYSGVVALDF---SENMLRQCYDF-----------IKQDNT----- 210 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~-------~-----~~~~v~g~D~---s~~~~~~a~~~-----------~~~~~~----- 210 (328)
.-+|||+|-|+|.+.....+. . ...+++++|. +.+.+..+-.. ......
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 458999999999866555332 1 1246899998 77777644331 111100
Q ss_pred ------CCCCCeEEEEecCCC-CC-C---CCCccceEEeccccccCCCh----HHHHHHHHhcccCCcEEEEEEeccCCC
Q 020307 211 ------ILTSNLALVRADVCR-LP-F---ASGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFLRYTS 275 (328)
Q Consensus 211 ------~~~~~i~~~~~d~~~-lp-~---~~~~fD~i~~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~~~~~~~ 275 (328)
.....+++..+|+.+ ++ + .+..||+|+...- ---.+| ..+++.+.++++|||.+....
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f-~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF-APAKNPDMWTQNLFNAMARLARPGGTLATFT------ 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCS-CGGGCGGGSCHHHHHHHHHHEEEEEEEEESC------
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCC-CCcCChhhhhHHHHHHHHHHhCCCCEEEecc------
Confidence 001234566677632 22 1 1467999997542 111234 478999999999999876522
Q ss_pred CcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 276 STSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
....+++.|.++||.+.+.
T Consensus 220 --------------------~~~~vr~~L~~aGf~v~~~ 238 (676)
T 3ps9_A 220 --------------------SAGFVRRGLQDAGFTMQKR 238 (676)
T ss_dssp --------------------CCHHHHHHHHHHTCEEEEE
T ss_pred --------------------CcHHHHHHHHhCCeEEEec
Confidence 1136788899999987763
No 340
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.83 E-value=0.035 Score=50.10 Aligned_cols=71 Identities=11% Similarity=0.057 Sum_probs=54.5
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC---CCCccceEEe
Q 020307 163 GLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVDAVHA 238 (328)
Q Consensus 163 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~---~~~~fD~i~~ 238 (328)
.+++|+-||.|.+...+...|.. ..++++|+++.+++..+.++ ++..++.+|+.++.. +...+|+|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEEE
Confidence 48999999999999999998732 35899999999999988873 344577888877641 1125899997
Q ss_pred ccc
Q 020307 239 GAA 241 (328)
Q Consensus 239 ~~v 241 (328)
..-
T Consensus 75 gpP 77 (343)
T 1g55_A 75 SPP 77 (343)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 341
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.70 E-value=0.078 Score=47.57 Aligned_cols=94 Identities=7% Similarity=0.115 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEE----ecC-CCCCCCCCcc
Q 020307 161 QGGLLVDVSCGS-GLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR----ADV-CRLPFASGFV 233 (328)
Q Consensus 161 ~~~~vLDiGcG~-G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~----~d~-~~lp~~~~~f 233 (328)
++.+||-+|+|. |.++..+++.. ++.+|+++|.+++.++.+++. ... .++. .|. ..+. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL--------GAD-YVSEMKDAESLINKLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH--------TCS-EEECHHHHHHHHHHHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh--------CCC-EEeccccchHHHHHhh-cCCCc
Confidence 788999999975 67777777652 234899999999988888763 111 1111 111 1111 12368
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
|+|+-.-. . ...++...+.|+|+|+++....
T Consensus 240 D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 240 SIAIDLVG-----T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred cEEEECCC-----C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 99985432 2 3357889999999999887653
No 342
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.60 E-value=0.048 Score=48.32 Aligned_cols=91 Identities=9% Similarity=0.026 Sum_probs=59.7
Q ss_pred ccccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccce
Q 020307 157 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 235 (328)
Q Consensus 157 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 235 (328)
....++.+||-+|+|. |.++..+++.. +.+|++++ +++..+.+++. ..+.+..|.+.+ .+.+|+
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~l----------Ga~~v~~d~~~v---~~g~Dv 202 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKR----------GVRHLYREPSQV---TQKYFA 202 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHH----------TEEEEESSGGGC---CSCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHc----------CCCEEEcCHHHh---CCCccE
Confidence 3456789999999964 77888888763 34999999 98888888763 112222232222 457999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 236 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 236 i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
|+-.-. .+ .+....+.|+++|+++...
T Consensus 203 v~d~~g-----~~--~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 203 IFDAVN-----SQ--NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EECC--------------TTGGGEEEEEEEEEEC
T ss_pred EEECCC-----ch--hHHHHHHHhcCCCEEEEEe
Confidence 885332 22 2366789999999998863
No 343
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.37 E-value=0.12 Score=46.96 Aligned_cols=98 Identities=17% Similarity=0.167 Sum_probs=63.7
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEec--CCCCC-----CC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD--VCRLP-----FA 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d--~~~lp-----~~ 229 (328)
...++.+||-+|+|. |.++..+++...-.+|+++|.+++.++.+++. + --.++... -..+. ..
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----G-----a~~vi~~~~~~~~~~~~i~~~~ 260 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----G-----VNEFVNPKDHDKPIQEVIVDLT 260 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----T-----CCEEECGGGCSSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C-----CcEEEccccCchhHHHHHHHhc
Confidence 456788999999975 77888888764223799999999988877652 1 11122111 01110 11
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCC-cEEEEEEe
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 270 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 270 (328)
.+.+|+|+-.- ..+ ..++...+.|++| |++++...
T Consensus 261 ~gg~D~vid~~-----g~~-~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 261 DGGVDYSFECI-----GNV-SVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp TSCBSEEEECS-----CCH-HHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCCCEEEECC-----CCH-HHHHHHHHHhhccCCEEEEEcc
Confidence 23689988543 233 4578899999997 99888654
No 344
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.32 E-value=0.11 Score=46.32 Aligned_cols=93 Identities=11% Similarity=0.003 Sum_probs=60.4
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CC-------
Q 020307 158 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp------- 227 (328)
...++.+||..|+ |.|..+..+++.. +.+|+++|.+++.++.+++ + + ... ..|..+ ..
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~-~---g----~~~---~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQ-I---G----FDA---AFNYKTVNSLEEALKK 209 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-T---T----CSE---EEETTSCSCHHHHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-c---C----CcE---EEecCCHHHHHHHHHH
Confidence 3457889999998 3466666666542 3499999999988877743 1 1 111 123322 11
Q ss_pred CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 228 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
...+.+|+++.+.. ...++...+.|++||++++..
T Consensus 210 ~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 210 ASPDGYDCYFDNVG-------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred HhCCCCeEEEECCC-------hHHHHHHHHHHhcCCEEEEEe
Confidence 11246899886554 235788899999999998764
No 345
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.31 E-value=0.74 Score=41.02 Aligned_cols=126 Identities=15% Similarity=0.102 Sum_probs=76.9
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC-CCccceEEecc
Q 020307 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-SGFVDAVHAGA 240 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-~~~fD~i~~~~ 240 (328)
+.+++|+-||.|.+...+...|. ..+.++|+++..++..+.++.. .. .+|+.++... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~-----~~-----~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGE-----KP-----EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSC-----CC-----BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCC-----CC-----cCCHHHcCHhhCCCCCEEEECC
Confidence 56899999999999999999874 4588999999999888887542 11 5777665311 13589998753
Q ss_pred ccccC---------CChH-HH---HHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHC
Q 020307 241 ALHCW---------PSPS-NA---VAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSC 307 (328)
Q Consensus 241 vl~h~---------~d~~-~~---l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 307 (328)
-...+ .|+. .+ +-++.+.++|. +++.+.... .... ...-..+.+.+.|++.
T Consensus 80 PCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~g--l~~~------------~~~~~~~~i~~~l~~~ 143 (327)
T 2c7p_A 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKN--FASH------------DNGNTLEVVKNTMNEL 143 (327)
T ss_dssp CCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGG--GGTG------------GGGHHHHHHHHHHHHT
T ss_pred CCCCcchhcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHH--HHhc------------cccHHHHHHHHHHHhC
Confidence 22222 2332 12 23344456785 344443221 0000 0001235778888999
Q ss_pred CCeEEEE
Q 020307 308 GLTNYTS 314 (328)
Q Consensus 308 Gf~~v~~ 314 (328)
|+.+...
T Consensus 144 GY~v~~~ 150 (327)
T 2c7p_A 144 DYSFHAK 150 (327)
T ss_dssp TBCCEEE
T ss_pred CCEEEEE
Confidence 9976553
No 346
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.17 E-value=0.092 Score=47.03 Aligned_cols=95 Identities=16% Similarity=0.233 Sum_probs=61.5
Q ss_pred ccccCCCeEEEEcCC--cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-------
Q 020307 157 FKSAQGGLLVDVSCG--SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 227 (328)
Q Consensus 157 l~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 227 (328)
....++.+||-+|+| .|..+..+++.. +.+|+++|.+++.++.+++. .... .+ |.....
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l--------ga~~-~~--~~~~~~~~~~~~~ 207 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL--------GAAY-VI--DTSTAPLYETVME 207 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH--------TCSE-EE--ETTTSCHHHHHHH
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC--------CCcE-EE--eCCcccHHHHHHH
Confidence 345678999999987 477777777652 34999999999888888763 1121 11 221111
Q ss_pred -CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 228 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 -~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.....+|+|+..-. .+ .+.+..+.|+++|+++....
T Consensus 208 ~~~~~g~Dvvid~~g-----~~--~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 208 LTNGIGADAAIDSIG-----GP--DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp HTTTSCEEEEEESSC-----HH--HHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCCcEEEECCC-----Ch--hHHHHHHHhcCCCEEEEEee
Confidence 11246999986443 12 23445589999999988754
No 347
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.17 E-value=0.14 Score=45.98 Aligned_cols=97 Identities=13% Similarity=0.192 Sum_probs=64.8
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C-CC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-AS 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~ 230 (328)
...++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. ... .++..+- ++. . ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l--------Ga~-~~i~~~~-~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV--------GAD-AAVKSGA-GAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT--------TCS-EEEECST-THHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc--------CCC-EEEcCCC-cHHHHHHHHhCC
Confidence 345788999999876 77888888763245999999999998888762 111 1222111 110 0 12
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
..+|+|+-.- .. ...++...+.|+++|++++...
T Consensus 238 ~g~d~v~d~~-----G~-~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 238 QGATAVFDFV-----GA-QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GCEEEEEESS-----CC-HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCeEEEECC-----CC-HHHHHHHHHHHhcCCEEEEECC
Confidence 2688888533 22 3368899999999999988654
No 348
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.15 E-value=0.092 Score=47.17 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=61.2
Q ss_pred cccCCCeEEEEcCC--cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCC------
Q 020307 158 KSAQGGLLVDVSCG--SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPF------ 228 (328)
Q Consensus 158 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~------ 228 (328)
...++.+||.+|++ .|..+..+++.. +.+|+++|.+++.++.+++. ... .. .|..+ ..+
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~--------g~~-~~--~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI--------GGE-VF--IDFTKEKDIVGAVLK 233 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT--------TCC-EE--EETTTCSCHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc--------CCc-eE--EecCccHhHHHHHHH
Confidence 34578899999983 466666666643 34999999998877766542 111 11 24321 110
Q ss_pred -CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 229 -ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 -~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
..+.+|+|+.... ....++.+.+.|+++|+++....
T Consensus 234 ~~~~~~D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 234 ATDGGAHGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHTSCEEEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred HhCCCCCEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 1126898886543 23468899999999999887654
No 349
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.12 E-value=0.18 Score=45.75 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=63.2
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEec-C-CCCC-----CC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD-V-CRLP-----FA 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d-~-~~lp-----~~ 229 (328)
...++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. ... .++..+ . .++. ..
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~~~i~~~t 258 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL--------GAT-ECLNPKDYDKPIYEVICEKT 258 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT--------TCS-EEECGGGCSSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc--------CCc-EEEecccccchHHHHHHHHh
Confidence 345788999999875 77788888764222799999999988887652 111 122111 0 1110 11
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCC-cEEEEEEe
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 270 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 270 (328)
.+.+|+|+-.-. . ...++...+.|+++ |++++...
T Consensus 259 ~gg~Dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 259 NGGVDYAVECAG-----R-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp TSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCCCCEEEECCC-----C-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 236899885432 2 34578899999999 99887653
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.07 E-value=1.2 Score=43.89 Aligned_cols=150 Identities=13% Similarity=0.179 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCC--------CceEEEEeCCHHHHHHHHHHHHhcC-------------cC--------
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGT--------YSGVVALDFSENMLRQCYDFIKQDN-------------TI-------- 211 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~--------~~~v~g~D~s~~~~~~a~~~~~~~~-------------~~-------- 211 (328)
+...|+-+|||.=.....|....+ ...++=+|. ++.++.=++.+.... ..
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 456899999998877777765533 345666665 334433333343110 00
Q ss_pred CCCCeEEEEecCCCCC----------C-CCCccceEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEEeccCC-CCc
Q 020307 212 LTSNLALVRADVCRLP----------F-ASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYT-SST 277 (328)
Q Consensus 212 ~~~~i~~~~~d~~~lp----------~-~~~~fD~i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~ 277 (328)
...+..++.+|+.+.. + .....-++++-.+|.+++.. ..+|+.+.+. |+|.+++.+..... ...
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d 263 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFE 263 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTS
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCC
Confidence 0137889999997641 1 23334566677888888643 4677777754 67777776654432 122
Q ss_pred chhhHHHHHhh-------hccCCCCCHHHHHHHHHHCCCeEEEE
Q 020307 278 SLTGRVLRERI-------LQNYNYLTEEEIEDLCTSCGLTNYTS 314 (328)
Q Consensus 278 ~~~~~~~~~~~-------~~~~~~~~~~~l~~ll~~~Gf~~v~~ 314 (328)
++ ++.+.... .....+.+.++..+.|.++||+.+..
T Consensus 264 ~f-~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~ 306 (695)
T 2zwa_A 264 PF-SKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNV 306 (695)
T ss_dssp HH-HHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEE
T ss_pred hH-HHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcce
Confidence 22 33222211 12235678999999999999987653
No 351
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.05 E-value=0.13 Score=45.80 Aligned_cols=95 Identities=11% Similarity=0.026 Sum_probs=62.2
Q ss_pred cccCCCeEEEEcCC--cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-------C
Q 020307 158 KSAQGGLLVDVSCG--SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------F 228 (328)
Q Consensus 158 ~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------~ 228 (328)
...++.+||-+|++ .|..+..+++.. +.+|+++|.+++.++.+.+.+ ... ..+ |..... .
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~-------g~~-~~~--~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEEL-------GFD-GAI--DYKNEDLAAGLKRE 214 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT-------CCS-EEE--ETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-------CCC-EEE--ECCCHHHHHHHHHh
Confidence 45678999999983 477777777653 349999999998887773321 111 111 222111 1
Q ss_pred CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 229 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 ~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
..+.+|+|+.+-. ...+....+.|+++|++++...
T Consensus 215 ~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 215 CPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp CTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred cCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 1246898886443 2468899999999999988653
No 352
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.04 E-value=0.24 Score=44.91 Aligned_cols=95 Identities=18% Similarity=0.206 Sum_probs=63.1
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC----CC----
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR----LP---- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~----lp---- 227 (328)
...++.+||-+|+|. |.++..+++.. +. +|+++|.+++.++.+++. ... .++ |..+ +.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi--~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVF--------GAT-DFV--NPNDHSEPISQVLS 256 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT--------TCC-EEE--CGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHh--------CCc-eEE--eccccchhHHHHHH
Confidence 345788999999875 77788888774 34 799999999988887652 111 111 2211 10
Q ss_pred -CCCCccceEEeccccccCCChHHHHHHHHhcccCC-cEEEEEEe
Q 020307 228 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 270 (328)
Q Consensus 228 -~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 270 (328)
...+.+|+|+-.-. . ...++...+.|+++ |++++...
T Consensus 257 ~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 257 KMTNGGVDFSLECVG-----N-VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHHTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHhCCCCCEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEEcC
Confidence 11236898885332 2 34578899999999 99887653
No 353
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.02 E-value=0.17 Score=45.34 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------CCC
Q 020307 161 QGGLLVDVSCGS-GLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------FAS 230 (328)
Q Consensus 161 ~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------~~~ 230 (328)
++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++. ... .++ |..... ...
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~--------Ga~-~~~--~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKV--------GAD-YVI--NPFEEDVVKEVMDITDG 234 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHH--------TCS-EEE--CTTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh--------CCC-EEE--CCCCcCHHHHHHHHcCC
Confidence 788999999964 77777777764 44 899999999888887653 111 111 221111 012
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
..+|+|+..-. . ...++.+.+.|+++|+++....
T Consensus 235 ~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 235 NGVDVFLEFSG-----A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp SCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 35899885432 2 3457888999999999887654
No 354
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.01 E-value=0.15 Score=45.43 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=62.4
Q ss_pred cccCCCeEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC------CC
Q 020307 158 KSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 229 (328)
Q Consensus 158 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 229 (328)
...++.+||-+|+ | .|..+..+++.. +.+|+++|.+++.++.+++. ... ..+..+-.++. ..
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY--------GAE-YLINASKEDILRQVLKFTN 214 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS-EEEETTTSCHHHHHHHHTT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCc-EEEeCCCchHHHHHHHHhC
Confidence 4567899999994 3 377777777763 44999999999888877652 111 12221111110 11
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
...+|+|+..-.- ..++...+.|+++|+++....
T Consensus 215 ~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 215 GKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp TSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 3469999865431 357888899999999988653
No 355
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.94 E-value=0.18 Score=45.68 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=61.6
Q ss_pred CCCeEEEEc-CCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-C-----CCCCCc
Q 020307 161 QGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-L-----PFASGF 232 (328)
Q Consensus 161 ~~~~vLDiG-cG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-l-----p~~~~~ 232 (328)
++.+||-+| +|. |.++..+++.....+|+++|.+++.++.+++. ... .++ |..+ + ....+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l--------Gad-~vi--~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL--------GAH-HVI--DHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT--------TCS-EEE--CTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc--------CCC-EEE--eCCCCHHHHHHHhcCCC
Confidence 678999998 554 88888888862245999999999888887652 111 111 1111 0 012357
Q ss_pred cceEEeccccccCCChHHHHHHHHhcccCCcEEEEE
Q 020307 233 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 268 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 268 (328)
+|+|+-.-. -...+..+.+.|+++|++++.
T Consensus 240 ~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 998885332 234678899999999999876
No 356
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.91 E-value=0.25 Score=44.73 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=62.6
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecC--CCCC-----C
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRLP-----F 228 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~lp-----~ 228 (328)
...++.+||-+|+|. |.++..+++.. +. +|+++|.+++.++.+++. ... .++..+- .++. .
