Query 020312
Match_columns 328
No_of_seqs 137 out of 1517
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 15:00:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020312.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020312hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 2.2E-41 7.6E-46 304.6 30.1 291 1-292 17-320 (475)
2 2bcg_G Secretory pathway GDP d 100.0 2.4E-35 8.2E-40 268.2 27.6 301 1-302 8-316 (453)
3 1d5t_A Guanine nucleotide diss 100.0 1.8E-34 6.2E-39 260.9 29.8 300 1-302 3-305 (433)
4 1vg0_A RAB proteins geranylger 100.0 7.1E-32 2.4E-36 249.3 27.7 285 1-293 5-441 (650)
5 4dgk_A Phytoene dehydrogenase; 100.0 8.6E-31 3E-35 241.8 21.5 276 6-313 3-320 (501)
6 3ka7_A Oxidoreductase; structu 99.9 2.2E-24 7.5E-29 194.9 23.9 259 5-310 1-292 (425)
7 3nrn_A Uncharacterized protein 99.9 1.8E-24 6E-29 195.3 22.6 259 5-310 1-280 (421)
8 4gde_A UDP-galactopyranose mut 99.9 1.2E-25 4.2E-30 207.9 15.2 271 4-309 10-308 (513)
9 1s3e_A Amine oxidase [flavin-c 99.9 1E-23 3.6E-28 195.2 25.0 278 1-309 1-304 (520)
10 3nks_A Protoporphyrinogen oxid 99.9 2.8E-24 9.7E-29 197.0 20.3 272 5-309 3-324 (477)
11 2vvm_A Monoamine oxidase N; FA 99.9 3.1E-24 1E-28 197.7 17.9 275 5-309 40-348 (495)
12 2ivd_A PPO, PPOX, protoporphyr 99.9 3.5E-23 1.2E-27 189.8 23.4 269 4-309 16-328 (478)
13 3i6d_A Protoporphyrinogen oxid 99.9 5E-23 1.7E-27 188.3 13.9 272 1-309 1-321 (470)
14 3lov_A Protoporphyrinogen oxid 99.9 6E-22 2.1E-26 181.5 19.9 272 3-309 3-320 (475)
15 2yg5_A Putrescine oxidase; oxi 99.9 7.2E-22 2.5E-26 179.8 20.0 254 1-287 1-266 (453)
16 1sez_A Protoporphyrinogen oxid 99.9 1.9E-21 6.6E-26 179.4 19.1 277 1-309 10-344 (504)
17 2b9w_A Putative aminooxidase; 99.9 2.1E-20 7.3E-25 168.7 19.2 248 2-287 4-256 (424)
18 3k7m_X 6-hydroxy-L-nicotine ox 99.8 4.5E-20 1.5E-24 166.9 19.0 248 5-286 2-256 (431)
19 4dsg_A UDP-galactopyranose mut 99.8 2.3E-19 7.9E-24 164.1 20.7 265 3-309 8-308 (484)
20 1rsg_A FMS1 protein; FAD bindi 99.8 2.2E-20 7.5E-25 172.7 13.8 236 3-287 7-255 (516)
21 2jae_A L-amino acid oxidase; o 99.8 1.1E-19 3.7E-24 167.1 17.9 288 2-310 9-331 (489)
22 2iid_A L-amino-acid oxidase; f 99.8 1E-18 3.5E-23 160.9 22.2 268 3-309 32-334 (498)
23 3hdq_A UDP-galactopyranose mut 99.8 8.5E-20 2.9E-24 161.4 9.7 250 3-309 28-287 (397)
24 2e1m_A L-glutamate oxidase; L- 99.8 7.4E-18 2.5E-22 147.8 20.3 243 2-269 42-353 (376)
25 1v0j_A UDP-galactopyranose mut 99.8 2.4E-20 8.2E-25 166.6 2.0 235 1-287 4-247 (399)
26 1i8t_A UDP-galactopyranose mut 99.8 2.1E-19 7E-24 158.8 5.7 249 4-308 1-258 (367)
27 2bi7_A UDP-galactopyranose mut 99.8 2E-18 6.9E-23 153.3 10.1 229 3-287 2-236 (384)
28 1b37_A Protein (polyamine oxid 99.7 1.7E-17 5.7E-22 151.8 15.6 241 1-287 1-268 (472)
29 4gut_A Lysine-specific histone 99.6 2.6E-14 8.8E-19 136.7 19.7 73 4-95 336-410 (776)
30 3dje_A Fructosyl amine: oxygen 99.6 1.1E-14 3.8E-19 131.7 15.8 60 232-292 161-224 (438)
31 3qj4_A Renalase; FAD/NAD(P)-bi 99.6 1.4E-14 4.7E-19 126.8 15.2 82 223-309 103-203 (342)
32 3dme_A Conserved exported prot 99.6 3.9E-15 1.3E-19 131.5 10.8 60 232-292 150-212 (369)
33 3nyc_A D-arginine dehydrogenas 99.6 1.7E-14 5.7E-19 128.0 13.6 59 232-292 154-212 (381)
34 3ayj_A Pro-enzyme of L-phenyla 99.6 1.2E-14 4.2E-19 136.4 10.9 79 4-95 56-161 (721)
35 2xag_A Lysine-specific histone 99.5 4.5E-13 1.5E-17 129.1 21.1 60 4-83 278-337 (852)
36 2z3y_A Lysine-specific histone 99.5 3.3E-13 1.1E-17 128.0 19.5 60 4-83 107-166 (662)
37 1y56_B Sarcosine oxidase; dehy 99.5 1.4E-14 4.9E-19 128.6 9.1 60 232-292 149-208 (382)
38 3v76_A Flavoprotein; structura 99.5 1.5E-13 5.3E-18 122.9 14.1 61 226-288 126-186 (417)
39 3ps9_A TRNA 5-methylaminomethy 99.5 6.4E-13 2.2E-17 126.5 18.9 58 232-291 417-475 (676)
40 2oln_A NIKD protein; flavoprot 99.5 5.3E-13 1.8E-17 119.1 16.1 58 232-291 153-210 (397)
41 4at0_A 3-ketosteroid-delta4-5a 99.5 2.5E-13 8.5E-18 125.1 13.5 56 233-288 203-263 (510)
42 1pj5_A N,N-dimethylglycine oxi 99.5 3.6E-13 1.2E-17 131.0 14.9 60 232-292 151-210 (830)
43 3pvc_A TRNA 5-methylaminomethy 99.5 1E-12 3.5E-17 125.3 16.7 57 232-290 412-470 (689)
44 1yvv_A Amine oxidase, flavin-c 99.5 7.8E-13 2.7E-17 115.2 14.4 44 4-47 2-45 (336)
45 2gag_B Heterotetrameric sarcos 99.5 2.7E-12 9.4E-17 114.7 17.5 68 224-292 163-233 (405)
46 2i0z_A NAD(FAD)-utilizing dehy 99.4 1.4E-12 4.9E-17 118.1 14.5 58 231-289 133-191 (447)
47 3da1_A Glycerol-3-phosphate de 99.4 8.5E-13 2.9E-17 122.7 13.0 61 232-293 170-236 (561)
48 2gqf_A Hypothetical protein HI 99.4 2.1E-12 7E-17 115.2 14.1 43 1-43 1-43 (401)
49 3kkj_A Amine oxidase, flavin-c 99.4 2.7E-13 9.1E-18 114.8 7.6 63 4-86 2-64 (336)
50 2uzz_A N-methyl-L-tryptophan o 99.4 3.1E-12 1.1E-16 113.1 14.6 57 232-290 149-205 (372)
51 2gf3_A MSOX, monomeric sarcosi 99.4 8.6E-12 2.9E-16 110.9 15.9 59 232-292 150-208 (389)
52 3axb_A Putative oxidoreductase 99.4 8.6E-12 3E-16 113.1 15.2 60 232-292 181-257 (448)
53 2rgh_A Alpha-glycerophosphate 99.4 4.7E-12 1.6E-16 117.9 12.8 60 232-292 188-253 (571)
54 1ryi_A Glycine oxidase; flavop 99.4 1.3E-12 4.5E-17 115.9 8.5 59 232-292 164-222 (382)
55 1qo8_A Flavocytochrome C3 fuma 99.3 3E-12 1E-16 119.4 10.4 56 232-288 250-311 (566)
56 1y0p_A Fumarate reductase flav 99.3 4.2E-11 1.5E-15 111.8 18.1 57 232-288 255-316 (571)
57 3cgv_A Geranylgeranyl reductas 99.3 1.1E-11 3.6E-16 110.6 12.0 56 233-289 103-162 (397)
58 3nlc_A Uncharacterized protein 99.3 9.4E-12 3.2E-16 114.5 11.8 58 232-290 220-278 (549)
59 2wdq_A Succinate dehydrogenase 99.3 4E-11 1.4E-15 112.0 13.6 56 232-287 143-204 (588)
60 2qcu_A Aerobic glycerol-3-phos 99.3 2.5E-11 8.7E-16 111.5 11.4 59 232-292 149-213 (501)
61 3nix_A Flavoprotein/dehydrogen 99.2 2.1E-11 7E-16 109.6 10.1 57 233-289 107-166 (421)
62 2h88_A Succinate dehydrogenase 99.2 7.4E-11 2.5E-15 110.4 13.3 55 232-287 155-215 (621)
63 1d4d_A Flavocytochrome C fumar 99.2 6.6E-10 2.3E-14 103.6 19.2 56 232-288 255-316 (572)
64 1rp0_A ARA6, thiazole biosynth 99.2 8.7E-11 3E-15 99.8 11.5 41 3-43 38-79 (284)
65 3i3l_A Alkylhalidase CMLS; fla 99.2 2.3E-10 8E-15 106.6 14.5 56 233-289 129-188 (591)
66 2bs2_A Quinol-fumarate reducta 99.2 2.3E-10 7.8E-15 107.9 13.2 55 232-287 158-218 (660)
67 3lxd_A FAD-dependent pyridine 99.1 2.3E-10 7.8E-15 102.6 11.1 58 232-290 194-252 (415)
68 2qa1_A PGAE, polyketide oxygen 99.1 6.2E-10 2.1E-14 102.0 13.8 41 1-41 8-48 (500)
69 2x3n_A Probable FAD-dependent 99.1 3E-10 1E-14 101.3 11.3 58 232-290 107-167 (399)
70 3rp8_A Flavoprotein monooxygen 99.1 2.8E-10 9.5E-15 101.8 10.8 53 232-288 127-180 (407)
71 3ihg_A RDME; flavoenzyme, anth 99.1 6.4E-10 2.2E-14 103.0 13.4 57 232-289 120-183 (535)
72 1chu_A Protein (L-aspartate ox 99.1 3.3E-10 1.1E-14 104.7 11.0 39 4-43 8-46 (540)
73 3e1t_A Halogenase; flavoprotei 99.1 3.8E-10 1.3E-14 103.9 11.2 57 232-289 111-172 (512)
74 3atr_A Conserved archaeal prot 99.1 4.3E-10 1.5E-14 102.0 10.9 54 233-287 101-160 (453)
75 2aqj_A Tryptophan halogenase, 99.1 1.1E-09 3.8E-14 101.5 13.8 56 232-288 165-221 (538)
76 1kf6_A Fumarate reductase flav 99.1 1.2E-10 4.2E-15 108.9 6.8 55 232-287 134-195 (602)
77 3oz2_A Digeranylgeranylglycero 99.1 5.6E-11 1.9E-15 105.6 4.0 40 2-41 2-41 (397)
78 2gmh_A Electron transfer flavo 99.1 1.3E-09 4.4E-14 101.8 13.3 57 233-289 145-217 (584)
79 4ap3_A Steroid monooxygenase; 99.1 1E-09 3.5E-14 101.6 12.3 40 4-43 21-60 (549)
80 2qa2_A CABE, polyketide oxygen 99.1 2.5E-09 8.5E-14 98.0 14.3 38 3-40 11-48 (499)
81 3fg2_P Putative rubredoxin red 99.0 1.2E-09 3.9E-14 97.7 11.8 58 232-290 184-242 (404)
82 3fmw_A Oxygenase; mithramycin, 99.0 5.2E-10 1.8E-14 104.0 8.9 57 232-289 148-207 (570)
83 3gwf_A Cyclohexanone monooxyge 99.0 1E-09 3.6E-14 101.3 10.8 40 4-43 8-48 (540)
84 3qvp_A Glucose oxidase; oxidor 99.0 7.5E-10 2.6E-14 102.7 9.2 35 3-37 18-53 (583)
85 1jnr_A Adenylylsulfate reducta 99.0 5E-09 1.7E-13 98.9 14.6 54 232-286 151-215 (643)
86 2e5v_A L-aspartate oxidase; ar 99.0 4.3E-09 1.5E-13 95.8 13.7 55 232-288 119-175 (472)
87 3t37_A Probable dehydrogenase; 99.0 1.5E-09 5.3E-14 100.3 11.0 36 3-38 16-52 (526)
88 2e4g_A Tryptophan halogenase; 99.0 8E-09 2.7E-13 95.9 15.2 57 232-289 194-252 (550)
89 3fpz_A Thiazole biosynthetic e 99.0 2.4E-10 8.2E-15 99.1 4.4 42 4-45 65-108 (326)
90 3iwa_A FAD-dependent pyridine 99.0 6.7E-09 2.3E-13 94.7 13.8 58 232-290 202-259 (472)
91 3oc4_A Oxidoreductase, pyridin 99.0 1.9E-09 6.5E-14 97.7 9.6 57 232-290 189-245 (452)
92 2zxi_A TRNA uridine 5-carboxym 98.9 3.7E-09 1.3E-13 97.9 10.9 54 233-288 124-179 (637)
93 4gcm_A TRXR, thioredoxin reduc 98.9 5.3E-10 1.8E-14 96.3 4.6 43 1-44 2-45 (312)
94 3ces_A MNMG, tRNA uridine 5-ca 98.9 1.7E-08 5.9E-13 93.8 14.6 54 233-288 125-180 (651)
95 4fk1_A Putative thioredoxin re 98.9 6.2E-10 2.1E-14 95.5 4.7 40 2-42 4-43 (304)
96 3ef6_A Toluene 1,2-dioxygenase 98.9 3.6E-09 1.2E-13 94.7 9.7 56 233-290 186-242 (410)
97 1q1r_A Putidaredoxin reductase 98.9 6.8E-08 2.3E-12 86.9 17.2 57 233-290 192-251 (431)
98 1ju2_A HydroxynitrIle lyase; f 98.9 3E-09 1E-13 98.3 8.4 38 3-41 25-62 (536)
99 1n4w_A CHOD, cholesterol oxida 98.9 1.2E-08 4.2E-13 93.5 12.0 38 3-40 4-41 (504)
100 1coy_A Cholesterol oxidase; ox 98.9 1.1E-08 3.6E-13 94.0 11.5 37 2-38 9-45 (507)
101 1c0p_A D-amino acid oxidase; a 98.9 1.6E-09 5.5E-14 95.3 5.6 41 1-41 3-43 (363)
102 4a5l_A Thioredoxin reductase; 98.9 1.1E-09 3.9E-14 94.1 4.2 38 1-38 1-38 (314)
103 2cdu_A NADPH oxidase; flavoenz 98.8 8.3E-09 2.8E-13 93.5 9.2 58 232-290 191-248 (452)
104 3l8k_A Dihydrolipoyl dehydroge 98.8 1.6E-09 5.5E-14 98.6 3.5 45 1-45 1-45 (466)
105 3urh_A Dihydrolipoyl dehydroge 98.8 2.7E-09 9.1E-14 97.8 4.0 44 2-45 23-66 (491)
106 3ab1_A Ferredoxin--NADP reduct 98.8 2.7E-09 9.4E-14 93.7 3.9 44 1-44 11-54 (360)
107 2jbv_A Choline oxidase; alcoho 98.8 1.4E-08 4.9E-13 93.9 8.9 38 3-40 12-50 (546)
108 3c96_A Flavin-containing monoo 98.8 4.5E-09 1.5E-13 94.1 5.2 41 1-41 1-42 (410)
109 2zbw_A Thioredoxin reductase; 98.8 3E-09 1E-13 92.4 3.8 44 1-44 2-45 (335)
110 3cty_A Thioredoxin reductase; 98.7 6.5E-09 2.2E-13 89.7 4.7 43 1-44 13-55 (319)
111 4dna_A Probable glutathione re 98.7 4.7E-09 1.6E-13 95.4 3.7 57 232-290 211-269 (463)
112 4a9w_A Monooxygenase; baeyer-v 98.7 7E-09 2.4E-13 90.7 4.6 42 3-44 2-43 (357)
113 2xdo_A TETX2 protein; tetracyc 98.7 1E-08 3.5E-13 91.4 5.7 40 2-41 24-63 (398)
114 3jsk_A Cypbp37 protein; octame 98.7 8.3E-09 2.8E-13 88.8 4.8 41 4-44 79-121 (344)
115 3o0h_A Glutathione reductase; 98.7 5E-09 1.7E-13 95.8 3.6 56 233-290 233-289 (484)
116 1gpe_A Protein (glucose oxidas 98.7 3.3E-08 1.1E-12 92.3 9.2 37 3-39 23-60 (587)
117 2gv8_A Monooxygenase; FMO, FAD 98.7 1.3E-08 4.3E-13 92.2 6.0 44 2-45 4-49 (447)
118 1mo9_A ORF3; nucleotide bindin 98.7 9.7E-09 3.3E-13 94.7 5.1 59 233-291 256-318 (523)
119 3itj_A Thioredoxin reductase 1 98.7 8.5E-09 2.9E-13 89.5 4.2 43 3-45 21-67 (338)
120 3f8d_A Thioredoxin reductase ( 98.7 1.1E-08 3.9E-13 88.1 4.8 40 4-45 15-54 (323)
121 2q7v_A Thioredoxin reductase; 98.7 1.1E-08 3.6E-13 88.5 4.5 42 3-45 7-48 (325)
122 2gjc_A Thiazole biosynthetic e 98.7 1.3E-08 4.4E-13 87.1 4.7 41 4-44 65-107 (326)
123 1v59_A Dihydrolipoamide dehydr 98.7 5.5E-09 1.9E-13 95.4 2.6 44 1-44 2-45 (478)
124 3c4n_A Uncharacterized protein 98.7 1.3E-08 4.4E-13 90.9 4.7 57 232-290 172-237 (405)
125 1ojt_A Surface protein; redox- 98.7 7.6E-09 2.6E-13 94.5 3.0 44 1-44 3-46 (482)
126 1zk7_A HGII, reductase, mercur 98.7 1.2E-08 4.3E-13 92.7 4.3 56 233-290 217-272 (467)
127 3lzw_A Ferredoxin--NADP reduct 98.7 1E-08 3.5E-13 88.7 3.6 40 4-43 7-46 (332)
128 2r9z_A Glutathione amide reduc 98.7 1.1E-08 3.7E-13 93.0 3.8 43 1-44 1-43 (463)
129 3g3e_A D-amino-acid oxidase; F 98.6 9.9E-09 3.4E-13 89.8 3.4 37 5-41 1-43 (351)
130 3alj_A 2-methyl-3-hydroxypyrid 98.6 2.1E-08 7.2E-13 88.7 5.4 38 4-41 11-48 (379)
131 3lad_A Dihydrolipoamide dehydr 98.6 1.7E-08 5.7E-13 92.1 4.8 57 233-290 222-281 (476)
132 1ges_A Glutathione reductase; 98.6 1.1E-08 3.7E-13 92.7 3.5 57 233-290 209-266 (450)
133 3pl8_A Pyranose 2-oxidase; sub 98.6 2.2E-08 7.5E-13 94.0 5.2 43 1-43 43-85 (623)
134 1trb_A Thioredoxin reductase; 98.6 1.4E-08 4.9E-13 87.4 3.5 57 233-290 185-248 (320)
135 3qfa_A Thioredoxin reductase 1 98.6 2E-08 7E-13 92.5 4.6 43 3-45 31-81 (519)
136 2cul_A Glucose-inhibited divis 98.6 2.5E-08 8.4E-13 82.0 4.5 52 235-288 71-124 (232)
137 1w4x_A Phenylacetone monooxyge 98.6 2.9E-08 9.8E-13 92.0 5.1 42 3-44 15-56 (542)
138 2vdc_G Glutamate synthase [NAD 98.6 2.8E-08 9.5E-13 89.9 4.8 40 4-43 122-161 (456)
139 4hb9_A Similarities with proba 98.6 3.1E-08 1E-12 88.4 5.0 36 4-39 1-36 (412)
140 2hqm_A GR, grase, glutathione 98.6 1.8E-08 6.2E-13 91.9 3.5 58 233-290 227-286 (479)
141 3d1c_A Flavin-containing putat 98.6 2.5E-08 8.5E-13 87.7 4.2 40 3-43 3-43 (369)
142 2qae_A Lipoamide, dihydrolipoy 98.6 2.1E-08 7.2E-13 91.2 3.8 41 4-44 2-42 (468)
143 2vou_A 2,6-dihydroxypyridine h 98.6 3.8E-08 1.3E-12 87.6 5.4 37 3-39 4-40 (397)
144 3ic9_A Dihydrolipoamide dehydr 98.6 2.1E-08 7.1E-13 91.8 3.7 40 4-44 8-47 (492)
145 2wpf_A Trypanothione reductase 98.6 1.6E-08 5.4E-13 92.7 2.8 57 233-290 236-293 (495)
146 3r9u_A Thioredoxin reductase; 98.6 2.5E-08 8.6E-13 85.6 3.8 42 3-45 3-45 (315)
147 1dxl_A Dihydrolipoamide dehydr 98.6 3.2E-08 1.1E-12 90.1 4.7 43 2-44 4-46 (470)
148 3dk9_A Grase, GR, glutathione 98.6 2.2E-08 7.6E-13 91.4 3.2 42 3-45 19-60 (478)
149 1zmd_A Dihydrolipoyl dehydroge 98.6 2.6E-08 8.9E-13 90.8 3.4 42 3-44 5-46 (474)
150 3k30_A Histamine dehydrogenase 98.6 4.2E-08 1.4E-12 93.5 5.0 43 3-45 390-432 (690)
151 3dgz_A Thioredoxin reductase 2 98.6 3.8E-08 1.3E-12 90.1 4.4 43 3-45 5-55 (488)
152 2a87_A TRXR, TR, thioredoxin r 98.5 3.9E-08 1.3E-12 85.4 4.0 42 2-44 12-53 (335)
153 2bry_A NEDD9 interacting prote 98.5 6.4E-08 2.2E-12 88.6 5.5 40 3-42 91-130 (497)
154 1vdc_A NTR, NADPH dependent th 98.5 2.9E-08 9.9E-13 86.0 3.1 41 4-44 8-52 (333)
155 2yqu_A 2-oxoglutarate dehydrog 98.5 3.6E-08 1.2E-12 89.4 3.7 57 232-290 208-265 (455)
156 3fbs_A Oxidoreductase; structu 98.5 5.3E-08 1.8E-12 82.8 4.4 56 229-290 171-227 (297)
157 3uox_A Otemo; baeyer-villiger 98.5 6.1E-08 2.1E-12 89.7 5.1 41 4-44 9-49 (545)
158 2r0c_A REBC; flavin adenine di 98.5 6.9E-08 2.3E-12 89.6 5.2 38 4-41 26-63 (549)
159 1fec_A Trypanothione reductase 98.5 4.6E-08 1.6E-12 89.5 3.8 57 233-290 232-289 (490)
160 1k0i_A P-hydroxybenzoate hydro 98.5 5.6E-08 1.9E-12 86.4 4.3 35 4-38 2-36 (394)
161 2dkh_A 3-hydroxybenzoate hydro 98.5 8.8E-08 3E-12 90.4 5.6 39 2-40 30-69 (639)
162 2a8x_A Dihydrolipoyl dehydroge 98.5 4.5E-08 1.5E-12 89.0 3.3 41 3-44 2-42 (464)
163 2xve_A Flavin-containing monoo 98.5 9.3E-08 3.2E-12 86.8 5.0 41 5-45 3-49 (464)
164 2q0l_A TRXR, thioredoxin reduc 98.5 9.4E-08 3.2E-12 81.9 4.8 39 5-44 2-41 (311)
165 3c4a_A Probable tryptophan hyd 98.5 8.8E-08 3E-12 84.7 4.6 35 5-39 1-37 (381)
166 3dgh_A TRXR-1, thioredoxin red 98.5 9.3E-08 3.2E-12 87.3 4.6 57 233-290 228-290 (483)
167 2eq6_A Pyruvate dehydrogenase 98.5 6E-08 2.1E-12 88.1 3.3 39 4-43 6-44 (464)
168 1o94_A Tmadh, trimethylamine d 98.4 1.3E-07 4.3E-12 90.7 5.3 42 4-45 389-430 (729)
169 3ihm_A Styrene monooxygenase A 98.4 9.7E-08 3.3E-12 85.9 3.9 34 4-37 22-55 (430)
170 1lvl_A Dihydrolipoamide dehydr 98.4 7.3E-08 2.5E-12 87.4 3.0 40 4-44 5-44 (458)
171 1ebd_A E3BD, dihydrolipoamide 98.4 9.1E-08 3.1E-12 86.7 3.6 40 3-43 2-41 (455)
172 1xdi_A RV3303C-LPDA; reductase 98.4 6.9E-08 2.4E-12 88.6 2.7 56 233-290 224-280 (499)
173 3cp8_A TRNA uridine 5-carboxym 98.4 1.6E-07 5.4E-12 87.4 4.7 39 3-41 20-59 (641)
174 3gyx_A Adenylylsulfate reducta 98.4 1.5E-07 5.3E-12 88.6 4.6 54 232-286 166-230 (662)
175 2pyx_A Tryptophan halogenase; 98.4 1.6E-07 5.3E-12 86.8 4.3 56 232-288 175-232 (526)
176 1onf_A GR, grase, glutathione 98.4 1.4E-07 4.9E-12 86.5 3.9 57 233-290 218-276 (500)
177 1fl2_A Alkyl hydroperoxide red 98.4 2.1E-07 7.3E-12 79.7 4.6 39 4-44 1-39 (310)
178 1y56_A Hypothetical protein PH 98.4 1.1E-07 3.8E-12 87.0 2.8 41 4-45 108-148 (493)
179 2ywl_A Thioredoxin reductase r 98.4 2.5E-07 8.5E-12 72.6 4.2 33 5-37 2-34 (180)
180 1ps9_A 2,4-dienoyl-COA reducta 98.4 3.2E-07 1.1E-11 87.2 5.7 41 4-44 373-413 (671)
181 3s5w_A L-ornithine 5-monooxyge 98.3 1.9E-07 6.5E-12 84.8 3.4 39 4-42 30-73 (463)
182 2gag_A Heterotetrameric sarcos 98.3 2E-07 6.8E-12 91.9 3.7 41 4-44 128-168 (965)
183 3g5s_A Methylenetetrahydrofola 98.3 4.6E-07 1.6E-11 78.7 5.4 36 5-40 2-37 (443)
184 4b1b_A TRXR, thioredoxin reduc 98.3 2.4E-07 8.3E-12 85.3 3.8 57 232-290 263-320 (542)
185 3q9t_A Choline dehydrogenase a 98.3 4.1E-07 1.4E-11 84.5 5.0 36 3-38 5-41 (577)
186 2weu_A Tryptophan 5-halogenase 98.3 2.2E-07 7.4E-12 85.5 3.1 56 232-288 173-229 (511)
187 3kd9_A Coenzyme A disulfide re 98.3 3.8E-07 1.3E-11 82.5 4.6 55 233-290 191-245 (449)
188 1lqt_A FPRA; NADP+ derivative, 98.3 3.7E-07 1.3E-11 82.6 4.1 41 3-43 2-49 (456)
189 1gte_A Dihydropyrimidine dehyd 98.3 5.1E-07 1.7E-11 89.6 5.1 40 4-43 187-227 (1025)
190 2v3a_A Rubredoxin reductase; a 98.3 5.9E-07 2E-11 79.5 4.8 56 233-290 188-244 (384)
191 1hyu_A AHPF, alkyl hydroperoxi 98.3 5.7E-07 1.9E-11 82.9 4.8 40 3-44 211-250 (521)
192 1kdg_A CDH, cellobiose dehydro 98.2 6.6E-07 2.2E-11 83.0 4.7 36 3-38 6-41 (546)
193 2x8g_A Thioredoxin glutathione 98.2 5.9E-07 2E-11 84.2 4.0 34 3-36 106-139 (598)
194 3h28_A Sulfide-quinone reducta 98.2 7.3E-07 2.5E-11 80.1 4.1 39 5-43 3-43 (430)
195 1m6i_A Programmed cell death p 98.2 8E-07 2.7E-11 81.3 4.5 56 233-290 227-283 (493)
196 3ics_A Coenzyme A-disulfide re 98.2 8.6E-07 2.9E-11 83.0 4.7 55 232-290 228-283 (588)
197 1pn0_A Phenol 2-monooxygenase; 98.2 1E-06 3.5E-11 83.4 5.1 36 4-39 8-48 (665)
198 2gqw_A Ferredoxin reductase; f 98.2 1.3E-06 4.4E-11 78.0 4.6 52 233-290 188-240 (408)
199 1cjc_A Protein (adrenodoxin re 98.2 1.3E-06 4.5E-11 79.0 4.6 41 3-43 5-47 (460)
200 3sx6_A Sulfide-quinone reducta 98.2 1.3E-06 4.3E-11 78.8 4.4 39 1-39 1-42 (437)
201 3h8l_A NADH oxidase; membrane 98.1 8.4E-07 2.9E-11 79.2 3.2 53 233-291 219-272 (409)
202 1nhp_A NADH peroxidase; oxidor 98.1 1.6E-06 5.6E-11 78.3 4.4 56 233-290 192-247 (447)
203 2bc0_A NADH oxidase; flavoprot 98.1 1.8E-06 6.1E-11 79.0 4.0 56 233-290 237-292 (490)
204 3cgb_A Pyridine nucleotide-dis 98.1 2.4E-06 8.2E-11 77.9 4.4 56 233-290 228-283 (480)
205 3fim_B ARYL-alcohol oxidase; A 98.1 1.9E-06 6.4E-11 79.8 3.7 36 4-39 2-38 (566)
206 1xhc_A NADH oxidase /nitrite r 98.1 3E-06 1E-10 74.4 4.7 35 5-40 9-43 (367)
207 3ntd_A FAD-dependent pyridine 98.1 2.6E-06 9E-11 79.3 4.6 58 233-290 193-268 (565)
208 3klj_A NAD(FAD)-dependent dehy 98.0 4.6E-06 1.6E-10 73.7 5.2 39 3-41 8-46 (385)
209 1ges_A Glutathione reductase; 97.9 5.4E-05 1.9E-09 68.3 10.9 34 5-38 168-201 (450)
210 3hyw_A Sulfide-quinone reducta 97.8 9.2E-06 3.2E-10 72.9 3.9 55 232-290 200-257 (430)
211 4g6h_A Rotenone-insensitive NA 97.8 1.1E-05 3.8E-10 73.8 4.4 35 4-38 42-76 (502)
212 4eqs_A Coenzyme A disulfide re 97.8 1.1E-05 3.7E-10 72.6 4.3 53 232-290 188-241 (437)
213 2hqm_A GR, grase, glutathione 97.8 0.00015 5E-09 66.0 10.8 34 5-38 186-219 (479)
214 3vrd_B FCCB subunit, flavocyto 97.8 1.5E-05 5.2E-10 70.7 4.0 47 242-290 212-259 (401)
215 1onf_A GR, grase, glutathione 97.8 0.00025 8.6E-09 64.8 12.2 34 5-38 177-210 (500)
216 4b63_A L-ornithine N5 monooxyg 97.4 2.9E-05 9.9E-10 71.1 0.1 33 5-37 40-72 (501)
217 1nhp_A NADH peroxidase; oxidor 97.0 0.00062 2.1E-08 61.3 5.4 39 3-41 148-186 (447)
218 3klj_A NAD(FAD)-dependent dehy 97.0 0.00058 2E-08 60.2 4.5 38 5-42 147-184 (385)
219 4gcm_A TRXR, thioredoxin reduc 96.9 0.00072 2.5E-08 57.6 4.8 36 5-40 146-181 (312)
220 1lss_A TRK system potassium up 96.9 0.00078 2.7E-08 49.8 4.4 33 4-36 4-36 (140)
221 2g1u_A Hypothetical protein TM 96.8 0.0012 4E-08 50.0 4.6 34 4-37 19-52 (155)
222 1lvl_A Dihydrolipoamide dehydr 96.8 0.00095 3.3E-08 60.3 4.4 37 5-41 172-208 (458)
223 2eq6_A Pyruvate dehydrogenase 96.8 0.0011 3.9E-08 59.9 4.7 37 5-41 170-206 (464)
224 2yqu_A 2-oxoglutarate dehydrog 96.7 0.0013 4.3E-08 59.4 4.7 36 5-40 168-203 (455)
225 2v3a_A Rubredoxin reductase; a 96.7 0.0015 5.2E-08 57.4 5.0 39 4-42 145-183 (384)
226 4e12_A Diketoreductase; oxidor 96.7 0.0017 5.8E-08 54.6 5.0 37 1-37 1-37 (283)
227 1xhc_A NADH oxidase /nitrite r 96.7 0.0014 4.7E-08 57.4 4.6 37 5-41 144-180 (367)
228 1ebd_A E3BD, dihydrolipoamide 96.7 0.0014 4.7E-08 59.1 4.7 38 4-41 170-207 (455)
229 1id1_A Putative potassium chan 96.7 0.0021 7.3E-08 48.5 4.9 33 4-36 3-35 (153)
230 3llv_A Exopolyphosphatase-rela 96.6 0.0019 6.5E-08 47.9 4.5 33 5-37 7-39 (141)
231 3fwz_A Inner membrane protein 96.6 0.0018 6.1E-08 48.1 4.3 33 5-37 8-40 (140)
232 1v59_A Dihydrolipoamide dehydr 96.6 0.0017 5.9E-08 58.9 5.0 37 5-41 184-220 (478)
233 1bg6_A N-(1-D-carboxylethyl)-L 96.6 0.0016 5.6E-08 56.6 4.5 36 1-36 1-36 (359)
234 4a5l_A Thioredoxin reductase; 96.6 0.0021 7.2E-08 54.6 5.1 35 5-39 153-187 (314)
235 2gqw_A Ferredoxin reductase; f 96.5 0.0031 1.1E-07 56.0 5.7 39 4-42 145-183 (408)
236 3ic5_A Putative saccharopine d 96.4 0.0029 9.8E-08 45.1 4.2 32 5-36 6-38 (118)
237 2r9z_A Glutathione amide reduc 96.4 0.0026 8.9E-08 57.5 4.7 36 5-40 167-202 (463)
238 3ado_A Lambda-crystallin; L-gu 96.4 0.0026 8.8E-08 54.1 4.2 33 5-37 7-39 (319)
239 2ewd_A Lactate dehydrogenase,; 96.3 0.0031 1E-07 53.9 4.5 37 1-37 1-38 (317)
240 3i83_A 2-dehydropantoate 2-red 96.3 0.0035 1.2E-07 53.7 4.7 33 5-37 3-35 (320)
241 2x5o_A UDP-N-acetylmuramoylala 96.3 0.0026 9E-08 57.0 4.0 37 4-40 5-41 (439)
242 3cgb_A Pyridine nucleotide-dis 96.3 0.0023 7.8E-08 58.1 3.6 38 4-41 186-223 (480)
243 2bc0_A NADH oxidase; flavoprot 96.3 0.0033 1.1E-07 57.2 4.7 38 4-41 194-231 (490)
244 1zmd_A Dihydrolipoyl dehydroge 96.3 0.0036 1.2E-07 56.7 4.7 37 5-41 179-215 (474)
245 1f0y_A HCDH, L-3-hydroxyacyl-C 96.3 0.0043 1.5E-07 52.6 4.9 33 5-37 16-48 (302)
246 3ic9_A Dihydrolipoamide dehydr 96.3 0.0042 1.4E-07 56.6 5.1 38 5-42 175-212 (492)
247 1ojt_A Surface protein; redox- 96.2 0.003 1E-07 57.3 4.2 37 5-41 186-222 (482)
248 3lk7_A UDP-N-acetylmuramoylala 96.2 0.0038 1.3E-07 56.2 4.7 34 4-37 9-42 (451)
249 1q1r_A Putidaredoxin reductase 96.2 0.0055 1.9E-07 54.8 5.7 39 4-42 149-187 (431)
250 2a8x_A Dihydrolipoyl dehydroge 96.2 0.004 1.4E-07 56.2 4.7 37 5-41 172-208 (464)
251 3hn2_A 2-dehydropantoate 2-red 96.2 0.0039 1.3E-07 53.2 4.3 33 5-37 3-35 (312)
252 3qha_A Putative oxidoreductase 96.2 0.0044 1.5E-07 52.4 4.6 37 2-38 13-49 (296)
253 1t2d_A LDH-P, L-lactate dehydr 96.2 0.005 1.7E-07 52.6 4.9 37 1-37 1-38 (322)
254 3c85_A Putative glutathione-re 96.2 0.0044 1.5E-07 48.2 4.2 33 5-37 40-73 (183)
255 3ef6_A Toluene 1,2-dioxygenase 96.1 0.0058 2E-07 54.2 5.4 38 4-41 143-180 (410)
256 3l4b_C TRKA K+ channel protien 96.1 0.0038 1.3E-07 50.2 3.7 33 5-37 1-33 (218)
257 3ghy_A Ketopantoate reductase 96.1 0.0049 1.7E-07 53.1 4.6 33 4-36 3-35 (335)
258 2q0l_A TRXR, thioredoxin reduc 96.1 0.0053 1.8E-07 52.0 4.8 35 5-39 144-178 (311)
259 3d1c_A Flavin-containing putat 96.1 0.0043 1.5E-07 53.9 4.2 36 5-40 167-202 (369)
260 3kd9_A Coenzyme A disulfide re 96.1 0.0057 1.9E-07 55.0 5.0 38 5-42 149-186 (449)
261 1fl2_A Alkyl hydroperoxide red 96.0 0.0056 1.9E-07 51.8 4.6 35 5-39 145-179 (310)
262 4e21_A 6-phosphogluconate dehy 96.0 0.0056 1.9E-07 53.1 4.5 37 1-37 19-55 (358)
263 4eqs_A Coenzyme A disulfide re 96.0 0.0045 1.5E-07 55.4 4.1 38 5-42 148-185 (437)
264 3g79_A NDP-N-acetyl-D-galactos 96.0 0.0051 1.8E-07 55.4 4.4 36 3-38 17-54 (478)
265 2cul_A Glucose-inhibited divis 96.0 0.019 6.6E-07 46.4 7.5 35 3-37 2-36 (232)
266 1dxl_A Dihydrolipoamide dehydr 96.0 0.0036 1.2E-07 56.6 3.3 37 5-41 178-214 (470)
267 2hmt_A YUAA protein; RCK, KTN, 96.0 0.0053 1.8E-07 45.4 3.7 32 5-36 7-38 (144)
268 3gg2_A Sugar dehydrogenase, UD 96.0 0.006 2E-07 54.7 4.6 33 5-37 3-35 (450)
269 2y0c_A BCEC, UDP-glucose dehyd 96.0 0.0058 2E-07 55.3 4.5 33 4-36 8-40 (478)
270 2q7v_A Thioredoxin reductase; 95.9 0.007 2.4E-07 51.7 4.8 36 5-40 153-188 (325)
271 2cdu_A NADPH oxidase; flavoenz 95.9 0.0064 2.2E-07 54.7 4.7 37 5-41 150-186 (452)
272 1vdc_A NTR, NADPH dependent th 95.9 0.0069 2.4E-07 51.8 4.7 35 5-39 160-194 (333)
273 1pzg_A LDH, lactate dehydrogen 95.9 0.0067 2.3E-07 52.1 4.5 33 5-37 10-43 (331)
274 4g65_A TRK system potassium up 95.9 0.0049 1.7E-07 55.5 3.8 35 3-37 2-36 (461)
275 2qae_A Lipoamide, dihydrolipoy 95.9 0.0068 2.3E-07 54.8 4.7 37 5-41 175-211 (468)
276 1ks9_A KPA reductase;, 2-dehyd 95.9 0.0075 2.6E-07 50.6 4.7 33 6-38 2-34 (291)
277 2xve_A Flavin-containing monoo 95.9 0.0062 2.1E-07 55.0 4.4 36 5-40 198-233 (464)
278 2dpo_A L-gulonate 3-dehydrogen 95.9 0.0068 2.3E-07 51.7 4.3 33 5-37 7-39 (319)
279 2zbw_A Thioredoxin reductase; 95.9 0.0077 2.6E-07 51.6 4.7 37 5-41 153-189 (335)
280 2a87_A TRXR, TR, thioredoxin r 95.9 0.0081 2.8E-07 51.6 4.8 36 4-39 155-190 (335)
281 3fg2_P Putative rubredoxin red 95.8 0.009 3.1E-07 52.9 5.1 38 5-42 143-180 (404)