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~~~~~~~ 257 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEV--------GAT-ECVNPQDYKKPIQEVLTEM 257 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT--------TCS-EEECGGGCSSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh--------CCc-eEecccccchhHHHHHHHH
Confidence 445788999999876 77788888764 34 799999999988887652 111 1111110 0110 1
Q ss_pred CCCccceEEeccccccCCChHHHHHHHHhcccCC-cEEEEEE
Q 020307 229 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTT 269 (328)
Q Consensus 229 ~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~ 269 (328)
..+.+|+|+-.- .. ...++...+.|+++ |++++..
T Consensus 258 ~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 258 SNGGVDFSFEVI-----GR-LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp TTSCBSEEEECS-----CC-HHHHHHHHHHBCTTTCEEEECS
T ss_pred hCCCCcEEEECC-----CC-HHHHHHHHHHhhcCCcEEEEec
Confidence 123689887543 22 34578899999999 9988764
No 357
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.86 E-value=0.26 Score=44.69 Aligned_cols=95 Identities=15% Similarity=0.127 Sum_probs=63.1
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC----CC----
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR----LP---- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~----lp---- 227 (328)
...++.+||-+|+|. |.++..+++.. +. +|+++|.+++.++.+++. ... .++ |..+ +.
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi--~~~~~~~~~~~~v~ 259 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKAL--------GAT-DCL--NPRELDKPVQDVIT 259 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT--------TCS-EEE--CGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh--------CCc-EEE--ccccccchHHHHHH
Confidence 445788999999875 77888888874 34 799999999988887652 111 111 2111 10
Q ss_pred -CCCCccceEEeccccccCCChHHHHHHHHhcccCC-cEEEEEEe
Q 020307 228 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 270 (328)
Q Consensus 228 -~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 270 (328)
...+.+|+|+-.- .. ...++...+.|+++ |++++...
T Consensus 260 ~~~~~g~Dvvid~~-----G~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 260 ELTAGGVDYSLDCA-----GT-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHTSCBSEEEESS-----CC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHhCCCccEEEECC-----CC-HHHHHHHHHHhhcCCCEEEEECC
Confidence 1123689887433 22 34578899999999 99887653
No 358
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.81 E-value=0.25 Score=43.66 Aligned_cols=91 Identities=14% Similarity=0.110 Sum_probs=60.2
Q ss_pred eEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-CCCCCccceEEecc
Q 020307 164 LLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVDAVHAGA 240 (328)
Q Consensus 164 ~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD~i~~~~ 240 (328)
+||-+|+ | .|.++..+++.. +.+|+++|.+++..+.+++. .....+-..+.... ....+.+|+|+-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~~vi~~~~~~~~~~~~~~~~d~v~d~- 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL--------GANRILSRDEFAESRPLEKQLWAGAIDT- 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH--------TCSEEEEGGGSSCCCSSCCCCEEEEEES-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCCEEEecCCHHHHHhhcCCCccEEEEC-
Confidence 3999997 3 478888888874 44999999999988888763 11111111121111 1224568887643
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 241 ALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 241 vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+.. ..+....+.|+++|+++....
T Consensus 219 ----~g~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 219 ----VGD--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ----SCH--HHHHHHHHTEEEEEEEEECCC
T ss_pred ----CCc--HHHHHHHHHHhcCCEEEEEec
Confidence 232 378999999999999988653
No 359
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.81 E-value=0.43 Score=42.57 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=62.7
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC------CCC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FAS 230 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~~ 230 (328)
...++.+||-.|+|. |.++..+++......++++|.+++-++.+++. .....+...-...+ -..
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l---------Ga~~~i~~~~~~~~~~~~~~~~~ 227 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF---------GAMQTFNSSEMSAPQMQSVLREL 227 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---------TCSEEEETTTSCHHHHHHHHGGG
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc---------CCeEEEeCCCCCHHHHHHhhccc
Confidence 446788999999986 66777777764334678999999988888762 11222221111111 012
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
..+|+|+..- .. ...++...+.|++||.+++....
T Consensus 228 ~g~d~v~d~~-----G~-~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 228 RFNQLILETA-----GV-PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp CSSEEEEECS-----CS-HHHHHHHHHHCCTTCEEEECCCC
T ss_pred CCcccccccc-----cc-cchhhhhhheecCCeEEEEEecc
Confidence 3467766432 22 34578889999999999886544
No 360
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=93.79 E-value=0.02 Score=43.19 Aligned_cols=28 Identities=14% Similarity=0.428 Sum_probs=24.6
Q ss_pred ccccCceeeCCCCccccCccceeeeecc
Q 020307 82 AIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (328)
Q Consensus 82 ~~~~~~~~C~~C~~~~~~~~g~~~~~~~ 109 (328)
.+.+|.+.|++||+.|++++|+++.+.+
T Consensus 94 ~V~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 94 DVVEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp EEEEEEEEETTTCCEEEEETTEEECSSC
T ss_pred EEEEEEEECCCCCCEeeccCCcccHHHh
Confidence 3467899999999999999999998765
No 361
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.65 E-value=0.18 Score=44.77 Aligned_cols=95 Identities=12% Similarity=0.067 Sum_probs=63.0
Q ss_pred cccCCCeEEEEc-CC-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------
Q 020307 158 KSAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 227 (328)
...++.+||-+| +| .|..+..+++.. +.+|+++|.+++.++.+++. ... ..+ |.....
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------Ga~-~~~--~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL--------GAW-ETI--DYSHEDVAKRVLEL 204 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH--------TCS-EEE--ETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCC-EEE--eCCCccHHHHHHHH
Confidence 456789999999 34 377777777652 34999999999988888753 111 112 221111
Q ss_pred CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEec
Q 020307 228 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
.....+|+|+..-.- ..+....+.|+++|++++....
T Consensus 205 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 205 TDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp TTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred hCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 122469998865432 3577889999999999887643
No 362
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.57 E-value=0.094 Score=47.35 Aligned_cols=95 Identities=16% Similarity=0.126 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEe-cCCCCCCCCCccceEEe
Q 020307 161 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVDAVHA 238 (328)
Q Consensus 161 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD~i~~ 238 (328)
++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++.+ + ... ++.. +...+.-..+.+|+|+-
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~l---G---a~~--vi~~~~~~~~~~~~~g~D~vid 250 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDL---G---ADD--YVIGSDQAKMSELADSLDYVID 250 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTS---C---CSC--EEETTCHHHHHHSTTTEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHc---C---Cce--eeccccHHHHHHhcCCCCEEEE
Confidence 788999999875 66777777653 348999999988777665322 1 111 1111 10000000135898885
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.-.- + ..++...+.|+++|+++....
T Consensus 251 ~~g~-----~-~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 251 TVPV-----H-HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CCCS-----C-CCSHHHHTTEEEEEEEEECSC
T ss_pred CCCC-----h-HHHHHHHHHhccCCEEEEeCC
Confidence 4321 1 125667889999999887653
No 363
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.50 E-value=0.087 Score=47.02 Aligned_cols=48 Identities=10% Similarity=0.120 Sum_probs=42.7
Q ss_pred ccCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhc
Q 020307 159 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 208 (328)
Q Consensus 159 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~ 208 (328)
..++..|||.-||+|..+....+.+- +++|+|+++..++.+++++...
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCS
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhc
Confidence 35788999999999999999998876 9999999999999999987653
No 364
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.46 E-value=0.26 Score=44.64 Aligned_cols=98 Identities=17% Similarity=0.214 Sum_probs=63.0
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEe-cC-CCCC-----CC
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DV-CRLP-----FA 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~-~~lp-----~~ 229 (328)
...++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. ... .++.. +. .++. ..
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~~~v~~~~ 257 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF--------GAT-ECINPQDFSKPIQEVLIEMT 257 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH--------TCS-EEECGGGCSSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc--------CCc-eEeccccccccHHHHHHHHh
Confidence 445788999999875 77777777763222799999999988888753 111 11111 10 0110 11
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCC-cEEEEEEe
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 270 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 270 (328)
.+.+|+|+-.-. . ...++...+.|+++ |++++...
T Consensus 258 ~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 258 DGGVDYSFECIG-----N-VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp TSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCCCEEEECCC-----c-HHHHHHHHHhhccCCcEEEEEec
Confidence 236899885432 2 34578899999999 99887653
No 365
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.40 E-value=0.12 Score=45.46 Aligned_cols=92 Identities=17% Similarity=0.162 Sum_probs=53.5
Q ss_pred CCCeEEEEecCCC-CC-CCCCccceEEeccccccC--------------------CChHHHHHHHHhcccCCcEEEEEEe
Q 020307 213 TSNLALVRADVCR-LP-FASGFVDAVHAGAALHCW--------------------PSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 213 ~~~i~~~~~d~~~-lp-~~~~~fD~i~~~~vl~h~--------------------~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
..++.++++|..+ ++ +++++||+|+++=-.... .....+++++.++|||||.+++...
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3467889999855 22 457899999986322111 0113467899999999999988764
Q ss_pred ccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 271 LRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
........ . ..+..+.-..++..+++++||....
T Consensus 99 d~~~~~~~-----~----g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 99 DVAVARRR-----F----GRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp CEEEECC-------------EEEECHHHHHHHHHHHTTCEEEE
T ss_pred CCcccccc-----C----CcccccccHHHHHHHHHHcCCeeec
Confidence 32100000 0 0000011135677889999997655
No 366
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.30 E-value=0.39 Score=43.33 Aligned_cols=87 Identities=14% Similarity=0.115 Sum_probs=57.3
Q ss_pred CCeEEEEcCCc-CHHHHHHHHh-CCCceEEEEeCCH---HHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC------C
Q 020307 162 GGLLVDVSCGS-GLFSRKFAKS-GTYSGVVALDFSE---NMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA------S 230 (328)
Q Consensus 162 ~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~g~D~s~---~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~------~ 230 (328)
+.+||-+|+|. |..+..+++. +. +|+++|.++ +.++.+++. ..+.+ | .+ .+. .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~~----------ga~~v--~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEET----------KTNYY--N-SS-NGYDKLKDSV 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHHH----------TCEEE--E-CT-TCSHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHHh----------CCcee--c-hH-HHHHHHHHhC
Confidence 88999999854 5566666654 44 999999988 777766642 12222 3 22 211 1
Q ss_pred CccceEEeccccccCCChHHHH-HHHHhcccCCcEEEEEEe
Q 020307 231 GFVDAVHAGAALHCWPSPSNAV-AEISRILRSGGVFVGTTF 270 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l-~~~~r~LkpgG~l~i~~~ 270 (328)
+.+|+|+..-. .+. .+ +...+.|+++|+++....
T Consensus 245 ~~~d~vid~~g-----~~~-~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 GKFDVIIDATG-----ADV-NILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCEEEEEECCC-----CCT-HHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCEEEECCC-----ChH-HHHHHHHHHHhcCCEEEEEec
Confidence 46899886543 222 35 888999999999887654
No 367
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=93.28 E-value=0.021 Score=40.03 Aligned_cols=30 Identities=23% Similarity=0.627 Sum_probs=22.8
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..+.||.|+........ .+.|.|+.|+..+
T Consensus 26 ~~y~Cp~CG~~~v~r~a---------tGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQG---------TGIWQCSYCDYKF 55 (83)
T ss_dssp SCEECSSSCCEEEEEEE---------TTEEEETTTCCEE
T ss_pred ccCcCCCCCCcceeccC---------CCeEECCCCCCEe
Confidence 46789999987654332 2799999998865
No 368
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=93.15 E-value=0.032 Score=35.02 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=22.3
Q ss_pred cccCcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 56 LEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 56 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
++...--||.||+....... ...+.|.+||..+
T Consensus 15 v~~~~k~CP~CG~~~fm~~~---------~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 15 VIRKNKFCPRCGPGVFMADH---------GDRWACGKCGYTE 47 (50)
T ss_dssp EECSSEECSSSCSSCEEEEC---------SSEEECSSSCCEE
T ss_pred EEEecccCCCCCCceEEecC---------CCeEECCCCCCEE
Confidence 34445559999986544322 1589999998765
No 369
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.12 E-value=0.21 Score=39.15 Aligned_cols=99 Identities=16% Similarity=0.201 Sum_probs=58.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCCC----CCccceE
Q 020307 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFA----SGFVDAV 236 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~----~~~fD~i 236 (328)
.+-|||+|-|+|+.-.+|.+..|+.+++.+|-.-..--.+ ..+.-.++.+|+.+ +|.. ....-++
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~----------~P~~e~~ilGdi~~tL~~~~~r~g~~a~La 110 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDS----------TPPEAQLILGDIRETLPATLERFGATASLV 110 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGG----------CCCGGGEEESCHHHHHHHHHHHHCSCEEEE
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCC----------CCchHheecccHHHHHHHHHHhcCCceEEE
Confidence 4589999999999999999999999999999532111000 02334456666533 2210 2223333
Q ss_pred EeccccccCCChH-----HHHHHHHhcccCCcEEEEEEec
Q 020307 237 HAGAALHCWPSPS-----NAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 237 ~~~~vl~h~~d~~-----~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
......++ ++.. .+-.-+..+|.|||+++...+.
T Consensus 111 HaD~G~g~-~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 111 HADLGGHN-REKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp EECCCCSC-HHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred EeecCCCC-cchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 33222221 1111 1223466789999999887665
No 370
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.04 E-value=0.29 Score=43.72 Aligned_cols=95 Identities=9% Similarity=-0.010 Sum_probs=61.8
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-CC------
Q 020307 158 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PF------ 228 (328)
Q Consensus 158 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~------ 228 (328)
...++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++.+ + .. .. .|..+. .+
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~---g----~~-~~--~d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF---G----FD-DA--FNYKEESDLTAALKR 220 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS---C----CS-EE--EETTSCSCSHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C----Cc-eE--EecCCHHHHHHHHHH
Confidence 3457889999997 3477777776653 349999999998887776321 1 11 11 133211 11
Q ss_pred -CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 229 -ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 -~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
..+.+|+|+..-. ...++...+.|++||++++...
T Consensus 221 ~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 221 CFPNGIDIYFENVG-------GKMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp HCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HhCCCCcEEEECCC-------HHHHHHHHHHHhcCCEEEEEcc
Confidence 1246899886543 2368889999999999987643
No 371
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.03 E-value=0.12 Score=46.90 Aligned_cols=93 Identities=18% Similarity=0.195 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC---CCCCCCccceE
Q 020307 161 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASGFVDAV 236 (328)
Q Consensus 161 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---lp~~~~~fD~i 236 (328)
++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++.+ + .. .++ |..+ +.-..+.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~l---G----a~-~v~--~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNF---G----AD-SFL--VSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTS---C----CS-EEE--ETTCHHHHHHTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhc---C----Cc-eEE--eccCHHHHHHhhCCCCEE
Confidence 688999999865 66777777663 349999999988777765322 1 11 111 2211 10001368998
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 237 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 237 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+..-... ..++...+.|+++|+++....
T Consensus 256 id~~g~~------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 256 IDTVSAV------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EECCSSC------CCSHHHHHHEEEEEEEEECCC
T ss_pred EECCCcH------HHHHHHHHHHhcCCEEEEEcc
Confidence 8543321 124567788999999887653
No 372
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.01 E-value=0.16 Score=45.58 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=61.8
Q ss_pred cccCCCeEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC------CC
Q 020307 158 KSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 229 (328)
Q Consensus 158 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 229 (328)
...++.+||-+|+ | .|..+..+++.. +.+|++++.+++.++.+++. ... .++..+ .++. ..
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~v~~~~-~~~~~~v~~~~~ 224 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV--------GAD-IVLPLE-EGWAKAVREATG 224 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH--------TCS-EEEESS-TTHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCc-EEecCc-hhHHHHHHHHhC
Confidence 4467899999997 3 377777777763 34999999999888877763 111 122222 2111 11
Q ss_pred CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 230 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
...+|+|+..-.- ..+....+.|+++|++++..
T Consensus 225 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 225 GAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 2369999865432 24778889999999998864
No 373
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.95 E-value=0.35 Score=43.47 Aligned_cols=93 Identities=12% Similarity=0.075 Sum_probs=60.4
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------
Q 020307 158 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 227 (328)
...++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. ... .. .|..+..
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~~--~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN--------GAH-EV--FNHREVNYIDKIKKY 234 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS-EE--EETTSTTHHHHHHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc--------CCC-EE--EeCCCchHHHHHHHH
Confidence 3457889999997 3366666666653 34999999999888766542 111 11 2322211
Q ss_pred CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 228 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
.....+|+|+.+.. ...+....+.|+++|++++..
T Consensus 235 ~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 235 VGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 11236899986543 235778899999999988765
No 374
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.88 E-value=0.19 Score=45.82 Aligned_cols=96 Identities=22% Similarity=0.235 Sum_probs=62.5
Q ss_pred ccCCCeEEEEcCCc-CHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEec------C-CCCC-C
Q 020307 159 SAQGGLLVDVSCGS-GLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD------V-CRLP-F 228 (328)
Q Consensus 159 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d------~-~~lp-~ 228 (328)
..++.+||-+|+|. |.++..+++.. + .+|+++|.+++.++.+++. ... .++..+ + +.+. .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~~~~v~~~ 262 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEI--------GAD-LTLNRRETSVEERRKAIMDI 262 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHT--------TCS-EEEETTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHc--------CCc-EEEeccccCcchHHHHHHHH
Confidence 45788999999775 77788888764 4 4999999999988887752 111 122211 0 0000 1
Q ss_pred -CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 229 -ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 -~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
....+|+|+-.-. .+ ..++...+.|+++|+++....
T Consensus 263 ~~g~g~Dvvid~~g-----~~-~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 263 THGRGADFILEATG-----DS-RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TTTSCEEEEEECSS-----CT-THHHHHHHHEEEEEEEEECCC
T ss_pred hCCCCCcEEEECCC-----CH-HHHHHHHHHHhcCCEEEEEec
Confidence 1236999885432 22 347888999999999887653
No 375
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=92.86 E-value=0.014 Score=39.91 Aligned_cols=39 Identities=28% Similarity=0.571 Sum_probs=22.9
Q ss_pred CcccccCCCchhhc----------------cCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIR----------------KGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~----------------~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
.+-.||+||+++.. ..+....+..+.+=.+.|+.||..|
T Consensus 7 ~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEF 61 (95)
T 2k5c_A 7 HMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEF 61 (95)
T ss_dssp -CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEE
T ss_pred ccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHH
Confidence 45679999997522 1111111223344578999999876
No 376
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.86 E-value=0.089 Score=47.56 Aligned_cols=97 Identities=11% Similarity=0.105 Sum_probs=60.9
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCC-CC--CCCCCcc
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC-RL--PFASGFV 233 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~-~l--p~~~~~f 233 (328)
...++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. ... .++..+-. ++ ... +.+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~v~~~~~~~~~~~~~~-~~~ 244 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM--------GAD-HYIATLEEGDWGEKYF-DTF 244 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH--------TCS-EEEEGGGTSCHHHHSC-SCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc--------CCC-EEEcCcCchHHHHHhh-cCC
Confidence 345788999999865 77777777752 33899999999888887763 111 12211111 11 011 469
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
|+|+..-.-. +...++...+.|++||+++...