282 3gwf_A Cyclohexanone monooxyge 95.8 0.0075 2.6E-07 55.6 4.6 34 5-38 179-212 (540)
283 3lxd_A FAD-dependent pyridine 95.8 0.008 2.7E-07 53.4 4.7 39 4-42 152-190 (415)
284 1zej_A HBD-9, 3-hydroxyacyl-CO 95.8 0.0089 3E-07 50.3 4.5 33 4-37 12-44 (293)
285 1mo9_A ORF3; nucleotide bindin 95.7 0.02 6.8E-07 52.5 7.2 44 1-44 40-83 (523)
286 3c4n_A Uncharacterized protein 95.7 0.0047 1.6E-07 54.7 2.9 39 4-42 36-76 (405)
287 2gv8_A Monooxygenase; FMO, FAD 95.7 0.0089 3E-07 53.7 4.7 35 5-39 213-248 (447)
288 3ntd_A FAD-dependent pyridine 95.7 0.0086 2.9E-07 55.5 4.7 37 5-41 152-188 (565)
289 1lld_A L-lactate dehydrogenase 95.7 0.0092 3.2E-07 50.9 4.6 34 4-37 7-42 (319)
290 2raf_A Putative dinucleotide-b 95.7 0.011 3.7E-07 47.1 4.7 35 4-38 19-53 (209)
291 2ew2_A 2-dehydropantoate 2-red 95.7 0.0092 3.1E-07 50.7 4.4 33 5-37 4-36 (316)
292 1xdi_A RV3303C-LPDA; reductase 95.7 0.022 7.5E-07 51.9 7.2 40 4-44 2-44 (499)
293 3cty_A Thioredoxin reductase; 95.7 0.0095 3.2E-07 50.7 4.5 35 5-39 156-190 (319)
294 3urh_A Dihydrolipoyl dehydroge 95.7 0.0077 2.6E-07 54.8 4.2 37 5-41 199-235 (491)
295 3dk9_A Grase, GR, glutathione 95.7 0.0095 3.3E-07 54.0 4.7 36 5-40 188-223 (478)
296 1kyq_A Met8P, siroheme biosynt 95.7 0.0075 2.6E-07 50.0 3.6 34 4-37 13-46 (274)
297 3tl2_A Malate dehydrogenase; c 95.7 0.011 3.8E-07 50.2 4.8 34 3-36 7-41 (315)
298 3l8k_A Dihydrolipoyl dehydroge 95.7 0.0099 3.4E-07 53.7 4.7 38 5-42 173-210 (466)
299 3uox_A Otemo; baeyer-villiger 95.6 0.0087 3E-07 55.2 4.4 34 5-38 186-219 (545)
300 1fec_A Trypanothione reductase 95.6 0.019 6.7E-07 52.1 6.7 43 3-45 2-53 (490)
301 3k96_A Glycerol-3-phosphate de 95.6 0.011 3.9E-07 51.2 4.9 33 4-36 29-61 (356)
302 3dfz_A SIRC, precorrin-2 dehyd 95.6 0.013 4.3E-07 47.1 4.7 33 4-36 31-63 (223)
303 2wpf_A Trypanothione reductase 95.6 0.022 7.5E-07 51.8 6.9 44 1-44 4-56 (495)
304 3g17_A Similar to 2-dehydropan 95.6 0.0071 2.4E-07 51.0 3.3 33 5-37 3-35 (294)
305 3oc4_A Oxidoreductase, pyridin 95.6 0.011 3.8E-07 53.1 4.7 37 5-41 148-184 (452)
306 3itj_A Thioredoxin reductase 1 95.6 0.012 4.1E-07 50.3 4.8 37 5-41 174-210 (338)
307 3cky_A 2-hydroxymethyl glutara 95.5 0.011 3.9E-07 49.8 4.5 37 1-37 1-37 (301)
308 1zcj_A Peroxisomal bifunctiona 95.5 0.013 4.6E-07 52.7 5.0 33 5-37 38-70 (463)
309 3ab1_A Ferredoxin--NADP reduct 95.5 0.014 4.7E-07 50.6 5.0 37 5-41 164-200 (360)
310 2hjr_A Malate dehydrogenase; m 95.5 0.014 4.7E-07 50.1 4.8 33 5-37 15-48 (328)
311 2weu_A Tryptophan 5-halogenase 95.5 0.041 1.4E-06 50.2 8.2 34 5-38 3-39 (511)
312 4dna_A Probable glutathione re 95.4 0.023 8E-07 51.2 6.4 43 1-44 1-44 (463)
313 2q3e_A UDP-glucose 6-dehydroge 95.4 0.011 3.8E-07 53.4 4.2 36 1-36 2-39 (467)
314 3mog_A Probable 3-hydroxybutyr 95.4 0.013 4.4E-07 53.0 4.7 34 4-37 5-38 (483)
315 3k6j_A Protein F01G10.3, confi 95.4 0.015 5.1E-07 52.0 5.0 34 5-38 55-88 (460)
316 3o0h_A Glutathione reductase; 95.4 0.028 9.6E-07 50.9 6.9 41 4-45 26-66 (484)
317 3hwr_A 2-dehydropantoate 2-red 95.4 0.013 4.4E-07 50.1 4.4 33 4-37 19-51 (318)
318 3ego_A Probable 2-dehydropanto 95.4 0.014 4.7E-07 49.6 4.5 32 5-37 3-34 (307)
319 4ap3_A Steroid monooxygenase; 95.4 0.0095 3.3E-07 55.0 3.8 34 5-38 192-225 (549)
320 3s5w_A L-ornithine 5-monooxyge 95.4 0.0096 3.3E-07 53.6 3.8 35 4-38 227-263 (463)
321 3eag_A UDP-N-acetylmuramate:L- 95.4 0.015 5.2E-07 49.8 4.8 34 5-38 5-39 (326)
322 3doj_A AT3G25530, dehydrogenas 95.4 0.015 5.3E-07 49.4 4.8 33 5-37 22-54 (310)
323 2x8g_A Thioredoxin glutathione 95.4 0.011 3.9E-07 55.1 4.3 32 5-36 287-318 (598)
324 2v6b_A L-LDH, L-lactate dehydr 95.4 0.014 4.8E-07 49.4 4.5 32 6-37 2-35 (304)
325 1trb_A Thioredoxin reductase; 95.4 0.037 1.3E-06 46.9 7.1 43 1-44 2-44 (320)
326 1z82_A Glycerol-3-phosphate de 95.3 0.015 5.1E-07 50.0 4.6 33 4-36 14-46 (335)
327 1mv8_A GMD, GDP-mannose 6-dehy 95.3 0.013 4.5E-07 52.4 4.3 31 6-36 2-32 (436)
328 4dio_A NAD(P) transhydrogenase 95.3 0.017 5.7E-07 50.7 4.8 34 4-37 190-223 (405)
329 2ywl_A Thioredoxin reductase r 95.3 0.043 1.5E-06 42.2 6.8 56 232-290 56-111 (180)
330 4a7p_A UDP-glucose dehydrogena 95.3 0.016 5.5E-07 51.8 4.8 35 4-38 8-42 (446)
331 1y6j_A L-lactate dehydrogenase 95.3 0.017 5.7E-07 49.3 4.6 34 4-37 7-42 (318)
332 3ics_A Coenzyme A-disulfide re 95.3 0.015 5.2E-07 54.1 4.7 38 5-42 188-225 (588)
333 1hyu_A AHPF, alkyl hydroperoxi 95.3 0.012 4.1E-07 54.0 3.9 36 5-40 356-391 (521)
334 1evy_A Glycerol-3-phosphate de 95.2 0.012 4.1E-07 51.3 3.7 31 6-36 17-47 (366)
335 2izz_A Pyrroline-5-carboxylate 95.2 0.016 5.6E-07 49.5 4.5 37 1-37 19-59 (322)
336 2uyy_A N-PAC protein; long-cha 95.2 0.019 6.5E-07 48.9 4.8 34 4-37 30-63 (316)
337 3oj0_A Glutr, glutamyl-tRNA re 95.2 0.016 5.6E-07 43.0 3.8 33 4-36 21-53 (144)
338 2qyt_A 2-dehydropantoate 2-red 95.2 0.011 3.8E-07 50.3 3.2 35 1-35 4-45 (317)
339 3g0o_A 3-hydroxyisobutyrate de 95.1 0.019 6.6E-07 48.5 4.5 34 4-37 7-40 (303)
340 3pqe_A L-LDH, L-lactate dehydr 95.1 0.018 6E-07 49.2 4.2 36 1-36 1-39 (326)
341 3gvi_A Malate dehydrogenase; N 95.1 0.023 7.7E-07 48.5 4.8 34 4-37 7-41 (324)
342 1txg_A Glycerol-3-phosphate de 95.1 0.015 5.2E-07 49.9 3.8 30 6-35 2-31 (335)
343 3pid_A UDP-glucose 6-dehydroge 95.1 0.02 7E-07 50.7 4.6 33 4-37 36-68 (432)
344 1guz_A Malate dehydrogenase; o 95.0 0.022 7.4E-07 48.4 4.6 33 5-37 1-35 (310)
345 1dlj_A UDP-glucose dehydrogena 95.0 0.019 6.4E-07 50.8 4.4 31 6-37 2-32 (402)
346 3qfa_A Thioredoxin reductase 1 95.0 0.023 7.8E-07 52.1 5.0 32 5-36 211-242 (519)
347 3dgz_A Thioredoxin reductase 2 95.0 0.023 7.8E-07 51.6 5.0 33 5-37 186-218 (488)
348 2vdc_G Glutamate synthase [NAD 95.0 0.021 7.2E-07 51.4 4.7 35 5-39 265-300 (456)
349 3pef_A 6-phosphogluconate dehy 95.0 0.021 7.1E-07 47.9 4.4 33 5-37 2-34 (287)
350 2a9f_A Putative malic enzyme ( 95.0 0.018 6.2E-07 49.9 4.0 34 4-37 188-222 (398)
351 1zk7_A HGII, reductase, mercur 95.0 0.051 1.7E-06 49.0 7.2 43 1-44 1-43 (467)
352 4dll_A 2-hydroxy-3-oxopropiona 95.0 0.023 8E-07 48.5 4.7 33 5-37 32-64 (320)
353 4huj_A Uncharacterized protein 95.0 0.011 3.9E-07 47.4 2.6 34 4-37 23-57 (220)
354 3p2y_A Alanine dehydrogenase/p 95.0 0.018 6.2E-07 50.0 3.9 34 4-37 184-217 (381)
355 1m6i_A Programmed cell death p 95.0 0.044 1.5E-06 49.8 6.7 40 1-40 8-49 (493)
356 3r9u_A Thioredoxin reductase; 95.0 0.023 7.7E-07 48.0 4.6 35 5-39 148-182 (315)
357 3dtt_A NADP oxidoreductase; st 95.0 0.024 8.1E-07 46.4 4.5 34 4-37 19-52 (245)
358 3f8d_A Thioredoxin reductase ( 94.9 0.022 7.5E-07 48.2 4.4 37 5-41 155-191 (323)
359 3iwa_A FAD-dependent pyridine 94.9 0.019 6.6E-07 51.8 4.2 38 4-41 159-197 (472)
360 3l6d_A Putative oxidoreductase 94.9 0.029 9.8E-07 47.6 5.0 34 4-37 9-42 (306)
361 3fbs_A Oxidoreductase; structu 94.9 0.025 8.4E-07 47.3 4.5 33 5-38 142-174 (297)
362 3l9w_A Glutathione-regulated p 94.9 0.024 8E-07 50.2 4.5 35 3-37 3-37 (413)
363 3lzw_A Ferredoxin--NADP reduct 94.8 0.03 1E-06 47.7 4.9 37 5-41 155-191 (332)
364 2vns_A Metalloreductase steap3 94.8 0.028 9.7E-07 44.9 4.4 33 4-36 28-60 (215)
365 3dfu_A Uncharacterized protein 94.8 0.012 4.2E-07 47.4 2.2 33 4-36 6-38 (232)
366 3p7m_A Malate dehydrogenase; p 94.7 0.033 1.1E-06 47.5 4.9 35 3-37 4-39 (321)
367 1vl6_A Malate oxidoreductase; 94.7 0.023 8E-07 49.2 4.0 33 4-36 192-225 (388)
368 1ur5_A Malate dehydrogenase; o 94.7 0.03 1E-06 47.5 4.7 33 5-37 3-36 (309)
369 1ez4_A Lactate dehydrogenase; 94.7 0.025 8.4E-07 48.2 4.1 36 1-36 2-39 (318)
370 3d0o_A L-LDH 1, L-lactate dehy 94.7 0.026 8.9E-07 48.1 4.3 34 3-36 5-40 (317)
371 3pdu_A 3-hydroxyisobutyrate de 94.7 0.022 7.4E-07 47.8 3.7 33 6-38 3-35 (287)
372 1jay_A Coenzyme F420H2:NADP+ o 94.7 0.031 1E-06 44.4 4.5 31 6-36 2-33 (212)
373 2aef_A Calcium-gated potassium 94.6 0.019 6.4E-07 46.6 3.1 33 4-37 9-41 (234)
374 3c7a_A Octopine dehydrogenase; 94.6 0.024 8.1E-07 50.1 3.9 30 5-34 3-33 (404)
375 1a5z_A L-lactate dehydrogenase 94.5 0.026 9E-07 48.1 3.9 31 6-36 2-34 (319)
376 3vtf_A UDP-glucose 6-dehydroge 94.5 0.031 1.1E-06 49.7 4.2 32 5-36 22-53 (444)
377 3qsg_A NAD-binding phosphogluc 94.4 0.028 9.7E-07 47.7 3.9 33 4-36 24-57 (312)
378 1x0v_A GPD-C, GPDH-C, glycerol 94.4 0.02 6.9E-07 49.5 2.9 35 4-38 8-49 (354)
379 2h78_A Hibadh, 3-hydroxyisobut 94.4 0.035 1.2E-06 46.8 4.3 33 5-37 4-36 (302)
380 2pyx_A Tryptophan halogenase; 94.4 0.12 4.1E-06 47.3 8.2 36 3-38 6-53 (526)
381 1vpd_A Tartronate semialdehyde 94.4 0.036 1.2E-06 46.7 4.3 33 5-37 6-38 (299)
382 2rcy_A Pyrroline carboxylate r 94.3 0.038 1.3E-06 45.5 4.3 35 4-38 4-42 (262)
383 1oju_A MDH, malate dehydrogena 94.3 0.032 1.1E-06 46.9 3.9 33 5-37 1-35 (294)
384 2zyd_A 6-phosphogluconate dehy 94.3 0.039 1.3E-06 49.9 4.6 34 3-36 14-47 (480)
385 4a9w_A Monooxygenase; baeyer-v 94.3 0.087 3E-06 45.1 6.7 55 232-287 76-130 (357)
386 2wtb_A MFP2, fatty acid multif 94.3 0.035 1.2E-06 52.9 4.4 33 5-37 313-345 (725)
387 1hyh_A L-hicdh, L-2-hydroxyiso 94.3 0.033 1.1E-06 47.2 3.9 32 6-37 3-36 (309)
388 1cjc_A Protein (adrenodoxin re 94.3 0.038 1.3E-06 49.7 4.5 35 5-39 146-201 (460)
389 2o3j_A UDP-glucose 6-dehydroge 94.3 0.033 1.1E-06 50.4 4.1 32 5-36 10-43 (481)
390 1yqg_A Pyrroline-5-carboxylate 94.2 0.037 1.3E-06 45.6 3.9 31 6-36 2-33 (263)
391 4gwg_A 6-phosphogluconate dehy 94.1 0.048 1.7E-06 49.2 4.8 35 3-37 3-37 (484)
392 3ojo_A CAP5O; rossmann fold, c 94.1 0.04 1.4E-06 48.9 4.2 33 5-37 12-44 (431)
393 4ezb_A Uncharacterized conserv 94.1 0.043 1.5E-06 46.8 4.3 33 5-37 25-58 (317)
394 2f1k_A Prephenate dehydrogenas 94.1 0.047 1.6E-06 45.5 4.4 32 6-37 2-33 (279)
395 3dhn_A NAD-dependent epimerase 94.1 0.042 1.4E-06 44.0 4.0 37 1-37 1-38 (227)
396 1o94_A Tmadh, trimethylamine d 94.0 0.04 1.4E-06 52.7 4.3 36 5-41 529-566 (729)
397 1hdo_A Biliverdin IX beta redu 94.0 0.058 2E-06 42.3 4.7 33 5-37 4-37 (206)
398 3c24_A Putative oxidoreductase 94.0 0.06 2.1E-06 45.0 4.9 33 5-37 12-45 (286)
399 3nep_X Malate dehydrogenase; h 94.0 0.044 1.5E-06 46.5 4.0 33 5-37 1-35 (314)
400 2gf2_A Hibadh, 3-hydroxyisobut 94.0 0.051 1.7E-06 45.7 4.4 32 6-37 2-33 (296)
401 1nyt_A Shikimate 5-dehydrogena 94.0 0.057 2E-06 44.8 4.7 33 4-36 119-151 (271)
402 3ggo_A Prephenate dehydrogenas 93.9 0.06 2.1E-06 45.7 4.9 33 5-37 34-68 (314)
403 3gpi_A NAD-dependent epimerase 93.9 0.058 2E-06 45.0 4.7 34 4-37 3-36 (286)
404 1jw9_B Molybdopterin biosynthe 93.9 0.041 1.4E-06 45.1 3.6 34 4-37 31-65 (249)
405 2pv7_A T-protein [includes: ch 93.8 0.06 2E-06 45.4 4.6 33 5-37 22-55 (298)
406 2iz1_A 6-phosphogluconate dehy 93.8 0.058 2E-06 48.7 4.8 33 4-36 5-37 (474)
407 3ldh_A Lactate dehydrogenase; 93.8 0.054 1.9E-06 46.2 4.3 33 4-36 21-55 (330)
408 1x13_A NAD(P) transhydrogenase 93.8 0.059 2E-06 47.5 4.7 34 4-37 172-205 (401)
409 1pjc_A Protein (L-alanine dehy 93.8 0.053 1.8E-06 47.1 4.3 33 5-37 168-200 (361)
410 3lad_A Dihydrolipoamide dehydr 93.7 0.13 4.6E-06 46.3 7.1 42 2-43 1-42 (476)
411 2gag_A Heterotetrameric sarcos 93.7 0.035 1.2E-06 54.9 3.3 37 5-41 285-321 (965)
412 1pjq_A CYSG, siroheme synthase 93.7 0.057 2E-06 48.5 4.5 33 4-36 12-44 (457)
413 1l7d_A Nicotinamide nucleotide 93.7 0.066 2.2E-06 46.9 4.8 34 4-37 172-205 (384)
414 3phh_A Shikimate dehydrogenase 93.7 0.067 2.3E-06 44.2 4.5 33 5-37 119-151 (269)
415 1y7t_A Malate dehydrogenase; N 93.7 0.049 1.7E-06 46.6 3.9 36 1-36 1-44 (327)
416 3ius_A Uncharacterized conserv 93.7 0.061 2.1E-06 44.7 4.4 33 5-37 6-38 (286)
417 1yj8_A Glycerol-3-phosphate de 93.7 0.041 1.4E-06 48.0 3.4 34 5-38 22-62 (375)
418 2pgd_A 6-phosphogluconate dehy 93.7 0.062 2.1E-06 48.6 4.7 33 5-37 3-35 (482)
419 3tri_A Pyrroline-5-carboxylate 93.6 0.073 2.5E-06 44.4 4.8 34 4-37 3-39 (280)
420 4gbj_A 6-phosphogluconate dehy 93.6 0.055 1.9E-06 45.6 4.0 32 6-37 7-38 (297)
421 1wdk_A Fatty oxidation complex 93.6 0.045 1.5E-06 52.1 3.8 33 5-37 315-347 (715)
422 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.5 0.062 2.1E-06 48.6 4.5 32 5-36 2-33 (478)
423 2i6t_A Ubiquitin-conjugating e 93.5 0.057 1.9E-06 45.6 3.9 34 5-38 15-50 (303)
424 3ew7_A LMO0794 protein; Q8Y8U8 93.5 0.074 2.5E-06 42.2 4.5 32 6-37 2-34 (221)
425 3zwc_A Peroxisomal bifunctiona 93.5 0.059 2E-06 51.3 4.4 33 5-37 317-349 (742)
426 3ktd_A Prephenate dehydrogenas 93.5 0.078 2.7E-06 45.5 4.8 34 4-37 8-41 (341)
427 4ffl_A PYLC; amino acid, biosy 93.5 0.074 2.5E-06 46.1 4.7 33 6-38 3-35 (363)
428 3gt0_A Pyrroline-5-carboxylate 93.4 0.083 2.9E-06 43.1 4.7 33 5-37 3-39 (247)
429 4aj2_A L-lactate dehydrogenase 93.4 0.083 2.9E-06 45.1 4.8 33 4-36 19-53 (331)
430 4b4o_A Epimerase family protei 93.4 0.086 3E-06 44.2 4.9 35 5-39 1-36 (298)
431 1ldn_A L-lactate dehydrogenase 93.4 0.07 2.4E-06 45.4 4.4 33 4-36 6-40 (316)
432 2cvz_A Dehydrogenase, 3-hydrox 93.4 0.072 2.5E-06 44.5 4.4 31 6-37 3-33 (289)
433 1gte_A Dihydropyrimidine dehyd 93.4 0.062 2.1E-06 53.5 4.5 33 6-38 334-367 (1025)
434 2eez_A Alanine dehydrogenase; 93.4 0.076 2.6E-06 46.3 4.6 34 4-37 166-199 (369)
435 4hv4_A UDP-N-acetylmuramate--L 93.4 0.063 2.1E-06 48.8 4.2 33 5-37 23-56 (494)
436 3d1l_A Putative NADP oxidoredu 93.3 0.065 2.2E-06 44.2 3.9 34 4-37 10-44 (266)
437 2ahr_A Putative pyrroline carb 93.3 0.083 2.8E-06 43.4 4.6 33 5-37 4-36 (259)
438 1edz_A 5,10-methylenetetrahydr 93.3 0.084 2.9E-06 44.7 4.6 33 4-36 177-210 (320)
439 3fi9_A Malate dehydrogenase; s 93.3 0.087 3E-06 45.2 4.7 33 4-36 8-43 (343)
440 3h2s_A Putative NADH-flavin re 93.3 0.083 2.8E-06 42.1 4.4 31 6-36 2-33 (224)
441 1k0i_A P-hydroxybenzoate hydro 93.2 0.26 9E-06 43.0 8.0 57 232-289 103-163 (394)
442 2p4q_A 6-phosphogluconate dehy 93.2 0.08 2.7E-06 48.1 4.7 34 4-37 10-43 (497)
443 1p77_A Shikimate 5-dehydrogena 93.2 0.06 2E-06 44.7 3.6 33 4-36 119-151 (272)
444 3vku_A L-LDH, L-lactate dehydr 93.2 0.075 2.6E-06 45.3 4.2 33 4-36 9-43 (326)
445 2qrj_A Saccharopine dehydrogen 93.2 0.062 2.1E-06 46.8 3.7 39 4-42 214-257 (394)
446 1i36_A Conserved hypothetical 93.1 0.075 2.6E-06 43.8 4.0 30 6-35 2-31 (264)
447 3k30_A Histamine dehydrogenase 93.1 0.087 3E-06 50.0 5.0 38 5-42 524-563 (690)
448 2g5c_A Prephenate dehydrogenas 93.1 0.089 3E-06 43.8 4.5 32 6-37 3-36 (281)
449 2egg_A AROE, shikimate 5-dehyd 93.0 0.1 3.4E-06 44.0 4.7 33 4-36 141-174 (297)
450 1mld_A Malate dehydrogenase; o 93.0 0.091 3.1E-06 44.6 4.4 33 5-37 1-36 (314)
451 3dgh_A TRXR-1, thioredoxin red 93.0 0.15 5.1E-06 46.1 6.1 43 3-45 8-59 (483)
452 3h8l_A NADH oxidase; membrane 93.0 0.11 3.6E-06 45.9 5.1 37 6-42 3-42 (409)
453 3enk_A UDP-glucose 4-epimerase 92.9 0.12 4.2E-06 44.1 5.2 38 1-38 2-40 (341)
454 1yb4_A Tartronic semialdehyde 92.9 0.068 2.3E-06 44.8 3.4 32 5-37 4-35 (295)
455 1lqt_A FPRA; NADP+ derivative, 92.9 0.089 3E-06 47.3 4.4 35 5-39 148-203 (456)
456 3e8x_A Putative NAD-dependent 92.8 0.1 3.4E-06 42.1 4.3 34 4-37 21-55 (236)
457 3alj_A 2-methyl-3-hydroxypyrid 92.8 0.31 1.1E-05 42.3 7.8 53 232-289 107-160 (379)
458 2hk9_A Shikimate dehydrogenase 92.7 0.09 3.1E-06 43.7 3.9 33 4-36 129-161 (275)
459 1nvt_A Shikimate 5'-dehydrogen 92.6 0.12 4E-06 43.3 4.5 31 5-36 129-159 (287)
460 1b8p_A Protein (malate dehydro 92.6 0.085 2.9E-06 45.1 3.7 36 1-36 1-45 (329)
461 1qyd_A Pinoresinol-lariciresin 92.6 0.12 4.2E-06 43.5 4.7 37 1-37 1-38 (313)
462 1qyc_A Phenylcoumaran benzylic 92.5 0.13 4.5E-06 43.2 4.8 37 1-37 1-38 (308)
463 3vps_A TUNA, NAD-dependent epi 92.4 0.12 4.2E-06 43.6 4.5 35 4-38 7-42 (321)
464 2zqz_A L-LDH, L-lactate dehydr 92.4 0.11 3.9E-06 44.3 4.2 33 4-36 9-43 (326)
465 2vhw_A Alanine dehydrogenase; 92.4 0.13 4.3E-06 45.0 4.6 34 4-37 168-201 (377)
466 3ond_A Adenosylhomocysteinase; 92.3 0.14 5E-06 45.8 4.9 34 4-37 265-298 (488)
467 1np3_A Ketol-acid reductoisome 92.3 0.13 4.4E-06 44.2 4.6 33 5-37 17-49 (338)
468 3u62_A Shikimate dehydrogenase 92.3 0.14 4.7E-06 42.0 4.5 31 6-36 110-141 (253)
469 3don_A Shikimate dehydrogenase 92.3 0.11 3.8E-06 43.2 3.9 34 4-37 117-151 (277)
470 2x0j_A Malate dehydrogenase; o 92.2 0.11 3.9E-06 43.5 3.9 33 5-37 1-35 (294)
471 1y56_A Hypothetical protein PH 92.2 0.14 4.9E-06 46.4 4.9 50 240-291 265-315 (493)
472 1w4x_A Phenylacetone monooxyge 92.2 0.1 3.4E-06 48.0 3.9 33 5-37 187-219 (542)
473 3k5i_A Phosphoribosyl-aminoimi 92.1 0.15 5.3E-06 44.9 4.9 34 1-34 21-54 (403)
474 2f00_A UDP-N-acetylmuramate--L 92.1 0.13 4.6E-06 46.6 4.6 33 5-37 20-53 (491)
475 2d4a_B Malate dehydrogenase; a 92.1 0.12 4E-06 43.8 3.9 32 6-37 1-33 (308)
476 3cp8_A TRNA uridine 5-carboxym 92.1 0.3 1E-05 45.6 6.9 55 233-289 118-174 (641)
477 3b1f_A Putative prephenate deh 92.0 0.12 4.1E-06 43.2 3.9 33 4-36 6-40 (290)
478 1lnq_A MTHK channels, potassiu 92.0 0.11 3.6E-06 44.6 3.6 32 5-37 116-147 (336)
479 1smk_A Malate dehydrogenase, g 92.0 0.12 4.1E-06 44.2 3.9 34 4-37 8-44 (326)
480 3r6d_A NAD-dependent epimerase 91.9 0.18 6.1E-06 40.1 4.7 31 7-37 8-40 (221)
481 4b1b_A TRXR, thioredoxin reduc 91.8 0.3 1E-05 44.8 6.6 40 4-43 42-89 (542)
482 4gx0_A TRKA domain protein; me 91.8 0.14 5E-06 47.2 4.6 34 5-38 349-382 (565)
483 2rir_A Dipicolinate synthase, 91.8 0.17 5.8E-06 42.6 4.6 33 4-36 157-189 (300)
484 3fbt_A Chorismate mutase and s 91.7 0.18 6E-06 42.0 4.5 33 4-36 122-155 (282)
485 2d5c_A AROE, shikimate 5-dehyd 91.7 0.17 5.7E-06 41.7 4.4 31 6-36 118-148 (263)
486 2yjz_A Metalloreductase steap4 90.9 0.033 1.1E-06 44.0 0.0 34 4-37 19-52 (201)
487 3dqp_A Oxidoreductase YLBE; al 91.6 0.17 5.9E-06 40.1 4.3 32 6-37 2-34 (219)
488 3pwz_A Shikimate dehydrogenase 91.6 0.2 6.8E-06 41.5 4.7 33 4-36 120-153 (272)
489 3jyo_A Quinate/shikimate dehyd 91.6 0.2 6.8E-06 41.8 4.7 33 4-36 127-160 (283)
490 3tnl_A Shikimate dehydrogenase 91.5 0.19 6.6E-06 42.5 4.6 33 4-36 154-187 (315)
491 3o8q_A Shikimate 5-dehydrogena 91.5 0.2 6.9E-06 41.7 4.7 33 4-36 126-159 (281)
492 3d4o_A Dipicolinate synthase s 91.5 0.2 6.7E-06 42.1 4.6 33 4-36 155-187 (293)
493 1p3d_A UDP-N-acetylmuramate--a 91.5 0.14 4.8E-06 46.3 3.9 33 5-37 19-52 (475)
494 3ce6_A Adenosylhomocysteinase; 91.3 0.21 7.3E-06 45.0 4.9 34 4-37 274-307 (494)
495 4a26_A Putative C-1-tetrahydro 91.3 0.2 6.9E-06 41.8 4.4 32 4-35 165-197 (300)
496 3oz2_A Digeranylgeranylglycero 91.3 0.44 1.5E-05 41.3 6.9 54 233-287 103-160 (397)
497 1a4i_A Methylenetetrahydrofola 91.2 0.25 8.4E-06 41.3 4.8 32 4-35 165-197 (301)
498 1zud_1 Adenylyltransferase THI 91.1 0.21 7.2E-06 40.8 4.4 33 4-36 28-61 (251)
499 2wm3_A NMRA-like family domain 91.0 0.19 6.7E-06 42.0 4.2 37 1-37 2-40 (299)
500 3obb_A Probable 3-hydroxyisobu 91.0 0.23 7.8E-06 41.8 4.5 32 6-37 5-36 (300)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.2e-41 Score=304.65 Aligned_cols=291 Identities=53% Similarity=0.946 Sum_probs=254.1
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceE
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (328)
|++++||+|||+|++|+++|+.|+++|++|+|+|+++++||++++.+.++++.+|..+..+|..+|..++|.+|++|+++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 66789999999999999999999999999999999999999999999988888898776677889999999999999999
Q ss_pred ecCchHHHHHHhcCCCCeeEEEeeCceeEee---------CCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhccc
Q 020312 81 IANGALVRVLIHTDVTKYLYFKAVDGSFVYN---------KGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE 151 (328)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (328)
+..++++..+.+.++.++++|+..++.|.+. +|+.+++|.+..+.+.+.++++.+|..+.+|+.++.++..
T Consensus 97 ~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~~ 176 (475)
T 3p1w_A 97 LVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDA 176 (475)
T ss_dssp ETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCCT
T ss_pred ecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999988875 5678999988888899999999999999999999888754
Q ss_pred CCCcccccccCCCCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCCc
Q 020312 152 NDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGL 231 (328)
Q Consensus 152 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG~ 231 (328)
..+..+..++....++.+|++++++++.+++++..++++...+++...+....+.++..+..++.++ |.+++.+|+||+
T Consensus 177 ~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y-g~s~~~yp~gG~ 255 (475)
T 3p1w_A 177 NKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF-GKSPFIYPLYGL 255 (475)
T ss_dssp TCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCT
T ss_pred ccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc-CCCceEEECCCH
Confidence 4444444455678899999999999999988887777766655555557777888888888888888 778999999999
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC---cchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL---PNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~---~~~~ 292 (328)
+.++++|++.+++.|++|+++++|++|..++++++++|++ +|++++||+||+++++. |.++
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~~~~p~~~ 320 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYVMHLKNKI 320 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGCTTSTTSE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCccccCcccc
Confidence 9999999999999999999999999999933788999998 67789999999999988 7644
No 2
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=2.4e-35 Score=268.21 Aligned_cols=301 Identities=53% Similarity=0.968 Sum_probs=231.2
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCC----CCCCccCCCCCeEEecC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNE----QPPAHLGSSRDYNVDMI 76 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g 76 (328)
|+.++||||||||++||+||++|+++|++|+|||+++++||+++|.+.++.+..|.... ..+.+++....|..+++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~ 87 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLI 87 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccc
Confidence 45679999999999999999999999999999999999999999988765222221000 00011234456889999
Q ss_pred cceEecCchHHHHHHhcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCcc
Q 020312 77 PKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKT 156 (328)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (328)
|+++...+.+.+.+.+.++.+++++...+..+.+.+|+.+.+|.+..+.+.+.+.+++++..+.+|+..+.++....+..
T Consensus 88 P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (453)
T 2bcg_G 88 PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLST 167 (453)
T ss_dssp CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGG
T ss_pred cceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCchh
Confidence 99999988888888888888888888888888888999999996657888888888888778888888877654322222
Q ss_pred cccccCCCCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCCcCcHHH
Q 020312 157 HEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQ 236 (328)
Q Consensus 157 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG~~~l~~ 236 (328)
+..++....|+.+++++++.++.+++++...+.+...+.+...|....+.++..+..++..+ +..+|.+|+||++.+++
T Consensus 168 ~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~-~~~~~~~p~gG~~~l~~ 246 (453)
T 2bcg_G 168 HQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQ 246 (453)
T ss_dssp STTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCTTHHHH
T ss_pred hhccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhh-cCCceEeeCCCHHHHHH
Confidence 22223467899999999999999888776555444333444445555555555565555555 45678899999999999
Q ss_pred HHHHHHHHcCcEEEcCcceeEEEecC-CCcEEEEEecCceEEcCEEEECCCCCcchhhh---hccceeEE
Q 020312 237 AFARLSAVYGGTYMLNKPECKVEFDE-EGKVVGVTSEGETAKCKKVVCDPSYLPNKVII---IMLIGFIL 302 (328)
Q Consensus 237 ~l~~~~~~~G~~i~~~~~V~~I~~~~-~~~v~~v~~~g~~~~ad~vV~~~~~~~~~~~~---~~~~~~~~ 302 (328)
+|++.+++.|++|+++++|++|..+. ++++++|+++++++.||+||++++++++++++ ++.+++++
T Consensus 247 al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~l~~~~~~~~~~~~i 316 (453)
T 2bcg_G 247 GFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICI 316 (453)
T ss_dssp HHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGGGEEEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccchhhcccCCcceeEEEE
Confidence 99999999999999999999999762 46777888888899999999999999887754 35666666
No 3
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=1.8e-34 Score=260.85 Aligned_cols=300 Identities=62% Similarity=1.091 Sum_probs=231.7
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccc-hHHHHhhhcCCCCCCCccCCCCCeEEecCcce
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 79 (328)
|+.++||+|||||++||+||+.|+++|++|+|+|+++++||+++|.+ ....+..|..+..++..++...+|.+|+||++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~ 82 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKF 82 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCB
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcce
Confidence 67789999999999999999999999999999999999999999987 43211112111123344556678999999999
Q ss_pred EecCchHHHHHHhcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCccccc
Q 020312 80 IIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (328)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
+...+.+.+.+.+.++.+++++...++.+.+.+|+.+.+|.+..+.+.+.+.+++++..+.+++..+.++....+..+..
T Consensus 83 l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 162 (433)
T 1d5t_A 83 LMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEG 162 (433)
T ss_dssp EETTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTT
T ss_pred eeccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCchhccc
Confidence 99888888888888888888888877777778899999996645777888888887778888888877765433332222
Q ss_pred ccCCCCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCCcCcHHHHHH
Q 020312 160 MDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFA 239 (328)
Q Consensus 160 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG~~~l~~~l~ 239 (328)
.+....|+.+++++++.++.+++++...++++....+...|...++.++..+..++..+ |..++++|+||++.++++|+
T Consensus 163 ~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~-g~~~~~~p~gG~~~l~~~l~ 241 (433)
T 1d5t_A 163 VDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 241 (433)
T ss_dssp CCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS-SCCSEEEETTCTTHHHHHHH
T ss_pred cccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc-CCCcEEEeCcCHHHHHHHHH
Confidence 34567899999999999998888776555444434444445555555555665555444 55678899999999999999
Q ss_pred HHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcchhhh--hccceeEE
Q 020312 240 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVII--IMLIGFIL 302 (328)
Q Consensus 240 ~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~~~~~--~~~~~~~~ 302 (328)
+.+++.|++|+++++|++|..+ ++++++|++++++++||+||+++++.+.++++ ...+++++
T Consensus 242 ~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~~g~~~~ad~VV~a~~~~~~~~~~~~~~~~~~~i 305 (433)
T 1d5t_A 242 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVIRIICI 305 (433)
T ss_dssp HHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEETTEEEECSEEEECGGGCGGGEEEEEEEEEEEEE
T ss_pred HHHHHcCCEEECCCEEEEEEEe-CCEEEEEEECCeEEECCEEEECCCCCcccccccCcceeEEEE
Confidence 9999999999999999999988 88888888888899999999999988876644 34445543
No 4
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=7.1e-32 Score=249.35 Aligned_cols=285 Identities=31% Similarity=0.614 Sum_probs=233.6
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHh---hhcCC-------------------
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWK---RFRGN------------------- 58 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~---~~~~~------------------- 58 (328)
|+.+|||+|||+|+.|...|..|++.|++|+++|++++.||.+.+.++.++.. .++..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEE 84 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEE
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchh
Confidence 45679999999999999999999999999999999999999999999887765 33210
Q ss_pred -------------------------------------------C--------------------------C---------
Q 020312 59 -------------------------------------------E--------------------------Q--------- 60 (328)
Q Consensus 59 -------------------------------------------~--------------------------~--------- 60 (328)
. .
T Consensus 85 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (650)
T 1vg0_A 85 AIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCP 164 (650)
T ss_dssp EEEBCSSCCCEEEEEEEECSCC----------------------------------------------------------
T ss_pred hccccccccccccceeEeecccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 0
Q ss_pred -----------------------------------------CCCc--------cCCCCCeEEecCcceEecCchHHHHHH
Q 020312 61 -----------------------------------------PPAH--------LGSSRDYNVDMIPKFIIANGALVRVLI 91 (328)
Q Consensus 61 -----------------------------------------~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~ 91 (328)
.|.. ++..++|.+|++|+++++.+.++..|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL~PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 165 GPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLI 244 (650)
T ss_dssp ----------------------------------------------CCCHHHHHHTGGGCCEESSCCCEESSSHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEeeCCeeeeCCcHHHHHHH
Confidence 0000 235689999999999999999999999
Q ss_pred hcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCcccccccCCCCCHHHHH
Q 020312 92 HTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELI 171 (328)
Q Consensus 92 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 171 (328)
+.++.++++|+..+..|.+.+|+...+|.+..+.+.+.++++.+++.+.+|+.++.++.. .+..+. .++..++.+|+
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p~~~~--~~d~~S~~d~L 321 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HPDEYR--AYEGTTFSEYL 321 (650)
T ss_dssp HHTGGGGCCEEECCEEEEESSSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CHHHHH--TTTTSBHHHHH
T ss_pred HcCCcceeeEEEccceEEecCCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-ChHHHh--hhccCCHHHHH
Confidence 999999999999989899888889999998888899999999999999999998887553 221111 34678999999
Q ss_pred HhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCCcCcHHHHHHHHHHHcCcEEEc
Q 020312 172 AKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML 251 (328)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~ 251 (328)
+++++++.++.++...+++.... ..+....+.++..+..++.++ |..++.+|+||++.|+++|++.++..|+++++
T Consensus 322 ~~~~ls~~L~~~L~~~lal~~~~---~~pa~~~l~~i~~~l~sl~~y-g~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l 397 (650)
T 1vg0_A 322 KTQKLTPNLQYFVLHSIAMTSET---TSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCL 397 (650)
T ss_dssp TTSSSCHHHHHHHHHHTTC--CC---SCBHHHHHHHHHHHHHHTTSS-SSSSEEEETTCTTHHHHHHHHHHHHTTCEEES
T ss_pred HHhCCCHHHHHHHHHHHhccCCC---CCchhHHHHHHHHHHHHHHhh-ccCceEEeCCchhHHHHHHHHHHHHcCCEEEe
Confidence 99999999988877655544322 124555555667777777776 66789999999999999999999999999999
Q ss_pred CcceeEEEecCC--CcEEEEEe-cCceEEcCEEEECCCCCcchhh
Q 020312 252 NKPECKVEFDEE--GKVVGVTS-EGETAKCKKVVCDPSYLPNKVI 293 (328)
Q Consensus 252 ~~~V~~I~~~~~--~~v~~v~~-~g~~~~ad~vV~~~~~~~~~~~ 293 (328)
+++|++|..+ + |++++|++ +|+++.||+||+++.++|....
T Consensus 398 ~~~V~~I~~~-~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~~~ 441 (650)
T 1vg0_A 398 RHSVQCLVVD-KESRKCKAVIDQFGQRIISKHFIIEDSYLSENTC 441 (650)
T ss_dssp SCCEEEEEEE-TTTCCEEEEEETTSCEEECSEEEEEGGGBCTTTT
T ss_pred CCEeeEEEEe-CCCCeEEEEEeCCCCEEEcCEEEEChhhcCHhHh
Confidence 9999999988 5 88999886 6899999999998888776554
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.97 E-value=8.6e-31 Score=241.82 Aligned_cols=276 Identities=18% Similarity=0.239 Sum_probs=166.9
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecCch
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGA 85 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 85 (328)
+|||||||++||+||++|+++|++|+|||+++++||+++|++. .+|.+|.|++++.....
T Consensus 3 ~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~--------------------~G~~~D~G~~~~~~~~~ 62 (501)
T 4dgk_A 3 PTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYED--------------------QGFTFDAGPTVITDPSA 62 (501)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEE--------------------TTEEEECSCCCBSCTHH
T ss_pred CEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEe--------------------CCEEEecCceeecCchh
Confidence 7999999999999999999999999999999999999999865 46999999999876543
Q ss_pred HHHHHHhc--CCCCeeEEEeeCceeEe--eCCeEEEcCCCchhhhcCCCCChh--hHHHHHHHHHHHhhcccC-CCcccc
Q 020312 86 LVRVLIHT--DVTKYLYFKAVDGSFVY--NKGKVHKVPATDMEALKSPLMGIF--EKRRARKFFIYVQDYDEN-DPKTHE 158 (328)
Q Consensus 86 ~~~~~~~~--~~~~~l~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (328)
..+.+... .+.+++++...++.+.+ .+|..+.++.. .+.+.+.+..++ +...+.+|.+.++..... ......
T Consensus 63 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (501)
T 4dgk_A 63 IEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDND-QTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGT 141 (501)
T ss_dssp HHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSC-HHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CC
T ss_pred HHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeecc-HHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccc
Confidence 33333322 34556667666665543 46777777743 444433222211 223345555555443211 100000
Q ss_pred --------cc----cCC----CCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCC
Q 020312 159 --------GM----DLT----RVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGS 222 (328)
Q Consensus 159 --------~~----~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 222 (328)
.+ ... ..++.+++.++.-++.++.++.....+...... ..+....+ . ..+. ...
T Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~-~~~~~~~~---~---~~~~---~~~ 211 (501)
T 4dgk_A 142 VPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPF-ATSSIYTL---I---HALE---REW 211 (501)
T ss_dssp CCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC---CCCTHHH---H---HHHH---SCC
T ss_pred cccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcc-hhhhhhhh---h---hhhh---ccC
Confidence 00 000 123445555554444444443211111111111 11111110 0 0011 233
Q ss_pred eEEeecCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC-------cc----
Q 020312 223 PYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL-------PN---- 290 (328)
Q Consensus 223 ~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~-------~~---- 290 (328)
..++|+||++.|+++|++.++++|++|++|++|++|+.+ ++++++|++ +|+++.||.||+++++. ++
T Consensus 212 G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~ 290 (501)
T 4dgk_A 212 GVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA 290 (501)
T ss_dssp CEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC---------------
T ss_pred CeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc
Confidence 467899999999999999999999999999999999999 999999998 88999999999988762 11
Q ss_pred -----hhhh--hccceeEEeeeehhhhHHH
Q 020312 291 -----KVII--IMLIGFILIFLVRRILRFF 313 (328)
Q Consensus 291 -----~~~~--~~~~~~~~~~~~~~~~~~~ 313 (328)
++.+ .+.+.++++++++.....+
T Consensus 291 ~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l 320 (501)
T 4dgk_A 291 VKQSNKLQTKRMSNSLFVLYFGLNHHHDQL 320 (501)
T ss_dssp ------------CCEEEEEEEEESSCCTTS
T ss_pred hhhhhhhhccccCCceeEEEecccCCcccc
Confidence 1222 6889999999999886544
No 6
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.93 E-value=2.2e-24 Score=194.88 Aligned_cols=259 Identities=16% Similarity=0.180 Sum_probs=163.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecC-
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN- 83 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~- 83 (328)
+||+|||||++||+||++|+++|++|+|||+++++||++.++.. .++.+|.|+.++...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~--------------------~G~~~d~G~~~~~~~~ 60 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSY--------------------KGFQLSSGAFHMLPNG 60 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEE--------------------TTEEEESSSCSCBTTG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeecc--------------------CCcEEcCCCceEecCC
Confidence 58999999999999999999999999999999999999999764 468899998665432
Q ss_pred --chHHHHHHhcCCCCeeEEEeeCceeEeeC-----------CeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcc
Q 020312 84 --GALVRVLIHTDVTKYLYFKAVDGSFVYNK-----------GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYD 150 (328)
Q Consensus 84 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (328)
..+.+.+.+.+....+... +....... +..+.++. +. ...+..++. .+........
T Consensus 61 ~~~~~~~l~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~---~~~~~~~~~~ 129 (425)
T 3ka7_A 61 PGGPLACFLKEVEASVNIVRS--EMTTVRVPLKKGNPDYVKGFKDISFND-----FP-SLLSYKDRM---KIALLIVSTR 129 (425)
T ss_dssp GGSHHHHHHHHTTCCCCEEEC--CCCEEEEESSTTCCSSTTCEEEEEGGG-----GG-GGSCHHHHH---HHHHHHHHTT
T ss_pred CccHHHHHHHHhCCCceEEec--CCceEEeecCCCcccccccccceehhh-----hh-hhCCHHHHH---HHHHHHHhhh
Confidence 2344444455554332221 12122111 33333321 11 112222222 2222222111
Q ss_pred cCCCcccccccCCCCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCC
Q 020312 151 ENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYG 230 (328)
Q Consensus 151 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG 230 (328)
.. .....++.+|+++..-++..+.++.+........+....+....+..+..+ ... + ...+++||
T Consensus 130 ~~--------~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~----~~~-~--~~~~~~gG 194 (425)
T 3ka7_A 130 KN--------RPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM----YRF-G--GTGIPEGG 194 (425)
T ss_dssp TS--------CCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHH-C--SCEEETTS
T ss_pred hc--------CCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH----Hhc-C--CccccCCC
Confidence 00 114578999998875555455555443321111222122332222222221 111 2 23678999
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCC------Cc--------chh----
Q 020312 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY------LP--------NKV---- 292 (328)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~------~~--------~~~---- 292 (328)
++.++++|++.++++|++|+++++|++|..+ ++++++|++++++++||.||++++. ++ +..
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 273 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMV 273 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHh
Confidence 9999999999999999999999999999998 8888888888889999999998775 22 111
Q ss_pred hh-hccceeEEeeeehhhh
Q 020312 293 II-IMLIGFILIFLVRRIL 310 (328)
Q Consensus 293 ~~-~~~~~~~~~~~~~~~~ 310 (328)
.+ ...+.++++++++..+
T Consensus 274 ~~~~~~~~~~v~l~~~~~~ 292 (425)
T 3ka7_A 274 GTLQPSAGIKICLAADEPL 292 (425)
T ss_dssp HHCCCBEEEEEEEEESSCS
T ss_pred hCcCCCceEEEEeecCCCc
Confidence 12 3456788999998764
No 7
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.93 E-value=1.8e-24 Score=195.27 Aligned_cols=259 Identities=15% Similarity=0.182 Sum_probs=164.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecC-
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN- 83 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~- 83 (328)
+||+|||||++||+||++|+++|++|+|||+++++||++.+... .++.+|.|+.++...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~--------------------~g~~~d~G~~~~~~~~ 60 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPY--------------------KGFQLSTGALHMIPHG 60 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEE--------------------TTEEEESSSCSEETTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEecc--------------------CCEEEecCCeEEEccC
Confidence 48999999999999999999999999999999999999999864 468999998766532
Q ss_pred --chHHHHHHhcCCCCeeEEEeeCc-eeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCcccccc
Q 020312 84 --GALVRVLIHTDVTKYLYFKAVDG-SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGM 160 (328)
Q Consensus 84 --~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
..+.+.+.+.+.... +...++ ...+.+|..+.++.. ...+. ..++..+..+....... ..
T Consensus 61 ~~~~~~~l~~~lg~~~~--~~~~~~~~~~~~~g~~~~~~~~-~~~l~-----~~~~~~~~~~~~~~~~~---------~~ 123 (421)
T 3nrn_A 61 EDGPLAHLLRILGAKVE--IVNSNPKGKILWEGKIFHYRES-WKFLS-----VKEKAKALKLLAEIRMN---------KL 123 (421)
T ss_dssp TSSHHHHHHHHHTCCCC--EEECSSSCEEEETTEEEEGGGG-GGGCC-------------CCHHHHHTT---------CC
T ss_pred CChHHHHHHHHhCCcce--EEECCCCeEEEECCEEEEcCCc-hhhCC-----HhHHHHHHHHHHHHHhc---------cC
Confidence 234444444454322 333222 233347777776632 21111 11211222222222210 01
Q ss_pred cCCCCCHHHHHHhcCCChhH-HHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCCcCcHHHHHH
Q 020312 161 DLTRVTTRELIAKYGLDDNT-IDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFA 239 (328)
Q Consensus 161 ~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG~~~l~~~l~ 239 (328)
+.+..++.+++++.+++... ..++.+.............+....+..+.... .. + ...++++|++.++++|+
T Consensus 124 ~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~--g~~~~~gG~~~l~~~l~ 196 (421)
T 3nrn_A 124 PKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAAL----RW-G--GPGLIRGGCKAVIDELE 196 (421)
T ss_dssp CCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHH----HH-C--SCEEETTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHh----hc-C--CcceecCCHHHHHHHHH
Confidence 12347899999988555543 45554433221122222223332332322221 11 2 24688999999999999
Q ss_pred HHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCC-----------cchh----hh-hccceeEEe
Q 020312 240 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL-----------PNKV----II-IMLIGFILI 303 (328)
Q Consensus 240 ~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~-----------~~~~----~~-~~~~~~~~~ 303 (328)
+.++++|++|+++++|++|..+ ++++ |.+++++++||.||++++.. |+.. .+ ...+.++++
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~~-~~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~ 273 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINIE-EKKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFN 273 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEETT-TTEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEE
T ss_pred HHHHHCCCEEEcCCeEEEEEEE-CCEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999987 6776 66688899999999987752 1111 22 344889999
Q ss_pred eeehhhh
Q 020312 304 FLVRRIL 310 (328)
Q Consensus 304 ~~~~~~~ 310 (328)
++++...
T Consensus 274 l~~~~~~ 280 (421)
T 3nrn_A 274 LAVPGEP 280 (421)
T ss_dssp EEEESSC
T ss_pred EEEcCCc
Confidence 9998873
No 8
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.93 E-value=1.2e-25 Score=207.92 Aligned_cols=271 Identities=15% Similarity=0.107 Sum_probs=156.8
Q ss_pred cccEEEECCChhHHHHHHhhhhC-CCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEec
Q 020312 4 EYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~-G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (328)
++||||||||++||+||++|+++ |++|+|||+++++||+++|... ..+|.+|.|+|++..
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~-------------------~~G~~~D~G~h~~~~ 70 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVT-------------------PEGFLYDVGGHVIFS 70 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEEC-------------------TTSCEEESSCCCCCC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEe-------------------cCCEEEEeCceEecC
Confidence 58999999999999999999984 9999999999999999998632 146899999999987
Q ss_pred CchHHHHHH-hcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCccccccc
Q 020312 83 NGALVRVLI-HTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMD 161 (328)
Q Consensus 83 ~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
..+.+..++ +.......-.......+++.+|+.+..|... .+.. +...........+.......... .
T Consensus 71 ~~~~v~~l~~e~~~~~~~~~~~~~~~~i~~~g~~~~~p~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~ 139 (513)
T 4gde_A 71 HYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQN--NISM-LPKEEQVKCIDGMIDAALEARVA--------N 139 (513)
T ss_dssp CBHHHHHHHHHHSCSGGGEEEEECCEEEEETTEEEESSGGG--GGGG-SCHHHHHHHHHHHHHHHHHHHTC--------C
T ss_pred CCHHHHHHHHHhCCccceeEEecCceEEEECCeEeecchhh--hhhh-cchhhHHHHHHHHHHHHHhhhcc--------c
Confidence 665544444 3332221112223445677789988887421 1111 00000111111222211111100 1
Q ss_pred CCCCCHHHHHHhcCCChhH-HHHHhhhh-hccc-----------CCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEee-
Q 020312 162 LTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHR-----------DDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYP- 227 (328)
Q Consensus 162 ~~~~s~~~~~~~~~~~~~~-~~~~~~~~-~l~~-----------~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~- 227 (328)
....++.+|+.+. +.+.+ ..++.+.. .++. ...+............... .....+.....+.++
T Consensus 140 ~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 217 (513)
T 4gde_A 140 TKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILG-KTAGNWGPNATFRFPA 217 (513)
T ss_dssp SCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHT-CCCCSCBTTBEEEEES
T ss_pred ccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhc-ccccccccccceeecc
Confidence 1346778876554 22222 22222211 1111 0111111111111111100 001111012334444
Q ss_pred cCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCC------C-cchhh----h-h
Q 020312 228 LYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY------L-PNKVI----I-I 295 (328)
Q Consensus 228 ~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~------~-~~~~~----~-~ 295 (328)
+||+++++++|++.+++.|+++++|++|++|..+ ++.+ +..+|+++.||+||++++. + ++... . .
T Consensus 218 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~~v--~~~~G~~~~ad~vI~t~P~~~l~~~l~~~~~~~~~~~l~ 294 (513)
T 4gde_A 218 RGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NKTV--TLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLF 294 (513)
T ss_dssp SSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT-TTEE--EETTSCEEEEEEEEECSCHHHHHHHTTCHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc-CCEE--EEcCCCEEECCEEEECCCHHHHHHhcCchhhHhhhhccc
Confidence 7999999999999999999999999999999987 6553 2348899999999999875 1 12111 1 4
Q ss_pred ccceeEEeeeehhh
Q 020312 296 MLIGFILIFLVRRI 309 (328)
Q Consensus 296 ~~~~~~~~~~~~~~ 309 (328)
..+..+++++++..
T Consensus 295 y~~~~~v~l~~~~~ 308 (513)
T 4gde_A 295 YSSTHVIGVGVRGS 308 (513)
T ss_dssp EEEEEEEEEEEESS
T ss_pred CCceEEEEEEEecc
Confidence 56667777877654
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.93 E-value=1e-23 Score=195.22 Aligned_cols=278 Identities=18% Similarity=0.196 Sum_probs=166.0
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceE
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (328)
|+.++||+|||||++||+||++|+++|++|+|||+++++||++.|.+.+ .++.+|+|++++
T Consensus 1 m~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~-------------------~g~~~d~G~~~~ 61 (520)
T 1s3e_A 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQ-------------------KVKYVDLGGSYV 61 (520)
T ss_dssp --CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCT-------------------TTSCEESSCCEE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccC-------------------CCcccccCceEe
Confidence 6778999999999999999999999999999999999999999998641 257889999999
Q ss_pred ecCch-HHHHHHhcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccC----CCc
Q 020312 81 IANGA-LVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEN----DPK 155 (328)
Q Consensus 81 ~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 155 (328)
....+ +.+.+.+.++..... ........+.+|+.+..+.. +.. ...........++...+.+.... .+.
T Consensus 62 ~~~~~~~~~l~~~lgl~~~~~-~~~~~~~~~~~g~~~~~~~~----~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (520)
T 1s3e_A 62 GPTQNRILRLAKELGLETYKV-NEVERLIHHVKGKSYPFRGP----FPP-VWNPITYLDHNNFWRTMDDMGREIPSDAPW 135 (520)
T ss_dssp CTTCHHHHHHHHHTTCCEEEC-CCSSEEEEEETTEEEEECSS----SCC-CCSHHHHHHHHHHHHHHHHHHTTSCTTCGG
T ss_pred cCCcHHHHHHHHHcCCcceec-ccCCceEEEECCEEEEecCC----CCC-CCCHHHHHHHHHHHHHHHHHHhhcCcCCCc
Confidence 86543 444444555543221 11112223346665554421 110 01111112233333333322111 110
Q ss_pred cc-ccccCCCCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHH---HHhhhcccCCCeEEeecCCc
Q 020312 156 TH-EGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLY---AESIARFQGGSPYIYPLYGL 231 (328)
Q Consensus 156 ~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~g~~~~~~~~gG~ 231 (328)
.. .....+..++.+|+++.+.++..+.++.+........+....+....+..+... ...+... ....+.+++||+
T Consensus 136 ~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~gG~ 214 (520)
T 1s3e_A 136 KAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTT-NGGQERKFVGGS 214 (520)
T ss_dssp GSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCST-TSTTSEEETTCT
T ss_pred cccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccC-CCcceEEEeCCH
Confidence 00 001135689999999988888777766654321112222222332222111100 0001100 123457889999
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC-----------cchh----hh-
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL-----------PNKV----II- 294 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~-----------~~~~----~~- 294 (328)
+.++++|++. .|++|++|++|++|..+ ++++. |++ +|++++||+||+++++. |+.. .+
T Consensus 215 ~~l~~~l~~~---lg~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~ 289 (520)
T 1s3e_A 215 GQVSERIMDL---LGDRVKLERPVIYIDQT-RENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRV 289 (520)
T ss_dssp HHHHHHHHHH---HGGGEESSCCEEEEECS-SSSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSC
T ss_pred HHHHHHHHHH---cCCcEEcCCeeEEEEEC-CCeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhC
Confidence 9999999764 47899999999999987 66765 666 77899999999887651 2111 11
Q ss_pred hccceeEEeeeehhh
Q 020312 295 IMLIGFILIFLVRRI 309 (328)
Q Consensus 295 ~~~~~~~~~~~~~~~ 309 (328)
...+..++++.++..
T Consensus 290 ~~~~~~kv~l~~~~~ 304 (520)
T 1s3e_A 290 PLGSVIKCIVYYKEP 304 (520)
T ss_dssp CBCCEEEEEEECSSC
T ss_pred CCcceEEEEEEeCCC
Confidence 344566778887765
No 10
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.92 E-value=2.8e-24 Score=197.04 Aligned_cols=272 Identities=15% Similarity=0.129 Sum_probs=165.6
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC--eEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEec
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (328)
+||+|||||++||+||++|+++|+ +|+|||+++++||++++.... .++.+|.|++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~-------------------~g~~~d~G~~~~~~ 63 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP-------------------NGAIFELGPRGIRP 63 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT-------------------TSCEEESSCCCBCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc-------------------CCeEEEeCCCcccC
Confidence 599999999999999999999999 999999999999999987531 36889999998865
Q ss_pred Cc----hHHHHHHhcCCCCeeEEEee-----CceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCC
Q 020312 83 NG----ALVRVLIHTDVTKYLYFKAV-----DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEND 153 (328)
Q Consensus 83 ~~----~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (328)
.. .+.+.+.+.++...+..... ...+.+.+|..+.+|.. ...+...+..+ ..... ...+.+.....
T Consensus 64 ~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~-~~~~~~~~~~~-~~~~~---~~~~~~~~~~~ 138 (477)
T 3nks_A 64 AGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTG-LRGLLRPSPPF-SKPLF---WAGLRELTKPR 138 (477)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCS-SCC---CCTTS-CSCSS---HHHHTTTTSCC
T ss_pred CCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEECCEEEECCCC-hhhcccccchh-hhHHH---HHHHHhhhcCC
Confidence 42 23444555666554333221 12466678888888754 22221111111 10001 11122221110
Q ss_pred CcccccccCCCCCHHHHHHhcCCChhH-HHHHhhhhh-cccCCCCCCCchHHHHHHHHHHH---Hh-----hhc------
Q 020312 154 PKTHEGMDLTRVTTRELIAKYGLDDNT-IDFIGHALA-LHRDDRYLNEPALDTVKRMKLYA---ES-----IAR------ 217 (328)
Q Consensus 154 ~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~-l~~~~~~~~~~~~~~l~~~~~~~---~~-----~~~------ 217 (328)
...+..++.+|+++. +.... ..++.+... ++. .+....+....+..+.... .+ +..
T Consensus 139 ------~~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~-~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~ 210 (477)
T 3nks_A 139 ------GKEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFA-GNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ 210 (477)
T ss_dssp ------CCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHS-SCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----C
T ss_pred ------CCCCCcCHHHHHHHh-hCHHHHHHHHHHHhccccc-CCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccC
Confidence 012557899998874 33433 334444332 221 2222222222211111110 00 000
Q ss_pred ---------ccCCCeEEeecCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCC-
Q 020312 218 ---------FQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY- 287 (328)
Q Consensus 218 ---------~~g~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~- 287 (328)
......+++++||++.++++|++.+++.|++|+++++|++|..+ +++++.|+++++++.||+||++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~-~~~~~~v~~~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 211 PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ-AEGRWKVSLRDSSLEADHVISAIPAS 289 (477)
T ss_dssp CCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC-GGGCEEEECSSCEEEESEEEECSCHH
T ss_pred CchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCceEEEEECCeEEEcCEEEECCCHH
Confidence 00123578999999999999999999999999999999999987 5554567777778999999988765
Q ss_pred -----Cc---chh----hh-hccceeEEeeeehhh
Q 020312 288 -----LP---NKV----II-IMLIGFILIFLVRRI 309 (328)
Q Consensus 288 -----~~---~~~----~~-~~~~~~~~~~~~~~~ 309 (328)
++ +.+ .. ...+..+++++++..
T Consensus 290 ~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~ 324 (477)
T 3nks_A 290 VLSELLPAEAAPLARALSAITAVSVAVVNLQYQGA 324 (477)
T ss_dssp HHHHHSCGGGHHHHHHHHTCCEEEEEEEEEEETTC
T ss_pred HHHHhccccCHHHHHHHhcCCCCcEEEEEEEECCC
Confidence 12 111 11 445556777777664
No 11
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.92 E-value=3.1e-24 Score=197.70 Aligned_cols=275 Identities=17% Similarity=0.126 Sum_probs=166.6
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecCc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANG 84 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (328)
+||+|||||++||+||++|+++|++|+|||+++++||++.|.+. .++.+|+|++++....
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~--------------------~g~~~d~G~~~~~~~~ 99 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNI--------------------DGYPYEMGGTWVHWHQ 99 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEE--------------------TTEEEECSCCCBCTTS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceeccc--------------------CCeeecCCCeEecCcc
Confidence 89999999999999999999999999999999999999999864 4688999999987554
Q ss_pred -hHHHHHHhcCCCCeeEEEe----eCceeEeeC--CeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHh-hcccCCCcc
Q 020312 85 -ALVRVLIHTDVTKYLYFKA----VDGSFVYNK--GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQ-DYDENDPKT 156 (328)
Q Consensus 85 -~~~~~~~~~~~~~~l~~~~----~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 156 (328)
.+.+.+.+.++...+.... ....+.+.+ +....+|..+ ... .+. ..+..+.+... ......+..
T Consensus 100 ~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~----~~~-~~~~~~~~~~~~~~~~~~~~~ 171 (495)
T 2vvm_A 100 SHVWREITRYKMHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEA---EDE----LLR-SALHKFTNVDGTNGRTVLPFP 171 (495)
T ss_dssp HHHHHHHHHTTCTTCEEESCCCSSSCCEEEEESSTTCCEEECHHH---HHH----HHH-HHHHHHHCSSSSTTTTTCSCT
T ss_pred HHHHHHHHHcCCcceeecccccCCCceEEEecCCCCceeecCHHH---HHH----HHH-HHHHHHHccchhhhhhcCCCC
Confidence 4455555566654443332 112333333 4444444211 100 011 01112221000 000000000
Q ss_pred cc------cccCCCCCHHHHHHhcC--CChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeec
Q 020312 157 HE------GMDLTRVTTRELIAKYG--LDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPL 228 (328)
Q Consensus 157 ~~------~~~~~~~s~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 228 (328)
.. ....+..|+.+|+++.+ +++..+.++.+.+......+....+....+..+......+..+......++++
T Consensus 172 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (495)
T 2vvm_A 172 HDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFK 251 (495)
T ss_dssp TSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEET
T ss_pred CCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeC
Confidence 00 01234679999999887 77777666665543322223323343333322211100000000012346789
Q ss_pred CCcCcHHHHHHHHHHHcC-cEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC-----------cchhh--
Q 020312 229 YGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL-----------PNKVI-- 293 (328)
Q Consensus 229 gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~-----------~~~~~-- 293 (328)
||++.++++|++.+++.| ++|+++++|++|..+ ++.+ .|++ +|++++||+||+++++. |+...
T Consensus 252 gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~a 329 (495)
T 2vvm_A 252 DGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAA-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISA 329 (495)
T ss_dssp TCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSE-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHH
T ss_pred CCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEE-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHH
Confidence 999999999999999998 999999999999987 5664 4566 66789999999887651 21111
Q ss_pred --h-hccceeEEeeeehhh
Q 020312 294 --I-IMLIGFILIFLVRRI 309 (328)
Q Consensus 294 --~-~~~~~~~~~~~~~~~ 309 (328)
. ...+..++++.++..
T Consensus 330 i~~~~~~~~~kv~l~~~~~ 348 (495)
T 2vvm_A 330 MQAGHVSMCTKVHAEVDNK 348 (495)
T ss_dssp HHHCCCCCCEEEEEEESCG
T ss_pred HHhcCCCceeEEEEEECCc
Confidence 1 344666888887764
No 12
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.92 E-value=3.5e-23 Score=189.79 Aligned_cols=269 Identities=12% Similarity=0.070 Sum_probs=166.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (328)
++||+|||||++||+||++|+++|++|+|||+++++||++.|.+. .++.+|.|++++...
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~--------------------~g~~~~~g~~~~~~~ 75 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHAL--------------------AGYLVEQGPNSFLDR 75 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEE--------------------TTEEEESSCCCEETT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeecc--------------------CCeeeecChhhhhhh
Confidence 589999999999999999999999999999999999999999865 468899999999875
Q ss_pred chH-HHHHHhcCCCCeeEEEe--eCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCcccccc
Q 020312 84 GAL-VRVLIHTDVTKYLYFKA--VDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGM 160 (328)
Q Consensus 84 ~~~-~~~~~~~~~~~~l~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
++. .+.+.+.++...+.... ....+.+.+|+.+.+|....+.+...+..+.+ ..+ .+.+...... .
T Consensus 76 ~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~-----~ 144 (478)
T 2ivd_A 76 EPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGA---RLR---VAGELFSRRA-----P 144 (478)
T ss_dssp CHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHH---HHH---HHGGGGCCCC-----C
T ss_pred hHHHHHHHHHcCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHH---HHH---HhhhhhcCCC-----C
Confidence 544 44444566654443222 12345567888888885533333333333221 111 2222211110 0
Q ss_pred cCCCCCHHHHHHhcCCChhH-HHHHhhhhhcccCCCCCCCchHHHHHHHHHHHH-------hhh-c----------ccCC
Q 020312 161 DLTRVTTRELIAKYGLDDNT-IDFIGHALALHRDDRYLNEPALDTVKRMKLYAE-------SIA-R----------FQGG 221 (328)
Q Consensus 161 ~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-------~~~-~----------~~g~ 221 (328)
..+..++.+|+++. +.+.. ..++.+........+....+....+..+..+.. .+. . ....
T Consensus 145 ~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (478)
T 2ivd_A 145 EGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTA 223 (478)
T ss_dssp TTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCS
T ss_pred CCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCccccc
Confidence 23568999999876 44544 444444332211222212222222222111100 000 0 0012
Q ss_pred ----CeEEeecCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe----cCceEEcCEEEECCCCC-----
Q 020312 222 ----SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCDPSYL----- 288 (328)
Q Consensus 222 ----~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~----~g~~~~ad~vV~~~~~~----- 288 (328)
..+++++||++.++++|++.+ |++|+++++|++|..+ +++ +.|++ ++++++||+||++++..
T Consensus 224 ~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~-~~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~l 298 (478)
T 2ivd_A 224 PKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE-DGG-WRLIIEEHGRRAELSVAQVVLAAPAHATAKL 298 (478)
T ss_dssp CCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC---C-CEEEEEETTEEEEEECSEEEECSCHHHHHHH
T ss_pred ccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec-CCe-EEEEEeecCCCceEEcCEEEECCCHHHHHHH
Confidence 567899999999999998665 6899999999999987 555 44553 66789999999987651
Q ss_pred ----cchh----hh-hccceeEEeeeehhh
Q 020312 289 ----PNKV----II-IMLIGFILIFLVRRI 309 (328)
Q Consensus 289 ----~~~~----~~-~~~~~~~~~~~~~~~ 309 (328)
|+.. .. ...+.++++++++..
T Consensus 299 l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~ 328 (478)
T 2ivd_A 299 LRPLDDALAALVAGIAYAPIAVVHLGFDAG 328 (478)
T ss_dssp HTTTCHHHHHHHHTCCBCCEEEEEEEECTT
T ss_pred hhccCHHHHHHHhcCCCCcEEEEEEEEccc
Confidence 2211 11 345677888888764
No 13
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.89 E-value=5e-23 Score=188.32 Aligned_cols=272 Identities=11% Similarity=0.123 Sum_probs=155.9
Q ss_pred CCC-cccEEEECCChhHHHHHHhhhhCC------CeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEE
Q 020312 1 MDE-EYDVIVLGTGLKECILSGLLSVDG------LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV 73 (328)
Q Consensus 1 ~~~-~~dvvIvG~G~aGl~aA~~L~~~G------~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (328)
|.. .+||+|||||++||+||++|+++| ++|+|||+++++||++.|... .++.+
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~--------------------~g~~~ 60 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKK--------------------DGYII 60 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECC--------------------TTCCE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEecc--------------------CCEEe
Confidence 443 489999999999999999999999 999999999999999999854 46788
Q ss_pred ecCcceEecCc-hHHHHHHhcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhc--------CCCCChhhHHHHHHHHH
Q 020312 74 DMIPKFIIANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALK--------SPLMGIFEKRRARKFFI 144 (328)
Q Consensus 74 ~~g~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 144 (328)
|.|++++.... .+.+.+.+.++...+........+.+.++....+|......+. ..+.....+ .....+
T Consensus 61 d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~ 138 (470)
T 3i6d_A 61 ERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGK--ARAAMD 138 (470)
T ss_dssp ESSCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCS--HHHHHH
T ss_pred ccChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHH--HHHhcC
Confidence 99998887654 4455555667766554332344566667777776643211111 111111110 111111
Q ss_pred HHhhcccCCCcccccccCCCCCHHHHHHhcCCChhH-HHHHhhhh-hcccCCCCCCCchHHHHHHHH-------HHHHhh
Q 020312 145 YVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMK-------LYAESI 215 (328)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~-------~~~~~~ 215 (328)
..... ....+..++.+|+++. +.... ..++.+.. .++. .+....+....+..+. .....+
T Consensus 139 ~~~~~---------~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 207 (470)
T 3i6d_A 139 FILPA---------SKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYA-GDIDKLSLMSTFPQFYQTEQKHRSLILGM 207 (470)
T ss_dssp HHSCC---------CSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTC-SCTTTBBHHHHCGGGCC------------
T ss_pred cccCC---------CCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEec-CCHHHhhHHHHHHHHHHHHHhcCcHHHHH
Confidence 11100 0122568899999875 44443 34444433 2221 1111111111100000 000000
Q ss_pred hc-----------ccCCCeEEeecCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEE
Q 020312 216 AR-----------FQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVC 283 (328)
Q Consensus 216 ~~-----------~~g~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~ 283 (328)
.. ......++++++|++.++++|++.+.+ ++|+++++|++|..+ ++.+ .|++ +|++++||+||+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~~-~v~~~~g~~~~ad~vi~ 283 (470)
T 3i6d_A 208 KKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS-GSCY-SLELDNGVTLDADSVIV 283 (470)
T ss_dssp -------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC-SSSE-EEEESSSCEEEESEEEE
T ss_pred HhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc-CCeE-EEEECCCCEEECCEEEE
Confidence 00 000236788899999999999866543 799999999999988 6664 4666 777899999998
Q ss_pred CCCCC-------cchh----hh-hccceeEEeeeehhh
Q 020312 284 DPSYL-------PNKV----II-IMLIGFILIFLVRRI 309 (328)
Q Consensus 284 ~~~~~-------~~~~----~~-~~~~~~~~~~~~~~~ 309 (328)
+++.. ++++ .. ...+..++++.++..