T Consensus 245 D~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 245 DLIVVCASSL----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEECCSCS----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CEEEECCCCC----cHHHHHHHHHHhcCCCEEEEec
Confidence 9998654320 0123567788999999988754
No 377
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.83 E-value=0.38 Score=43.39 Aligned_cols=96 Identities=14% Similarity=0.103 Sum_probs=62.6
Q ss_pred cccCCCeEEEEc--CCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CCC
Q 020307 158 KSAQGGLLVDVS--CGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FAS 230 (328)
Q Consensus 158 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~~ 230 (328)
...++.+||-+| .|.|..+..+++.. +.+|+++|.+++.++.+++. ... .++..+-.++. ...
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------Ga~-~~~~~~~~~~~~~~~~~~~ 229 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL--------GCD-RPINYKTEPVGTVLKQEYP 229 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS-EEEETTTSCHHHHHHHHCT
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc--------CCc-EEEecCChhHHHHHHHhcC
Confidence 345788999999 34577877777763 34899999998888877652 111 12211111110 012
Q ss_pred CccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 231 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 231 ~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
+.+|+|+..-. . ..++.+.+.|+++|++++...
T Consensus 230 ~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 230 EGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp TCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 46899886543 2 468889999999999887654
No 378
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.80 E-value=0.38 Score=43.88 Aligned_cols=45 Identities=9% Similarity=0.112 Sum_probs=33.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHh-------CCCceEEEEeCCHHHHHHHHHHHH
Q 020307 162 GGLLVDVSCGSGLFSRKFAKS-------GTYSGVVALDFSENMLRQCYDFIK 206 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~g~D~s~~~~~~a~~~~~ 206 (328)
.-.|+|+|.|+|.++..+.+. ....+++.||+|+...+.=++++.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 457999999999998777643 123489999999988775555543
No 379
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.63 E-value=0.16 Score=45.23 Aligned_cols=46 Identities=20% Similarity=0.386 Sum_probs=40.8
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCH---HHHHHHHHHHHh
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSE---NMLRQCYDFIKQ 207 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~---~~~~~a~~~~~~ 207 (328)
.++..|||.=||+|..+....+.+. +++|+|+++ ..++.+++++..
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHH
Confidence 5788999999999999999999876 999999999 999999998754
No 380
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.54 E-value=2 Score=32.61 Aligned_cols=91 Identities=11% Similarity=0.090 Sum_probs=58.7
Q ss_pred CCeEEEEcCCc-CH-HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----CCCCccce
Q 020307 162 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 235 (328)
Q Consensus 162 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 235 (328)
..+|+=+|+|. |. ++..|.+.+. +|+++|.+++.++.+++ .++.++.+|..+.. ..-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRE----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHH----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 35799999975 43 3444445555 99999999998887764 25677888876532 11246788
Q ss_pred EEeccccccCCChH--HHHHHHHhcccCCcEEEEEE
Q 020307 236 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 236 i~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~ 269 (328)
|+... ++.. ..+-...+.+.|+..++...
T Consensus 75 vi~~~-----~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 75 LILTI-----PNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEEEC-----CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 77543 3333 22344566677888777655
No 381
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.43 E-value=0.51 Score=42.14 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=62.4
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------
Q 020307 158 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 227 (328)
...++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. ... .. .|..+..
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~--------ga~-~~--~d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL--------GAD-ET--VNYTHPDWPKEVRRL 230 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TCS-EE--EETTSTTHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc--------CCC-EE--EcCCcccHHHHHHHH
Confidence 3457889999998 4577777777653 34999999999988887642 111 11 2332211
Q ss_pred CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 228 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.....+|+|+..-. . ..++.+.+.|+++|+++....
T Consensus 231 ~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 231 TGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred hCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 11246999986554 2 247788899999999887653
No 382
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.30 E-value=0.37 Score=42.29 Aligned_cols=72 Identities=14% Similarity=0.024 Sum_probs=54.6
Q ss_pred cCCCeEEEEcCCcCHHHHHHHHhCCCce-EEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC----CCccc
Q 020307 160 AQGGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA----SGFVD 234 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~----~~~fD 234 (328)
....+++|+=||.|.+...+.+.|.... +.++|+++...+.-+.+ .+...++.+|+.++... .+.+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N--------~~~~~~~~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR--------HQGKIMYVGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH--------TTTCEEEECCGGGCCHHHHHHTCCCS
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh--------CCCCceeCCChHHccHHHhcccCCcC
Confidence 3456899999999999999999876333 69999999988776665 34456788998776421 13689
Q ss_pred eEEec
Q 020307 235 AVHAG 239 (328)
Q Consensus 235 ~i~~~ 239 (328)
+++..
T Consensus 86 ll~gg 90 (295)
T 2qrv_A 86 LVIGG 90 (295)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99975
No 383
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.28 E-value=0.51 Score=44.02 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=62.4
Q ss_pred cccCCCeEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------
Q 020307 158 KSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 227 (328)
...++.+||-+|+ | .|.++..+++.. +.++++++.+++-++.+++. ... .++...-.++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~d~~~~~~~~~~ 294 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAM--------GAE-AIIDRNAEGYRFWKDENTQ 294 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TCC-EEEETTTTTCCSEEETTEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhh--------CCc-EEEecCcCccccccccccc
Confidence 4567899999997 4 377888888764 45899999999888888653 111 11111111100
Q ss_pred ---------------CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 228 ---------------FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 228 ---------------~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
.....+|+|+-.-. ...+....+.|++||++++..
T Consensus 295 ~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 295 DPKEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp CHHHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEe
Confidence 01246898885332 256888999999999998854
No 384
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.25 E-value=0.53 Score=42.09 Aligned_cols=90 Identities=13% Similarity=0.172 Sum_probs=59.6
Q ss_pred CCCeEEEEc-CCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CC-----CCCCc
Q 020307 161 QGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP-----FASGF 232 (328)
Q Consensus 161 ~~~~vLDiG-cG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp-----~~~~~ 232 (328)
++.+||-+| +|. |.++..+++.. +.+|+++|.+++.++.+++. ... .++ |..+ +. ...+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~vi--~~~~~~~~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM--------GAD-IVL--NHKESLLNQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH--------TCS-EEE--CTTSCHHHHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCc-EEE--ECCccHHHHHHHhCCCC
Confidence 688999994 554 77777777763 34999999999988888763 111 111 1111 10 12346
Q ss_pred cceEEeccccccCCChHHHHHHHHhcccCCcEEEEE
Q 020307 233 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 268 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 268 (328)
+|+|+-... -...+..+.+.|+++|+++..
T Consensus 218 ~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 218 VDYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred ccEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 898885432 245578899999999999764
No 385
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=92.21 E-value=0.071 Score=34.56 Aligned_cols=31 Identities=13% Similarity=0.358 Sum_probs=20.8
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..+.||.|++.-+..+. ..+.+.|..||..+
T Consensus 10 ~~~~Cp~C~~~~lv~D~--------~~ge~vC~~CGlVl 40 (58)
T 1dl6_A 10 PRVTCPNHPDAILVEDY--------RAGDMICPECGLVV 40 (58)
T ss_dssp SCCSBTTBSSSCCEECS--------SSCCEECTTTCCEE
T ss_pred ccccCcCCCCCceeEeC--------CCCeEEeCCCCCEE
Confidence 34579999983332221 23789999998776
No 386
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.13 E-value=0.68 Score=39.40 Aligned_cols=101 Identities=21% Similarity=0.299 Sum_probs=67.7
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC---------
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------- 228 (328)
.++++|-.|++.|- ++..|++.|. +|+.+|.+++.++...+.+ ..++.++.+|+.+..-
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHH
Confidence 56789999977653 4556666666 9999999998877666544 2368889999876431
Q ss_pred -CCCccceEEeccccccCC-----Ch--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 229 -ASGFVDAVHAGAALHCWP-----SP--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 -~~~~fD~i~~~~vl~h~~-----d~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.-+.+|+++.+..+.... ++ ..+.+.+.+.++++|.++....
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 014689999876554321 11 1245667777778888776654
No 387
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.04 E-value=0.27 Score=43.75 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=54.0
Q ss_pred CCCeEEEEecCCC-CC-CCCCccceEEecccccc-----C---------CChHHHHHHHHhcccCCcEEEEEEeccCCCC
Q 020307 213 TSNLALVRADVCR-LP-FASGFVDAVHAGAALHC-----W---------PSPSNAVAEISRILRSGGVFVGTTFLRYTSS 276 (328)
Q Consensus 213 ~~~i~~~~~d~~~-lp-~~~~~fD~i~~~~vl~h-----~---------~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~ 276 (328)
.....++++|..+ +. +++++||+|++.=-... . ......++++.++|||||.+++.........
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g 91 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKG 91 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETT
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCC
Confidence 3467788888743 33 45788999998622111 1 1245788999999999999999764321000
Q ss_pred cchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEE
Q 020307 277 TSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYT 313 (328)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 313 (328)
.+. ...+....+.++++..||....
T Consensus 92 ~~~------------~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 92 VPA------------RSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EEE------------ECCHHHHHHHHHHHTTCCEEEE
T ss_pred Ccc------------cccchHHHHHHHHHhCCCEEEE
Confidence 000 0011223455678899997654
No 388
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.96 E-value=1 Score=38.26 Aligned_cols=106 Identities=16% Similarity=0.284 Sum_probs=69.8
Q ss_pred CCCeEEEEcCC--cCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC-
Q 020307 161 QGGLLVDVSCG--SGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 229 (328)
Q Consensus 161 ~~~~vLDiGcG--~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 229 (328)
.++++|-.|++ .|. ++..|++.+. +|+.++.+....+.+.+.....+ ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTLD---RNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTSS---SCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhcC---CCCceEEeCCCCCHHHHHHHHHH
Confidence 46789999976 332 5677777776 89999988766666555554432 347899999997643 10
Q ss_pred ----CCccceEEecccccc----C-----CChH--------------HHHHHHHhcccCCcEEEEEEec
Q 020307 230 ----SGFVDAVHAGAALHC----W-----PSPS--------------NAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 230 ----~~~fD~i~~~~vl~h----~-----~d~~--------------~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
-+.+|+++.+..+.+ . .++. .+++.+...++++|.++.....
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 146899987765433 1 1111 2456777788888888776643
No 389
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.90 E-value=0.51 Score=41.70 Aligned_cols=95 Identities=18% Similarity=0.137 Sum_probs=57.9
Q ss_pred ccccCCCeEEEEc-CCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCCCCCcc
Q 020307 157 FKSAQGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASGFV 233 (328)
Q Consensus 157 l~~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~~~~f 233 (328)
....++.+||-+| +|. |.++..+++.. +.+|++++ +++..+.+++. + .. .++..+-.+ +.-.-..+
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~l----G----a~-~~i~~~~~~~~~~~~~g~ 216 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKAL----G----AE-QCINYHEEDFLLAISTPV 216 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHH----T----CS-EEEETTTSCHHHHCCSCE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHc----C----CC-EEEeCCCcchhhhhccCC
Confidence 3456789999997 554 88888888774 44899998 45546666542 1 11 122111111 11111468
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
|+|+-.-. . ..+....+.|+++|+++...
T Consensus 217 D~v~d~~g-----~--~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 217 DAVIDLVG-----G--DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEEESSC-----H--HHHHHHGGGEEEEEEEEECC
T ss_pred CEEEECCC-----c--HHHHHHHHhccCCCEEEEeC
Confidence 88885332 2 23488899999999998753
No 390
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.85 E-value=0.34 Score=43.50 Aligned_cols=94 Identities=14% Similarity=0.040 Sum_probs=61.8
Q ss_pred cccCCCeEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-------
Q 020307 158 KSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------- 228 (328)
Q Consensus 158 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~------- 228 (328)
...++.+||-+|+ | .|..+..+++.. +.+|+++|.+++.++.+++. .... .+ |.....+
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~~-~~--~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL--------GAKR-GI--NYRSEDFAAVIKAE 231 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TCSE-EE--ETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCCE-EE--eCCchHHHHHHHHH
Confidence 4567889999953 3 377777777763 34999999999988888763 1111 11 2211110
Q ss_pred CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 229 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 ~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
..+.+|+|+..-.- ..+....+.|+++|++++...
T Consensus 232 ~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 232 TGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred hCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 13468998865432 257788899999999888654
No 391
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.82 E-value=0.25 Score=44.25 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=80.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC---CCCCccceEEe
Q 020307 163 GLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFVDAVHA 238 (328)
Q Consensus 163 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~fD~i~~ 238 (328)
.+++|+-||.|.+...+...|.. ..+.++|+++...+.-+.+ .+...++.+|+.++. ++...+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N--------~~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHN--------FPETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH--------CTTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHh--------CCCCceeccccccCCHHHhccCCCCEEEe
Confidence 47999999999999999988742 3588999999988887776 334456778887664 22336899986
Q ss_pred ccccc---------cCCChH-HHHHHHHhc---cc-CCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHH
Q 020307 239 GAALH---------CWPSPS-NAVAEISRI---LR-SGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLC 304 (328)
Q Consensus 239 ~~vl~---------h~~d~~-~~l~~~~r~---Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll 304 (328)
..--. ...|+. .++.++.++ ++ | .+++.+.... +... -+.+.+.+.|
T Consensus 76 gpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~g-----l~~~------------~~~~~i~~~l 136 (333)
T 4h0n_A 76 SPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKG-----FENS------------TVRNLFIDKL 136 (333)
T ss_dssp CCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTT-----GGGS------------HHHHHHHHHH
T ss_pred cCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchh-----hhhh------------hHHHHHHHHH
Confidence 43221 123443 234444444 44 5 4555554332 1000 0135788899
Q ss_pred HHCCCeEEEEE
Q 020307 305 TSCGLTNYTSK 315 (328)
Q Consensus 305 ~~~Gf~~v~~~ 315 (328)
++.|+.+....
T Consensus 137 ~~~GY~v~~~v 147 (333)
T 4h0n_A 137 KECNFIYQEFL 147 (333)
T ss_dssp HHTTEEEEEEE
T ss_pred HhCCCeEEEEE
Confidence 99999876643
No 392
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=91.61 E-value=1.7 Score=37.66 Aligned_cols=78 Identities=17% Similarity=0.186 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC-C----C----
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P----F---- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p----~---- 228 (328)
.+++||-.|++.|. ++..|++.|. +|+.++.++...+.+.+.+...+ ..++.++.+|+.+. . +
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN---HENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT---CCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEccCCCcHHHHHHHHHHH
Confidence 46788888876552 4555666665 99999999988887777776543 45799999999775 2 0
Q ss_pred --CCCccceEEeccccc
Q 020307 229 --ASGFVDAVHAGAALH 243 (328)
Q Consensus 229 --~~~~fD~i~~~~vl~ 243 (328)
.-+.+|+++.+..+.
T Consensus 86 ~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 86 KTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHSSCCEEEECCCCC
T ss_pred HHhCCCCCEEEECCccc
Confidence 014789999887654
No 393
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.57 E-value=1.3 Score=37.60 Aligned_cols=79 Identities=23% Similarity=0.340 Sum_probs=57.6
Q ss_pred CCCeEEEEcC-CcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSC-GSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGc-G~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
.++++|-.|+ |.|. ++..|++.+. +|+.+|.+...++...+.+...+ ..++.++.+|+.+.. +.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG---LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC---SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC---CCceEEEEeCCCCHHHHHHHHHHH
Confidence 5678999997 5553 5677777776 89999999988888777775543 458999999997642 00
Q ss_pred ---CCccceEEecccccc
Q 020307 230 ---SGFVDAVHAGAALHC 244 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~h 244 (328)
-+.+|+++.+..+..
T Consensus 96 ~~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHhCCCcEEEECCCcCC
Confidence 136899998876543
No 394
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.44 E-value=0.2 Score=44.85 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=60.9
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-------
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------- 228 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~------- 228 (328)
.. ++.+||-+|+|. |.++..+++.. +. +|+++|.+++.++.+++. . ..+ .|..+..+
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a---------~~v--~~~~~~~~~~~~~~~ 227 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-A---------DRL--VNPLEEDLLEVVRRV 227 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-C---------SEE--ECTTTSCHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-H---------Hhc--cCcCccCHHHHHHHh
Confidence 44 788999999865 77777777764 44 899999998877666542 1 111 12211110
Q ss_pred CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 229 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 ~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
....+|+|+..-. . ...++...+.|+++|+++....
T Consensus 228 ~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 228 TGSGVEVLLEFSG-----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HSSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 0235898885432 2 2457889999999999887643
No 395
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.43 E-value=0.67 Score=41.90 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=58.2
Q ss_pred ccCCCeEEEEc-CCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-----CCC
Q 020307 159 SAQGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----ASG 231 (328)
Q Consensus 159 ~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~~~ 231 (328)
..++.+||-.| +|. |.++..+++.. +.+|++++ +++..+.+++. + .. .++ |..+..+ ...
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~l----G----a~-~v~--~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKL----G----AD-DVI--DYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT----T----CS-EEE--ETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHc----C----CC-EEE--ECCchHHHHHHhhcC
Confidence 45788999999 443 77777777763 35899998 66666666431 1 11 112 2211110 114
Q ss_pred ccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 232 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 232 ~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
.+|+|+-.- ..+...+....+.|+++|+++...
T Consensus 248 g~D~vid~~-----g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 248 PFDFILDNV-----GGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CBSEEEESS-----CTTHHHHGGGGBCSSSCCEEEESC
T ss_pred CCCEEEECC-----CChhhhhHHHHHhhcCCcEEEEeC
Confidence 688887433 344345678888999999988754
No 396
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.39 E-value=1.5 Score=38.07 Aligned_cols=105 Identities=11% Similarity=0.158 Sum_probs=68.7
Q ss_pred cCCCeEEEEcCCcC-----HHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C-
Q 020307 160 AQGGLLVDVSCGSG-----LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F- 228 (328)
Q Consensus 160 ~~~~~vLDiGcG~G-----~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~- 228 (328)
..++++|-.|++.| .++..|++.|. +|+.++.++...+.+.+.... ..++.++.+|+.+.. +
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEE-----LGAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHH-----HTCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHH
Confidence 35778999997633 35667777776 899999987655555544443 336788899987642 0
Q ss_pred ----CCCccceEEecccccc----C-----CCh--------------HHHHHHHHhcccCCcEEEEEEec
Q 020307 229 ----ASGFVDAVHAGAALHC----W-----PSP--------------SNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 229 ----~~~~fD~i~~~~vl~h----~-----~d~--------------~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
.-+.+|+++.+..+.. . .++ ..+++.+.+.++.+|.++.....