T Consensus 284 a~p~~~~~~l~~~~~~~~~~~~~~~~~~~~v~l~~~~~ 321 (470)
T 3i6d_A 284 TAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEG 321 (470)
T ss_dssp CSCHHHHHHHTTTSTTHHHHHTCEEEEEEEEEEEESST
T ss_pred CCCHHHHHHHcCCchhhHHHhcCCCCceEEEEEEECch
Confidence 87641 1111 12 345566677776654
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.89 E-value=6e-22 Score=181.46 Aligned_cols=272 Identities=12% Similarity=0.164 Sum_probs=165.4
Q ss_pred CcccEEEECCChhHHHHHHhhhhCC--CeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceE
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G--~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (328)
..+||+|||||++||+||++|+++| ++|+|||+++++||++.+.+. .++.+|.|++++
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~--------------------~g~~~~~g~~~~ 62 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYRE--------------------DGFTIERGPDSY 62 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECS--------------------TTCCEESSCCCE
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEee--------------------CCEEEecCchhh
Confidence 3689999999999999999999999 999999999999999998854 467889999888
Q ss_pred ecCc-hHHHHHHhcCCCCeeEEEeeCceeEeeCCeEEEcCCCc--------hhhhcCCCCChhhHHHHHHHHHHHhhccc
Q 020312 81 IANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATD--------MEALKSPLMGIFEKRRARKFFIYVQDYDE 151 (328)
Q Consensus 81 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (328)
.... .+.+.+.+.++...+........+.+.++....+|... ...+...+.....+. .+.........
T Consensus 63 ~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 139 (475)
T 3lov_A 63 VARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQ---EVADLLLHPSD 139 (475)
T ss_dssp ETTSTHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHH---HHHHHHHSCCT
T ss_pred hcccHHHHHHHHHcCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHH---HhhCcccCCcc
Confidence 7654 44555556677665543324445667788888776432 222233444433221 22222221111
Q ss_pred CCCcccccccCCCCCHHHHHHhcCCChhH-HHHHhhhh-hcccCCCCCCCchHHHHHHHHHH-------HHhhhccc---
Q 020312 152 NDPKTHEGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLY-------AESIARFQ--- 219 (328)
Q Consensus 152 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~--- 219 (328)
. .....+..++.+|+++. +.... ..++.+.. ..+. .+....+....+..+..+ ...+....
T Consensus 140 ~-----~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 212 (475)
T 3lov_A 140 S-----LRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYA-GNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLD 212 (475)
T ss_dssp T-----CCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGC-CCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--
T ss_pred c-----ccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeec-CChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccc
Confidence 0 00022568899999875 33443 44444433 2222 111111111111111100 00100000
Q ss_pred -----------CCCeEEeecCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCC
Q 020312 220 -----------GGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (328)
Q Consensus 220 -----------g~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~ 287 (328)
....++++++|++.++++|++.+.+ ++|+++++|++|..+ ++.+ .|++ +| +++||+||++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~~-~v~~~~g-~~~ad~vV~a~p~ 287 (475)
T 3lov_A 213 QLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE-DGRY-RLKTDHG-PEYADYVLLTIPH 287 (475)
T ss_dssp ------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE-TTEE-EEECTTC-CEEESEEEECSCH
T ss_pred cccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe-CCEE-EEEECCC-eEECCEEEECCCH
Confidence 1356788999999999999876543 799999999999987 6654 4676 55 8999999988764
Q ss_pred C------cc----hhhh-hccceeEEeeeehhh
Q 020312 288 L------PN----KVII-IMLIGFILIFLVRRI 309 (328)
Q Consensus 288 ~------~~----~~~~-~~~~~~~~~~~~~~~ 309 (328)
. +. .+.. ...+..++++.++..
T Consensus 288 ~~~~~ll~~~~~~~~~~~~~~~~~~v~l~~~~~ 320 (475)
T 3lov_A 288 PQVVQLLPDAHLPELEQLTTHSTATVTMIFDQQ 320 (475)
T ss_dssp HHHHHHCTTSCCHHHHTCCEEEEEEEEEEEECC
T ss_pred HHHHHHcCccCHHHHhcCCCCeEEEEEEEECCc
Confidence 1 11 1112 344556677776654
No 15
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.89 E-value=7.2e-22 Score=179.84 Aligned_cols=254 Identities=17% Similarity=0.215 Sum_probs=148.2
Q ss_pred CC-CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcce
Q 020312 1 MD-EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (328)
Q Consensus 1 ~~-~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 79 (328)
|+ .++||+|||||++||+||++|+++|++|+|||+++++||++.+... .++.+|.|+++
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~--------------------~g~~~~~g~~~ 60 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI--------------------DGAVLEIGGQW 60 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE--------------------TTEEEECSCCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc--------------------CCceeccCCeE
Confidence 44 4689999999999999999999999999999999999999988754 35788999998
Q ss_pred EecCc-hHHHHHHhcCCCCeeEEEeeCceeEe-eC-CeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhh----cccC
Q 020312 80 IIANG-ALVRVLIHTDVTKYLYFKAVDGSFVY-NK-GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQD----YDEN 152 (328)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 152 (328)
+.... .+.+.+.+.++...... ......+ .+ |..+.+... +. . ........+..+...+.. ....
T Consensus 61 ~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~g~~~~~~~~----~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (453)
T 2yg5_A 61 VSPDQTALISLLDELGLKTFERY--REGESVYISSAGERTRYTGD----SF-P-TNETTKKEMDRLIDEMDDLAAQIGAE 132 (453)
T ss_dssp BCTTCHHHHHHHHHTTCCEEECC--CCSEEEEECTTSCEEEECSS----SC-S-CCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ecCccHHHHHHHHHcCCcccccc--cCCCEEEEeCCCceeeccCC----CC-C-CChhhHHHHHHHHHHHHHHHhhcCCC
Confidence 86554 34444545555432211 1222222 22 444433211 00 0 000011111111111111 1111
Q ss_pred CCcccc-cccCCCCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCC-CCchHHHHHHHHHHHHhhhccc--CCCeEEeec
Q 020312 153 DPKTHE-GMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYL-NEPALDTVKRMKLYAESIARFQ--GGSPYIYPL 228 (328)
Q Consensus 153 ~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~--g~~~~~~~~ 228 (328)
.+.... ....+..++.+|+++.+.++.++.++.+........+.. ..+....+..+... ..+.... ....+++++
T Consensus 133 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~ 211 (453)
T 2yg5_A 133 EPWAHPLARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASA-GSFSHLVDEDFILDKRVI 211 (453)
T ss_dssp CGGGSTTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHT-TCHHHHHCHHHHTCEEET
T ss_pred CCCCCcchhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccC-CcHhhhccCCCcceEEEc
Confidence 000000 012356899999999988887777766544221111111 22332222211110 0000000 012357889
Q ss_pred CCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCC
Q 020312 229 YGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (328)
Q Consensus 229 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~ 287 (328)
||++.++++|++. .|++|++|++|++|..+ ++..+.|++++++++||+||++++.
T Consensus 212 gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~-~~~~v~v~~~~~~~~ad~VI~a~p~ 266 (453)
T 2yg5_A 212 GGMQQVSIRMAEA---LGDDVFLNAPVRTVKWN-ESGATVLADGDIRVEASRVILAVPP 266 (453)
T ss_dssp TCTHHHHHHHHHH---HGGGEECSCCEEEEEEE-TTEEEEEETTTEEEEEEEEEECSCG
T ss_pred CChHHHHHHHHHh---cCCcEEcCCceEEEEEe-CCceEEEEECCeEEEcCEEEEcCCH
Confidence 9999999999754 47899999999999987 6552446678889999999988765
No 16
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.88 E-value=1.9e-21 Score=179.40 Aligned_cols=277 Identities=11% Similarity=0.079 Sum_probs=160.2
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceE
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (328)
|.+.+||+|||||++||+||++|+++|++|+|+|+++++||++.+.+. .++.+|.|++++
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~--------------------~g~~~~~g~~~~ 69 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQ--------------------DGLIWDEGANTM 69 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEE--------------------TTEEEESSCCCB
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecc--------------------CCeEEecCCccc
Confidence 445689999999999999999999999999999999999999999864 468899999998
Q ss_pred ecCch-HHHHHHhcCCCCeeEEEee-CceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCcccc
Q 020312 81 IANGA-LVRVLIHTDVTKYLYFKAV-DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHE 158 (328)
Q Consensus 81 ~~~~~-~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
....+ +.+.+.+.++...+.+... ...+.+.+|..+.+|.+....+...+.....+ +..+......... ... .
T Consensus 70 ~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~--~ 144 (504)
T 1sez_A 70 TESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSK--LQMLLEPILWKNK-KLS--Q 144 (504)
T ss_dssp CCCSHHHHHHHHHTTCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHH--HHHHTHHHHC----------
T ss_pred ccCcHHHHHHHHHcCCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHH--HHHhHhhhccCcc-ccc--c
Confidence 76544 4445556676655444322 22345567888888754222233333333221 1111111110000 000 0
Q ss_pred cccCCCCCHHHHHHhcCCChhH-HHHHhhhhh-cccCCCCCCCchHHHHHHHHHH-----------H-Hhhhccc-----
Q 020312 159 GMDLTRVTTRELIAKYGLDDNT-IDFIGHALA-LHRDDRYLNEPALDTVKRMKLY-----------A-ESIARFQ----- 219 (328)
Q Consensus 159 ~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~-l~~~~~~~~~~~~~~l~~~~~~-----------~-~~~~~~~----- 219 (328)
......|+.+|+++. +.+.. ..++.+... .+.. +....+....+..+... . ..+....
T Consensus 145 -~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (504)
T 1sez_A 145 -VSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGG-DPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQG 221 (504)
T ss_dssp ----CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSC-CGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC--------
T ss_pred -cCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCC-ChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccccccccc
Confidence 012458999999876 44443 444444332 2221 11111221111111110 0 0011000
Q ss_pred ---------CCCeEEeecCCcCcHHHHHHHHHHHcC-cEEEcCcceeEEEecCCCc-----EEEEEe---cC---ceEEc
Q 020312 220 ---------GGSPYIYPLYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGK-----VVGVTS---EG---ETAKC 278 (328)
Q Consensus 220 ---------g~~~~~~~~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~~~-----v~~v~~---~g---~~~~a 278 (328)
....+++++||++.|+++|++ ..| ++|++|++|++|..+ +++ .+.|++ +| ++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~-~~~~~~~~~~~v~~~~~~g~~~~~~~a 297 (504)
T 1sez_A 222 PPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCS-CTEDSAIDSWSIISASPHKRQSEEESF 297 (504)
T ss_dssp --CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEE-CSSSSSSCEEEEEEBCSSSSCBCCCEE
T ss_pred ccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEec-CCCCcccceEEEEEcCCCCccceeEEC
Confidence 012367889999999999975 345 789999999999987 444 244443 34 57899
Q ss_pred CEEEECCCC------Cc--------ch-hhh-hccceeEEeeeehhh
Q 020312 279 KKVVCDPSY------LP--------NK-VII-IMLIGFILIFLVRRI 309 (328)
Q Consensus 279 d~vV~~~~~------~~--------~~-~~~-~~~~~~~~~~~~~~~ 309 (328)
|+||+++++ .+ +. +.. ...+..+++++++..
T Consensus 298 d~VI~a~p~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~ 344 (504)
T 1sez_A 298 DAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRE 344 (504)
T ss_dssp SEEEECSCHHHHHTSEEESSSSBCCCTTSCCCCEEEEEEEEEEEEGG
T ss_pred CEEEECCCHHHHHHHhhcccCCcccHHHHhcCCCCceEEEEEEEchh
Confidence 999998765 11 11 222 344667777777654
No 17
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.86 E-value=2.1e-20 Score=168.67 Aligned_cols=248 Identities=14% Similarity=0.122 Sum_probs=141.3
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCC-CeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceE
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (328)
++++||+|||||++||+||++|+++| ++|+|+|+++++||++.|.+. .++.+|.|++++
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~--------------------~G~~~d~G~~~~ 63 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNY--------------------HGRRYEMGAIMG 63 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEE--------------------TTEECCSSCCCB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCC--------------------CCcccccCceee
Confidence 46799999999999999999999999 999999999999999999864 357889999888
Q ss_pred ecCchHHH-HHHhcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhh-cccCCC--cc
Q 020312 81 IANGALVR-VLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQD-YDENDP--KT 156 (328)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~ 156 (328)
....+.+. .+.+.+.... .......+.+.+|..+ .+..+...... +. ....++...... +..... ..
T Consensus 64 ~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~~~g~~~-~~~~~~~~~~~-----~~-~~~~~l~~~~~~~~~~~~~~~~~ 134 (424)
T 2b9w_A 64 VPSYDTIQEIMDRTGDKVD--GPKLRREFLHEDGEIY-VPEKDPVRGPQ-----VM-AAVQKLGQLLATKYQGYDANGHY 134 (424)
T ss_dssp CTTCHHHHHHHHHHCCCCC--SCCCCEEEECTTSCEE-CGGGCTTHHHH-----HH-HHHHHHHHHHHTTTTTTTSSSSS
T ss_pred cCCcHHHHHHHHHhCCccc--cccccceeEcCCCCEe-ccccCcccchh-----HH-HHHHHHHHHHhhhhhhcccccch
Confidence 66544433 3334443211 0111112223344433 22111000000 00 112223222222 111100 00
Q ss_pred cccccCCCCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCCcCcHHH
Q 020312 157 HEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQ 236 (328)
Q Consensus 157 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG~~~l~~ 236 (328)
.........++.+|+++.+.+.....++.+.+.... ++....+....+..+.. ...+... . .+.+.+.+|++++++
T Consensus 135 ~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~-~~~~~~~-~-~~~~~~~~g~~~l~~ 210 (424)
T 2b9w_A 135 NKVHEDLMLPFDEFLALNGCEAARDLWINPFTAFGY-GHFDNVPAAYVLKYLDF-VTMMSFA-K-GDLWTWADGTQAMFE 210 (424)
T ss_dssp SCCCGGGGSBHHHHHHHTTCGGGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCH-HHHHHHH-H-TCCBCCTTCHHHHHH
T ss_pred hhhhhhhccCHHHHHHhhCcHHHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhH-hhhhccc-C-CceEEeCChHHHHHH
Confidence 011122458999999998776533333334332111 12222333222221111 0111111 1 123466899999999
Q ss_pred HHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCC
Q 020312 237 AFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (328)
Q Consensus 237 ~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~ 287 (328)
++.+. .+.++++|++|++|..+ ++++. |++++++++||+||++++.
T Consensus 211 ~l~~~---l~~~v~~~~~V~~i~~~-~~~v~-v~~~~g~~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 211 HLNAT---LEHPAERNVDITRITRE-DGKVH-IHTTDWDRESDVLVLTVPL 256 (424)
T ss_dssp HHHHH---SSSCCBCSCCEEEEECC-TTCEE-EEESSCEEEESEEEECSCH
T ss_pred HHHHh---hcceEEcCCEEEEEEEE-CCEEE-EEECCCeEEcCEEEECCCH
Confidence 98644 46789999999999987 66655 6775456999999988765
No 18
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.85 E-value=4.5e-20 Score=166.91 Aligned_cols=248 Identities=17% Similarity=0.102 Sum_probs=137.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecC-
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN- 83 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~- 83 (328)
+||||||||++||+||++|+++|++|+|||+++++||++.+.+.+ -.-++.+++|++++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~-----------------cipg~~~~~g~~~~~~~~ 64 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESR-----------------NVPGLRVEIGGAYLHRKH 64 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECS-----------------SSTTCEEESSCCCBCTTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceecc-----------------CCCCceEecCCeeeCCCC
Confidence 699999999999999999999999999999999999999887541 00157788899888655
Q ss_pred ch-HHHHHHhcCCCCeeEEEeeCceeEe--eCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCccc-cc
Q 020312 84 GA-LVRVLIHTDVTKYLYFKAVDGSFVY--NKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTH-EG 159 (328)
Q Consensus 84 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (328)
.. +.+.+.+.++... .........+ .++.............. .+. .....+.....++....+... ..
T Consensus 65 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~l~~~~~~~~~~~~~~~~~~ 136 (431)
T 3k7m_X 65 HPRLAAELDRYGIPTA--AASEFTSFRHRLGPTAVDQAFPIPGSEAV-----AVE-AATYTLLRDAHRIDLEKGLENQDL 136 (431)
T ss_dssp CHHHHHHHHHHTCCEE--ECCCCCEECCBSCTTCCSSSSCCCGGGHH-----HHH-HHHHHHHHHHTTCCTTTCTTSSSC
T ss_pred cHHHHHHHHHhCCeee--ecCCCCcEEEEecCCeecCCCCCCHHHHH-----HHH-HHHHHHHHHHHhcCCCCCccCcch
Confidence 33 3344444444311 1111111111 12211110000000100 011 223334433333321111111 11
Q ss_pred ccCCCCCHHHHHHhcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhc-ccCCCeEEeecCCcCcHHHHH
Q 020312 160 MDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIAR-FQGGSPYIYPLYGLGELPQAF 238 (328)
Q Consensus 160 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~~~~~~~~gG~~~l~~~l 238 (328)
...+ .++.+++++.+.++....++...............+....+..+......+.. ..... . .+.+|+..+++.+
T Consensus 137 ~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~l~~~~ 213 (431)
T 3k7m_X 137 EDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLD-E-VFSNGSADLVDAM 213 (431)
T ss_dssp GGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCC-E-EETTCTHHHHHHH
T ss_pred hhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchh-h-hcCCcHHHHHHHH
Confidence 1234 88999999888877766555433321112222222322222221111000000 00111 2 6688888888776
Q ss_pred HHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCC
Q 020312 239 ARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (328)
Q Consensus 239 ~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~ 286 (328)
+ ++.| +|++|++|++|..+ ++.+. |++ +|++++||+||++++
T Consensus 214 ~---~~~g-~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 214 S---QEIP-EIRLQTVVTGIDQS-GDVVN-VTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp H---TTCS-CEESSCCEEEEECS-SSSEE-EEETTSCCEEEEEEEECSC
T ss_pred H---hhCC-ceEeCCEEEEEEEc-CCeEE-EEECCCCEEEeCEEEEecC
Confidence 4 4557 99999999999987 66654 666 677799999998887
No 19
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.84 E-value=2.3e-19 Score=164.14 Aligned_cols=265 Identities=12% Similarity=0.099 Sum_probs=153.1
Q ss_pred CcccEEEECCChhHHHHHHhhhhCC-CeEEEeccCCCCCCccccc-chHHHHhhhcCCCCCCCccCCCCCeEEecCcceE
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSL-NLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (328)
..+||+|||||++||+||++|+++| .+|+|+|+++++||++.+. .. .++.+|.|++++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~--------------------~g~~~~~g~~~~ 67 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDE--------------------NGFTWDLGGHVI 67 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECT--------------------TSCEEESSCCCB
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecC--------------------CCcEEeeCCccc
Confidence 3589999999999999999999999 8999999999999999985 32 468899999998
Q ss_pred ecCchHHHHHHhcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhH-HHHHHHHHHHhhcccCCCccccc
Q 020312 81 IANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEK-RRARKFFIYVQDYDENDPKTHEG 159 (328)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
....+.+..+.+....+.. ......+.+.+|+.+.+|.... +. ..+.-.+ ..+..++.......
T Consensus 68 ~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~g~~~~~P~~~~--~~--~l~~~~~~~~~~~ll~~~~~~~--------- 132 (484)
T 4dsg_A 68 FSHYQYFDDVMDWAVQGWN--VLQRESWVWVRGRWVPYPFQNN--IH--RLPEQDRKRCLDELVRSHARTY--------- 132 (484)
T ss_dssp CCSBHHHHHHHHHHCSCEE--EEECCCEEEETTEEEESSGGGC--GG--GSCHHHHHHHHHHHHHHHHCCC---------
T ss_pred ccChHHHHHHHHHHhhhhh--hccCceEEEECCEEEEeCccch--hh--hCCHHHHHHHHHHHHHHHhccC---------
Confidence 7766555444433233332 2233456667899988883211 11 0111110 11122222211110
Q ss_pred ccCCCCCHHHHHHhcCCChhH-HHHHhhhh-hcccC--CC----CC--CCchHHHHHHHHHHHHhhhc--ccCCCeEEee
Q 020312 160 MDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRD--DR----YL--NEPALDTVKRMKLYAESIAR--FQGGSPYIYP 227 (328)
Q Consensus 160 ~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~-~l~~~--~~----~~--~~~~~~~l~~~~~~~~~~~~--~~g~~~~~~~ 227 (328)
..+..++.+|+.+. +...+ ..++.+.. ..+.. .. +. ..+.......+......... ......+.||
T Consensus 133 -~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp 210 (484)
T 4dsg_A 133 -TEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFP 210 (484)
T ss_dssp -SSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEE
T ss_pred -CCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEee
Confidence 11457899988765 33322 11222211 11110 00 00 01110111111111111000 0013346677
Q ss_pred c-CCcCcHHHHHHHHHHHcCcEEEcC--cceeEEEecCCCcEEEEEecCceEEcCEEEECCCC-------------Ccch
Q 020312 228 L-YGLGELPQAFARLSAVYGGTYMLN--KPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY-------------LPNK 291 (328)
Q Consensus 228 ~-gG~~~l~~~l~~~~~~~G~~i~~~--~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~-------------~~~~ 291 (328)
. ||++.++++|++.+.+ .+|+++ ++|++|..+ ++.++ ..+|+++.||+||++++. .|+.
T Consensus 211 ~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~-~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~ 285 (484)
T 4dsg_A 211 QRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD-AKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDE 285 (484)
T ss_dssp SSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT-TTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGG
T ss_pred cCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec-CCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHH
Confidence 5 8999999999876543 279999 569999987 66432 247788999999988764 1222
Q ss_pred hh----h-hccceeEEeeeehhh
Q 020312 292 VI----I-IMLIGFILIFLVRRI 309 (328)
Q Consensus 292 ~~----~-~~~~~~~~~~~~~~~ 309 (328)
+. . ...+..+++++++..
T Consensus 286 ~~~~l~~l~y~s~~~v~l~~~~~ 308 (484)
T 4dsg_A 286 WPAIADKMVYSSTNVIGIGVKGT 308 (484)
T ss_dssp HHHHHHHCCEEEEEEEEEEEESC
T ss_pred HHHHHhCCCcCceEEEEEEEcCC
Confidence 21 2 456777888888765
No 20
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.83 E-value=2.2e-20 Score=172.66 Aligned_cols=236 Identities=15% Similarity=0.165 Sum_probs=124.5
Q ss_pred CcccEEEECCChhHHHHHHhhhhCC-CeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEe
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G-~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (328)
.++||+|||||++||+||++|+++| ++|+|||+++++||++.|.+.. .++.+|+|++++.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~-------------------~G~~~D~G~~~~~ 67 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY-------------------QGRKYDIGASWHH 67 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------GGCEEESSCCEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------CCcEEecCCeEEe
Confidence 3589999999999999999999999 9999999999999999987531 2578999999987
Q ss_pred cC--chHHHHHHhcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCccccc
Q 020312 82 AN--GALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (328)
Q Consensus 82 ~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
.. +++...+.+.++... ...+.+.++..+.++.. ...........+. .....+..+........
T Consensus 68 ~~~~~~~~~~~~~lg~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 133 (516)
T 1rsg_A 68 DTLTNPLFLEEAQLSLNDG------RTRFVFDDDNFIYIDEE-RGRVDHDKELLLE-IVDNEMSKFAELEFHQH------ 133 (516)
T ss_dssp CTTTCHHHHHHHHHHHHHC------CCCEECCCCCCEEEETT-TEECTTCTTTCHH-HHHHHHHHHHHHHC---------
T ss_pred cCCCChHHHHHHHhCCCCc------ceeEEECCCCEEEEcCC-CccccccHHHHHH-HHHHHHHHHHHHHhhhc------
Confidence 53 445444433322100 00111122222212111 0011000000111 11112222221111100
Q ss_pred ccCCCCCHHHHHHhc------CCChhHHHHHhhhh---hcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCC
Q 020312 160 MDLTRVTTRELIAKY------GLDDNTIDFIGHAL---ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYG 230 (328)
Q Consensus 160 ~~~~~~s~~~~~~~~------~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG 230 (328)
...+..|+.++++++ .+.+....++...+ ..+........+.... +....+ ...++++
T Consensus 134 ~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~----------~~~~~~--~~~~~~g- 200 (516)
T 1rsg_A 134 LGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAKDT----------YFGHQG--RNAFALN- 200 (516)
T ss_dssp ----CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCTTTSBHHHH----------CCCCSS--CCEEESC-
T ss_pred cCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCChHHCChHHH----------HhhccC--cchhhhC-
Confidence 012457788876543 12221111111111 1111111111111100 111112 2235566
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCC
Q 020312 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (328)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~ 287 (328)
++.++++|++.+. +++|++|++|++|..+ ++..+.|++ +|++++||+||+++++
T Consensus 201 ~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~-~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 201 YDSVVQRIAQSFP--QNWLKLSCEVKSITRE-PSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp HHHHHHHHHTTSC--GGGEETTCCEEEEEEC-TTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred HHHHHHHHHHhCC--CCEEEECCEEEEEEEc-CCCeEEEEECCCcEEECCEEEECCCH
Confidence 7788888765443 3679999999999986 444456777 7778999999998764
No 21
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.83 E-value=1.1e-19 Score=167.08 Aligned_cols=288 Identities=13% Similarity=0.044 Sum_probs=148.4
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEe
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (328)
++++||+|||||++||+||++|+++|++|+|||+++++||++.+.+.+. .+..-...........++.++.|++++.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGS---EETDLSGETQKCTFSEGHFYNVGATRIP 85 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTC---EEECTTSCEEECCCCTTCEEESSCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCc---ccccccchhhhhcccCCCcCCcchhhcc
Confidence 4578999999999999999999999999999999999999998876420 0000000000000114567888888887
Q ss_pred cCchHHHHHHhcCCCCeeEEEee-CceeEe-eC-----CeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCC
Q 020312 82 ANGALVRVLIHTDVTKYLYFKAV-DGSFVY-NK-----GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDP 154 (328)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~-~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (328)
....+.+.+.+.++... .+... ...+.+ .+ |..+..+.. ...+ +. .+..+............
T Consensus 86 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-------~~--~~~~l~~~~~~~~~~~~ 154 (489)
T 2jae_A 86 QSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAA-KADT-------FG--YMSELLKKATDQGALDQ 154 (489)
T ss_dssp TTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHH-HHHH-------HH--HHHHHHHHHHHHTTTTT
T ss_pred cHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHH-hhhh-------hc--cHHHHHHHHHhcccccc
Confidence 66555555556665422 11111 122333 33 333332210 0000 00 01111111111000000
Q ss_pred cccccccCCCCCHHHHHHhcCCC-------hhH-HHHHhhhhhcccCCCCCCC-chHHHHHH-HHHHHHhhhcccCCCeE
Q 020312 155 KTHEGMDLTRVTTRELIAKYGLD-------DNT-IDFIGHALALHRDDRYLNE-PALDTVKR-MKLYAESIARFQGGSPY 224 (328)
Q Consensus 155 ~~~~~~~~~~~s~~~~~~~~~~~-------~~~-~~~~~~~~~l~~~~~~~~~-~~~~~l~~-~~~~~~~~~~~~g~~~~ 224 (328)
.. ...+..++.+|+++++-. ... ..++............... .+...... +..+............+
T Consensus 155 ~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (489)
T 2jae_A 155 VL---SREDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMM 231 (489)
T ss_dssp TS---CHHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSE
T ss_pred cc---chhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCccE
Confidence 00 001234677777753210 000 0000000000000000000 11111000 00011100011123567
Q ss_pred EeecCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cC---ceEEcCEEEECCCC---------Ccch
Q 020312 225 IYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG---ETAKCKKVVCDPSY---------LPNK 291 (328)
Q Consensus 225 ~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g---~~~~ad~vV~~~~~---------~~~~ 291 (328)
++++||++.|+++|++.+.+ ++|++|++|++|..+ ++++. |++ ++ ++++||+||+++++ +|+.
T Consensus 232 ~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~l~~~ 307 (489)
T 2jae_A 232 FTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNV-SEGVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQNNLPGD 307 (489)
T ss_dssp EEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEE-TTEEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEECCCHH
T ss_pred EeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEc-CCeEE-EEEecCCeEEEEECCEEEECCCHHHHHhCccCCCHH
Confidence 88999999999999876532 789999999999988 66655 544 55 57999999998765 2222
Q ss_pred h----hh-hccceeEEeeeehhhh
Q 020312 292 V----II-IMLIGFILIFLVRRIL 310 (328)
Q Consensus 292 ~----~~-~~~~~~~~~~~~~~~~ 310 (328)
. .+ ...+.++++++++...
T Consensus 308 ~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 308 VLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp HHHHHHTEECCCEEEEEEEESSCH
T ss_pred HHHHHHhCCCccceEEEEEeCCCC
Confidence 1 12 4557789999988753
No 22
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.82 E-value=1e-18 Score=160.95 Aligned_cols=268 Identities=18% Similarity=0.197 Sum_probs=150.4
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEec
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (328)
..+||+|||||++||+||+.|+++|++|+|||+++++||++.+.... ..++.+|.|++++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~------------------~~~~~~~~g~~~~~~ 93 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNE------------------EAGWYANLGPMRLPE 93 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEET------------------TTTEEEESSCCCEET
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccC------------------CCCchhhcCcccccc
Confidence 36899999999999999999999999999999999999999887521 146888999999877
Q ss_pred CchHHHHHH-hcCCCCeeEEEe-eCceeEeeCCeEEEcCC--CchhhhcCCCC------C---hhhHHHHHHHHHHHhhc
Q 020312 83 NGALVRVLI-HTDVTKYLYFKA-VDGSFVYNKGKVHKVPA--TDMEALKSPLM------G---IFEKRRARKFFIYVQDY 149 (328)
Q Consensus 83 ~~~~~~~~~-~~~~~~~l~~~~-~~~~~~~~~g~~~~~~~--~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~ 149 (328)
....+..+. +.++... .+.. ....+...+|.....+. .....+...+. . ++. ....++...+...
T Consensus 94 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 171 (498)
T 2iid_A 94 KHRIVREYIRKFDLRLN-EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYE-ESLGKVVEELKRT 171 (498)
T ss_dssp TCHHHHHHHHHTTCCEE-EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHH-HHTHHHHHHHHHS
T ss_pred hHHHHHHHHHHhCCCce-eecccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHH-HHHHHHHHHHhhc
Confidence 655555444 4444311 1211 12223333443322110 00011111100 0 000 0111111111111
Q ss_pred ccCCCcccccccCCCCCHHHHHHhcC-CChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeec
Q 020312 150 DENDPKTHEGMDLTRVTTRELIAKYG-LDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPL 228 (328)
Q Consensus 150 ~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 228 (328)
.. .. ....++..++.+|+++.+ ++......+...+.. ...........+.... .+ .....+++++
T Consensus 172 ~~--~~--~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~ 237 (498)
T 2iid_A 172 NC--SY--ILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNE---DSGYYVSFIESLKHDD----IF---AYEKRFDEIV 237 (498)
T ss_dssp CH--HH--HHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTC---GGGTTSBHHHHHHHHH----HH---TTCCCEEEET
T ss_pred cH--HH--HHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCc---ccchhHHHHHHHHHHh----cc---ccCcceEEeC
Confidence 00 00 001125578999998875 555544443322210 0000111111111110 11 1234577889
Q ss_pred CCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCc----eEEcCEEEECCCC-----------Ccchh
Q 020312 229 YGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE----TAKCKKVVCDPSY-----------LPNKV 292 (328)
Q Consensus 229 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~----~~~ad~vV~~~~~-----------~~~~~ 292 (328)
||++.++++|++.+.. +|++|++|++|..+ ++.+ .|++ +++ +++||+||+++++ +|+..
T Consensus 238 gG~~~l~~~l~~~l~~---~i~~~~~V~~I~~~-~~~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~ 312 (498)
T 2iid_A 238 DGMDKLPTAMYRDIQD---KVHFNAQVIKIQQN-DQKV-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKK 312 (498)
T ss_dssp TCTTHHHHHHHHHTGG---GEESSCEEEEEEEC-SSCE-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHH
T ss_pred CcHHHHHHHHHHhccc---ccccCCEEEEEEEC-CCeE-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHH
Confidence 9999999999876543 89999999999988 6664 4444 443 4899999998765 12221
Q ss_pred ----hh-hccceeEEeeeehhh
Q 020312 293 ----II-IMLIGFILIFLVRRI 309 (328)
Q Consensus 293 ----~~-~~~~~~~~~~~~~~~ 309 (328)
++ ...+..+++++++..
T Consensus 313 ~~ai~~l~~~~~~kv~l~~~~~ 334 (498)
T 2iid_A 313 AHALRSVHYRSGTKIFLTCTTK 334 (498)
T ss_dssp HHHHHHCCEECEEEEEEEESSC
T ss_pred HHHHHhCCCcceeEEEEEeCCC
Confidence 12 344566888888765
No 23
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.80 E-value=8.5e-20 Score=161.39 Aligned_cols=250 Identities=14% Similarity=0.134 Sum_probs=143.1
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEE-ecCcceEe
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV-DMIPKFII 81 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~ 81 (328)
..+||+|||||++||+||++|+++|++|+|+|+++++||++.+.... .++.+ +.|++++.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~-------------------~G~~~~~~G~~~~~ 88 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDD-------------------AGVLIHPYGPHIFH 88 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECT-------------------TSCEECTTSCCCCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeecc-------------------CCceEeecCCcccC
Confidence 46899999999999999999999999999999999999999887511 34554 88999988
Q ss_pred cCchHHHHHHh-cCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCCh-hhHHHHHHHHHHHhhcccCCCccccc
Q 020312 82 ANGALVRVLIH-TDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGI-FEKRRARKFFIYVQDYDENDPKTHEG 159 (328)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
...+.+..+.+ .+. . .......+.+.+|+.+++|.+ ...+.. ++++ ........++. +... +
T Consensus 89 ~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~g~l~~lP~~-~~~~~~-l~~~~~~~~~~~~~l~---~~~~--~----- 152 (397)
T 3hdq_A 89 TNSKDVFEYLSRFTE--W--RPYQHRVLASVDGQLLPIPIN-LDTVNR-LYGLNLTSFQVEEFFA---SVAE--K----- 152 (397)
T ss_dssp ESCHHHHHHHHTSCC--E--EECCCBEEEEETTEEEEESCC-HHHHHH-HHTCCCCHHHHHHHHH---HHCC--C-----
T ss_pred CChHHHHHHHHHhhh--c--ccccccceEEECCEEEEcCCC-hHHHHH-hhccCCCHHHHHHHHh---hccc--C-----
Confidence 66554444443 331 1 112234456679999999865 322211 1110 11122333332 1110 0
Q ss_pred ccCCCCCHHHHHHhcCCChhH-HHHHhhhh-hcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeE-EeecCCcCcHHH
Q 020312 160 MDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPY-IYPLYGLGELPQ 236 (328)
Q Consensus 160 ~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~-~~~~gG~~~l~~ 236 (328)
..+..++.+|+.+. +...+ ..++.+.. ..|..+ ....+.. .+.++......-..+ ....+ .+|++|..++++
T Consensus 153 -~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~-~~~Lsa~-~~~Rvp~~~~~d~~y-f~~~~qg~P~gGy~~l~e 227 (397)
T 3hdq_A 153 -VEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLD-PSELDAS-VTARVPTRTNRDNRY-FADTYQAMPLHGYTRMFQ 227 (397)
T ss_dssp -CSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSC-GGGSBTT-TGGGSCCCSSCCCBS-CCCSEEEEETTCHHHHHH
T ss_pred -CCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCC-HHHHHHH-HHHhcCcccccCccc-hhhhheeccCCCHHHHHH
Confidence 12567899998665 33333 44555543 333211 1111110 011110000000000 02233 479999999998
Q ss_pred HHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCC---Ccchhhh-hccceeEEeeeehhh
Q 020312 237 AFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY---LPNKVII-IMLIGFILIFLVRRI 309 (328)
Q Consensus 237 ~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~---~~~~~~~-~~~~~~~~~~~~~~~ 309 (328)
+|+ +..|++|++|++|+++ +..+.||+||+|+++ ......+ ...|..+++++++..
T Consensus 228 ~l~---~~~g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~d~~~~~~~g~L~yrsl~~~~~~~~~~ 287 (397)
T 3hdq_A 228 NML---SSPNIKVMLNTDYREI--------------ADFIPFQHMIYTGPVDAFFDFCYGKLPYRSLEFRHETHDTE 287 (397)
T ss_dssp HHT---CSTTEEEEESCCGGGT--------------TTTSCEEEEEECSCHHHHTTTTTCCCCEEEEEEEEEEESSS
T ss_pred HHH---hccCCEEEECCeEEec--------------cccccCCEEEEcCCHHHHHHHhcCCCCCceEEEEEEEeccc
Confidence 885 4569999999999843 234678999988753 1111222 345555666666543
No 24
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.79 E-value=7.4e-18 Score=147.79 Aligned_cols=243 Identities=12% Similarity=0.170 Sum_probs=134.4
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccC-CCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceE
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN-DYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~-~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (328)
+..+||+|||||++||+||++|+++|++|+|||++ +++||++.+..... + .+... ...++.++.|++++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~---~------~~~~~-~~~~~~~e~G~~~~ 111 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK---G------EPSPF-ADPAQYAEAGAMRL 111 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT---T------SCCSS-SSTTCCEESSCCCE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc---c------ccccc-cCCCcEEecCceee
Confidence 34689999999999999999999999999999999 99999999875310 0 00000 02457889999998
Q ss_pred ecCchHHHHH-HhcCCCCeeEEEee-----------------------------------------CceeEeeCCeEEEc
Q 020312 81 IANGALVRVL-IHTDVTKYLYFKAV-----------------------------------------DGSFVYNKGKVHKV 118 (328)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~~l~~~~~-----------------------------------------~~~~~~~~g~~~~~ 118 (328)
....+.+..+ .+.++......... ...+.+.+|.....
T Consensus 112 ~~~~~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~ 191 (376)
T 2e1m_A 112 PSFHPLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRR 191 (376)
T ss_dssp ETTCHHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEH
T ss_pred cchHHHHHHHHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceecc
Confidence 7766544433 34555443322211 11122233333221
Q ss_pred CC--Cchhhhc-----------CCCCChhhHHHHHHHHHHHhhcccC-------CC---ccccc--ccCCCCCHHHHHH-
Q 020312 119 PA--TDMEALK-----------SPLMGIFEKRRARKFFIYVQDYDEN-------DP---KTHEG--MDLTRVTTRELIA- 172 (328)
Q Consensus 119 ~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~--~~~~~~s~~~~~~- 172 (328)
.. ..+..+. ..+..++ ...+.++...+...... .+ ..+.. ..++..|+.+|++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~S~~~~L~~ 270 (376)
T 2e1m_A 192 AQYATDPSSINEGFHLTGCETRLTVSDMV-NQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWADVVRDFDGYSMGRFLRE 270 (376)
T ss_dssp HHHHHCTHHHHHHTTCCGGGGGSCHHHHH-HHHHHHHHHHHEEEETTTEEEECCHHHHHHHHHHHHHHHTTCBHHHHHHH
T ss_pred cccccCHHHhccccCCchhhcccCHHHHH-HHHHHHHHHhhhhccccccccccccchhhccchHHHHHHhCCCHHHHHhh
Confidence 00 0000000 0000001 11223333322210000 00 00111 1357899999998
Q ss_pred hcCCChhHHHHHhhhhhcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeEEeecCCcCcHHHHHHHHHHHcCcEEEcC
Q 020312 173 KYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLN 252 (328)
Q Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~ 252 (328)
+.++++...+++..... .......+....+ .... .+.+...++.+.||+++|+++|++.+ +.+|++|
T Consensus 271 ~~g~s~~~~~~~~~~~~---~~~~~~~s~l~~l------~~~~-~~~~~~~~~~i~GG~~~l~~~l~~~l---~~~i~l~ 337 (376)
T 2e1m_A 271 YAEFSDEAVEAIGTIEN---MTSRLHLAFFHSF------LGRS-DIDPRATYWEIEGGSRMLPETLAKDL---RDQIVMG 337 (376)
T ss_dssp TSCCCHHHHHHHHHHTT---CTTTTTSBHHHHH------HHCS-CSCTTCCEEEETTCTTHHHHHHHHHG---GGTEECS
T ss_pred ccCCCHHHHHHHHhhcC---ccccchhhHHHHH------HHhh-hhccCCceEEECCcHHHHHHHHHHhc---CCcEEec
Confidence 78899988766543321 1111122222221 1111 11235668899999999999998654 5789999
Q ss_pred cceeEEEecCCCcEEEE
Q 020312 253 KPECKVEFDEEGKVVGV 269 (328)
Q Consensus 253 ~~V~~I~~~~~~~v~~v 269 (328)
++|++|.++ ++.+..+
T Consensus 338 ~~V~~I~~~-~~gv~v~ 353 (376)
T 2e1m_A 338 QRMVRLEYY-DPGRDGH 353 (376)
T ss_dssp EEEEEEEEC-CCC----
T ss_pred CeEEEEEEC-CCceEEE
Confidence 999999998 4444433
No 25
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.78 E-value=2.4e-20 Score=166.64 Aligned_cols=235 Identities=16% Similarity=0.177 Sum_probs=132.4
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhC-CCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEE-ecCcc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV-DMIPK 78 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~-G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~ 78 (328)
|++++||+|||||++||+||++|+++ |++|+|+|+++++||++.+.... ..++.+ +.|++
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~------------------~~g~~~~~~G~~ 65 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEP------------------QTGIEVHKYGAH 65 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECT------------------TTCCEEETTSCC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeecccc------------------CCCEEEEeCCCc
Confidence 44579999999999999999999999 99999999999999999998531 024666 48999
Q ss_pred eEecCchHHHHHH-hcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCCh-hhHHHHHHHHH-HHhhcccCCCc
Q 020312 79 FIIANGALVRVLI-HTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGI-FEKRRARKFFI-YVQDYDENDPK 155 (328)
Q Consensus 79 ~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~ 155 (328)
++....+.+..+. +.+.... .....+.+.+|+.+.+|.. ...+.. +... +.+..+..++. ......
T Consensus 66 ~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~G~~~~~p~~-~~~~~~-l~~~~~~~~~~~~~l~~~~~~~~----- 134 (399)
T 1v0j_A 66 LFHTSNKRVWDYVRQFTDFTD----YRHRVFAMHNGQAYQFPMG-LGLVSQ-FFGKYFTPEQARQLIAEQAAEID----- 134 (399)
T ss_dssp CEEESCHHHHHHHTTTCCBCC----CCCCEEEEETTEEEEESSS-HHHHHH-HHTSCCCHHHHHHHHHHHGGGSC-----
T ss_pred EEcCCcHHHHHHHHHhhhhhc----cccceEEEECCEEEeCCCC-HHHHHH-HhcccCCHHHHHHHHHHHhhccC-----
Confidence 8876554433333 3343111 1223445568888888854 222211 0000 01112222221 111110
Q ss_pred ccccccCCCCCHHHHHHhcCCChhH-HHHHhhhh-hcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeE-EeecCCcC
Q 020312 156 THEGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPY-IYPLYGLG 232 (328)
Q Consensus 156 ~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~-~~~~gG~~ 232 (328)
..+..++.+|+.+. +.+.+ ..++.+.. ..+..+. ...+.... .++.........+ ....+ .+|+||++
T Consensus 135 -----~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~-~~ls~~~~-~~~~~~~~~~~~~-~~~~~~~~p~gG~~ 205 (399)
T 1v0j_A 135 -----TADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDP-KELPAANI-TRLPVRYTFDNRY-FSDTYEGLPTDGYT 205 (399)
T ss_dssp -----TTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCG-GGSCGGGC-SCCCCCSSSCCCS-CCCSEEECBTTHHH
T ss_pred -----CCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCCh-hhcChHhh-hcceeEeccccch-hhhhhcccccccHH
Confidence 11456788888764 44444 44444433 2332111 11111100 0000000000000 12234 38999999
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceE-EcCEEEECCCC
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETA-KCKKVVCDPSY 287 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~-~ad~vV~~~~~ 287 (328)
+++++|++ +.|++|++|++|++|..+ | +.+ +||+||++++.
T Consensus 206 ~l~~~l~~---~~g~~I~l~~~V~~I~~~-------v----~~~~~aD~VI~t~p~ 247 (399)
T 1v0j_A 206 AWLQNMAA---DHRIEVRLNTDWFDVRGQ-------L----RPGSPAAPVVYTGPL 247 (399)
T ss_dssp HHHHHHTC---STTEEEECSCCHHHHHHH-------H----TTTSTTCCEEECSCH
T ss_pred HHHHHHHh---cCCeEEEECCchhhhhhh-------h----hhcccCCEEEECCcH
Confidence 99999864 568999999999999632 1 145 79999998764
No 26
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.77 E-value=2.1e-19 Score=158.77 Aligned_cols=249 Identities=13% Similarity=0.096 Sum_probs=139.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEe-cCcceEec
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVD-MIPKFIIA 82 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 82 (328)
++||+|||||++||+||++|+++|++|+|+|+++++||++.+... .++.++ .|++++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~--------------------~g~~~~~~G~~~~~~ 60 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDC--------------------EGIQIHKYGAHIFHT 60 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEE--------------------TTEEEETTSCCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeecc--------------------CCceeeccCCceecC
Confidence 379999999999999999999999999999999999999988753 356774 89999887
Q ss_pred CchHHHHHH-hcCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCccccccc
Q 020312 83 NGALVRVLI-HTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMD 161 (328)
Q Consensus 83 ~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
..+.+-.+. +.+. .. ........+.+|+.+.+|.+ ...+..-+.. ..+..+..+........ . .
T Consensus 61 ~~~~~~~~~~~l~~--~~--~~~~~~~~~~~g~~~~~p~~-~~~~~~l~~~-~~~~~~~~~l~~~~~~~---~------~ 125 (367)
T 1i8t_A 61 NDKYIWDYVNDLVE--FN--RFTNSPLAIYKDKLFNLPFN-MNTFHQMWGV-KDPQEAQNIINAQKKKY---G------D 125 (367)
T ss_dssp SCHHHHHHHHTTSC--BC--CCCCCCEEEETTEEEESSBS-HHHHHHHHCC-CCHHHHHHHHHHHTTTT---C------C
T ss_pred CCHHHHHHHHHhhh--hh--hccccceEEECCeEEEcCCC-HHHHHHHhcc-CCHHHHHHHHHHHhhcc---C------C
Confidence 654333333 2222 11 11122234457888888754 2222210000 01223333333222110 0 1
Q ss_pred CCCCCHHHHHHhcCCChhH-HHHHhhhh-hcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeE-EeecCCcCcHHHHH
Q 020312 162 LTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPY-IYPLYGLGELPQAF 238 (328)
Q Consensus 162 ~~~~s~~~~~~~~~~~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~-~~~~gG~~~l~~~l 238 (328)
.+..++.+|+.+. +.+.+ ..++.+.. ..+..+. ...+.... .++......-..+ ....| .+|+||+++++++|
T Consensus 126 ~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~-~~lsa~~~-~~l~~~~~~~~~~-~~~~~~~~p~gG~~~l~~~l 201 (367)
T 1i8t_A 126 KVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSA-KELPAFII-KRIPVRFTFDNNY-FSDRYQGIPVGGYTKLIEKM 201 (367)
T ss_dssp CCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCG-GGSCTTSS-CCCCBCSSSCCCS-CCCSEEECBTTCHHHHHHHH
T ss_pred CCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCCh-HHcCHHHH-hhceeeecccccc-ccchhhcccCCCHHHHHHHH
Confidence 1457899998776 44444 34554433 2332111 11111000 0000000000000 12334 38999999999998
Q ss_pred HHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCC---cchhhh-hccceeEEeeeehh
Q 020312 239 ARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL---PNKVII-IMLIGFILIFLVRR 308 (328)
Q Consensus 239 ~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~---~~~~~~-~~~~~~~~~~~~~~ 308 (328)
++ |++|++|++|++|.. .+ .+.||+||++++.- .-.+.. ...+..++.++++.
T Consensus 202 ~~-----g~~i~l~~~V~~i~~----~v--------~~~~D~VV~a~p~~~~~~~~l~~l~y~s~~~v~~~~d~ 258 (367)
T 1i8t_A 202 LE-----GVDVKLGIDFLKDKD----SL--------ASKAHRIIYTGPIDQYFDYRFGALEYRSLKFETERHEF 258 (367)
T ss_dssp HT-----TSEEECSCCGGGSHH----HH--------HTTEEEEEECSCHHHHTTTTTCCCCEEEEEEEEEEESS
T ss_pred hc-----CCEEEeCCceeeech----hh--------hccCCEEEEeccHHHHHHHhhCCCCCceEEEEEEEecc
Confidence 64 689999999999852 11 25689999887641 111222 34445555565554
No 27
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.76 E-value=2e-18 Score=153.28 Aligned_cols=229 Identities=13% Similarity=0.146 Sum_probs=132.2
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEE-ecCcceEe
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV-DMIPKFII 81 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~ 81 (328)
+++||+|||||++||++|++|+++|++|+|+|+++++||++.+.... ..++.+ +.|++++.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~------------------~~g~~~~~~G~~~~~ 63 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDS------------------ETNVMVHVYGPHIFH 63 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECT------------------TTCCEEETTSCCCEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccccccc------------------CCCceEeeCCceEEC
Confidence 35899999999999999999999999999999999999999887541 124554 88999988
Q ss_pred cCchHHHHHHh-cCCCCeeEEEeeCceeEeeCCeEEEcCCCchhhhcCCCCChhhHHHHHHHHHHHhhcccCCCcccccc
Q 020312 82 ANGALVRVLIH-TDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGM 160 (328)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
..++.+..+.. .+. .. ........+.+|+.+.+|.. ...+...+...+.+....+++ .+.....
T Consensus 64 ~~~~~~~~~~~~l~~--~~--~~~~~~~~~~~g~~~~~P~~-~~~~~~l~~~~~~~~~~~~~l---~~~~~~~------- 128 (384)
T 2bi7_A 64 TDNETVWNYVNKHAE--MM--PYVNRVKATVNGQVFSLPIN-LHTINQFFSKTCSPDEARALI---AEKGDST------- 128 (384)
T ss_dssp ESCHHHHHHHHTTSC--EE--ECCCCEEEEETTEEEEESCC-HHHHHHHTTCCCCHHHHHHHH---HHHSCCS-------
T ss_pred CCCHHHHHHHHHHhh--hc--ccccceEEEECCEEEECCCC-hhHHHHHhcccCCHHHHHHHH---HHhhhcc-------
Confidence 76544443333 332 11 11223345568888888754 222221110001122233222 2221110
Q ss_pred cCCCCCHHHHHHhcCCChhH-HHHHhhhh-hcccCCCCCCCchHHHHHHHHHHHHhhhcccCCCeE-EeecCCcCcHHHH
Q 020312 161 DLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPY-IYPLYGLGELPQA 237 (328)
Q Consensus 161 ~~~~~s~~~~~~~~~~~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~-~~~~gG~~~l~~~ 237 (328)
..+..++.+|+.+. +.+.+ ..++.+.. +.|..+. ...+.... .++.........+ ....+ .+|+||+++++++
T Consensus 129 ~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~-~~ls~~~~-~r~~~~~~~~~~~-~~~~~~~~p~gG~~~l~~~ 204 (384)
T 2bi7_A 129 IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQP-SELPASIL-KRLPVRFNYDDNY-FNHKFQGMPKCGYTQMIKS 204 (384)
T ss_dssp CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCG-GGSBGGGC-CSCCCCSSSCCCS-CCCSEEEEETTHHHHHHHH
T ss_pred CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCH-HHhCHHHH-hcccccccccccc-ccccccEEECcCHHHHHHH
Confidence 12567899998776 44544 44554433 2332111 11111000 0000000000011 12334 3999999999999
Q ss_pred HHHHHHHcCcEEEcCccee-EEEecCCCcEEEEEecCceEEcCEEEECCCC
Q 020312 238 FARLSAVYGGTYMLNKPEC-KVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (328)
Q Consensus 238 l~~~~~~~G~~i~~~~~V~-~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~ 287 (328)
|++ +.|++|++|++|+ +|.. .||+||++++.
T Consensus 205 l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~p~ 236 (384)
T 2bi7_A 205 ILN---HENIKVDLQREFIVEERT----------------HYDHVFYSGPL 236 (384)
T ss_dssp HHC---STTEEEEESCCCCGGGGG----------------GSSEEEECSCH
T ss_pred HHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcCCH
Confidence 864 4689999999999 8842 28888877653
No 28
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.75 E-value=1.7e-17 Score=151.76 Aligned_cols=241 Identities=15% Similarity=0.141 Sum_probs=128.3
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCC-eEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcce
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 79 (328)
++.++||+|||||++||+||++|+++|+ +|+|+|+++++||++.+... .++.+|.|+++
T Consensus 1 ~~~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~--------------------~~~~~d~g~~~ 60 (472)
T 1b37_A 1 ATVGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNF--------------------AGINVELGANW 60 (472)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEE--------------------TTEEEESSCCE
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeeccc--------------------CCcEEeeCCeE
Confidence 3567899999999999999999999998 89999999999999998764 46889999999
Q ss_pred Eec-----CchHHHHHHh-cCCCCeeEEEeeCc--eeEee-CCeEEEcCCCchhhhcCCCCChhhH-HHHHHHHHHHhhc
Q 020312 80 IIA-----NGALVRVLIH-TDVTKYLYFKAVDG--SFVYN-KGKVHKVPATDMEALKSPLMGIFEK-RRARKFFIYVQDY 149 (328)
Q Consensus 80 ~~~-----~~~~~~~~~~-~~~~~~l~~~~~~~--~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 149 (328)
+.. ..++.+.+.+ .++... ...... ...+. +|+.+..+ .... .+.. .....+.+.....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~lgl~~~--~~~~~~~~~~~~~~~g~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~~ 129 (472)
T 1b37_A 61 VEGVNGGKMNPIWPIVNSTLKLRNF--RSDFDYLAQNVYKEDGGVYDED-----YVQK----RIELADSVEEMGEKLSAT 129 (472)
T ss_dssp EEEESSSSCCTHHHHHHTTSCCCEE--ECCCTTGGGCEECSSSSBCCHH-----HHHH----HHHHHHHHHHHHHHHHHT
T ss_pred EeccCCCCCCHHHHHHHhhcCCcee--eccCccccceeEcCCCCCCCHH-----HHHH----HHHHHHHHHHHHHHHHHh
Confidence 973 2345555444 444322 111111 11221 33322111 0000 0100 1112222211111
Q ss_pred ccCCCcccccccCCCCCHHH--HHHhcCC--C-hhHHHHHhhhh-hcccCCCCCCCchHHHHHHHHHHHHhhhcccCCC-
Q 020312 150 DENDPKTHEGMDLTRVTTRE--LIAKYGL--D-DNTIDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGS- 222 (328)
Q Consensus 150 ~~~~~~~~~~~~~~~~s~~~--~~~~~~~--~-~~~~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~- 222 (328)
. .+ ...+.+++.+ ++.+... . .....++.... ...........++...... . .+..+ +..
T Consensus 130 ~--~~-----~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~----~~~~~-~~~~ 196 (472)
T 1b37_A 130 L--HA-----SGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-A----TFSDF-GDDV 196 (472)
T ss_dssp S--CT-----TCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-H----HHHHH-CSEE
T ss_pred h--cc-----ccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-c----ccccc-CCce
Confidence 1 00 0113445443 3433211 1 11122222111 0000000000000000000 0 00111 222
Q ss_pred eEEeecCCcCcHHHHHHHHHHHc--------CcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCC
Q 020312 223 PYIYPLYGLGELPQAFARLSAVY--------GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (328)
Q Consensus 223 ~~~~~~gG~~~l~~~l~~~~~~~--------G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~ 287 (328)
.+..++||++.++++|++.+.+. |++|+++++|++|..+ ++.+. |++ +|++++||+||+++++
T Consensus 197 ~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 197 YFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVT-VKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp EEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCEE-EEETTSCEEEESEEEECSCH
T ss_pred eeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcEE-EEECCCCEEEcCEEEEecCH
Confidence 23344799999999998876654 7899999999999998 66655 666 7778999999988764
No 29
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.62 E-value=2.6e-14 Score=136.74 Aligned_cols=73 Identities=16% Similarity=0.182 Sum_probs=59.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (328)
.+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.+. ..++.+|+|..++...
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~-------------------~~G~~vd~Ga~~i~G~ 396 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKS-------------------FKGVTVGRGAQIVNGC 396 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECC-------------------STTCCEESSCCEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccc-------------------cCCeEeccCCeEEeCC
Confidence 479999999999999999999999999999999999999988752 1467889999998643
Q ss_pred --chHHHHHHhcCC
Q 020312 84 --GALVRVLIHTDV 95 (328)
Q Consensus 84 --~~~~~~~~~~~~ 95 (328)
+++.....+.++
T Consensus 397 ~~np~~~l~~~lGl 410 (776)
T 4gut_A 397 INNPVALMCEQLGI 410 (776)
T ss_dssp TTCHHHHHHHHHTC
T ss_pred ccChHHHHHHHhCC
Confidence 344444444444
No 30
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.61 E-value=1.1e-14 Score=131.75 Aligned_cols=60 Identities=13% Similarity=0.183 Sum_probs=51.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCc---ceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNK---PECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~---~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~~~ 292 (328)
..++++|.+.++++|++|++++ +|++|..+ ++++++|++ ++++++||.||++++.+...+
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGGGGT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCChhhh
Confidence 5688999999999999999999 99999998 888888888 566899999998887655443
No 31
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.60 E-value=1.4e-14 Score=126.81 Aligned_cols=82 Identities=9% Similarity=0.067 Sum_probs=59.9
Q ss_pred eEEeecCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCC------Cc---c--
Q 020312 223 PYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY------LP---N-- 290 (328)
Q Consensus 223 ~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~------~~---~-- 290 (328)
..+...+|++.+++++++. .|++|+++++|++|..+ ++.+. |++ +|+.++||.||++++. ++ +
T Consensus 103 ~~~~~~~g~~~l~~~l~~~---~g~~i~~~~~V~~i~~~-~~~~~-v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 103 CNFVAPQGISSIIKHYLKE---SGAEVYFRHRVTQINLR-DDKWE-VSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp EEEECTTCTTHHHHHHHHH---HTCEEESSCCEEEEEEC-SSSEE-EEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred cceecCCCHHHHHHHHHHh---cCCEEEeCCEEEEEEEc-CCEEE-EEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 3456678999999998754 38999999999999998 66654 555 6777999999987653 11 1
Q ss_pred --hh----hh-hccceeEEeeeehhh
Q 020312 291 --KV----II-IMLIGFILIFLVRRI 309 (328)
Q Consensus 291 --~~----~~-~~~~~~~~~~~~~~~ 309 (328)
.. .. ...+.+++++++++.
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~ 203 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAG 203 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSC
T ss_pred CHHHHHHHhcCCccccEEEEEEECCC
Confidence 11 11 566778888888753
No 32
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.59 E-value=3.9e-15 Score=131.46 Aligned_cols=60 Identities=10% Similarity=0.093 Sum_probs=48.6
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cC--ceEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG--ETAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g--~~~~ad~vV~~~~~~~~~~ 292 (328)
..++++|.+.++++|++|+++++|++|..+ ++..+.|++ +| .+++||.||++++.++.++
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l 212 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVR-PEGGFELDFGGAEPMTLSCRVLINAAGLHAPGL 212 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-TTSSEEEEECTTSCEEEEEEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEc-CCceEEEEECCCceeEEEeCEEEECCCcchHHH
Confidence 568899999999999999999999999998 555344666 55 3799999999888765544
No 33
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.58 E-value=1.7e-14 Score=128.05 Aligned_cols=59 Identities=14% Similarity=0.147 Sum_probs=49.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~~~ 292 (328)
..++++|++.++++|++|+++++|++|..+ ++. +.|++++++++||+||++++.+...+
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~g~i~a~~VV~A~G~~s~~l 212 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGA-WEVRCDAGSYRAAVLVNAAGAWCDAI 212 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTE-EEEECSSEEEEESEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCe-EEEEeCCCEEEcCEEEECCChhHHHH
Confidence 568999999999999999999999999987 665 67888555999999999888765544
No 34
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.56 E-value=1.2e-14 Score=136.38 Aligned_cols=79 Identities=13% Similarity=0.036 Sum_probs=59.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCC--------CeEEEeccCC-CC----------------CCcccccchHHHHhhhcCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDG--------LKVLHMDRND-YY----------------GGESSSLNLIQLWKRFRGN 58 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G--------~~V~vlE~~~-~~----------------GG~~~s~~~~~~~~~~~~~ 58 (328)
..+|+|||||++||+||++|+++| ++|+|+|+++ ++ ||++.+..... +.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~---~~--- 129 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHN---GD--- 129 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECS---SC---
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccC---Cc---
Confidence 478999999999999999999999 9999999999 99 99998875410 00
Q ss_pred CCCCCccCCCCCeEEecCcceEecCchH-HHHHHhc-CC
Q 020312 59 EQPPAHLGSSRDYNVDMIPKFIIANGAL-VRVLIHT-DV 95 (328)
Q Consensus 59 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~-~~ 95 (328)
....++.+++|++++...... .+.+.+. ++
T Consensus 130 -------~~~~~~~~e~G~~~~~~~~~~~~~~~~~l~gl 161 (721)
T 3ayj_A 130 -------PASGDTIYEVGAMRFPEIAGLTWHYASAAFGD 161 (721)
T ss_dssp -------GGGCSEEEECSCCCEETTCHHHHHHHHHHHCT
T ss_pred -------ccCCCcEEecCCEEecCccHHHHHHHHHhcCC
Confidence 001468899999998866433 3333344 44
No 35
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.55 E-value=4.5e-13 Score=129.06 Aligned_cols=60 Identities=20% Similarity=0.338 Sum_probs=54.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (328)
.+||+|||||++||+||++|+++|++|+|||+++++||++.+++. .++..|+|++++...
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~--------------------~~~~~~~G~~~~~~~ 337 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK--------------------GNYVADLGAMVVTGL 337 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEE--------------------TTEEEESSCCEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecc--------------------cccchhcCceEecCC
Confidence 479999999999999999999999999999999999999988754 468899999998653
No 36
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.54 E-value=3.3e-13 Score=127.95 Aligned_cols=60 Identities=20% Similarity=0.338 Sum_probs=54.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (328)
.+||+|||||++||+||++|+++|++|+|+|+++++||++.+.+. .++..|+|++++...
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~--------------------~~~~~~~G~~~~~~~ 166 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK--------------------GNYVADLGAMVVTGL 166 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEE--------------------TTEEEESSCCEECCS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc--------------------cCchhhcCcEEEeCC
Confidence 489999999999999999999999999999999999999988753 468889999998653
No 37
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.54 E-value=1.4e-14 Score=128.61 Aligned_cols=60 Identities=20% Similarity=0.184 Sum_probs=51.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~~~ 292 (328)
..+++.|.+.++++|++++++++|++|..+ ++.+++|++++++++||.||.+++..+..+
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g~i~a~~VV~A~G~~s~~l 208 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKGIIKTGIVVNATNAWANLI 208 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTEEEECSEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCcEEECCEEEECcchhHHHH
Confidence 568888999999999999999999999988 788887888555899999999888766544
No 38
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.52 E-value=1.5e-13 Score=122.88 Aligned_cols=61 Identities=13% Similarity=0.033 Sum_probs=48.2
Q ss_pred eecCCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCC
Q 020312 226 YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL 288 (328)
Q Consensus 226 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~ 288 (328)
++......+.+.|.+.+++.|++++++++|++|..+ ++. +.|++++++++||.||.+.+..
T Consensus 126 ~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~-~~~-~~V~~~~g~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 126 FCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT-ASG-FRVTTSAGTVDAASLVVASGGK 186 (417)
T ss_dssp EESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETTEEEEESEEEECCCCS
T ss_pred eeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECCcEEEeeEEEECCCCc
Confidence 344444678889999999999999999999999987 554 5577754599999999876654
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.51 E-value=6.4e-13 Score=126.54 Aligned_cols=58 Identities=12% Similarity=-0.008 Sum_probs=48.8
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcch
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPNK 291 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~~ 291 (328)
..++++|.+.+++.|++|+++++|++|..+ +++ +.|++ +++++.||.||++.+.....
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~G~~i~Ad~VVlAtG~~s~~ 475 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDC-WLLNFAGDQQATHSVVVLANGHQISR 475 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCGGGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCe-EEEEECCCCEEECCEEEECCCcchhc
Confidence 568899999999999999999999999998 666 46777 67789999999887765443
No 40
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.50 E-value=5.3e-13 Score=119.14 Aligned_cols=58 Identities=22% Similarity=0.159 Sum_probs=47.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcch
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNK 291 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~~ 291 (328)
..+++.|.+.+++.|++|+++++|++|+.+ ++.+ .|++++++++||.||.+.+.++..
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v-~v~t~~g~i~a~~VV~A~G~~s~~ 210 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPD-ADGV-SVTTDRGTYRAGKVVLACGPYTND 210 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEESSCEEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeE-EEEECCCEEEcCEEEEcCCcChHH
Confidence 467888989899999999999999999987 6654 466666689999999888765443
No 41
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.49 E-value=2.5e-13 Score=125.11 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe--cCc--eEEcC-EEEECCCCC
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGE--TAKCK-KVVCDPSYL 288 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~--~g~--~~~ad-~vV~~~~~~ 288 (328)
.+.+.|.+.++++|++|+++++|++|..++++++++|+. +++ ++.|| .||++++-+
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 789999999999999999999999999874688888876 333 58996 788766543
No 42
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.48 E-value=3.6e-13 Score=131.05 Aligned_cols=60 Identities=20% Similarity=0.238 Sum_probs=51.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~~~ 292 (328)
..++++|++.++++|++|+++++|++|..+ ++++++|++++++++||.||++++.+...+
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G~i~Ad~VV~AaG~~s~~l 210 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADGVIPADIVVSCAGFWGAKI 210 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTEEEECSEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCcEEECCEEEECCccchHHH
Confidence 468899999999999999999999999987 788888888666899999999887765443
No 43
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.47 E-value=1e-12 Score=125.26 Aligned_cols=57 Identities=12% Similarity=0.082 Sum_probs=46.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCc-eEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE-TAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~-~~~ad~vV~~~~~~~~ 290 (328)
..++++|.+.+++.|++|+++++|++|+.+ +++ +.|++ +|+ +++||.||++++....
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRI-DSQ-WQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEC-SSS-EEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEe-CCe-EEEEeCCCcEEEECCEEEECCCcchh
Confidence 568999999999999999999999999998 666 45666 556 8999999988776543
No 44
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.46 E-value=7.8e-13 Score=115.22 Aligned_cols=44 Identities=25% Similarity=0.362 Sum_probs=41.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN 47 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~ 47 (328)
++||+|||||++|+++|+.|+++|.+|+|||+++.+||++.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~ 45 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR 45 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe
Confidence 47999999999999999999999999999999999999887764
No 45
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.45 E-value=2.7e-12 Score=114.72 Aligned_cols=68 Identities=24% Similarity=0.177 Sum_probs=54.1
Q ss_pred EEeecCCc---CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcchh
Q 020312 224 YIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 224 ~~~~~gG~---~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~~~ 292 (328)
.+++.+|. ..+++.|.+.+++.|++++++++|++|..+ ++++++|+++++++.||.||.+.+..+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~a~~vV~a~G~~s~~l 233 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRGTIHAGKVALAGAGHSSVL 233 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTCCEEEEEEEECCGGGHHHH
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCceEECCEEEECCchhHHHH
Confidence 34444443 368888999999999999999999999988 778888888544899999998888765443
No 46
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.44 E-value=1.4e-12 Score=118.11 Aligned_cols=58 Identities=19% Similarity=0.192 Sum_probs=49.0
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCc
Q 020312 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (328)
Q Consensus 231 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~ 289 (328)
...+.+.|.+.+++.|++|+++++|++|..+ ++++++|++ ++++++||.||.+.+..+
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 3568889999999999999999999999987 788788888 666799999998766544
No 47
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.43 E-value=8.5e-13 Score=122.68 Aligned_cols=61 Identities=23% Similarity=0.261 Sum_probs=51.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-c---C--ceEEcCEEEECCCCCcchhh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E---G--ETAKCKKVVCDPSYLPNKVI 293 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~---g--~~~~ad~vV~~~~~~~~~~~ 293 (328)
..++.++++.++++|++|+++++|++|..+ ++++++|++ + + ..++||.||.+++.+...+.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~ 236 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLR 236 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHH
Confidence 568899999999999999999999999998 888888876 2 3 46899999999888765554
No 48
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.42 E-value=2.1e-12 Score=115.16 Aligned_cols=43 Identities=21% Similarity=0.277 Sum_probs=39.9
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
||+++||+|||||++|++||+.|+++|.+|+|+|+++.+|+..
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~ 43 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhc
Confidence 7778999999999999999999999999999999999887654
No 49
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.41 E-value=2.7e-13 Score=114.79 Aligned_cols=63 Identities=22% Similarity=0.288 Sum_probs=54.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccccchHHHHhhhcCCCCCCCccCCCCCeEEecCcceEecC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (328)
++||+|||||++||+||+.|+++|++|+||||++.+||++++.+. .+..+|+|.+++...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~--------------------~~~~~d~g~~~~~~~ 61 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRS--------------------DAGALDMGAQYFTAR 61 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEE--------------------TTEEEECSCCCBCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccccccc--------------------CCceeecCccccccC
Confidence 489999999999999999999999999999999999999988764 357788888777655
Q ss_pred chH
Q 020312 84 GAL 86 (328)
Q Consensus 84 ~~~ 86 (328)
...
T Consensus 62 ~~~ 64 (336)
T 3kkj_A 62 DRR 64 (336)
T ss_dssp SHH
T ss_pred cHH
Confidence 443
No 50
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.41 E-value=3.1e-12 Score=113.08 Aligned_cols=57 Identities=14% Similarity=0.194 Sum_probs=46.5
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
..+++.|.+.+++.|++++++++|++|+.+ ++. +.|++++++++||.||.+++.+..
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~-~~v~~~~g~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHD-DDG-VTIETADGEYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSS-EEEEESSCEEEEEEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEc-CCE-EEEEECCCeEEcCEEEEcCCccHH
Confidence 468899999999999999999999999987 555 456675557999999988776544
No 51
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.39 E-value=8.6e-12 Score=110.86 Aligned_cols=59 Identities=10% Similarity=0.179 Sum_probs=48.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~~~ 292 (328)
..+++.|.+.++++|++++++++|++|+.+ ++. +.|++++++++||.||.+++..+..+
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~-~~v~~~~g~~~a~~vV~A~G~~~~~l 208 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS-PDS-VKIETANGSYTADKLIVSMGAWNSKL 208 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSC-EEEEETTEEEEEEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec-CCe-EEEEeCCCEEEeCEEEEecCccHHHH
Confidence 578899999999999999999999999987 555 34667666899999999888765443
No 52
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.37 E-value=8.6e-12 Score=113.08 Aligned_cols=60 Identities=15% Similarity=0.236 Sum_probs=49.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEe---------------cCCCcEEEEEecCceE--EcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEF---------------DEEGKVVGVTSEGETA--KCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~---------------~~~~~v~~v~~~g~~~--~ad~vV~~~~~~~~~~ 292 (328)
..+++.|.+.++++|++|+++++|++|.. + ++++++|+++++++ .||.||++++.+..++
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~-~~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~~l 257 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ-EARASAAVLSDGTRVEVGEKLVVAAGVWSNRL 257 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS-CEEEEEEEETTSCEEEEEEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC-CCceEEEEeCCCEEeecCCEEEECCCcCHHHH
Confidence 46889999999999999999999999998 5 66777888854478 9999999888765544
No 53
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.36 E-value=4.7e-12 Score=117.95 Aligned_cols=60 Identities=20% Similarity=0.216 Sum_probs=49.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe----cCc--eEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~----~g~--~~~ad~vV~~~~~~~~~~ 292 (328)
..++..+++.++++|++|+++++|++|..+ ++++++|++ +++ +++||.||.+++.+...+
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l 253 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKV 253 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHH
Confidence 457888888899999999999999999998 778877774 343 699999999888765544
No 54
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.36 E-value=1.3e-12 Score=115.91 Aligned_cols=59 Identities=14% Similarity=0.145 Sum_probs=48.6
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~~~ 292 (328)
..+.+.|.+.+++.|++++++++|++|..+ ++.+ .|++++++++||.||.+.+..+..+
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g~~~a~~vV~A~G~~s~~l 222 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSGDVWANHVVVASGVWSGMF 222 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTEEEEEEEEEECCGGGTHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCceEEcCEEEECCChhHHHH
Confidence 458889999999999999999999999987 6666 6777555899999998887765533
No 55
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.34 E-value=3e-12 Score=119.38 Aligned_cols=56 Identities=20% Similarity=0.168 Sum_probs=46.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCC-CcEEEEEe---cCc--eEEcCEEEECCCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS---EGE--TAKCKKVVCDPSYL 288 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-~~v~~v~~---~g~--~~~ad~vV~~~~~~ 288 (328)
..+.+.|.+.+++.|++|+++++|++|..+ + +++++|+. +++ ++.||.||++.+-.