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 1147899998766542 1 111 13456777778888888776643
No 397
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.33 E-value=1.7 Score=38.36 Aligned_cols=80 Identities=15% Similarity=0.226 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C----
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F---- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~---- 228 (328)
.+++||-.|++.|. ++..|++.|. +|++++.+++.++.+.+.+...+. ..++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEGS--GPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46789999987663 5566666776 999999999988877776655431 237889999987642 0
Q ss_pred -CCCccceEEecccccc
Q 020307 229 -ASGFVDAVHAGAALHC 244 (328)
Q Consensus 229 -~~~~fD~i~~~~vl~h 244 (328)
.-+.+|+++.+..+..
T Consensus 83 ~~~g~id~lv~nAg~~~ 99 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNL 99 (319)
T ss_dssp HHTCCEEEEEECCCCCC
T ss_pred HhCCCCCEEEECCCcCC
Confidence 0146899998876543
No 398
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.22 E-value=0.92 Score=42.08 Aligned_cols=98 Identities=20% Similarity=0.172 Sum_probs=62.1
Q ss_pred ccccCCCeEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEe--cCCCC------
Q 020307 157 FKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA--DVCRL------ 226 (328)
Q Consensus 157 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~--d~~~l------ 226 (328)
....++.+||-.|+ | .|..+..+++.. +.++++++.+++.++.+++. + ....+... |+...
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l----G----a~~~i~~~~~~~~~~~~~~~~ 286 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL----G----CDLVINRAELGITDDIADDPR 286 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CCCEEEHHHHTCCTTGGGCHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CCEEEeccccccccccccccc
Confidence 34567899999997 3 377777777763 45899999999888877642 1 11111111 11000
Q ss_pred --------------CCCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 227 --------------PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 227 --------------p~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
......+|+|+-.-. . ..++...+.|++||+++....
T Consensus 287 ~~~~~~~~~~~~v~~~~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 287 RVVETGRKLAKLVVEKAGREPDIVFEHTG-----R--VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSEEEECSC-----H--HHHHHHHHHSCTTCEEEESCC
T ss_pred ccchhhhHHHHHHHHHhCCCceEEEECCC-----c--hHHHHHHHHHhcCCEEEEEec
Confidence 000246899886443 1 357888899999999988653
No 399
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.17 E-value=0.31 Score=43.16 Aligned_cols=93 Identities=12% Similarity=0.085 Sum_probs=60.4
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-------
Q 020307 158 KSAQGGLLVDVSC--GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 227 (328)
...++.+||-.|+ |.|..+..+++. +. +|+++|.+++.++.+++. .... . .|..+..
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~~--------g~~~-~--~~~~~~~~~~~~~~ 203 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKA--------GAWQ-V--INYREEDLVERLKE 203 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH--------TCSE-E--EETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc--------CCCE-E--EECCCccHHHHHHH
Confidence 4457889999994 346666555554 54 999999999888877652 1111 1 1322111
Q ss_pred -CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 228 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 -~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.....+|+++.+.. ...++.+.+.|+++|+++....
T Consensus 204 ~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 11236899886543 2357888999999999887654
No 400
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.98 E-value=0.6 Score=41.90 Aligned_cols=94 Identities=10% Similarity=-0.029 Sum_probs=60.4
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------
Q 020307 158 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 227 (328)
...++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. .... . .|..+..
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------g~~~-~--~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL--------GAAA-G--FNYKKEDFSEATLKF 226 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH--------TCSE-E--EETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc--------CCcE-E--EecCChHHHHHHHHH
Confidence 3457889999984 3466666666653 34999999999888877542 1111 1 2222111
Q ss_pred CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 228 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.....+|+++.+-.- + .+....+.|+++|++++...
T Consensus 227 ~~~~~~d~vi~~~G~-----~--~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 227 TKGAGVNLILDCIGG-----S--YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp TTTSCEEEEEESSCG-----G--GHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCceEEEECCCc-----h--HHHHHHHhccCCCEEEEEec
Confidence 112368998865432 2 47788899999999888654
No 401
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.84 E-value=0.16 Score=44.48 Aligned_cols=92 Identities=17% Similarity=0.087 Sum_probs=59.1
Q ss_pred ccCCCeEEEEcC--CcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCC-CCCC--CCcc
Q 020307 159 SAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFA--SGFV 233 (328)
Q Consensus 159 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~--~~~f 233 (328)
..++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. ... ..+ |..+ ..+. -+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~~~--~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL--------GAE-EAA--TYAEVPERAKAWGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT--------TCS-EEE--EGGGHHHHHHHTTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc--------CCC-EEE--ECCcchhHHHHhcCc
Confidence 457889999998 3477777777763 34999999999888777542 111 112 2211 0000 0468
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
|+|+. -. . ..++...+.|+++|+++....
T Consensus 191 d~vid-~g-----~--~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 191 DLVLE-VR-----G--KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EEEEE-CS-----C--TTHHHHHTTEEEEEEEEEC--
T ss_pred eEEEE-CC-----H--HHHHHHHHhhccCCEEEEEeC
Confidence 99886 32 2 357888999999999887543
No 402
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.83 E-value=0.15 Score=46.51 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=56.8
Q ss_pred cCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 160 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
.++.+|+-+|+|. |......++.. +.+|+++|.+++.++.+++.+. ..+.....+...+.-.-...|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g-------~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFC-------GRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTT-------TSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcC-------CeeEeccCCHHHHHHHHcCCCEEEE
Confidence 4678999999865 44444444432 3499999999988777765321 1221111111111100125799987
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
.-.......+.-+.++..+.+||||+++-..
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 4322211122223466778899999887654
No 403
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.71 E-value=0.67 Score=41.39 Aligned_cols=93 Identities=14% Similarity=0.024 Sum_probs=60.7
Q ss_pred ccccCCCeEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC------C
Q 020307 157 FKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------F 228 (328)
Q Consensus 157 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~ 228 (328)
....++.+||-+|+ | .|.++..+++.. +.+|+++ .+++.++.+++. . ...+. +-.++. .
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l--------G--a~~i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL--------G--ATPID-ASREPEDYAAEHT 212 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH--------T--SEEEE-TTSCHHHHHHHHH
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc--------C--CCEec-cCCCHHHHHHHHh
Confidence 34567899999994 4 377777777763 4489999 888888777653 1 11222 211111 1
Q ss_pred CCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 229 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 229 ~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
....+|+|+-.-. . ..+....+.|+++|++++..
T Consensus 213 ~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 213 AGQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp TTSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred cCCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 1246898885432 2 46888899999999988754
No 404
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=90.67 E-value=0.13 Score=38.59 Aligned_cols=30 Identities=23% Similarity=0.575 Sum_probs=24.8
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCcccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (328)
.+-.||.|++.....+. ..+.|+.|++.+.
T Consensus 26 ~lP~CP~C~seytYeDg----------~l~vCPeC~hEW~ 55 (138)
T 2akl_A 26 TLPPCPQCNSEYTYEDG----------ALLVCPECAHEWS 55 (138)
T ss_dssp CSCCCTTTCCCCCEECS----------SSEEETTTTEEEC
T ss_pred cCCCCCCCCCcceEecC----------CeEECCccccccC
Confidence 45679999999877664 4899999999884
No 405
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.51 E-value=0.61 Score=41.38 Aligned_cols=94 Identities=14% Similarity=0.107 Sum_probs=61.3
Q ss_pred cccCCCeEEEEcC--CcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------
Q 020307 158 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 227 (328)
Q Consensus 158 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 227 (328)
...++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. .... . .|..+..
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~--------g~~~-~--~d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL--------GCHH-T--INYSTQDFAEVVREI 209 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TCSE-E--EETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCCE-E--EECCCHHHHHHHHHH
Confidence 3457889999995 4577666666653 34999999999888777652 1111 1 2332211
Q ss_pred CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 228 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.....+|+|+.+.. . ..++...+.|+++|+++....
T Consensus 210 ~~~~~~d~vi~~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 210 TGGKGVDVVYDSIG-----K--DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HTTCCEEEEEECSC-----T--TTHHHHHHTEEEEEEEEECCC
T ss_pred hCCCCCeEEEECCc-----H--HHHHHHHHhhccCCEEEEEec
Confidence 01236899886543 2 357888999999999887654
No 406
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.45 E-value=1.8 Score=37.22 Aligned_cols=104 Identities=20% Similarity=0.197 Sum_probs=68.8
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCC------------HHHHHHHHHHHHhcCcCCCCCeEEEEecCCC
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 225 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 225 (328)
.++++|-.|++.|- ++..|++.|. +|+.+|.+ ...++.+...+... ..++.++.+|+.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhc----CCceEEEEccCCC
Confidence 57789999977652 5566666676 89999987 66666665555443 4578899999876
Q ss_pred CC-----CC-----CCccceEEeccccccCC---Ch--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 226 LP-----FA-----SGFVDAVHAGAALHCWP---SP--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 226 lp-----~~-----~~~fD~i~~~~vl~h~~---d~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.. +. -+.+|+++.+..+.... +. ..+++.+.+.++.+|.++....
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 42 00 13689999876653321 11 1345677777888888776553
No 407
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=90.28 E-value=0.15 Score=34.37 Aligned_cols=30 Identities=23% Similarity=0.692 Sum_probs=21.9
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..+.||.|+..-..... .+++.|..|+..+
T Consensus 25 ~ky~C~fCgk~~vkR~a---------~GIW~C~~C~~~~ 54 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKRGA---------AGIWTCSCCKKTV 54 (72)
T ss_dssp SCBCCSSCCSSCBSBCS---------SSCBCCSSSCCCC
T ss_pred cCccCCCCCCceeEecC---------CCeEECCCCCCEE
Confidence 45789999986433322 2799999998765
No 408
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.27 E-value=0.53 Score=43.52 Aligned_cols=46 Identities=11% Similarity=0.244 Sum_probs=35.2
Q ss_pred CCeEEEEcCCcCHHHHHHHHh----CC-CceEEEEeCCHHHHHHHHHHHHh
Q 020307 162 GGLLVDVSCGSGLFSRKFAKS----GT-YSGVVALDFSENMLRQCYDFIKQ 207 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~----~~-~~~v~g~D~s~~~~~~a~~~~~~ 207 (328)
..+|+|+|.|+|.++..+.+. .+ ..+++.||+|+...+.=++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 469999999999987776543 21 23799999999988777776654
No 409
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.17 E-value=1.8 Score=38.20 Aligned_cols=92 Identities=14% Similarity=0.195 Sum_probs=58.1
Q ss_pred CCeEEEEcCCc-C-HHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEec
Q 020307 162 GGLLVDVSCGS-G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 239 (328)
Q Consensus 162 ~~~vLDiGcG~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~ 239 (328)
..+|.=||+|. | .++..+.+.+...+|+++|.+++.++.+.+. + -+.-...|..++ .-...|+|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G-----~~~~~~~~~~~~--~~~~aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----G-----IIDEGTTSIAKV--EDFSPDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----T-----SCSEEESCTTGG--GGGCCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----C-----CcchhcCCHHHH--hhccCCEEEEe
Confidence 36899999886 3 4566677766544899999999888776542 1 111122333320 12357888865
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEE
Q 020307 240 AALHCWPSPSNAVAEISRILRSGGVFVG 267 (328)
Q Consensus 240 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i 267 (328)
--.. ....+++++...++||.+++-
T Consensus 102 vp~~---~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 102 SPVR---TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp SCGG---GHHHHHHHHHHHSCTTCEEEE
T ss_pred CCHH---HHHHHHHHHhhccCCCcEEEE
Confidence 3322 235678889889999876544
No 410
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.13 E-value=0.41 Score=42.45 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=59.0
Q ss_pred cCCC-eEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecC--CCC-CCCCCcc
Q 020307 160 AQGG-LLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRL-PFASGFV 233 (328)
Q Consensus 160 ~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~l-p~~~~~f 233 (328)
.++. +||-+|+ | .|.++..+++.. +.++++++.+++.++.+++. .....+-..+. ..+ ....+.+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l--------Ga~~v~~~~~~~~~~~~~~~~~~~ 218 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL--------GASEVISREDVYDGTLKALSKQQW 218 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH--------TCSEEEEHHHHCSSCCCSSCCCCE
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCcEEEECCCchHHHHHHhhcCCc
Confidence 3454 8999997 3 377777777652 24899999998877777652 11111111111 111 1223468
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
|+|+-.- .. ..+....+.|+++|++++...
T Consensus 219 d~vid~~-----g~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 219 QGAVDPV-----GG--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEEEESC-----CT--HHHHHHHTTEEEEEEEEECCC
T ss_pred cEEEECC-----cH--HHHHHHHHhhcCCCEEEEEec
Confidence 8887543 33 368889999999999987643
No 411
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.07 E-value=1.5 Score=38.18 Aligned_cols=78 Identities=26% Similarity=0.268 Sum_probs=56.7
Q ss_pred cCCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-----C--
Q 020307 160 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A-- 229 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~-- 229 (328)
..+++||-.|++.|. ++..|++.|. +|+.++.+++.++.+.+.+... ..++.++.+|+.+..- .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQ----GFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHHH
Confidence 357789999987652 5566666666 9999999999888877776654 4578899999876430 0
Q ss_pred ---CCccceEEeccccc
Q 020307 230 ---SGFVDAVHAGAALH 243 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~ 243 (328)
.+.+|+++.+..+.
T Consensus 103 ~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHSSCSEEEECCCCC
T ss_pred HHhCCCCCEEEECCCcC
Confidence 13689999876654
No 412
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.73 E-value=0.96 Score=40.51 Aligned_cols=95 Identities=9% Similarity=-0.019 Sum_probs=61.3
Q ss_pred cccCC--CeEEEEcCC--cCHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----
Q 020307 158 KSAQG--GLLVDVSCG--SGLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 227 (328)
Q Consensus 158 ~~~~~--~~vLDiGcG--~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----- 227 (328)
...++ .+||-.|++ .|..+..+++.. +. +|+++|.+++.++.+++.+ + .. . ..|..+..
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~---g----~~-~--~~d~~~~~~~~~~ 223 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSEL---G----FD-A--AINYKKDNVAEQL 223 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTS---C----CS-E--EEETTTSCHHHHH
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHc---C----Cc-e--EEecCchHHHHHH
Confidence 34567 899999983 366666666654 45 8999999988777665421 1 11 1 12332211
Q ss_pred --CCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 228 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 --~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
...+.+|+++.+-. ...++...+.|+++|++++...
T Consensus 224 ~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 224 RESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 01126898886543 2568889999999999987653
No 413
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.65 E-value=0.25 Score=44.73 Aligned_cols=101 Identities=19% Similarity=0.230 Sum_probs=58.1
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 161 QGGLLVDVSCGS-GLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 161 ~~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
++.+||-+|+|. |.....++.. |. +|+++|.+++.++.+++.... .+.....+...+.-.-..+|+|+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGS-------RVELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-------GSEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCc-------eeEeeeCCHHHHHHHHcCCCEEEE
Confidence 458999999864 4444444443 44 999999999888877765432 121221111111100125899986
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.-.......|.-+.++..+.++|||+++-...
T Consensus 237 ~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 237 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 55443222222224566788999998877554
No 414
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.64 E-value=3.1 Score=35.97 Aligned_cols=104 Identities=16% Similarity=0.234 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHH-HHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSEN-MLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F--- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~-~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~--- 228 (328)
.++++|-.|++.|. ++..|++.|. +|+.++.+.. ..+...+.+... ..++.++.+|+.+.. +
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKE----GVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 57789999977652 4556666666 8999998765 333344434332 457889999987642 1
Q ss_pred --CCCccceEEeccccccCC------Ch--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 229 --ASGFVDAVHAGAALHCWP------SP--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 --~~~~fD~i~~~~vl~h~~------d~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.-+.+|+++.+....+.. +. ..+++.+.+.++.+|.++....
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 014689999875443221 11 1356777788888888776553
No 415
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.61 E-value=1.4 Score=39.60 Aligned_cols=95 Identities=19% Similarity=0.148 Sum_probs=58.1
Q ss_pred cccCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC------CCC-
Q 020307 158 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL------PFA- 229 (328)
Q Consensus 158 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l------p~~- 229 (328)
...++.+||-+|+|. |.++..+++...+.+|+++|.+++-++.+++. ... .++ |..+. ...
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~vi--~~~~~~~~~v~~~~~ 251 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL--------GAD-HVV--DARRDPVKQVMELTR 251 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT--------TCS-EEE--ETTSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh--------CCC-EEE--eccchHHHHHHHHhC
Confidence 345788999999864 66667777653134899999999888887652 111 122 21110 011
Q ss_pred CCccceEEeccccccCCChH-HHHHHHHhcccCCcEEEEEEe
Q 020307 230 SGFVDAVHAGAALHCWPSPS-NAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ~~~fD~i~~~~vl~h~~d~~-~~l~~~~r~LkpgG~l~i~~~ 270 (328)
...+|+|+-.- ..+. ..+....+. ++|+++....
T Consensus 252 g~g~Dvvid~~-----G~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 252 GRGVNVAMDFV-----GSQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp TCCEEEEEESS-----CCHHHHHHGGGGEE--EEEEEEECCC
T ss_pred CCCCcEEEECC-----CCchHHHHHHHhhc--CCCEEEEEeC
Confidence 22689988433 3332 146666666 9999887653
No 416
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=89.50 E-value=0.24 Score=31.64 Aligned_cols=34 Identities=21% Similarity=0.412 Sum_probs=23.0
Q ss_pred CcccCcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 55 ELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 55 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
.++.....||.||+.+..... .+.+.|.+|+..+
T Consensus 13 ki~~~~~fCPkCG~~~~ma~~---------~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 13 KLVRKHRFCPRCGPGVFLAEH---------ADRYSCGRCGYTE 46 (55)
T ss_dssp CCCCSSCCCTTTTTTCCCEEC---------SSEEECTTTCCCE
T ss_pred EEEEccccCcCCCCceeEecc---------CCEEECCCCCCEE
Confidence 344456779999986643221 1589999997665
No 417
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.39 E-value=3.2 Score=35.19 Aligned_cols=106 Identities=20% Similarity=0.221 Sum_probs=71.8
Q ss_pred CCCeEEEEcCCc--C--H-HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC--------
Q 020307 161 QGGLLVDVSCGS--G--L-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 227 (328)
Q Consensus 161 ~~~~vLDiGcG~--G--~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 227 (328)
+++++|--|.++ | . .+..|++.|. +|+..|.+++.++.+.+.+++.+ ..++.++.+|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN---QPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT---CSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC---CCcEEEEEccCCCHHHHHHHHHH
Confidence 578999999643 4 3 5677778876 99999999988888887777654 557888999986632
Q ss_pred --CCCCccceEEeccccccCC---------ChH--------------HHHHHHHhcccCCcEEEEEEec
Q 020307 228 --FASGFVDAVHAGAALHCWP---------SPS--------------NAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 228 --~~~~~fD~i~~~~vl~h~~---------d~~--------------~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
-.-+..|+++.+..+.... +.+ ...+.....++.+|.++.....