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVN-DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEEC-TTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEC-CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 458889999999999999999999999998 6 88887765 454 58999988766553
No 56
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.34 E-value=4.2e-11 Score=111.76 Aligned_cols=57 Identities=16% Similarity=0.107 Sum_probs=46.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe---cCc--eEEcCEEEECCCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCDPSYL 288 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~---~g~--~~~ad~vV~~~~~~ 288 (328)
..+.+.|.+.+++.|++|+++++|++|..++++++++|+. +++ ++.||.||++.+-.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 4688889999999999999999999999882388887765 454 68999998776553
No 57
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.32 E-value=1.1e-11 Score=110.56 Aligned_cols=56 Identities=23% Similarity=0.323 Sum_probs=45.3
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe----cCceEEcCEEEECCCCCc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCDPSYLP 289 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~----~g~~~~ad~vV~~~~~~~ 289 (328)
.+.+.|.+.+++.|++++++++|++|..+ ++.+++|++ ++.+++||.||.+.+..+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 45666777788889999999999999998 888776765 345799999998877654
No 58
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.31 E-value=9.4e-12 Score=114.48 Aligned_cols=58 Identities=19% Similarity=0.280 Sum_probs=50.5
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.|.+.+++.|++|+++++|++|..+ ++++++|++ +++++.||.||++.+..+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 457777888888899999999999999998 788888888 6778999999999888775
No 59
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.27 E-value=4e-11 Score=111.95 Aligned_cols=56 Identities=20% Similarity=0.162 Sum_probs=44.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe----cCc--eEEcCEEEECCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSY 287 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~----~g~--~~~ad~vV~~~~~ 287 (328)
..+.+.|.+.+++.|++|+++++|++|..++++++++|.. +++ .+.||.||++.+-
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 4688889998889999999999999999853577877764 344 5899998876554
No 60
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.26 E-value=2.5e-11 Score=111.47 Aligned_cols=59 Identities=14% Similarity=0.136 Sum_probs=48.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe----cCc--eEEcCEEEECCCCCcchh
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYLPNKV 292 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~----~g~--~~~ad~vV~~~~~~~~~~ 292 (328)
..++.++++.++++|++++++++|++|..+ + ++++|++ +|+ +++||.||.+++.+...+
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l 213 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQF 213 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHH
Confidence 568899999999999999999999999987 5 5667765 454 799999999888765543
No 61
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.25 E-value=2.1e-11 Score=109.62 Aligned_cols=57 Identities=12% Similarity=0.165 Sum_probs=43.1
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCc--eEEcCEEEECCCCCc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE--TAKCKKVVCDPSYLP 289 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~--~~~ad~vV~~~~~~~ 289 (328)
.+.+.|.+.+++.|++++++++|++|..++++..+.+++ +|+ +++||.||.+.+..+
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 456667777888899999999999999873333455555 666 699999998776543
No 62
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.23 E-value=7.4e-11 Score=110.40 Aligned_cols=55 Identities=18% Similarity=0.270 Sum_probs=45.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe----cCc--eEEcCEEEECCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSY 287 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~----~g~--~~~ad~vV~~~~~ 287 (328)
..+.+.|.+.+++.|++|+++++|++|..+ ++++.+|.. +++ .+.|+.||++++-
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 468889988888899999999999999988 788888765 344 5899998876554
No 63
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.22 E-value=6.6e-10 Score=103.59 Aligned_cols=56 Identities=23% Similarity=0.204 Sum_probs=45.6
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCC-CcEEEEEe---cCc--eEEcCEEEECCCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS---EGE--TAKCKKVVCDPSYL 288 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-~~v~~v~~---~g~--~~~ad~vV~~~~~~ 288 (328)
..+.+.|.+.+++.|++|+++++|++|..+ + +++++|+. +++ .+.||.||++.+-.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~-~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILED-ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEEC-CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 468888999999999999999999999988 6 88888765 343 58999999776643
No 64
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.21 E-value=8.7e-11 Score=99.81 Aligned_cols=41 Identities=24% Similarity=0.333 Sum_probs=37.4
Q ss_pred CcccEEEECCChhHHHHHHhhhhC-CCeEEEeccCCCCCCcc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGGES 43 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~-G~~V~vlE~~~~~GG~~ 43 (328)
.++||+|||||++|++||+.|+++ |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 357999999999999999999997 99999999999888753
No 65
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.19 E-value=2.3e-10 Score=106.63 Aligned_cols=56 Identities=18% Similarity=0.105 Sum_probs=44.9
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe--cC--ceEEcCEEEECCCCCc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EG--ETAKCKKVVCDPSYLP 289 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~--~g--~~~~ad~vV~~~~~~~ 289 (328)
.+.+.|.+.+++.|++++++++|++|..+ ++.+++|++ +| .+++||.||.+.+..+
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 46667777888899999999999999987 666677766 45 4799999998877644
No 66
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.17 E-value=2.3e-10 Score=107.86 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=45.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe----cCc--eEEcCEEEECCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSY 287 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~----~g~--~~~ad~vV~~~~~ 287 (328)
..+...|.+.+++.|++|+.+++|++|..+ ++++.+|.. +++ .+.||.||++++-
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 468889999888899999999999999987 788887764 344 4899998876554
No 67
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.13 E-value=2.3e-10 Score=102.63 Aligned_cols=58 Identities=19% Similarity=0.185 Sum_probs=50.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++++.+|++ +|+++.||.||++++..|+
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 456777788889999999999999999987 788888888 7889999999999988665
No 68
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.13 E-value=6.2e-10 Score=102.04 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=36.3
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
+++++||+|||||++||++|+.|+++|.+|+|||+.+.++.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 35679999999999999999999999999999999876643
No 69
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.12 E-value=3e-10 Score=101.32 Aligned_cols=58 Identities=14% Similarity=0.057 Sum_probs=46.7
Q ss_pred CcHHHHHHHHHHHc-CcEEEcCcceeEEEecCCCcEE-EEEe-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVV-GVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~-~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.|.+.+++. |++++++++|++|+.+ ++.++ .|++ +|++++||.||.+.+..+.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRD-ERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc-CCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 45778888888888 9999999999999988 66653 5666 6778999999988776554
No 70
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.12 E-value=2.8e-10 Score=101.81 Aligned_cols=53 Identities=17% Similarity=0.153 Sum_probs=41.5
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~ 288 (328)
..+.+.|.+.+++ ++|+++++|++|+.+ ++.+. |++ +|++++||.||.+.+..
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v~-v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEED-ADGVT-VWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEE-TTEEE-EEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEec-CCcEE-EEEcCCCEEeeCEEEECCCcC
Confidence 3566777777665 899999999999988 66644 555 78899999999877664
No 71
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.11 E-value=6.4e-10 Score=103.04 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=44.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCC----cEEEEEecC---ceEEcCEEEECCCCCc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEG----KVVGVTSEG---ETAKCKKVVCDPSYLP 289 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~----~v~~v~~~g---~~~~ad~vV~~~~~~~ 289 (328)
..+.+.|.+.+++.|++++++++|++|+.+ ++ .++....++ .+++||.||.+.+..+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQH-DDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE-CGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEC-CCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 457778888888899999999999999998 55 444333344 6799999998877654
No 72
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.10 E-value=3.3e-10 Score=104.73 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=34.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
++||+|||||++||+||+.|++ |.+|+||||.+..||.+
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 5899999999999999999999 99999999998877654
No 73
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.10 E-value=3.8e-10 Score=103.94 Aligned_cols=57 Identities=21% Similarity=0.191 Sum_probs=45.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe---cCc--eEEcCEEEECCCCCc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCDPSYLP 289 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~---~g~--~~~ad~vV~~~~~~~ 289 (328)
..+.+.|.+.+++.|++++++++|++|..+ ++++++|++ +|+ +++||.||.+.+..+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 356777888888899999999999999998 788776664 453 799999998776643
No 74
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.09 E-value=4.3e-10 Score=102.04 Aligned_cols=54 Identities=24% Similarity=0.168 Sum_probs=42.7
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe----cCc--eEEcCEEEECCCC
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSY 287 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~----~g~--~~~ad~vV~~~~~ 287 (328)
.+.+.|.+.+++.|++++++++|++|..+ ++.+++|++ +|+ +++||.||.+.+.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~ 160 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGY 160 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGG
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCC
Confidence 35566777778889999999999999988 777766654 444 7999999977665
No 75
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.09 E-value=1.1e-09 Score=101.49 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=45.5
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~ 288 (328)
..+.+.|.+.+++.|++++.+ +|++|..++++.++.|++ +|++++||.||.+.+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCc
Confidence 457788888888899999999 899999864556677777 66689999999876653
No 76
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.08 E-value=1.2e-10 Score=108.87 Aligned_cols=55 Identities=16% Similarity=0.168 Sum_probs=44.7
Q ss_pred CcHHHHHHHHHHHcC-cEEEcCcceeEEEecCCCcEEEEEe----cCc--eEEcCEEEECCCC
Q 020312 232 GELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSY 287 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~~~v~~v~~----~g~--~~~ad~vV~~~~~ 287 (328)
..+.+.|.+.+++.| ++|+++++|++|..+ ++++++|.. +|+ .+.||.||++.+-
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 467888888888888 999999999999998 788777653 455 6899998876654
No 77
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.07 E-value=5.6e-11 Score=105.60 Aligned_cols=40 Identities=30% Similarity=0.449 Sum_probs=37.2
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
|++|||+|||||++||+||+.|+++|++|+|+||++.+|.
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 4579999999999999999999999999999999887765
No 78
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.07 E-value=1.3e-09 Score=101.79 Aligned_cols=57 Identities=16% Similarity=0.232 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEec----------------CceEEcCEEEECCCCCc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSE----------------GETAKCKKVVCDPSYLP 289 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~----------------g~~~~ad~vV~~~~~~~ 289 (328)
.+.+.|.+.+++.|++|+++++|++|..++++.+++|.+. +.+++||.||.+.+..+
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 5667777888889999999999999998744678777763 25799999998877654
No 79
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.06 E-value=1e-09 Score=101.64 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
++||+|||||++|+++|..|++.|.+|+|+|+++.+||..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw 60 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVW 60 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 5899999999999999999999999999999999999854
No 80
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.05 E-value=2.5e-09 Score=98.03 Aligned_cols=38 Identities=26% Similarity=0.453 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
+++||+|||||++||++|..|+++|.+|+|||+.+.++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 46899999999999999999999999999999987654
No 81
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.05 E-value=1.2e-09 Score=97.69 Aligned_cols=58 Identities=22% Similarity=0.331 Sum_probs=50.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++++.+|++ +|+++.||.||++++..|+
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 457777888889999999999999999987 788888887 7889999999999887655
No 82
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.03 E-value=5.2e-10 Score=104.04 Aligned_cols=57 Identities=11% Similarity=-0.009 Sum_probs=43.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEE-e-cC-ceEEcCEEEECCCCCc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-S-EG-ETAKCKKVVCDPSYLP 289 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~-~-~g-~~~~ad~vV~~~~~~~ 289 (328)
..+.+.|.+.+++.|++|+++++|++|+.+ ++.++... . +| ++++||.||.+-+..+
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~-~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQD-AEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBC-SSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 346777778888889999999999999988 55544322 2 55 5899999998776543
No 83
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.03 E-value=1e-09 Score=101.32 Aligned_cols=40 Identities=28% Similarity=0.371 Sum_probs=37.6
Q ss_pred cccEEEECCChhHHHHHHhhh-hCCCeEEEeccCCCCCCcc
Q 020312 4 EYDVIVLGTGLKECILSGLLS-VDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~-~~G~~V~vlE~~~~~GG~~ 43 (328)
++||+|||||++|+++|+.|+ +.|.+|+|+|+++.+||..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw 48 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTW 48 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcc
Confidence 489999999999999999999 9999999999999999854
No 84
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.01 E-value=7.5e-10 Score=102.69 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHhhhhC-CCeEEEeccCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRND 37 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~-G~~V~vlE~~~ 37 (328)
++||+||||||.+|+++|.+|++. |.+|+|||+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 79999999976
No 85
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.00 E-value=5e-09 Score=98.91 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=43.0
Q ss_pred CcHHHHHHHHHHHc-Cc-EEEcCcceeEEEecCCC---cEEEEEe----cCc--eEEcCEEEECCC
Q 020312 232 GELPQAFARLSAVY-GG-TYMLNKPECKVEFDEEG---KVVGVTS----EGE--TAKCKKVVCDPS 286 (328)
Q Consensus 232 ~~l~~~l~~~~~~~-G~-~i~~~~~V~~I~~~~~~---~v~~v~~----~g~--~~~ad~vV~~~~ 286 (328)
..+...+.+.+++. |+ +|+++++|++|..+ ++ ++++|.. +++ .+.|+.||++.+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtG 215 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSVREPKFYVFKAKAVILATG 215 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEecCCcEEEEEcCEEEECCC
Confidence 45777888888887 99 99999999999987 56 8888763 444 589999887554
No 86
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.00 E-value=4.3e-09 Score=95.78 Aligned_cols=55 Identities=18% Similarity=0.262 Sum_probs=43.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe--cCceEEcCEEEECCCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGETAKCKKVVCDPSYL 288 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~--~g~~~~ad~vV~~~~~~ 288 (328)
..+.+.|.+.+++.|++++++++| +|..+ ++++.++.. +++.+.||.||.+.+-.
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCC
Confidence 457788888888889999999999 99988 788877765 34468899998776543
No 87
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.00 E-value=1.5e-09 Score=100.27 Aligned_cols=36 Identities=22% Similarity=0.423 Sum_probs=32.1
Q ss_pred CcccEEEECCChhHHHHHHhhhh-CCCeEEEeccCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDY 38 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~-~G~~V~vlE~~~~ 38 (328)
++||+||||||.+|+.+|.+|++ .|++|+|||++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 46999999999999999999998 6799999999643
No 88
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.99 E-value=8e-09 Score=95.92 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=46.5
Q ss_pred CcHHHHHHHHHHHc-CcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCc
Q 020312 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (328)
Q Consensus 232 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~ 289 (328)
..+.+.|.+.+++. |++++++ +|++|..++++.+++|++ +|++++||.||.+.+..+
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 35788888888888 9999999 999999864566777877 677899999998776533
No 89
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.98 E-value=2.4e-10 Score=99.10 Aligned_cols=42 Identities=26% Similarity=0.271 Sum_probs=38.5
Q ss_pred cccEEEECCChhHHHHHHhhhh--CCCeEEEeccCCCCCCcccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSV--DGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~--~G~~V~vlE~~~~~GG~~~s 45 (328)
++||+|||||++||+||++|++ +|++|+|+|+++.+||.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 5899999999999999999985 59999999999999997754
No 90
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.97 E-value=6.7e-09 Score=94.65 Aligned_cols=58 Identities=19% Similarity=0.174 Sum_probs=47.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++++..+..+++++.||.||++++..|+
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 456777888889999999999999999986 6776533347889999999999887654
No 91
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.96 E-value=1.9e-09 Score=97.73 Aligned_cols=57 Identities=7% Similarity=0.117 Sum_probs=46.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++++ .|+++++++.||.||++++..|+
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQEISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSCEEEESEEEECSCCBCC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCCEEEeCEEEECcCCCCC
Confidence 346777888889999999999999999976 6666 66675559999999998887554
No 92
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.94 E-value=3.7e-09 Score=97.94 Aligned_cols=54 Identities=17% Similarity=0.160 Sum_probs=44.1
Q ss_pred cHHHHHHHHHHH-cCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC
Q 020312 233 ELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (328)
Q Consensus 233 ~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~ 288 (328)
.+.+.+.+.+++ .|+++ ++++|++|..+ ++++++|.+ +|..+.||.||++.+..
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 466777777777 59999 57899999988 888888988 77789999999877653
No 93
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.93 E-value=5.3e-10 Score=96.26 Aligned_cols=43 Identities=26% Similarity=0.481 Sum_probs=37.0
Q ss_pred CCC-cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDE-EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~-~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|.+ +|||+|||||++|++||.+|+++|++|+|+|+. .+||.+.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 554 699999999999999999999999999999984 6777664
No 94
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.92 E-value=1.7e-08 Score=93.81 Aligned_cols=54 Identities=17% Similarity=0.108 Sum_probs=43.7
Q ss_pred cHHHHHHHHHHH-cCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC
Q 020312 233 ELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (328)
Q Consensus 233 ~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~ 288 (328)
.+.+.+.+.+++ .|+++ ++++|++|..+ ++++++|.+ +|..+.||.||.+.+..
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 466777777777 69999 57899999988 788888888 67789999999876653
No 95
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.92 E-value=6.2e-10 Score=95.48 Aligned_cols=40 Identities=20% Similarity=0.157 Sum_probs=34.7
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
|++|||+|||||++||+||++|+++|++|+|+|++. +||.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~ 43 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNR 43 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCe
Confidence 668999999999999999999999999999999965 4553
No 96
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.92 E-value=3.6e-09 Score=94.67 Aligned_cols=56 Identities=11% Similarity=0.044 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ + ++..|++ +|+++.||.||++++..|+
T Consensus 186 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 186 RIGAWLRGLLTELGVQVELGTGVVGFSGE-G-QLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEECS-S-SCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEecc-C-cEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 45667777888999999999999999865 3 5566777 8889999999999888665
No 97
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.89 E-value=6.8e-08 Score=86.87 Aligned_cols=57 Identities=21% Similarity=0.338 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEe--cCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEF--DEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~--~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|.. + ++++..|++ +|+++.||.||++++..|+
T Consensus 192 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 192 PVSAFYEHLHREAGVDIRTGTQVCGFEMSTD-QQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECTT-TCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEeccC-CCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 4667777888899999999999999997 5 677777777 7788999999998887654
No 98
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.89 E-value=3e-09 Score=98.29 Aligned_cols=38 Identities=32% Similarity=0.538 Sum_probs=34.1
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+||+||||||.+|+++|.+|++ |.+|+|||++...++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 35999999999999999999999 999999999766543
No 99
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.88 E-value=1.2e-08 Score=93.55 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=35.1
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
.++|++|||+|.+|+++|.+|++.|.+|+|||++...+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 46999999999999999999999999999999987654
No 100
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.88 E-value=1.1e-08 Score=94.04 Aligned_cols=37 Identities=14% Similarity=0.269 Sum_probs=34.1
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
+.++|++|||||.+|+++|.+|++.|.+|+|||++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4569999999999999999999999999999999754
No 101
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.87 E-value=1.6e-09 Score=95.28 Aligned_cols=41 Identities=24% Similarity=0.260 Sum_probs=36.6
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
|..++||+|||||++|+++|++|+++|.+|+|||+....+|
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 44579999999999999999999999999999999875444
No 102
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.86 E-value=1.1e-09 Score=94.14 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=34.9
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
|.+.|||+|||||++||+||.+|+++|++|+|+|+...
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 77779999999999999999999999999999999764
No 103
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.84 E-value=8.3e-09 Score=93.51 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=48.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++++..+.++++++.||.||++++..|+
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 346777888889999999999999999975 6677667778889999999998877554
No 104
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.81 E-value=1.6e-09 Score=98.58 Aligned_cols=45 Identities=29% Similarity=0.324 Sum_probs=41.1
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
|+.++||+|||||++|++||..|+++|++|+|+|+++.+||.+..
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 677899999999999999999999999999999999999997653
No 105
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.78 E-value=2.7e-09 Score=97.80 Aligned_cols=44 Identities=27% Similarity=0.444 Sum_probs=38.7
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
+.++||+|||||++|++||..|+++|++|+|+|+++.+||.+..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~ 66 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLN 66 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 34699999999999999999999999999999999999997543
No 106
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.78 E-value=2.7e-09 Score=93.67 Aligned_cols=44 Identities=11% Similarity=0.212 Sum_probs=39.3
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|+..+||+|||||++|++||+.|+++|++|+|+|+++.+||.+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 54 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA 54 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc
Confidence 45578999999999999999999999999999999999998654
No 107
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.78 E-value=1.4e-08 Score=93.93 Aligned_cols=38 Identities=26% Similarity=0.353 Sum_probs=34.3
Q ss_pred CcccEEEECCChhHHHHHHhhhhC-CCeEEEeccCCCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYG 40 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~-G~~V~vlE~~~~~G 40 (328)
.++|++|||||.+|+++|++|+++ |.+|+|||++....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 359999999999999999999998 89999999976543
No 108
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.78 E-value=4.5e-09 Score=94.05 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=35.7
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCe-EEEeccCCCCCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLK-VLHMDRNDYYGG 41 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~-V~vlE~~~~~GG 41 (328)
|+.++||+|||||++||++|..|+++|.+ |+|+|+++.++.
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~ 42 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP 42 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc
Confidence 77889999999999999999999999999 999999887654
No 109
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.77 E-value=3e-09 Score=92.36 Aligned_cols=44 Identities=20% Similarity=0.323 Sum_probs=39.5
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|++++||+|||||++|++||++|+++|++|+|+|+++.+||.+.
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 45 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLT 45 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHH
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 34569999999999999999999999999999999999998653
No 110
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.73 E-value=6.5e-09 Score=89.66 Aligned_cols=43 Identities=21% Similarity=0.448 Sum_probs=37.5
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|+.++||+|||||++|++||+.|+++|++|+|+|+ ..+||.+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 45568999999999999999999999999999999 56777654
No 111
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.72 E-value=4.7e-09 Score=95.41 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=45.7
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEE-e-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-S-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~-~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++..+.|+ + +|+ +.||.||++++..|+
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSAD-ADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-TTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEc-CCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 346778888899999999999999999987 45445677 6 565 999999998877544
No 112
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.72 E-value=7e-09 Score=90.66 Aligned_cols=42 Identities=26% Similarity=0.374 Sum_probs=39.1
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
+++||+|||||++|+++|..|+++|++|+|+|+++.+||...
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~ 43 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ 43 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 468999999999999999999999999999999999998754
No 113
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.72 E-value=1e-08 Score=91.36 Aligned_cols=40 Identities=20% Similarity=0.337 Sum_probs=36.3
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
+.++||+|||||++||++|..|+++|.+|+|+|+++.++.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 4568999999999999999999999999999999876654
No 114
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.72 E-value=8.3e-09 Score=88.81 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=37.7
Q ss_pred cccEEEECCChhHHHHHHhhhhC--CCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++||+||++|+++ |++|+|+|++..+||.+.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 58999999999999999999997 999999999998887543
No 115
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.72 E-value=5e-09 Score=95.82 Aligned_cols=56 Identities=20% Similarity=0.245 Sum_probs=46.0
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++.+ .|++ +++++.||.||++++..|.
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-NVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-EEEECCCcEEEcCEEEEeeCCCcC
Confidence 46777888888999999999999999987 6665 5555 7778999999998877544
No 116
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.72 E-value=3.3e-08 Score=92.28 Aligned_cols=37 Identities=30% Similarity=0.497 Sum_probs=33.8
Q ss_pred CcccEEEECCChhHHHHHHhhhh-CCCeEEEeccCCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYY 39 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~-~G~~V~vlE~~~~~ 39 (328)
.++|++|||||.+|+++|.+|++ .|.+|+|||++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 36999999999999999999999 89999999997654
No 117
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.71 E-value=1.3e-08 Score=92.19 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=39.7
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCC--eEEEeccCCCCCCcccc
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDYYGGESSS 45 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~~~GG~~~s 45 (328)
+..+||+|||||++||+||.+|+++|. +|+|+|+++.+||....
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 456899999999999999999999999 99999999999986543
No 118
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.70 E-value=9.7e-09 Score=94.74 Aligned_cols=59 Identities=19% Similarity=0.153 Sum_probs=46.9
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcE--EEEEe-cCc-eEEcCEEEECCCCCcch
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKV--VGVTS-EGE-TAKCKKVVCDPSYLPNK 291 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v--~~v~~-~g~-~~~ad~vV~~~~~~~~~ 291 (328)
.+.+.+.+.+++.|++++++++|++|..++++++ +.|++ +|+ ++.||.||++++..|+.
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 4677888888999999999999999997634444 44566 565 89999999999887653
No 119
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.69 E-value=8.5e-09 Score=89.48 Aligned_cols=43 Identities=16% Similarity=0.222 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEecc----CCCCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDR----NDYYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~----~~~~GG~~~s 45 (328)
..+||+|||||++||+||+.|+++|++|+|+|+ +..+||....
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 458999999999999999999999999999999 4578887654
No 120
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.69 E-value=1.1e-08 Score=88.07 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=36.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
++||+|||||++||+||++|+++|++|+|+|++ +||....
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 479999999999999999999999999999998 8886654
No 121
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.68 E-value=1.1e-08 Score=88.54 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
..+||+|||||++|++||.+|+++|++|+|+|++ .+||.+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 3589999999999999999999999999999998 67886643
No 122
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.67 E-value=1.3e-08 Score=87.13 Aligned_cols=41 Identities=27% Similarity=0.318 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHHhhhhC--CCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++||+||+.|+++ |++|+|+|+++.+||.++
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 47999999999999999999998 999999999999988544
No 123
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.67 E-value=5.5e-09 Score=95.37 Aligned_cols=44 Identities=16% Similarity=0.329 Sum_probs=40.5
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|+.++||+|||||++|++||..|+++|++|+|+|+++.+||.+.
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 55679999999999999999999999999999999999998654
No 124
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.67 E-value=1.3e-08 Score=90.91 Aligned_cols=57 Identities=14% Similarity=0.129 Sum_probs=42.7
Q ss_pred CcHHHHHHHHHHHcCcEEEcCccee---------EEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPEC---------KVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~---------~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.|.+.+++.|++++++++|+ +|..+ ++++ .|++++++++||.||.+.+..+.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g~i~a~~VV~A~G~~s~ 237 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETRQIRAGVIIVAAGAAGP 237 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCcEEECCEEEECCCccHH
Confidence 4588999999999999999999999 99877 6665 67775558999999988887654
No 125
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.66 E-value=7.6e-09 Score=94.52 Aligned_cols=44 Identities=36% Similarity=0.471 Sum_probs=40.3
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|+.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 55579999999999999999999999999999999999998653
No 126
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.66 E-value=1.2e-08 Score=92.74 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++ .+.|+++++++.||.||++++..|+
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTTHGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEETTEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEECCcEEEcCEEEECCCCCcC
Confidence 47778888889999999999999999876 44 4456667778999999988877554
No 127
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.65 E-value=1e-08 Score=88.70 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=38.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
.+||+|||||++||+||+.|+++|++|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4799999999999999999999999999999999999876
No 128
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.65 E-value=1.1e-08 Score=92.98 Aligned_cols=43 Identities=21% Similarity=0.385 Sum_probs=38.7
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|++++||+|||||++|++||.+|++.|++|+|+|++ .+||.+.
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCV 43 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCc
Confidence 777899999999999999999999999999999998 6788654
No 129
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.65 E-value=9.9e-09 Score=89.77 Aligned_cols=37 Identities=14% Similarity=0.002 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCC------CeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDG------LKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G------~~V~vlE~~~~~GG 41 (328)
+||+|||||++||++|++|+++| .+|+|||++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 49999999999999999999998 99999999876555
No 130
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.65 E-value=2.1e-08 Score=88.67 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=35.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+||+|||||++||++|+.|+++|.+|+|+|+++.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 58999999999999999999999999999999887764
No 131
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.64 E-value=1.7e-08 Score=92.14 Aligned_cols=57 Identities=11% Similarity=0.124 Sum_probs=43.4
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecC---ceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEG---ETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g---~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++.+.....++ +++.+|.||++++..|+
T Consensus 222 ~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~-~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 222 QVAKEAQKILTKQGLKILLGARVTGTEVK-NKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp HHHHHHHHHHHHTTEEEEETCEEEEEEEC-SSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEc-CCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 46777778888999999999999999987 55544333333 57999999988776543
No 132
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.64 E-value=1.1e-08 Score=92.65 Aligned_cols=57 Identities=9% Similarity=0.088 Sum_probs=44.9
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++..+.|++ +|+++.||.||++++..|+
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN-TDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 46777778888999999999999999976 433344555 7778999999988876544
No 133
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.63 E-value=2.2e-08 Score=94.02 Aligned_cols=43 Identities=33% Similarity=0.520 Sum_probs=38.0
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
|+.++||+|||||++|++||++|+++|++|+|+|+.+..||.+
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 3456899999999999999999999999999999999998854
No 134
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.62 E-value=1.4e-08 Score=87.44 Aligned_cols=57 Identities=18% Similarity=0.056 Sum_probs=44.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-c----C--ceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E----G--ETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~----g--~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++++.+|+. + + +++.||.||++++..|+
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 35666777778899999999999999987 667766665 3 4 47999999998887654
No 135
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.62 E-value=2e-08 Score=92.47 Aligned_cols=43 Identities=26% Similarity=0.348 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC--------CCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND--------YYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~--------~~GG~~~s 45 (328)
.++||+|||||++|++||..|++.|++|+|+|+++ .+||.+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 81 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVN 81 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCC
Confidence 46899999999999999999999999999999964 78886643
No 136
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.61 E-value=2.5e-08 Score=81.96 Aligned_cols=52 Identities=21% Similarity=0.203 Sum_probs=40.3
Q ss_pred HHHHHHHHHHc-CcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC
Q 020312 235 PQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (328)
Q Consensus 235 ~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~ 288 (328)
.+.+.+.+++. |++++ +++|++|..+ ++++++|.+ ++++++||.||.+.+..
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCC
Confidence 34445556776 89998 6799999987 778777877 67789999999877764
No 137
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.60 E-value=2.9e-08 Score=92.01 Aligned_cols=42 Identities=29% Similarity=0.275 Sum_probs=39.0
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
.++||+|||||++|+++|+.|+++|.+|+|+|+++.+||.+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 468999999999999999999999999999999999998653
No 138
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.60 E-value=2.8e-08 Score=89.87 Aligned_cols=40 Identities=30% Similarity=0.331 Sum_probs=37.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
.+||+|||||++||+||++|+++|++|+|+|+++.+||..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 4799999999999999999999999999999999999853
No 139
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.59 E-value=3.1e-08 Score=88.36 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
+++|+|||||++||++|..|+++|++|+|+||++.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 368999999999999999999999999999997654
No 140
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.59 E-value=1.8e-08 Score=91.92 Aligned_cols=58 Identities=9% Similarity=0.006 Sum_probs=44.9
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cC-ceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG-ETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g-~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..++++.++.|++ +| +++.||.||++++..|+
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 466777788889999999999999998762343455666 66 68999999988876554
No 141
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.59 E-value=2.5e-08 Score=87.74 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=36.8
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCC-eEEEeccCCCCCCcc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGES 43 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~~~GG~~ 43 (328)
+++||+|||||++|+++|.+|++.|+ +|+|+|+++ +||..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~ 43 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSF 43 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcc
Confidence 46899999999999999999999999 999999998 88754
No 142
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.59 E-value=2.1e-08 Score=91.24 Aligned_cols=41 Identities=27% Similarity=0.411 Sum_probs=38.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++|++||.+|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 58999999999999999999999999999999999999764
No 143
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.59 E-value=3.8e-08 Score=87.56 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=34.4
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
.++||+|||||++||++|+.|+++|++|+|+|+++.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 4689999999999999999999999999999998763
No 144
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.58 E-value=2.1e-08 Score=91.83 Aligned_cols=40 Identities=23% Similarity=0.278 Sum_probs=36.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++|++||..|+++|++|+|+|++. +||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 4899999999999999999999999999999965 888763
No 145
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.58 E-value=1.6e-08 Score=92.68 Aligned_cols=57 Identities=19% Similarity=0.229 Sum_probs=45.9
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++..+.|++ +|+++.||.||++++..|+
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLN-TDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 46777888889999999999999999976 443345565 7778999999998887654
No 146
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.58 E-value=2.5e-08 Score=85.57 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=37.6
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEE-eccCCCCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLH-MDRNDYYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~v-lE~~~~~GG~~~s 45 (328)
+.+||+|||||++||+||..|+++|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 777886543
No 147
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=3.2e-08 Score=90.10 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=39.7
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
+.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 3569999999999999999999999999999999989999764
No 148
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.56 E-value=2.2e-08 Score=91.37 Aligned_cols=42 Identities=19% Similarity=0.299 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
.++||+|||||++|++||..|+++|++|+|+|++ .+||.+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 3689999999999999999999999999999976 67876533
No 149
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.55 E-value=2.6e-08 Score=90.80 Aligned_cols=42 Identities=24% Similarity=0.384 Sum_probs=39.0
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
.++||+|||||++|++||..|+++|++|+|+|+++.+||.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 468999999999999999999999999999999999999754
No 150
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.55 E-value=4.2e-08 Score=93.51 Aligned_cols=43 Identities=23% Similarity=0.366 Sum_probs=39.7
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
.++||+|||||++||+||++|+++|++|+|+|+++.+||.+..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 3589999999999999999999999999999999999997654
No 151
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.55 E-value=3.8e-08 Score=90.05 Aligned_cols=43 Identities=23% Similarity=0.259 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEecc--------CCCCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDR--------NDYYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~--------~~~~GG~~~s 45 (328)
.+|||+|||||++|++||..|++.|++|+|+|+ +..+||.|..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 55 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVN 55 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecc
Confidence 469999999999999999999999999999998 5678886643
No 152
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.54 E-value=3.9e-08 Score=85.41 Aligned_cols=42 Identities=24% Similarity=0.297 Sum_probs=37.0
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
+..+||+|||||++|++||+.|+++|++|+|+|+. .+||.+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 53 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALM 53 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcee
Confidence 44689999999999999999999999999999975 6777643
No 153
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.54 E-value=6.4e-08 Score=88.61 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=36.8
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
..+||+|||||++||++|..|+++|.+|+|+|+++.+|+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 3589999999999999999999999999999999888754
No 154
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.53 E-value=2.9e-08 Score=86.04 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=37.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEecc----CCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDR----NDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~----~~~~GG~~~ 44 (328)
++||+|||||++|+++|+.|+++|++|+|+|+ ...+||...
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 52 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLT 52 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceee
Confidence 58999999999999999999999999999999 567777654
No 155
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.53 E-value=3.6e-08 Score=89.37 Aligned_cols=57 Identities=19% Similarity=0.097 Sum_probs=45.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++. +.+++ +++++.||.||++++..|+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~-v~v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPE-AKG-ARVELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECCCeEEEcCEEEECcCCCcC
Confidence 356777888888999999999999999976 554 34555 6778999999988776543
No 156
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.53 E-value=5.3e-08 Score=82.82 Aligned_cols=56 Identities=14% Similarity=0.062 Sum_probs=42.7
Q ss_pred CCcCcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 229 YGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 229 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+...+.+.+.+.+++.|++++. ++|++|..+ + .|+. +++++.+|.||+++++.|.
T Consensus 171 ~~~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~~-~----~v~~~~g~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 171 NGIVEPDADQHALLAARGVRVET-TRIREIAGH-A----DVVLADGRSIALAGLFTQPKLRIT 227 (297)
T ss_dssp TTTCCCCHHHHHHHHHTTCEEEC-SCEEEEETT-E----EEEETTSCEEEESEEEECCEEECC
T ss_pred CCCCCCCHHHHHHHHHCCcEEEc-ceeeeeecC-C----eEEeCCCCEEEEEEEEEccCcccC
Confidence 33335667777888999999995 999999754 2 4555 7889999999998877653
No 157
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.53 E-value=6.1e-08 Score=89.65 Aligned_cols=41 Identities=27% Similarity=0.470 Sum_probs=38.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++|+++|..|++.|.+|+|+|+++.+||...
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 58999999999999999999999999999999999998654
No 158
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.52 E-value=6.9e-08 Score=89.59 Aligned_cols=38 Identities=26% Similarity=0.212 Sum_probs=35.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
++||+|||||++||++|..|+++|.+|+|||+++.++.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT 63 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 58999999999999999999999999999999987654
No 159
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.51 E-value=4.6e-08 Score=89.49 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++|+++++|++|..+ ++..+.|++ +|+++.||.||++++..|+
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 46777888889999999999999999987 443345566 6778999999998877654
No 160
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.51 E-value=5.6e-08 Score=86.38 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
++||+|||||++||++|+.|+++|++|+|+|+++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 57999999999999999999999999999999764
No 161
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.50 E-value=8.8e-08 Score=90.45 Aligned_cols=39 Identities=15% Similarity=0.276 Sum_probs=35.5
Q ss_pred CCcccEEEECCChhHHHHHHhhhh-CCCeEEEeccCCCCC
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYYG 40 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~-~G~~V~vlE~~~~~G 40 (328)
+.++||+|||||++||++|+.|++ +|.+|+|||+++.++
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 346899999999999999999999 999999999987654
No 162
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.50 E-value=4.5e-08 Score=88.98 Aligned_cols=41 Identities=29% Similarity=0.482 Sum_probs=37.0
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
.++||+|||||++|++||..|+++|++|+|+|++ .+||.+.
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 3689999999999999999999999999999998 6777653
No 163
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.48 E-value=9.3e-08 Score=86.82 Aligned_cols=41 Identities=15% Similarity=0.329 Sum_probs=38.0
Q ss_pred ccEEEECCChhHHHHHHhhhh---CCCe---EEEeccCCCCCCcccc
Q 020312 5 YDVIVLGTGLKECILSGLLSV---DGLK---VLHMDRNDYYGGESSS 45 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~---~G~~---V~vlE~~~~~GG~~~s 45 (328)
+||+|||||++||+||..|++ .|.+ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999987543
No 164
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.48 E-value=9.4e-08 Score=81.94 Aligned_cols=39 Identities=15% Similarity=0.305 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC-eEEEeccCCCCCCccc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESS 44 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~~~GG~~~ 44 (328)
+||+|||||++|++||..|+++|+ +|+|+|++ .+||.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~ 41 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQIT 41 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccc
Confidence 699999999999999999999999 99999995 6777654
No 165
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.47 E-value=8.8e-08 Score=84.73 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHhhhhC--CCeEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~~~~ 39 (328)
+||+|||||++||++|+.|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998776
No 166
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.47 E-value=9.3e-08 Score=87.34 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=42.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCc-----eEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE-----TAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~-----~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..++++.+ .|+. +++ ++.+|.||++++..|.
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 228 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccC
Confidence 4667777888999999999999999998634443 3443 332 6899999998877554
No 167
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.46 E-value=6e-08 Score=88.11 Aligned_cols=39 Identities=36% Similarity=0.499 Sum_probs=36.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
++||+|||||++|++||..|++.|++|+|+|+++ +||.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 6899999999999999999999999999999988 78765
No 168
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.45 E-value=1.3e-07 Score=90.67 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=39.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
.+||+|||||++||+||..|+++|++|+|+|+++.+||.+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 479999999999999999999999999999999999997644
No 169
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.43 E-value=9.7e-08 Score=85.87 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3699999999999999999999999999999986
No 170
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=7.3e-08 Score=87.39 Aligned_cols=40 Identities=13% Similarity=0.248 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++|++||..|++.|++|+|+|+ +.+||.+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 58999999999999999999999999999999 78888764
No 171
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=9.1e-08 Score=86.74 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=36.9
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
.++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 4689999999999999999999999999999998 778865
No 172
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.43 E-value=6.9e-08 Score=88.57 Aligned_cols=56 Identities=20% Similarity=0.161 Sum_probs=45.5
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++.+ .+++ +++++.||.||++++..|+
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTDGRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECCCcEEEcCEEEECCCCCcC
Confidence 46777888889999999999999999987 5554 4555 6778999999998877654
No 173
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.41 E-value=1.6e-07 Score=87.37 Aligned_cols=39 Identities=28% Similarity=0.414 Sum_probs=35.3
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC-CCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND-YYGG 41 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~-~~GG 41 (328)
.++||+|||||++|++||+.|++.|.+|+|+|++. .+|+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 46999999999999999999999999999999985 4555
No 174
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.41 E-value=1.5e-07 Score=88.62 Aligned_cols=54 Identities=13% Similarity=0.094 Sum_probs=43.5
Q ss_pred CcHHHHHHHHHHHc--CcEEEcCcceeEEEecCCC---cEEEEEe----cCc--eEEcCEEEECCC
Q 020312 232 GELPQAFARLSAVY--GGTYMLNKPECKVEFDEEG---KVVGVTS----EGE--TAKCKKVVCDPS 286 (328)
Q Consensus 232 ~~l~~~l~~~~~~~--G~~i~~~~~V~~I~~~~~~---~v~~v~~----~g~--~~~ad~vV~~~~ 286 (328)
..+...|.+.+++. |++|+.++.|++|..+ ++ ++++|.. +++ .+.|+.||++.+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~-~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATG 230 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLD-KNTPNRIAGAVGFNLRANEVHIFKANAMVVACG 230 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEEC-SSSTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEe-CCccceEEEEEEEEcCCCcEEEEEeCEEEECCC
Confidence 56888888888887 9999999999999998 55 8888864 343 489999887554
No 175
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.39 E-value=1.6e-07 Score=86.77 Aligned_cols=56 Identities=7% Similarity=0.080 Sum_probs=44.1
Q ss_pred CcHHHHHHHHHHH-cCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC
Q 020312 232 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (328)
Q Consensus 232 ~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~ 288 (328)
..+.+.|.+.+++ .|++++++ .|++|..++++.++.|++ +|++++||.||.+.+..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 3567778888888 89999999 599999874556667777 66789999999776653
No 176
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=1.4e-07 Score=86.47 Aligned_cols=57 Identities=7% Similarity=0.028 Sum_probs=45.1
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCce-EEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGET-AKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~-~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++..+.|++ +|++ +.+|.||++++..|+
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKV-SDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES-STTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEc-CCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 46777788889999999999999999876 333244555 7777 999999998887665
No 177
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.38 E-value=2.1e-07 Score=79.67 Aligned_cols=39 Identities=23% Similarity=0.448 Sum_probs=34.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++|++||..|+++|++|+|+|+ ..||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 47999999999999999999999999999986 4677654
No 178
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.38 E-value=1.1e-07 Score=87.00 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
++||+|||||++|++||++|+++ ++|+|+|+++++||....