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~ 148 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL 148 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 0125789998765432211 111 1234556677889988876643
No 418
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=89.31 E-value=0.14 Score=32.98 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=21.6
Q ss_pred CcccccCCCchhhc---cCCCCccccccccCceeeCCCCcccc
Q 020307 59 DLFSCPICYEPLIR---KGPTGLTLGAIYRSGFKCRKCDKTYS 98 (328)
Q Consensus 59 ~~l~CP~C~~~l~~---~~~~~~~~~~~~~~~~~C~~C~~~~~ 98 (328)
....||.|+..-.. ..-. +-+.-+.-.+.|.+|++.+.
T Consensus 14 ~~~~Cp~Cg~~~~~~~q~Q~r--sadep~T~fy~C~~Cg~~w~ 54 (57)
T 1qyp_A 14 TKITCPKCGNDTAYWWEMQTR--AGDEPSTIFYKCTKCGHTWR 54 (57)
T ss_dssp EECCCTTTCCSEEEEEEECCS--SSSCSSEEEEEESSSCCEEE
T ss_pred eEeECCCCCCCEEEEEEeecc--cCCCCCcEEEEcCCCCCEec
Confidence 35779999984211 0100 11112334789999998763
No 419
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.17 E-value=5.4 Score=33.89 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=50.0
Q ss_pred CeEEEEcCCcCHHHHHHHHh----CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 163 GLLVDVSCGSGLFSRKFAKS----GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 163 ~~vLDiGcG~G~~~~~l~~~----~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
.+||-.|+ |..+..+.+. +. +|++++.++....... ..++.++.+|+.++. -..+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----------~~~~~~~~~D~~d~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW--RIIGTSRNPDQMEAIR----------ASGAEPLLWPGEEPS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHH----------HTTEEEEESSSSCCC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHh----------hCCCeEEEecccccc--cCCCCEEEE
Confidence 58999994 7776666553 44 8999999886554433 247889999998866 456899998
Q ss_pred ccccccCCCh
Q 020307 239 GAALHCWPSP 248 (328)
Q Consensus 239 ~~vl~h~~d~ 248 (328)
........++
T Consensus 70 ~a~~~~~~~~ 79 (286)
T 3ius_A 70 STAPDSGGDP 79 (286)
T ss_dssp CCCCBTTBCH
T ss_pred CCCccccccH
Confidence 7665544444
No 420
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.03 E-value=3.3 Score=35.25 Aligned_cols=105 Identities=22% Similarity=0.265 Sum_probs=68.0
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeC-CHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.++. +....+...+.+... ..++.++.+|+.+.. +.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKAL----GSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56788988877653 4556666666 8888775 455555555555443 457889999987643 00
Q ss_pred ---CCccceEEeccccccCCC-----h--------------HHHHHHHHhcccCCcEEEEEEec
Q 020307 230 ---SGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~h~~d-----~--------------~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
-+..|+++.+..+.+... + ..+.+.+.+.++++|.++.....
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 136899998766543321 1 13457777888888888776653
No 421
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.96 E-value=0.26 Score=44.73 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=53.9
Q ss_pred cCCCeEEEEcCCc-CHHHHHHH-HhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEE
Q 020307 160 AQGGLLVDVSCGS-GLFSRKFA-KSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 237 (328)
Q Consensus 160 ~~~~~vLDiGcG~-G~~~~~l~-~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~ 237 (328)
.++.+|+-+|+|. |......+ ..|. +|+++|.+++.++.+.+.. ...+.....+...+.-.-..+|+|+
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~~-------g~~~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDVF-------GGRVITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT-------TTSEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHhc-------CceEEEecCCHHHHHHHHhCCCEEE
Confidence 3568999999864 44333333 3344 9999999998777665432 1122111111111110012578887
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 238 AGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 238 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
..-.......+.-+.++..+.+|+||+++...
T Consensus 235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred ECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 65433211111123567788899999877644
No 422
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.89 E-value=5.1 Score=35.19 Aligned_cols=125 Identities=13% Similarity=0.154 Sum_probs=78.4
Q ss_pred eEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC-CCccceEEecccc
Q 020307 164 LLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-SGFVDAVHAGAAL 242 (328)
Q Consensus 164 ~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-~~~fD~i~~~~vl 242 (328)
+|||+=||-|.+..-+.+.|. .-+.++|+++...+.-+.+. .-.++.+|+.++... -..+|+++...-.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~---------~~~~~~~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNH---------SAKLIKGDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHC---------CSEEEESCGGGCCGGGSCCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHC---------CCCcccCChhhCCHhhCCcccEEEecCCC
Confidence 799999999999999998874 45789999999888777652 235678898776421 2368998864211
Q ss_pred ---------ccCCChH-HHHHHH---HhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCC
Q 020307 243 ---------HCWPSPS-NAVAEI---SRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGL 309 (328)
Q Consensus 243 ---------~h~~d~~-~~l~~~---~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf 309 (328)
.-+.|+. .++.++ .+.++|. +++.+.... ++ .+...-..+.+.+.|++.|+
T Consensus 72 Q~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~g-----l~---------~~~~~~~~~~i~~~l~~~GY 135 (331)
T 3ubt_Y 72 QSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKG-----MM---------AQRHNKAVQEFIQEFDNAGY 135 (331)
T ss_dssp GGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCG-----GG---------GCTTSHHHHHHHHHHHHHTE
T ss_pred CCcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecc-----cc---------cccccchhhhhhhhhccCCc
Confidence 1234554 344444 4445784 444443321 00 01111223567788899999
Q ss_pred eEEEE
Q 020307 310 TNYTS 314 (328)
Q Consensus 310 ~~v~~ 314 (328)
.+...
T Consensus 136 ~v~~~ 140 (331)
T 3ubt_Y 136 DVHII 140 (331)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76554
No 423
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=88.84 E-value=0.38 Score=42.58 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=58.1
Q ss_pred cCCC-eEEEEcC-C-cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecC-CC-C-CCCCCcc
Q 020307 160 AQGG-LLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CR-L-PFASGFV 233 (328)
Q Consensus 160 ~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~-l-p~~~~~f 233 (328)
.++. +||-+|+ | .|.++..+++.. +.+|++++.+++.++.+++. + ....+-..+. .. . ....+.+
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l----G----a~~~i~~~~~~~~~~~~~~~~~~ 217 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVL----G----AKEVLAREDVMAERIRPLDKQRW 217 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHT----T----CSEEEECC---------CCSCCE
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc----C----CcEEEecCCcHHHHHHHhcCCcc
Confidence 3454 7999997 3 477777777763 34899999998877777652 1 1111111111 00 0 1123468
Q ss_pred ceEEeccccccCCChHHHHHHHHhcccCCcEEEEEEe
Q 020307 234 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
|+|+-.-. . ..+....+.|+++|++++...
T Consensus 218 d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 218 AAAVDPVG-----G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp EEEEECST-----T--TTHHHHHHTEEEEEEEEECSC
T ss_pred cEEEECCc-----H--HHHHHHHHhhccCCEEEEEee
Confidence 98875432 2 247788899999999887643
No 424
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.82 E-value=2.4 Score=36.58 Aligned_cols=102 Identities=19% Similarity=0.188 Sum_probs=70.7
Q ss_pred cCCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC---------
Q 020307 160 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------- 227 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------- 227 (328)
.+++.+|--|.+.|- .+..|++.|. +|+.+|.+++.++.+.+.+ ..+...+.+|+.+..
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHHHH
Confidence 357889999988763 5666777776 9999999999887766554 346678889986632
Q ss_pred -CCCCccceEEeccccccCCC-----h--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 228 -FASGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 228 -~~~~~fD~i~~~~vl~h~~d-----~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
-.-+..|+++.+..+..... + -...+.+.+.|+.+|.++....
T Consensus 98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 01257899998766533321 1 1345777888888888776554
No 425
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.82 E-value=1.8 Score=37.66 Aligned_cols=104 Identities=17% Similarity=0.218 Sum_probs=67.5
Q ss_pred CCCeEEEEcCCc--CH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC-
Q 020307 161 QGGLLVDVSCGS--GL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~--G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 229 (328)
.++++|-.|++. |. ++..|++.|. +|+.+|.++...+...+.... ...+.++.+|+.+.. +.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAES-----LGVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHH-----HTCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHh-----cCCeEEEEcCCCCHHHHHHHHHH
Confidence 467899999754 32 5666777776 899999997655555544443 234678899987642 10
Q ss_pred ----CCccceEEeccccccC---------CCh--------------HHHHHHHHhcccCCcEEEEEEec
Q 020307 230 ----SGFVDAVHAGAALHCW---------PSP--------------SNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 230 ----~~~fD~i~~~~vl~h~---------~d~--------------~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
-+.+|+++.+..+... .+. ..+++.+.+.++.+|.++.....
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~ 170 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY 170 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence 1468999987665321 111 13456677778888888776643
No 426
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=88.78 E-value=2.2 Score=36.11 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.+|.+.+..+...+.+... ..++.++.+|+.+.. +.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQA----GGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 46788888877652 5566667776 8999999998888777766553 457889999987642 00
Q ss_pred --CCccceEEecccccc
Q 020307 230 --SGFVDAVHAGAALHC 244 (328)
Q Consensus 230 --~~~fD~i~~~~vl~h 244 (328)
-+..|+++.+..+..
T Consensus 85 ~~~g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGG 101 (256)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 146899998766543
No 427
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.60 E-value=2.8 Score=36.35 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCC--HHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC-
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS--ENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s--~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 229 (328)
.++++|-.|++.|. ++..|++.|. +|+.+|.+ ....+...+.+... ..++.++.+|+.+.. +.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHT----TCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHc----CCcEEEEEecCCCHHHHHHHHHH
Confidence 46789999976652 4556666676 89998886 33444444444433 457888889986632 00
Q ss_pred ----CCccceEEeccccccC-C-----Ch--------------HHHHHHHHhcccCCcEEEEEEec
Q 020307 230 ----SGFVDAVHAGAALHCW-P-----SP--------------SNAVAEISRILRSGGVFVGTTFL 271 (328)
Q Consensus 230 ----~~~fD~i~~~~vl~h~-~-----d~--------------~~~l~~~~r~LkpgG~l~i~~~~ 271 (328)
-+.+|+++.+..+... . ++ ..+++.+.+.++++|.++.....
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 1478999987665332 1 11 13566777788888887776543
No 428
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.58 E-value=3 Score=35.30 Aligned_cols=105 Identities=8% Similarity=0.095 Sum_probs=66.8
Q ss_pred ccCCCeEEEEcCC--cCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C
Q 020307 159 SAQGGLLVDVSCG--SGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F 228 (328)
Q Consensus 159 ~~~~~~vLDiGcG--~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~ 228 (328)
..++++||-.|++ .|. ++..|++.+. +|+.++.+....+.+++.... ..++.++.+|+.+.. +
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~ 83 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAE-----FGSELVFPCDVADDAQIDALF 83 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHH-----TTCCCEEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHH-----cCCcEEEECCCCCHHHHHHHH
Confidence 3467899999975 442 4566666666 999999886555555444333 345788899987642 0
Q ss_pred -----CCCccceEEeccccccC----------CCh--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 229 -----ASGFVDAVHAGAALHCW----------PSP--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 229 -----~~~~fD~i~~~~vl~h~----------~d~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
.-+.+|+++.+..+... .++ ..+++.+.+.++++|.++....
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 11478999987665331 111 1345667777777888777654
No 429
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=88.45 E-value=0.21 Score=33.62 Aligned_cols=29 Identities=17% Similarity=0.512 Sum_probs=21.8
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
-.+.|+.|+..+..... ...+|+.||+.-
T Consensus 27 v~Y~C~~CG~~~e~~~~----------d~irCp~CG~RI 55 (70)
T 1twf_L 27 LKYICAECSSKLSLSRT----------DAVRCKDCGHRI 55 (70)
T ss_dssp CCEECSSSCCEECCCTT----------STTCCSSSCCCC
T ss_pred EEEECCCCCCcceeCCC----------CCccCCCCCceE
Confidence 45789999998655432 467999999854
No 430
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=88.44 E-value=3.5 Score=35.21 Aligned_cols=78 Identities=17% Similarity=0.295 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeC-------------CHHHHHHHHHHHHhcCcCCCCCeEEEEecCC
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-------------SENMLRQCYDFIKQDNTILTSNLALVRADVC 224 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~-------------s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 224 (328)
.++++|-.|++.|- .+..|++.|. +|+.+|. +.+.++...+.+... ..++.++.+|+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA----NRRIVAAVVDTR 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEECCCC
Confidence 56789999977653 5566667776 9999998 666666665555443 457888999987
Q ss_pred CCC-----CC-----CCccceEEecccccc
Q 020307 225 RLP-----FA-----SGFVDAVHAGAALHC 244 (328)
Q Consensus 225 ~lp-----~~-----~~~fD~i~~~~vl~h 244 (328)
+.. +. -+.+|+++.+..+..
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 642 11 146899998776543
No 431
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.37 E-value=3.8 Score=34.99 Aligned_cols=104 Identities=18% Similarity=0.178 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCC-HHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS-ENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s-~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.++.+ ....+...+.+... ..++.++.+|+.+.. +.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQA----GGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 56789999977653 5566666666 88888654 45555555555443 457888999987642 00
Q ss_pred ---CCccceEEeccccccCCC-----h--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 230 ---SGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~h~~d-----~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
-+..|+++.+..+..... + ..+++.+.+.++++|.++....
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 136899998766533221 1 1356777788888888877654
No 432
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=88.02 E-value=0.15 Score=35.37 Aligned_cols=30 Identities=23% Similarity=0.738 Sum_probs=21.7
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..+.||.|+..-.... ..++|.|..|+..+
T Consensus 34 ~ky~CpfCGk~~vkR~---------a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 34 QKHTCPVCGRKAVKRI---------STGIWQCQKCGATF 63 (83)
T ss_dssp SCBCCSSSCSSCEEEE---------ETTEEEETTTCCEE
T ss_pred cccCCCCCCCceeEec---------CcCeEEcCCCCCEE
Confidence 4578999998643322 23799999998765
No 433
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=87.95 E-value=0.15 Score=39.24 Aligned_cols=28 Identities=29% Similarity=0.555 Sum_probs=24.7
Q ss_pred cccCceeeCCCCccccCccceeeeeccc
Q 020307 83 IYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (328)
Q Consensus 83 ~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 110 (328)
+..+.+.|+.|++.|++++|+++++...
T Consensus 105 v~eg~L~C~~cg~~YPI~dGIP~mL~~e 132 (141)
T 2j6a_A 105 IAEGEMKCRNCGHIYYIKNGIPNLLLPP 132 (141)
T ss_dssp EEEEEEECTTTCCEEEEETTEESSCCCS
T ss_pred ccCCEEECCCCCCcccccCCccCcCCcH
Confidence 4567899999999999999999998763
No 434
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=87.81 E-value=4.6 Score=33.69 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=51.1
Q ss_pred cCCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C-CC
Q 020307 160 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-AS 230 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~ 230 (328)
.++++||-.|++.|- ++..|++.|. +|+.++.+++.++...+.+ ..++.+..+|+.+.. + ..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHHHhc
Confidence 467889988876542 4555666665 9999999988777665543 347888888986532 1 12
Q ss_pred CccceEEeccccc
Q 020307 231 GFVDAVHAGAALH 243 (328)
Q Consensus 231 ~~fD~i~~~~vl~ 243 (328)
+.+|+++.+..+.
T Consensus 83 ~~id~li~~Ag~~ 95 (249)
T 3f9i_A 83 SNLDILVCNAGIT 95 (249)
T ss_dssp SCCSEEEECCC--
T ss_pred CCCCEEEECCCCC
Confidence 4689999876643
No 435
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=87.81 E-value=2.4 Score=39.81 Aligned_cols=59 Identities=15% Similarity=0.183 Sum_probs=44.9
Q ss_pred CCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCC
Q 020307 162 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 226 (328)
Q Consensus 162 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 226 (328)
..+++|+=||.|.+...+.+.|. ..|.++|+++...+.-+.++.. .+...++.+|+.++
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYC-----DPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCC-----CTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhccc-----CCCcceeccchhhh
Confidence 45899999999999999998874 3589999999888777765421 23455677887654
No 436
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.79 E-value=1.2 Score=37.75 Aligned_cols=102 Identities=10% Similarity=0.050 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCcCHHHHH----HHH-hCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-----C-
Q 020307 161 QGGLLVDVSCGSGLFSRK----FAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~----l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~- 229 (328)
++++||-.|+ +|.++.. |++ .+. +|+.++.+....+...+.+... ..++.++.+|+.+... .
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAE----GLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHH
Confidence 3567887774 4555444 444 454 8999999988777666665543 3468889999876420 0
Q ss_pred ----CCccceEEeccccccCC----C-h--------------HHHHHHHHhcccCCcEEEEEE
Q 020307 230 ----SGFVDAVHAGAALHCWP----S-P--------------SNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 230 ----~~~fD~i~~~~vl~h~~----d-~--------------~~~l~~~~r~LkpgG~l~i~~ 269 (328)
-+.+|+|+.+..+.... . + ..+++.+.+.++++|+++...
T Consensus 76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 13689998765543211 1 1 124566666777777776655
No 437
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=87.79 E-value=5.1 Score=34.67 Aligned_cols=78 Identities=21% Similarity=0.283 Sum_probs=53.6
Q ss_pred cCCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCC------------HHHHHHHHHHHHhcCcCCCCCeEEEEecCC
Q 020307 160 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVC 224 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 224 (328)
..++++|-.|++.|. ++..|++.|. +|+.+|.+ ++.++...+.+... ..++.++.+|+.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL----GRRIIASQVDVR 99 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhc----CCceEEEECCCC
Confidence 357789999987653 5566667776 99999987 66666655555543 457889999987
Q ss_pred CCC-----C-----CCCccceEEeccccc
Q 020307 225 RLP-----F-----ASGFVDAVHAGAALH 243 (328)
Q Consensus 225 ~lp-----~-----~~~~fD~i~~~~vl~ 243 (328)
+.. + .-+..|+++.+..+.