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 47999999999999999999999 999999999999997643
No 179
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.36 E-value=2.5e-07 Score=72.64 Aligned_cols=33 Identities=39% Similarity=0.539 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+||+|||||++|+.+|..|++.|.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 699999999999999999999999999999976
No 180
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.36 E-value=3.2e-07 Score=87.15 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=38.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
.+||+|||||++|++||..|+++|++|+|+|+++.+||...
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 58999999999999999999999999999999999999753
No 181
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.34 E-value=1.9e-07 Score=84.78 Aligned_cols=39 Identities=28% Similarity=0.330 Sum_probs=36.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCC-----CeEEEeccCCCCCCc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDG-----LKVLHMDRNDYYGGE 42 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G-----~~V~vlE~~~~~GG~ 42 (328)
.+||+|||||++||++|..|+++| .+|+|||+++.+|..
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~ 73 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWH 73 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCc
Confidence 479999999999999999999999 999999999988743
No 182
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.34 E-value=2e-07 Score=91.93 Aligned_cols=41 Identities=27% Similarity=0.347 Sum_probs=39.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++|++||..|+++|++|+|+|+++.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 58999999999999999999999999999999999999876
No 183
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.33 E-value=4.6e-07 Score=78.69 Aligned_cols=36 Identities=22% Similarity=0.087 Sum_probs=32.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
+||+|||||++|+.||+.|+++|.+|+|+|++...+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 599999999999999999999999999999876433
No 184
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.33 E-value=2.4e-07 Score=85.28 Aligned_cols=57 Identities=9% Similarity=-0.020 Sum_probs=46.5
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|+++++++.|+++... ++.+. |.. +++++.+|.|+++.+..|+
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~-~~~~~-v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM-DDKIL-VEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE-TTEEE-EEETTSCEEEESEEEECSCEEES
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec-CCeEE-EEEcCCCeEEEEEEEEcccccCC
Confidence 347788888899999999999999999987 66644 444 7788999999998876553
No 185
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.31 E-value=4.1e-07 Score=84.45 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHhhhhCC-CeEEEeccCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDY 38 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G-~~V~vlE~~~~ 38 (328)
++||+||||||.||+++|..|++.| .+|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999998 79999999654
No 186
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.31 E-value=2.2e-07 Score=85.55 Aligned_cols=56 Identities=16% Similarity=0.181 Sum_probs=45.7
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~ 288 (328)
..+.+.|.+.+++.|++++++ +|++|..++++.++.|++ +|++++||.||.+.+..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcc
Confidence 457788888888899999999 999999864566777877 66689999999876653
No 187
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.31 E-value=3.8e-07 Score=82.47 Aligned_cols=55 Identities=20% Similarity=0.202 Sum_probs=43.5
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++. +++++++.|++|..+ + ++..+.++++++.||.||++++..|+
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~~-~-~v~~v~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEGE-E-RVEKVVTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEECS-S-SCCEEEETTEEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEecc-C-cEEEEEeCCCEEECCEEEEeeCCccC
Confidence 4566677777778 999999999999865 3 55556668889999999998887554
No 188
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.29 E-value=3.7e-07 Score=82.58 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=38.0
Q ss_pred CcccEEEECCChhHHHHHHhhhh-C------CCeEEEeccCCCCCCcc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSV-D------GLKVLHMDRNDYYGGES 43 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~-~------G~~V~vlE~~~~~GG~~ 43 (328)
..+||+|||||++|++||..|++ + |.+|+|+|+.+.+||.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~ 49 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV 49 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc
Confidence 46899999999999999999999 7 99999999999999865
No 189
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.28 E-value=5.1e-07 Score=89.64 Aligned_cols=40 Identities=23% Similarity=0.439 Sum_probs=37.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccCCCCCCcc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGES 43 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~~~GG~~ 43 (328)
.+||+|||||++||+||.+|+++|+ +|+|+|+.+.+||..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 4799999999999999999999999 799999999999964
No 190
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.27 E-value=5.9e-07 Score=79.51 Aligned_cols=56 Identities=16% Similarity=0.162 Sum_probs=45.7
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++. +.+++ +++++.||.||++++..|+
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKA-GEG-LEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEec-CCE-EEEEECCCCEEECCEEEECcCCCcC
Confidence 46777888888999999999999999876 554 44555 7788999999998887665
No 191
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.26 E-value=5.7e-07 Score=82.85 Aligned_cols=40 Identities=23% Similarity=0.476 Sum_probs=35.8
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
..+||+|||||++|++||.+|+++|++|+|+|+ .+||.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 468999999999999999999999999999996 5777654
No 192
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.24 E-value=6.6e-07 Score=82.98 Aligned_cols=36 Identities=36% Similarity=0.508 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.++|+||||||.+|+++|.+|+++|.+|+|||++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 369999999999999999999999999999999864
No 193
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.22 E-value=5.9e-07 Score=84.25 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=31.9
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
..+||+|||||++|++||.+|+++|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 3689999999999999999999999999999983
No 194
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.21 E-value=7.3e-07 Score=80.15 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=35.9
Q ss_pred ccEEEECCChhHHHHHHhhhh--CCCeEEEeccCCCCCCcc
Q 020312 5 YDVIVLGTGLKECILSGLLSV--DGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~--~G~~V~vlE~~~~~GG~~ 43 (328)
.||+|||||++|++||.+|++ .|++|+|+|+++..++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 599999999999999999999 899999999999887654
No 195
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.21 E-value=8e-07 Score=81.28 Aligned_cols=56 Identities=20% Similarity=0.157 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|+++++++.|++|..+ ++.+ .|++ +|+++.||.||++++..|+
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCcc
Confidence 35667777888999999999999999876 5554 5665 7889999999998887654
No 196
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.21 E-value=8.6e-07 Score=82.99 Aligned_cols=55 Identities=9% Similarity=0.016 Sum_probs=44.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++. |+. +++++.||.||++++..|+
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~---v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GAV---VRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GTE---EEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CCE---EEECCCCEEEcCEEEEccCCCCC
Confidence 346777888889999999999999999865 443 444 7789999999998887554
No 197
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.20 E-value=1e-06 Score=83.40 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=33.6
Q ss_pred cccEEEECCChhHHHHHHhhhh-----CCCeEEEeccCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSV-----DGLKVLHMDRNDYY 39 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~-----~G~~V~vlE~~~~~ 39 (328)
++||+|||||++||++|..|++ +|.+|+|+|+++.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 5899999999999999999999 99999999998654
No 198
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.16 E-value=1.3e-06 Score=77.98 Aligned_cols=52 Identities=23% Similarity=0.204 Sum_probs=42.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|. + + .|++ +|+++.||.||++++..|+
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~----~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D-G----VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T-T----EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C----EEEECCCCEEEcCEEEECcCCCcc
Confidence 466777788889999999999999998 5 4 3555 7788999999999887665
No 199
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.15 E-value=1.3e-06 Score=79.01 Aligned_cols=41 Identities=15% Similarity=0.037 Sum_probs=37.3
Q ss_pred CcccEEEECCChhHHHHHHhhhhCC--CeEEEeccCCCCCCcc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGES 43 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G--~~V~vlE~~~~~GG~~ 43 (328)
..+||+|||||++|++||..|++.| .+|+|+|+.+.+||..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 3589999999999999999999998 9999999999998754
No 200
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.15 E-value=1.3e-06 Score=78.78 Aligned_cols=39 Identities=26% Similarity=0.401 Sum_probs=35.5
Q ss_pred CCCcccEEEECCChhHHHHHHhhhh---CCCeEEEeccCCCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDYY 39 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~---~G~~V~vlE~~~~~ 39 (328)
|+...||+|||||++|++||.+|++ .|++|+|+|+++..
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 5556799999999999999999999 89999999998864
No 201
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.15 E-value=8.4e-07 Score=79.18 Aligned_cols=53 Identities=17% Similarity=0.177 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcch
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPNK 291 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~~ 291 (328)
.+.+.+.+.+++.|++++++++|++|..+ . |++ +|+++.||.||++++..|+.
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~---~---v~~~~g~~~~~D~vi~a~G~~~~~ 272 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH---E---IVDEKGNTIPADITILLPPYTGNP 272 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS---E---EEETTSCEEECSEEEEECCEECCH
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC---e---EEECCCCEEeeeEEEECCCCCccH
Confidence 56777888889999999999999999643 2 444 78899999999888776543
No 202
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.11 E-value=1.6e-06 Score=78.27 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=44.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ ++++.+.++++++.||.||++++..|+
T Consensus 192 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 192 EFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTDKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEESSCEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEECCCEEECCEEEECcCCCCC
Confidence 46677778888899999999999999865 444456667788999999988876554
No 203
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.08 E-value=1.8e-06 Score=78.95 Aligned_cols=56 Identities=18% Similarity=0.222 Sum_probs=44.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|.. ++++..++++++++.||.||++++..|+
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIITDKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEESSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEECCcEEECCEEEECCCCCcC
Confidence 4667777888899999999999999985 3455556668889999999998877554
No 204
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.06 E-value=2.4e-06 Score=77.90 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=45.9
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|++++++++|++|..+ +++..+.++++++.||.||++++..|+
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 228 DMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETDKGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETTEEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECCCEEEcCEEEECcCCCcC
Confidence 46677888889999999999999999865 456667777778999999998877553
No 205
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.06 E-value=1.9e-06 Score=79.81 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=33.4
Q ss_pred cccEEEECCChhHHHHHHhhhh-CCCeEEEeccCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYY 39 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~-~G~~V~vlE~~~~~ 39 (328)
+||+||||||.+|+++|.+|++ .|.+|+|||+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 6899999999999999999998 78999999997655
No 206
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=3e-06 Score=74.45 Aligned_cols=35 Identities=23% Similarity=0.214 Sum_probs=32.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
.||+|||||++|++||..|++.| +|+|+|+++..+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~ 43 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY 43 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc
Confidence 69999999999999999999999 999999988653
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.05 E-value=2.6e-06 Score=79.28 Aligned_cols=58 Identities=16% Similarity=0.149 Sum_probs=45.0
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEec------------------CCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFD------------------EEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~------------------~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
.+.+.+.+.+++.|+++++++.|++|..+ +++++..+..+++++.||.||++++..|+
T Consensus 193 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 193 EMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 46677777888999999999999999872 14554433347889999999999887654
No 208
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.02 E-value=4.6e-06 Score=73.70 Aligned_cols=39 Identities=10% Similarity=0.133 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
++.+|+|||||++|++||..|...|.+|+|+|+++..+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 358999999999999999999888999999999988764
No 209
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.94 E-value=5.4e-05 Score=68.30 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.+++|||||.+|+-+|..|++.|.+|+|+|++++
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 5799999999999999999999999999998654
No 210
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.84 E-value=9.2e-06 Score=72.92 Aligned_cols=55 Identities=18% Similarity=0.162 Sum_probs=39.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-c--CceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E--GETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~--g~~~~ad~vV~~~~~~~~ 290 (328)
....+.+.+.++++|+++++++.|++|+ +++++ ++. + ++++.||.||.+++..++
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~---~~~~~-~~~~~g~~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIE---PDKVI-YEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEEC---SSEEE-EECTTSCEEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEe---CCceE-EEeeCCCceEeecceEEEeccCCCc
Confidence 4455666677888999999999999995 33433 333 3 357999999887765443
No 211
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.83 E-value=1.1e-05 Score=73.78 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
+.+|||||||.+|+++|..|.+++++|+|+|++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 46899999999999999999999999999999874
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.83 E-value=1.1e-05 Score=72.59 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=42.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|+++++++.|++++.+ . ++. +++++.+|.||++.+..|+
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~---~---v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAINGN---E---ITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEETT---E---EEETTSCEEECSEEEECCCEEES
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecCC---e---eeecCCeEEeeeeEEEEeceecC
Confidence 457778888899999999999999998633 2 334 8889999999988876553
No 213
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.00015 Score=66.00 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
-+++|||||..|+-+|..|++.|.+|+++|++++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 5799999999999999999999999999998654
No 214
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.76 E-value=1.5e-05 Score=70.75 Aligned_cols=47 Identities=17% Similarity=0.053 Sum_probs=36.5
Q ss_pred HHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcc
Q 020312 242 SAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 242 ~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~ 290 (328)
+++.|+++++++.+..++.+ ++... +++ +|+++.||.||++++..|+
T Consensus 212 l~~~gi~v~~~~~v~~v~~~-~~~~~-v~~~~g~~i~~D~vi~~~g~~~~ 259 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTD-TEAMT-VETSFGETFKAAVINLIPPQRAG 259 (401)
T ss_dssp STTCSEEEECTTTTCEEEEE-TTTTE-EEETTSCEEECSEEEECCCEEEC
T ss_pred HHhcCcEEEeCceEEEEEec-ccceE-EEcCCCcEEEeeEEEEecCcCCc
Confidence 45679999999999999987 44433 455 8889999999988776544
No 215
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=0.00025 Score=64.83 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
-+++|||||.+|+-+|..|++.|.+|+|+|++++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 210 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 210 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 4799999999999999999999999999998654
No 216
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.35 E-value=2.9e-05 Score=71.05 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=24.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+||||||+|++||++|..|.++|...+++|+.+
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~ 72 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASN 72 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC--
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccc
Confidence 799999999999999999987654433333333
No 217
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.04 E-value=0.00062 Score=61.26 Aligned_cols=39 Identities=28% Similarity=0.290 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
...+++|||||.+|+.+|..|++.|.+|+|+|+++.+..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 186 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG 186 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc
Confidence 357899999999999999999999999999999887655
No 218
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.97 E-value=0.00058 Score=60.19 Aligned_cols=38 Identities=13% Similarity=0.034 Sum_probs=35.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
.+|+|||||.+|+-+|..|++.|.+|+|+|+++++..+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999887665
No 219
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.95 E-value=0.00072 Score=57.59 Aligned_cols=36 Identities=22% Similarity=0.164 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
.+|+|||||..|+-+|..|++.|.+|+|+|+++++-
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 479999999999999999999999999999988763
No 220
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.94 E-value=0.00078 Score=49.81 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
.++|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999999999999999984
No 221
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.82 E-value=0.0012 Score=50.05 Aligned_cols=34 Identities=24% Similarity=0.485 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
...|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 222
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.79 E-value=0.00095 Score=60.26 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||.+|+-+|..|++.|.+|+|+|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 223
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.76 E-value=0.0011 Score=59.86 Aligned_cols=37 Identities=16% Similarity=0.088 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||.+|+-+|..|++.|.+|+|+|+++++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 5799999999999999999999999999999887654
No 224
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.72 E-value=0.0013 Score=59.38 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
.+++|||||.+|+.+|..|++.|.+|+|+|+++++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l 203 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc
Confidence 579999999999999999999999999999988754
No 225
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.71 E-value=0.0015 Score=57.44 Aligned_cols=39 Identities=23% Similarity=0.310 Sum_probs=35.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
..+++|||||.+|+-+|..|++.|.+|+|+|+++++...
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc
Confidence 458999999999999999999999999999998876554
No 226
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.69 E-value=0.0017 Score=54.59 Aligned_cols=37 Identities=30% Similarity=0.334 Sum_probs=33.7
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
|+.-.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 6656789999999999999999999999999999864
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.69 E-value=0.0014 Score=57.38 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||.+|+-+|..|++.|.+|+++|+++++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 5799999999999999999999999999999887654
No 228
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.68 E-value=0.0014 Score=59.11 Aligned_cols=38 Identities=18% Similarity=0.144 Sum_probs=34.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
..+++|||||.+|+-+|..|++.|.+|+|+|+++++..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 35899999999999999999999999999999887654
No 229
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.66 E-value=0.0021 Score=48.47 Aligned_cols=33 Identities=18% Similarity=0.088 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
+.+|+|+|+|-.|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 568999999999999999999999999999985
No 230
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.64 E-value=0.0019 Score=47.94 Aligned_cols=33 Identities=33% Similarity=0.498 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..|+|+|+|-.|...|..|.++|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999853
No 231
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.64 E-value=0.0018 Score=48.12 Aligned_cols=33 Identities=12% Similarity=0.289 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
-+|+|+|.|-.|...|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 579999999999999999999999999999854
No 232
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.64 E-value=0.0017 Score=58.89 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||.+|+-+|..|++.|.+|+|+|+++++..
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 220 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA 220 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc
Confidence 5799999999999999999999999999999988765
No 233
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.61 E-value=0.0016 Score=56.59 Aligned_cols=36 Identities=31% Similarity=0.361 Sum_probs=31.4
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
||+.++|+|||+|..|...|..|+++|++|++++++
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 666789999999999999999999999999999885
No 234
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.60 E-value=0.0021 Score=54.59 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
.+++|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 57999999999999999999999999999986653
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.50 E-value=0.0031 Score=55.96 Aligned_cols=39 Identities=13% Similarity=0.227 Sum_probs=35.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
..+|+|||||.+|+-+|..|++.|.+|+++|+++++..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 368999999999999999999999999999999876553
No 236
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.45 E-value=0.0029 Score=45.08 Aligned_cols=32 Identities=22% Similarity=0.447 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCC-CeEEEeccC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDG-LKVLHMDRN 36 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G-~~V~vlE~~ 36 (328)
.+|+|+|+|..|..+|..|.+.| ++|++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 57999999999999999999999 999999984
No 237
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.43 E-value=0.0026 Score=57.48 Aligned_cols=36 Identities=28% Similarity=0.293 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
-+++|||||.+|+-+|..|++.|.+|+|+|+++++.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 479999999999999999999999999999987754
No 238
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.40 E-value=0.0026 Score=54.13 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
-+|+|||+|..|...|..++++|++|+++|.+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999764
No 239
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.34 E-value=0.0031 Score=53.92 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=34.0
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
|....+|+|||+|..|.+.|..|+++|+ +|++++.+.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 6667899999999999999999999998 999999864
No 240
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.31 E-value=0.0035 Score=53.66 Aligned_cols=33 Identities=30% Similarity=0.495 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|+|||+|..|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999865
No 241
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.30 E-value=0.0026 Score=57.00 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=33.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
..+|.|||.|.+|+++|..|+++|++|++.|.++..-
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 4579999999999999999999999999999987543
No 242
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.30 E-value=0.0023 Score=58.14 Aligned_cols=38 Identities=29% Similarity=0.336 Sum_probs=34.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
..+|+|||||.+|+-+|..|++.|.+|+|+|+++.+..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 46899999999999999999999999999999887654
No 243
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.29 E-value=0.0033 Score=57.22 Aligned_cols=38 Identities=24% Similarity=0.222 Sum_probs=34.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
..+|+|||||.+|+-+|..|++.|.+|+|+|+++++-.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 35799999999999999999999999999999887654
No 244
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.27 E-value=0.0036 Score=56.72 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||.+|+-+|..|++.|.+|+|+|+++++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 5799999999999999999999999999999987655
No 245
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.26 E-value=0.0043 Score=52.61 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 246
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.25 E-value=0.0042 Score=56.56 Aligned_cols=38 Identities=26% Similarity=0.220 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
-+++|||||.+|+-+|..|++.|.+|+++|+++++...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 57999999999999999999999999999999887543
No 247
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.25 E-value=0.003 Score=57.34 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||..|+-+|..|++.|.+|+|+|+++++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 5799999999999999999999999999999887654
No 248
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.23 E-value=0.0038 Score=56.16 Aligned_cols=34 Identities=26% Similarity=0.191 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|.|||.|.+|+++|..|.++|++|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3579999999999999999999999999999865
No 249
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.22 E-value=0.0055 Score=54.77 Aligned_cols=39 Identities=13% Similarity=0.149 Sum_probs=34.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
..+|+|||||.+|+-+|..|++.|.+|+++|+++.+..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 187 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER 187 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 357999999999999999999999999999998876543
No 250
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.21 E-value=0.004 Score=56.20 Aligned_cols=37 Identities=16% Similarity=0.083 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
-+++|||||.+|+-+|..|++.|.+|+|+|+++++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 5799999999999999999999999999999887654
No 251
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.19 E-value=0.0039 Score=53.16 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|+|||+|..|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999864
No 252
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.18 E-value=0.0044 Score=52.39 Aligned_cols=37 Identities=14% Similarity=-0.032 Sum_probs=32.4
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
+...+|.|||.|..|...|..|+++|++|++++++..
T Consensus 13 ~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 13 TEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp --CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3356899999999999999999999999999998754
No 253
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.18 E-value=0.005 Score=52.65 Aligned_cols=37 Identities=19% Similarity=0.420 Sum_probs=32.9
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
|+...+|+|||+|-.|.+.|..|++.|+ +|.++|.+.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 6666799999999999999999999998 999999764
No 254
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.16 E-value=0.0044 Score=48.20 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHhhhhC-CCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVD-GLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~-G~~V~vlE~~~ 37 (328)
.+|+|+|+|..|...|..|.+. |++|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 5799999999999999999999 99999999854
No 255
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.15 E-value=0.0058 Score=54.24 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=34.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+++-.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 45799999999999999999999999999999887644
No 256
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.12 E-value=0.0038 Score=50.15 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|+|+|+|-.|...|..|.++|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999853
No 257
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.11 E-value=0.0049 Score=53.08 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
.++|+|||+|..|.+.|..|+++|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 568999999999999999999999999999874
No 258
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.11 E-value=0.0053 Score=52.01 Aligned_cols=35 Identities=29% Similarity=0.224 Sum_probs=32.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGF 178 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 57999999999999999999999999999998776
No 259
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.09 E-value=0.0043 Score=53.95 Aligned_cols=36 Identities=11% Similarity=0.042 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
.+|+|||+|.+|+-+|..|++.|.+|+++|+++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 479999999999999999999999999999976543
No 260
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.07 E-value=0.0057 Score=54.98 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
.+++|||||.+|+-+|..|++.|.+|+++|+++++...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 48999999999999999999999999999998876554
No 261
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.03 E-value=0.0056 Score=51.82 Aligned_cols=35 Identities=17% Similarity=-0.049 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 47999999999999999999999999999998876
No 262
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.02 E-value=0.0056 Score=53.13 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=32.0
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
|++.++|.|||.|..|...|..|+++|++|++++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 5566899999999999999999999999999999864
No 263
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.02 E-value=0.0045 Score=55.45 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
.+++|||||..|+-+|..|++.|.+|+|+|+++++...
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~ 185 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL 185 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc
Confidence 47999999999999999999999999999998876543
No 264
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.02 E-value=0.0051 Score=55.39 Aligned_cols=36 Identities=28% Similarity=0.249 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHhhhhC-CC-eEEEeccCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVD-GL-KVLHMDRNDY 38 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~-G~-~V~vlE~~~~ 38 (328)
+.++|.|||+|..|+..|..|+++ |+ +|++++++..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999998865
No 265
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.00 E-value=0.019 Score=46.45 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+++||+|||||++|+.+|..|++.|.+|+|+|++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46999999999999999999999999999999973
No 266
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.00 E-value=0.0036 Score=56.63 Aligned_cols=37 Identities=14% Similarity=0.131 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||.+|+-+|..|++.|.+|+|+|+++++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999887654
No 267
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.98 E-value=0.0053 Score=45.39 Aligned_cols=32 Identities=28% Similarity=0.241 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
.+|+|+|+|..|...|..|.+.|++|++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999974
No 268
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.97 E-value=0.006 Score=54.75 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999864
No 269
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.97 E-value=0.0058 Score=55.28 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
.++|+|||+|..|+..|..|+++|++|++++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 479999999999999999999999999999985
No 270
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.94 E-value=0.007 Score=51.67 Aligned_cols=36 Identities=22% Similarity=0.178 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 479999999999999999999999999999987653
No 271
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.94 E-value=0.0064 Score=54.67 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||.+|+-+|..|++.|.+|+++|+++++-.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh
Confidence 5799999999999999999999999999999887644
No 272
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.93 E-value=0.0069 Score=51.84 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 57999999999999999999999999999998765
No 273
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.92 E-value=0.0067 Score=52.10 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
++|+|||+|-.|.+.|..|++.|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 689999999999999999999998 999999864
No 274
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.91 E-value=0.0049 Score=55.48 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..++|+|+|+|-.|.+.|..|.+.|++|+|+|++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35789999999999999999999999999999864
No 275
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.91 E-value=0.0068 Score=54.78 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||||.+|+-+|..|++.|.+|+|+|+++++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 5799999999999999999999999999999887654
No 276
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.90 E-value=0.0075 Score=50.58 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
+|.|||+|..|...|..|+++|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998753
No 277
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=95.88 E-value=0.0062 Score=54.99 Aligned_cols=36 Identities=14% Similarity=-0.021 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
.+|+|||+|.+|+=+|..|++.|.+|+++++++.+-
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 579999999999999999999999999999987653
No 278
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.88 E-value=0.0068 Score=51.70 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||+|.-|.+.|..|+++|++|++++++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 279
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.86 E-value=0.0077 Score=51.57 Aligned_cols=37 Identities=14% Similarity=0.147 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4799999999999999999999999999999876543
No 280
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.85 E-value=0.0081 Score=51.57 Aligned_cols=36 Identities=22% Similarity=0.277 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
..+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 357999999999999999999999999999998765
No 281
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=95.82 E-value=0.009 Score=52.85 Aligned_cols=38 Identities=18% Similarity=0.230 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
.+++|||+|.+|+-+|..|++.|.+|+++|+.+++..+
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~ 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh
Confidence 57999999999999999999999999999998876554
No 282
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.81 E-value=0.0075 Score=55.55 Aligned_cols=34 Identities=21% Similarity=0.090 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.+|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 5799999999999999999999999999999764
No 283
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.80 E-value=0.008 Score=53.37 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=35.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
..+++|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~ 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh
Confidence 357999999999999999999999999999998876544
No 284
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.77 E-value=0.0089 Score=50.26 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+.+|.|||+|..|.+.|..|+ +|++|++++++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 578999999999999999999 999999999864
No 285
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.75 E-value=0.02 Score=52.52 Aligned_cols=44 Identities=32% Similarity=0.443 Sum_probs=40.2
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|+.++||+|||||++|++||++|++.|++|+|+|+++.+||.+.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 44569999999999999999999999999999999998898764
No 286
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.74 E-value=0.0047 Score=54.71 Aligned_cols=39 Identities=21% Similarity=0.324 Sum_probs=35.4
Q ss_pred cccEEEECCChhHHHHHHhhhhC--CCeEEEeccCCCCCCc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGE 42 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~~~~GG~ 42 (328)
++||+|||||++|+++|++|+++ |.+|+|||+++..+|.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 48999999999999999999999 9999999998665554
No 287
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.72 E-value=0.0089 Score=53.65 Aligned_cols=35 Identities=14% Similarity=-0.017 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCe-EEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLK-VLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~-V~vlE~~~~~ 39 (328)
.+|+|||+|.+|+=+|..|++.|.+ |+|+++++..
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998754
No 288
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.71 E-value=0.0086 Score=55.49 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+|+|||||.+|+-+|..|++.|.+|+++|+++++..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 4899999999999999999999999999999886544
No 289
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.71 E-value=0.0092 Score=50.93 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC--eEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~ 37 (328)
.++|+|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999999 999999863
No 290
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.71 E-value=0.011 Score=47.12 Aligned_cols=35 Identities=14% Similarity=0.262 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
..+|.|||+|..|.+.|..|+++|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 36799999999999999999999999999998754
No 291
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.68 E-value=0.0092 Score=50.68 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||+|..|...|..|+++|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999998853
No 292
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.68 E-value=0.022 Score=51.90 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=37.0
Q ss_pred cccEEEECCChhHHHHHHhhhhC---CCeEEEeccCCCCCCccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVD---GLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~---G~~V~vlE~~~~~GG~~~ 44 (328)
++||+|||||++|++||++|+++ |++|+|+|+++ +||.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~ 44 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAV 44 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCccc
Confidence 48999999999999999999999 99999999998 888654
No 293
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.68 E-value=0.0095 Score=50.68 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 47999999999999999999999999999998765
No 294
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.68 E-value=0.0077 Score=54.79 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
-+|+|||||.+|+-+|..|++.|.+|+|+|+.+++..
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 235 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG 235 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc
Confidence 5799999999999999999999999999999887654
No 295
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.67 E-value=0.0095 Score=53.96 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
-+++|||||.+|+-+|..|++.|.+|+++|+++++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 579999999999999999999999999999987754
No 296
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.66 E-value=0.0075 Score=50.02 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
...|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999999999999999999999999998753
No 297
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.66 E-value=0.011 Score=50.24 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=31.4
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
+..+|+|||+|..|.++|+.|++.|+ +|+++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34689999999999999999999999 99999985
No 298
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=95.65 E-value=0.0099 Score=53.68 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
..++|||||.+|+-+|..|++.|.+|+++|+++++-..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 210 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT 210 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC
Confidence 57999999999999999999999999999998876543
No 299
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.64 E-value=0.0087 Score=55.19 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.+|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 5799999999999999999999999999999764
No 300
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.64 E-value=0.019 Score=52.12 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHhhhh-CCCeEEEec--------cCCCCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMD--------RNDYYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~-~G~~V~vlE--------~~~~~GG~~~s 45 (328)
.++||+|||||++|++||++|++ +|++|+|+| +++.+||.+..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46899999999999999999999 999999999 46788986643
No 301
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.63 E-value=0.011 Score=51.18 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
.++|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999985
No 302
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.61 E-value=0.013 Score=47.07 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
...|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999999999999864
No 303
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.60 E-value=0.022 Score=51.83 Aligned_cols=44 Identities=23% Similarity=0.309 Sum_probs=39.4
Q ss_pred CCCcccEEEECCChhHHHHHHhhhh-CCCeEEEec--------cCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSV-DGLKVLHMD--------RNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~-~G~~V~vlE--------~~~~~GG~~~ 44 (328)
|+.++||+|||||++|++||++|++ +|++|+|+| +++.+||.+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~ 56 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCV 56 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeee
Confidence 6667999999999999999999999 999999999 4678888654
No 304
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.58 E-value=0.0071 Score=51.03 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|+|||+|.-|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999873
No 305
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.56 E-value=0.011 Score=53.12 Aligned_cols=37 Identities=16% Similarity=0.023 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 184 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP 184 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc
Confidence 4799999999999999999999999999999887654
No 306
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.56 E-value=0.012 Score=50.29 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||+|.+|+-+|..|++.|.+|+++++++.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 5799999999999999999999999999999876543
No 307
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.54 E-value=0.011 Score=49.83 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=31.6
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
|...++|.|||+|..|...|..|++.|++|++++++.
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6667899999999999999999999999999998853
No 308
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.51 E-value=0.013 Score=52.71 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 309
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.51 E-value=0.014 Score=50.61 Aligned_cols=37 Identities=19% Similarity=0.207 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
-+|+|||+|.+|+-+|..|++.|.+|+++++++.+..
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 4799999999999999999999999999999876543
No 310
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.50 E-value=0.014 Score=50.09 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
.+|+|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999998 999999874
No 311
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.45 E-value=0.041 Score=50.18 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHhhhh---CCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~---~G~~V~vlE~~~~ 38 (328)
+||||||||++|+++|+.|++ +|.+|+|+|+.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 699999999999999999999 9999999999764
No 312
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.45 E-value=0.023 Score=51.16 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=37.7
Q ss_pred CCC-cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDE-EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~-~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|++ ++||+|||||++|++||++|+++|++|+|+|+ +.+||.+.
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 554 69999999999999999999999999999999 77888654
No 313
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.45 E-value=0.011 Score=53.38 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=32.3
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhC--CCeEEEeccC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRN 36 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~ 36 (328)
|.+.++|.|||.|..|+..|..|+++ |++|++++++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 45457899999999999999999999 8999999885
No 314
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.44 E-value=0.013 Score=53.01 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999864
No 315
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.43 E-value=0.015 Score=52.01 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.+|.|||+|..|.+.|..|+++|++|+++|++..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999998764
No 316
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.43 E-value=0.028 Score=50.94 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=37.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcccc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~s 45 (328)
++||+|||||++||+||++|+++|++|+|+|+ +.+||.+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 68999999999999999999999999999999 778886543
No 317
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.43 E-value=0.013 Score=50.06 Aligned_cols=33 Identities=24% Similarity=0.538 Sum_probs=29.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|+|||+|.-|...|..|+++|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 368999999999999999999999999999 653
No 318
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.42 E-value=0.014 Score=49.60 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|+|||+|..|...|..|+ +|++|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999999864
No 319
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.41 E-value=0.0095 Score=54.97 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.+|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 5799999999999999999999999999999664
No 320
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.41 E-value=0.0096 Score=53.62 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHhhhhC--CCeEEEeccCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDY 38 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~~~ 38 (328)
..+|+|||||.+|+=+|..|++. |.+|+++++++.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 46899999999999999999998 899999998664
No 321
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.41 E-value=0.015 Score=49.79 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHH-HHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECI-LSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~-aA~~L~~~G~~V~vlE~~~~ 38 (328)
.+|.|||.|.+|++ +|..|.++|++|++.|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 47999999999997 78889999999999999764
No 322
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.40 E-value=0.015 Score=49.35 Aligned_cols=33 Identities=30% Similarity=0.300 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 689999999999999999999999999999875
No 323
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.40 E-value=0.011 Score=55.11 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
-+|+|||||.+|+-+|..|++.|.+|+|+|++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999987
No 324
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.38 E-value=0.014 Score=49.42 Aligned_cols=32 Identities=28% Similarity=0.424 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHhhhhCCC--eEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~ 37 (328)
+|+|||+|..|.+.|..|+++|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 999999863
No 325
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.36 E-value=0.037 Score=46.89 Aligned_cols=43 Identities=14% Similarity=0.222 Sum_probs=37.6
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
||.++||+|||||++|++||++|+++|++|+|+|+. .+||.+.
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 455799999999999999999999999999999974 6777543
No 326
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.34 E-value=0.015 Score=50.04 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
+++|.|||+|.-|...|..|+++|++|+++.++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 478999999999999999999999999999885
No 327
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.33 E-value=0.013 Score=52.39 Aligned_cols=31 Identities=26% Similarity=0.492 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
+|.|||+|..|+..|..|+++|++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 6999999999999999999999999999985
No 328
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.33 E-value=0.017 Score=50.67 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|+|+|+|..|+.+|..|...|.+|+++|++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999865
No 329
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.30 E-value=0.043 Score=42.20 Aligned_cols=56 Identities=18% Similarity=0.126 Sum_probs=44.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCCCcc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~~~~ 290 (328)
..+.+.+.+.+++.|++++++ +|++|..+ ++. +.+++++++++||.||.+.+..|.
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~-~~~-~~v~~~~g~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM-GGV-FEVETEEGVEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC-SSS-EEEECSSCEEEEEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc-CCE-EEEEECCCEEEECEEEECCCCCCC
Confidence 356777778888899999999 99999987 555 445663338999999999888774
No 330
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.30 E-value=0.016 Score=51.76 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
...++|||.|..|+..|..|+++|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 331
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.28 E-value=0.017 Score=49.29 Aligned_cols=34 Identities=12% Similarity=0.213 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC--eEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~ 37 (328)
.++|+|||+|-.|.+.|+.|++.|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 5799999999999999999999997 999999863
No 332
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.28 E-value=0.015 Score=54.12 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
.+++|||||.+|+-+|..|++.|.+|+++|+++++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 57999999999999999999999999999998876543
No 333
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.26 E-value=0.012 Score=53.96 Aligned_cols=36 Identities=17% Similarity=-0.057 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~G 40 (328)
.+|+|||||.+|+-+|..|++.|.+|+++|+++.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999987764
No 334
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=95.24 E-value=0.012 Score=51.30 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
+|.|||+|..|.+.|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 7999999999999999999999999999875
No 335
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.24 E-value=0.016 Score=49.50 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=31.5
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCC----CeEEEeccCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDG----LKVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G----~~V~vlE~~~ 37 (328)
|+..++|.|||+|..|.+.|..|+++| ++|++++++.