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 642 1 014789999876643
No 438
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=87.60 E-value=3.8 Score=34.72 Aligned_cols=106 Identities=15% Similarity=0.243 Sum_probs=63.5
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.++.+++..+...+.+..... ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFE--PQKTLFIQCDVADQQQLRDTFRKVV 81 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSC--GGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhcC--CCceEEEecCCCCHHHHHHHHHHHH
Confidence 45688988866542 4555566665 899999998776655554432110 235788899987632 00
Q ss_pred --CCccceEEeccccccCCChHH-----------HHHHHHhcccC-----CcEEEEEEe
Q 020307 230 --SGFVDAVHAGAALHCWPSPSN-----------AVAEISRILRS-----GGVFVGTTF 270 (328)
Q Consensus 230 --~~~fD~i~~~~vl~h~~d~~~-----------~l~~~~r~Lkp-----gG~l~i~~~ 270 (328)
-+.+|+++.+..+....+... ..+.+.+.++. +|+++....
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 82 DHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp HHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 135799998776544344432 23445555543 577666543
No 439
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.58 E-value=1.3 Score=37.68 Aligned_cols=104 Identities=14% Similarity=0.112 Sum_probs=66.8
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEE-eCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~-D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.+ +.+.+..+...+.+... ..++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKL----GRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTT----TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 46789999977652 5566666666 88887 77777666666655543 457888999987642 00
Q ss_pred ---CCccceEEeccccccC----C--Ch--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 230 ---SGFVDAVHAGAALHCW----P--SP--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~h~----~--d~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
-+..|+++.+...... . ++ ..+.+.+.+.++++|.++....
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 1468999977643311 1 11 1345667777777887776553
No 440
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=87.49 E-value=2.2 Score=38.43 Aligned_cols=93 Identities=8% Similarity=0.000 Sum_probs=58.2
Q ss_pred cCCCeEEEEcCC--cCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CCCCc
Q 020307 160 AQGGLLVDVSCG--SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FASGF 232 (328)
Q Consensus 160 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~~~~ 232 (328)
.++.+||-+|++ .|.++..+++.. +.+|+++. +++-++.+++. . -..++...-.++. ...+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l--------G-a~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR--------G-AEEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT--------T-CSEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc--------C-CcEEEECCCchHHHHHHHHccCC
Confidence 578899999983 588888888874 44888885 78777776652 1 1122221111110 11245
Q ss_pred cceEEeccccccCCChHHHHHHHHhcc-cCCcEEEEEE
Q 020307 233 VDAVHAGAALHCWPSPSNAVAEISRIL-RSGGVFVGTT 269 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l~~~~r~L-kpgG~l~i~~ 269 (328)
+|+|+-.- ..+ ..+....+.| ++||+++...
T Consensus 232 ~d~v~d~~-----g~~-~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCI-----TNV-ESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESS-----CSH-HHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECC-----Cch-HHHHHHHHHhhcCCCEEEEEe
Confidence 88887432 233 4477788888 6999988754
No 441
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=87.48 E-value=3 Score=35.50 Aligned_cols=79 Identities=16% Similarity=0.193 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-----C---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A--- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~--- 229 (328)
.++++|-.|++.|- ++..|++.+. +|+.++.+++.++.+.+.+.... ..++.++.+|+.+... .
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF---GTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 46788888876652 4556666666 89999999988877766654421 4578999999976531 0
Q ss_pred --CCccceEEecccccc
Q 020307 230 --SGFVDAVHAGAALHC 244 (328)
Q Consensus 230 --~~~fD~i~~~~vl~h 244 (328)
-+..|+++.+..+.+
T Consensus 94 ~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHTSCSEEEEECCCCC
T ss_pred HHcCCCCEEEECCCcCC
Confidence 136899998766543
No 442
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=87.46 E-value=0.22 Score=31.15 Aligned_cols=26 Identities=27% Similarity=0.484 Sum_probs=19.9
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
+...||.|++.+. .+.+.|..||+..
T Consensus 13 ~k~iCpkC~a~~~-------------~gaw~CrKCG~~~ 38 (51)
T 3j21_g 13 KKYVCLRCGATNP-------------WGAKKCRKCGYKR 38 (51)
T ss_dssp SEEECTTTCCEEC-------------TTCSSCSSSSSCC
T ss_pred CCccCCCCCCcCC-------------CCceecCCCCCcc
Confidence 4567999998732 1699999998764
No 443
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=87.29 E-value=0.39 Score=31.46 Aligned_cols=32 Identities=19% Similarity=0.434 Sum_probs=24.1
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccccCc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSK 100 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 100 (328)
-.+.|..|+........ ..++|+.||+..+.+
T Consensus 20 v~Y~C~~Cg~~~~l~~~----------~~iRC~~CG~RILyK 51 (63)
T 3h0g_L 20 MIYLCADCGARNTIQAK----------EVIRCRECGHRVMYK 51 (63)
T ss_dssp CCCBCSSSCCBCCCCSS----------SCCCCSSSCCCCCBC
T ss_pred eEEECCCCCCeeecCCC----------CceECCCCCcEEEEE
Confidence 56899999987755322 589999999876443
No 444
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=87.24 E-value=3.9 Score=34.86 Aligned_cols=105 Identities=18% Similarity=0.200 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----------
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------- 227 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------- 227 (328)
+++++|--|.+.|- .+..|++.|. +|+..|.+++.++...+.+... ..++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~----g~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRK----GYDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 57788888877763 5666677776 9999999999888887777664 357888888986632
Q ss_pred CCCCccceEEeccccccCCCh-------------------HHHHHHHHhccc---CCcEEEEEEec
Q 020307 228 FASGFVDAVHAGAALHCWPSP-------------------SNAVAEISRILR---SGGVFVGTTFL 271 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~-------------------~~~l~~~~r~Lk---pgG~l~i~~~~ 271 (328)
-.-+..|+++.+..+.+.... -...+.+.+.++ .+|.++.....
T Consensus 82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~ 147 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL 147 (255)
T ss_dssp HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence 123578999988766443221 123466666662 46777765543
No 445
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.22 E-value=2.6 Score=33.55 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=55.8
Q ss_pred CCeEEEEcCCc-CH-HHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----C-CCCcc
Q 020307 162 GGLLVDVSCGS-GL-FSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----F-ASGFV 233 (328)
Q Consensus 162 ~~~vLDiGcG~-G~-~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~-~~~~f 233 (328)
+.+|+-+|+|. |. ++..|.+. +. +|+++|.+++.++.+++ ..+..+.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~----------~g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRS----------EGRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHH----------TTCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHH----------CCCCEEEcCCCCHHHHHhccCCCCC
Confidence 56899999875 43 34555555 65 89999999988776653 13456677764421 1 12457
Q ss_pred ceEEeccccccCCChH--HHHHHHHhcccCCcEEEEEE
Q 020307 234 DAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 234 D~i~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~ 269 (328)
|+|+..- ++.. ..+-...+.+.|++.++...
T Consensus 107 d~vi~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAM-----PHHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECC-----SSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEeC-----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 8888632 3332 22334455566777777755
No 446
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=87.17 E-value=6.3 Score=33.34 Aligned_cols=79 Identities=16% Similarity=0.106 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C----
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F---- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~---- 228 (328)
.++++|-.|++.|. ++..|++.|. +|+.+|.+++.++...+.+..... ..++.++.+|+.+.. +
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQRFP--GARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHST--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCCHHHHHHHHHHHH
Confidence 46789999977652 5566666666 899999999888877776654210 345889999987642 0
Q ss_pred -CCCccceEEeccccc
Q 020307 229 -ASGFVDAVHAGAALH 243 (328)
Q Consensus 229 -~~~~fD~i~~~~vl~ 243 (328)
.-+..|+++.+..+.
T Consensus 83 ~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 83 RTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHCSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 014689999876653
No 447
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=87.13 E-value=3.6 Score=35.35 Aligned_cols=75 Identities=25% Similarity=0.326 Sum_probs=53.3
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C----
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F---- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~---- 228 (328)
.++++|-.|++.|. ++..|++.|. +|+.+|.+++.++...+.+ ..++.++.+|+.+.. +
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKI-------GCGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH-------CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc-------CCcceEEEecCCCHHHHHHHHHHHH
Confidence 46788988877663 5666777776 9999999988777665543 346788899987642 0
Q ss_pred -CCCccceEEecccccc
Q 020307 229 -ASGFVDAVHAGAALHC 244 (328)
Q Consensus 229 -~~~~fD~i~~~~vl~h 244 (328)
.-+.+|+++.+..+.+
T Consensus 99 ~~~g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVH 115 (277)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 0146899998776544
No 448
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=87.11 E-value=0.18 Score=35.62 Aligned_cols=30 Identities=17% Similarity=0.505 Sum_probs=21.5
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..+.||.|+..-.... ..++|.|..|+..+
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 35 SKYFCEFCGKFAVKRK---------AVGIWGCKDCGKVK 64 (92)
T ss_dssp SCBCCTTTCSSCBEEE---------ETTEEECSSSCCEE
T ss_pred ccccCcccCCCeeEec---------CcceEEcCCCCCEE
Confidence 4578999998643322 23799999998765
No 449
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=87.01 E-value=3.2 Score=35.58 Aligned_cols=76 Identities=14% Similarity=0.129 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC---------
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------- 228 (328)
.++++|-.|++.|- ++..|++.|. +|+.+|.+++..+...+.+... ..++.++.+|+.+...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIAS----GGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHT----TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 56788888876552 4556666666 9999999988777776666543 4578899999876431
Q ss_pred CCCccceEEecccc
Q 020307 229 ASGFVDAVHAGAAL 242 (328)
Q Consensus 229 ~~~~fD~i~~~~vl 242 (328)
..+.+|+++.+..+
T Consensus 106 ~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 106 AIAPVDILVINASA 119 (275)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01478999987665
No 450
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=86.85 E-value=4.8 Score=34.48 Aligned_cols=77 Identities=19% Similarity=0.337 Sum_probs=53.4
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCC----------------HHHHHHHHHHHHhcCcCCCCCeEEEEe
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS----------------ENMLRQCYDFIKQDNTILTSNLALVRA 221 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s----------------~~~~~~a~~~~~~~~~~~~~~i~~~~~ 221 (328)
.++++|-.|++.|- ++..|++.|. +|+.+|.+ .+.++...+.+... ..++.++.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 83 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH----NRRIVTAEV 83 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT----TCCEEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc----CCceEEEEc
Confidence 56789999987653 5666677776 99999987 66666655555443 457889999
Q ss_pred cCCCCC-----C-----CCCccceEEeccccc
Q 020307 222 DVCRLP-----F-----ASGFVDAVHAGAALH 243 (328)
Q Consensus 222 d~~~lp-----~-----~~~~fD~i~~~~vl~ 243 (328)
|+.+.. + .-+.+|+++.+..+.
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 987642 0 014689999876653
No 451
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.80 E-value=9.5 Score=32.37 Aligned_cols=79 Identities=19% Similarity=0.206 Sum_probs=51.6
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 229 (328)
.++++|-.|++.|. ++..|++.+. +|++++.++..++...+.+...+. ..++.++.+|+.+.. +.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGY--PGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--SSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcCC--CceEEEEEecCCCHHHHHHHHHHHH
Confidence 46788988865432 4445555565 899999998877766665554331 245788889987642 00
Q ss_pred --CCccceEEeccccc
Q 020307 230 --SGFVDAVHAGAALH 243 (328)
Q Consensus 230 --~~~fD~i~~~~vl~ 243 (328)
-+.+|+|+.+..+.
T Consensus 107 ~~~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 107 SQHSGVDICINNAGLA 122 (279)
T ss_dssp HHHCCCSEEEECCCCC
T ss_pred HhCCCCCEEEECCCCC
Confidence 13689999876543
No 452
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.77 E-value=1.7 Score=32.90 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=54.2
Q ss_pred CCeEEEEcCCc-CH-HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----CCCCccce
Q 020307 162 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 235 (328)
Q Consensus 162 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 235 (328)
..+|+-+|+|. |. ++..|.+.+. +|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~----------~~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLED----------EGFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHH----------CCCcEEECCCCCHHHHHhCCcccCCE
Confidence 45799999865 32 3344445555 99999999988777654 24677888886532 11246788
Q ss_pred EEeccccccCCChH--HHHHHHHhcccCCcEEEEEE
Q 020307 236 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 236 i~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~ 269 (328)
|+..-. +.. ..+....+.+. ...++...
T Consensus 74 vi~~~~-----~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 74 VLITGS-----DDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp EEECCS-----CHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred EEEecC-----CHHHHHHHHHHHHHhC-CceEEEEE
Confidence 876432 332 23334444455 55555544
No 453
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=86.63 E-value=3.5 Score=34.85 Aligned_cols=74 Identities=24% Similarity=0.292 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C----
Q 020307 161 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F---- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~---- 228 (328)
.++++|-.|++.| .++..|++.|. +|+.+|.+.+.++...+.+ ..++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEI-------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 4678998887654 24556666666 9999999988776665543 346788999987632 0
Q ss_pred -CCCccceEEeccccc
Q 020307 229 -ASGFVDAVHAGAALH 243 (328)
Q Consensus 229 -~~~~fD~i~~~~vl~ 243 (328)
.-+.+|+++.+..+.
T Consensus 78 ~~~g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 78 EHAGGLDILVNNAALF 93 (259)
T ss_dssp HHSSSCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 113689999876653
No 454
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=86.54 E-value=5.5 Score=34.12 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=52.5
Q ss_pred cCCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeC-CHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC-----C-
Q 020307 160 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A- 229 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~- 229 (328)
..++++|-.|++.|- ++..|++.|. +|+.+|. +++.++...+.+... ..++.++.+|+.+... .
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGL----GARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHT----TCCEEEEECCTTSGGGHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHH
Confidence 356788988877652 5566666666 8999995 676666666555543 4578999999976431 0
Q ss_pred ----CCccceEEecccc
Q 020307 230 ----SGFVDAVHAGAAL 242 (328)
Q Consensus 230 ----~~~fD~i~~~~vl 242 (328)
-+..|+++.+..+
T Consensus 101 ~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHSCCCEEEEECC-
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1368999987765
No 455
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=86.44 E-value=0.31 Score=34.63 Aligned_cols=26 Identities=27% Similarity=0.713 Sum_probs=19.5
Q ss_pred ccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 61 FSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 61 l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..||.|++++...+ +.+.|..|+..|
T Consensus 33 ~~CP~Cq~eL~~~g-----------~~~hC~~C~~~f 58 (101)
T 2jne_A 33 LHCPQCQHVLDQDN-----------GHARCRSCGEFI 58 (101)
T ss_dssp CBCSSSCSBEEEET-----------TEEEETTTCCEE
T ss_pred ccCccCCCcceecC-----------CEEECccccchh
Confidence 78999999987744 466688776654
No 456
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=86.40 E-value=0.18 Score=37.20 Aligned_cols=30 Identities=23% Similarity=0.627 Sum_probs=21.3
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..+.||.|+..-..... .++|.|..|+..+
T Consensus 59 akytCPfCGk~~vKR~a---------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDRQG---------TGIWQCSYCDYKF 88 (116)
T ss_dssp SCEECSSSCCEEEEEEE---------TTEEEETTTCCEE
T ss_pred cCCcCCCCCCceeEecC---------ceeEECCCCCCEE
Confidence 56789999984322221 2799999998765
No 457
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.21 E-value=5.7 Score=29.46 Aligned_cols=89 Identities=10% Similarity=0.191 Sum_probs=51.7
Q ss_pred CCeEEEEcCCc-CH-HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----CCCCccce
Q 020307 162 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 235 (328)
Q Consensus 162 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 235 (328)
+.+|+=+|+|. |. ++..|.+.+. +|+++|.+++.++..++. .++.++.+|..+.. ..-..+|+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCE
Confidence 35789998864 32 3344445554 899999998877655432 24456677764321 11245888
Q ss_pred EEeccccccCCCh--HHHHHHHHhcccCCcEEEE
Q 020307 236 VHAGAALHCWPSP--SNAVAEISRILRSGGVFVG 267 (328)
Q Consensus 236 i~~~~vl~h~~d~--~~~l~~~~r~LkpgG~l~i 267 (328)
|+..- ++. ...+..+.+.+.++ .+++
T Consensus 73 vi~~~-----~~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 73 YIAVT-----GKEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred EEEee-----CCchHHHHHHHHHHHcCCC-EEEE
Confidence 88653 233 23455566667775 4444
No 458
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=86.17 E-value=0.27 Score=33.19 Aligned_cols=31 Identities=32% Similarity=0.695 Sum_probs=22.4
Q ss_pred cccccCCCchhhccCCCCccccccccCceeeCCCCccccCcc
Q 020307 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKD 101 (328)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 101 (328)
.+.|| |+..+...... ....|+ ||......+
T Consensus 4 vv~C~-C~~~~~~~~~~---------kT~~C~-CG~~~~~~k 34 (71)
T 1gh9_A 4 IFRCD-CGRALYSREGA---------KTRKCV-CGRTVNVKD 34 (71)
T ss_dssp EEEET-TSCCEEEETTC---------SEEEET-TTEEEECCS
T ss_pred EEECC-CCCEEEEcCCC---------cEEECC-CCCeeeece
Confidence 46899 99877665543 688999 998774443
No 459
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.10 E-value=6.3 Score=33.06 Aligned_cols=77 Identities=21% Similarity=0.305 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecC--CCCC-----C--
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRLP-----F-- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~lp-----~-- 228 (328)
.++++|-.|++.|- ++..|++.|. +|+.+|.+++.++...+.+...+ ..++.++..|+ .+.. +
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGA--TVILLGRNEEKLRQVASHINEET---GRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc---CCCceEEEEecccCCHHHHHHHHHH
Confidence 56789988876652 4556666666 99999999988877766665432 34678888898 3321 0
Q ss_pred ---CCCccceEEecccc
Q 020307 229 ---ASGFVDAVHAGAAL 242 (328)
Q Consensus 229 ---~~~~fD~i~~~~vl 242 (328)
.-+.+|+++.+..+
T Consensus 86 ~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHCSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCcc
Confidence 12478999987665
No 460
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=85.96 E-value=4.8 Score=41.29 Aligned_cols=55 Identities=16% Similarity=0.158 Sum_probs=42.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecC
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 223 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 223 (328)
+..+++|+=||-|.++.-|...|....+.++|+++..++.-+.+ .++..++..|+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N--------~p~~~~~~~DI 593 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN--------NPGSTVFTEDC 593 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH--------CTTSEEECSCH
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh--------CCCCccccccH
Confidence 34589999999999999999887423688999999988877765 44555665554
No 461
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=85.94 E-value=0.22 Score=35.23 Aligned_cols=30 Identities=23% Similarity=0.665 Sum_probs=21.4
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..+.||.|+..-.... ..++|.|..|+..+
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~C~~~~ 64 (92)
T 3izc_m 35 ARYDCSFCGKKTVKRG---------AAGIWTCSCCKKTV 64 (92)
T ss_dssp SCCCCSSSCSSCCEEE---------ETTEEECTTTCCEE
T ss_pred cCCcCCCCCCceeeec---------ccceEEcCCCCCEE
Confidence 4577999997643322 23799999998765
No 462
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.90 E-value=5.4 Score=33.82 Aligned_cols=80 Identities=15% Similarity=0.149 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C-CCC
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-ASG 231 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~~ 231 (328)
.++++|-.|++.|- ++..|++.|. +|+.+|.+++.++...+.+...+. ...+.++.+|+.+.. + .-+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQYP--DAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHCT--TCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CceEEEEecCCCCHHHHHHHHHhcC
Confidence 46788888876542 4555666666 999999999888777666654321 345778888886532 0 124
Q ss_pred ccceEEecccccc
Q 020307 232 FVDAVHAGAALHC 244 (328)
Q Consensus 232 ~fD~i~~~~vl~h 244 (328)
..|+++.+..+.+
T Consensus 85 ~id~lv~nAg~~~ 97 (267)
T 3t4x_A 85 KVDILINNLGIFE 97 (267)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998766543
No 463
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=85.71 E-value=0.3 Score=30.51 Aligned_cols=38 Identities=18% Similarity=0.439 Sum_probs=21.9
Q ss_pred cCcccccCCCchhh---ccCCCCccccccccCceeeCCCCccc
Q 020307 58 GDLFSCPICYEPLI---RKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 58 ~~~l~CP~C~~~l~---~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
+....||.|+..-. ..... +-++-+.-.+.|.+|++.+
T Consensus 7 t~~~~Cp~Cg~~~a~f~q~Q~R--saDE~mT~Fy~C~~Cg~~w 47 (50)
T 1tfi_A 7 TDLFTCGKCKKKNCTYTQVQTR--SADEPMTTFVVCNECGNRW 47 (50)
T ss_dssp CCCSCCSSSCSSCEEEEEECSS--SSSSCCEEEEEESSSCCEE
T ss_pred eCccCCCCCCCCEEEEEEecCc--CCCCCceEEEEcCCCCCeE
Confidence 45678999998421 11111 1111233468899999875
No 464
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.45 E-value=6 Score=33.77 Aligned_cols=79 Identities=22% Similarity=0.236 Sum_probs=54.5
Q ss_pred cCCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeC-------------CHHHHHHHHHHHHhcCcCCCCCeEEEEecC
Q 020307 160 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-------------SENMLRQCYDFIKQDNTILTSNLALVRADV 223 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~-------------s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 223 (328)
..++++|-.|++.|- ++..|++.|. +|+.+|. +++.++...+.+... ..++.++.+|+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv 86 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA--DIIACDICAPVSASVTYAPASPEDLDETARLVEDQ----GRKALTRVLDV 86 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT----TCCEEEEECCT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEEcCC
Confidence 357789999977653 5566667776 9999997 677777666665543 45788899998
Q ss_pred CCCC-----CC-----CCccceEEecccccc
Q 020307 224 CRLP-----FA-----SGFVDAVHAGAALHC 244 (328)
Q Consensus 224 ~~lp-----~~-----~~~fD~i~~~~vl~h 244 (328)
.+.. +. -+..|+++.+..+.+
T Consensus 87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 87 RDDAALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 7642 00 147899998766543
No 465
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=85.44 E-value=0.24 Score=45.12 Aligned_cols=96 Identities=20% Similarity=0.169 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCc-CHHHHHHHH-hCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEec---------C------
Q 020307 161 QGGLLVDVSCGS-GLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD---------V------ 223 (328)
Q Consensus 161 ~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d---------~------ 223 (328)
++.+|+-+|+|. |.....++. .|. +|+++|.++..++.+.+. ...++..+ .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~l----------Ga~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSV----------GAQWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHT----------TCEECCCC-------------CHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc----------CCeEEeccccccccccchhhhhHH
Confidence 678999999986 555444444 454 999999999887777652 11222110 0
Q ss_pred ------CCCCCCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEE
Q 020307 224 ------CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 268 (328)
Q Consensus 224 ------~~lp~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 268 (328)
..+.-.-...|+|+..-.+..-+.|.-+-+++.+.+|||++++=.
T Consensus 251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 251 ERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 001001146899986532222122332347888899998877653
No 466
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=85.36 E-value=0.48 Score=43.49 Aligned_cols=98 Identities=18% Similarity=0.176 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecC-------------CCC
Q 020307 161 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-------------CRL 226 (328)
Q Consensus 161 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-------------~~l 226 (328)
++.+|+-+|+|. |.....++... +.+|+++|.++..++.+++. ...++..+. ..+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~----------G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASL----------GAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHT----------TCEECCCCC----------------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc----------CCceeecccccccccccccchhhhc
Confidence 678999999986 65555555442 34999999999887777652 112211110 001
Q ss_pred C----------CC--CCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 227 P----------FA--SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 227 p----------~~--~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
+ +. -...|+|+..-.+.--+.|.-+-+++.+.+|||.+++=+.
T Consensus 258 s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 258 SGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred chhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 0 00 1357999864322221233334578888999988776543
No 467
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=85.35 E-value=0.19 Score=36.14 Aligned_cols=30 Identities=23% Similarity=0.738 Sum_probs=21.5
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
..+.||.|+..-..... .++|.|..|+..+
T Consensus 35 aky~CpfCgk~~vKR~a---------~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKRAA---------VGIWKCKPCKKII 64 (103)
T ss_dssp SCEECTTTCCEEEEEEE---------TTEEEETTTTEEE
T ss_pred cCCCCCCCCCceeeecC---------cceEEcCCCCCEE
Confidence 45789999986433222 2799999998765
No 468
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=85.31 E-value=4.1 Score=34.74 Aligned_cols=104 Identities=20% Similarity=0.232 Sum_probs=66.4
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEE-eCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~-D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.. +.+....+...+.+... ..++.++.+|+.+.. +.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAA----GGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 46789989877653 5666677776 88776 44555566555555443 457888999987642 00
Q ss_pred ---CCccceEEeccccccCCC-----h--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 230 ---SGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~h~~d-----~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
-+.+|+++.+..+..... + ..+++.+.+.++++|.++....
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 147899998766543221 1 1245677777888888777653
No 469
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.29 E-value=4.3 Score=35.20 Aligned_cols=80 Identities=21% Similarity=0.255 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 229 (328)
.++++|-.|++.|. ++..|++.|. +|+.++.+++.++...+.+...+. ...++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGV-PAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEEecCCCCHHHHHHHHHHHH
Confidence 46678888865542 4455556665 999999998877766665544210 0116888999987642 10
Q ss_pred --CCccceEEeccccc
Q 020307 230 --SGFVDAVHAGAALH 243 (328)
Q Consensus 230 --~~~fD~i~~~~vl~ 243 (328)
-+.+|+++.+..+.
T Consensus 102 ~~~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 102 AKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCcC
Confidence 13689999876543
No 470
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=85.23 E-value=6 Score=32.61 Aligned_cols=79 Identities=22% Similarity=0.202 Sum_probs=53.7
Q ss_pred CCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC----
Q 020307 162 GGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA---- 229 (328)
Q Consensus 162 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~---- 229 (328)
++++|-.|++.|. ++..|++.|. +|+.++.+.+.++...+.+.... ..++.++.+|+.+.. +.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ---GVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc---CCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 4578888866542 4555666665 89999999888777666554221 457889999987642 11
Q ss_pred -CCccceEEeccccccC
Q 020307 230 -SGFVDAVHAGAALHCW 245 (328)
Q Consensus 230 -~~~fD~i~~~~vl~h~ 245 (328)
-+.+|+++.+..+.+.
T Consensus 77 ~~g~id~li~~Ag~~~~ 93 (235)
T 3l77_A 77 RFGDVDVVVANAGLGYF 93 (235)
T ss_dssp HHSSCSEEEECCCCCCC
T ss_pred hcCCCCEEEECCccccc
Confidence 1368999988766443
No 471
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=85.01 E-value=1.9 Score=36.54 Aligned_cols=76 Identities=17% Similarity=0.216 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCcCHHH----HHHHHhCCCceEEEEeC-CHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC-
Q 020307 161 QGGLLVDVSCGSGLFS----RKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~----~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 229 (328)
++++||-.|++ |.++ ..|++.+. +|++++. ++...+...+.+... ..++.++.+|+.+.. +.
T Consensus 20 ~~k~vlItGas-ggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 20 AGKVALTTGAG-RGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKL----GAQGVAIQADISKPSEVVALFDK 92 (274)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHH
Confidence 46688877754 5444 44555565 8999998 777666555555442 346888999987642 10
Q ss_pred ----CCccceEEeccccc
Q 020307 230 ----SGFVDAVHAGAALH 243 (328)
Q Consensus 230 ----~~~fD~i~~~~vl~ 243 (328)
-+.+|+++.+..+.
T Consensus 93 ~~~~~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSGME 110 (274)
T ss_dssp HHHHHSCEEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 13689998776543
No 472
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=84.85 E-value=0.24 Score=33.48 Aligned_cols=30 Identities=23% Similarity=0.704 Sum_probs=21.4
Q ss_pred CcccccCCCchhhccCCCCccccccccCceeeCCCCccc
Q 020307 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
....||.|+..-..... .+++.|..|+..+
T Consensus 26 ~ky~C~fCgk~~vkR~a---------~GIW~C~~C~~~~ 55 (73)
T 1ffk_W 26 KKYKCPVCGFPKLKRAS---------TSIWVCGHCGYKI 55 (73)
T ss_pred cCccCCCCCCceeEEEE---------eEEEECCCCCcEE
Confidence 56789999974332221 2799999998765
No 473
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.66 E-value=3.7 Score=37.71 Aligned_cols=94 Identities=14% Similarity=0.167 Sum_probs=61.7
Q ss_pred CCeEEEEcCCc-CHH-HHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC----CCCCccce
Q 020307 162 GGLLVDVSCGS-GLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 235 (328)
Q Consensus 162 ~~~vLDiGcG~-G~~-~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 235 (328)
..+|+-+|+|. |.. +..|.+.+. .|+++|.+++.++.+++ ..+.++.+|..+.. ..-...|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~----------~g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRK----------FGMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHH----------TTCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHh----------CCCeEEEcCCCCHHHHHhcCCCccCE
Confidence 45788998865 332 333444454 89999999999988774 24567889987642 12346788
Q ss_pred EEeccccccCCChH--HHHHHHHhcccCCcEEEEEEecc
Q 020307 236 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 236 i~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
|++.. +++. ..+....+.+.|+..++....+.
T Consensus 72 viv~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~~ 105 (413)
T 3l9w_A 72 LINAI-----DDPQTNLQLTEMVKEHFPHLQIIARARDV 105 (413)
T ss_dssp EEECC-----SSHHHHHHHHHHHHHHCTTCEEEEEESSH
T ss_pred EEECC-----CChHHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 77643 3443 34556667788888888766543
No 474
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=84.46 E-value=0.44 Score=32.87 Aligned_cols=13 Identities=38% Similarity=1.063 Sum_probs=8.8
Q ss_pred ccccCCCchhhcc
Q 020307 61 FSCPICYEPLIRK 73 (328)
Q Consensus 61 l~CP~C~~~l~~~ 73 (328)
..||.|++++...
T Consensus 3 ~~CP~C~~~l~~~ 15 (81)
T 2jrp_A 3 ITCPVCHHALERN 15 (81)
T ss_dssp CCCSSSCSCCEEC
T ss_pred CCCCCCCCccccC
Confidence 4578887777553
No 475
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=84.26 E-value=4.3 Score=34.58 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCceEEEEeCC------------HHHHHHHHHHHHhcCcCCCCCeEEEEecCCC
Q 020307 161 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 225 (328)
Q Consensus 161 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 225 (328)
.++++|-.|++.| .++..|++.|. +|+.+|.+ .+.++...+.+... ..++.++.+|+.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----GSRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----TCCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhc----CCeEEEEeCCCCC
Confidence 5678999997665 25566666776 89999987 66666555555443 4578999999876
Q ss_pred CC-----CC-----CCccceEEeccccccCCC-h--------------HHHHHHHHhccc---CCcEEEEEEe
Q 020307 226 LP-----FA-----SGFVDAVHAGAALHCWPS-P--------------SNAVAEISRILR---SGGVFVGTTF 270 (328)
Q Consensus 226 lp-----~~-----~~~fD~i~~~~vl~h~~d-~--------------~~~l~~~~r~Lk---pgG~l~i~~~ 270 (328)
.. +. -+..|+++.+..+..... + ..+++.+.+.++ .+|.++....
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS 158 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS 158 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence 42 11 147899998876654322 1 123455555553 2677776554
No 476
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=84.17 E-value=3.9 Score=37.01 Aligned_cols=102 Identities=9% Similarity=0.036 Sum_probs=65.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 161 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
.+.+||.++.+.|.++..++... ++.+.-|--..+..+.++...++. ...+.+.. ..+.+ .+.||+|+...
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~~~~-~~~~~~~~-~~~~~---~~~~~~v~~~l 108 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLNGID-ESSVKFLD-STADY---PQQPGVVLIKV 108 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHTTCC-GGGSEEEE-TTSCC---CSSCSEEEEEC
T ss_pred CCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHcCCC-ccceEecc-ccccc---ccCCCEEEEEc
Confidence 45689999999999998887653 344433665556667777765531 12355433 22332 35799988643
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEEecc
Q 020307 241 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 272 (328)
Q Consensus 241 vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 272 (328)
. .+.......|..+...|+||+.+++...+.
T Consensus 109 p-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 109 P-KTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp C-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred C-CCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 2 222223456888999999999998877654
No 477
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.99 E-value=1.3 Score=41.79 Aligned_cols=89 Identities=12% Similarity=0.041 Sum_probs=54.3
Q ss_pred cCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEe
Q 020307 160 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 238 (328)
Q Consensus 160 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~ 238 (328)
.++++|+-+|+|. |......++.. +.+|+++|.++...+.+++. .... .++.+. + ...|+|+.
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~----------Ga~~--~~l~e~-l--~~aDvVi~ 335 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME----------GFDV--VTVEEA-I--GDADIVVT 335 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----------TCEE--CCHHHH-G--GGCSEEEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----------CCEE--ecHHHH-H--hCCCEEEE
Confidence 4688999999976 55444444442 34999999999877666541 2222 222221 1 35798887
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 239 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 239 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
.-.-.++ +-.+..+.+|+||+++...
T Consensus 336 atgt~~~-----i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 336 ATGNKDI-----IMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp CSSSSCS-----BCHHHHHHSCTTCEEEECS
T ss_pred CCCCHHH-----HHHHHHHhcCCCcEEEEeC
Confidence 5322222 1135667789999887644
No 478
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=83.91 E-value=0.6 Score=42.57 Aligned_cols=43 Identities=21% Similarity=0.087 Sum_probs=31.2
Q ss_pred cCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHH
Q 020307 160 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 203 (328)
Q Consensus 160 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~ 203 (328)
.++.+|+-+|+|. |.....+++.. +.+|+++|.++...+.+++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 3688999999986 55555555543 3489999999877666654
No 479
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.88 E-value=0.5 Score=43.41 Aligned_cols=43 Identities=21% Similarity=0.110 Sum_probs=31.5
Q ss_pred cCCCeEEEEcCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHH
Q 020307 160 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 203 (328)
Q Consensus 160 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~ 203 (328)
.++.+|+-+|+|. |.....+++.. +.+|+++|.++...+.+++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 3678999999986 55555555543 3489999999987776643
No 480
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=83.20 E-value=5.1 Score=34.16 Aligned_cols=85 Identities=8% Similarity=0.107 Sum_probs=50.9
Q ss_pred eEEEEcCCc-CH-HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEeccc
Q 020307 164 LLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 241 (328)
Q Consensus 164 ~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~v 241 (328)
+|.=||+|. |. ++..|.+.+. +|+++|.+++.++.+.+ .+ . ... ...|..+. ...|+|+..--
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~~~----~g---~-~~~-~~~~~~~~----~~~D~vi~av~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAVE----RQ---L-VDE-AGQDLSLL----QTAKIIFLCTP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH----TT---S-CSE-EESCGGGG----TTCSEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHh----CC---C-Ccc-ccCCHHHh----CCCCEEEEECC
Confidence 577899886 33 4555666665 89999999987766543 11 1 111 12233322 35798886432
Q ss_pred cccCCChHHHHHHHHhcccCCcEEE
Q 020307 242 LHCWPSPSNAVAEISRILRSGGVFV 266 (328)
Q Consensus 242 l~h~~d~~~~l~~~~r~LkpgG~l~ 266 (328)
-. ....+++++...++++..++
T Consensus 67 ~~---~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 IQ---LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HH---HHHHHHHHHGGGSCTTCEEE
T ss_pred HH---HHHHHHHHHHhhCCCCCEEE
Confidence 11 12456777878888877554
No 481
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=82.86 E-value=5.1 Score=33.66 Aligned_cols=75 Identities=19% Similarity=0.269 Sum_probs=49.9
Q ss_pred CCeEEEEcCCcC---HHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC----
Q 020307 162 GGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA---- 229 (328)
Q Consensus 162 ~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~---- 229 (328)
++++|-.|++.| .++..|++.+. +|+.++.+++.++...+.+... ..++.++.+|+.+.. +.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQA----GGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 357888886554 24455566665 8999999988776665555442 346888899987632 00
Q ss_pred -CCccceEEecccc
Q 020307 230 -SGFVDAVHAGAAL 242 (328)
Q Consensus 230 -~~~fD~i~~~~vl 242 (328)
-+.+|+++.+..+
T Consensus 76 ~~g~id~lv~nAg~ 89 (256)
T 1geg_A 76 TLGGFDVIVNNAGV 89 (256)
T ss_dssp HTTCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 1368999987654
No 482
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=82.78 E-value=7.1 Score=33.34 Aligned_cols=104 Identities=20% Similarity=0.292 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHH-HHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENM-LRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~-~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
+++++|-.|++.|. ++..|++.|. +|+.++.+... .+...+.+... ..++.++.+|+.+.. +.
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKN----GSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHh----CCCeEEEEcCCCCHHHHHHHHHHH
Confidence 46788888866542 4455555665 89999887543 34333334332 346888889986532 00
Q ss_pred ---CCccceEEeccccccCC-----Ch--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 230 ---SGFVDAVHAGAALHCWP-----SP--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~h~~-----d~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
-+.+|+++.+..+.... ++ ..+++.+.+.|+.+|+++....