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 344578999999999999999999999 8999999865
No 336
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.21 E-value=0.019 Score=48.87 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4789999999999999999999999999999864
No 337
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.18 E-value=0.016 Score=42.98 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=30.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
...|+|||+|..|...|..|++.|.+|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 357999999999999999999999999999875
No 338
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.16 E-value=0.011 Score=50.25 Aligned_cols=35 Identities=26% Similarity=0.470 Sum_probs=29.8
Q ss_pred CCCc-ccEEEECCChhHHHHHHhhhhC-----C-CeEEEecc
Q 020312 1 MDEE-YDVIVLGTGLKECILSGLLSVD-----G-LKVLHMDR 35 (328)
Q Consensus 1 ~~~~-~dvvIvG~G~aGl~aA~~L~~~-----G-~~V~vlE~ 35 (328)
|+.. ++|.|||+|..|...|..|+++ | ++|+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4443 5899999999999999999999 9 99999987
No 339
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.11 E-value=0.019 Score=48.53 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.++|.|||.|..|...|..|+++|++|++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 340
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.11 E-value=0.018 Score=49.24 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.3
Q ss_pred CCC-cccEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 1 MDE-EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 1 ~~~-~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
|++ ..+|+|||+|..|.++|+.|++.|. +|+++|.+
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 544 4799999999999999999999997 89999974
No 341
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.06 E-value=0.023 Score=48.51 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
..+|+|||+|..|.+.|+.|++.|+ +|.++|.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 5689999999999999999999999 999999865
No 342
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=95.06 E-value=0.015 Score=49.88 Aligned_cols=30 Identities=30% Similarity=0.226 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEecc
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDR 35 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~ 35 (328)
+|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 343
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.05 E-value=0.02 Score=50.74 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.++|.|||.|..|+..|..|++ |++|++++++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3689999999999999999998 99999999864
No 344
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.05 E-value=0.022 Score=48.44 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHhhhhC--CCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~~ 37 (328)
++|+|||+|..|.+.|..|++. |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3799999999999999999985 79999999864
No 345
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.04 E-value=0.019 Score=50.76 Aligned_cols=31 Identities=29% Similarity=0.263 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+|.|||.|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999853
No 346
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=95.01 E-value=0.023 Score=52.08 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
-+++|||||.+|+-+|..|++.|.+|+|+|++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999985
No 347
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.01 E-value=0.023 Score=51.60 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
-+++|||||.+|+-+|..|++.|.+|+++|+..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 479999999999999999999999999999864
No 348
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.00 E-value=0.021 Score=51.35 Aligned_cols=35 Identities=26% Similarity=0.174 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC-eEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~~~ 39 (328)
.+|+|||||.+|+-+|..|.+.|. +|+++++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 579999999999999999999997 59999998764
No 349
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.00 E-value=0.021 Score=47.92 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999874
No 350
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.00 E-value=0.018 Score=49.94 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
+.+|+|+|+|.+|..||..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 5689999999999999999999998 999999974
No 351
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.00 E-value=0.051 Score=48.96 Aligned_cols=43 Identities=23% Similarity=0.312 Sum_probs=39.6
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCccc
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 44 (328)
|+.++||+|||||++|++||.+|+++|++|+|+|++ .+||.+.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 777899999999999999999999999999999998 6788654
No 352
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.98 E-value=0.023 Score=48.46 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 589999999999999999999999999999864
No 353
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.97 E-value=0.011 Score=47.43 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEE-eccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLH-MDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~v-lE~~~ 37 (328)
.++|.|||+|..|.+.|..|+++|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 36899999999999999999999999999 87753
No 354
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.96 E-value=0.018 Score=50.00 Aligned_cols=34 Identities=21% Similarity=0.152 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 355
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.96 E-value=0.044 Score=49.79 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=35.9
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhC--CCeEEEeccCCCCC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYG 40 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~~~~G 40 (328)
|+.++||+|||||++|++||..|.++ |.+|+|+|+++..+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 45679999999999999999999887 89999999998765
No 356
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=94.96 E-value=0.023 Score=48.00 Aligned_cols=35 Identities=26% Similarity=0.220 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
.+++|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 57999999999999999999999999999998776
No 357
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.96 E-value=0.024 Score=46.38 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|.|||+|..|.+.|..|+++|++|++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4689999999999999999999999999998854
No 358
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.92 E-value=0.022 Score=48.22 Aligned_cols=37 Identities=27% Similarity=0.256 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 5799999999999999999999999999999877654
No 359
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=94.91 E-value=0.019 Score=51.84 Aligned_cols=38 Identities=13% Similarity=0.134 Sum_probs=34.2
Q ss_pred cccEEEECCChhHHHHHHhhhhC-CCeEEEeccCCCCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGG 41 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~-G~~V~vlE~~~~~GG 41 (328)
..+++|||+|.+|+-+|..|++. |.+|+++|+++++..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~ 197 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP 197 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc
Confidence 35899999999999999999999 999999999886544
No 360
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.89 E-value=0.029 Score=47.56 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 361
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.87 E-value=0.025 Score=47.30 Aligned_cols=33 Identities=9% Similarity=-0.063 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.+|+|||+|.+|+-+|..|++.| +|+++++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 57999999999999999999999 9999998765
No 362
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.86 E-value=0.024 Score=50.24 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=31.7
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+.+|+|||.|-.|...|..|.+.|++|+|+|.+.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35689999999999999999999999999999864
No 363
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.81 E-value=0.03 Score=47.66 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+++|||+|.+|+-+|..|++.|.+|+++++++.+.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~ 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc
Confidence 4799999999999999999999999999999887643
No 364
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.77 E-value=0.028 Score=44.88 Aligned_cols=33 Identities=33% Similarity=0.297 Sum_probs=30.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
..+|.|||+|..|...|..|++.|++|++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 368999999999999999999999999999875
No 365
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.77 E-value=0.012 Score=47.40 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
.++|.|||.|..|.+.|..|+++|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 478999999999999999999999999999875
No 366
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.75 E-value=0.033 Score=47.49 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=31.6
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
+..+|+|||+|..|.+.|+.|++.|. +|.++|.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 35689999999999999999999988 999999865
No 367
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.74 E-value=0.023 Score=49.20 Aligned_cols=33 Identities=30% Similarity=0.404 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
+.+|+|+|+|.+|..+|..|...|. +|++++++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5789999999999999999999997 89999997
No 368
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.74 E-value=0.03 Score=47.48 Aligned_cols=33 Identities=15% Similarity=0.346 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
.+|+|||+|-.|.+.|+.|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 489999999999999999999997 999999764
No 369
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=94.73 E-value=0.025 Score=48.23 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=32.3
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
|.+..+|+|||+|-.|.+.|+.|+..+. ++.++|.+
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 5667899999999999999999999886 89999974
No 370
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.72 E-value=0.026 Score=48.08 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=30.5
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
..++|+|||+|-.|.+.|+.|+..|. +|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45799999999999999999999884 89999874
No 371
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.71 E-value=0.022 Score=47.80 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
+|.|||.|..|...|..|+++|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 799999999999999999999999999998753
No 372
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.71 E-value=0.031 Score=44.44 Aligned_cols=31 Identities=29% Similarity=0.228 Sum_probs=29.1
Q ss_pred cEEEEC-CChhHHHHHHhhhhCCCeEEEeccC
Q 020312 6 DVIVLG-TGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 6 dvvIvG-~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
+|+||| +|..|...|..|+++|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999 9999999999999999999999875
No 373
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.63 E-value=0.019 Score=46.56 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=29.8
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+..++|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99999854
No 374
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=94.59 E-value=0.024 Score=50.13 Aligned_cols=30 Identities=37% Similarity=0.464 Sum_probs=28.1
Q ss_pred ccEEEECCChhHHHHHHhhhh-CCCeEEEec
Q 020312 5 YDVIVLGTGLKECILSGLLSV-DGLKVLHMD 34 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~-~G~~V~vlE 34 (328)
++|+|||+|..|.+.|..|++ +|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 599999998
No 375
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.54 E-value=0.026 Score=48.12 Aligned_cols=31 Identities=16% Similarity=0.277 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
+|+|||+|..|.+.|..|++.|+ +|++++++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 69999999999999999999999 99999985
No 376
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.47 E-value=0.031 Score=49.69 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
.+|+|||.|-.||..|..|+++|++|+.+|-+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 58999999999999999999999999999875
No 377
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.44 E-value=0.028 Score=47.75 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
.++|.|||.|..|...|..|+++|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3689999999999999999999999 99999985
No 378
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.42 E-value=0.02 Score=49.55 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCC-------CeEEEeccCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDG-------LKVLHMDRNDY 38 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G-------~~V~vlE~~~~ 38 (328)
.++|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999999 99999998765
No 379
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.38 E-value=0.035 Score=46.84 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||.|..|...|..|+++|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999998863
No 380
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=94.38 E-value=0.12 Score=47.33 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHhhhh------------CCCeEEEeccCCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSV------------DGLKVLHMDRNDY 38 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~------------~G~~V~vlE~~~~ 38 (328)
..+||+|||||++|+++|..|++ +|.+|+|+|+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 36899999999999999999999 9999999999764
No 381
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.36 E-value=0.036 Score=46.69 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||+|..|...|..|++.|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999998853
No 382
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.33 E-value=0.038 Score=45.52 Aligned_cols=35 Identities=9% Similarity=0.072 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCC----CeEEEeccCCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDG----LKVLHMDRNDY 38 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G----~~V~vlE~~~~ 38 (328)
.++|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 568999999999999999999999 79999998754
No 383
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.32 E-value=0.032 Score=46.87 Aligned_cols=33 Identities=9% Similarity=0.004 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC--eEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~ 37 (328)
++|+|||+|..|.+.|+.|++.|+ +|.++|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 379999999999999999999998 999999854
No 384
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.29 E-value=0.039 Score=49.91 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=31.2
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
.+.+|.|||.|..|...|..|+++|++|++++++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3578999999999999999999999999999885
No 385
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.27 E-value=0.087 Score=45.14 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=43.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEecCceEEcCEEEECCCC
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~~g~~~~ad~vV~~~~~ 287 (328)
..+.+.+.+.+++.|++++++++|++|..+ ++.+.+|+++++++.||+||++.+.
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGRQWLARAVISATGT 130 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCCEEEeCEEEECCCC
Confidence 346666677788889999999999999987 6664437775559999999987664
No 386
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.27 E-value=0.035 Score=52.91 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 387
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.26 E-value=0.033 Score=47.22 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHhhhhCC--CeEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDG--LKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G--~~V~vlE~~~ 37 (328)
+|+|||+|..|.+.|..|+++| ++|++++++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 7999999999999999999999 7999999853
No 388
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.25 E-value=0.038 Score=49.72 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHhhh--------------------hCCC-eEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLS--------------------VDGL-KVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~--------------------~~G~-~V~vlE~~~~~ 39 (328)
..|+|||+|.+|+=+|..|+ +.|. +|+|+++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 57999999999999999999 5686 79999986643
No 389
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.25 E-value=0.033 Score=50.38 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHhhhhC--CCeEEEeccC
Q 020312 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRN 36 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~ 36 (328)
++|.|||.|..|+..|..|+++ |++|++++++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5899999999999999999998 7999999875
No 390
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.16 E-value=0.037 Score=45.62 Aligned_cols=31 Identities=26% Similarity=0.437 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHhhhhCC-CeEEEeccC
Q 020312 6 DVIVLGTGLKECILSGLLSVDG-LKVLHMDRN 36 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G-~~V~vlE~~ 36 (328)
+|.|||+|..|...|..|++.| ++|++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 6999999999999999999999 999999885
No 391
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.11 E-value=0.048 Score=49.17 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..++|.|||.|..|...|..|+++|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999875
No 392
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.11 E-value=0.04 Score=48.91 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+..|||.|..|+..|..|+++|++|++++++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 578899999999999999999999999999864
No 393
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.10 E-value=0.043 Score=46.76 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCC-CeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDG-LKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G-~~V~vlE~~~ 37 (328)
++|.|||.|..|...|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999874
No 394
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.10 E-value=0.047 Score=45.46 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998753
No 395
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.08 E-value=0.042 Score=43.99 Aligned_cols=37 Identities=19% Similarity=0.333 Sum_probs=31.4
Q ss_pred CCCcccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
|...+.|+|.|| |..|...+.+|.++|++|.++.++.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 555568999996 9999999999999999999998864
No 396
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.01 E-value=0.04 Score=52.74 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=32.6
Q ss_pred ccEEEEC--CChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLG--TGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG--~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
.+|+||| ||.+|+-+|..|++.|.+|+|+|+++ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 4799999 99999999999999999999999987 543
No 397
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.00 E-value=0.058 Score=42.27 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=30.4
Q ss_pred ccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+.|+|+|| |-.|...+.+|.++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 67999998 9999999999999999999998854
No 398
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.00 E-value=0.06 Score=45.02 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=30.5
Q ss_pred ccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||+ |..|...|..|+++|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 48999999 9999999999999999999999753
No 399
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.97 E-value=0.044 Score=46.52 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC--eEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~ 37 (328)
++|+|||+|..|.++|+.|++.|. +|.++|.+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999986 999999865
No 400
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.96 E-value=0.051 Score=45.66 Aligned_cols=32 Identities=19% Similarity=0.123 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 401
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.95 E-value=0.057 Score=44.81 Aligned_cols=33 Identities=15% Similarity=0.070 Sum_probs=30.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
...++|+|+|-.|..+|..|++.|.+|+|+.++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999874
No 402
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.94 E-value=0.06 Score=45.74 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC--eEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~ 37 (328)
.+|.|||.|..|.+.|..|+++|+ +|++++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 589999999999999999999999 999999864
No 403
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.93 E-value=0.058 Score=44.96 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+.|+|.|+|..|...+..|.++|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4589999999999999999999999999998874
No 404
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.89 E-value=0.041 Score=45.07 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
..+|+|||+|-.|..+|..|++.|. +++|++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3589999999999999999999996 899999854
No 405
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.83 E-value=0.06 Score=45.39 Aligned_cols=33 Identities=21% Similarity=0.462 Sum_probs=30.5
Q ss_pred ccEEEEC-CChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLG-TGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG-~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.||| .|..|.+.|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3799999 99999999999999999999998765
No 406
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.83 E-value=0.058 Score=48.71 Aligned_cols=33 Identities=18% Similarity=0.157 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
+.+|.|||.|..|...|..|+++|++|++++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 578999999999999999999999999999885
No 407
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.81 E-value=0.054 Score=46.16 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
..+|+|||+|..|.++|+.|++.|. +|.++|.+
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 3689999999999999999999997 89999974
No 408
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.79 E-value=0.059 Score=47.50 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
...|+|+|+|.+|+.+|..|...|.+|++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999854
No 409
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.76 E-value=0.053 Score=47.07 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..|+|+|+|.+|+.+|..|+..|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999998853
No 410
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.73 E-value=0.13 Score=46.30 Aligned_cols=42 Identities=24% Similarity=0.366 Sum_probs=37.1
Q ss_pred CCcccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCCcc
Q 020312 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (328)
Q Consensus 2 ~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 43 (328)
+++|||+|||||++|++||.+|+++|++|+|+|+++.+||..
T Consensus 1 ~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 1 SQKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 357999999999999999999999999999999998555543
No 411
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.70 E-value=0.035 Score=54.86 Aligned_cols=37 Identities=19% Similarity=0.070 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG 41 (328)
..|+|||+|..|+-+|..|++.|.+|+|+|+++.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4799999999999999999999999999999887643
No 412
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.69 E-value=0.057 Score=48.50 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
...|+|||+|-+|...|..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 467999999999999999999999999999974
No 413
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.68 E-value=0.066 Score=46.94 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|+|+|+|..|+.+|..|...|.+|++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999864
No 414
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.68 E-value=0.067 Score=44.20 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..++|||+|-+|-++|+.|++.|.+|+|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998753
No 415
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=93.68 E-value=0.049 Score=46.60 Aligned_cols=36 Identities=17% Similarity=0.128 Sum_probs=32.4
Q ss_pred CCCcccEEEECC-ChhHHHHHHhhhhCCC-------eEEEeccC
Q 020312 1 MDEEYDVIVLGT-GLKECILSGLLSVDGL-------KVLHMDRN 36 (328)
Q Consensus 1 ~~~~~dvvIvG~-G~aGl~aA~~L~~~G~-------~V~vlE~~ 36 (328)
|...++|+|+|| |..|...+..|.++|+ +|.+++..
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 677789999998 9999999999999996 89999874
No 416
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.66 E-value=0.061 Score=44.74 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|+|.|+|..|...+..|.++|++|+++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999998864
No 417
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.66 E-value=0.041 Score=48.04 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCC-------CeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDG-------LKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G-------~~V~vlE~~~~ 38 (328)
++|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998754
No 418
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.65 E-value=0.062 Score=48.64 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999853
No 419
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.63 E-value=0.073 Score=44.40 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC---eEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL---KVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~---~V~vlE~~~ 37 (328)
..+|.|||+|.-|.+.|..|.++|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 5789999999999999999999998 999999864
No 420
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.61 E-value=0.055 Score=45.60 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=27.5
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+|.+||-|..|...|..|.++|++|++++++.
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 69999999999999999999999999999864
No 421
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=93.59 E-value=0.045 Score=52.07 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999864
No 422
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.54 E-value=0.062 Score=48.57 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
++|.|||+|..|...|..|+++|++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999885
No 423
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.53 E-value=0.057 Score=45.59 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC--eEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~~ 38 (328)
.+|+|||+|..|.++|+.|+.+|. +|.++|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 689999999999999999999998 9999998763
No 424
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.51 E-value=0.074 Score=42.20 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=29.3
Q ss_pred cEEEECC-ChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 6 DVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+|+|.|| |..|...+.+|.++|++|+++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999998863
No 425
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=93.51 E-value=0.059 Score=51.27 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||+|..|...|+.++++|++|+++|.+.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 479999999999999999999999999999864
No 426
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.50 E-value=0.078 Score=45.53 Aligned_cols=34 Identities=26% Similarity=0.263 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|.|||.|..|.+.|..|+++|++|++++++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999999864
No 427
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.46 E-value=0.074 Score=46.13 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.|+|||||..|..+|+.+.+.|++|++++.+..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 699999999999999999999999999998653
No 428
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.42 E-value=0.083 Score=43.09 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCC----eEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGL----KVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~----~V~vlE~~~ 37 (328)
++|.|||+|..|.+.|..|.++|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999863
No 429
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.42 E-value=0.083 Score=45.11 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
..+|+|||+|..|.++|+.|+.+|. ++.++|.+
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 4689999999999999999999997 89999974
No 430
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.40 E-value=0.086 Score=44.19 Aligned_cols=35 Identities=29% Similarity=0.322 Sum_probs=31.3
Q ss_pred ccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCCCC
Q 020312 5 YDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~~~ 39 (328)
|+|+|.|| |..|-..+.+|.++|++|+++-|++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 46999998 999999999999999999999876543
No 431
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.40 E-value=0.07 Score=45.36 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=29.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
..+|+|||+|..|.+.|+.|++.|. +|.++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3689999999999999999998885 89999985
No 432
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.38 E-value=0.072 Score=44.47 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+|.|||+|..|...|..|++ |++|++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999998864
No 433
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.38 E-value=0.062 Score=53.45 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHhhhhCCC-eEEEeccCCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDY 38 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~~ 38 (328)
+|+|||||.+|+=+|..|++.|. +|+|++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 89999999999999999999995 8999999863
No 434
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.37 E-value=0.076 Score=46.26 Aligned_cols=34 Identities=24% Similarity=0.246 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999753
No 435
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.36 E-value=0.063 Score=48.79 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHH-HHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECI-LSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~-aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||.|-+|++ +|..|.++|++|++.|.+.
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 57999999999997 6999999999999999764
No 436
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=93.32 E-value=0.065 Score=44.24 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCe-EEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLK-VLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~-V~vlE~~~ 37 (328)
.++|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 36899999999999999999999999 89998753
No 437
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=93.31 E-value=0.083 Score=43.38 Aligned_cols=33 Identities=9% Similarity=0.077 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||.|..|...|..|.+.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 589999999999999999999999999998863
No 438
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=93.31 E-value=0.084 Score=44.66 Aligned_cols=33 Identities=30% Similarity=0.384 Sum_probs=29.1
Q ss_pred cccEEEECCC-hhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTG-LKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G-~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
..+++|||+| +.|..+|.+|...|..|+|++++
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 3589999999 67999999999999999988663
No 439
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.26 E-value=0.087 Score=45.24 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=29.6
Q ss_pred cccEEEECC-ChhHHHHHHhhhhCC--CeEEEeccC
Q 020312 4 EYDVIVLGT-GLKECILSGLLSVDG--LKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~-G~aGl~aA~~L~~~G--~~V~vlE~~ 36 (328)
..+|+|||+ |-.|.++|+.|+..| .+|+++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 468999997 999999999999998 489999974
No 440
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.25 E-value=0.083 Score=42.08 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=29.0
Q ss_pred cEEEECC-ChhHHHHHHhhhhCCCeEEEeccC
Q 020312 6 DVIVLGT-GLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 6 dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
+|+|.|| |-.|...|..|.++|++|+++.++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 5999998 999999999999999999999875
No 441
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=93.25 E-value=0.26 Score=42.98 Aligned_cols=57 Identities=16% Similarity=0.232 Sum_probs=42.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEE--ecCc--eEEcCEEEECCCCCc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT--SEGE--TAKCKKVVCDPSYLP 289 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~--~~g~--~~~ad~vV~~~~~~~ 289 (328)
..+.+.|.+.+.+.|++++++++|++|..++++.+ .|+ .+|+ +++||.||.+-+..+
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCc
Confidence 34677788888888999999999999998622333 333 3666 699999998766543
No 442
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.24 E-value=0.08 Score=48.05 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 443
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=93.23 E-value=0.06 Score=44.73 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=30.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
...++|+|+|-+|.++|..|++.|.+|+|+.|+
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 357999999999999999999999999999874
No 444
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.23 E-value=0.075 Score=45.29 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=30.1
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
..+|+|||+|..|.++|+.|++.|. ++.++|.+
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 4689999999999999999999987 89999974
No 445
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=93.19 E-value=0.062 Score=46.81 Aligned_cols=39 Identities=26% Similarity=0.393 Sum_probs=34.1
Q ss_pred cccEEEECC-ChhHHHHHHhhhhCCC---eEEEeccCC-CCCCc
Q 020312 4 EYDVIVLGT-GLKECILSGLLSVDGL---KVLHMDRND-YYGGE 42 (328)
Q Consensus 4 ~~dvvIvG~-G~aGl~aA~~L~~~G~---~V~vlE~~~-~~GG~ 42 (328)
..+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 468999999 9999999999999997 999999975 44664
No 446
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=93.14 E-value=0.075 Score=43.79 Aligned_cols=30 Identities=23% Similarity=0.227 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEecc
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDR 35 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~ 35 (328)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 689999999999999999999999999866
No 447
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.13 E-value=0.087 Score=50.02 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=34.1
Q ss_pred ccEEEEC--CChhHHHHHHhhhhCCCeEEEeccCCCCCCc
Q 020312 5 YDVIVLG--TGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 5 ~dvvIvG--~G~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 42 (328)
.+|+||| +|.+|+-+|..|++.|.+|+++++.+.+...
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~ 563 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW 563 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc
Confidence 4699999 9999999999999999999999998876553
No 448
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.09 E-value=0.089 Score=43.79 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHhhhhCCC--eEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~~ 37 (328)
+|.|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 999998853
No 449
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.05 E-value=0.1 Score=43.98 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=29.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
...++|||+|-+|..+|..|++.|. +|+|+.++
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3579999999999999999999997 99999874
No 450
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=93.01 E-value=0.091 Score=44.62 Aligned_cols=33 Identities=30% Similarity=0.182 Sum_probs=29.9
Q ss_pred ccEEEECC-ChhHHHHHHhhhhCC--CeEEEeccCC
Q 020312 5 YDVIVLGT-GLKECILSGLLSVDG--LKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~-G~aGl~aA~~L~~~G--~~V~vlE~~~ 37 (328)
++|+|||+ |-.|.+.|..|++.| .+|.++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 37999998 999999999999998 7899998865
No 451
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.99 E-value=0.15 Score=46.12 Aligned_cols=43 Identities=26% Similarity=0.370 Sum_probs=36.7
Q ss_pred CcccEEEECCChhHHHHHHhhhhCCCeEEEeccC-------C--CCCCcccc
Q 020312 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN-------D--YYGGESSS 45 (328)
Q Consensus 3 ~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~-------~--~~GG~~~s 45 (328)
.++||+|||||++|++||.+|+++|++|+|+|+. + .+||.|..
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~ 59 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVN 59 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecc
Confidence 4699999999999999999999999999999942 1 37887643
No 452
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=92.97 E-value=0.11 Score=45.89 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=34.1
Q ss_pred cEEEECCChhHHHHHHhhhh---CCCeEEEeccCCCCCCc
Q 020312 6 DVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDYYGGE 42 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~---~G~~V~vlE~~~~~GG~ 42 (328)
||+|||||++||++|.+|++ .|++|+|+|+++..+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~ 42 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR 42 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec
Confidence 89999999999999999999 89999999999876544
No 453
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=92.90 E-value=0.12 Score=44.08 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=32.9
Q ss_pred CCCcccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 1 ~~~~~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
|+....|+|.|| |-.|...|..|+++|++|+++.++..
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 555678999996 89999999999999999999987643
No 454
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.86 E-value=0.068 Score=44.82 Aligned_cols=32 Identities=13% Similarity=0.112 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 479999999999999999999999999998 53
No 455
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=92.86 E-value=0.089 Score=47.26 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHhhhhC--------------------C-CeEEEeccCCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVD--------------------G-LKVLHMDRNDYY 39 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~--------------------G-~~V~vlE~~~~~ 39 (328)
-.|+|||+|.+|+-+|..|++. | .+|+|+++++..
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 4799999999999999999974 5 599999997654
No 456
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.84 E-value=0.1 Score=42.10 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=30.8
Q ss_pred cccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+.|+|.|| |-.|...|.+|.++|++|+++.++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 468999998 9999999999999999999998853
No 457
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=92.83 E-value=0.31 Score=42.34 Aligned_cols=53 Identities=17% Similarity=0.162 Sum_probs=42.6
Q ss_pred CcHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCc
Q 020312 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (328)
Q Consensus 232 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~ 289 (328)
..+.+.|.+.+++.|++++++++|++|+.+ + .|++ +|++++||.||.+.+..+
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~---~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADPV--G---RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEETT--T---EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEeC--C---EEEECCCCEEEcCEEEECCCccH
Confidence 457778888888889999999999999863 3 3455 777899999998877654
No 458
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.66 E-value=0.09 Score=43.70 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
..+++|||+|..|.+.|..|.+.|.+|++++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999875
No 459
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.60 E-value=0.12 Score=43.33 Aligned_cols=31 Identities=16% Similarity=0.324 Sum_probs=28.4
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
..++|+|+|-.|.++|..|++.| +|+|..++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 56999999999999999999999 99999774
No 460
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.57 E-value=0.085 Score=45.13 Aligned_cols=36 Identities=17% Similarity=0.107 Sum_probs=30.2
Q ss_pred CCC-cccEEEECC-ChhHHHHHHhhhhCCC-------eEEEeccC
Q 020312 1 MDE-EYDVIVLGT-GLKECILSGLLSVDGL-------KVLHMDRN 36 (328)
Q Consensus 1 ~~~-~~dvvIvG~-G~aGl~aA~~L~~~G~-------~V~vlE~~ 36 (328)
|++ .++|+|+|| |-.|.+.|..|++.|. +|.+++..
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 544 579999998 9999999999999885 89999875
No 461
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.55 E-value=0.12 Score=43.46 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=31.8
Q ss_pred CCCcccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
|+....|+|+|| |-.|...+..|.++|++|.++.|+.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 554568999997 9999999999999999999998864
No 462
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.52 E-value=0.13 Score=43.18 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=31.7
Q ss_pred CCCcccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
|.....|+|+|| |-.|...+..|.++|++|.++.|+.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 544567999998 9999999999999999999998864
No 463
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.44 E-value=0.12 Score=43.58 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.7
Q ss_pred cccEEEECC-ChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 4 EYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 4 ~~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
...|+|.|| |..|...+.+|.++|++|+++.++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 468999999 99999999999999999999988654
No 464
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.39 E-value=0.11 Score=44.25 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=29.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC--eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~--~V~vlE~~ 36 (328)
+.+|+|||+|-.|.+.|+.|+..+. ++.++|.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4799999999999999999998885 89999974
No 465
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.38 E-value=0.13 Score=44.98 Aligned_cols=34 Identities=26% Similarity=0.281 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999753
No 466
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=92.35 E-value=0.14 Score=45.83 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
...++|+|+|..|..+|..|+..|.+|++.|.+.
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4578999999999999999999999999998753
No 467
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.34 E-value=0.13 Score=44.17 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..|.|||.|..|.+.|..|++.|++|++.+++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 579999999999999999999999999998864
No 468
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.34 E-value=0.14 Score=41.99 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
.++|||+|-+|-++|+.|.+.|. +|+|+.|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 79999999999999999999997 89999885
No 469
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.32 E-value=0.11 Score=43.18 Aligned_cols=34 Identities=15% Similarity=0.076 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
...++|+|+|-+|-++|..|++.|. +|+|+.|+.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999997 899998754
No 470
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.20 E-value=0.11 Score=43.48 Aligned_cols=33 Identities=9% Similarity=0.004 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCC--CeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDG--LKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G--~~V~vlE~~~ 37 (328)
++|+|||+|-.|.++|+.|+.+| -++.++|...
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 47999999999999999999887 4799999753
No 471
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.18 E-value=0.14 Score=46.37 Aligned_cols=50 Identities=18% Similarity=0.149 Sum_probs=40.8
Q ss_pred HHHHHcCcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCcch
Q 020312 240 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPNK 291 (328)
Q Consensus 240 ~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~~~ 291 (328)
+.++++|+++++++.|++|..+ +++..+++ +++++.||.||++++..|+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~ 315 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRRPDI 315 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEEECC
T ss_pred HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcCcCc
Confidence 5677889999999999999865 34555666 77899999999999987763
No 472
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=92.17 E-value=0.1 Score=48.04 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 579999999999999999999999999999865
No 473
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=92.15 E-value=0.15 Score=44.86 Aligned_cols=34 Identities=26% Similarity=0.174 Sum_probs=31.6
Q ss_pred CCCcccEEEECCChhHHHHHHhhhhCCCeEEEec
Q 020312 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMD 34 (328)
Q Consensus 1 ~~~~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE 34 (328)
|++...|.|+|||-.|...+..+.+.|++|.+++
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 5667799999999999999999999999999999
No 474
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=92.11 E-value=0.13 Score=46.56 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHH-HHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECI-LSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~-aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||-|-+|++ +|..|.+.|++|++.|...
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 53 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 53 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCC
Confidence 46999999999998 8899999999999999854
No 475
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=92.09 E-value=0.12 Score=43.81 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHhhhhCCC-eEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~~ 37 (328)
+|+|||+|..|.+.|+.|+..|+ +|.++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999888 699999863
No 476
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=92.08 E-value=0.3 Score=45.63 Aligned_cols=55 Identities=15% Similarity=0.143 Sum_probs=43.7
Q ss_pred cHHHHHHHHHHHc-CcEEEcCcceeEEEecCCCcEEEEEe-cCceEEcCEEEECCCCCc
Q 020312 233 ELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (328)
Q Consensus 233 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~~v~~-~g~~~~ad~vV~~~~~~~ 289 (328)
.+.+.+.+.+++. |++++ +..|++|..+ ++.+.+|.+ +|+++.||.||.+.+..+
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 4667777777774 99985 5699999988 788888887 778999999998776543
No 477
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.02 E-value=0.12 Score=43.19 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=29.5
Q ss_pred cccEEEECCChhHHHHHHhhhhC--CCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~--G~~V~vlE~~ 36 (328)
.++|.|||+|..|.+.|..|++. |++|++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 35799999999999999999988 6899999875
No 478
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=91.98 E-value=0.11 Score=44.63 Aligned_cols=32 Identities=9% Similarity=0.030 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.+++|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~ 147 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 147 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGG
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCCh
Confidence 479999999999999999999999 99999865
No 479
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.98 E-value=0.12 Score=44.16 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=30.2
Q ss_pred cccEEEEC-CChhHHHHHHhhhhCC--CeEEEeccCC
Q 020312 4 EYDVIVLG-TGLKECILSGLLSVDG--LKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG-~G~aGl~aA~~L~~~G--~~V~vlE~~~ 37 (328)
.++|+|+| +|..|.+.|..|++.| .+|.+++...
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 46899999 7999999999999999 8999998654
No 480
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.90 E-value=0.18 Score=40.09 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=28.1
Q ss_pred EEEECC-ChhHHHHHHhhh-hCCCeEEEeccCC
Q 020312 7 VIVLGT-GLKECILSGLLS-VDGLKVLHMDRND 37 (328)
Q Consensus 7 vvIvG~-G~aGl~aA~~L~-~~G~~V~vlE~~~ 37 (328)
|+|.|| |-.|...|..|+ ++|++|+++.++.
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 999995 899999999999 8999999998853
No 481
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.84 E-value=0.3 Score=44.84 Aligned_cols=40 Identities=28% Similarity=0.370 Sum_probs=36.0
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC--------CCCCCcc
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN--------DYYGGES 43 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~--------~~~GG~~ 43 (328)
+||++|||||.+|++||.++++.|.+|+|+|+. ..+||.|
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtC 89 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTC 89 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcc
Confidence 489999999999999999999999999999974 3578865
No 482
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.84 E-value=0.14 Score=47.24 Aligned_cols=34 Identities=18% Similarity=0.405 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHhhhhCCCeEEEeccCCC
Q 020312 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (328)
Q Consensus 5 ~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~~ 38 (328)
.+++|+|+|-.|...|..|.+.|++|+++|++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 5799999999999999999999999999999765
No 483
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.84 E-value=0.17 Score=42.63 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
...|.|||+|..|..+|..|...|.+|++++++
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 357999999999999999999999999999975
No 484
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.71 E-value=0.18 Score=42.04 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=29.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
...++|+|+|-+|-++|+.|++.|. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4579999999999999999999997 89999774
No 485
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.67 E-value=0.17 Score=41.71 Aligned_cols=31 Identities=29% Similarity=0.343 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
+++|||+|-.|...|..|.+.|.+|++++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999875
No 486
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=90.93 E-value=0.033 Score=44.00 Aligned_cols=34 Identities=26% Similarity=0.156 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
.++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 3579999999999999999999999999998754
No 487
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=91.62 E-value=0.17 Score=40.15 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=29.2
Q ss_pred cEEEEC-CChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 6 DVIVLG-TGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG-~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+|+|.| +|..|...+..|.++|++|+++.++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 699999 59999999999999999999998864
No 488
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=91.59 E-value=0.2 Score=41.52 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=29.3
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
...++|+|+|-+|.++|+.|++.|. +|+|+.|+
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3579999999999999999999995 99999774
No 489
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=91.56 E-value=0.2 Score=41.79 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=29.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
...++|+|+|-+|-++|..|++.|. +|+|+.|+
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999997 79999774
No 490
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.54 E-value=0.19 Score=42.53 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=29.7
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
...++|+|+|-+|-++|..|++.|. +|+|+.|+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999997 89999875
No 491
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=91.53 E-value=0.2 Score=41.69 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=29.5
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
...++|+|+|-+|-++|..|++.|. +|+|+.|+
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 4579999999999999999999995 99999874
No 492
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.47 E-value=0.2 Score=42.07 Aligned_cols=33 Identities=27% Similarity=0.228 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~ 36 (328)
...|.|||.|..|..+|..|...|.+|++++++
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 357999999999999999999999999999975
No 493
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=91.47 E-value=0.14 Score=46.25 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHH-HHHhhhhCCCeEEEeccCC
Q 020312 5 YDVIVLGTGLKECI-LSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 5 ~dvvIvG~G~aGl~-aA~~L~~~G~~V~vlE~~~ 37 (328)
.+|.|||-|-+|++ +|..|.++|++|++.|...
T Consensus 19 ~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~ 52 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNEGYQISGSDIAD 52 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCC
T ss_pred CEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCC
Confidence 46999999999998 8899999999999999854
No 494
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.34 E-value=0.21 Score=45.02 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
...|+|||.|..|..+|..|...|.+|+++|.+.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999754
No 495
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=91.33 E-value=0.2 Score=41.80 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=28.7
Q ss_pred cccEEEECC-ChhHHHHHHhhhhCCCeEEEecc
Q 020312 4 EYDVIVLGT-GLKECILSGLLSVDGLKVLHMDR 35 (328)
Q Consensus 4 ~~dvvIvG~-G~aGl~aA~~L~~~G~~V~vlE~ 35 (328)
..+++|||. |+.|..+|..|.+.|..|+++.+
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~ 197 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHS 197 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 368999995 56899999999999999999986
No 496
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=91.26 E-value=0.44 Score=41.30 Aligned_cols=54 Identities=24% Similarity=0.397 Sum_probs=43.0
Q ss_pred cHHHHHHHHHHHcCcEEEcCcceeEEEecCCCcEEEEEe--cCc--eEEcCEEEECCCC
Q 020312 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGE--TAKCKKVVCDPSY 287 (328)
Q Consensus 233 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~~v~~--~g~--~~~ad~vV~~~~~ 287 (328)
.+-+.|++.+++.|++++++++|+++..+ ++.++++.. +++ +++||.||.+-+.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~ 160 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCcc
Confidence 45667778888899999999999999998 888777664 443 5889999876554
No 497
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=91.24 E-value=0.25 Score=41.28 Aligned_cols=32 Identities=16% Similarity=0.208 Sum_probs=29.1
Q ss_pred cccEEEECCC-hhHHHHHHhhhhCCCeEEEecc
Q 020312 4 EYDVIVLGTG-LKECILSGLLSVDGLKVLHMDR 35 (328)
Q Consensus 4 ~~dvvIvG~G-~aGl~aA~~L~~~G~~V~vlE~ 35 (328)
..+|+|||+| +.|..+|..|.+.|..|+++.+
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs 197 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS 197 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEEC
Confidence 4689999999 6899999999999999999964
No 498
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.15 E-value=0.21 Score=40.82 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=29.6
Q ss_pred cccEEEECCChhHHHHHHhhhhCCC-eEEEeccC
Q 020312 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (328)
Q Consensus 4 ~~dvvIvG~G~aGl~aA~~L~~~G~-~V~vlE~~ 36 (328)
..+|+|||+|-.|..+|..|+..|. +++|++..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4689999999999999999999995 78999874
No 499
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=91.00 E-value=0.19 Score=41.98 Aligned_cols=37 Identities=32% Similarity=0.403 Sum_probs=31.0
Q ss_pred CCCcccEEEECC-ChhHHHHHHhhhhCC-CeEEEeccCC
Q 020312 1 MDEEYDVIVLGT-GLKECILSGLLSVDG-LKVLHMDRND 37 (328)
Q Consensus 1 ~~~~~dvvIvG~-G~aGl~aA~~L~~~G-~~V~vlE~~~ 37 (328)
|+....|+|.|| |-.|...+.+|.++| ++|.++.++.
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCC
Confidence 444567999999 999999999999999 9999998864
No 500
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=90.97 E-value=0.23 Score=41.83 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHhhhhCCCeEEEeccCC
Q 020312 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (328)
Q Consensus 6 dvvIvG~G~aGl~aA~~L~~~G~~V~vlE~~~ 37 (328)
+|-+||-|.-|...|..|.++|++|++++++.
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 69999999999999999999999999999864
Done!