T Consensus 102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 14689999876654332 11 1244666777777788777654
No 483
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.32 E-value=6.5 Score=32.38 Aligned_cols=76 Identities=21% Similarity=0.175 Sum_probs=48.1
Q ss_pred cCCCeEEEEcCCcCHHHH----HHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCe-EEEEecCC-CCCCCCCcc
Q 020307 160 AQGGLLVDVSCGSGLFSR----KFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNL-ALVRADVC-RLPFASGFV 233 (328)
Q Consensus 160 ~~~~~vLDiGcG~G~~~~----~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i-~~~~~d~~-~lp~~~~~f 233 (328)
..+++||-.|+ +|..+. .|++.+. +|++++.++...+.... .++ .++.+|+. .+.-.-+.+
T Consensus 19 l~~~~ilVtGa-tG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~ 85 (236)
T 3e8x_A 19 FQGMRVLVVGA-NGKVARYLLSELKNKGH--EPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASI 85 (236)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTC
T ss_pred cCCCeEEEECC-CChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCC
Confidence 35778998885 455444 4445565 99999998876654332 367 88999985 222112468
Q ss_pred ceEEeccccccCCCh
Q 020307 234 DAVHAGAALHCWPSP 248 (328)
Q Consensus 234 D~i~~~~vl~h~~d~ 248 (328)
|+|+.........++
T Consensus 86 D~vi~~ag~~~~~~~ 100 (236)
T 3e8x_A 86 DAVVFAAGSGPHTGA 100 (236)
T ss_dssp SEEEECCCCCTTSCH
T ss_pred CEEEECCCCCCCCCc
Confidence 999987765544444
No 484
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=82.26 E-value=11 Score=31.78 Aligned_cols=77 Identities=19% Similarity=0.192 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEE-eCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~-D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
+++++|-.|++.|. ++..|++.|. +|+.+ +.++...+...+.+... ..++.++.+|+.+.. +.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~--~vv~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY--NIVINYARSKKAALETAEEIEKL----GVKVLVVKANVGQPAKIKEMFQQI 76 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 35678888866542 4555666665 88876 88888777776666543 457889999987642 00
Q ss_pred ---CCccceEEeccccc
Q 020307 230 ---SGFVDAVHAGAALH 243 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~ 243 (328)
-+.+|+++.+..+.
T Consensus 77 ~~~~g~id~lv~nAg~~ 93 (258)
T 3oid_A 77 DETFGRLDVFVNNAASG 93 (258)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 14679999876543
No 485
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=82.06 E-value=6.1 Score=36.80 Aligned_cols=95 Identities=19% Similarity=0.219 Sum_probs=57.7
Q ss_pred CCeEEEEcCCc-CH-HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHh-------cCc-C----CCCCeEEEEecCCCCC
Q 020307 162 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ-------DNT-I----LTSNLALVRADVCRLP 227 (328)
Q Consensus 162 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-------~~~-~----~~~~i~~~~~d~~~lp 227 (328)
-.+|.-||+|. |. ++..++..|. +|+++|.+++.++.+++.+.. .+. . ......+ ..|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE-- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH--
Confidence 45799999987 43 5566666665 899999999988887654321 000 0 0011222 334322
Q ss_pred CCCCccceEEeccccccCCCh---HHHHHHHHhcccCCcEEEE
Q 020307 228 FASGFVDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFVG 267 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~h~~d~---~~~l~~~~r~LkpgG~l~i 267 (328)
-...|+|+..-. .+. ..+++++...++|+.+++.
T Consensus 112 --~~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 --LSTVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --GTTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --HCCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 134688775431 233 4678888889999877654
No 486
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=82.02 E-value=7.3 Score=34.66 Aligned_cols=95 Identities=11% Similarity=0.033 Sum_probs=52.0
Q ss_pred cccCCCeEEEEcC-C-cCHHHHHHHHhCCCceEEE-EeCCHH---HHHHHHHHHHhcCcCCCCCeEEEEe------cCCC
Q 020307 158 KSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVA-LDFSEN---MLRQCYDFIKQDNTILTSNLALVRA------DVCR 225 (328)
Q Consensus 158 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~g-~D~s~~---~~~~a~~~~~~~~~~~~~~i~~~~~------d~~~ 225 (328)
...++.+||-+|+ | .|.++..+++.. +.++++ ++.++. ..+.+++ .| .. .++.. ++.+
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~----lG----a~-~vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKS----LG----AE-HVITEEELRRPEMKN 233 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHH----TT----CS-EEEEHHHHHSGGGGG
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHh----cC----Cc-EEEecCcchHHHHHH
Confidence 3457899999997 3 477888888763 235554 444432 2344433 21 11 12221 1111
Q ss_pred CCCCCCccceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 226 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 226 lp~~~~~fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
+.-..+.+|+|+-. +..+. +.+..+.|+++|+++...
T Consensus 234 ~~~~~~~~Dvvid~-----~g~~~--~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 234 FFKDMPQPRLALNC-----VGGKS--STELLRQLARGGTMVTYG 270 (357)
T ss_dssp TTSSSCCCSEEEES-----SCHHH--HHHHHTTSCTTCEEEECC
T ss_pred HHhCCCCceEEEEC-----CCcHH--HHHHHHhhCCCCEEEEEe
Confidence 11011148888743 22222 346789999999998763
No 487
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=81.91 E-value=7.6 Score=33.25 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCH-HHHHHHHHHHHhcCcCCCCCeEEEEecCCC----CC-----
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSE-NMLRQCYDFIKQDNTILTSNLALVRADVCR----LP----- 227 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~-~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~----lp----- 227 (328)
.++++|-.|++.|. ++..|++.|. +|+.++.++ +.++...+.+.... ..++.++.+|+.+ ..
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKER---SNTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHHS---TTCEEEEECCCSCSTTHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhhc---CCceEEEEeecCCccCCHHHHHHH
Confidence 46788888876542 4555666676 899999987 66655555543111 3478889999876 21
Q ss_pred C-----CCCccceEEecccc
Q 020307 228 F-----ASGFVDAVHAGAAL 242 (328)
Q Consensus 228 ~-----~~~~fD~i~~~~vl 242 (328)
+ .-+.+|+++.+..+
T Consensus 97 ~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 97 INSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHhcCCCCEEEECCCC
Confidence 0 01368999987664
No 488
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=81.90 E-value=5.3 Score=33.46 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.+|.+++.++...+.+ ..++.++.+|+.+.. +.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~ 75 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGA--TVIVSDINAEGAKAAAASI-------GKKARAIAADISDPGSVKALFAEIQ 75 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHH-------CTTEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 46789999977652 5566666666 9999999988777665543 346788888986642 00
Q ss_pred --CCccceEEecccccc
Q 020307 230 --SGFVDAVHAGAALHC 244 (328)
Q Consensus 230 --~~~fD~i~~~~vl~h 244 (328)
-+.+|+++.+..+..
T Consensus 76 ~~~g~id~lv~nAg~~~ 92 (247)
T 3rwb_A 76 ALTGGIDILVNNASIVP 92 (247)
T ss_dssp HHHSCCSEEEECCCCCC
T ss_pred HHCCCCCEEEECCCCCC
Confidence 146899998766543
No 489
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=81.87 E-value=6.3 Score=33.51 Aligned_cols=76 Identities=24% Similarity=0.336 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCC---------
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 228 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------- 228 (328)
+++.+|--|.+.|- .+..|++.|. +|+.+|.+++.++...+.+... ..++.++.+|+.+..-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~----g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGM----GKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 57889999988764 5666677776 9999999999998888887764 4578899999876420
Q ss_pred -CCCccceEEecccc
Q 020307 229 -ASGFVDAVHAGAAL 242 (328)
Q Consensus 229 -~~~~fD~i~~~~vl 242 (328)
.-+..|+++.+..+
T Consensus 80 ~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCcc
Confidence 12578999987654
No 490
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=81.75 E-value=6.3 Score=33.00 Aligned_cols=77 Identities=22% Similarity=0.239 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCcC---HHHHHHHHhCCCceEEEEeC-CHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
++++||-.|++.| .++..|++.+. +|+.++. ++...+...+.+... ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 79 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKV----GGEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHH
Confidence 4668888875543 23444555565 8999998 776666555554432 346788889987632 10
Q ss_pred ---CCccceEEeccccc
Q 020307 230 ---SGFVDAVHAGAALH 243 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~ 243 (328)
-+.+|+++.+..+.
T Consensus 80 ~~~~g~id~li~~Ag~~ 96 (261)
T 1gee_A 80 IKEFGKLDVMINNAGLE 96 (261)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 13689999876543
No 491
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=81.68 E-value=1 Score=36.34 Aligned_cols=41 Identities=20% Similarity=0.360 Sum_probs=23.9
Q ss_pred ccCcccccCCCchhhcc-CCCCccccccccCceeeCCCCccc
Q 020307 57 EGDLFSCPICYEPLIRK-GPTGLTLGAIYRSGFKCRKCDKTY 97 (328)
Q Consensus 57 ~~~~l~CP~C~~~l~~~-~~~~~~~~~~~~~~~~C~~C~~~~ 97 (328)
.+..+.||.|++.-... ....-+-+.-+...+.|.+||+.+
T Consensus 134 ~t~~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~w 175 (178)
T 3po3_S 134 VTDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRW 175 (178)
T ss_dssp CBSSSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCEE
T ss_pred CcCCcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCee
Confidence 35678999999842110 000111122244688999999876
No 492
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=81.55 E-value=6.4 Score=33.76 Aligned_cols=89 Identities=9% Similarity=0.120 Sum_probs=51.3
Q ss_pred CeEEEEcCCc-C-HHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCCCCccceEEecc
Q 020307 163 GLLVDVSCGS-G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 240 (328)
Q Consensus 163 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~i~~~~ 240 (328)
.+|.=||+|. | .++..+.+.++..+|+++|.+++.++.+.+ .+ .......|..+. -...|+|+..-
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g-----~~~~~~~~~~~~---~~~aDvVilav 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RG-----IVDEATADFKVF---AALADVIILAV 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TT-----SCSEEESCTTTT---GGGCSEEEECS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cC-----CcccccCCHHHh---hcCCCEEEEcC
Confidence 4789999886 3 355666666544589999999887766544 11 110122233221 13568887643
Q ss_pred ccccCCChHHHHHHHHhc-ccCCcEEE
Q 020307 241 ALHCWPSPSNAVAEISRI-LRSGGVFV 266 (328)
Q Consensus 241 vl~h~~d~~~~l~~~~r~-LkpgG~l~ 266 (328)
--.. ...+++++... ++++.+++
T Consensus 75 p~~~---~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 75 PIKK---TIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CHHH---HHHHHHHHHTSCCCTTCEEE
T ss_pred CHHH---HHHHHHHHHhcCCCCCCEEE
Confidence 2111 13556667666 77765544
No 493
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=81.41 E-value=2 Score=38.19 Aligned_cols=88 Identities=7% Similarity=-0.040 Sum_probs=54.0
Q ss_pred CeEEEE-cCCc-CHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCCCC--------CCc
Q 020307 163 GLLVDV-SCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA--------SGF 232 (328)
Q Consensus 163 ~~vLDi-GcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~--------~~~ 232 (328)
.+||-. |+|. |..+..+++.. +.+|+++|.+++.++.+++. ... ..+ |.....+. ...
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~--------Ga~-~~~--~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDI--------GAA-HVL--NEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHH--------TCS-EEE--ETTSTTHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCC-EEE--ECCcHHHHHHHHHHhcCCC
Confidence 566654 4442 66666666653 34999999999988888753 111 122 22211111 135
Q ss_pred cceEEeccccccCCChHHHHHHHHhcccCCcEEEEEE
Q 020307 233 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 269 (328)
Q Consensus 233 fD~i~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 269 (328)
+|+|+-.-. ...+..+.+.|+++|++++..
T Consensus 234 ~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 234 PRIFLDAVT-------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CCEEEESSC-------HHHHHHHHHHSCTTCEEEECC
T ss_pred CcEEEECCC-------ChhHHHHHhhhcCCCEEEEEe
Confidence 898885443 123577889999999998865
No 494
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.14 E-value=7.2 Score=33.03 Aligned_cols=101 Identities=25% Similarity=0.288 Sum_probs=62.1
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 229 (328)
.++++|-.|++.|- ++..|++.+. +|+.++.+++.++...+.+ ..++.++.+|+.+.. +.
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAAL-------EAEAIAVVADVSDPKAVEAVFAEAL 75 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTC-------CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------cCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45688888876542 4555566665 9999999987665544321 246788889987642 11
Q ss_pred --CCccceEEeccccccCC-----ChH--------------HHHHHHHhcccCCcEEEEEEe
Q 020307 230 --SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 --~~~fD~i~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~l~i~~~ 270 (328)
-+.+|+++.+..+.... +++ .+.+.+.+.++.+|.++....
T Consensus 76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 137 (263)
T 2a4k_A 76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGS 137 (263)
T ss_dssp HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 13679999876654321 111 234555555644677776553
No 495
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=81.09 E-value=9.1 Score=32.48 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeC-CHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC--
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.++. +....+...+.+... ..++.++.+|+.+.. +.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA--KVAVNYASSAGAADEVVAAIAAA----GGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 46788888866542 4555666666 8988888 666666666555543 457888999987643 00
Q ss_pred ---CCccceEEecccccc
Q 020307 230 ---SGFVDAVHAGAALHC 244 (328)
Q Consensus 230 ---~~~fD~i~~~~vl~h 244 (328)
-+..|+++.+..+..
T Consensus 101 ~~~~g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITR 118 (269)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 136899998766543
No 496
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.99 E-value=3.2 Score=35.36 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC---
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.++.+++.++...+.+..... ...++.++.+|+.+.. +.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGV-SEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccc-CCCceeEEecccCCHHHHHHHHHHHH
Confidence 35678888866442 4455556665 899999998877766555421110 0236788899987632 11
Q ss_pred --CCccceEEecccc
Q 020307 230 --SGFVDAVHAGAAL 242 (328)
Q Consensus 230 --~~~fD~i~~~~vl 242 (328)
-+.+|+++.+..+
T Consensus 82 ~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 82 GKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHSCCCEEEECCC-
T ss_pred HHcCCCCEEEECCCC
Confidence 1368999987654
No 497
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=80.97 E-value=5.7 Score=33.61 Aligned_cols=104 Identities=13% Similarity=0.135 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCcCH---HHHHHHHhCCCceEEEEeCC---HHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----CC
Q 020307 161 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS---ENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA 229 (328)
Q Consensus 161 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s---~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~ 229 (328)
.++++|-.|++.|- ++..|++.|. +|+.++.+ .+.++...+.+... ..++.++.+|+.+.. +.
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQ----GAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTT----TCEEEEEECCCCSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHH
Confidence 56789988876552 3444445555 88888654 34455444444433 347888999987642 10
Q ss_pred -----CCccceEEeccccccCCC-----h--------------HHHHHHHHhcccCCcEEEEEEe
Q 020307 230 -----SGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTF 270 (328)
Q Consensus 230 -----~~~fD~i~~~~vl~h~~d-----~--------------~~~l~~~~r~LkpgG~l~i~~~ 270 (328)
-+..|+++.+..+..... + ..+++.+.+.|+++|.++....
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 147899998766433221 1 1245666677777888776553
No 498
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=80.76 E-value=8.6 Score=27.44 Aligned_cols=58 Identities=10% Similarity=0.182 Sum_probs=40.8
Q ss_pred CChHHHHHHHHhcccCCcEEEEEEeccCCCCcchhhHHHHHhhhccCCCCCHHHHHHHHHHCCCeEEEEEE--eCcEEEE
Q 020307 246 PSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLRERILQNYNYLTEEEIEDLCTSCGLTNYTSKV--QQSFIMF 323 (328)
Q Consensus 246 ~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~--~~~~~~~ 323 (328)
|-|.-..++..+-|++|..|.+..-+. -+.+++.++++..|++++.... .+.|.++
T Consensus 37 P~Pvl~tkkaL~~l~~Ge~L~Vl~dd~----------------------~a~~dI~~~~~~~G~~v~~~e~~~~g~~~i~ 94 (98)
T 1jdq_A 37 PVPDVETKRALQNMKPGEILEVWIDYP----------------------MSKERIPETVKKLGHEVLEIEEVGPSEWKIY 94 (98)
T ss_dssp SHHHHHHHHHHHTCCTTCEEEEEESSC----------------------THHHHHHHHHHHSSCCEEEEEECSSSCEEEE
T ss_pred CHHHHHHHHHHHhCCCCCEEEEEECCc----------------------cHHHHHHHHHHHCCCEEEEEEEecCCEEEEE
Confidence 445555677777899999887766332 1356899999999999988664 3556555
Q ss_pred EE
Q 020307 324 AA 325 (328)
Q Consensus 324 ~a 325 (328)
+.
T Consensus 95 I~ 96 (98)
T 1jdq_A 95 IK 96 (98)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 499
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=80.43 E-value=23 Score=29.05 Aligned_cols=72 Identities=22% Similarity=0.171 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCcCHH----HHHHHHhCCCceEEEEeCCHHHHHHHHHHHHhcCcCCCCCeEEEEecCCCCC-----C-CC
Q 020307 161 QGGLLVDVSCGSGLF----SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-AS 230 (328)
Q Consensus 161 ~~~~vLDiGcG~G~~----~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~ 230 (328)
+++++|-.|++ |.+ +..|++.+. +|++++.++..++...+. ..++.++.+|+.+.. + .-
T Consensus 6 ~~~~vlVTGas-ggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~ 74 (244)
T 1cyd_A 6 SGLRALVTGAG-KGIGRDTVKALHASGA--KVVAVTRTNSDLVSLAKE--------CPGIEPVCVDLGDWDATEKALGGI 74 (244)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--------STTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHh--------ccCCCcEEecCCCHHHHHHHHHHc
Confidence 46788888865 444 444555565 899999988766544332 235667788886532 1 12
Q ss_pred CccceEEeccccc
Q 020307 231 GFVDAVHAGAALH 243 (328)
Q Consensus 231 ~~fD~i~~~~vl~ 243 (328)
+.+|+|+.+..+.
T Consensus 75 ~~id~vi~~Ag~~ 87 (244)
T 1cyd_A 75 GPVDLLVNNAALV 87 (244)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4689999876543
No 500
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=80.37 E-value=1.6 Score=33.34 Aligned_cols=40 Identities=15% Similarity=0.253 Sum_probs=31.2
Q ss_pred CCCCccceEEeccccc--cCCChHHHHHHHHhcccCCcEEEE
Q 020307 228 FASGFVDAVHAGAALH--CWPSPSNAVAEISRILRSGGVFVG 267 (328)
Q Consensus 228 ~~~~~fD~i~~~~vl~--h~~d~~~~l~~~~r~LkpgG~l~i 267 (328)
++..+||.|+...--. +..-|..++..+.+.|||||.|..
T Consensus 55 Lp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4588999999654322 233468999999999999999987
Done!